Query 013892
Match_columns 434
No_of_seqs 412 out of 3006
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 19:04:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tcm_A Alanine aminotransferas 100.0 4.6E-58 1.6E-62 474.2 41.7 382 50-431 17-398 (500)
2 3ihj_A Alanine aminotransferas 100.0 4.9E-57 1.7E-61 466.1 37.1 367 52-425 19-391 (498)
3 1b5p_A Protein (aspartate amin 100.0 4.4E-42 1.5E-46 342.8 29.7 303 60-425 3-310 (385)
4 3k7y_A Aspartate aminotransfer 100.0 7.8E-42 2.7E-46 343.3 30.7 287 97-423 29-333 (405)
5 3jtx_A Aminotransferase; NP_28 100.0 1E-39 3.5E-44 326.1 28.2 280 97-425 30-317 (396)
6 4h51_A Aspartate aminotransfer 100.0 2.9E-39 9.8E-44 325.2 29.2 316 62-425 18-351 (420)
7 4f4e_A Aromatic-amino-acid ami 100.0 9.7E-40 3.3E-44 329.7 25.4 288 97-425 49-355 (420)
8 3h14_A Aminotransferase, class 100.0 6.6E-39 2.2E-43 320.1 28.2 295 64-425 7-302 (391)
9 1j32_A Aspartate aminotransfer 100.0 2E-38 6.9E-43 316.1 29.5 306 61-425 3-310 (388)
10 7aat_A Aspartate aminotransfer 100.0 1.3E-38 4.5E-43 318.9 27.5 306 74-425 13-336 (401)
11 3ele_A Amino transferase; RER0 100.0 3.3E-38 1.1E-42 315.5 29.2 303 61-425 4-323 (398)
12 3dyd_A Tyrosine aminotransfera 100.0 1.1E-38 3.8E-43 322.8 25.8 286 95-425 52-343 (427)
13 2x5d_A Probable aminotransfera 100.0 2.2E-38 7.6E-43 318.7 27.3 306 61-425 10-318 (412)
14 3fvs_A Kynurenine--oxoglutarat 100.0 8.2E-39 2.8E-43 322.4 24.1 280 97-425 28-327 (422)
15 3b46_A Aminotransferase BNA3; 100.0 7E-39 2.4E-43 326.2 23.8 280 97-425 57-350 (447)
16 1o4s_A Aspartate aminotransfer 100.0 1.2E-37 4.1E-42 311.1 32.2 302 61-425 14-316 (389)
17 3t18_A Aminotransferase class 100.0 4.3E-38 1.5E-42 316.5 26.8 319 62-425 9-346 (413)
18 3fsl_A Aromatic-amino-acid ami 100.0 1E-37 3.4E-42 311.8 27.8 272 140-425 45-333 (397)
19 1gd9_A Aspartate aminotransfer 100.0 1.4E-37 4.6E-42 310.2 28.3 278 97-425 26-308 (389)
20 3ezs_A Aminotransferase ASPB; 100.0 4.6E-38 1.6E-42 312.0 24.3 275 98-423 24-301 (376)
21 3e2y_A Kynurenine-oxoglutarate 100.0 4.5E-38 1.5E-42 315.7 24.1 287 118-425 13-320 (410)
22 2dou_A Probable N-succinyldiam 100.0 6.5E-38 2.2E-42 311.2 24.9 276 97-425 25-303 (376)
23 3aow_A Putative uncharacterize 100.0 1.7E-37 5.7E-42 316.2 28.4 283 97-425 76-363 (448)
24 3meb_A Aspartate aminotransfer 100.0 2E-37 6.9E-42 315.6 28.9 313 66-425 26-371 (448)
25 1xi9_A Putative transaminase; 100.0 1.5E-37 5.2E-42 312.0 27.6 306 61-425 12-323 (406)
26 3rq1_A Aminotransferase class 100.0 3.4E-37 1.2E-41 310.5 29.5 305 76-425 24-348 (418)
27 3qgu_A LL-diaminopimelate amin 100.0 1.1E-37 3.8E-42 317.1 25.7 307 57-425 35-364 (449)
28 2o1b_A Aminotransferase, class 100.0 8.8E-38 3E-42 313.9 24.0 301 62-425 23-326 (404)
29 1u08_A Hypothetical aminotrans 100.0 3.1E-37 1.1E-41 307.4 27.2 277 97-425 30-309 (386)
30 1yiz_A Kynurenine aminotransfe 100.0 4.4E-37 1.5E-41 310.7 27.7 281 97-425 37-335 (429)
31 2o0r_A RV0858C (N-succinyldiam 100.0 6.1E-37 2.1E-41 308.1 26.1 277 98-425 26-306 (411)
32 4eu1_A Mitochondrial aspartate 100.0 3.5E-37 1.2E-41 309.7 21.8 309 62-425 17-344 (409)
33 2r2n_A Kynurenine/alpha-aminoa 100.0 1.2E-36 4E-41 307.6 25.8 248 161-425 72-340 (425)
34 3g0t_A Putative aminotransfera 100.0 9.8E-37 3.3E-41 308.6 25.1 281 97-425 44-354 (437)
35 2z61_A Probable aspartate amin 100.0 5.8E-36 2E-40 296.5 29.5 292 61-425 2-296 (370)
36 2zc0_A Alanine glyoxylate tran 100.0 2.3E-35 7.7E-40 295.8 33.8 310 61-425 7-322 (407)
37 2gb3_A Aspartate aminotransfer 100.0 2.1E-36 7.2E-41 304.1 26.0 303 57-425 12-317 (409)
38 3nra_A Aspartate aminotransfer 100.0 2.9E-36 9.8E-41 302.0 26.6 267 139-425 53-326 (407)
39 3ei9_A LL-diaminopimelate amin 100.0 2.4E-36 8.2E-41 305.7 25.3 306 57-425 22-352 (432)
40 3fdb_A Beta C-S lyase, putativ 100.0 3.5E-36 1.2E-40 298.4 25.4 259 139-425 36-297 (377)
41 1ajs_A Aspartate aminotransfer 100.0 3.8E-36 1.3E-40 302.2 24.9 293 97-426 30-345 (412)
42 3kax_A Aminotransferase, class 100.0 8.7E-36 3E-40 295.9 26.7 265 139-425 37-305 (383)
43 1vp4_A Aminotransferase, putat 100.0 9.3E-36 3.2E-40 301.0 27.0 268 140-425 59-334 (425)
44 3dzz_A Putative pyridoxal 5'-p 100.0 8.9E-36 3.1E-40 296.6 25.8 266 139-425 40-309 (391)
45 1iay_A ACC synthase 2, 1-amino 100.0 2.6E-35 8.9E-40 297.7 28.8 259 160-425 76-343 (428)
46 1yaa_A Aspartate aminotransfer 100.0 1.4E-35 4.8E-40 298.1 26.5 294 97-426 29-345 (412)
47 1c7n_A Cystalysin; transferase 100.0 1.3E-35 4.5E-40 296.8 25.4 265 139-424 44-312 (399)
48 1bw0_A TAT, protein (tyrosine 100.0 9.5E-36 3.2E-40 299.6 24.5 284 97-425 33-332 (416)
49 3get_A Histidinol-phosphate am 100.0 1.7E-35 5.8E-40 292.4 25.7 266 97-425 30-297 (365)
50 3asa_A LL-diaminopimelate amin 100.0 2.2E-35 7.6E-40 295.8 26.8 301 61-425 3-315 (400)
51 3ly1_A Putative histidinol-pho 100.0 2E-35 6.9E-40 290.6 26.0 255 139-425 29-283 (354)
52 2q7w_A Aspartate aminotransfer 100.0 1.7E-35 5.9E-40 295.4 25.8 274 140-426 45-333 (396)
53 1d2f_A MALY protein; aminotran 100.0 3.3E-35 1.1E-39 293.1 24.0 263 139-425 41-309 (390)
54 4dq6_A Putative pyridoxal phos 100.0 5.2E-35 1.8E-39 291.1 25.1 277 97-425 32-313 (391)
55 3l8a_A METC, putative aminotra 100.0 6.2E-35 2.1E-39 294.6 25.6 279 97-425 61-343 (421)
56 3d6k_A Putative aminotransfera 100.0 1.8E-35 6.2E-40 298.7 21.5 244 160-426 69-334 (422)
57 1v2d_A Glutamine aminotransfer 100.0 8.1E-35 2.8E-39 289.4 25.4 266 98-425 26-297 (381)
58 2zyj_A Alpha-aminodipate amino 100.0 5.2E-35 1.8E-39 292.5 24.1 276 97-425 32-311 (397)
59 3ffh_A Histidinol-phosphate am 100.0 7.2E-35 2.5E-39 287.7 23.9 263 97-424 32-294 (363)
60 2x5f_A Aspartate_tyrosine_phen 100.0 1.4E-35 4.8E-40 299.9 18.8 252 160-423 81-352 (430)
61 2ay1_A Aroat, aromatic amino a 100.0 2.1E-34 7.1E-39 287.6 26.7 290 97-426 26-330 (394)
62 3piu_A 1-aminocyclopropane-1-c 100.0 3.2E-34 1.1E-38 290.4 27.5 258 161-425 80-348 (435)
63 3ppl_A Aspartate aminotransfer 100.0 3.9E-35 1.3E-39 296.5 19.7 244 160-426 71-336 (427)
64 3ez1_A Aminotransferase MOCR f 100.0 1.5E-34 5.1E-39 291.6 20.1 279 97-425 25-329 (423)
65 1fg7_A Histidinol phosphate am 100.0 9.8E-34 3.4E-38 279.6 22.8 232 160-425 52-286 (356)
66 3euc_A Histidinol-phosphate am 100.0 2.7E-33 9.1E-38 276.9 25.7 252 139-425 43-296 (367)
67 1lc5_A COBD, L-threonine-O-3-p 100.0 3.7E-33 1.3E-37 275.9 26.1 250 139-425 37-287 (364)
68 2zy4_A L-aspartate beta-decarb 100.0 2.3E-34 8E-39 299.5 17.4 265 130-423 106-428 (546)
69 3cq5_A Histidinol-phosphate am 100.0 8.9E-33 3E-37 273.8 27.8 259 139-425 43-301 (369)
70 3op7_A Aminotransferase class 100.0 4.3E-33 1.5E-37 276.2 23.7 237 160-424 56-294 (375)
71 3ftb_A Histidinol-phosphate am 100.0 8E-33 2.7E-37 272.5 24.9 248 139-425 39-286 (361)
72 3f6t_A Aspartate aminotransfer 100.0 6.6E-34 2.3E-38 295.6 16.8 266 130-423 105-431 (533)
73 3b1d_A Betac-S lyase; HET: PLP 100.0 4.4E-36 1.5E-40 300.0 0.0 278 97-424 31-312 (392)
74 3g7q_A Valine-pyruvate aminotr 100.0 5E-33 1.7E-37 279.5 20.7 277 97-425 31-325 (417)
75 3if2_A Aminotransferase; YP_26 100.0 4.6E-33 1.6E-37 282.5 20.0 246 161-425 77-351 (444)
76 3p1t_A Putative histidinol-pho 100.0 6.1E-32 2.1E-36 263.7 24.3 241 138-425 28-268 (337)
77 3hdo_A Histidinol-phosphate am 100.0 9.5E-32 3.3E-36 265.3 24.2 259 97-425 26-284 (360)
78 3fkd_A L-threonine-O-3-phospha 100.0 1.9E-31 6.6E-36 262.0 22.2 238 139-425 28-267 (350)
79 1uu1_A Histidinol-phosphate am 100.0 6.6E-32 2.3E-36 264.0 18.7 241 139-425 32-272 (335)
80 3bwn_A AT1G70560, L-tryptophan 100.0 4.1E-33 1.4E-37 278.9 10.2 224 160-425 56-301 (391)
81 2hox_A ALLIIN lyase 1; cystein 100.0 3.1E-31 1.1E-35 268.3 7.1 241 141-425 71-336 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 1.8E-28 6.2E-33 245.0 26.5 265 129-425 44-314 (398)
83 1e5e_A MGL, methionine gamma-l 100.0 3.7E-27 1.3E-31 236.6 22.6 217 160-425 53-281 (404)
84 3tqx_A 2-amino-3-ketobutyrate 100.0 1.7E-26 5.7E-31 230.2 27.1 266 128-425 43-318 (399)
85 1vjo_A Alanine--glyoxylate ami 100.0 1.7E-27 5.8E-32 237.2 19.6 258 126-425 31-314 (393)
86 1t3i_A Probable cysteine desul 99.9 6.5E-27 2.2E-31 234.6 20.5 249 139-425 39-324 (420)
87 1fc4_A 2-amino-3-ketobutyrate 99.9 1.7E-26 5.7E-31 230.8 23.1 266 127-425 44-319 (401)
88 2dr1_A PH1308 protein, 386AA l 99.9 2.1E-26 7.3E-31 228.3 23.2 250 136-425 27-300 (386)
89 1bs0_A Protein (8-amino-7-oxon 99.9 8.5E-26 2.9E-30 224.4 26.0 260 128-425 39-309 (384)
90 1elu_A L-cysteine/L-cystine C- 99.9 5.1E-27 1.8E-31 233.0 15.3 251 139-425 27-316 (390)
91 1eg5_A Aminotransferase; PLP-d 99.9 1.2E-26 4E-31 229.8 16.9 255 131-424 5-278 (384)
92 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.8E-26 6.1E-31 227.7 18.1 250 139-425 20-288 (371)
93 1svv_A Threonine aldolase; str 99.9 2.4E-25 8.3E-30 218.3 25.4 267 126-422 11-284 (359)
94 1kmj_A Selenocysteine lyase; p 99.9 8.3E-26 2.8E-30 225.4 21.9 248 139-425 34-320 (406)
95 3kki_A CAI-1 autoinducer synth 99.9 2.8E-25 9.6E-30 222.8 25.7 259 128-425 59-327 (409)
96 2ch1_A 3-hydroxykynurenine tra 99.9 8.1E-26 2.8E-30 225.2 20.2 256 126-425 15-301 (396)
97 2huf_A Alanine glyoxylate amin 99.9 8.1E-26 2.8E-30 224.9 19.6 260 122-425 12-302 (393)
98 2bwn_A 5-aminolevulinate synth 99.9 4.7E-25 1.6E-29 220.4 24.4 262 130-425 48-321 (401)
99 3cai_A Possible aminotransfera 99.9 1.7E-25 5.7E-30 223.8 20.0 271 114-424 12-321 (406)
100 4adb_A Succinylornithine trans 99.9 1.2E-25 4.2E-30 224.8 18.9 246 140-427 56-324 (406)
101 2w8t_A SPT, serine palmitoyltr 99.9 6.4E-25 2.2E-29 221.8 23.2 261 129-425 65-335 (427)
102 2rfv_A Methionine gamma-lyase; 99.9 1.3E-24 4.3E-29 217.5 24.4 213 165-425 62-282 (398)
103 2ez2_A Beta-tyrosinase, tyrosi 99.9 6.3E-24 2.2E-28 216.0 29.3 249 67-380 12-282 (456)
104 1sff_A 4-aminobutyrate aminotr 99.9 1.9E-25 6.6E-30 224.9 17.8 270 129-426 42-339 (426)
105 3f9t_A TDC, L-tyrosine decarbo 99.9 6.2E-25 2.1E-29 218.0 20.7 261 139-425 41-328 (397)
106 2z9v_A Aspartate aminotransfer 99.9 4.1E-25 1.4E-29 219.8 18.9 248 137-425 17-289 (392)
107 3zrp_A Serine-pyruvate aminotr 99.9 2.9E-25 9.8E-30 219.8 17.0 253 132-425 5-285 (384)
108 2ord_A Acoat, acetylornithine 99.9 2.1E-25 7.2E-30 222.7 15.5 245 140-426 57-322 (397)
109 2eh6_A Acoat, acetylornithine 99.9 3.6E-25 1.2E-29 219.0 16.5 244 140-425 45-309 (375)
110 1ibj_A CBL, cystathionine beta 99.9 6.8E-25 2.3E-29 223.8 18.8 220 160-424 124-348 (464)
111 1iug_A Putative aspartate amin 99.9 7.1E-25 2.4E-29 214.5 17.9 247 133-425 5-271 (352)
112 2yrr_A Aminotransferase, class 99.9 4.6E-25 1.6E-29 215.6 16.5 252 131-425 2-274 (353)
113 3i4j_A Aminotransferase, class 99.9 3.9E-24 1.3E-28 216.0 21.4 271 129-426 30-337 (430)
114 1jg8_A L-ALLO-threonine aldola 99.9 2.9E-24 1E-28 210.2 19.6 256 131-425 6-272 (347)
115 2po3_A 4-dehydrase; external a 99.9 3.1E-23 1E-27 209.1 27.7 195 139-381 29-226 (424)
116 3ruy_A Ornithine aminotransfer 99.9 8.4E-25 2.9E-29 217.9 16.0 257 128-425 36-322 (392)
117 3kgw_A Alanine-glyoxylate amin 99.9 2E-24 6.7E-29 214.4 18.2 254 129-425 23-306 (393)
118 3nnk_A Ureidoglycine-glyoxylat 99.9 2.8E-24 9.4E-29 215.0 19.3 258 126-425 10-309 (411)
119 1b9h_A AHBA synthase, protein 99.9 1E-23 3.5E-28 209.7 23.2 237 141-425 16-273 (388)
120 3lvm_A Cysteine desulfurase; s 99.9 6.7E-25 2.3E-29 220.6 14.4 248 139-424 33-302 (423)
121 1m32_A 2-aminoethylphosphonate 99.9 2E-24 7E-29 212.1 16.8 253 132-425 7-285 (366)
122 3a9z_A Selenocysteine lyase; P 99.9 1.3E-24 4.5E-29 219.3 14.9 249 139-425 29-325 (432)
123 4eb5_A Probable cysteine desul 99.9 2.9E-24 9.9E-29 212.6 16.3 254 131-424 4-274 (382)
124 2oga_A Transaminase; PLP-depen 99.9 2.4E-23 8.1E-28 208.3 22.9 213 141-399 43-271 (399)
125 2aeu_A Hypothetical protein MJ 99.9 3.4E-23 1.2E-27 205.6 23.5 243 98-425 29-280 (374)
126 3isl_A Purine catabolism prote 99.9 1.2E-23 4.1E-28 210.7 20.3 256 128-425 10-309 (416)
127 1ax4_A Tryptophanase; tryptoph 99.9 5.7E-23 1.9E-27 209.5 25.0 299 64-424 10-341 (467)
128 2eo5_A 419AA long hypothetical 99.9 5.4E-24 1.8E-28 214.4 16.4 267 129-424 43-347 (419)
129 1v72_A Aldolase; PLP-dependent 99.9 8.3E-24 2.8E-28 207.3 16.6 262 128-424 7-282 (356)
130 3f0h_A Aminotransferase; RER07 99.9 2.4E-23 8.3E-28 205.8 20.0 254 130-424 20-296 (376)
131 3ffr_A Phosphoserine aminotran 99.9 2.1E-23 7.1E-28 204.7 19.0 254 130-425 5-285 (362)
132 2pb2_A Acetylornithine/succiny 99.9 2.1E-23 7.2E-28 210.3 19.3 245 140-426 74-341 (420)
133 1s0a_A Adenosylmethionine-8-am 99.9 3.4E-23 1.2E-27 209.0 20.8 257 140-425 60-350 (429)
134 4hvk_A Probable cysteine desul 99.9 2.3E-23 7.7E-28 205.6 18.6 249 139-424 11-274 (382)
135 2dkj_A Serine hydroxymethyltra 99.9 1E-23 3.6E-28 210.6 16.2 248 141-425 36-300 (407)
136 2bkw_A Alanine-glyoxylate amin 99.9 1.3E-23 4.4E-28 208.1 16.4 257 129-424 5-300 (385)
137 3dxv_A Alpha-amino-epsilon-cap 99.9 1.4E-23 4.8E-28 212.5 16.6 269 129-427 44-341 (439)
138 1vef_A Acetylornithine/acetyl- 99.9 1.2E-23 4E-28 209.8 15.6 258 129-425 46-324 (395)
139 3ndn_A O-succinylhomoserine su 99.9 2.6E-22 8.9E-27 201.9 25.4 210 172-425 82-298 (414)
140 3qhx_A Cystathionine gamma-syn 99.9 4.1E-22 1.4E-26 199.1 25.5 213 166-425 65-283 (392)
141 1mdo_A ARNB aminotransferase; 99.9 4.5E-22 1.5E-26 197.9 25.1 192 140-380 18-213 (393)
142 4ffc_A 4-aminobutyrate aminotr 99.9 3.4E-23 1.2E-27 210.8 17.1 277 127-427 63-366 (453)
143 3acz_A Methionine gamma-lyase; 99.9 6.8E-22 2.3E-26 197.2 26.1 212 166-425 58-276 (389)
144 3l44_A Glutamate-1-semialdehyd 99.9 4.7E-23 1.6E-27 208.3 17.8 268 127-427 54-345 (434)
145 1cs1_A CGS, protein (cystathio 99.9 4.8E-22 1.6E-26 197.9 24.5 212 166-424 51-268 (386)
146 3dr4_A Putative perosamine syn 99.9 3.1E-22 1.1E-26 199.3 23.1 206 97-380 22-231 (391)
147 1zod_A DGD, 2,2-dialkylglycine 99.9 8.1E-23 2.8E-27 206.4 18.9 269 129-426 44-345 (433)
148 3n0l_A Serine hydroxymethyltra 99.9 8.1E-23 2.8E-27 204.8 18.6 251 140-424 37-300 (417)
149 3nyt_A Aminotransferase WBPE; 99.9 1.7E-22 5.7E-27 199.7 20.6 244 132-425 6-266 (367)
150 3vax_A Putative uncharacterize 99.9 1.9E-23 6.6E-28 208.2 12.9 251 139-423 31-301 (400)
151 3cog_A Cystathionine gamma-lya 99.9 2.9E-22 1E-26 200.9 21.1 215 162-425 63-284 (403)
152 3mad_A Sphingosine-1-phosphate 99.9 7.3E-23 2.5E-27 211.7 17.1 259 141-424 109-395 (514)
153 3uwc_A Nucleotide-sugar aminot 99.9 6.8E-22 2.3E-26 195.3 23.3 192 141-380 19-213 (374)
154 3k28_A Glutamate-1-semialdehyd 99.9 2.4E-22 8.2E-27 202.9 20.4 267 127-427 52-342 (429)
155 3n5m_A Adenosylmethionine-8-am 99.9 2E-22 6.8E-27 204.9 19.6 269 127-425 48-361 (452)
156 3gju_A Putative aminotransfera 99.9 3.5E-22 1.2E-26 203.7 21.5 272 128-425 51-368 (460)
157 1qz9_A Kynureninase; kynurenin 99.9 2E-22 7E-27 202.0 19.1 251 130-425 31-324 (416)
158 1pff_A Methionine gamma-lyase; 99.9 2.6E-22 9E-27 195.2 19.2 207 171-425 2-217 (331)
159 1gc0_A Methionine gamma-lyase; 99.9 1.2E-21 4E-26 196.1 24.2 212 165-424 63-282 (398)
160 3lws_A Aromatic amino acid bet 99.9 7.9E-23 2.7E-27 200.9 15.2 227 160-425 40-275 (357)
161 3nx3_A Acoat, acetylornithine 99.9 1.8E-22 6.2E-27 201.3 17.8 257 129-426 37-320 (395)
162 4a6r_A Omega transaminase; tra 99.9 2.7E-22 9.3E-27 204.5 19.3 268 128-422 50-360 (459)
163 1w23_A Phosphoserine aminotran 99.9 6E-24 2.1E-28 208.9 6.7 253 131-425 5-281 (360)
164 3mc6_A Sphingosine-1-phosphate 99.9 1.9E-22 6.7E-27 207.4 17.6 260 140-424 76-363 (497)
165 1qgn_A Protein (cystathionine 99.9 6E-21 2E-25 193.4 27.7 210 168-425 115-331 (445)
166 1wyu_B Glycine dehydrogenase s 99.9 3.6E-22 1.2E-26 204.5 18.9 248 141-425 79-363 (474)
167 1o69_A Aminotransferase; struc 99.9 1.3E-21 4.4E-26 195.4 22.2 237 141-425 11-266 (394)
168 3oks_A 4-aminobutyrate transam 99.9 2.8E-22 9.5E-27 204.0 17.5 275 127-427 60-368 (451)
169 3fq8_A Glutamate-1-semialdehyd 99.9 4.2E-22 1.4E-26 200.9 18.6 259 129-427 53-342 (427)
170 1z7d_A Ornithine aminotransfer 99.9 6.2E-22 2.1E-26 200.4 19.6 258 128-425 65-352 (433)
171 2c81_A Glutamine-2-deoxy-scyll 99.9 5.9E-22 2E-26 199.3 19.1 201 139-380 13-217 (418)
172 1n8p_A Cystathionine gamma-lya 99.9 5.5E-22 1.9E-26 198.2 18.7 211 166-425 54-274 (393)
173 3pj0_A LMO0305 protein; struct 99.9 1.1E-22 3.9E-27 199.8 13.4 243 139-425 26-277 (359)
174 3frk_A QDTB; aminotransferase, 99.9 9.3E-22 3.2E-26 194.6 19.8 196 140-381 15-213 (373)
175 3a8u_X Omega-amino acid--pyruv 99.9 5.3E-22 1.8E-26 201.5 18.0 255 141-424 68-367 (449)
176 2fnu_A Aminotransferase; prote 99.9 2.9E-21 9.9E-26 190.6 22.8 236 139-425 10-267 (375)
177 3i16_A Aluminum resistance pro 99.9 7.9E-22 2.7E-26 198.5 18.6 222 162-426 69-319 (427)
178 3ht4_A Aluminum resistance pro 99.9 5E-22 1.7E-26 200.6 17.1 224 172-426 66-308 (431)
179 2cy8_A D-phgat, D-phenylglycin 99.9 1.4E-21 4.7E-26 198.8 19.9 244 140-426 74-345 (453)
180 2c0r_A PSAT, phosphoserine ami 99.9 1E-22 3.5E-27 200.6 10.5 249 132-425 7-282 (362)
181 1rv3_A Serine hydroxymethyltra 99.9 3.1E-22 1E-26 205.4 14.2 254 140-425 56-344 (483)
182 3dod_A Adenosylmethionine-8-am 99.9 1.2E-21 4.1E-26 199.0 18.5 267 128-424 44-357 (448)
183 3jzl_A Putative cystathionine 99.9 8.2E-22 2.8E-26 197.6 16.5 224 160-426 53-302 (409)
184 3i5t_A Aminotransferase; pyrid 99.9 3E-21 1E-25 197.7 20.8 271 127-424 53-368 (476)
185 3tfu_A Adenosylmethionine-8-am 99.9 1.6E-21 5.5E-26 198.7 18.5 269 129-425 76-379 (457)
186 2oat_A Ornithine aminotransfer 99.9 1.9E-21 6.3E-26 197.2 18.8 259 127-425 75-363 (439)
187 3e9k_A Kynureninase; kynurenin 99.9 8.8E-22 3E-26 200.9 16.3 265 128-425 66-375 (465)
188 3ju7_A Putative PLP-dependent 99.9 2.5E-20 8.5E-25 185.2 26.0 240 139-425 13-271 (377)
189 2cb1_A O-acetyl homoserine sul 99.9 3.2E-20 1.1E-24 186.5 27.0 219 160-424 47-299 (412)
190 3hvy_A Cystathionine beta-lyas 99.9 1.5E-21 5.1E-26 196.5 17.0 224 161-426 69-319 (427)
191 3h7f_A Serine hydroxymethyltra 99.9 2E-21 6.7E-26 197.4 17.8 249 140-425 57-321 (447)
192 2oqx_A Tryptophanase; lyase, p 99.9 4.7E-21 1.6E-25 195.3 20.5 296 66-425 10-344 (467)
193 3ecd_A Serine hydroxymethyltra 99.9 7.9E-21 2.7E-25 190.7 20.6 252 141-425 45-309 (425)
194 2epj_A Glutamate-1-semialdehyd 99.9 6.1E-21 2.1E-25 192.8 19.2 256 129-426 57-345 (434)
195 2fq6_A Cystathionine beta-lyas 99.9 9.9E-21 3.4E-25 190.3 20.4 209 169-425 84-300 (415)
196 2dgk_A GAD-beta, GADB, glutama 99.9 7.8E-21 2.7E-25 193.2 19.6 254 140-425 54-346 (452)
197 3hmu_A Aminotransferase, class 99.9 9.9E-21 3.4E-25 193.6 20.1 273 127-425 54-366 (472)
198 3gbx_A Serine hydroxymethyltra 99.9 2.3E-21 7.7E-26 194.3 14.6 252 140-425 42-308 (420)
199 3nmy_A Xometc, cystathionine g 99.9 3.7E-20 1.3E-24 185.4 22.8 210 169-425 69-285 (400)
200 2e7u_A Glutamate-1-semialdehyd 99.9 1.2E-20 4.3E-25 190.0 19.3 255 129-426 53-341 (424)
201 2vi8_A Serine hydroxymethyltra 99.9 1.4E-20 4.8E-25 187.8 18.6 252 141-425 36-299 (405)
202 4e77_A Glutamate-1-semialdehyd 99.9 1.6E-20 5.5E-25 189.5 18.8 267 127-427 52-343 (429)
203 3vp6_A Glutamate decarboxylase 99.8 1.8E-19 6.1E-24 186.1 25.7 209 146-376 114-338 (511)
204 2okj_A Glutamate decarboxylase 99.8 1.6E-19 5.4E-24 186.2 24.7 246 160-424 121-404 (504)
205 1js3_A DDC;, DOPA decarboxylas 99.8 1.1E-19 3.6E-24 186.6 22.5 262 141-425 87-395 (486)
206 3ri6_A O-acetylhomoserine sulf 99.8 9.8E-20 3.4E-24 183.8 20.6 214 167-425 82-319 (430)
207 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 9E-19 3.1E-23 177.2 27.7 192 140-377 41-242 (437)
208 2cjg_A L-lysine-epsilon aminot 99.8 3.8E-20 1.3E-24 188.1 15.7 266 129-426 55-372 (449)
209 2z67_A O-phosphoseryl-tRNA(SEC 99.8 1.9E-19 6.5E-24 183.3 19.2 234 169-426 131-370 (456)
210 3hbx_A GAD 1, glutamate decarb 99.8 3.2E-19 1.1E-23 183.8 19.8 256 139-425 67-361 (502)
211 2fyf_A PSAT, phosphoserine ami 99.8 1.4E-19 4.7E-24 180.7 15.6 250 128-425 39-317 (398)
212 2jis_A Cysteine sulfinic acid 99.8 4E-18 1.4E-22 176.2 26.9 196 160-375 137-349 (515)
213 2ctz_A O-acetyl-L-homoserine s 99.8 1E-18 3.6E-23 176.0 21.7 156 169-366 60-221 (421)
214 3b8x_A WBDK, pyridoxamine 5-ph 99.8 6.6E-18 2.2E-22 168.0 25.8 198 138-380 11-215 (390)
215 2qma_A Diaminobutyrate-pyruvat 99.8 2E-18 7E-23 177.5 22.2 224 127-374 100-345 (497)
216 2x3l_A ORN/Lys/Arg decarboxyla 99.8 7.1E-19 2.4E-23 178.6 14.5 167 163-365 53-224 (446)
217 3ke3_A Putative serine-pyruvat 99.8 2.7E-17 9.2E-22 163.2 22.9 226 169-425 33-294 (379)
218 4e1o_A HDC, histidine decarbox 99.8 3.8E-17 1.3E-21 167.4 22.2 212 140-373 91-328 (481)
219 2vyc_A Biodegradative arginine 99.8 3.7E-17 1.3E-21 175.6 22.3 238 169-427 207-466 (755)
220 2a7v_A Serine hydroxymethyltra 99.7 8.5E-18 2.9E-22 171.8 15.2 252 140-426 66-355 (490)
221 2yky_A Beta-transaminase; tran 99.6 1.1E-19 3.9E-24 184.6 0.0 260 126-426 98-376 (465)
222 1c4k_A Protein (ornithine deca 99.7 1.3E-17 4.4E-22 177.8 14.4 235 169-424 175-437 (730)
223 3k40_A Aromatic-L-amino-acid d 99.7 1.4E-16 4.9E-21 162.8 21.2 189 160-365 102-315 (475)
224 1wyu_A Glycine dehydrogenase ( 99.7 8.8E-17 3E-21 162.6 18.5 173 166-376 103-282 (438)
225 3n75_A LDC, lysine decarboxyla 99.7 1.3E-16 4.6E-21 168.8 16.3 232 169-427 197-444 (715)
226 1ohv_A 4-aminobutyrate aminotr 99.7 1.2E-16 4E-21 163.4 12.9 275 127-426 62-395 (472)
227 4ao9_A Beta-phenylalanine amin 99.4 2.1E-12 7.3E-17 130.3 18.4 262 126-428 85-364 (454)
228 3bc8_A O-phosphoseryl-tRNA(SEC 99.4 5.6E-12 1.9E-16 126.3 20.3 191 168-379 95-291 (450)
229 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 4.1E-12 1.4E-16 126.1 18.6 235 171-427 116-357 (501)
230 4atq_A 4-aminobutyrate transam 99.3 1E-10 3.5E-15 118.3 21.1 279 126-428 62-368 (456)
231 3m5u_A Phosphoserine aminotran 99.3 1.1E-11 3.7E-16 121.9 10.5 249 130-426 6-281 (361)
232 4e3q_A Pyruvate transaminase; 99.3 4E-10 1.4E-14 114.5 21.0 272 127-425 66-383 (473)
233 3qm2_A Phosphoserine aminotran 99.2 3.6E-12 1.2E-16 126.4 4.6 194 130-365 28-234 (386)
234 3e77_A Phosphoserine aminotran 99.2 1.2E-11 4E-16 122.2 7.2 245 137-425 21-292 (377)
235 4a0g_A Adenosylmethionine-8-am 99.0 5E-09 1.7E-13 113.4 17.0 246 129-399 381-716 (831)
236 3ou5_A Serine hydroxymethyltra 98.9 2.5E-08 8.6E-13 98.7 16.5 261 140-429 66-358 (490)
237 4fgs_A Probable dehydrogenase 91.3 1.4 4.7E-05 40.8 10.7 102 192-299 31-134 (273)
238 4g81_D Putative hexonate dehyd 88.9 5.7 0.00019 36.1 12.6 102 190-298 9-116 (255)
239 3rwb_A TPLDH, pyridoxal 4-dehy 88.0 3.9 0.00013 36.7 10.9 101 191-297 7-109 (247)
240 4dqx_A Probable oxidoreductase 86.8 5.9 0.0002 36.2 11.6 102 190-297 27-130 (277)
241 4e6p_A Probable sorbitol dehyd 85.8 7.5 0.00026 34.9 11.6 101 191-297 9-111 (259)
242 3gvc_A Oxidoreductase, probabl 85.2 5.4 0.00019 36.5 10.4 100 192-297 31-132 (277)
243 3l6e_A Oxidoreductase, short-c 84.9 5.7 0.00019 35.2 10.2 100 192-297 5-106 (235)
244 3grp_A 3-oxoacyl-(acyl carrier 84.8 6.4 0.00022 35.7 10.7 101 191-297 28-130 (266)
245 4eso_A Putative oxidoreductase 84.7 7.3 0.00025 35.0 11.0 101 191-298 9-112 (255)
246 3n74_A 3-ketoacyl-(acyl-carrie 84.7 7.6 0.00026 34.8 11.1 101 190-296 9-112 (261)
247 3lyl_A 3-oxoacyl-(acyl-carrier 84.6 13 0.00045 32.8 12.6 101 191-297 6-111 (247)
248 3h7a_A Short chain dehydrogena 84.6 13 0.00043 33.3 12.5 100 191-297 8-112 (252)
249 4ibo_A Gluconate dehydrogenase 83.9 11 0.00039 34.1 12.0 102 190-297 26-132 (271)
250 3gem_A Short chain dehydrogena 83.8 7.8 0.00027 35.0 10.8 100 190-297 27-127 (260)
251 3ppi_A 3-hydroxyacyl-COA dehyd 83.7 11 0.00037 34.3 11.8 99 192-297 32-138 (281)
252 3tpc_A Short chain alcohol deh 83.5 5.3 0.00018 35.8 9.5 101 191-297 8-114 (257)
253 3gaf_A 7-alpha-hydroxysteroid 82.9 10 0.00034 34.0 11.1 101 191-297 13-117 (256)
254 3op4_A 3-oxoacyl-[acyl-carrier 82.8 8.9 0.0003 34.2 10.6 101 191-297 10-112 (248)
255 3m1a_A Putative dehydrogenase; 82.7 7.2 0.00025 35.4 10.2 98 192-295 7-106 (281)
256 3pxx_A Carveol dehydrogenase; 82.6 6.5 0.00022 35.8 9.8 102 191-298 11-127 (287)
257 4fn4_A Short chain dehydrogena 82.4 11 0.00036 34.3 10.9 100 192-298 9-115 (254)
258 3zu3_A Putative reductase YPO4 82.3 24 0.00082 34.3 13.9 107 165-279 22-145 (405)
259 4iin_A 3-ketoacyl-acyl carrier 81.9 9.1 0.00031 34.6 10.5 105 187-297 26-136 (271)
260 3tfo_A Putative 3-oxoacyl-(acy 81.7 13 0.00045 33.6 11.4 99 193-297 7-110 (264)
261 3sc4_A Short chain dehydrogena 81.7 18 0.00062 32.9 12.6 101 191-297 10-122 (285)
262 3gh5_A HEX1, beta-hexosaminida 81.6 3.8 0.00013 41.4 8.2 114 186-309 126-275 (525)
263 2ew8_A (S)-1-phenylethanol deh 81.6 16 0.00056 32.4 12.0 99 192-296 9-110 (249)
264 2gjx_A Beta-hexosaminidase alp 81.2 5.4 0.00018 40.2 9.2 108 187-308 97-233 (507)
265 1hxh_A 3BETA/17BETA-hydroxyste 81.0 17 0.00057 32.4 11.8 100 192-297 8-109 (253)
266 2o23_A HADH2 protein; HSD17B10 80.8 15 0.00053 32.6 11.6 81 191-277 13-93 (265)
267 4dmm_A 3-oxoacyl-[acyl-carrier 80.8 9.7 0.00033 34.5 10.2 102 190-297 28-135 (269)
268 4dyv_A Short-chain dehydrogena 80.4 11 0.00037 34.3 10.4 99 192-297 29-132 (272)
269 3tzq_B Short-chain type dehydr 80.4 12 0.00041 33.9 10.7 100 191-297 12-116 (271)
270 4fc7_A Peroxisomal 2,4-dienoyl 80.3 17 0.00059 32.9 11.8 99 192-297 29-134 (277)
271 3rih_A Short chain dehydrogena 80.0 17 0.0006 33.3 11.8 101 191-297 42-148 (293)
272 3t7c_A Carveol dehydrogenase; 80.0 17 0.00057 33.4 11.7 101 191-297 29-147 (299)
273 4gkb_A 3-oxoacyl-[acyl-carrier 80.0 17 0.00059 32.8 11.5 100 192-298 8-112 (258)
274 3edm_A Short chain dehydrogena 79.6 25 0.00087 31.4 12.6 101 191-297 9-116 (259)
275 3ksu_A 3-oxoacyl-acyl carrier 79.3 26 0.00091 31.3 12.6 102 190-297 11-120 (262)
276 3rkr_A Short chain oxidoreduct 78.9 21 0.00071 31.9 11.8 100 192-297 31-136 (262)
277 3sju_A Keto reductase; short-c 78.7 16 0.00055 33.2 11.1 100 192-297 26-130 (279)
278 1vl8_A Gluconate 5-dehydrogena 78.7 20 0.00067 32.3 11.6 101 191-297 22-128 (267)
279 3ged_A Short-chain dehydrogena 78.6 13 0.00044 33.5 10.1 99 192-298 4-105 (247)
280 3e03_A Short chain dehydrogena 78.6 22 0.00074 32.1 11.9 102 190-297 6-119 (274)
281 3is3_A 17BETA-hydroxysteroid d 78.5 11 0.00036 34.2 9.7 101 191-298 19-126 (270)
282 1fmc_A 7 alpha-hydroxysteroid 78.3 26 0.00089 30.8 12.2 98 191-294 12-113 (255)
283 2c07_A 3-oxoacyl-(acyl-carrier 77.4 35 0.0012 30.8 13.0 98 192-295 46-148 (285)
284 3sx2_A Putative 3-ketoacyl-(ac 77.4 21 0.00072 32.2 11.4 99 191-297 14-127 (278)
285 3nyw_A Putative oxidoreductase 77.3 14 0.00048 33.0 10.0 100 192-297 9-115 (250)
286 2jah_A Clavulanic acid dehydro 77.3 23 0.00078 31.4 11.5 101 191-297 8-113 (247)
287 3tjr_A Short chain dehydrogena 77.2 20 0.00069 32.9 11.4 101 191-297 32-137 (301)
288 3uve_A Carveol dehydrogenase ( 77.2 12 0.00041 34.1 9.7 100 191-297 12-134 (286)
289 3kvo_A Hydroxysteroid dehydrog 77.1 31 0.0011 32.5 12.8 100 192-297 47-158 (346)
290 3v2h_A D-beta-hydroxybutyrate 77.0 29 0.00099 31.5 12.3 101 191-297 26-133 (281)
291 1geg_A Acetoin reductase; SDR 76.8 25 0.00087 31.2 11.7 99 193-297 5-108 (256)
292 3tsc_A Putative oxidoreductase 76.8 14 0.00049 33.4 10.1 101 191-297 12-130 (277)
293 1x1t_A D(-)-3-hydroxybutyrate 76.7 25 0.00087 31.3 11.7 99 192-297 6-112 (260)
294 3imf_A Short chain dehydrogena 76.6 24 0.00084 31.4 11.5 100 192-298 8-113 (257)
295 3s55_A Putative short-chain de 76.5 26 0.00088 31.7 11.8 101 191-297 11-128 (281)
296 1hdc_A 3-alpha, 20 beta-hydrox 76.4 18 0.0006 32.3 10.4 99 192-296 7-107 (254)
297 3qlj_A Short chain dehydrogena 76.4 18 0.00063 33.6 10.9 99 192-297 29-143 (322)
298 3ucx_A Short chain dehydrogena 76.3 24 0.00081 31.6 11.4 101 191-297 12-118 (264)
299 3oid_A Enoyl-[acyl-carrier-pro 76.2 25 0.00087 31.4 11.5 100 192-297 6-111 (258)
300 3v2g_A 3-oxoacyl-[acyl-carrier 76.2 30 0.001 31.2 12.1 104 188-298 29-139 (271)
301 3zv4_A CIS-2,3-dihydrobiphenyl 76.1 15 0.0005 33.5 10.0 82 191-279 6-87 (281)
302 3lf2_A Short chain oxidoreduct 75.8 28 0.00097 31.1 11.8 103 190-298 8-117 (265)
303 1jak_A Beta-N-acetylhexosamini 75.7 4.3 0.00015 41.0 6.6 112 187-308 103-249 (512)
304 3qiv_A Short-chain dehydrogena 75.7 26 0.00089 30.9 11.4 101 190-297 9-118 (253)
305 1now_A Beta-hexosaminidase bet 75.4 10 0.00035 38.2 9.2 108 186-308 102-238 (507)
306 3osu_A 3-oxoacyl-[acyl-carrier 75.4 16 0.00056 32.3 9.9 100 192-297 6-111 (246)
307 3ezl_A Acetoacetyl-COA reducta 75.4 28 0.00095 30.8 11.5 100 192-297 15-120 (256)
308 4egf_A L-xylulose reductase; s 75.2 23 0.00078 31.8 11.0 101 191-297 21-127 (266)
309 3ijr_A Oxidoreductase, short c 75.1 28 0.00096 31.7 11.7 100 191-297 48-155 (291)
310 2rhc_B Actinorhodin polyketide 75.0 33 0.0011 31.0 12.0 100 192-297 24-128 (277)
311 3oec_A Carveol dehydrogenase ( 74.7 29 0.00099 32.1 11.8 101 191-297 47-164 (317)
312 3ai3_A NADPH-sorbose reductase 74.7 30 0.001 30.8 11.6 99 191-296 8-113 (263)
313 3o38_A Short chain dehydrogena 74.6 22 0.00075 31.8 10.7 101 191-297 23-130 (266)
314 1uls_A Putative 3-oxoacyl-acyl 74.5 23 0.00079 31.3 10.6 98 192-297 7-106 (245)
315 3l77_A Short-chain alcohol deh 74.2 16 0.00054 32.0 9.4 100 192-297 4-109 (235)
316 1w6u_A 2,4-dienoyl-COA reducta 74.0 34 0.0012 31.0 12.1 100 191-296 27-132 (302)
317 2ae2_A Protein (tropinone redu 74.0 43 0.0015 29.7 12.5 100 191-297 10-116 (260)
318 3pgx_A Carveol dehydrogenase; 73.7 17 0.0006 32.8 9.8 101 191-297 16-134 (280)
319 3r1i_A Short-chain type dehydr 73.7 23 0.00078 32.1 10.6 103 189-297 31-138 (276)
320 1yb1_A 17-beta-hydroxysteroid 73.6 32 0.0011 30.8 11.6 82 190-277 31-115 (272)
321 3ftp_A 3-oxoacyl-[acyl-carrier 73.4 28 0.00096 31.4 11.1 99 192-297 30-134 (270)
322 3gdg_A Probable NADP-dependent 73.4 26 0.00087 31.3 10.8 102 190-297 20-130 (267)
323 2uvd_A 3-oxoacyl-(acyl-carrier 73.2 34 0.0012 30.1 11.5 100 192-297 6-111 (246)
324 1iy8_A Levodione reductase; ox 73.0 32 0.0011 30.7 11.4 99 191-296 14-121 (267)
325 3ak4_A NADH-dependent quinucli 72.7 27 0.00092 31.1 10.7 100 191-297 13-115 (263)
326 3v8b_A Putative dehydrogenase, 72.7 32 0.0011 31.3 11.3 100 191-297 29-135 (283)
327 2a4k_A 3-oxoacyl-[acyl carrier 72.6 20 0.00068 32.2 9.8 100 192-297 8-109 (263)
328 3pk0_A Short-chain dehydrogena 72.5 29 0.001 31.0 11.0 101 191-297 11-117 (262)
329 2pnf_A 3-oxoacyl-[acyl-carrier 72.3 48 0.0017 28.8 12.3 99 191-295 8-112 (248)
330 3cxt_A Dehydrogenase with diff 72.1 34 0.0011 31.3 11.4 99 191-296 35-139 (291)
331 1nff_A Putative oxidoreductase 72.1 30 0.001 30.9 10.9 99 191-295 8-108 (260)
332 3r3s_A Oxidoreductase; structu 71.8 32 0.0011 31.4 11.2 102 191-298 50-159 (294)
333 3awd_A GOX2181, putative polyo 71.8 40 0.0014 29.7 11.7 81 191-277 14-97 (260)
334 3a28_C L-2.3-butanediol dehydr 71.7 28 0.00096 30.9 10.6 97 193-296 5-109 (258)
335 1ae1_A Tropinone reductase-I; 71.7 50 0.0017 29.6 12.4 101 191-297 22-128 (273)
336 2cfc_A 2-(R)-hydroxypropyl-COM 71.6 25 0.00086 30.9 10.2 79 193-277 5-87 (250)
337 4imr_A 3-oxoacyl-(acyl-carrier 71.3 32 0.0011 31.1 11.0 101 190-297 33-138 (275)
338 3rjz_A N-type ATP pyrophosphat 70.7 29 0.001 31.0 10.1 101 192-308 7-121 (237)
339 3u5t_A 3-oxoacyl-[acyl-carrier 70.6 25 0.00085 31.7 10.0 99 192-297 29-134 (267)
340 3s8m_A Enoyl-ACP reductase; ro 70.5 75 0.0026 31.0 13.8 81 192-279 62-160 (422)
341 3tox_A Short chain dehydrogena 70.3 40 0.0014 30.5 11.4 99 192-297 10-115 (280)
342 1zk4_A R-specific alcohol dehy 70.3 43 0.0015 29.3 11.5 99 192-296 8-110 (251)
343 3u9l_A 3-oxoacyl-[acyl-carrier 70.2 37 0.0013 31.6 11.4 99 192-297 7-116 (324)
344 2wsb_A Galactitol dehydrogenas 69.9 40 0.0014 29.6 11.2 98 191-295 12-112 (254)
345 1zem_A Xylitol dehydrogenase; 69.6 43 0.0015 29.8 11.4 100 191-297 8-114 (262)
346 2z1n_A Dehydrogenase; reductas 69.6 60 0.002 28.7 12.5 98 191-295 8-112 (260)
347 1h5q_A NADP-dependent mannitol 69.6 51 0.0018 29.0 11.9 99 192-296 16-120 (265)
348 2q2v_A Beta-D-hydroxybutyrate 69.3 48 0.0016 29.3 11.6 99 192-296 6-107 (255)
349 1xkq_A Short-chain reductase f 68.9 42 0.0014 30.2 11.3 100 192-297 8-119 (280)
350 1xhl_A Short-chain dehydrogena 67.9 39 0.0013 30.9 10.9 100 191-296 27-136 (297)
351 2b4q_A Rhamnolipids biosynthes 66.9 58 0.002 29.3 11.7 100 191-297 30-134 (276)
352 4e3z_A Putative oxidoreductase 66.8 62 0.0021 28.9 11.9 99 193-297 29-134 (272)
353 2bd0_A Sepiapterin reductase; 66.6 51 0.0018 28.6 11.1 98 193-296 5-114 (244)
354 3kzv_A Uncharacterized oxidore 66.6 34 0.0012 30.3 10.0 100 193-297 4-108 (254)
355 1edo_A Beta-keto acyl carrier 66.5 64 0.0022 27.9 12.4 98 193-296 4-107 (244)
356 3gk3_A Acetoacetyl-COA reducta 66.5 51 0.0018 29.4 11.3 99 192-296 26-131 (269)
357 1oaa_A Sepiapterin reductase; 66.3 69 0.0024 28.2 13.1 101 192-298 8-125 (259)
358 3afn_B Carbonyl reductase; alp 66.1 59 0.002 28.4 11.5 100 192-297 9-115 (258)
359 4iiu_A 3-oxoacyl-[acyl-carrier 65.4 62 0.0021 28.7 11.6 100 192-297 28-133 (267)
360 3rd5_A Mypaa.01249.C; ssgcid, 65.4 17 0.00058 33.2 7.8 67 191-263 17-83 (291)
361 2x9g_A PTR1, pteridine reducta 65.2 40 0.0014 30.5 10.3 80 192-277 25-113 (288)
362 3svt_A Short-chain type dehydr 64.9 50 0.0017 29.7 10.9 99 191-296 12-120 (281)
363 1spx_A Short-chain reductase f 64.7 32 0.0011 30.9 9.5 80 192-277 8-93 (278)
364 3guy_A Short-chain dehydrogena 63.9 20 0.0007 31.2 7.8 96 192-297 3-101 (230)
365 3f1l_A Uncharacterized oxidore 63.6 77 0.0026 27.9 11.7 101 192-297 14-122 (252)
366 3asu_A Short-chain dehydrogena 63.5 32 0.0011 30.5 9.1 98 193-297 3-104 (248)
367 1xq1_A Putative tropinone redu 63.5 72 0.0025 28.1 11.6 99 191-295 15-119 (266)
368 3i1j_A Oxidoreductase, short c 63.4 66 0.0022 28.0 11.2 102 192-297 16-124 (247)
369 3ek2_A Enoyl-(acyl-carrier-pro 63.3 55 0.0019 29.0 10.8 102 189-297 13-126 (271)
370 2ph3_A 3-oxoacyl-[acyl carrier 63.2 73 0.0025 27.6 11.4 79 193-277 4-87 (245)
371 3ioy_A Short-chain dehydrogena 63.0 47 0.0016 30.7 10.5 99 192-296 10-115 (319)
372 3uf0_A Short-chain dehydrogena 62.4 87 0.003 28.0 12.8 99 190-297 31-135 (273)
373 1gee_A Glucose 1-dehydrogenase 62.3 70 0.0024 28.1 11.3 80 192-277 9-92 (261)
374 2bgk_A Rhizome secoisolaricire 62.0 75 0.0026 28.1 11.5 81 191-277 17-99 (278)
375 2zat_A Dehydrogenase/reductase 61.6 76 0.0026 27.9 11.4 100 191-296 15-120 (260)
376 1yxm_A Pecra, peroxisomal tran 61.3 72 0.0025 28.8 11.4 100 191-296 19-128 (303)
377 1ja9_A 4HNR, 1,3,6,8-tetrahydr 61.3 77 0.0026 27.9 11.4 101 191-297 22-128 (274)
378 1g0o_A Trihydroxynaphthalene r 61.3 91 0.0031 27.9 12.0 99 192-297 31-136 (283)
379 3qp9_A Type I polyketide synth 61.2 44 0.0015 33.6 10.5 102 189-297 249-371 (525)
380 4dry_A 3-oxoacyl-[acyl-carrier 61.2 65 0.0022 29.0 11.0 100 192-297 35-141 (281)
381 2ehd_A Oxidoreductase, oxidore 61.1 57 0.0019 28.2 10.2 79 192-277 7-85 (234)
382 2qq5_A DHRS1, dehydrogenase/re 60.9 62 0.0021 28.6 10.6 81 192-279 7-91 (260)
383 2d1y_A Hypothetical protein TT 60.9 82 0.0028 27.7 11.4 98 191-297 7-106 (256)
384 3rku_A Oxidoreductase YMR226C; 60.8 26 0.00088 32.0 8.1 99 192-297 35-145 (287)
385 3dii_A Short-chain dehydrogena 60.6 49 0.0017 29.1 9.8 98 193-297 5-104 (247)
386 1c7s_A Beta-N-acetylhexosamini 60.5 8.1 0.00028 41.4 5.0 118 186-308 264-418 (858)
387 1mxh_A Pteridine reductase 2; 59.7 58 0.002 29.0 10.3 80 192-277 13-101 (276)
388 4fhz_A Phospholipase/carboxyle 59.5 1E+02 0.0035 27.9 13.6 110 187-302 153-265 (285)
389 1wma_A Carbonyl reductase [NAD 59.3 75 0.0026 27.9 10.9 80 192-277 6-89 (276)
390 2hq1_A Glucose/ribitol dehydro 59.1 59 0.002 28.3 10.0 81 191-277 6-90 (247)
391 3tl3_A Short-chain type dehydr 58.6 21 0.00072 31.8 7.0 96 192-298 11-113 (257)
392 4f21_A Carboxylesterase/phosph 58.5 97 0.0033 27.3 12.0 132 165-302 106-243 (246)
393 1xg5_A ARPG836; short chain de 57.9 92 0.0032 27.7 11.4 80 192-277 34-118 (279)
394 3t4x_A Oxidoreductase, short c 56.6 92 0.0032 27.6 11.1 97 191-297 11-114 (267)
395 3i4f_A 3-oxoacyl-[acyl-carrier 56.1 72 0.0025 28.1 10.2 99 192-297 9-116 (264)
396 3f9i_A 3-oxoacyl-[acyl-carrier 55.7 39 0.0013 29.7 8.2 68 190-263 14-81 (249)
397 2pd6_A Estradiol 17-beta-dehyd 55.3 78 0.0027 27.8 10.3 99 191-296 8-120 (264)
398 2h7i_A Enoyl-[acyl-carrier-pro 52.8 72 0.0025 28.4 9.6 99 192-297 9-121 (269)
399 3nrc_A Enoyl-[acyl-carrier-pro 52.6 1.2E+02 0.004 27.2 11.1 101 191-297 27-137 (280)
400 2dtx_A Glucose 1-dehydrogenase 52.3 60 0.0021 28.9 9.0 92 192-297 10-103 (264)
401 1xu9_A Corticosteroid 11-beta- 51.7 1.3E+02 0.0045 26.8 11.5 80 192-277 30-113 (286)
402 1xky_A Dihydrodipicolinate syn 51.6 99 0.0034 28.4 10.5 89 192-310 83-174 (301)
403 3bk2_A RNAse J, metal dependen 51.4 27 0.00093 35.5 7.1 79 213-304 337-423 (562)
404 3icc_A Putative 3-oxoacyl-(acy 51.0 94 0.0032 27.1 10.1 100 192-297 9-120 (255)
405 2vc6_A MOSA, dihydrodipicolina 51.0 98 0.0034 28.3 10.3 78 192-296 71-151 (292)
406 3ctm_A Carbonyl reductase; alc 50.7 56 0.0019 29.2 8.5 81 191-277 35-118 (279)
407 1o5k_A DHDPS, dihydrodipicolin 50.5 1E+02 0.0034 28.5 10.3 34 192-226 83-119 (306)
408 3ozo_A N-acetylglucosaminidase 50.4 22 0.00075 36.2 6.1 102 192-308 142-274 (572)
409 1yde_A Retinal dehydrogenase/r 50.3 1.4E+02 0.0047 26.6 11.7 99 191-297 10-112 (270)
410 2yxg_A DHDPS, dihydrodipicolin 49.4 82 0.0028 28.8 9.5 78 192-296 71-151 (289)
411 4da9_A Short-chain dehydrogena 49.1 65 0.0022 29.0 8.7 98 192-295 31-136 (280)
412 4eue_A Putative reductase CA_C 49.0 1.9E+02 0.0066 27.9 16.3 81 190-276 59-157 (418)
413 1yo6_A Putative carbonyl reduc 49.0 1E+02 0.0036 26.5 10.0 80 192-277 5-88 (250)
414 3mje_A AMPHB; rossmann fold, o 48.5 1.1E+02 0.0037 30.5 10.8 99 192-297 240-349 (496)
415 2nwq_A Probable short-chain de 48.3 71 0.0024 28.7 8.8 98 192-296 23-126 (272)
416 2ehh_A DHDPS, dihydrodipicolin 48.2 1E+02 0.0036 28.1 10.0 78 192-296 71-151 (294)
417 3p19_A BFPVVD8, putative blue 48.1 54 0.0018 29.4 7.9 98 191-297 17-116 (266)
418 3oig_A Enoyl-[acyl-carrier-pro 47.4 82 0.0028 27.8 9.1 100 190-296 7-119 (266)
419 3zs7_A Pyridoxal kinase; trans 47.3 72 0.0025 29.3 8.8 56 252-314 56-122 (300)
420 2hmc_A AGR_L_411P, dihydrodipi 47.0 1E+02 0.0034 29.1 9.8 91 192-310 94-187 (344)
421 2rfg_A Dihydrodipicolinate syn 46.9 84 0.0029 28.9 9.1 89 192-310 71-162 (297)
422 3tsm_A IGPS, indole-3-glycerol 46.9 97 0.0033 28.2 9.3 50 249-310 127-176 (272)
423 4b79_A PA4098, probable short- 46.7 45 0.0015 29.8 7.0 93 192-298 13-106 (242)
424 4hp8_A 2-deoxy-D-gluconate 3-d 46.6 42 0.0014 30.1 6.8 96 191-298 10-109 (247)
425 1e7w_A Pteridine reductase; di 46.5 1E+02 0.0035 27.8 9.7 54 192-246 11-69 (291)
426 2ojp_A DHDPS, dihydrodipicolin 45.3 97 0.0033 28.3 9.3 78 192-296 72-152 (292)
427 2qhx_A Pteridine reductase 1; 44.8 1.1E+02 0.0037 28.3 9.7 55 192-247 48-107 (328)
428 2wkj_A N-acetylneuraminate lya 44.6 80 0.0027 29.1 8.6 89 192-310 82-174 (303)
429 2v9d_A YAGE; dihydrodipicolini 43.9 1.3E+02 0.0046 28.1 10.2 34 192-226 102-138 (343)
430 3b4u_A Dihydrodipicolinate syn 43.7 1.1E+02 0.0036 28.1 9.3 34 192-226 74-110 (294)
431 3i6i_A Putative leucoanthocyan 43.2 1.4E+02 0.0047 27.5 10.3 103 191-313 11-121 (346)
432 2nu8_A Succinyl-COA ligase [AD 43.2 39 0.0013 31.0 6.2 74 223-312 51-124 (288)
433 2r8w_A AGR_C_1641P; APC7498, d 43.0 74 0.0025 29.8 8.2 95 173-297 89-186 (332)
434 1bqc_A Protein (beta-mannanase 42.9 58 0.002 29.7 7.4 42 227-268 36-78 (302)
435 1qsg_A Enoyl-[acyl-carrier-pro 42.7 1.7E+02 0.006 25.6 11.2 98 192-297 11-121 (265)
436 3un1_A Probable oxidoreductase 42.6 1.2E+02 0.0042 26.7 9.5 95 191-297 29-125 (260)
437 2hfn_A Synechocystis photorece 42.5 65 0.0022 26.5 6.8 98 271-380 7-117 (153)
438 3h74_A Pyridoxal kinase; PSI-I 42.5 41 0.0014 30.6 6.2 52 256-314 60-112 (282)
439 3h5d_A DHDPS, dihydrodipicolin 42.1 1.9E+02 0.0063 26.7 10.7 95 173-297 62-160 (311)
440 1yht_A DSPB; beta barrel, hydr 41.6 16 0.00054 35.1 3.2 76 228-308 38-113 (367)
441 3l21_A DHDPS, dihydrodipicolin 41.5 1.4E+02 0.0049 27.4 9.8 49 251-302 32-80 (304)
442 4gqr_A Pancreatic alpha-amylas 41.3 17 0.0006 35.7 3.7 27 288-314 75-101 (496)
443 4h0c_A Phospholipase/carboxyle 41.3 1.2E+02 0.004 25.8 8.8 108 187-300 96-209 (210)
444 4h15_A Short chain alcohol deh 41.0 1.2E+02 0.004 27.2 9.0 95 190-298 11-110 (261)
445 2et6_A (3R)-hydroxyacyl-COA de 40.9 2.8E+02 0.0095 28.2 12.8 96 192-297 323-424 (604)
446 2epl_X N-acetyl-beta-D-glucosa 40.9 2.6E+02 0.0089 28.7 12.5 109 187-308 42-163 (627)
447 3qze_A DHDPS, dihydrodipicolin 40.8 1.5E+02 0.005 27.5 9.8 95 173-297 78-175 (314)
448 2p91_A Enoyl-[acyl-carrier-pro 40.7 1.9E+02 0.0065 25.7 10.6 99 192-297 23-132 (285)
449 2yl5_A Beta-N-acetylhexosamini 40.6 20 0.0007 35.2 4.0 70 228-308 30-113 (442)
450 3m5v_A DHDPS, dihydrodipicolin 40.5 1.8E+02 0.0062 26.6 10.4 89 192-310 79-171 (301)
451 1ydn_A Hydroxymethylglutaryl-C 40.5 2.1E+02 0.0071 26.0 10.8 45 251-301 151-195 (295)
452 2yv2_A Succinyl-COA synthetase 40.2 45 0.0016 30.7 6.1 75 223-313 57-132 (297)
453 2fwm_X 2,3-dihydro-2,3-dihydro 39.6 1.6E+02 0.0056 25.6 9.7 94 191-297 8-103 (250)
454 3vtz_A Glucose 1-dehydrogenase 39.5 1.3E+02 0.0043 26.8 9.0 94 191-297 15-110 (269)
455 1vhx_A Putative holliday junct 39.3 63 0.0022 26.5 6.2 60 250-314 40-102 (150)
456 3og9_A Protein YAHD A copper i 39.2 1.4E+02 0.0049 24.6 9.0 107 188-302 99-208 (209)
457 3si9_A DHDPS, dihydrodipicolin 39.0 1.8E+02 0.0063 26.8 10.2 95 173-297 77-174 (315)
458 3ndz_A Endoglucanase D; cellot 39.0 60 0.0021 30.4 6.9 19 227-245 46-64 (345)
459 4ggo_A Trans-2-enoyl-COA reduc 38.8 2.5E+02 0.0086 27.0 11.1 83 189-277 49-147 (401)
460 1hjs_A Beta-1,4-galactanase; 4 38.7 71 0.0024 29.9 7.3 38 279-316 49-86 (332)
461 2ekp_A 2-deoxy-D-gluconate 3-d 38.1 1.4E+02 0.0047 25.8 8.9 32 192-224 4-35 (239)
462 2yv1_A Succinyl-COA ligase [AD 37.7 35 0.0012 31.5 4.9 75 223-313 57-131 (294)
463 2yl6_A Beta-N-acetylhexosamini 37.5 20 0.0007 35.1 3.4 28 281-308 83-110 (434)
464 1f6k_A N-acetylneuraminate lya 37.3 1.2E+02 0.004 27.8 8.5 95 173-297 59-156 (293)
465 3cpr_A Dihydrodipicolinate syn 37.3 1.9E+02 0.0066 26.4 10.0 48 251-301 33-80 (304)
466 3o26_A Salutaridine reductase; 37.0 1.8E+02 0.0062 25.9 9.9 80 192-277 14-98 (311)
467 3icg_A Endoglucanase D; cellul 37.0 63 0.0022 32.3 7.1 20 226-245 48-67 (515)
468 3na8_A Putative dihydrodipicol 36.9 2.1E+02 0.0073 26.4 10.3 95 173-297 79-177 (315)
469 1y80_A Predicted cobalamin bin 36.9 1.5E+02 0.0051 25.3 8.7 60 228-303 108-167 (210)
470 3b3e_A YVGN protein; aldo-keto 36.8 2.5E+02 0.0086 25.7 12.4 145 142-312 65-226 (310)
471 3nco_A Endoglucanase fncel5A; 36.6 72 0.0025 29.3 7.0 42 227-268 45-95 (320)
472 2pd4_A Enoyl-[acyl-carrier-pro 36.5 2.2E+02 0.0076 25.1 11.9 99 191-297 7-117 (275)
473 3m0z_A Putative aldolase; MCSG 36.2 68 0.0023 28.3 6.0 77 228-318 150-227 (249)
474 1iv0_A Hypothetical protein; r 35.5 74 0.0025 23.9 5.6 58 251-313 37-96 (98)
475 3mbh_A Putative phosphomethylp 35.3 44 0.0015 30.6 5.2 51 257-314 64-117 (291)
476 3dhu_A Alpha-amylase; structur 35.3 58 0.002 31.7 6.4 27 288-314 82-108 (449)
477 2wyu_A Enoyl-[acyl carrier pro 35.1 2.2E+02 0.0074 24.9 9.8 99 191-297 9-119 (261)
478 2wkj_A N-acetylneuraminate lya 34.7 2E+02 0.0069 26.3 9.7 48 251-301 28-75 (303)
479 3k31_A Enoyl-(acyl-carrier-pro 34.6 2.5E+02 0.0087 25.1 10.5 99 191-297 31-141 (296)
480 2uv9_A Fatty acid synthase alp 34.3 3.2E+02 0.011 32.1 12.7 103 187-296 649-770 (1878)
481 3a5f_A Dihydrodipicolinate syn 34.2 96 0.0033 28.3 7.3 95 173-297 56-153 (291)
482 3pzs_A PM kinase, pyridoxamine 33.9 1.8E+02 0.0061 26.2 9.2 54 252-312 57-117 (289)
483 3fkr_A L-2-keto-3-deoxyarabona 33.9 2.8E+02 0.0096 25.4 12.2 33 192-225 79-114 (309)
484 2yxb_A Coenzyme B12-dependent 33.8 1.1E+02 0.0039 25.1 7.1 59 229-303 39-97 (161)
485 1fob_A Beta-1,4-galactanase; B 33.6 1.2E+02 0.004 28.3 8.0 38 279-316 49-86 (334)
486 3mwd_B ATP-citrate synthase; A 33.3 53 0.0018 30.9 5.4 78 222-314 64-142 (334)
487 3flu_A DHDPS, dihydrodipicolin 33.2 2.1E+02 0.0071 26.1 9.5 95 173-297 62-159 (297)
488 1u83_A Phosphosulfolactate syn 33.2 2.8E+02 0.0095 25.2 10.4 110 171-311 81-193 (276)
489 2ya0_A Putative alkaline amylo 33.2 25 0.00084 37.0 3.4 25 289-313 254-278 (714)
490 2fr1_A Erythromycin synthase, 33.0 1.8E+02 0.006 28.7 9.6 101 188-295 223-333 (486)
491 3eb2_A Putative dihydrodipicol 33.0 1.9E+02 0.0065 26.4 9.2 76 193-295 76-154 (300)
492 3qja_A IGPS, indole-3-glycerol 32.9 1.5E+02 0.0051 26.8 8.3 50 249-310 120-169 (272)
493 3lut_A Voltage-gated potassium 32.9 3.1E+02 0.011 25.6 12.9 152 142-308 67-242 (367)
494 3f7j_A YVGN protein; aldo-keto 32.8 2.7E+02 0.0092 24.9 12.6 146 141-312 30-192 (276)
495 1tks_A 3,4-dihydroxy-2-butanon 32.8 78 0.0027 27.4 5.9 39 267-308 156-194 (204)
496 2gdz_A NAD+-dependent 15-hydro 32.8 1E+02 0.0036 27.1 7.3 78 192-275 9-91 (267)
497 1mzr_A 2,5-diketo-D-gluconate 32.7 2.8E+02 0.0097 25.1 13.4 144 142-311 49-209 (296)
498 3u0b_A Oxidoreductase, short c 32.4 2.4E+02 0.0083 27.4 10.4 99 192-298 214-318 (454)
499 1g94_A Alpha-amylase; beta-alp 32.2 27 0.00092 34.2 3.3 27 288-314 63-89 (448)
500 3m6y_A 4-hydroxy-2-oxoglutarat 31.8 65 0.0022 28.8 5.2 76 228-317 173-249 (275)
No 1
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=4.6e-58 Score=474.24 Aligned_cols=382 Identities=79% Similarity=1.248 Sum_probs=337.7
Q ss_pred CCCCCcccccccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCC
Q 013892 50 PTSSPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPS 129 (434)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~ 129 (434)
..+.+.+++++||+++.++.|++||+++.+|++++++|++|++.+||+++|++|||+|+.++++|++|+|++++++++|.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~ 96 (500)
T 3tcm_A 17 DKMAATVAVDNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPD 96 (500)
T ss_dssp ----CCCCGGGSCHHHHHCCCGGGSHHHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGG
T ss_pred CCccccCCHHHhCHHHHhhhhHhcCHHHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 209 (434)
+++++.++..+|.++++++.+.+..........|++..|..++|+++++++.+++|+++++++|++|+|+++++..+++.
T Consensus 97 ~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 176 (500)
T 3tcm_A 97 LLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQL 176 (500)
T ss_dssp GGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHH
T ss_pred cccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHH
Confidence 99999887779999999998888875322478999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 210 LIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
++.++||+|+++.|+|+.|...++..|++++.|+++++++|++|+++|++++++...+|.++++|+++|||||||.+++.
T Consensus 177 l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~ 256 (500)
T 3tcm_A 177 LIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAE 256 (500)
T ss_dssp HCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCH
T ss_pred HcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCH
Confidence 96348999999999999999999999999999999998899999999999999877777789999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++++|+++|+++|+++|+||+|++++|++..++.++..+..+++...+++++|+++||||+|+|+||+|+||+++.+.+
T Consensus 257 ~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~ 336 (500)
T 3tcm_A 257 ENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS 336 (500)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC
T ss_pred HHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC
Confidence 99999999999999999999999999997655578888777776432345568999999999867899999999876668
Q ss_pred HHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013892 370 AEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAKANIG 431 (434)
Q Consensus 370 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 431 (434)
+++++.+.+..+..++++.++|.++..++++++..+..++.|.++++.+++.++++.+.+.+
T Consensus 337 ~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 398 (500)
T 3tcm_A 337 APVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEH 398 (500)
T ss_dssp TTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999888777899999999999999987655666666666666666666665554443
No 2
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-57 Score=466.15 Aligned_cols=367 Identities=46% Similarity=0.808 Sum_probs=299.9
Q ss_pred CCCcccccccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcc
Q 013892 52 SSPAITVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSIL 131 (434)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l 131 (434)
..+.+++++||++|.+++|++||+|+.+|+++++++++|.++ ||++||++|||+|+.++|+|.+|+|++++++.+|.++
T Consensus 19 ~~~~~~~~~~~~~~~~~~y~~rg~~~~~a~~~~~~~~~g~~~-~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~ 97 (498)
T 3ihj_A 19 YFQSMTLESMNPQVKAVEYAVRGPIVLKAGEIELELQRGIKK-PFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLL 97 (498)
T ss_dssp EEEEEEEEEETTEEEEEEEEECCHHHHHHHHHHHHHHTTCCC-SSSSCBCCC----------CCHHHHHHHHHHHCGGGG
T ss_pred ccccCCHHHHHHHHHHhhhhhcCHHHHHHHHHHHHHhccCCC-chhhhhhcCCcCcccccCCcchHHHHHHHHhcCcccc
Confidence 456799999999999999999999999999999999999875 9999999999999999999999999999999999999
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhc-CCCCCCCCEEEcCChHHHHHHHHHHH
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARD-GFPADPNDIFLTDGASPAVHMMMQLL 210 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~-g~~~~~~~i~~t~G~~~al~~~l~~l 210 (434)
+ +..+|.++++++.+.+.+........|+++.|.+++|+++++++.+++ |+++++++|++|+|+++++..+++++
T Consensus 98 ~----~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l 173 (498)
T 3ihj_A 98 D----SPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKIL 173 (498)
T ss_dssp G----CSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHH
T ss_pred C----cccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHH
Confidence 7 446899999999988887542236789999999999999999999988 48899999999999999999999999
Q ss_pred hcCCCC----EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccC
Q 013892 211 IRSEND----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQV 286 (434)
Q Consensus 211 ~~~~gd----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~ 286 (434)
+ ++|| .|+++.|+|+.|...++..|++++.|+++++++|++|+++|++++++...+ .++++|+++|||||||.+
T Consensus 174 ~-~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~k~i~l~np~NPTG~v 251 (498)
T 3ihj_A 174 V-SGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQV 251 (498)
T ss_dssp C-CCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT-SEEEEEEEESSCTTTCCC
T ss_pred c-CCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc-CCCeEEEEECCCCCCCCc
Confidence 8 6765 999999999999999999999999999998889999999999999875322 258999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC-CCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 287 LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE-KDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 287 ~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~-~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
++.+++++|+++|+++|++||+||+|++++|++..++.++..+..+++..+ +++++|+++||||.|+|+||+|+||+++
T Consensus 252 ~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~ 331 (498)
T 3ihj_A 252 QSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEV 331 (498)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEE
Confidence 999999999999999999999999999999986545778877765543211 2456899999999997789999999986
Q ss_pred ecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.++++++.+.+......+++.++|.++..++++++.++..++.+.++.+.+++.+.++
T Consensus 332 ~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~ 391 (498)
T 3ihj_A 332 INLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKK 391 (498)
T ss_dssp ESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHH
Confidence 555999999999888777899999999999999876544333433333333333333333
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=4.4e-42 Score=342.81 Aligned_cols=303 Identities=22% Similarity=0.333 Sum_probs=257.0
Q ss_pred ccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCC
Q 013892 60 SLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (434)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~ 139 (434)
.+++++...+.+....+..++.++.++ + +++|+++.|+|+. .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~i~l~~~~~~~-----------------------------~ 44 (385)
T 1b5p_A 3 GLSRRVQAMKPSATVAVNAKALELRRQ---G------VDLVALTAGEPDF-----------------------------D 44 (385)
T ss_dssp CCCHHHHHCCCCHHHHHHHHHHHHHHT---T------CCCEECCCSSCSS-----------------------------C
T ss_pred hhhhHHhhcCcchHHHHHHHHHHHHhc---C------CCEEEecCCCCCC-----------------------------C
Confidence 356777777777666677777666543 1 4689999999975 3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
.|+.+.+++.+.+... ...|++..|..++|+++++++.+.+|.++++++|++|+|+++++.++++.++ ++||+|+
T Consensus 45 ~~~~v~~a~~~~~~~~----~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl 119 (385)
T 1b5p_A 45 TPEHVKEAARRALAQG----KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAIL-DPGDEVI 119 (385)
T ss_dssp CCHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEE
T ss_pred CCHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhc-CCCCEEE
Confidence 4777888888887652 4579998999999999999999989988899999999999999999999998 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++++|+++|||||||.+++.+++++|+++|
T Consensus 120 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~ 193 (385)
T 1b5p_A 120 VLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLA 193 (385)
T ss_dssp EEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred EcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC------CCEEEEEeCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999998656789999999998865 789999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
+++|++||+||+|.++.+++. +.++..+ . ++ ++|+++||||.| |++|+|+||+++ ++++++.+.+.
T Consensus 194 ~~~~~~li~De~~~~~~~~~~--~~~~~~~----~---~~-~~i~~~s~SK~~-~~~G~RiG~~~~---~~~~~~~l~~~ 259 (385)
T 1b5p_A 194 VEHDFYLVSDEIYEHLLYEGE--HFSPGRV----A---PE-HTLTVNGAAKAF-AMTGWRIGYACG---PKEVIKAMASV 259 (385)
T ss_dssp HHTTCEEEEECTTTTCBSSSC--CCCGGGT----C---TT-TEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHH
T ss_pred HHcCCEEEEEccchhcccCCC--CCCHHHc----C---CC-CEEEEEechhhc-CCcccceEEEEe---CHHHHHHHHHH
Confidence 999999999999999888652 4444332 1 12 479999999999 899999999987 89999999887
Q ss_pred hh-cccCCchHHHHHHHHHcCC----CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 AS-VNLCSNISGQILASLVMSP----PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ~~-~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...+++.+.|.++..+++. .+++++.++.++++|+.+.+.|+++
T Consensus 260 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 260 SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 65 4568899999998888854 3456678889999999999999875
No 4
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=7.8e-42 Score=343.31 Aligned_cols=287 Identities=13% Similarity=0.099 Sum_probs=225.8
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+|++|.|...+.++ .+++.+.+++. .+.+.. ...+|++..|.++||+++
T Consensus 29 ~~~I~l~~G~~~d~~~~~------------------------~~~~~v~~a~~-~~~~~~--~~~~Y~~~~G~~~lr~ai 81 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDL------------------------HIFDSVLNADK-LVTENY--KEKPYLLGNGTEDFSTLT 81 (405)
T ss_dssp SSCEECSCSSCBCTTSSB------------------------CCCHHHHHHHH-HHHHHC--CCCCCCTTSSCHHHHHHH
T ss_pred cCcEEeeeeeeECCCCCC------------------------cccHHHHHHHH-HhcCCC--CCCCCCCCCCcHHHHHHH
Confidence 589999999864311111 23566666655 431222 367899999999999999
Q ss_pred HHHHHhhcCCCCCCCC--EEEcCChHHHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCC
Q 013892 177 AAGIEARDGFPADPND--IFLTDGASPAVHMMMQLLIRS--ENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGL 252 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~--i~~t~G~~~al~~~l~~l~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (434)
++|+.++++..+++++ +++|.|+++++.+++.+++ . + |+|++++|+|+.|...++..|++++.+++.++++|++
T Consensus 82 a~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~-~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 82 QNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLK-MLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHH-TTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHH-hcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 9999887776677775 5999999999999999987 6 8 9999999999999999999999999999855557899
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC-CccchHHHH
Q 013892 253 ETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVS 330 (434)
Q Consensus 253 d~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~-~~~s~~~~~ 330 (434)
|++.|++++++. .+++++++++| |||||.+++.+++++|+++|++||++||+||+|.++.|++.. +..++..+.
T Consensus 160 d~~~l~~~l~~~----~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~ 235 (405)
T 3k7y_A 160 NYDLFLNDLRNI----PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFE 235 (405)
T ss_dssp CHHHHHHHHHHS----CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHH
T ss_pred CHHHHHHHHHhC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHH
Confidence 999999999752 14578888755 999999999999999999999999999999999999886421 122232222
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH----HHhh-cccCCchHHHHHHHHHcCCC----
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY----KVAS-VNLCSNISGQILASLVMSPP---- 401 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~----~~~~-~~~~~~~~~q~~~~~~l~~~---- 401 (434)
. ..+ ++|+++||||+| ||+|+|+||++++..++++++.+. +... .+.+++.++|.++..+++++
T Consensus 236 ~----~~~--~~i~~~S~SK~~-~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~ 308 (405)
T 3k7y_A 236 E----KNI--AFSVCQSFSKNM-SLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKL 308 (405)
T ss_dssp T----TTC--CEEEEEECTTTS-CCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHH
T ss_pred h----cCC--cEEEEeeCCccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHH
Confidence 1 112 589999999999 899999999976555787766553 3333 56688899999999888774
Q ss_pred ---CCChHHHHHHHHHHHHHHHHHH
Q 013892 402 ---KVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 402 ---~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+++.++++.|+++|+.+.+.|+
T Consensus 309 ~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 309 NWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2245567778999999999888
No 5
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1e-39 Score=326.08 Aligned_cols=280 Identities=20% Similarity=0.276 Sum_probs=239.8
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|.. ..|+.+.+++.+.+.. ...|++..|..++|+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~-----~~~y~~~~g~~~lr~~l 75 (396)
T 3jtx_A 30 MEAVPLHIGEPKH-----------------------------PTPKVITDALTASLHE-----LEKYPLTAGLPELRQAC 75 (396)
T ss_dssp CCCEECSCCSCCS-----------------------------CCCHHHHHHHHHTGGG-----GGSCCCTTCCHHHHHHH
T ss_pred CCeEEeCCcCCCC-----------------------------CCCHHHHHHHHHHhhh-----ccCCCCCCCcHHHHHHH
Confidence 6899999999876 4578888888877653 67899999999999999
Q ss_pred HHHHHhhcCCC-CCCC-CEEEcCChHHHHHHHHHHHhcCCC-----CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 177 AAGIEARDGFP-ADPN-DIFLTDGASPAVHMMMQLLIRSEN-----DGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 177 a~~~~~~~g~~-~~~~-~i~~t~G~~~al~~~l~~l~~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
++++.+++|.+ ++++ +|++|+|+++++..+++.++ ++| |+|+++.|+|..+...++..|++++.+++ ++++
T Consensus 76 a~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~-~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g 153 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVL-NPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPS 153 (396)
T ss_dssp HHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHC-CC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTT
T ss_pred HHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHh-CCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCC
Confidence 99999999987 8888 99999999999999999998 686 79999999999999999999999999999 4457
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
|.+|+++|++++++ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.+....
T Consensus 154 ~~~d~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~ 226 (396)
T 3jtx_A 154 FNPDWRSISEEVWK------RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK-PLGCLQA 226 (396)
T ss_dssp CCCCGGGSCHHHHH------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCC-CCCHHHH
T ss_pred CccCHHHHHHhhcc------CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-CchHHhh
Confidence 88999999999987 7999999999999999999999999999999999999999999999887632 3444333
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHH
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESY 408 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~ 408 (434)
...+....+ +++++.||||.| |++|+|+||+++ ++++++.+..... ...+++.++|.++..++++.+++++.+
T Consensus 227 ~~~~~~~~~--~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 300 (396)
T 3jtx_A 227 AAQLGRSRQ--KLLMFTSLSKRS-NVPGLRSGFVAG---DAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNR 300 (396)
T ss_dssp HHHTTCCCT--TEEEEEESTTTS-SCGGGCCEEEEE---CHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHH
T ss_pred hhhcccccC--cEEEEecccccc-CCcccceEEEEe---CHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHH
Confidence 333332122 479999999998 889999999987 9999999988765 456889999999998888766677888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013892 409 ESYCAERDGILSSLARR 425 (434)
Q Consensus 409 ~~~~~~r~~l~~~L~~~ 425 (434)
+.++++++.+.+.|++.
T Consensus 301 ~~~~~~~~~l~~~l~~~ 317 (396)
T 3jtx_A 301 RLYQEKFERVIPILQQV 317 (396)
T ss_dssp HHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 88888888888887653
No 6
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.9e-39 Score=325.20 Aligned_cols=316 Identities=19% Similarity=0.159 Sum_probs=232.9
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
.++..+++.+....|...+++++++ + +++|||++|.+.+...+|+ ..
T Consensus 18 ~~~~~~v~~~p~d~i~~l~~~~~~d--------~-~~kinLgvG~y~d~~g~~~------------------------vl 64 (420)
T 4h51_A 18 AERWQKIQAQAPDVIFDLAKRAAAA--------K-GPKANLVIGAYRDEQGRPY------------------------PL 64 (420)
T ss_dssp HHHHHTCCCCCCCHHHHHHHHHHHC--------C-SSCEECCSCCCBCTTSCBC------------------------CC
T ss_pred hHHHhCCCCCCCChHHHHHHHHhcC--------C-CCCEEeecCcccCCCCCCC------------------------CC
Confidence 3556677777777888888888775 2 2489999998776444454 24
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCC--EEEcCChHHHHHHHHHHHhc---CCCC
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND--IFLTDGASPAVHMMMQLLIR---SEND 216 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~~~al~~~l~~l~~---~~gd 216 (434)
+.|.++..+.++.. ..+.|.|..|+++||+++++++.+. ....+. .+.|.|++.|+...+..+.+ +|||
T Consensus 65 ~~Vk~A~~~~~~~~---~~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd 138 (420)
T 4h51_A 65 RVVRKAEQLLLDMN---LDYEYLPISGYQPFIDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETT 138 (420)
T ss_dssp HHHHHHHHHHHHTT---CCCCCCCTTCCHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTS
T ss_pred HHHHHHHHHHhcCC---CCCCCCCcCChHHHHHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCC
Confidence 55665555555442 2567999999999999999998543 333333 45688999888777766542 6999
Q ss_pred EEEEcCCCChhHHHHHHHcCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 217 GILCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
+|++++|+|++|..+++..|++ +..++..+++++.+|++.+.+.++.. ..+++++++++||||||.+++.++|++|
T Consensus 139 ~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~vll~~~p~NPtG~~~~~~~~~~i 215 (420)
T 4h51_A 139 PIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAA---PDGSVFILHQCAHNPTGVDPSQEQWNEI 215 (420)
T ss_dssp CEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHS---CSSCEEEEESSSCTTTCCCCCHHHHHHH
T ss_pred EEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhcc---CCCcEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999997 55666666667899999999988763 2256677777999999999999999999
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
+++|+++++++|+||+|++|.|++.. ...+ .. ..+.+ .+.++|+++||||+| +++|+|+||+++.....+....
T Consensus 216 ~~~~~~~~~~~~~D~~Y~~~~~~~~~-~~~~-~~-~~~~~--~~~~~i~~~s~SK~~-~~~G~RvG~~~~~~~~~~~~~~ 289 (420)
T 4h51_A 216 ASLMLAKHHQVFFDSAYQGYASGSLD-TDAY-AA-RLFAR--RGIEVLLAQSFSKNM-GLYSERAGTLSLLLKDKTKRAD 289 (420)
T ss_dssp HHHHHHHTCEEEEEESCTTTTTSCHH-HHTH-HH-HHHHH--TTCCCEEEEECTTTS-CCGGGCEEEEEEECSCHHHHHH
T ss_pred HHHHHhcCceEeeehhhhhhccCCcc-cchH-HH-HhHHh--hCceEEEEecccccc-ccccCceEEEEecccCHHHHHH
Confidence 99999999999999999999887632 1111 11 11111 122579999999999 8999999999886655554433
Q ss_pred H----HHHhh-cccCCchHHHHHHHHHcCCCC-------CChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 I----YKVAS-VNLCSNISGQILASLVMSPPK-------VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l----~~~~~-~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+ ....+ .+++++..+|.++..+++++. +++.++++|+++|+.+.+.|++.
T Consensus 290 ~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 290 VKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 33333 788999999999999998851 24455666666666666666653
No 7
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=9.7e-40 Score=329.67 Aligned_cols=288 Identities=16% Similarity=0.142 Sum_probs=231.9
Q ss_pred ccceeccCC---CCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHH
Q 013892 97 DEILYCNIG---NPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLR 173 (434)
Q Consensus 97 ~~vi~~~iG---~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr 173 (434)
+++|++++| +|+. ....++.+.+++.+.+.+. ....|++..|.+++|
T Consensus 49 ~~~i~l~~G~y~d~~~---------------------------~~~~~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr 98 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDG---------------------------KIPLLRAVRDAEKARVEAG---LPRGYLPIDGIAAYD 98 (420)
T ss_dssp SSCEECCCCSCCCTTS---------------------------CCCCCHHHHHHHHHHHHTC---CCCCCCCTTCCHHHH
T ss_pred CCcEEeeeeeeECCCC---------------------------CccCcHHHHHHHHHHhccC---CCCCCCCCCCcHHHH
Confidence 479999999 5554 1123588999998888763 267899999999999
Q ss_pred HHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 174 DTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQ--LLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 174 ~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~l~--~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
+++++++.+.++..++++ +|++|+|+++++..+++ .++ ++||+|+++.|+|.+|...++..|++++.+++.++++
T Consensus 99 ~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~-~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~ 177 (420)
T 4f4e_A 99 ASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTL-NPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKT 177 (420)
T ss_dssp HHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH-CTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTT
T ss_pred HHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHh-CCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeecccc
Confidence 999999977655445788 89999999999999954 556 7999999999999999999999999999999854456
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
|++|++.|++.+++. ..+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++++....++...
T Consensus 178 ~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 254 (420)
T 4f4e_A 178 NGVNFDGMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLF 254 (420)
T ss_dssp TEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHH
T ss_pred CccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHH
Confidence 899999999999731 12678999999999999999999999999999999999999999999988753223444433
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH----HHHh-hcccCCchHHHHHHHHHcCCC---
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI----YKVA-SVNLCSNISGQILASLVMSPP--- 401 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~q~~~~~~l~~~--- 401 (434)
.. . .+ ++|+++||||.| |++|+|+||+++...++++++.+ .... ..+.+++.++|.++..++++.
T Consensus 255 ~~-~---~~--~~i~~~S~SK~~-~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 327 (420)
T 4f4e_A 255 AA-A---NL--NVFVSSSFSKSF-SLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELR 327 (420)
T ss_dssp HH-T---TC--CEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHH
T ss_pred Hh-c---CC--CEEEEEeCCccC-cCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHH
Confidence 22 1 12 479999999999 89999999997544467766543 2222 256678999999998888763
Q ss_pred ----CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 ----KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ----~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++++.+++++++|+.+.+.|++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 328 ASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 335677888899999999888875
No 8
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=6.6e-39 Score=320.06 Aligned_cols=295 Identities=20% Similarity=0.288 Sum_probs=244.3
Q ss_pred hhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHH
Q 013892 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (434)
Q Consensus 64 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~ 143 (434)
++..+.......+...+.++.++ | +++|+++.|++.. ..|+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~g~~~~-----------------------------~~~~~ 48 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARRAEEA---G------RRIIHMEVGQPGT-----------------------------GAPRG 48 (391)
T ss_dssp STTCCCCCTTHHHHHHHHHHHHT---T------CCCEECCCSSCSS-----------------------------CSCHH
T ss_pred hHhhcCcchHHHHHHHHHHHHhc---C------CCeEEccCCCCCC-----------------------------CCCHH
Confidence 34455555556677777777654 1 5799999999886 45788
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC
Q 013892 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP 223 (434)
Q Consensus 144 v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p 223 (434)
+++++.+.+.+. ...|++..|..++|+++++++.+++|+++++++|++|+|+++++..+++.++ ++||+|+++.|
T Consensus 49 v~~a~~~~~~~~----~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~vl~~~p 123 (391)
T 3h14_A 49 AVEALAKSLETD----ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALF-DSGDRVGIGAP 123 (391)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEEES
T ss_pred HHHHHHHHHhcC----CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhc-CCCCEEEEcCC
Confidence 999988887652 5679999999999999999999999999999999999999999999999998 79999999999
Q ss_pred CChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 224 QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 224 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
+|..+...++..|++++.++++++++|.+|+++|+++ ++++|++++|+||||.+++.+++++|+++|+++|
T Consensus 124 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 194 (391)
T 3h14_A 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQG 194 (391)
T ss_dssp CCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred CCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999998777889999998765 4789999999999999999999999999999999
Q ss_pred CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-c
Q 013892 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-V 382 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~ 382 (434)
+++|+||+|.++.+++. ..+.... . + ++|+++|+||.| |++|+|+||+++ ++++++.+..... .
T Consensus 195 ~~li~De~~~~~~~~~~--~~~~~~~----~---~--~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~ 259 (391)
T 3h14_A 195 ASFISDEIYHGIEYEAK--AVTALEL----T---D--ECYVINSFSKYF-SMTGWRVGWMVV---PEDQVRVVERIAQNM 259 (391)
T ss_dssp CEEEEECTTTTCBSSSC--CCCGGGT----C---S--SSEEEEESSSTT-CCTTSCCEEEEC---CGGGHHHHHHHHHHT
T ss_pred CEEEEECcchhcccCCC--CcChhhc----C---C--CEEEEEechhcc-CCccceeEEEEe---CHHHHHHHHHHHhhh
Confidence 99999999999888764 2333221 1 2 369999999999 889999999987 8889999887766 5
Q ss_pred ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..+++.++|.++..+++..+++++.++.++++++.+.+.|+++
T Consensus 260 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 302 (391)
T 3h14_A 260 FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA 302 (391)
T ss_dssp TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6688999999988888755557788889999999999988876
No 9
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=2e-38 Score=316.06 Aligned_cols=306 Identities=21% Similarity=0.299 Sum_probs=254.4
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
+++++...+......+..++.++.++ | +++|+++.|+|.. ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~~~~~~-----------------------------~~ 44 (388)
T 1j32_A 3 LAARVESVSPSMTLIIDAKAKAMKAE---G------IDVCSFSAGEPDF-----------------------------NT 44 (388)
T ss_dssp CCHHHHTSCCCSSTTTHHHHHHHHTT---T------CCCEECCCSSCSS-----------------------------CC
T ss_pred hhhHhHhCCccHHHHHHHHHHHHHhc---C------CCEEECCCCCCCC-----------------------------CC
Confidence 46677777777766777777776543 2 4789999999865 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
|+.+.+++.+.+... ...|++..|..++|+++++++.+.+|.++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 45 ~~~v~~a~~~~~~~~----~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~ 119 (388)
T 1j32_A 45 PKHIVEAAKAALEQG----KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMI-EPGDEVII 119 (388)
T ss_dssp CHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc-CCCCEEEE
Confidence 777888888887652 4579998999999999999999988988889999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+.|+|+.+...++..|++++.++++++++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~ 193 (388)
T 1j32_A 120 PAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP------KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAV 193 (388)
T ss_dssp ESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999987655788999999999875 7999999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|+++|+||+|.++.+++.. +.++..+..+.. + .++++.|+||.| |++|+|+||+++ ++++++.+....
T Consensus 194 ~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~---~--~~~~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~ 263 (388)
T 1j32_A 194 EAGLWVLSDEIYEKILYDDAQ-HLSIGAASPEAY---E--RSVVCSGFAKTY-AMTGWRVGFLAG---PVPLVKAATKIQ 263 (388)
T ss_dssp HHTCEEEEECTTTTCBCTTCC-CCCGGGSCHHHH---H--TEEEEEESTTTT-TCTTTCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccchhcccCCCC-CCCHHHcccccc---C--CEEEEeechhcc-CCcccceEEEEe---CHHHHHHHHHHH
Confidence 999999999999998886542 334433211100 1 368999999999 889999999987 889999988776
Q ss_pred h-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+++.+.|.++..+++. .+++++.+++++++++.+.+.|++.
T Consensus 264 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (388)
T 1j32_A 264 GHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM 310 (388)
T ss_dssp HTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5 4567888999988778864 3346677888889999998888764
No 10
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.3e-38 Score=318.94 Aligned_cols=306 Identities=15% Similarity=0.157 Sum_probs=237.5
Q ss_pred chhHHHHHHHHHHHhcCCCCCCcccceeccCCCC-cccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHH
Q 013892 74 GEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP-QSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQIL 152 (434)
Q Consensus 74 ~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p-~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l 152 (434)
..+...+.+++++ +.+++|++++|.| +..+.. ...+.+.+++.+.+
T Consensus 13 ~~i~~~~~~~~~~--------~~~~~i~l~~g~~~d~~~~~-------------------------~~~~~v~~a~~~~~ 59 (401)
T 7aat_A 13 DPILGVTEAFKRD--------TNSKKMNLGVGAYRDDNGKP-------------------------YVLNCVRKAEAMIA 59 (401)
T ss_dssp CHHHHHHHHHHHC--------CCTTCEECCCCSCCCTTSCC-------------------------CCCHHHHHHHHHHH
T ss_pred ChhHHHHHHHhhC--------CCCCceeeeeeeEECCCCCE-------------------------echHHHHHHHHHhc
Confidence 3455666666554 2246999999999 542211 12456777766666
Q ss_pred HcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHh--cCCCCEEEEcCCCChhH
Q 013892 153 DQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLI--RSENDGILCPIPQYPLY 228 (434)
Q Consensus 153 ~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~--~~~gd~Vlv~~p~y~~~ 228 (434)
... ...+|++..|.+++|+++++++.+++|..+++++|++ |+|+++++.+++..+. .++||+|+++.|+|..|
T Consensus 60 ~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~ 136 (401)
T 7aat_A 60 AKK---MDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNH 136 (401)
T ss_dssp HTT---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTH
T ss_pred ccc---cccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhH
Confidence 532 3678999999999999999999988887788999987 9999999998876653 16899999999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
...++..|++++.+++++++++++|++.+++.+++. ..+++++++++||||||.+++.+++++|+++|+++|+++|+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 137 TPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp HHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 999999999999999876567899999998888641 22688999999999999999999999999999999999999
Q ss_pred ccCCCCCccCCCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH----HHHHHHHHhh-c
Q 013892 309 DEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VREQIYKVAS-V 382 (434)
Q Consensus 309 Deay~~~~~~~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~~~~~-~ 382 (434)
||+|+++.+++.. +..++..... ..+ ++|+++||||.| |++|+|+||+++...+++ +++.+..... .
T Consensus 214 Deay~~~~~~~~~~~~~~~~~~~~----~~~--~~i~~~S~sK~~-~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~ 286 (401)
T 7aat_A 214 DMAYQGFASGDINRDAWALRHFIE----QGI--DVVLSQSYAKNM-GLYGERAGAFTVICRDAEEAKRVESQLKILIRPM 286 (401)
T ss_dssp EESCTTTTTSCHHHHTHHHHHHHH----TTC--CCEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCccccHHHHHHHHh----cCC--cEEEEecCCccc-ccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 9999998886521 1222222211 112 479999999999 899999999986544666 4555555544 5
Q ss_pred ccCCchHHHHHHHHHcCCC-------CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPP-------KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+++..+|.++..+++++ +++++.+++++++|+.+.+.|++.
T Consensus 287 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 287 YSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6678888998888777653 235567788888888888888765
No 11
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=3.3e-38 Score=315.54 Aligned_cols=303 Identities=20% Similarity=0.306 Sum_probs=247.9
Q ss_pred cChhhhcc--cccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCC
Q 013892 61 LNPKVLKC--EYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQG 138 (434)
Q Consensus 61 ~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~ 138 (434)
+++++.++ +.+...++...+.+++++. ..+++|+++.|+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~~~~~~----------------------------- 47 (398)
T 3ele_A 4 VNESMYQLGSVRSAIRELFEYGKKRAAIV-------GKENVYDFSIGNPSI----------------------------- 47 (398)
T ss_dssp SCHHHHHHHHCCCHHHHHHHHHHHHHHHH-------CGGGCEECCSCCCCS-----------------------------
T ss_pred hhHHHhccccCchhHHHHHHHHHHHHhhc-------CCCCeEEeecCCCCC-----------------------------
Confidence 55677776 3444445777777776653 225899999999886
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~ 217 (434)
..|+.+.+++.+.+..........|++..|..++|+++++++.+.+|+++++++|++|+|+++++..+++.++ ++| |+
T Consensus 48 ~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~-~~g~d~ 126 (398)
T 3ele_A 48 PAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALT-SDAYDE 126 (398)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CSTTCE
T ss_pred CCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHc-CCCCCE
Confidence 3578899998888876321014679999999999999999999999988999999999999999999999998 799 99
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|+++.|+|+.+...++..|++++.++++++ +|++|+++|++++++ ++++|++++||||||.+++.+++++|++
T Consensus 127 vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~ 199 (398)
T 3ele_A 127 FITIAPYFPEYKVFVNAAGARLVEVPADTE-HFQIDFDALEERINA------HTRGVIINSPNNPSGTVYSEETIKKLSD 199 (398)
T ss_dssp EEEESSCCTHHHHHHHHTTCEEEEECCCTT-TSSCCHHHHHHTCCT------TEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEeCCCchhhHHHHHHcCCEEEEEecCCc-CCcCCHHHHHHHhCc------CCCEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999754 689999999999876 7999999999999999999999999999
Q ss_pred HHHH------cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 298 FCKK------EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 298 ~~~~------~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
+|++ +|+++|+||+|.++.+++.. ..... . ..+ ++++++||||.| |++|+|+||+++ +++
T Consensus 200 ~~~~~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~----~---~~~--~~i~~~s~sK~~-~~~G~r~G~~~~---~~~ 265 (398)
T 3ele_A 200 LLEKKSKEIGRPIFIIADEPYREIVYDGIK-VPFVT----K---YYD--NTLVCYSYSKSL-SLPGERIGYVLV---PDE 265 (398)
T ss_dssp HHHHHHHHHTSCCEEEEECTTTTCBCTTCC-CCCGG----G---TCS--SEEEEEESTTTS-SCTTTCCEEEEC---CTT
T ss_pred HHHhhhhccCCCeEEEEeccccccccCCCC-cCChH----h---hcC--CeEEEEehhhcC-CCccceeEEEEE---cch
Confidence 9999 99999999999999887642 22221 1 112 479999999999 899999999986 554
Q ss_pred ------HHHHHHHHhh--cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 372 ------VREQIYKVAS--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 372 ------~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++.+..... .+.+++.+.|.++..+++... .++.++++++.+.+.|++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 266 VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG----DINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC----CHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHc
Confidence 4444444333 355788899998888887542 5788999999999999876
No 12
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.1e-38 Score=322.81 Aligned_cols=286 Identities=21% Similarity=0.339 Sum_probs=240.9
Q ss_pred CcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHH
Q 013892 95 SFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRD 174 (434)
Q Consensus 95 p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~ 174 (434)
|.+++|+|++|+|+..|. ..+|+.+++++.+.+... ....|++..|..++|+
T Consensus 52 ~~~~~i~l~~g~~~~~g~-------------------------~~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~ 103 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGN-------------------------LPTDPEVTQAMKDALDSG---KYNGYAPSIGFLSSRE 103 (427)
T ss_dssp TTSCCEECCCSCTTTTSS-------------------------SCCCHHHHHHHHHHHHHC---CSSSCCCTTCCHHHHH
T ss_pred CCCCEEeCCCcCCCccCC-------------------------CCCCHHHHHHHHHHHhcC---cCCCCCCCCCcHHHHH
Confidence 446789999999875332 135888999998888764 2568999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 175 TIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 175 ~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
++++++.+. +.++++++|++|+|+++++..++..++ ++||+|+++.|+|..|...++..|++++.++++++++|.+|+
T Consensus 104 ~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 181 (427)
T 3dyd_A 104 EIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLA-NPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDL 181 (427)
T ss_dssp HHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECH
T ss_pred HHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCH
Confidence 999999776 777889999999999999999999998 799999999999999999999999999999998777889999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
++|++++++ ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++.. +.++..+ .
T Consensus 182 ~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~-~~~~~~~----~ 250 (427)
T 3dyd_A 182 KQLEYLIDE------KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK-YEPLATL----S 250 (427)
T ss_dssp HHHHSSCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCC-CCCGGGG----C
T ss_pred HHHHHHhcc------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCc-CccHHHh----C
Confidence 999998876 7899999999999999999999999999999999999999999999887642 4444322 2
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC----HHHHHHHHHHhhcccCCchHHHHHHHHHcCC--CCCChHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS----AEVREQIYKVASVNLCSNISGQILASLVMSP--PKVGDESY 408 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~ 408 (434)
.+..+|+++||||.| |++|+|+||+++.... +++++.+........+++.++|.++..+|+. .+++++.+
T Consensus 251 ---~~~~vi~~~S~sK~~-~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~ 326 (427)
T 3dyd_A 251 ---TDVPILSCGGLAKRW-LVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTL 326 (427)
T ss_dssp ---SSCCEEEEEESTTTS-SCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred ---CCCcEEEEeeccccC-CCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHH
Confidence 233589999999999 7899999999872200 5788888776654568999999999999874 34466778
Q ss_pred HHHHHHHHHHHHHHHHH
Q 013892 409 ESYCAERDGILSSLARR 425 (434)
Q Consensus 409 ~~~~~~r~~l~~~L~~~ 425 (434)
++++++++.+.+.|+++
T Consensus 327 ~~~~~~~~~l~~~L~~~ 343 (427)
T 3dyd_A 327 SFLKSNADLCYGALAAI 343 (427)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 88888888888888764
No 13
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-38 Score=318.68 Aligned_cols=306 Identities=21% Similarity=0.277 Sum_probs=237.6
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
+++++.+++......+...+.++.++ | +++|+++.|+|.. ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~idl~~g~~~~-----------------------------~~ 51 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAARRR---G------EDIIDLSMGNPDG-----------------------------PT 51 (412)
T ss_dssp -----------CHHHHHHHHHHHHHT---T------CCCEECSSCCCCS-----------------------------CC
T ss_pred hhHHHhhcCchHHHHHHHHHHHHhhc---C------CCEEecCCCCCCC-----------------------------CC
Confidence 34555566555555555555554433 2 4799999999865 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vl 219 (434)
|+.+.+++.+.+... ....|++..|..++|+++++++.+++|.++++ ++|++|+|+++++..+++.++ ++||+|+
T Consensus 52 ~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~-~~gd~Vl 127 (412)
T 2x5d_A 52 PPHIVEKLCTVAQRE---DTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATL-DHGDTIL 127 (412)
T ss_dssp CHHHHHHHHHTC------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHC-CTTCEEE
T ss_pred CHHHHHHHHHHHhCC---CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhC-CCCCEEE
Confidence 677888877766542 14579888999999999999999888988888 799999999999999999998 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.|+|+.+...++..|++++.++++++++|.+|+++|++++++ ++++|++++||||||.+++.+++++|+++|
T Consensus 128 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 201 (412)
T 2x5d_A 128 VPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIP------KPRMMILGFPSNPTAQCVELDFFERVVALA 201 (412)
T ss_dssp EEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEES------CCSEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred EcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhccc------CceEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999998765677889999888764 789999999999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
+++|+++|+||+|.++.+++.. +.++..+ ... .+ +++++.|+||.| |++|+|+||+++ ++++++.+...
T Consensus 202 ~~~~~~li~De~~~~~~~~g~~-~~~~~~~----~~~-~~-~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~ 270 (412)
T 2x5d_A 202 KQYDVMVVHDLAYADIVYDGWK-APSIMQV----PGA-KD-IAVEFFTLSKSY-NMAGWRIGFMVG---NPELVSALARI 270 (412)
T ss_dssp HHHTCEEEEECTTTTCBCTTCC-CCCGGGS----TTG-GG-TEEEEEECC-CC-SCTTSCCEEEEE---CHHHHHHHHHH
T ss_pred HHcCCEEEEeccccccccCCCC-CCChhhc----cCc-cC-cEEEEecCcccc-CCcccceEEEEc---CHHHHHHHHHH
Confidence 9999999999999998886532 3344332 100 12 479999999999 889999999987 89999999876
Q ss_pred hh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 AS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...+++.+.|.++..+++.. +++++.++.++++++.+.+.|+++
T Consensus 271 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 271 KSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp HHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 65 45688999999988888753 446778888999999999999875
No 14
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=8.2e-39 Score=322.42 Aligned_cols=280 Identities=20% Similarity=0.274 Sum_probs=240.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|.. .+|+.+++++.+.+.... ....|++..|..++|+++
T Consensus 28 ~~~i~l~~g~~~~-----------------------------~~~~~v~~a~~~~~~~~~--~~~~y~~~~g~~~lr~~l 76 (422)
T 3fvs_A 28 HDVVNLGQGFPDF-----------------------------PPPDFAVEAFQHAVSGDF--MLNQYTKTFGYPPLTKIL 76 (422)
T ss_dssp SCCEECCCSSCSS-----------------------------CCCHHHHHHHHHHHHSCG--GGGSCCCTTCCHHHHHHH
T ss_pred CCceEeCCCCCCC-----------------------------CCCHHHHHHHHHHHhCCC--ccCCCCCCCCCHHHHHHH
Confidence 4799999999886 458889999988887632 146899999999999999
Q ss_pred HHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCC---------
Q 013892 177 AAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE--------- 246 (434)
Q Consensus 177 a~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~--------- 246 (434)
++++.+.+|+++++ ++|++|+|+++++..+++.++ ++||+|+++.|+|..|...++..|++++.++++.
T Consensus 77 a~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~ 155 (422)
T 3fvs_A 77 ASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV-DEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELG 155 (422)
T ss_dssp HHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCC
T ss_pred HHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHc-CCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccc
Confidence 99999999988888 799999999999999999998 7999999999999999999999999999999876
Q ss_pred -CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccc
Q 013892 247 -ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHS 325 (434)
Q Consensus 247 -~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s 325 (434)
+.+|.+|+++|++++++ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++.. +.+
T Consensus 156 ~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~ 228 (422)
T 3fvs_A 156 SSSNWQLDPMELAGKFTS------RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQ-HIS 228 (422)
T ss_dssp BGGGSBCCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC-CCC
T ss_pred cccCCCCCHHHHHhhcCC------CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCC-CCC
Confidence 24678999999998875 7999999999999999999999999999999999999999999999887642 344
Q ss_pred hHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC----
Q 013892 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP---- 400 (434)
Q Consensus 326 ~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~---- 400 (434)
+..... .. .++|+++||||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++.
T Consensus 229 ~~~~~~----~~--~~~i~~~S~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 298 (422)
T 3fvs_A 229 IASLPG----MW--ERTLTIGSAGKTF-SATGWKVGWVLG---PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLL 298 (422)
T ss_dssp GGGSTT----TG--GGEEEEEEHHHHH-TCGGGCCEEEEC---CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHT
T ss_pred hhhccc----cc--CcEEEEecchhcc-CCccceEEEEEe---CHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhcccc
Confidence 433211 11 2579999999999 889999999987 8999999887765 4567889999998888863
Q ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 ----PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ----~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++++.++.++++++.+.+.|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (422)
T 3fvs_A 299 FRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327 (422)
T ss_dssp TTCTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3556788889999999999998865
No 15
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-39 Score=326.18 Aligned_cols=280 Identities=19% Similarity=0.289 Sum_probs=238.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
.++|+++.|.|+. ..|+.+.+++.+.+.+. ....|++..|.+++|+++
T Consensus 57 ~~~i~l~~g~~~~-----------------------------~~~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~i 104 (447)
T 3b46_A 57 RELINLGQGFFSY-----------------------------SPPQFAIKEAQKALDIP---MVNQYSPTRGRPSLINSL 104 (447)
T ss_dssp SCCEECCCCSCSS-----------------------------CCCHHHHHHHHHHTTSG---GGGSCCCTTCCHHHHHHH
T ss_pred CCeEEccCCCCCC-----------------------------CCCHHHHHHHHHHHhCc---CCCCCCCCCCCHHHHHHH
Confidence 4799999999876 34778888888887642 256899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC--------
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT-------- 248 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~-------- 248 (434)
++++.+.+|.++++++|++|+|+++++..+++.++ ++||+|+++.|+|+.|...++..|++++.+++++++
T Consensus 105 a~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 183 (447)
T 3b46_A 105 IKLYSPIYNTELKAENVTVTTGANEGILSCLMGLL-NAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTR 183 (447)
T ss_dssp HHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBC
T ss_pred HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCcccccccccc
Confidence 99999888988888999999999999999999998 799999999999999999999999999999987653
Q ss_pred --CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccch
Q 013892 249 --GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSF 326 (434)
Q Consensus 249 --~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~ 326 (434)
+|.+|+++|++++++ ++++|++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. +.++
T Consensus 184 ~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~--~~~~ 255 (447)
T 3b46_A 184 GEEWTIDFEQFEKAITS------KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS--FTRI 255 (447)
T ss_dssp STTSEECHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCG
T ss_pred ccCcccCHHHHHHhhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC--CcCH
Confidence 688999999998865 799999999999999999999999999999999999999999999988763 3444
Q ss_pred HHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC---CC
Q 013892 327 KKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP---PK 402 (434)
Q Consensus 327 ~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~---~~ 402 (434)
..+..... + +++++.|+||.| |++|+|+||+++ .++++++.+..... ...+++.+.|.++..+|+. .+
T Consensus 256 ~~~~~~~~---~--~~i~i~S~sK~~-~~~G~riG~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~ 327 (447)
T 3b46_A 256 ATLSPEIG---Q--LTLTVGSAGKSF-AATGWRIGWVLS--LNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIG 327 (447)
T ss_dssp GGSCHHHH---T--TEEEEEEHHHHT-TCTTSCCEEEEC--SCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCCC---C--cEEEEecCchhc-CCcchhhEEEEe--CCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchH
Confidence 33201111 1 479999999999 889999999964 37889998887654 5567889999988888875 34
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++.++.++++++.+.+.|++.
T Consensus 328 ~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 328 YFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 56778899999999999999876
No 16
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-37 Score=311.08 Aligned_cols=302 Identities=24% Similarity=0.349 Sum_probs=253.8
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
.++++...+.+....+..++.++.++ | +++|+++.|+|.. ..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~~~~~~-----------------------------~~ 55 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKALIKK---G------EDVINLTAGEPDF-----------------------------PT 55 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHT---T------CCCEECCCSSCSS-----------------------------CC
T ss_pred HHHHHhhcCccHHHHHHHHHHHHHhc---C------CCEEEccCCCCCC-----------------------------CC
Confidence 45666677766666666776666543 2 4789999999864 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
|+.+.+++.+.+... ...|++..|..++|+++++++.+++|.++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 56 ~~~v~~a~~~~~~~~----~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~-~~gd~Vl~ 130 (389)
T 1o4s_A 56 PEPVVEEAVRFLQKG----EVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL-DPGDEVIV 130 (389)
T ss_dssp CHHHHHHHHHHHTTC----CCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC-CCCCEEEE
Confidence 777888888888652 3579888899999999999999888888889999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+.|+|+.+...++..|++++.++++++++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 204 (389)
T 1o4s_A 131 FSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG------KTKAVLINSPNNPTGVVYRREFLEGLVRLAK 204 (389)
T ss_dssp EESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999997655789999999998875 7899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|+++|+||+|.++.+++. ..++..+ ... .+ .++++.||||.| |++|+|+||+++ ++++++.+....
T Consensus 205 ~~~~~li~Dea~~~~~~~g~--~~~~~~~----~~~-~~-~~i~~~s~sK~~-~~~G~r~G~l~~---~~~~~~~l~~~~ 272 (389)
T 1o4s_A 205 KRNFYIISDEVYDSLVYTDE--FTSILDV----SEG-FD-RIVYINGFSKSH-SMTGWRVGYLIS---SEKVATAVSKIQ 272 (389)
T ss_dssp HHTCEEEEECTTTTSBCSSC--CCCHHHH----CSS-ST-TEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccccccccCCC--CCCHhhc----CCC-CC-cEEEEeechhhc-CCcccceEEEEe---CHHHHHHHHHHh
Confidence 99999999999999888653 3444433 111 12 369999999999 889999999987 889999988776
Q ss_pred h-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+++.+.|.++..+++.. .++.++.++++++.+.+.|++.
T Consensus 273 ~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 273 SHTTSCINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp HHHTCSCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccCCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHhc
Confidence 5 45578889999998888765 7788999999999999999875
No 17
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=4.3e-38 Score=316.54 Aligned_cols=319 Identities=14% Similarity=0.135 Sum_probs=241.1
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
+.+...........+..++.++.++. +.+++|++++|+|..... +...|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~i~l~~g~~~~~~~------------------------~~~~~ 57 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEKY-------GREAVINAALGTLLDDKG------------------------KIIAL 57 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHHH-------CGGGCEECCSCCCBCTTS------------------------CBCCC
T ss_pred hhcccCCCCChHHHHHHHHhhhhhhc-------cccceEeccccCccCCCC------------------------CcCCh
Confidence 44444444333334566666665542 226899999999854221 11356
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP 221 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~ 221 (434)
+.+.+++.+.... ....|++..|.+++|+++++++.+.++.. ++++|++|+|+++++..+++.++ ++||+|+++
T Consensus 58 ~~v~~a~~~~~~~----~~~~Y~~~~g~~~lr~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~-~~gd~Vl~~ 131 (413)
T 3t18_A 58 PSVYDRLDEMDRS----HIASYAPIEGEKDYRKIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYL-DEGDPLICH 131 (413)
T ss_dssp HHHHHHHHHSCHH----HHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHC-CSSCEEEEE
T ss_pred HHHHHHHHhcCcc----cccCcCCCCCCHHHHHHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhc-CCCCEEEEC
Confidence 6676665543221 25679999999999999999997766532 45599999999999999999998 799999999
Q ss_pred CCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee-EEEEecC-CCCCccCCCHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR-ALVVINP-GNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 222 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~-~i~l~~p-~NPtG~~~~~~~l~~i~~~~ 299 (434)
.|+|+.|...++..|++++.+++.+++ |++|+++|++++++...+ +++ ++++++| |||||.+++.+++++|+++|
T Consensus 132 ~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~ 208 (413)
T 3t18_A 132 DYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDVYKEAIDEGIRD--SDRIASLINSPGNNPTGYSLSDEEWDEVITFL 208 (413)
T ss_dssp SSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHHHHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHHHHHHHHHHhhc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999986543 899999999999763221 356 7888899 99999999999999999999
Q ss_pred H------HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH
Q 013892 300 K------KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 300 ~------~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 373 (434)
+ ++|++||+||+|.++.+++.. ..++......+. ++..+|+++||||.| |++|+|+||+++...+++++
T Consensus 209 ~~~~~~~~~~~~li~De~y~~~~~~~~~-~~~~~~~~~~~~---~~~~~i~~~S~sK~~-~~~G~riG~~~~~~~~~~~~ 283 (413)
T 3t18_A 209 KEKAEDKDKKITLIVDVAYLEFAGDGDQ-QRKFFEKFSNLP---RNLFVVVAFSMSKSH-TAYGLRSGAAVGISSSKEII 283 (413)
T ss_dssp HHHTTSTTCEEEEEEECTTGGGSSSSST-TTGGGGGGTTCC---TTEEEEEEEEHHHHT-TCGGGCCEEEEEEESCHHHH
T ss_pred HHHhhccCCcEEEEEecccccccCChhh-HHHHHHHHhhcC---CCeeEEEEEecCccC-CCcCcCcEEEEEecCCHHHH
Confidence 9 899999999999998887642 333333222222 454468999999999 89999999997644478999
Q ss_pred HHHHHHhh-----cccCCchHHHHHHHHHcCCCC------CChHHHHHHHHHHHHHHHHHHHH
Q 013892 374 EQIYKVAS-----VNLCSNISGQILASLVMSPPK------VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 374 ~~l~~~~~-----~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+.+... .+.+++.++|.++..++++.+ +.++.++.++++++.+.+.|++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 284 EEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99887643 235689999999998887642 23345667777777777777664
No 18
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1e-37 Score=311.77 Aligned_cols=272 Identities=18% Similarity=0.128 Sum_probs=220.3
Q ss_pred CCHHHHHHHHH-HHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHH--HHhcCC
Q 013892 140 FSADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQ--LLIRSE 214 (434)
Q Consensus 140 ~p~~v~~~~~~-~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~l~--~l~~~~ 214 (434)
.++.+++++.+ .+... ....|++..|..++|+++++++.+.++..++++ +|++|+|+++++..+++ .++ ++
T Consensus 45 ~~~~v~~a~~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~-~~ 120 (397)
T 3fsl_A 45 QLQAVAEAEARLNAQPH---GASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRY-FP 120 (397)
T ss_dssp CCHHHHHHHHHHHHSCC---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH-CT
T ss_pred CcHHHHHHHHhhccCcc---ccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhc-CC
Confidence 35889999888 77653 267899999999999999999977655445788 89999999999999954 445 79
Q ss_pred CCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHH
Q 013892 215 NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 215 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
||+|+++.|+|..|...++..|++++.+++..+++|++|++.|++++++. ..+++++++++||||||.+++.+++++
T Consensus 121 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~ 197 (397)
T 3fsl_A 121 ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLLHPCCHNPTGADLTNDQWDA 197 (397)
T ss_dssp TCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEECSSSCTTTCCCCCHHHHHH
T ss_pred CCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999999855556899999999999731 126788888999999999999999999
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
|+++|+++|+++|+||+|.++.++...+..++..... ..+ ++|+++||||.| |++|+|+||+++...++++++
T Consensus 198 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~----~~~--~~i~~~S~SK~~-~~~G~riG~~~~~~~~~~~~~ 270 (397)
T 3fsl_A 198 VIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS----AGL--PALVSNSFSKIF-SLYGERVGGLSVMCEDAEAAG 270 (397)
T ss_dssp HHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH----TTC--CEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHH
T ss_pred HHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh----cCC--CEEEEecccccc-cCcCCCeeEEEEecCCHHHHH
Confidence 9999999999999999999998874322344443321 112 479999999999 899999999976444677666
Q ss_pred HHHHH-----hhcccCCchHHHHHHHHHcCCC-------CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QIYKV-----ASVNLCSNISGQILASLVMSPP-------KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 375 ~l~~~-----~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+... ...+.+++.++|.++..++.+. +++++.+++++++++.+.+.|++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 271 RVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 54322 1256677899999998888863 345677888899999999988876
No 19
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.4e-37 Score=310.15 Aligned_cols=278 Identities=25% Similarity=0.385 Sum_probs=235.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|.. ..|+.+.+++.+.+... ...|++..|..++|+++
T Consensus 26 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~----~~~y~~~~g~~~l~~~l 72 (389)
T 1gd9_A 26 KDVISLGIGEPDF-----------------------------DTPQHIKEYAKEALDKG----LTHYGPNIGLLELREAI 72 (389)
T ss_dssp SSCEECCCCSCSS-----------------------------CCCHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHH
T ss_pred cCeEecCCCCCCC-----------------------------CCCHHHHHHHHHHHhCC----CCCCCCCCCcHHHHHHH
Confidence 3689999998864 34778899888888652 45699888999999999
Q ss_pred HHHHHhhcCCCCCCCC-EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPND-IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~-i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+.+|.++++++ |++|+|+++++..+++.++ ++||+|+++.|+|+.+...++..|++++.++++++++|.+|++
T Consensus 73 a~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 151 (389)
T 1gd9_A 73 AEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFL-KDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVD 151 (389)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTC-CTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHH
T ss_pred HHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHH
Confidence 9999988898888999 9999999999999999987 7999999999999999999999999999999886556889999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++ ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++..+ ..
T Consensus 152 ~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~----~~ 220 (389)
T 1gd9_A 152 ELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDAR-HYSIASL----DG 220 (389)
T ss_dssp HHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC-CCCGGGS----TT
T ss_pred HHHHhcCc------CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCC-CCCHhhc----cC
Confidence 99998875 7899999999999999999999999999999999999999999998886531 2333322 10
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-C--CChHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP-K--VGDESYESY 411 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~--~~~~~~~~~ 411 (434)
. .+ .++++.|+||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++.. . ++++.++++
T Consensus 221 ~-~~-~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 294 (389)
T 1gd9_A 221 M-FE-RTITVNGFSKTF-AMTGWRLGFVAA---PSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEY 294 (389)
T ss_dssp C-GG-GEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred C-CC-CEEEEecChhhc-CCcccceEEEEE---CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 0 11 479999999999 889999999987 8899999887665 45688999999998888763 2 456777888
Q ss_pred HHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARR 425 (434)
Q Consensus 412 ~~~r~~l~~~L~~~ 425 (434)
+++++.+.+.|++.
T Consensus 295 ~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 295 DRRRKLVWKRLNEM 308 (389)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 88888888888764
No 20
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4.6e-38 Score=311.95 Aligned_cols=275 Identities=17% Similarity=0.171 Sum_probs=231.1
Q ss_pred cceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHH
Q 013892 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (434)
Q Consensus 98 ~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (434)
++|+++.|++.. ..|+.+++++.+.+. ....|++..|..++|++++
T Consensus 24 ~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~-----~~~~y~~~~g~~~lr~~la 69 (376)
T 3ezs_A 24 RGLDLGIGEPQF-----------------------------ETPKFIQDALKNHTH-----SLNIYPKSAFEESLRAAQR 69 (376)
T ss_dssp CCCBCSSCCCCS-----------------------------CCCHHHHHHHHTTGG-----GGGSCCCTTCCHHHHHHHH
T ss_pred CEEEeCCCCCCC-----------------------------CCCHHHHHHHHHhhh-----hcCCCCCCCCCHHHHHHHH
Confidence 688888888765 457888888877663 2678999999999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC--CCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE--NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~--gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
+++.+++|.++++++|++|+|+++++..+++.++ ++ ||+|+++.|+|..+...++..|++++.+++++++++.+
T Consensus 70 ~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~-~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--- 145 (376)
T 3ezs_A 70 GFFKRRFKIELKENELISTLGSREVLFNFPSFVL-FDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP--- 145 (376)
T ss_dssp HHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHT-TTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---
T ss_pred HHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHc-CCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---
Confidence 9999999988899999999999999999999998 78 99999999999999999999999999999987655544
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
++++++.+ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++......++.
T Consensus 146 ~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~ 217 (376)
T 3ezs_A 146 SLNEKELQ------EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTP--PPSLLEACMLAGN 217 (376)
T ss_dssp CCCHHHHH------HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC--CCCHHHHHHHTTC
T ss_pred hHHhhhcc------CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CCCHHHccccccc
Confidence 56666766 689999999999999999999999999999999999999999999888763 4555444322210
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
...+ ++++++||||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++..+++++.++.++++
T Consensus 218 ~~~~-~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 292 (376)
T 3ezs_A 218 EAFK-NVLVIHSLSKRS-SAPGLRSGFIAG---DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANN 292 (376)
T ss_dssp TTCT-TEEEEEESTTTT-TCGGGCCEEEEE---CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred cccC-cEEEEecchhcc-CCccceeEEEee---CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 0122 479999999999 889999999987 9999999988765 456889999999999888766667778888888
Q ss_pred HHHHHHHHH
Q 013892 415 RDGILSSLA 423 (434)
Q Consensus 415 r~~l~~~L~ 423 (434)
++.+.+.|+
T Consensus 293 ~~~l~~~l~ 301 (376)
T 3ezs_A 293 LKLARKIFK 301 (376)
T ss_dssp HHHHHHHST
T ss_pred HHHHHHHhc
Confidence 888887765
No 21
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=4.5e-38 Score=315.66 Aligned_cols=287 Identities=17% Similarity=0.231 Sum_probs=238.3
Q ss_pred HHHHHhhcCCCCccccccc--CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEE
Q 013892 118 FREVLALCDHPSILDRSET--QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIF 194 (434)
Q Consensus 118 ~r~v~~~~~~p~~l~~~~~--~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~ 194 (434)
++.++.....+++++|+.+ ....|+.+++++.+.+... ....|++..|..++|+++++++.+.+|.++++ ++|+
T Consensus 13 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~ 89 (410)
T 3e2y_A 13 WVEFTKLAADPSVVNLGQGFPDISPPSYVKEELSKAAFID---NMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEIL 89 (410)
T ss_dssp HHHTTTTTTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCG---GGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEE
T ss_pred HHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCc---cccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEE
Confidence 4444444444555555554 2256888999998888653 25689999999999999999999999988888 8999
Q ss_pred EcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCC---------CCCCCCCHHHHHHHHHHHH
Q 013892 195 LTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE---------ATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 195 ~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~~~l~~~l~~~~ 265 (434)
+|+|+++++..+++.++ ++||+|+++.|+|..|...++..|++++.++++. +.+|.+|+++|++++++
T Consensus 90 ~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-- 166 (410)
T 3e2y_A 90 VAVGAYGSLFNSIQGLV-DPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-- 166 (410)
T ss_dssp EESHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT--
T ss_pred EeCCcHHHHHHHHHHhc-CCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC--
Confidence 99999999999999998 7999999999999999999999999999999863 24677999999998865
Q ss_pred hcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEE
Q 013892 266 AKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i 345 (434)
++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++.... .. .+ ++|++
T Consensus 167 ----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~----~~-~~-~~i~~ 235 (410)
T 3e2y_A 167 ----KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHT-HVKIATLP----GM-WE-RTITI 235 (410)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC-CCCGGGST----TC-GG-GEEEE
T ss_pred ----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCC-CCCHHHcC----Cc-cC-eEEEE
Confidence 7999999999999999999999999999999999999999999999887642 34443321 11 12 57999
Q ss_pred ecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC--------CCCChHHHHHHHHHHH
Q 013892 346 QSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP--------PKVGDESYESYCAERD 416 (434)
Q Consensus 346 ~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~--------~~~~~~~~~~~~~~r~ 416 (434)
+||||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..++++ .+++++.++.++++++
T Consensus 236 ~S~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (410)
T 3e2y_A 236 GSAGKTF-SVTGWKLGWSIG---PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRD 311 (410)
T ss_dssp EEHHHHS-SCGGGCCEEEEC---CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHH
T ss_pred ecchhhc-CCCCceEEEEEE---CHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHH
Confidence 9999999 889999999987 8999999987765 4667899999988888763 3556788889999999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|+++
T Consensus 312 ~l~~~L~~~ 320 (410)
T 3e2y_A 312 RMVRLLNSV 320 (410)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHC
Confidence 999988765
No 22
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=6.5e-38 Score=311.21 Aligned_cols=276 Identities=19% Similarity=0.208 Sum_probs=232.2
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|.. ..|+.+.+++.+.+... ....|++..|..++|+++
T Consensus 25 ~~~idl~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~l~~~i 72 (376)
T 2dou_A 25 VGLIDLSIGSTDL-----------------------------PPPEAPLKALAEALNDP---TTYGYCLKSCTLPFLEEA 72 (376)
T ss_dssp CCCEECSSCCCCC-----------------------------CCCHHHHHHHHHHTTCG---GGSSCCCHHHHHHHHHHH
T ss_pred CCEEeccCCCCCC-----------------------------CCCHHHHHHHHHHHhCC---CcCCCCCCCCCHHHHHHH
Confidence 5789999999864 34777888888877542 256798877899999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+++|.+++++ +|++|+|+++++..++++++ ++||+|+++.|+|+.+...++..|++++.+++ +++|.+|++
T Consensus 73 a~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~ 149 (376)
T 2dou_A 73 ARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALT-EPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLK 149 (376)
T ss_dssp HHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGG
T ss_pred HHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhc-CCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHH
Confidence 999998889887777 99999999999999999998 79999999999999999999999999999998 456789999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++ ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++.....
T Consensus 150 ~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~---- 217 (376)
T 2dou_A 150 AVPEGVWR------EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE--APSPLALPG---- 217 (376)
T ss_dssp GSCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC--CCCGGGSTT----
T ss_pred HHHHhhcc------CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC--CCChhhcCC----
Confidence 99999976 689999999999999999999999999999999999999999999887653 333322211
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-PKVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~ 413 (434)
..+ ++++++||||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..++++ .+++++.++.+++
T Consensus 218 ~~~--~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 291 (376)
T 2dou_A 218 AKE--RVVELFSLSKSY-NLAGFRLGFALG---SEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRE 291 (376)
T ss_dssp GGG--TEEEEEEHHHHH-TCGGGCCEEEEE---CHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCC--cEEEEecchhhc-CChhheeEEEec---CHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 112 479999999999 789999999987 8999999987765 4457789999999999986 3445677778888
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|+++
T Consensus 292 ~~~~l~~~L~~~ 303 (376)
T 2dou_A 292 RALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh
Confidence 888888888764
No 23
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.7e-37 Score=316.22 Aligned_cols=283 Identities=20% Similarity=0.323 Sum_probs=232.9
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|.|+... .+++.+.+++.+.+.+... ...+|++..|..+||+++
T Consensus 76 ~~~i~l~~g~p~~~~---------------------------~p~~~v~~a~~~~l~~~~~-~~~~Y~~~~g~~~lr~~i 127 (448)
T 3aow_A 76 SDIISLAGGLPNPKT---------------------------FPKEIIRDILVEIMEKYAD-KALQYGTTKGFTPLRETL 127 (448)
T ss_dssp SSSEECCCCCCCGGG---------------------------SCHHHHHHHHHHHHHHSHH-HHHSCCCTTCCHHHHHHH
T ss_pred CCcEeCCCCCCCchh---------------------------CCHHHHHHHHHHHHHhhhH-HHhCCCCCCCcHHHHHHH
Confidence 368999999987511 1345577777777765321 146799999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++.+.+|.+ ++++|++|+|+++++..++++++ ++||+|+++.|+|..+...++..|++++.++++++ ++|+++
T Consensus 128 a~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~-~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~ 202 (448)
T 3aow_A 128 MKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFL-NPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEI 202 (448)
T ss_dssp HHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHH
T ss_pred HHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHc-CCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---CCCHHH
Confidence 99998888877 88999999999999999999998 79999999999999999999999999999999764 689999
Q ss_pred HHHHHHHHHhcCCCeeEEE-EecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 257 VKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
|+++++....++.++++|+ +++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++.. +.++..+ +
T Consensus 203 L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~-~~~~~~~----~- 276 (448)
T 3aow_A 203 LEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNP-EKKIKAL----D- 276 (448)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCC-CCCTGGG----C-
T ss_pred HHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCC-CcCHHhc----C-
Confidence 9999973211223688885 5699999999999999999999999999999999999999887642 3444332 2
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC---CCChHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP---KVGDESYESY 411 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~ 411 (434)
...++|++.||||.| | +|+|+||+++ ++++++.+..... ...+++.+.|.++..+|+.. +++++.++.|
T Consensus 277 --~~~~vi~~~S~SK~~-~-~GlriG~v~~---~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 349 (448)
T 3aow_A 277 --NEGRVIYLGTFSKIL-A-PGFRIGWMVG---DPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFY 349 (448)
T ss_dssp --TTSCEEEEEESTTTT-C-GGGCCEEEEE---CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred --CCCCEEEEccchhhc-c-ccccEEEEEe---CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 122579999999999 7 9999999988 8999999987665 45678999999999998764 4466778888
Q ss_pred HHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARR 425 (434)
Q Consensus 412 ~~~r~~l~~~L~~~ 425 (434)
+++++.+.+.|++.
T Consensus 350 ~~~~~~l~~~L~~~ 363 (448)
T 3aow_A 350 KPRRDAMLEALEEF 363 (448)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999988875
No 24
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=2e-37 Score=315.59 Aligned_cols=313 Identities=15% Similarity=0.122 Sum_probs=237.5
Q ss_pred hcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHH
Q 013892 66 LKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSI 145 (434)
Q Consensus 66 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~ 145 (434)
..+++.....+...+++++++ +.+.+|++++|.|......| .+.+.+.
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~--------~~~~~i~l~~g~~~d~~~~~------------------------~v~~av~ 73 (448)
T 3meb_A 26 SGFPASPPDAILNLTVLYNAD--------TNPKKVNLGVGAYRDESGKP------------------------WILPAVK 73 (448)
T ss_dssp TTCCCCCCCTTHHHHHHHHHC--------CCTTCEEESSCCCCCTTSCC------------------------CCCHHHH
T ss_pred hcCCCCCCChHHHHHHHHHhC--------CCCCeEEeecccccCCCCCE------------------------echHHHH
Confidence 345555666678888888776 33568999999994322212 1345555
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC---CCCCCEEE--cCChHHHHHH--HHHHHhcCCCCEE
Q 013892 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP---ADPNDIFL--TDGASPAVHM--MMQLLIRSENDGI 218 (434)
Q Consensus 146 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---~~~~~i~~--t~G~~~al~~--~l~~l~~~~gd~V 218 (434)
+++.+...+... ....|.+..|.+++|+++++++. |.. +++++|++ |+|+++++.+ .+..++ .+||+|
T Consensus 74 ~a~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~-~~gd~V 148 (448)
T 3meb_A 74 EAEAIISSDLSK-YNKEYPPVAGFPLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLW-MPKAEF 148 (448)
T ss_dssp HHHHHHHHCTTT-TCCSCCCTTCCHHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHH-CTTCCE
T ss_pred HHHHHHhhcccC-CCCCCCCCcchHHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHh-CCCCEE
Confidence 555554422111 36789999999999999999983 433 23689999 9999999988 445556 699999
Q ss_pred EEcCCCChhHHHHHH----HcCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHH
Q 013892 219 LCPIPQYPLYSASIA----LHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (434)
Q Consensus 219 lv~~p~y~~~~~~~~----~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~ 293 (434)
++++|+|+.|...++ ..|++++.+++.+++ +|.+|++.|++++++. ..+++++++++||||||.+++.++|+
T Consensus 149 lv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~ 225 (448)
T 3meb_A 149 YMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWK 225 (448)
T ss_dssp EEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred EECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHH
Confidence 999999999999999 999999999985444 6899999999999852 11467888889999999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec-----
Q 013892 294 AIVDFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG----- 367 (434)
Q Consensus 294 ~i~~~~~~~~~~li~Deay~~~~~~~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~----- 367 (434)
+|+++|+++|+++|+||+|+++.+++.. ...++..+.. ..+ ++|+++||||.| |++|+|+||+.++.
T Consensus 226 ~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~----~~~--~~i~~~S~SK~~-g~~G~RiG~l~~v~~~~~~ 298 (448)
T 3meb_A 226 ELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVD----AGV--EVLVAQSFSKNF-GLYGERIGCLHVVHAGVEG 298 (448)
T ss_dssp HHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHH----TTC--CEEEEEECTTTS-CCGGGCCEEEEEECCCCSS
T ss_pred HHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhh----cCC--cEEEEecccccC-CCccccceeeeeeeccccc
Confidence 9999999999999999999998876520 1222222221 112 479999999999 89999999984322
Q ss_pred ---CCH----HHHHHHHHHhh-cccCCchHHHHHHHHHcCCC-------CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 368 ---FSA----EVREQIYKVAS-VNLCSNISGQILASLVMSPP-------KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 368 ---~~~----~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.++ ++++.+..... .+.+++.++|.++..+++++ +++++.+++++++|+.+.+.|++.
T Consensus 299 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 299 SVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 245 66777766544 67789999999999999874 235677788888888888888765
No 25
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-37 Score=311.99 Aligned_cols=306 Identities=27% Similarity=0.444 Sum_probs=246.9
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
++.++.++.++..+.+. .+.++.++ | +++|+++.|+|...+ ...
T Consensus 12 ~~~~~~~~~~~~~~~~~-~~~~~~~~---g------~~~i~l~~~~~~~~~--------------------------~~~ 55 (406)
T 1xi9_A 12 ASKRALSVEYAIRDVVL-PARELEKK---G------IKVIRLNIGDPVKFD--------------------------FQP 55 (406)
T ss_dssp CCHHHHTCCC--------CHHHHHHT---T------CCCEECCCCCGGGTT--------------------------CCC
T ss_pred HHHHHhcCChhHHHHHH-HHHHHHHc---C------CCEEEecCCCCCcCC--------------------------CCC
Confidence 45778888888777777 77776554 2 478999999983100 034
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
|+.+++++.+.+... ...|++..|..++|+++++++.+.+|+++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 56 ~~~v~~a~~~~~~~~----~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~Vl~ 130 (406)
T 1xi9_A 56 PEHMKEAYCKAIKEG----HNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALL-DPGDEILV 130 (406)
T ss_dssp CHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHhcC----CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhC-CCCCEEEE
Confidence 778888888888652 3479988899999999999999988988999999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+.|+|+.+...++..|++++.++++++++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 131 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 204 (406)
T 1xi9_A 131 PGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD------RTKAIAVINPNNPTGALYDKKTLEEILNIAG 204 (406)
T ss_dssp EESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc------CceEEEEECCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999987655688999999999876 7899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce-EEEEecCCCCCCCCCCceeEEEEEecCCH----HHHHH
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS-LVSFQSVSKGYYGECGKRGGYMEVTGFSA----EVREQ 375 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~-~i~i~S~SK~~~g~~G~R~G~~~~~~~~~----~~~~~ 375 (434)
++|+++|+||+|.++.+++. ..++..+ + .+ . +|+++||||.| |++|+|+||+++++ ++ ++++.
T Consensus 205 ~~~~~li~De~~~~~~~~~~--~~~~~~~----~---~~-~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~l~~~ 272 (406)
T 1xi9_A 205 EYEIPVISDEIYDLMTYEGE--HISPGSL----T---KD-VPVIVMNGLSKVY-FATGWRLGYMYFVD-PENKLSEVREA 272 (406)
T ss_dssp HHTCCEEEECTTTTCBSSSC--CCCHHHH----C---SS-SCEEEEEESTTTT-CCGGGCCEEEEEEC-TTCTTHHHHHH
T ss_pred HcCCEEEEEcCccccccCCC--CCCHHHc----C---CC-ceEEEEecccccc-CCCccEEEEEEEec-CchhHHHHHHH
Confidence 99999999999999888432 3444332 1 22 4 68999999999 78999999998212 77 89998
Q ss_pred HHHHhhcccCCchHHHHHHHHHcC-CCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASVNLCSNISGQILASLVMS-PPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+........+++.+.|.++..+++ ..+++++.++.++++++.+.+.|++.
T Consensus 273 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 273 IDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp HHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 887665226788899999988884 33335677888888899888888753
No 26
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=3.4e-37 Score=310.48 Aligned_cols=305 Identities=17% Similarity=0.181 Sum_probs=231.3
Q ss_pred hHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcC
Q 013892 76 IVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQI 155 (434)
Q Consensus 76 ~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~ 155 (434)
+..++.+++++. +.+++|++++|+|..... +..+|+.+.+++.+....
T Consensus 24 ~~~~~~~~~~~~-------g~~~~i~l~~g~~~~~~~------------------------~~~~~~~v~~a~~~~~~~- 71 (418)
T 3rq1_A 24 TAGQAQADAKEN-------GRENVVNGTLGAIHDEEG------------------------NLVFLKTVKEEYLSLSDS- 71 (418)
T ss_dssp HHHHHHHHHHHH-------CGGGCEECCSSCCBCTTS------------------------CBCCCHHHHHHHHTCCHH-
T ss_pred HHHHHHhhhhhh-------cCCCeEECCCCcccCCCC------------------------CccccHHHHHHHHHhccc-
Confidence 445555554431 226899999999854221 113566676665443322
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc
Q 013892 156 PGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH 235 (434)
Q Consensus 156 ~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~ 235 (434)
....|++..|.+++|+++++++.+.++.. .+++|++|+|+++++..+++.++ ++||+|+++.|+|+.|...++..
T Consensus 72 ---~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~ 146 (418)
T 3rq1_A 72 ---EHVGYAPIAGIPDFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYT-EPGDEVLTADWYWGAYRVICSDT 146 (418)
T ss_dssp ---HHHSCCCTTCCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHS-CTTCEEEEESSCCTHHHHHHHHT
T ss_pred ---ccCCCCCCCChHHHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhc-CCCCEEEECCCCchhHHHHHHHc
Confidence 25679999999999999999998776532 23499999999999999999998 79999999999999999999999
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee-EEEEecC-CCCCccCCCHHHHHHHHHHHH------HcCCEEE
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR-ALVVINP-GNPTGQVLAEENQRAIVDFCK------KEGLVLL 307 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~-~i~l~~p-~NPtG~~~~~~~l~~i~~~~~------~~~~~li 307 (434)
|++++.+++++++ |++|++.|++++++...+ +++ ++++++| |||||.+++.+++++|+++|+ ++|++||
T Consensus 147 g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~--~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li 223 (418)
T 3rq1_A 147 GRTLVTYSLFDEH-NNFNHEAFQNRVNELAAK--QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIG 223 (418)
T ss_dssp TCEEEEECSBCTT-SSBCHHHHHHHHHHHHHH--CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEE
T ss_pred CCEEEEEeeeCCC-CCcCHHHHHHHHHHhhcc--CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEE
Confidence 9999999987554 899999999999863221 344 7888899 999999999999999999999 8999999
Q ss_pred EccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-----c
Q 013892 308 ADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-----V 382 (434)
Q Consensus 308 ~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-----~ 382 (434)
+||+|.++.+++.. ..++... .....+++.+|+++||||.| |++|+|+||+++...++++++.+.+... .
T Consensus 224 ~De~y~~~~~~~~~-~~~~~~~---~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (418)
T 3rq1_A 224 IDVAYLDYSGEKDE-VRAFFNK---FSHLPKEILTCVCYSLSKGF-TMYGQRVGAMIGISDDEEIADEFFEVNKSTSRAT 298 (418)
T ss_dssp EECTTGGGSSCHHH-HHGGGGG---GTTCCTTEEEEEEEESTTTT-TCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EecccccccCChHH-HHHHHHH---HHhcCCCceEEEEEeCCCCC-cCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 99999997765421 1222222 22122444468999999999 8999999999764457899998877643 2
Q ss_pred ccCCchHHHHHHHHHcCCCC-------CChHHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPPK-------VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+++.++|.++..++++.+ ..++.++.++++++.+.+.|++.
T Consensus 299 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 299 WSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp TSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45789999999999998742 12244566777777777777664
No 27
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=1.1e-37 Score=317.11 Aligned_cols=307 Identities=17% Similarity=0.225 Sum_probs=246.0
Q ss_pred cccccChhhhccccc-ccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccc
Q 013892 57 TVDSLNPKVLKCEYA-VRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSE 135 (434)
Q Consensus 57 ~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~ 135 (434)
+...+|+.+.+++.. .+..+..+......+ .+.+++|++++|+|+.
T Consensus 35 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~i~l~~g~~~~-------------------------- 81 (449)
T 3qgu_A 35 IDVQRNENFGKLRAGYLFPEIARRRKAHQEK-------NPDAKIISLGIGDTTE-------------------------- 81 (449)
T ss_dssp CCCCCCHHHHHCCSCCHHHHHHHHHHHHHHH-------CTTCCCEECSSCCCCC--------------------------
T ss_pred cchhhhHHHHhCCCcchHHHHHHHHHHHHhh-------CCCCCEEEeeCCCCCC--------------------------
Confidence 455678888877753 444556666555443 1336899999998876
Q ss_pred cCCCCCHHHHHHHHHHHHcCCC-CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC
Q 013892 136 TQGLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (434)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~ 214 (434)
..|+.+++++.+.+.+... .....|++..|..+||+++++++. +|+++++++|++|+|+++++..+ ..++ ++
T Consensus 82 ---~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~-~~ 154 (449)
T 3qgu_A 82 ---PLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMF-GS 154 (449)
T ss_dssp ---CCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHH-CS
T ss_pred ---CCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHh-CC
Confidence 4588899999988875321 136689999999999999999997 78888999999999999999998 7777 79
Q ss_pred CCEEEEcCCCChhHHHHHHHcCCe----------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 215 NDGILCPIPQYPLYSASIALHGGT----------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 215 gd~Vlv~~p~y~~~~~~~~~~g~~----------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
||+|+++.|+|+.|...++..|++ ++.+++++++++..|++++ .++++|++++||||||
T Consensus 155 gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG 223 (449)
T 3qgu_A 155 KPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTG 223 (449)
T ss_dssp SSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTC
T ss_pred CCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCC
Confidence 999999999999999999999999 9999998776777776542 1789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.+++.+++++|+++|+++|+++|+||+|.++.+++.. ..++..+ . ...+ .+|++.||||.| |++|+|+||++
T Consensus 224 ~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~-~~~~~~~----~-~~~~-~~i~~~s~sK~~-g~~G~r~G~~~ 295 (449)
T 3qgu_A 224 AAATRAQLTELVNFARKNGSILVYDAAYALYISNPDC-PKTIYEI----P-GADE-VAIETCSFSKYA-GFTGVRLGWTV 295 (449)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTS-CSSGGGS----T-TGGG-TEEEEEECSGGG-TCTTCCCEEEE
T ss_pred CcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCC-CCCHhhc----c-CCCC-cEEEEecchhhc-CCccceeEEEe
Confidence 9999999999999999999999999999998887642 3343322 1 1112 479999999999 89999999998
Q ss_pred EecCCHHHHH--------HHHHHhh-cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 365 VTGFSAEVRE--------QIYKVAS-VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 365 ~~~~~~~~~~--------~l~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+ ++++++ .+..... .+.+++.++|.++..++++. +++++.++.++++++.+.+.|++.
T Consensus 296 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 296 V---PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp C---CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred c---CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7 666654 4544444 55688999999999988762 346678888999999999988875
No 28
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=8.8e-38 Score=313.86 Aligned_cols=301 Identities=19% Similarity=0.217 Sum_probs=242.5
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFS 141 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p 141 (434)
++++.+++......+...+.+ . +.+++|+++.|.|.. ..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~-------~----~g~~~idl~~g~~~~-----------------------------~~~ 62 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIE-------H----GPLPLINMAVGIPDG-----------------------------PTP 62 (404)
T ss_dssp CHHHHTSCCCTTC-------C-------C----CSSCCEECCCCSCSS-----------------------------CCC
T ss_pred hhHhhhCCchHHHHHHHHHHh-------c----CCCCEEecCCcCCCC-----------------------------CCC
Confidence 566666665554444332221 1 225789999999865 346
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
+.+.+++.+.+... ....|++..|..++|+++++++.+++|.++++ ++|++|+|+++++..++++++ ++||+|++
T Consensus 63 ~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~Vl~ 138 (404)
T 2o1b_A 63 QGIIDHFQKALTIP---ENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVI-NPGDYVLL 138 (404)
T ss_dssp HHHHHHHHHHTTCH---HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhc-CCCCEEEE
Confidence 77888887776431 14579888899999999999999888988787 799999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+.|+|..+...++..|++++.+++++ ++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|+
T Consensus 139 ~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 211 (404)
T 2o1b_A 139 PDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIID------KTKLIYLTYPNNPTGSTATKEVFDEAIAKFK 211 (404)
T ss_dssp EESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHT
T ss_pred cCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhcc------CceEEEEcCCCCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999876 5678999999999976 6899999999999999999999999999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|++||+||+|.++.+++. +.++...... .+ +++++.||||.| |++|+|+||+++ ++++++.+....
T Consensus 212 ~~~~~li~De~~~~~~~~g~--~~~~~~~~~~-----~~-~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~ 279 (404)
T 2o1b_A 212 GTDTKIVHDFAYGAFGFDAK--NPSILASENG-----KD-VAIEIYSLSKGY-NMSGFRVGFAVG---NKDMIQALKKYQ 279 (404)
T ss_dssp TSSCEEEEECTTTTCBSSSC--CCCGGGSTTH-----HH-HEEEEEESTTTT-TCGGGCCEEEEE---CHHHHHHHHHHH
T ss_pred HcCCEEEEEccchhcccCCC--CCChhhcCCC-----CC-CEEEEEecchhc-cCchhheEeEec---CHHHHHHHHHHH
Confidence 99999999999999888653 3333322100 11 479999999999 789999999987 899999998766
Q ss_pred h-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+++.+.|.++..+++. .+++++.++.++++++.+.+.|++.
T Consensus 280 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 280 THTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 4568899999998888876 3446677788888889998888775
No 29
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-37 Score=307.40 Aligned_cols=277 Identities=23% Similarity=0.328 Sum_probs=234.0
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|.|.. ..|+.+.+++.+.+... ...|++..|..++|+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~----~~~y~~~~g~~~l~~~l 76 (386)
T 1u08_A 30 HQAINLSQGFPDF-----------------------------DGPRYLQERLAHHVAQG----ANQYAPMTGVQALREAI 76 (386)
T ss_dssp TTCEECCCSSCSS-----------------------------CCCHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHH
T ss_pred CCeEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHhh----ccCCCCCCCCHHHHHHH
Confidence 3689999998864 34778888888888652 45799888999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
++++.+.+|.+++++ +|++|+|+++++..+++.++ ++||+|+++.|+|+.+...++..|++++.++++.+ +|.+|++
T Consensus 77 a~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~ 154 (386)
T 1u08_A 77 AQKTERLYGYQPDADSDITVTAGATEALYAAITALV-RNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQ 154 (386)
T ss_dssp HHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHH
T ss_pred HHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC-CCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHH
Confidence 999998889888898 99999999999999999998 79999999999999999999999999999998764 5789999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++ ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++.. +.++..+....
T Consensus 155 ~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~-- 225 (386)
T 1u08_A 155 EFAALLSE------RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQG-HASVLAHPQLR-- 225 (386)
T ss_dssp HHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSC-CCCGGGSHHHH--
T ss_pred HHHHhhcc------cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCC-CcChhcccCcc--
Confidence 99998865 7999999999999999999999999999999999999999999999886542 33443321111
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-PKVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~ 413 (434)
+ .++++.|+||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++. .+++++.++.+++
T Consensus 226 --~--~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 297 (386)
T 1u08_A 226 --E--RAVAVSSFGKTY-HMTGWKVGYCVA---PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQ 297 (386)
T ss_dssp --T--TEEEEEEHHHHT-TCGGGCCEEEEC---CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHH
T ss_pred --C--cEEEEecchhhc-CCcccceEEEEc---CHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 1 369999999999 789999999987 8999999887664 4557788889888888875 3446677888888
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 298 ~~~~l~~~L~~~ 309 (386)
T 1u08_A 298 KRDILVNALNES 309 (386)
T ss_dssp HHHHHHHHTTSS
T ss_pred HHHHHHHHHHHC
Confidence 888888887653
No 30
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=4.4e-37 Score=310.74 Aligned_cols=281 Identities=17% Similarity=0.211 Sum_probs=238.2
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|.+.. ..|+.+++++.+.+..... ....|++..|..++++++
T Consensus 37 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~l~~~l 86 (429)
T 1yiz_A 37 YKPLNLGQGFPDY-----------------------------HAPKYALNALAAAANSPDP-LANQYTRGFGHPRLVQAL 86 (429)
T ss_dssp HCCEECCSSSCSS-----------------------------CCCHHHHHHHHHHHTCSCG-GGGSCCCSSCCHHHHHHH
T ss_pred CCEEEecCCCCCC-----------------------------CCCHHHHHHHHHHHhcccc-CccCCCCCCCcHHHHHHH
Confidence 4689999998865 3477889988888865321 256799888999999999
Q ss_pred HHHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC-------
Q 013892 177 AAGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT------- 248 (434)
Q Consensus 177 a~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~------- 248 (434)
++++.+++|.+++++ +|++|+|+++++..+++.++ ++||+|+++.|+|+.+...++..|++++.++++.++
T Consensus 87 a~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 165 (429)
T 1yiz_A 87 SKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHV-DEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISS 165 (429)
T ss_dssp HHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEG
T ss_pred HHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhc-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccc
Confidence 999998888888898 99999999999999999998 799999999999999999999999999999987653
Q ss_pred -CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 249 -GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 249 -~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
+|.+|++.|++++++ ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++.. +.++.
T Consensus 166 ~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~ 238 (429)
T 1yiz_A 166 ADWVLDNNELEALFNE------KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFE-HIRIC 238 (429)
T ss_dssp GGCBCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSC-CCCGG
T ss_pred cCcccCHHHHHHHhcc------CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCC-CcChh
Confidence 678999999998865 7999999999999999999999999999999999999999999999886542 34443
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC------
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP------ 400 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~------ 400 (434)
.+ .. ..+ .++++.|+||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++.
T Consensus 239 ~~----~~-~~~-~~~~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 308 (429)
T 1yiz_A 239 TL----PG-MWE-RTITIGSAGKTF-SLTGWKIGWAYG---PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLK 308 (429)
T ss_dssp GS----TT-TGG-GEEEEEEHHHHH-TCGGGCCEEEES---CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTT
T ss_pred hc----cC-CcC-ceEEEecchhcc-CCCCcceEEEEe---CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhccccccc
Confidence 22 10 012 479999999999 789999999987 8899999887654 4567889999888888876
Q ss_pred --CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 --PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 --~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++++.++.++++++.+.+.|++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 309 SPECYFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4456778889999999999999875
No 31
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.1e-37 Score=308.10 Aligned_cols=277 Identities=22% Similarity=0.290 Sum_probs=233.0
Q ss_pred cceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHH
Q 013892 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (434)
Q Consensus 98 ~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (434)
++|+++.|.|.. ..|+.+.+++.+.+.+. ...|++..|..++|++++
T Consensus 26 ~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~----~~~y~~~~g~~~l~~~la 72 (411)
T 2o0r_A 26 GAVNLGQGFPDE-----------------------------DGPPKMLQAAQDAIAGG----VNQYPPGPGSAPLRRAIA 72 (411)
T ss_dssp TCEESSCSSCSS-----------------------------CCCHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHHH
T ss_pred CeeeccCcCCCC-----------------------------CCCHHHHHHHHHHHhcC----CCCCCCCCCCHHHHHHHH
Confidence 589999998864 34778889988888752 457999899999999999
Q ss_pred HHHHhhcCCCCCCC-CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCC-CCCCCCHH
Q 013892 178 AGIEARDGFPADPN-DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETS 255 (434)
Q Consensus 178 ~~~~~~~g~~~~~~-~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~ 255 (434)
+++.+.+|.+++++ +|++|+|+++++..+++.++ ++||+|+++.|+|+.+...++..|++++.++++.+ ++|.+|++
T Consensus 73 ~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~-~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 151 (411)
T 2o0r_A 73 AQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLV-EPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDAD 151 (411)
T ss_dssp HHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHH
T ss_pred HHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhc-CCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHH
Confidence 99999889888888 99999999999999999998 79999999999999999999999999999998754 35779999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++ ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++..+ ..
T Consensus 152 ~l~~~l~~------~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~----~~ 220 (411)
T 2o0r_A 152 ALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHAR-HLPLAGF----DG 220 (411)
T ss_dssp HHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC-CCCGGGS----TT
T ss_pred HHHHhhcc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-CcChhhc----cC
Confidence 99999875 7999999999999999999999999999999999999999999998886542 3343322 10
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC-CCCChHHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP-PKVGDESYESYCA 413 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~ 413 (434)
....++++.|+||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++. .+++++.++.+++
T Consensus 221 --~~~~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 294 (411)
T 2o0r_A 221 --MAERTITISSAAKMF-NCTGWKIGWACG---PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRA 294 (411)
T ss_dssp --TGGGEEEEEEHHHHT-TCTTTCEEEEEC---CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred --CCCCEEEEeechhhc-CCccceEEEEee---CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 011479999999999 789999999987 8999998877654 4456777888888878764 2345677888888
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 295 ~~~~l~~~L~~~ 306 (411)
T 2o0r_A 295 RRDRLAAGLTEI 306 (411)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 899998888875
No 32
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=3.5e-37 Score=309.69 Aligned_cols=309 Identities=19% Similarity=0.172 Sum_probs=224.1
Q ss_pred ChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCC-cccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 62 NPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNP-QSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p-~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
..++...+.. .+...+++++++ +.+++|++++|+| +. ..
T Consensus 17 ~~~~~~~~~~---~i~~~~~~~~~~--------~~~~~i~l~~g~~~d~-~~---------------------------- 56 (409)
T 4eu1_A 17 QGPGSMGKPD---PILGLGQDFRMD--------PAKRKVNLSIGVYRDD-AD---------------------------- 56 (409)
T ss_dssp -------------CHHHHHHHHHHC--------CCSSCEECCCSSCCCT-TS----------------------------
T ss_pred hhcCCCCCCC---hHHHHHHHHhhC--------CCcCceeeeeeEEECC-CC----------------------------
Confidence 3445555444 345556655554 2258999999998 54 21
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEE--EcCChHHHHHHHHH---HHhcCCC
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF--LTDGASPAVHMMMQ---LLIRSEN 215 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~--~t~G~~~al~~~l~---~l~~~~g 215 (434)
|+.+.+++.++ . . .....|.+..|.++||+++++++.+..+.++++++|. .|.|+++++..+.. .++ ++|
T Consensus 57 ~~~v~~a~~~a--~-~-~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~-~~g 131 (409)
T 4eu1_A 57 QPFVLECVKQA--T-L-GTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFV-ANC 131 (409)
T ss_dssp CCCCCHHHHTC--C-C-CSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTS-SSC
T ss_pred CEeecHHHHhc--C-c-cccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhc-CCC
Confidence 22234444433 1 1 1467899999999999999999854333223377884 58999999887644 344 689
Q ss_pred CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
|+|+++.|+|..|...++..|++++.++++++++|++|+++|++++++. ..+.+++++++||||||.+++.+++++|
T Consensus 132 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~p~NPtG~~~~~~~l~~i 208 (409)
T 4eu1_A 132 NRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKA---PEGSVILVHACAHNPTGVDPTHDDWRQV 208 (409)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999865567899999999999742 1145666778999999999999999999
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH---
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE--- 371 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~--- 371 (434)
+++|+++|+++|+||+|+++.+++.. ...++.... + ..+ ++|+++||||.| |++|+|+||++++..+++
T Consensus 209 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~---~-~~~--~~i~~~S~SK~~-g~~G~riG~~~~v~~~~~~~~ 281 (409)
T 4eu1_A 209 CDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV---D-MVP--NLIVAQSFSKNF-GLYGHRCGALHISTASAEEAK 281 (409)
T ss_dssp HHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH---T-TSS--CCEEEEECTTTS-SCGGGCCEEEEEECSSHHHHH
T ss_pred HHHHHhCCcEEEEeccccccccCCcccchHHHHHHH---h-hCC--cEEEEecCcccc-cCccCCceEEEEEeCCHHHHH
Confidence 99999999999999999998887521 012222221 1 123 479999999999 899999999722223777
Q ss_pred -HHHHHHHHhh-cccCCchHHHHHHHHHcCCC-------CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 372 -VREQIYKVAS-VNLCSNISGQILASLVMSPP-------KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 372 -~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++.+.+... .+.+++.++|.++..++++. ++.++.++.++++|+.+.+.|++.
T Consensus 282 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 282 RLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6666666554 56788899999999888763 235667788888999998888875
No 33
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.2e-36 Score=307.64 Aligned_cols=248 Identities=21% Similarity=0.277 Sum_probs=208.9
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCC-------CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPAD-------PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA 233 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~ 233 (434)
.+|++..|++++|+++++++.+.+|...+ +++|++|+|+++++.+++++++ ++||+|+++.|+|+.+...++
T Consensus 72 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~ 150 (425)
T 2r2n_A 72 LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII-NPGDNVLLDEPAYSGTLQSLH 150 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHG
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC-CCCCEEEEeCCCcHHHHHHHH
Confidence 46999999999999999999998897764 3799999999999999999998 799999999999999999999
Q ss_pred HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH------hcCCCeeEEEE-ecCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 013892 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAK------AKGITVRALVV-INPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (434)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~g~~~~~i~l-~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 306 (434)
..|++++.++++++ ++|+++|+++++... ..+.++++|++ ++||||||.+++.+++++|+++|+++|++|
T Consensus 151 ~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~l 227 (425)
T 2r2n_A 151 PLGCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227 (425)
T ss_dssp GGTCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HcCCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 99999999998754 689999999886311 00125788877 499999999999999999999999999999
Q ss_pred EEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccC
Q 013892 307 LADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLC 385 (434)
Q Consensus 307 i~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~ 385 (434)
|+||+|.++.|++.. +.++..+ + .+.++|+++||||.| | +|+|+||+++ ++++++.+..... ...+
T Consensus 228 i~De~~~~~~~~g~~-~~~~~~~----~---~~~~~i~~~s~SK~~-~-~GlRiG~~~~---~~~l~~~l~~~~~~~~~~ 294 (425)
T 2r2n_A 228 IEDDPYYFLQFNKFR-VPTFLSM----D---VDGRVIRADSFSKII-S-SGLRIGFLTG---PKPLIERVILHIQVSTLH 294 (425)
T ss_dssp EEECTTGGGBSSSSC-CCCTGGG----C---TTSCEEEEEESTTTT-C-STTCCEEEEE---EHHHHHHHHHHHHTTTCS
T ss_pred EEECCcccccCCCCC-CCCcccc----C---CCCCEEEEccchhhc-c-CccceEEEec---CHHHHHHHHHHHHHhcCC
Confidence 999999999887642 4444332 2 112589999999999 7 9999999988 8899999988765 5568
Q ss_pred CchHHHHHHHHHcCC------CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 386 SNISGQILASLVMSP------PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 386 ~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+.|.++..+++. .+++++.++.|+++|+.+.+.|+++
T Consensus 295 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (425)
T 2r2n_A 295 PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKW 340 (425)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999888875 1345677788888999998888775
No 34
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=9.8e-37 Score=308.61 Aligned_cols=281 Identities=16% Similarity=0.168 Sum_probs=235.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|.. ..|+.+++++.+.+... ....|++..|..++|+++
T Consensus 44 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~l 91 (437)
T 3g0t_A 44 TKFCRMEMGVPGL-----------------------------PAPQIGIETEIQKLREG---VASIYPNLDGLPELKQEA 91 (437)
T ss_dssp CCCEECCCCSCCS-----------------------------CCCHHHHHHHHHHHHHT---GGGSCCCTTCCHHHHHHH
T ss_pred CCEEeccCcCCCC-----------------------------CCCHHHHHHHHHHHhCC---cCcCCCCCCChHHHHHHH
Confidence 5799999999875 45788999998888752 137899999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-CCCC--EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCC
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-SEND--GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE 253 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-~~gd--~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (434)
++++.+++|+++++++|++|+|+++++..+++.++. ++|| +|+++.|+|..+...++..|++++.++++ +++|.+|
T Consensus 92 a~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d 170 (437)
T 3g0t_A 92 SRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKL 170 (437)
T ss_dssp HHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHH
T ss_pred HHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccC
Confidence 999999999999999999999999999999999861 3899 99999999999999999999999999997 4567899
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCc---cch-HHH
Q 013892 254 TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF---HSF-KKV 329 (434)
Q Consensus 254 ~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~---~s~-~~~ 329 (434)
+++|+++++.. ++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+. .++ ..+
T Consensus 171 ~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
T 3g0t_A 171 REKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSV 245 (437)
T ss_dssp HHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCG
T ss_pred HHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhcc
Confidence 99999999321 799999999999999999999999999999999999999999999888743222 000 111
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH-H-----------------HHHHhh-cccCCchHH
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE-Q-----------------IYKVAS-VNLCSNISG 390 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~-~-----------------l~~~~~-~~~~~~~~~ 390 (434)
.. . .+ ++++++||||.| |++|+|+||+++ ++++++ . +..... ...+++.++
T Consensus 246 -~~---~-~~-~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (437)
T 3g0t_A 246 -AN---Y-TD-NYILALSSSKAF-SYAGQRIGVLMI---SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSA 315 (437)
T ss_dssp -GG---T-CS-CEEEEEESTTTT-SCGGGCCEEEEE---CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHH
T ss_pred -CC---C-CC-cEEEEEcCccCC-CCccceeEEEEE---CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHH
Confidence 11 1 12 479999999999 889999999988 888888 7 665544 456889999
Q ss_pred HHHHHHHcCCCCC----ChHHHHHHHHHHHHHHHHHHHH
Q 013892 391 QILASLVMSPPKV----GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 391 q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|.++..+++..+. +++.+++++++++.+.+.|+++
T Consensus 316 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 316 QWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp HHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999888876432 6788889999999999988765
No 35
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=5.8e-36 Score=296.48 Aligned_cols=292 Identities=22% Similarity=0.336 Sum_probs=240.7
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
+++++...+.+....+...+.+.++. | +++|+++.|.|.. ..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~~~~~~-----------------------------~~ 43 (370)
T 2z61_A 2 LSKRLLNFESFEVMDILALAQKLESE---G------KKVIHLEIGEPDF-----------------------------NT 43 (370)
T ss_dssp CCHHHHHCCCCTTHHHHHHHHHHHHT---T------CCCEECCCCSCSS-----------------------------CC
T ss_pred hhhhhhhccccHHHHHHHHHHHHHhc---C------CCEEEccCCCCCC-----------------------------CC
Confidence 45666666666655666666665433 1 5789999999864 34
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
|+.+.+++.+.+... ...|++..|..++|+++++++.+++|+++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 44 ~~~v~~a~~~~~~~~----~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~ 118 (370)
T 2z61_A 44 PKPIVDEGIKSLKEG----KTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSII-DDGDEVLI 118 (370)
T ss_dssp CHHHHHHHHHHHHTT----CCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEE
T ss_pred CHHHHHHHHHHHHcC----ccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhc-CCCCEEEE
Confidence 778889888888752 4579988899999999999999988988999999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
+.|+|+.+...++..|++++.++ +|+++|++++++ ++++|++++|+||||.+++.+ |+++|+
T Consensus 119 ~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~----l~~~~~ 180 (370)
T 2z61_A 119 QNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALSD------KTKAIIINSPSNPLGEVIDRE----IYEFAY 180 (370)
T ss_dssp ESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCCS------SEEEEEEESSCTTTCCCCCHH----HHHHHH
T ss_pred eCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhccc------CceEEEEcCCCCCcCcccCHH----HHHHHH
Confidence 99999999999999999999887 589999988865 789999999999999999965 999999
Q ss_pred HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 301 KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 301 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
++|+++|+||+|.++.+++. +.++..+ ... .+ +++++.||||.| |++|+|+||+++ ++++++.+....
T Consensus 181 ~~~~~li~De~~~~~~~~g~--~~~~~~~----~~~-~~-~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~ 248 (370)
T 2z61_A 181 ENIPYIISDEIYNGLVYEGK--CYSAIEF----DEN-LE-KTILINGFSKLY-AMTGWRIGYVIS---NDEIIEAILKLQ 248 (370)
T ss_dssp HHCSEEEEECTTTTCBSSSC--CCCGGGT----CTT-CS-SEEEEEESTTTT-TCGGGCCEEEEC---CHHHHHHHHHHH
T ss_pred HcCCEEEEEcchhhcccCCC--CcCHHHc----cCC-CC-cEEEEecChhcc-CCccceEEEEEE---CHHHHHHHHHHH
Confidence 99999999999999888653 3343322 111 12 479999999999 889999999987 889999998776
Q ss_pred h-cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 381 S-VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 381 ~-~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. ...+++.+.|.++..+++. .+++++.++.++++++.+.+.|++.
T Consensus 249 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 249 QNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp HHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5 4458899999999888874 3445677888888999998888764
No 36
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=2.3e-35 Score=295.84 Aligned_cols=310 Identities=21% Similarity=0.313 Sum_probs=245.5
Q ss_pred cChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCC
Q 013892 61 LNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLF 140 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~ 140 (434)
+++++..+..+....+...+.+++ . |..++|+++.|.|+..+ ..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~-~--------~g~~~idl~~g~~~~~~---------------------------~~ 50 (407)
T 2zc0_A 7 LAGRANWIKGSALADVMKKASELQ-K--------KGVKLISLAAGDPDPEL---------------------------IP 50 (407)
T ss_dssp SCGGGGGCCCCHHHHHHHHHHHHH-H--------SSCCCEECCSCCCCTTT---------------------------SC
T ss_pred hhhhhccCCchHHHHHHHhhhccc-C--------CCCceEeCCCCCCCchh---------------------------CC
Confidence 345555555444444545444432 1 11478999999987521 23
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILC 220 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv 220 (434)
++.+.+++.+.+..... ... |++..|..++|+++++++.+++|.++++++|++|+|+++++..+++.++ ++||+|++
T Consensus 51 ~~~v~~a~~~~~~~~~~-~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~-~~gd~vl~ 127 (407)
T 2zc0_A 51 RAVLGEIAKEVLEKEPK-SVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLI-DPGDVVIT 127 (407)
T ss_dssp HHHHHHHHHHHHHHCGG-GGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHHHhhccc-ccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhc-CCCCEEEE
Confidence 45677778888776421 245 9988899999999999998888888889999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EecCCCCCccCCCHHHHHHHHHHH
Q 013892 221 PIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 221 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
+.|+|..+...++..|++++.++++++ ++|+++|+++++....++.++++|+ +++|+||||.+++.+++++|+++|
T Consensus 128 ~~p~~~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~ 204 (407)
T 2zc0_A 128 ENPSYINTLLAFEQLGAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIA 204 (407)
T ss_dssp EESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHH
T ss_pred eCCChHHHHHHHHHcCCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHH
Confidence 999999999999999999999998754 5899999999974332333688875 569999999999999999999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
+++|+++|+||+|.++.+++.. +.++..+ + ..+ ++++++||||.| | +|+|+||+++ ++++++.+...
T Consensus 205 ~~~~~~li~De~~~~~~~~~~~-~~~~~~~----~-~~~--~~i~~~s~sK~~-~-~G~r~G~~~~---~~~~~~~~~~~ 271 (407)
T 2zc0_A 205 SKYDLLIIEDTAYNFMRYEGGD-IVPLKAL----D-NEG--RVIVAGTLSKVL-G-TGFRIGWIIA---EGEILKKVLMQ 271 (407)
T ss_dssp HHHTCEEEEECTTTTSBSSCSS-CCCGGGG----C-SSC--CEEEEEESTTTT-C-TTSCCEEEEC---CHHHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCCCC-CCChhhc----C-CCC--CEEEEccccccc-C-CCcceEEEec---CHHHHHHHHHH
Confidence 9999999999999998886542 3333322 2 112 479999999999 7 9999999987 89999998876
Q ss_pred hh-cccCCchHHHHHHHHHcCCC----CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 380 AS-VNLCSNISGQILASLVMSPP----KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 380 ~~-~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.. ...+++.+.|.++..+++.. +++++.++.++++++.+.+.|++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (407)
T 2zc0_A 272 KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH 322 (407)
T ss_dssp HTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 44567899999999888875 567788899999999999999875
No 37
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-36 Score=304.11 Aligned_cols=303 Identities=26% Similarity=0.381 Sum_probs=248.1
Q ss_pred cccccChhhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCccccccc
Q 013892 57 TVDSLNPKVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSET 136 (434)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~ 136 (434)
.++-.|+++...+.+....+...+.+++++ | +++|+++.|+|..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g------~~~i~l~~~~~~~--------------------------- 55 (409)
T 2gb3_A 12 HMDVFSDRVLLTEESPIRKLVPFAEMAKKR---G------VRIHHLNIGQPDL--------------------------- 55 (409)
T ss_dssp ----CCHHHHSCCCCTTGGGHHHHHHHHHT---T------CEEEECSSCCCCS---------------------------
T ss_pred hHHHHHHHhhcCCccHHHHHHHHHHHHHhc---C------CCEEeccCCCCCC---------------------------
Confidence 466678888888877776778877777654 2 4799999999864
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
..|+.+++++ +.+.. ....|++..|..++++++++++.+.+|+++++++|++|+|+++++..+++.++ ++||
T Consensus 56 --~~~~~v~~a~-~~l~~----~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd 127 (409)
T 2gb3_A 56 --KTPEVFFERI-YENKP----EVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIA-NPGD 127 (409)
T ss_dssp --CCCTHHHHHH-HHTCC----SSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTC
T ss_pred --CCCHHHHHHH-HHHhc----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhC-CCCC
Confidence 2366688888 77653 24579988899999999999999988988889999999999999999999998 7999
Q ss_pred EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+|+++.|+|+.+...++..|++++.++++++++|.+ +++|++++++ ++++|++++|+||||.+++.+++++|+
T Consensus 128 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~ 200 (409)
T 2gb3_A 128 EILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE------RTKGIVLSNPCNPTGVVYGKDEMRYLV 200 (409)
T ss_dssp EEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT------TEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc------CCeEEEECCCCCCCCCCcCHHHHHHHH
Confidence 999999999999999999999999999876455666 8888888765 789999999999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-HHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQ 375 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~ 375 (434)
++|+++|+++|+||+|.++.+++. +.++ ...+. + .++++.||||.| |++|+|+||+++ ++ ++++.
T Consensus 201 ~~~~~~~~~li~Dea~~~~~~~~~--~~~~---~~~~~---~--~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~l~~~ 266 (409)
T 2gb3_A 201 EIAERHGLFLIVDEVYSEIVFRGE--FASA---LSIES---D--KVVVIDSVSKKF-SACGARVGCLIT---RNEELISH 266 (409)
T ss_dssp HHHHHTTCEEEEECTTTTCBCSSC--CCCG---GGSCC---T--TEEEEEESTTTT-TCGGGCCEEEEC---SCHHHHHH
T ss_pred HHHHHcCCEEEEECcccccccCCC--CCCc---cccCC---C--CEEEEecchhcc-CCccceEEEEEE---CcHHHHHH
Confidence 999999999999999999887653 3332 12111 2 368999999999 889999999976 55 89998
Q ss_pred HHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+..... .. +++.+.|.++..+++.. +++++.++.++++++.+.+.|++.
T Consensus 267 l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 267 AMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp HHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 877655 34 78899999998888653 345667788888888888888764
No 38
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.9e-36 Score=302.03 Aligned_cols=267 Identities=21% Similarity=0.285 Sum_probs=226.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
..|+.+++++.+.+.... ...|++..|..++++++++++.+.+|.++++ ++|++|+|+++++..++..++ ++||+
T Consensus 53 ~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~ 128 (407)
T 3nra_A 53 EPTPGAFDLFSAGVQSGG---VQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATV-ARGDK 128 (407)
T ss_dssp CCCTTHHHHHHHHHHHTH---HHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTC-CTTCE
T ss_pred CCcHHHHHHHHHHHhcCC---CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhC-CCCCE
Confidence 457779999988887532 4469888999999999999999999988777 799999999999999999988 79999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCC----CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDE----ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~ 293 (434)
|+++.|+|..+...++..|++++.++++. ++++.+|+++|++++++ ++++|++++|+||||.+++.++++
T Consensus 129 vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~ 202 (407)
T 3nra_A 129 VAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA------GARVFLFSNPNNPAGVVYSAEEIG 202 (407)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT------TCCEEEEESSCTTTCCCCCHHHHH
T ss_pred EEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh------CCcEEEEcCCCCCCCcccCHHHHH
Confidence 99999999999999999999999999842 35679999999999987 789999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH
Q 013892 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 294 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 373 (434)
+|+++|++||+++|+||+|.++.+++.. +.++..... .. .+ +++++.||||.| |++|+|+||+++ +++++
T Consensus 203 ~i~~~~~~~~~~li~Dea~~~~~~~g~~-~~~~~~~~~---~~-~~-~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~ 272 (407)
T 3nra_A 203 QIAALAARYGATVIADQLYSRLRYAGAS-YTHLRAEAA---VD-AE-NVVTIMGPSKTE-SLSGYRLGVAFG---SRAII 272 (407)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBCTTCC-CCCGGGCTT---SC-GG-GEEEEECSSSTT-CCGGGCCEEEEE---CHHHH
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCC-CCChhhcCc---cc-CC-cEEEEeCccccc-CCCeeeEEEEEc---CHHHH
Confidence 9999999999999999999999887642 334332210 11 12 479999999999 889999999987 89999
Q ss_pred HHHHHHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 374 EQIYKVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 374 ~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+..... ...+++.+.|.++..+++.. +++++.+++++++++.+.+.|+++
T Consensus 273 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (407)
T 3nra_A 273 ARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGC 326 (407)
T ss_dssp HHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99987765 55677888999888888753 446777888888888888888754
No 39
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=2.4e-36 Score=305.72 Aligned_cols=306 Identities=19% Similarity=0.245 Sum_probs=241.7
Q ss_pred cccccChhhhccccc-ccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccc
Q 013892 57 TVDSLNPKVLKCEYA-VRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSE 135 (434)
Q Consensus 57 ~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~ 135 (434)
+...+|+++.+++.. .+..+..+......+ . +.+++|++++|+|++
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~----~~~~~i~l~~~~~~~-------------------------- 68 (432)
T 3ei9_A 22 TKVSRNSNMSKLQAGYLFPEIARRRSAHLLK---Y----PDAQVISLGIGDTTE-------------------------- 68 (432)
T ss_dssp CSCCCCHHHHHCCSSCHHHHHHHHHHHHHHH---C----TTCCCEECSSCCCCS--------------------------
T ss_pred eccccChHHHhCCCCccHHHHHHHHHhhhhc---C----CCCCeEEccCCCCCC--------------------------
Confidence 345677888887763 555555665554443 1 235899999999986
Q ss_pred cCCCCCHHHHHHHHHHHHcCCC-CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC
Q 013892 136 TQGLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (434)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~ 214 (434)
..|+.+++++.+.+..... .....|++..|..+|++++++|+.+ ++++++++|++|+|+++++..+ ..++ ++
T Consensus 69 ---~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~-~~ 141 (432)
T 3ei9_A 69 ---PIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMF-GS 141 (432)
T ss_dssp ---CCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHH-CT
T ss_pred ---CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHc-CC
Confidence 4588899999988875432 1356899889999999999999974 6667889999999999999975 5666 79
Q ss_pred CCEEEEcCCCChhHHHHHHHcCC------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 215 NDGILCPIPQYPLYSASIALHGG------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 215 gd~Vlv~~p~y~~~~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
||.|+++.|+|++|...++..|. +++.++++.++++..|++. . .++++|++++||||
T Consensus 142 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~------~~~~~v~l~~p~NP 210 (432)
T 3ei9_A 142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----V------GRTDIIFFCSPNNP 210 (432)
T ss_dssp TCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----C------CCCSEEEEESSCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----C------CCCCEEEEeCCCCC
Confidence 99999999999999999998884 6888888766666666543 1 27899999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.+++.+++++|+++|+++|++||+||+|.++++++. ..++... . ...+ ++|+++||||.| |++|+|+||
T Consensus 211 tG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~--~~~~~~~----~-~~~~-~~i~~~S~SK~~-g~~G~r~G~ 281 (432)
T 3ei9_A 211 TGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN--PRSIFEI----P-GAEE-VAMETASFSNYA-GFTGVRLGW 281 (432)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC--CSSGGGS----T-TGGG-TEEEEEESHHHH-CTTTTCCEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC--CCChhhc----C-CCCC-eEEEEecchhcc-CCcccceEE
Confidence 99999999999999999999999999999999888754 3333322 1 1122 479999999999 899999999
Q ss_pred EEEecCCHHH--------HHHHHHHhh-cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEV--------REQIYKVAS-VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~--------~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++ ++++ ++.+.+... .+.+++.++|.++..++.+. +++++.++.++++++.+.+.|++.
T Consensus 282 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 282 TVI---PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp EEC---CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEE---ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 987 6666 777776655 56678999999988888642 346677888899999999888775
No 40
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=3.5e-36 Score=298.36 Aligned_cols=259 Identities=16% Similarity=0.202 Sum_probs=222.1
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+++++.+.+... ...|++ .| .++|+++++++.+++|.++++++|++|+|+++++..+++.++ ++||+|
T Consensus 36 ~~~~~v~~a~~~~~~~~----~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~-~~gd~v 108 (377)
T 3fdb_A 36 STCPAVLQAITDAVQRE----AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFT-PAQSKV 108 (377)
T ss_dssp CCCHHHHHHHHHHHHTT----CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCCE
T ss_pred CCCHHHHHHHHHHHHcC----CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhc-CCCCEE
Confidence 46888999998888762 567988 77 899999999999999988999999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..+...++..|++++.++++.+ +|+++|++++++ +++++++++|+||||.+++.+++++|+++
T Consensus 109 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 178 (377)
T 3fdb_A 109 IVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQA------GARSILLCNPYNPLGMVFAPEWLNELCDL 178 (377)
T ss_dssp EEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHT------TCCEEEEESSBTTTTBCCCHHHHHHHHHH
T ss_pred EEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhcc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999998764 899999999987 68899999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCC-CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVP-EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~-~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
|+++|+++|+||+|.++.+++ .. +.++..+.. ..++++++||||.| |++|+|+||+++ .++++++.+.
T Consensus 179 ~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~-------~~~~i~~~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~ 247 (377)
T 3fdb_A 179 AHRYDARVLVDEIHAPLVFDGQHT-VAAGVSDTA-------ASVCITITAPSKAW-NIAGLKCAQIIF--SNPSDAEHWQ 247 (377)
T ss_dssp HHHTTCEEEEECTTGGGBSSSCCC-CGGGSCHHH-------HHHEEEEECSTTTT-TCGGGCCEEEEC--CSHHHHHHHH
T ss_pred HHHcCCEEEEEcccchhhcCCCCC-cccHHHccC-------CCcEEEEEeChHhc-cCcchhheEEEe--CCHHHHHHHH
Confidence 999999999999999988876 32 333322211 11479999999999 889999999864 4788999988
Q ss_pred HHhh-cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVAS-VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... ...+++.++|.++..+++.. +++++.++.++++++.+.+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (377)
T 3fdb_A 248 QLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKR 297 (377)
T ss_dssp HSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7655 45688999999988888753 445677888888888888888774
No 41
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=3.8e-36 Score=302.15 Aligned_cols=293 Identities=16% Similarity=0.108 Sum_probs=228.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|.|...... ..+++.+.+++.+.+.+.. ....|.+..|..++|+++
T Consensus 30 ~~~i~l~~g~~~~~~~~------------------------~~~~~~v~~a~~~~~~~~~--~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQ------------------------PWVLPVVRKVEQRIANNSS--LNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp TTCEECCSCCCCCTTSC------------------------CCCCHHHHHHHHHHHTCTT--CCCCCCCTTCCHHHHHHH
T ss_pred CCceeeccceecCCCCC------------------------ccccHHHHHHHHHhhhChh--hccCCCCCCCCHHHHHHH
Confidence 57999999997321110 1246778888877763321 266898999999999999
Q ss_pred HHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHH--HHhcCCC-----CEEEEcCCCChhHHHHHHHcCCe-EEEEecCC
Q 013892 177 AAGIEARDGFPADPNDIFL--TDGASPAVHMMMQ--LLIRSEN-----DGILCPIPQYPLYSASIALHGGT-LVPYYLDE 246 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~--~l~~~~g-----d~Vlv~~p~y~~~~~~~~~~g~~-~~~~~~~~ 246 (434)
++++.+.+|..+++++|++ |+|+++++.++++ .++ .+| |+|+++.|+|+.|...++..|++ ++.+++++
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~-~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 162 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARW-YNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWD 162 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH-SSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEE
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHh-CcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeec
Confidence 9999776666667899999 9999999999964 345 689 99999999999999999999999 99999865
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC-CCccc
Q 013892 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE-KKFHS 325 (434)
Q Consensus 247 ~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~-~~~~s 325 (434)
+++|.+|+++|++++++. +.+++++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ..+.+
T Consensus 163 ~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 239 (412)
T 1ajs_A 163 TEKRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWA 239 (412)
T ss_dssp TTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred CCCCccCHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchH
Confidence 557899999999998752 22567888899999999999999999999999999999999999999877641 01233
Q ss_pred hHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH----HHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE----VREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 326 ~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~----~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
+..+.. . .+ ++|++.||||.| |++|+|+||+++...+++ +++.+.+... .+.+++.++|.++..+|++
T Consensus 240 ~~~~~~----~-~~-~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1ajs_A 240 IRYFVS----E-GF-ELFCAQSFSKNF-GLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSD 312 (412)
T ss_dssp HHHHHH----T-TC-CEEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHS
T ss_pred HHHHhc----c-CC-cEEEEEeccccc-CCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcC
Confidence 332221 1 12 479999999999 778999999975323565 5555555343 5556799999999988876
Q ss_pred CC-------CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PK-------VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 401 ~~-------~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+ ++++.+++++++++.+.+.|++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 313 PELFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 42 456778888999999999888753
No 42
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=8.7e-36 Score=295.90 Aligned_cols=265 Identities=15% Similarity=0.220 Sum_probs=223.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+.+++.+.+.+. ...|++. ..++++++++++.+.+|.++++++|++|+|+++++..++..++ ++||+|
T Consensus 37 ~~~~~v~~a~~~~~~~~----~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~v 109 (383)
T 3kax_A 37 EVPQPIQTALKKRIEHP----IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT-KENESV 109 (383)
T ss_dssp CCCHHHHHHHHHHHHSC----CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC-CTTCEE
T ss_pred CCCHHHHHHHHHHHhcC----CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC-CCCCEE
Confidence 46888999999888752 4567765 6789999999999999988899999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
+++.|+|..+...++..|++++.++++.++ +|.+|+++|++++++ ++++|++++|+||||.+++.+++++|++
T Consensus 110 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~ 183 (383)
T 3kax_A 110 LVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ------GVKLMLLCSPHNPIGRVWKKEELTKLGS 183 (383)
T ss_dssp EECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT------TCCEEEEESSBTTTTBCCCHHHHHHHHH
T ss_pred EEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc------CCeEEEEeCCCCCCCcCcCHHHHHHHHH
Confidence 999999999999999999999999987433 477999999999954 7999999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|+++|+++|+||+|.++.+++.. +.++.....++. + ++++++||||.| |++|+|+||+++ .++++++.+.
T Consensus 184 ~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~~---~--~~i~~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~~~ 254 (383)
T 3kax_A 184 LCTKYNVIVVADEIHSDIIYADHT-HTPFASLSEELA---A--RTITCMAPSKTF-NIAGLQASIIII--PNEKLRQAFT 254 (383)
T ss_dssp HHHHHTCEEEEECTTTTCBCTTCC-CCCGGGSCHHHH---T--TEEEEECSHHHH-TCGGGCCEEEEC--CCHHHHHHHH
T ss_pred HHHHCCCEEEEEccccccccCCCC-ceeHhhcCcccc---C--cEEEEEEChhhc-cCcchhheEEEe--CCHHHHHHHH
Confidence 999999999999999998887642 344433322111 2 479999999999 889999999975 3688999888
Q ss_pred HHhh--cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVAS--VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~--~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... ...+++.+++.++..+++.. +++++.+++++++++.+.+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 305 (383)
T 3kax_A 255 SIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDH 305 (383)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7654 33478999999998888763 335677788888888888888764
No 43
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.3e-36 Score=300.98 Aligned_cols=268 Identities=22% Similarity=0.269 Sum_probs=222.5
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCC-CCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFP-ADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~-~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.++.+.+++.+.+..... ....|++..|..++|+++++++.+++|.+ +++++|++|+|+++++..++++++ ++||+|
T Consensus 59 ~~~~v~~a~~~~~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~-~~gd~V 136 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYH-YTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFL-DDESYC 136 (425)
T ss_dssp CHHHHHHHHHHHHHHSHH-HHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHC-CTTCEE
T ss_pred CHHHHHHHHHHHHhhcch-hhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhC-CCCCEE
Confidence 356677777777765311 13579988899999999999998877877 788999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc--CCCeeEEE-EecCCCCCccCCCHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK--GITVRALV-VINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--g~~~~~i~-l~~p~NPtG~~~~~~~l~~i 295 (434)
+++.|+|..+...++..|++++.++++++ ++|+++|++++++..++ +.++++|+ +++|+||||.+++.+++++|
T Consensus 137 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l 213 (425)
T 1vp4_A 137 VLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKAL 213 (425)
T ss_dssp EEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHH
Confidence 99999999999999999999999998764 58999999999763221 12688885 67999999999999999999
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
+++|+++|+++|+||+|.++.+++.. +.++..+. ..+ ++|++.||||.| | +|+|+||+++ ++++++.
T Consensus 214 ~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~-----~~~--~~i~~~s~sK~~-~-~G~r~G~~~~---~~~~~~~ 280 (425)
T 1vp4_A 214 VEIAEKYDLFIVEDDPYGALRYEGET-VDPIFKIG-----GPE--RVVLLNTFSKVL-A-PGLRIGMVAG---SKEFIRK 280 (425)
T ss_dssp HHHHHHTTCEEEEECSSTTCBCSSCC-CCCHHHHH-----CTT--TEEEEEESTTTT-C-GGGCEEEEEC---CHHHHHH
T ss_pred HHHHHHcCCEEEEECCCccccCCCCC-CcCHHHhC-----CCC--CEEEEecccccc-c-cccceEEEee---CHHHHHH
Confidence 99999999999999999999886642 34554431 112 479999999999 7 9999999987 8999999
Q ss_pred HHHHhh-cccCCchHHHHHHHHHcCCC---CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVAS-VNLCSNISGQILASLVMSPP---KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~-~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+..... ...+++.++|.++..++++. +++++.++.++++++.+.+.|++.
T Consensus 281 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 334 (425)
T 1vp4_A 281 IVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEY 334 (425)
T ss_dssp HHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 887655 44577899999999888764 456778888999999999998875
No 44
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=8.9e-36 Score=296.64 Aligned_cols=266 Identities=19% Similarity=0.213 Sum_probs=222.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+++++.+.+.+. ...|++. ..++++++++++.+.+|.++++++|++|+|+++++..++..++ ++||+|
T Consensus 40 ~~~~~v~~a~~~~~~~~----~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~v 112 (391)
T 3dzz_A 40 KIAPEIMASMEEKLKVA----AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT-SPGDQI 112 (391)
T ss_dssp CCCHHHHHHHHHHHTTC----CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCEE
T ss_pred CCCHHHHHHHHHHHhcC----cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC-CCCCeE
Confidence 46888999998888652 5567765 6899999999999999988899999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
+++.|+|..+...++..|++++.++++ ++++|.+|+++|++++++. ++++|++++|+||||.+++.+++++|++
T Consensus 113 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~ 187 (391)
T 3dzz_A 113 LVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYAWSEEEVKRIAE 187 (391)
T ss_dssp EECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBCCCHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 999999999999999999999999986 4556779999999999732 7999999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|+++|+++|+||+|.++.+.+.. +.++... ....++ ++|++.|+||.+ |++|+|+||+++ .++++++.+.
T Consensus 188 ~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~----~~~~~d-~~i~~~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~ 258 (391)
T 3dzz_A 188 LCAKHQVLLISDEIHGDLVLTDED-ITPAFTV----DWDAKN-WVVSLISPSKTF-NLAALHAACAII--PNPDLRARAE 258 (391)
T ss_dssp HHHHTTCEEEEECTTTTCBCSSCC-CCCGGGS----CTTTGG-GEEEEECSHHHH-TCTTTCCEEEEC--CSHHHHHHHH
T ss_pred HHHHCCCEEEEecccccccCCCCC-ceehhhc----CccccC-cEEEEEeChhhc-cccchhheEEEE--CCHHHHHHHH
Confidence 999999999999999998887642 3444322 111233 589999999999 889999999976 2489999998
Q ss_pred HHhh--cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVAS--VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~--~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... ...+++.+++.++..++... +++++.+++++++++.+.+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 309 (391)
T 3dzz_A 259 ESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE 309 (391)
T ss_dssp HHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7653 44578888888887777643 335677778888888888888764
No 45
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=2.6e-35 Score=297.75 Aligned_cols=259 Identities=24% Similarity=0.383 Sum_probs=215.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCC--CCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFP--ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG 236 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~--~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g 236 (434)
...|++..|..++|+++++++.+.+|.. +++++|++|+|+++++..++++++ ++||+|+++.|+|..|...+. ..|
T Consensus 76 ~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~~g 154 (428)
T 1iay_A 76 IANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA-DPGDAFLVPSPYYPAFNRDLRWRTG 154 (428)
T ss_dssp HHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC-CTTCEEEEESSCCTTHHHHTTTTTC
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhC-CCCCeEEEccCCCcchHHHHHHhcC
Confidence 4579988899999999999999888866 778999999999999999999998 799999999999999987554 689
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
++++.++++.+++|.+|+++|++++++....+.++++|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.
T Consensus 155 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 234 (428)
T 1iay_A 155 VQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATV 234 (428)
T ss_dssp CEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGC
T ss_pred CEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccc
Confidence 99999999766678999999999998755555579999999999999999999999999999999999999999999988
Q ss_pred cCCCCCccchHHHHhhh--CCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSM--GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILA 394 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l--~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~ 394 (434)
|++. .+.++..+.... .....+ ++|++.||||.| |++|+|+||+++ .++++++.+.+.... .+++.++|.++
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~~~d-~viv~~s~sK~~-g~~Glr~G~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~a~ 308 (428)
T 1iay_A 235 FDTP-QFVSIAEILDEQEMTYCNKD-LVHIVYSLSKDM-GLPGFRVGIIYS--FNDDVVNCARKMSSF-GLVSTQTQYFL 308 (428)
T ss_dssp CSSS-CCCCHHHHHTSGGGTTSCTT-SEEEEEESTTTS-SCGGGCEEEEEE--SCHHHHHHHHHHHTT-SCCCHHHHHHH
T ss_pred cCCC-CccCHHHhccccccccCCCC-cEEEEecchhhc-CCCCceEEEEEe--CCHHHHHHHHHHHhc-ccCCHHHHHHH
Confidence 8653 244554443210 000023 479999999999 889999999976 367888888765543 46889999999
Q ss_pred HHHcCCCC----CChHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPK----VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 395 ~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..++++.+ ++++.++.++++++.+.+.|++.
T Consensus 309 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 309 AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998754 45567788888888888888765
No 46
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.4e-35 Score=298.11 Aligned_cols=294 Identities=15% Similarity=0.064 Sum_probs=226.5
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHH-HHHcCCCCCCCCCCCCcchHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQ-ILDQIPGRATGAYSHSQGIKGLRDT 175 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~-~l~~~~~~~~~~Y~~~~G~~~lr~~ 175 (434)
+++|++++|.|-..+.. ..+++.+.+++.+ .+.. . ....|++..|..++|++
T Consensus 29 ~~~i~l~~g~~~d~~~~------------------------~~~~~~v~~a~~~~~~~~-~--~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGK------------------------PWVLPSVKAAEKLIHNDS-S--YNHEYLGITGLPSLTSN 81 (412)
T ss_dssp SSCEECSSCCCBCTTSC------------------------BCCCHHHHHHHHHHHTCT-T--CCCCCCCTTCCHHHHHH
T ss_pred CCeEEEeeeeeeCCCCC------------------------CCCcHHHHHHHHhhhcCc-c--cccCCCCCCCcHHHHHH
Confidence 57899999998432111 1246778888877 6652 1 25679899999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHH--HHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCC
Q 013892 176 IAAGIEARDGFPADPNDIFL--TDGASPAVHMMM--QLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWG 251 (434)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l--~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 251 (434)
+++++.+.+|..+++++|++ |+|+++++.+++ ..++ .+||+|+++.|+|+.|...++..|++++.+++.++++|+
T Consensus 82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 160 (412)
T 1yaa_A 82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKF-FPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHH-CTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHh-CCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCc
Confidence 99999776776677899999 999999999884 3334 599999999999999999999999999999983233578
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC-CCccchHHHH
Q 013892 252 LETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE-KKFHSFKKVS 330 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~-~~~~s~~~~~ 330 (434)
+|+++|++++++. .....++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..+.++..+.
T Consensus 161 ~d~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 237 (412)
T 1yaa_A 161 LDLNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGV 237 (412)
T ss_dssp ECHHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHH
T ss_pred cCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHH
Confidence 9999999999762 11234445589999999999999999999999999999999999999887641 0122332222
Q ss_pred hhhCCCCCC-ceEEEEecCCCCCCCCCCceeEEEEEec----CCHH----HHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 331 RSMGYGEKD-ISLVSFQSVSKGYYGECGKRGGYMEVTG----FSAE----VREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 331 ~~l~~~~~~-~~~i~i~S~SK~~~g~~G~R~G~~~~~~----~~~~----~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
. .. ++ .++|+++||||.| |++|+|+||+++++ .+++ +++++..... .+.+++.++|.++..++++
T Consensus 238 ~-~~---~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1yaa_A 238 E-KL---STVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLET 312 (412)
T ss_dssp H-HT---TTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred h-cC---CCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Confidence 1 11 20 0379999999999 77899999996213 1455 7788777444 5667799999999988876
Q ss_pred CC-------CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PK-------VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 401 ~~-------~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.. ++++.+++++++++.+.+.|+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 313 PELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 52 566778888999999999988764
No 47
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.3e-35 Score=296.79 Aligned_cols=265 Identities=17% Similarity=0.233 Sum_probs=218.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+.+++.+.+... ...|++. ..++|+++++++.+++|+++++++|++|+|+++++..++++++ ++||+|
T Consensus 44 ~~~~~v~~a~~~~~~~~----~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~-~~gd~v 116 (399)
T 1c7n_A 44 KNPPELIEGLKKYLDET----VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT-KPGDGV 116 (399)
T ss_dssp CCCHHHHHHHHHHHHHC----CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC-CTTCEE
T ss_pred CCCHHHHHHHHHHHhcC----CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc-CCCCEE
Confidence 45788999988888652 4568764 8999999999999888888889999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
+++.|+|+.+...++..|++++.++++ ++++|.+|+++|++++++. ++++|++++|+||||.+++.+++++|++
T Consensus 117 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~ 191 (399)
T 1c7n_A 117 IIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKKDELQKIKD 191 (399)
T ss_dssp EECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCHHHHHHHHH
T ss_pred EEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCcCHHHHHHHHH
Confidence 999999999999999999999999986 3335779999999998721 7999999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|+++|+++|+||+|.++.+++.. +.++..+...+. + ++|++.|+||.| |++|+|+||+++ .++++++.+.
T Consensus 192 ~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~~---~--~~i~~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~l~ 262 (399)
T 1c7n_A 192 IVLKSDLMLWSDEIHFDLIMPGYE-HTVFQSIDEQLA---D--KTITFTAPSKTF-NIAGMGMSNIII--KNPDIRERFT 262 (399)
T ss_dssp HHHHSSCEEEEECTTTTCBCTTCC-CCCGGGSCHHHH---T--TEEEEECSHHHH-TCGGGCCEEEEC--CCHHHHHHHH
T ss_pred HHHHcCCEEEEEccccccccCCCC-cccHHHcCcccc---C--cEEEEEeChhhc-cccchheEEEEE--CCHHHHHHHH
Confidence 999999999999999998886542 334432211101 2 379999999999 889999999976 2477999888
Q ss_pred HHhhc--ccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVASV--NLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 378 ~~~~~--~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
..... +.+++.++|.++..+++. .+++++.++.++++++.+.+.|++
T Consensus 263 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 312 (399)
T 1c7n_A 263 KSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEV 312 (399)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 76653 236789999988877764 244566777888888888888876
No 48
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=9.5e-36 Score=299.60 Aligned_cols=284 Identities=18% Similarity=0.251 Sum_probs=227.9
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|...+. ...|+.+++++.+.+... ....|++..|..++|+++
T Consensus 33 ~~~i~l~~g~p~~~~~-------------------------~~~~~~v~~a~~~~~~~~---~~~~y~~~~~~~~lr~~l 84 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKN-------------------------LLTSAAQIKKLKEAIDSQ---ECNGYFPTVGSPEAREAV 84 (416)
T ss_dssp SCCEECCCCCTTTTSC-------------------------SCCCHHHHHHHHHHHHTT---CSSSCCCTTCCHHHHHHH
T ss_pred CCeEEecCcCCCcccC-------------------------CCCCHHHHHHHHHHhhCC---ccCCcCCCCCCHHHHHHH
Confidence 5789999999863111 135788999988888753 256798888999999999
Q ss_pred HHHHHh------hcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCC
Q 013892 177 AAGIEA------RDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250 (434)
Q Consensus 177 a~~~~~------~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (434)
++++.+ ++|+++++++|++|+|+++++..+++.++ ++||+|+++.|+|+.+...++..|++++.++++++++|
T Consensus 85 a~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 163 (416)
T 1bw0_A 85 ATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAIC-DAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDW 163 (416)
T ss_dssp HHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhC-CCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCC
Confidence 999983 35667889999999999999999999998 79999999999999999999999999999998766568
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC---CccchH
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK---KFHSFK 327 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~---~~~s~~ 327 (434)
.+|+++|++++++ +++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++.. .+.++.
T Consensus 164 ~~d~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 237 (416)
T 1bw0_A 164 EADLDEIRRLKDD------KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVA 237 (416)
T ss_dssp EECHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTT
T ss_pred CCCHHHHHHHhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHH
Confidence 8999999998875 7899999999999999999999999999999999999999999998886541 133332
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-----HHHHHHHHHhhcccCCchHHHHHHHHHcCC--
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-----EVREQIYKVASVNLCSNISGQILASLVMSP-- 400 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~-- 400 (434)
.+. .+.++|+++||||.| +++|+|+||+++. ++ .+...+.+......+++.+.|.++..+++.
T Consensus 238 ----~~~---~~~~~i~~~s~sK~~-~~~Glr~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 307 (416)
T 1bw0_A 238 ----DFE---TTVPRVILGGTAKNL-VVPGWRLGWLLYV--DPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP 307 (416)
T ss_dssp ----SSC---CSCCEEEEEESTTTT-SCGGGCCEEEEEE--CTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC
T ss_pred ----Hcc---CCCcEEEEecchhhC-CCCCceEEEEEee--CchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc
Confidence 122 222479999999999 7899999999862 32 233333333323447889999999888874
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++++.+++++++++.+.+.|++.
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (416)
T 1bw0_A 308 QEHLDQIVAKIEESAMYLYNHIGEC 332 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2345667778888888888887653
No 49
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.7e-35 Score=292.44 Aligned_cols=266 Identities=14% Similarity=0.169 Sum_probs=225.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|++.. +.|+.+++++.+.+.. ...|++..+ .++|+++
T Consensus 30 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~-----~~~y~~~~~-~~lr~~l 74 (365)
T 3get_A 30 KEVIKLASNENPF-----------------------------GTPPKAIECLRQNANK-----AHLYPDDSM-IELKSTL 74 (365)
T ss_dssp SCCEECSSCCCTT-----------------------------CSCHHHHHHHHHHGGG-----TTSCCCTTC-HHHHHHH
T ss_pred CceEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHh-----hccCCCCCh-HHHHHHH
Confidence 5789999887665 4588899998888764 567888776 8999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++ ++++++|++|+|+++++..++..++ ++||+|+++.|+|..+...++..|++++.+++ .+.+| +|+++
T Consensus 75 a~~~------~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~ 145 (365)
T 3get_A 75 AQKY------KVQNENIIIGAGSDQVIEFAIHSKL-NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKK 145 (365)
T ss_dssp HHHH------TCCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHH
T ss_pred HHHh------CCCcceEEECCCHHHHHHHHHHHHh-CCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHH
Confidence 9998 3578899999999999999999998 79999999999999999999999999999998 33467 99999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc--CCCCCccchHHHHhhhC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY--VPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~--~~~~~~~s~~~~~~~l~ 334 (434)
|++++++ ++++|++++|+||||.+++.+++.+|+++| ++|+++|+||+|.++.| .+.. +.+.......
T Consensus 146 l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~-- 215 (365)
T 3get_A 146 LYETHKD------EIKLIFLCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKK-HLEPCELIKE-- 215 (365)
T ss_dssp HHHHTTT------TEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGG-CCCHHHHHHH--
T ss_pred HHHHhCC------CCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcc-cccHhHHhcc--
Confidence 9999875 899999999999999999999999999998 57999999999999875 4322 3344333221
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
.+ ++++++||||.| |++|+|+||+++ ++++++.+......+ +++.++|.++..++++.+++++.+++++++
T Consensus 216 --~~--~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 286 (365)
T 3get_A 216 --FD--NVLYLGTFSKLY-GLGGLRIGYGIA---NANIISAFYKLRAPF-NVSNLALKAAVAAMDDDEFTEKTLENNFSQ 286 (365)
T ss_dssp --CT--TEEEEEESSSTT-SCTTTCCEEEEE---CHHHHHHHHHHSCTT-CSCHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred --CC--CEEEEeecchHh-cCcchheEEEEc---CHHHHHHHHHhcCCC-CcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 12 479999999999 899999999987 999999998876544 689999999999998766677888889999
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
++.+.+.|+++
T Consensus 287 ~~~l~~~l~~~ 297 (365)
T 3get_A 287 MELYKEFAKKH 297 (365)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 99999888775
No 50
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.2e-35 Score=295.75 Aligned_cols=301 Identities=21% Similarity=0.303 Sum_probs=233.3
Q ss_pred cChhhhcccc-cccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCC
Q 013892 61 LNPKVLKCEY-AVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGL 139 (434)
Q Consensus 61 ~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~ 139 (434)
+|+++.++.. ..+..+..+...+..+ . +.+++|+++.|++.. .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~i~l~~~~~~~-----------------------------~ 46 (400)
T 3asa_A 3 RNPHFVSLTKNYLFADLQKRVAQFRLE---N----PQHTVINLSIGDTTQ-----------------------------P 46 (400)
T ss_dssp CCHHHHTCCCCCHHHHHHHHHHHHHHH---C----TTSCCEECSSCCCCC-----------------------------C
T ss_pred cchhhhccCCcccHHHHHHHHHHhhhh---c----CCCceEeccCCCCCC-----------------------------C
Confidence 5788877765 3355566666655433 1 236799999998865 3
Q ss_pred CCHHHHHHHHHHHHcCCC-CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.|+.+++++.+.+..... .....|++..|..++|+++++++. +|. +++++|++|+|+++++..++.. + .+||+|
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~~-~-~~gd~V 121 (400)
T 3asa_A 47 LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLSF-F-GPNQTV 121 (400)
T ss_dssp CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHHH-H-CSSCEE
T ss_pred CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHHH-c-CCCCEE
Confidence 477888888887765321 125679888899999999999974 354 6789999999999999997654 4 689999
Q ss_pred EEcCCCChhHHHHHHHcCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
+++.|+|+.+...++..|++ ++.++++++++|..|++.+ + ++++|++++||||||.+++.+++++|++
T Consensus 122 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~ 190 (400)
T 3asa_A 122 AIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED-----T------HIDILCLCSPNNPTGTVLNKDQLRAIVH 190 (400)
T ss_dssp EEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT-----C------CCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc-----c------CccEEEEeCCCCCCCCcCCHHHHHHHHH
Confidence 99999999999999999999 9999987655566664321 1 6899999999999999999999999999
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH-----
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV----- 372 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~----- 372 (434)
+|+++|+++|+||+|.++.+++.. ..++.. ++ ...+ ++|++.||||.| |++|+|+||+++ ++++
T Consensus 191 ~~~~~~~~li~De~~~~~~~~~~~-~~~~~~----~~-~~~~-~~i~~~s~sK~~-g~~GlriG~~~~---~~~~~~~~~ 259 (400)
T 3asa_A 191 YAIEHEILILFDAAYSTFISDPSL-PKSIFE----IP-DARF-CAIEINSFSKPL-GFAGIRLGWTVI---PQELTYADG 259 (400)
T ss_dssp HHHHTTCEEEEECTTGGGCCCTTS-CSSGGG----ST-TGGG-TEEEEEECCGGG-TTTTCCCEEEEC---CTTCBCTTS
T ss_pred HHHHcCCEEEEEchhhhhhcCCCC-CCchhh----CC-CCCC-ceEEEecchhhc-CCcchheeEEee---Chhhccchh
Confidence 999999999999999997776531 223322 11 0012 479999999999 899999999976 6666
Q ss_pred --HHHHHHH-hh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 373 --REQIYKV-AS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 373 --~~~l~~~-~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+... .. .+.+++.+.|.++..++++. +.++.++.++++++.+.+.|++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~ 315 (400)
T 3asa_A 260 HFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLAT 315 (400)
T ss_dssp CBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 5655432 22 34468999999998888765 67889999999999999999875
No 51
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=2e-35 Score=290.55 Aligned_cols=255 Identities=20% Similarity=0.221 Sum_probs=217.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+++++.+.+.. ...|+ ..|..++|+++++++ ++++++|++|+|+++++..++..++ ++||+|
T Consensus 29 ~~~~~v~~a~~~~~~~-----~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~l~-~~gd~v 95 (354)
T 3ly1_A 29 GMSPKAQAAARDAVVK-----ANRYA-KNEILMLGNKLAAHH------QVEAPSILLTAGSSEGIRAAIEAYA-SLEAQL 95 (354)
T ss_dssp CCCHHHHHHHHHTGGG-----TTSCC-HHHHHHHHHHHHHHT------TSCGGGEEEESHHHHHHHHHHHHHC-CTTCEE
T ss_pred CCCHHHHHHHHHHHhh-----CcCCC-CCchHHHHHHHHHHh------CCChHHEEEeCChHHHHHHHHHHHh-CCCCeE
Confidence 5688899998887764 45674 467899999999997 3578899999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.+...++..|++++.+++++ +|++|+++|++++++ +.++++|++++|+||||.+++.+++++|+++
T Consensus 96 l~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 169 (354)
T 3ly1_A 96 VIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAA----YSGPSIVYLVNPNNPTGTITPADVIEPWIAS 169 (354)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHT----CSSCEEEEEESSCTTTCCCCCHHHHHHHHHT
T ss_pred EECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhcc----CCCCCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 9999999999999999999999999874 479999999999982 0179999999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
| ++|+++|+||+|.++.+++. ..+........ .+ ++++++||||.| |++|+|+||+++ ++++++.+..
T Consensus 170 ~-~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~----~~-~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~ 237 (354)
T 3ly1_A 170 K-PANTMFIVDEAYAEFVNDPR--FRSISPMITQG----AE-NIILLKTFSKIH-AMAGMRVGYAVA---HPTVIALMGR 237 (354)
T ss_dssp C-CTTEEEEEECTTGGGCCCTT--CCCSHHHHHTT----CS-SEEEEEESSSTT-CCGGGCCEEEEC---CHHHHHHHGG
T ss_pred C-CCCeEEEEeccHHHhccccc--cCCHHHHhhhc----CC-CEEEEeeChhhc-cChhhhheeeec---CHHHHHHHHH
Confidence 9 89999999999999887654 33443433321 12 479999999999 899999999987 8999999887
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... .+++.++|.++..++++.+++++.+++++++++.+.+.|+++
T Consensus 238 ~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 238 YVAG-EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL 283 (354)
T ss_dssp GTTC-SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCC-CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7655 588999999999999876667788889999999999988876
No 52
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.7e-35 Score=295.43 Aligned_cols=274 Identities=15% Similarity=0.143 Sum_probs=215.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHhc-CCCC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR-SEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~~-~~gd 216 (434)
.++.+.+++.+.+... ....|++..|..++|+++++++.++.+.++++++|++ |+|+++++..+++.+.. .+||
T Consensus 45 ~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd 121 (396)
T 2q7w_A 45 VLTSVKKAEQYLLENE---TTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVK 121 (396)
T ss_dssp CCHHHHHHHHHHHHHC---CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCC
T ss_pred CcHHHHHHHHhhcCcc---cccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCC
Confidence 4678888888777653 2568999999999999999999765444456889998 99999999999877631 5899
Q ss_pred EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+|+++.|+|+.|...++..|++++.++++++++|++|+++|++++++. ..+++++++++||||||.+++.+++++|+
T Consensus 122 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~ 198 (396)
T 2q7w_A 122 RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198 (396)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999865456899999999988641 11367788899999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH----HH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA----EV 372 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~----~~ 372 (434)
++|+++|+++|+||+|.++.+++...+.++..+.. .. + ++|+++||||.| |++|+|+||+++.+.++ ++
T Consensus 199 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~---~--~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~ 271 (396)
T 2q7w_A 199 QLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAA-MH---K--ELIVASSYSXNF-GLYNERVGACTLVAADSETVDRA 271 (396)
T ss_dssp HHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHH-HC---S--CEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHHH
T ss_pred HHHHHCCCEEEEecccccccCCccchhHHHHHHHh-cC---C--cEEEEEeccccc-cccccccceEEEEcCCHHHHHHH
Confidence 99999999999999999987753111233332221 11 2 479999999999 88999999997422244 45
Q ss_pred HHHHHHHhh-cccCCchHHHHHHHHHcCCC-------CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVAS-VNLCSNISGQILASLVMSPP-------KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 373 ~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++.+..... .+.+++.++|.++..++++. ++.++.++.++++++.+.+.|++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 272 FSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 565555433 55567999999999999864 3456777888899999998888753
No 53
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=3.3e-35 Score=293.11 Aligned_cols=263 Identities=16% Similarity=0.210 Sum_probs=216.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHH-HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKG-LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~-lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
..|+.+.+++.+.+.. ....|++. ..+ +|+++++++.+++|+++++++|++|+|+++++..++++++ ++||+
T Consensus 41 ~~~~~v~~a~~~~~~~----~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~-~~gd~ 113 (390)
T 1d2f_A 41 ATAPCIIEALNQRLMH----GVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWS-ETGEG 113 (390)
T ss_dssp CCCHHHHHHHHHHHTT----CCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSS-CTTCE
T ss_pred CCCHHHHHHHHHHHhC----CCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhc-CCCCE
Confidence 4578899998888764 24578775 678 9999999999988988889999999999999999999998 79999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCC-CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEAT-GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
|+++.|+|+.+...++..|++++.++++.++ +|.+|+++|++++++. ++++|++++|+||||.+++.+++++|+
T Consensus 114 vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~ 188 (390)
T 1d2f_A 114 VVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDELEIMA 188 (390)
T ss_dssp EEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCTTHHHHHH
T ss_pred EEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 9999999999999999999999999987553 5779999999998642 689999999999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
++|+++|+++|+||+|.++.+++.. +.++.. +...+.+ + +.||||.| |++|+|+||+++ .++++++.+
T Consensus 189 ~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~----~~~~~~d---~-~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~~ 256 (390)
T 1d2f_A 189 DLCERHGVRVISDEIHMDMVWGEQP-HIPWSN----VARGDWA---L-LTSGSKSF-NIPALTGAYGII--ENSSSRDAY 256 (390)
T ss_dssp HHHHHTTCEEEEECTTTTCBCSSSC-CCCGGG----TCCSSEE---E-EECSHHHH-TCGGGCCEEEEE--CSHHHHHHH
T ss_pred HHHHHcCCEEEEEccccccccCCCC-CcCHHH----cchhhHh---h-ccCccHhh-cccChhheEEEE--CCHHHHHHH
Confidence 9999999999999999998886542 344332 2211113 3 99999999 789999999986 247888888
Q ss_pred HHHhh---cccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 377 YKVAS---VNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 377 ~~~~~---~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..... .+.+++.++|.++..+++. .+++++.++.++++++.+.+.|++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (390)
T 1d2f_A 257 LSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA 309 (390)
T ss_dssp HHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77653 2347888998888777764 2345667778888888888888763
No 54
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=5.2e-35 Score=291.11 Aligned_cols=277 Identities=14% Similarity=0.240 Sum_probs=230.7
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|++.. ..|+.+++++.+.+.+. ...|++ +..++++++
T Consensus 32 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~----~~~y~~--~~~~~~~~l 76 (391)
T 4dq6_A 32 NDLLPMWVADMDF-----------------------------KAAPCIIDSLKNRLEQE----IYGYTT--RPDSYNESI 76 (391)
T ss_dssp SCSEECCSSSCSS-----------------------------CCCHHHHHHHHHHHTTC----CCCCBC--CCHHHHHHH
T ss_pred CCceeccccCCCC-----------------------------CCCHHHHHHHHHHHhCC----CCCCCC--CCHHHHHHH
Confidence 5789999998775 45888999998888652 455665 568999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecC--CCCCCCCCH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD--EATGWGLET 254 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~ 254 (434)
++++.+.+|.++++++|++|+|+++++..++..++ ++||+|+++.|+|..+...++..|++++.++++ ++++|.+|+
T Consensus 77 ~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~ 155 (391)
T 4dq6_A 77 VNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT-KANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDY 155 (391)
T ss_dssp HHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCH
T ss_pred HHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeH
Confidence 99999999988889999999999999999999998 799999999999999999999999999999988 556788999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
++|++++++ +++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++..+..+..
T Consensus 156 ~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~~ 227 (391)
T 4dq6_A 156 EDIENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHK-HIPMASISKEFE 227 (391)
T ss_dssp HHHHHHCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCC-CCCGGGSCHHHH
T ss_pred HHHHHHhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCC-ccCHHHcCcccc
Confidence 999998853 889999999999999999999999999999999999999999998887642 344433322111
Q ss_pred CCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccCCchHHHHHHHHHcCCC-CCChHHHHHH
Q 013892 335 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSPP-KVGDESYESY 411 (434)
Q Consensus 335 ~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~ 411 (434)
+ +++++.||||.+ |++|+|+||+++ .++++++.+..... ...+++.+++.++...+... +++++.++.+
T Consensus 228 ---~--~~i~~~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 299 (391)
T 4dq6_A 228 ---K--NTITCMAPTKTF-NIAGLQSSYVVL--PDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYL 299 (391)
T ss_dssp ---H--TEEEEECSHHHH-TCGGGCCEEEEC--CSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ---C--cEEEEEechhhc-cCcccceEEEEe--CCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 1 479999999999 889999999976 34589998887754 34478888998888777653 3356777888
Q ss_pred HHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARR 425 (434)
Q Consensus 412 ~~~r~~l~~~L~~~ 425 (434)
+++++.+.+.|++.
T Consensus 300 ~~~~~~l~~~l~~~ 313 (391)
T 4dq6_A 300 ESNIDFAIKYINEN 313 (391)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 88888888888764
No 55
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=6.2e-35 Score=294.57 Aligned_cols=279 Identities=18% Similarity=0.269 Sum_probs=234.1
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|++.+ ..|+.+++++.+.+... ...|++. ..++++++
T Consensus 61 ~~~i~~~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~----~~~y~~~--~~~l~~~l 105 (421)
T 3l8a_A 61 PELLQMWVADMDF-----------------------------LPVPEIKEAIINYGREH----IFGYNYF--NDDLYQAV 105 (421)
T ss_dssp TTCEECCSSCCCS-----------------------------CCCHHHHHHHHHHHHHC----CSSCBCC--CHHHHHHH
T ss_pred CCeeecccCCCCC-----------------------------CCCHHHHHHHHHHHhcC----CcCCCCC--CHHHHHHH
Confidence 5788999888776 45888999999888762 5567664 38999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecC-CCCCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD-EATGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~ 255 (434)
++++.+++|+++++++|++|+|+++++..+++.++ ++||+|+++.|+|..+...++..|.+++.++++ .+++|.+|++
T Consensus 106 ~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~-~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 184 (421)
T 3l8a_A 106 IDWERKEHDYAVVKEDILFIDGVVPAISIALQAFS-EKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFE 184 (421)
T ss_dssp HHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-CTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHH
T ss_pred HHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhc-CCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHH
Confidence 99999999988899999999999999999999998 799999999999999999999999999999987 5567889999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++. ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++..+..+.
T Consensus 185 ~le~~i~~~-----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~-- 256 (421)
T 3l8a_A 185 QLEKDIIDN-----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT-HHSLNTLDASY-- 256 (421)
T ss_dssp HHHHHHHHT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC-CCCGGGSCTTG--
T ss_pred HHHHHhhcc-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-CccHHHcCchh--
Confidence 999999842 7999999999999999999999999999999999999999999999887642 44443332111
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh--cccCCchHHHHHHHHHcCC-CCCChHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILASLVMSP-PKVGDESYESYC 412 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~ 412 (434)
.+ .++++.|+||.| |++|+|+||+++ .++++++.+..... ...+++++++.++..+++. .+++++.++.++
T Consensus 257 --~~-~~i~~~s~sK~~-g~~G~~~G~~~~--~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~ 330 (421)
T 3l8a_A 257 --KD-FTIILSSATKTF-NIAGTKNSFAII--QNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIE 330 (421)
T ss_dssp --GG-TEEEEECSHHHH-TCGGGCCEEEEC--CSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred --cC-cEEEEEeChhhc-cCchhheEeEEc--CCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 12 479999999999 889999999976 23899999877653 4447899999988888764 234567778888
Q ss_pred HHHHHHHHHHHHH
Q 013892 413 AERDGILSSLARR 425 (434)
Q Consensus 413 ~~r~~l~~~L~~~ 425 (434)
++++.+.+.|+++
T Consensus 331 ~~~~~l~~~L~~~ 343 (421)
T 3l8a_A 331 GNIKLVIKELEAK 343 (421)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 8888888888765
No 56
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.8e-35 Score=298.66 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=200.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH--HHHHHHHhcCC------------CCEEEEcCCCC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV--HMMMQLLIRSE------------NDGILCPIPQY 225 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al--~~~l~~l~~~~------------gd~Vlv~~p~y 225 (434)
...|++..|.++||+++|+++ ++++++|++|+|+++++ .++++.+. .+ +|+|+++.|+|
T Consensus 69 ~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~al~l~~~~~~l~-~~~~~g~~~~~~~d~~~Vl~~~p~y 141 (422)
T 3d6k_A 69 CRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLNIMFDLISWSYT-WGNNDSSRPWSAEEKVKWLCPVPGY 141 (422)
T ss_dssp TTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHHHHHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEEESCC
T ss_pred hhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHHHHHHHHHHHhc-CcccccccccccCCCCEEEEeCCcc
Confidence 568999999999999999998 36789999999999997 67778776 45 34799999999
Q ss_pred hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-EecCCCCCccCCCHHHHHHHHHHHH-HcC
Q 013892 226 PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFCK-KEG 303 (434)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~~~~-~~~ 303 (434)
+.|...++..|++++.++++++ ++|+++|++++++. ++++|+ +++||||||.+++.+++++|+++|+ ++|
T Consensus 142 ~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~ 213 (422)
T 3d6k_A 142 DRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPD 213 (422)
T ss_dssp HHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTT
T ss_pred HHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccC
Confidence 9999999999999999999764 58999999988642 688888 5799999999999999999999999 999
Q ss_pred CEEEEccCCCCCccCCC-CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-
Q 013892 304 LVLLADEVYQENVYVPE-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~-~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 381 (434)
++||+||+|.++.|... .++.++..+...++ . .+ ++|+++||||. +++|+|+||+++ ++++++.+.+...
T Consensus 214 ~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~i~~~S~SK~--~~~GlriG~~~~---~~~l~~~l~~~~~~ 285 (422)
T 3d6k_A 214 FRIVWDNAYALHTLSDEFPIVHNVIEFAQAAG-N-PN-RFWFMSSTSKI--THAGSGVSFFAS---SKENIEWYASHANV 285 (422)
T ss_dssp CEEEEECTTTTCBSSSCCCCCCCHHHHHHHTT-C-TT-CEEEEEESTTT--SCTTSSCEEEEC---CHHHHHHHHHHHHH
T ss_pred CEEEEECCccccccCCCCCCCcChhhHhhccC-C-CC-cEEEEcChhhh--cCcccceEEEEe---CHHHHHHHHHHHHh
Confidence 99999999986434322 12445544322222 1 22 58999999997 358999999987 8999999988765
Q ss_pred cccCCchHHHHHHHHHcCC-C---CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 382 VNLCSNISGQILASLVMSP-P---KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 382 ~~~~~~~~~q~~~~~~l~~-~---~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...+++.++|.++..++++ . +++++.++.|+++|+.+.+.|++..
T Consensus 286 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l 334 (422)
T 3d6k_A 286 RGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRL 334 (422)
T ss_dssp HCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5568899999999999987 2 4466778888889999998887753
No 57
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=8.1e-35 Score=289.41 Aligned_cols=266 Identities=23% Similarity=0.338 Sum_probs=223.7
Q ss_pred cceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHH
Q 013892 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (434)
Q Consensus 98 ~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (434)
++|+++.|.|.. ..|+.+.+++.+.+.. ...|++..|..++|++++
T Consensus 26 ~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~-----~~~y~~~~~~~~l~~~la 71 (381)
T 1v2d_A 26 GAVNLGQGFPSN-----------------------------PPPPFLLEAVRRALGR-----QDQYAPPAGLPALREALA 71 (381)
T ss_dssp TCEECCCCSCSS-----------------------------CCCHHHHHHHHHHTTT-----SCSCCCTTCCHHHHHHHH
T ss_pred CeEEecCCCCCC-----------------------------CCCHHHHHHHHHHHHH-----hcCCCCCCCCHHHHHHHH
Confidence 589999998865 3477888888887754 346888889999999999
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecC--CCCCCCCCHH
Q 013892 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLD--EATGWGLETS 255 (434)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~ 255 (434)
+++ ++++++|++|+|+++++..+++.++ .+||+|+++.|+|+.+...++..|++++.++++ ++ +|.+|++
T Consensus 72 ~~~------~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~ 143 (381)
T 1v2d_A 72 EEF------AVEPESVVVTSGATEALYVLLQSLV-GPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLS 143 (381)
T ss_dssp HHH------TSCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHH
T ss_pred Hhc------CCChhhEEEcCChHHHHHHHHHHhC-CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHH
Confidence 996 4567899999999999999999998 799999999999999999999999999999986 33 4789999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
+|++++++ ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.++.. ..++... .
T Consensus 144 ~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~--~~~~~~~----~- 210 (381)
T 1v2d_A 144 ALEKALTP------RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGER--PRRLREF----A- 210 (381)
T ss_dssp HHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC--CCCHHHH----C-
T ss_pred HHHHhcCc------CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC--CCCHHHh----c-
Confidence 99998865 799999999999999999999999999999999999999999999887322 3444432 1
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC---CCCChHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP---PKVGDESYESY 411 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~ 411 (434)
.+ .++++.|+||.| |++|+|+||+++ ++++++.+..... ...+++.+.|.++..+++. .+++++.++++
T Consensus 211 --~~-~~~~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 283 (381)
T 1v2d_A 211 --PE-RTFTVGSAGKRL-EATGYRVGWIVG---PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGY 283 (381)
T ss_dssp --TT-TEEEEEEHHHHT-TCGGGCCEEEEC---CTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred --CC-CEEEEeechhhc-CCcccceEEEEe---CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 12 368999999999 889999999987 7888888877654 4557888999888888763 34567788889
Q ss_pred HHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARR 425 (434)
Q Consensus 412 ~~~r~~l~~~L~~~ 425 (434)
+++++.+.+.|++.
T Consensus 284 ~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 284 RRRRDLLAGGLRAM 297 (381)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
Confidence 99999999988773
No 58
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=5.2e-35 Score=292.52 Aligned_cols=276 Identities=21% Similarity=0.316 Sum_probs=223.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|.|+..+ ..++.+.+++.+.+..... ....|++..|..++|+++
T Consensus 32 ~~~i~l~~g~~~~~~---------------------------~~~~~v~~a~~~~~~~~~~-~~~~y~~~~~~~~l~~~l 83 (397)
T 2zyj_A 32 PGILSFAGGLPAPEL---------------------------FPKEEAAEAAARILREKGE-VALQYSPTEGYAPLRAFV 83 (397)
T ss_dssp TTCEEESSCCCCGGG---------------------------CCHHHHHHHHHHHHHHHHH-HHTSCCCTTCCHHHHHHH
T ss_pred CCceecCCCCCCchh---------------------------CCHHHHHHHHHHHHHhcch-hhhCCCCCCCCHHHHHHH
Confidence 468999999886521 1345677777777654211 135798888999999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++ | +++++|++|+|+++++..++++++ ++||+|+++.|+|+.+...++..|++++.++++++ ++|+++
T Consensus 84 a~~~----g--~~~~~v~~~~g~~~al~~~~~~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~ 153 (397)
T 2zyj_A 84 AEWI----G--VRPEEVLITTGSQQALDLVGKVFL-DEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDA 153 (397)
T ss_dssp HHHH----T--SCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHH
T ss_pred HHHh----C--CChhhEEEeccHHHHHHHHHHHhC-CCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHH
Confidence 9998 3 567899999999999999999998 79999999999999999999999999999998754 589999
Q ss_pred HHHHHHHHHhcCCCeeEEE-EecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 257 VKKQLEAAKAKGITVRALV-VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
|++++++. ++++|+ +++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++..+.....
T Consensus 154 l~~~l~~~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~~- 226 (397)
T 2zyj_A 154 LEEVLKRE-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEAR-LPSLFELAREAG- 226 (397)
T ss_dssp HHHHHHHC-----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCC-CCCHHHHHHHHT-
T ss_pred HHHHHhhc-----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCC-CCchhhhCcccC-
Confidence 99999752 578875 5799999999999999999999999999999999999998886542 345544422100
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC--CCChHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP--KVGDESYESYC 412 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~ 412 (434)
.+ ++++++|+||.| | +|+|+||+++ ++++++.+..... ...+.+.++|.++..+++.. +++++.++.++
T Consensus 227 -~~--~~i~~~s~sK~~-~-~G~r~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 298 (397)
T 2zyj_A 227 -YP--GVIYLGSFSKVL-S-PGLRVAFAVA---HPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYR 298 (397)
T ss_dssp -CC--CEEEEEESTTTT-C-GGGCCEEEEC---CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred -CC--eEEEEecccccc-c-ccceeEEEec---CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 01 479999999999 7 9999999987 8999999887654 44567899999999999875 34566777888
Q ss_pred HHHHHHHHHHHHH
Q 013892 413 AERDGILSSLARR 425 (434)
Q Consensus 413 ~~r~~l~~~L~~~ 425 (434)
++++.+.+.|++.
T Consensus 299 ~~~~~l~~~L~~~ 311 (397)
T 2zyj_A 299 EKAQAMLHALDRE 311 (397)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888888765
No 59
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=7.2e-35 Score=287.74 Aligned_cols=263 Identities=19% Similarity=0.223 Sum_probs=218.6
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|++.. .+|+.+++++.+.+.. ...|+ ..|..++|+++
T Consensus 32 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~-----~~~y~-~~~~~~lr~~l 76 (363)
T 3ffh_A 32 TKITKLSSNENPL-----------------------------GTSKKVAAIQANSSVE-----TEIYP-DGWASSLRKEV 76 (363)
T ss_dssp SCCEECSSCSCTT-----------------------------CCCHHHHHHHHTCBSC-----CCBC-----CHHHHHHH
T ss_pred CceEEccCCCCCC-----------------------------CCCHHHHHHHHHHHHH-----hhcCC-CcchHHHHHHH
Confidence 5899999987765 4578888887665432 45674 46799999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++ ++++++|++|+|+++++..+++.++ ++||+|+++.|+|..+...++..|++++.+++++ ++.+|+++
T Consensus 77 a~~~------~~~~~~v~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~ 147 (363)
T 3ffh_A 77 ADFY------QLEEEELIFTAGVDELIELLTRVLL-DTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEG 147 (363)
T ss_dssp HHHH------TCCGGGEEEESSHHHHHHHHHHHHC-STTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHH
T ss_pred HHHh------CCChhhEEEeCCHHHHHHHHHHHHc-cCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHH
Confidence 9998 3678899999999999999999998 7999999999999999999999999999999875 47899999
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
|++++++ ++++|++++|+||||.+++.+++.+|++.|++ |+++|+||+|.++.+ +. ..+...... .
T Consensus 148 l~~~i~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~--~~~~~~~~~----~ 213 (363)
T 3ffh_A 148 MLNAIDE------KTTIVWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ--PEKHEKLVR----T 213 (363)
T ss_dssp HHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC--CCCCGGGGG----T
T ss_pred HHHhccc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc--ccCHHHHhh----c
Confidence 9999876 79999999999999999999999999888887 999999999999877 32 222222211 1
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ ++|++.||||.| |++|+|+||+++ ++++++.+..... ..+++.++|.++..++++.+++++.+++++++++
T Consensus 214 ~~--~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 286 (363)
T 3ffh_A 214 YK--NLIITRTFSKIY-GLASARVGYGIA---DKEIIRQLNIVRP-PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIK 286 (363)
T ss_dssp CT--TEEEEEESSSTT-CCSSCCCEEEEE---CHHHHHHHHHTCC-SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CC--CEEEEeechhhh-cCchhceeeeec---CHHHHHHHHHhCC-CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 12 479999999999 889999999988 9999999987765 4478999999999999866666778888888888
Q ss_pred HHHHHHHH
Q 013892 417 GILSSLAR 424 (434)
Q Consensus 417 ~l~~~L~~ 424 (434)
.+.+.|++
T Consensus 287 ~l~~~l~~ 294 (363)
T 3ffh_A 287 QYEAFAKR 294 (363)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 88888876
No 60
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-35 Score=299.90 Aligned_cols=252 Identities=16% Similarity=0.224 Sum_probs=210.0
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCC---EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-c
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPND---IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL-H 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~---i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~-~ 235 (434)
...|++..|..++|+++++++.+++ +++++++ |++|+|+++++..+++.++ ++||+|+++.|+|+.+...++. .
T Consensus 81 ~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~~ 158 (430)
T 2x5f_A 81 IFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALTHGLSLVGDLFV-NQDDTILLPEHNWGNYKLVFNTRN 158 (430)
T ss_dssp TSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHHHHHHHHHHHHC-CTTCEEEEESSCCTHHHHHHTTTT
T ss_pred ccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCCchHHHHHHHHHHh-CCCCEEEEcCCcCccHHHHHHHhc
Confidence 5689998999999999999998874 6778889 9999999999999999998 7999999999999999999999 9
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH-----cCCEEEEcc
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-----EGLVLLADE 310 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~-----~~~~li~De 310 (434)
|++++.+++++++ |++|+++|++++++. +.+++++++++||||||.+++.+++++|+++|++ +|+++|+||
T Consensus 159 g~~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De 234 (430)
T 2x5f_A 159 GANLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDD 234 (430)
T ss_dssp CCEEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCeEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEeh
Confidence 9999999987654 789999999999752 2268899999999999999999999999999999 999999999
Q ss_pred CCCCCccCCCCCccchH-HHHhhhCCCCCC-ceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-----cc
Q 013892 311 VYQENVYVPEKKFHSFK-KVSRSMGYGEKD-ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-----VN 383 (434)
Q Consensus 311 ay~~~~~~~~~~~~s~~-~~~~~l~~~~~~-~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-----~~ 383 (434)
+|.++.+++. ++.++. .+. .. .++ +.+|+++||||.| |++|+|+||+++.+.++++++.+..... .+
T Consensus 235 ~~~~~~~~~~-~~~~~~~~~~-~~---~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~ 308 (430)
T 2x5f_A 235 AYYGLFYEDV-YTQSLFTALT-NL---HSNAILPIRLDGATKEF-FAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNI 308 (430)
T ss_dssp TTTTCBCSSS-CCSCHHHHHH-TT---CCTTEEEEEEEEHHHHT-TCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTT
T ss_pred hcccccCCcc-cchHHHHHHh-hc---cCCcceEEEEEecccCC-CCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhccc
Confidence 9999888764 244543 321 11 122 2279999999999 8899999999764447888888876543 35
Q ss_pred cCCchHHHHHHHHHcC-CCCCChH---HHHHHHHHHHHHHHHHH
Q 013892 384 LCSNISGQILASLVMS-PPKVGDE---SYESYCAERDGILSSLA 423 (434)
Q Consensus 384 ~~~~~~~q~~~~~~l~-~~~~~~~---~~~~~~~~r~~l~~~L~ 423 (434)
.+++.++|.++..+++ +..+.++ .++.++++++.+.+.|+
T Consensus 309 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 309 SSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp SSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999999997 6433334 77778888888888776
No 61
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.1e-34 Score=287.57 Aligned_cols=290 Identities=17% Similarity=0.151 Sum_probs=223.4
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|.|..... ....++.+.+++.+.+... ....|++..|..++|+++
T Consensus 26 ~~~i~l~~g~~~~~~~------------------------~~~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~lr~~l 78 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATG------------------------HTPIMRAVHAAEQRMLETE---TTKTYAGLSGEPEFQKAM 78 (394)
T ss_dssp TTCEECCCCSCCCTTS------------------------CCCCCHHHHHHHHHHHHHC---CCCCCCCSSCCHHHHHHH
T ss_pred ccccccccceeeCCCC------------------------CccCcHHHHHHHHHhcCCc---ccCCCCCCCCcHHHHHHH
Confidence 4689999998743111 0124677888887777652 266899989999999999
Q ss_pred HHHHHhhcCCCCCCCCEEE--cCChHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCC
Q 013892 177 AAGIEARDGFPADPNDIFL--TDGASPAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLE 253 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~--t~G~~~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 253 (434)
++++... .+++++|++ |+|+++++..+++.+.. .+||+|+++.|+|+.|...++..|++++.++++.+++|++|
T Consensus 79 a~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 155 (394)
T 2ay1_A 79 GELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVD 155 (394)
T ss_dssp HHHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEEC
T ss_pred HHHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccC
Confidence 9998532 236789999 99999999999988751 38999999999999999999999999999998654567899
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhh
Q 013892 254 TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (434)
Q Consensus 254 ~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l 333 (434)
+++|++++++. ..+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+..++..+. ..
T Consensus 156 ~~~l~~~l~~~---~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~ 231 (394)
T 2ay1_A 156 FEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIA-SR 231 (394)
T ss_dssp HHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHh-hc
Confidence 99999998751 113567777899999999999999999999999999999999999998775310122332221 11
Q ss_pred CCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHH----HHHHhh-cccCCchHHHHHHHHHcCCC-------
Q 013892 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQ----IYKVAS-VNLCSNISGQILASLVMSPP------- 401 (434)
Q Consensus 334 ~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~----l~~~~~-~~~~~~~~~q~~~~~~l~~~------- 401 (434)
. + ++|+++||||.| |++|+|+||+++.+.++++++. +..... .+.+++.++|.++..++++.
T Consensus 232 ~---~--~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~ 305 (394)
T 2ay1_A 232 I---P--EVLIAASCSKNF-GIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWM 305 (394)
T ss_dssp C---S--SEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHH
T ss_pred C---C--CEEEEEeccCCC-cCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHH
Confidence 1 3 379999999999 8899999999753235554443 333333 55567899999988888764
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++.++.+++++++++.+.+.|+++.
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~ 330 (394)
T 2ay1_A 306 AELEAVRSGMLRLREQLAGELRDLS 330 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3466778888999999999888764
No 62
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3.2e-34 Score=290.43 Aligned_cols=258 Identities=21% Similarity=0.350 Sum_probs=213.2
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcC--CCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcCC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHGG 237 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g~ 237 (434)
..|++..|..+||+++++++.+..+ +++++++|++|+|+++++..++.+++ ++||.|+++.|+|..+...+. ..|+
T Consensus 80 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~ 158 (435)
T 3piu_A 80 ALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLA-DPGEAVLIPTPYYPGFDRDLKWRTGV 158 (435)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHC-CTTCEEEEEESCCTTHHHHTTTTTCC
T ss_pred cccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhc-CCCCeEEECCCccccHHHHHHHhcCC
Confidence 5699999999999999999986544 55778999999999999999999998 799999999999999998888 7899
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 013892 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 317 (434)
+++.++++++++|.+|+++|++++++...++.++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.|
T Consensus 159 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~ 238 (435)
T 3piu_A 159 EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAF 238 (435)
T ss_dssp EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 99999998877889999999999998776666899999999999999999999999999999999999999999999988
Q ss_pred CCCCCccchHHHHhhhCCC----CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHH
Q 013892 318 VPEKKFHSFKKVSRSMGYG----EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQIL 393 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~----~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~ 393 (434)
++. .+.++.....+..-. .++ ++++++||||.| |++|+|+||+++ .++++++.+.+... +...+.+.|.+
T Consensus 239 ~~~-~~~~~~~~~~~~~~d~~~~~~~-~~i~i~s~sK~~-g~~G~r~G~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 312 (435)
T 3piu_A 239 SSP-SFISVMEVLKDRNCDENSEVWQ-RVHVVYSLSKDL-GLPGFRVGAIYS--NDDMVVAAATKMSS-FGLVSSQTQHL 312 (435)
T ss_dssp SSS-CCCCHHHHHHC-------CGGG-GEEEEEESSSSS-CCGGGCEEEEEE--SCHHHHHHHHHHGG-GSCCCHHHHHH
T ss_pred CCC-CCcCHHHhccccccccccCCCC-CEEEEEeeeccc-CCCceeEEEEEe--CCHHHHHHHHHHhh-cCCCCHHHHHH
Confidence 775 355665544321100 012 579999999999 899999999976 35778887776554 34678888998
Q ss_pred HHHHcCCCC----CChHHHHHHHHHHHHHHHHHHHH
Q 013892 394 ASLVMSPPK----VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 394 ~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+..++.+.+ ++++.+++++++++.+.+.|++.
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888887643 23455667777777777777654
No 63
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.9e-35 Score=296.50 Aligned_cols=244 Identities=18% Similarity=0.230 Sum_probs=205.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH--HHHHHHHhcC--C----------CCEEEEcCCCC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV--HMMMQLLIRS--E----------NDGILCPIPQY 225 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al--~~~l~~l~~~--~----------gd~Vlv~~p~y 225 (434)
...|++..|.++||+++|+++ ++++++|++|+|+++++ .++++.++ + + ||+|+++.|+|
T Consensus 71 ~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~al~~~~~~~~l~-~~~~g~~~~~~~~~gd~V~v~~p~y 143 (427)
T 3ppl_A 71 VRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDASSLNIMFDVISWSYI-FGNNDSVQPWSKEETVKWICPVPGY 143 (427)
T ss_dssp TTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSCHHHHHHHHHHHHHH-HCCTTCSSCGGGSSCCEEEEEESCC
T ss_pred hcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCcHHHHHHHHHHHHHh-ccCCcccccccCCCCCEEEEcCCCc
Confidence 678999999999999999998 46889999999999999 57888877 5 5 89999999999
Q ss_pred hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHH-HHcC
Q 013892 226 PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFC-KKEG 303 (434)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~-~~~~ 303 (434)
..|...++..|++++.++++++ ++|++.|+++++.. ++++|+++ +||||||.+++.+++++|+++| +++|
T Consensus 144 ~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~ 215 (427)
T 3ppl_A 144 DRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPD 215 (427)
T ss_dssp HHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTT
T ss_pred HHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCC
Confidence 9999999999999999999865 69999999988421 78998877 8899999999999999999999 9999
Q ss_pred CEEEEccCCCCCccCCCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-
Q 013892 304 LVLLADEVYQENVYVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS- 381 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~- 381 (434)
++||+||+|.++.|++.. ++.++..+....+ . .+ ++|+++||||.. ++|+|+||+++ ++++++.+.....
T Consensus 216 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~i~~~S~SK~~--~~G~r~G~~~~---~~~l~~~~~~~~~~ 287 (427)
T 3ppl_A 216 FRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAG-N-PN-RFWAFTSTSKIT--LAGAGVSFFLT---SAENRKWYTGHAGI 287 (427)
T ss_dssp CEEEEECTTTTCBSSSCCCCCCCHHHHHHHTT-C-TT-SEEEEEESTTTS--CTTSSCEEEEC---CHHHHHHHHHHHHH
T ss_pred CEEEEECCCcccccCCCCCCccchhhhhhccC-C-CC-cEEEEechhhcc--CcCccEEEEEc---CHHHHHHHHHHhhc
Confidence 999999999998887643 2335544432111 1 22 589999999974 58999999987 8999999988766
Q ss_pred cccCCchHHHHHHHHHcCC-C---CCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 382 VNLCSNISGQILASLVMSP-P---KVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 382 ~~~~~~~~~q~~~~~~l~~-~---~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
...+++.+.|.++..++++ . +++.+.++.|+++++.+.+.|.+..
T Consensus 288 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l 336 (427)
T 3ppl_A 288 RGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRL 336 (427)
T ss_dssp HCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5678999999999999987 2 3456777888888888888887653
No 64
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.5e-34 Score=291.60 Aligned_cols=279 Identities=15% Similarity=0.182 Sum_probs=219.3
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHH--HHHHcCCCCCCCCC-CCCcchHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAW--QILDQIPGRATGAY-SHSQGIKGLR 173 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~--~~l~~~~~~~~~~Y-~~~~G~~~lr 173 (434)
..+|+++.|.|+..-. ..|+.+.+++. +.+.. +. ....| ++..|.++||
T Consensus 25 ~~~i~l~~g~p~~~~~--------------------------~~~~~v~~a~~~~~~~~~-~~-~~~~Yp~~~~g~~~lr 76 (423)
T 3ez1_A 25 GLNLNMQRGQPADADF--------------------------DLSNGLLTVLGAEDVRMD-GL-DLRNYPGGVAGLPSAR 76 (423)
T ss_dssp TCCEESCCCCCCHHHH--------------------------HTTGGGGGSCCGGGCEET-TE-ETTSSCSCTTCCHHHH
T ss_pred CceEecCCCCCChHhC--------------------------CCcHHHHHHHhhhHHhhc-ch-hhhCCCCCCCChHHHH
Confidence 4689999999983000 12444555543 33331 11 25789 8899999999
Q ss_pred HHHHHHHHhhcCCCCCCCCEEEcCChHHHHH--HHHHHHhcC--C---------CCEEEEcCCCChhHHHHHHHcCCeEE
Q 013892 174 DTIAAGIEARDGFPADPNDIFLTDGASPAVH--MMMQLLIRS--E---------NDGILCPIPQYPLYSASIALHGGTLV 240 (434)
Q Consensus 174 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~--~~l~~l~~~--~---------gd~Vlv~~p~y~~~~~~~~~~g~~~~ 240 (434)
+++|+++ ++++++|++|+|+++++. ++++.++ . + ||+|+++.|+|..|...++..|++++
T Consensus 77 ~~ia~~~------~~~~~~i~~t~G~~~al~~~~~~~~l~-~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 149 (423)
T 3ez1_A 77 ALFAGYL------DVKAENVLVWNNSSLELQGLVLTFALL-HGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELL 149 (423)
T ss_dssp HHHHHHT------TSCGGGEEECSSCHHHHHHHHHHHHHH-TCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEE
T ss_pred HHHHHHh------CCChhhEEEeCCcHHHHHHHHHHHHHh-ccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEE
Confidence 9999997 467889999999999998 8888887 5 6 59999999999999999999999999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEccCCCCCccC
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFC-KKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~-~~~~~~li~Deay~~~~~~ 318 (434)
.++++++ ++|+++|++++++ ..++++|+++ +||||||.+++.+++++|+++| +++|++||+||+|..+.|.
T Consensus 150 ~v~~~~~---g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~ 222 (423)
T 3ez1_A 150 TVDMQSD---GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLV 222 (423)
T ss_dssp EEEEETT---EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCC
T ss_pred eccCCCC---CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcC
Confidence 9999865 6999999999951 1279999866 8999999999999999999999 9999999999999987665
Q ss_pred C-C-CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHH
Q 013892 319 P-E-KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILAS 395 (434)
Q Consensus 319 ~-~-~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~ 395 (434)
+ . .+..++..+....+ . .+ ++|+++||||.+ ++|+|+||+++ ++++++.+..... ...+++.+.|.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~-~-~~-~~i~~~S~sK~~--~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 294 (423)
T 3ez1_A 223 EEDRAEPVNFVVLARDAG-Y-PD-RAFVFASTSKIT--FAGAGLGFVAS---SEDNIRWLSKYLGAQSIGPNKVEQARHV 294 (423)
T ss_dssp SSSCCCCCCHHHHHHHHT-C-TT-SEEEEEESTTTS--CSSSSCEEEEE---CHHHHHHHHHHHHHSCSCCCHHHHHHHH
T ss_pred CCCCCCCcchhhhhhccC-C-CC-eEEEEeCchhhc--cCCcceEEEEe---CHHHHHHHHHHHhhhccCCCHHHHHHHH
Confidence 5 2 23445555432222 1 23 589999999974 48999999988 8999999988776 66789999999998
Q ss_pred HHcCC--C---CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSP--P---KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 396 ~~l~~--~---~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.++++ . +++++.++.|+++++.+.+.|.+.
T Consensus 295 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 329 (423)
T 3ez1_A 295 KFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAE 329 (423)
T ss_dssp HHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88876 2 334556677777777777777664
No 65
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=9.8e-34 Score=279.59 Aligned_cols=232 Identities=22% Similarity=0.346 Sum_probs=196.7
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCe
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGT 238 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~ 238 (434)
...|++. +..++|+++|+++ ++++++|++|+|+++++..++++++ ++| |+|+++.|+|+.|...++..|++
T Consensus 52 ~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~~~~~~~~-~~g~d~Vl~~~p~~~~~~~~~~~~g~~ 123 (356)
T 1fg7_A 52 LNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIELLIRAFC-EPGKDAILYCPPTYGMYSVSAETIGVE 123 (356)
T ss_dssp TTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHC-CTTTCEEEECSSSCTHHHHHHHHHTCE
T ss_pred hccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHHHHHHHHh-CCCCCEEEEeCCChHHHHHHHHHcCCE
Confidence 6679876 4899999999998 3567899999999999999999998 799 99999999999999999999999
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccC
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYV 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~ 318 (434)
++.+++++ +|.+|+++|+++++ ++++|++++||||||.+++.+++++|+++|+ +|+++|+||+|.++...
T Consensus 124 ~~~v~~~~--~~~~d~~~l~~~i~-------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~ 193 (356)
T 1fg7_A 124 CRTVPTLD--NWQLDLQGISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ 193 (356)
T ss_dssp EEECCCCT--TSCCCHHHHHTSCT-------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG
T ss_pred EEEeeCCC--CCCCCHHHHHHHhc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC
Confidence 99998863 57899999988774 4889999999999999999999999999999 99999999999986421
Q ss_pred CCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHc
Q 013892 319 PEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVM 398 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l 398 (434)
.++..+. . .++ ++++++||||.| |++|+|+||+++ ++++++.+......+ +++.++|.++..++
T Consensus 194 -----~~~~~~~---~-~~~--~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~~~~~~-~~~~~~~~a~~~~l 257 (356)
T 1fg7_A 194 -----ASLAGWL---A-EYP--HLAILRTLSKAF-ALAGLRCGFTLA---NEEVINLLMKVIAPY-PLSTPVADIAAQAL 257 (356)
T ss_dssp -----GCSGGGT---T-TCT--TEEEEEESSSTT-CCGGGCCEEEEE---CHHHHHHHHHHSCSS-CSCHHHHHHHHHHT
T ss_pred -----CcHHHHH---h-hCC--CEEEEecchHhh-cCchhhhEEEEe---CHHHHHHHHHhcCCC-CCCHHHHHHHHHHh
Confidence 1211111 1 223 379999999999 899999999987 899999998776544 78899999999999
Q ss_pred CCCCC--ChHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPPKV--GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 399 ~~~~~--~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++..+ .++.++.++++|+.+.+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 286 (356)
T 1fg7_A 258 SPQGIVAMRERVAQIIAEREYLIAALKEI 286 (356)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 76433 6677888888999998888765
No 66
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2.7e-33 Score=276.91 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=211.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+++++.+.+.... ...|++ .|..++|+++++++ |.+ ++++|++|+|+++++..+++.++ ++||+|
T Consensus 43 ~~~~~v~~a~~~~~~~~~---~~~y~~-~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~-~~gd~V 112 (367)
T 3euc_A 43 RLPPALRSELAARLGEVA---LNRYPV-PSSEALRAKLKEVM----QVP-AGMEVLLGNGSDEIISMLALAAA-RPGAKV 112 (367)
T ss_dssp CCCHHHHHHHHHHHHHHH---TTCSCC-CCHHHHHHHHHHHH----TCC-TTCEEEEEEHHHHHHHHHHHHTC-CTTCEE
T ss_pred CCCHHHHHHHHHHhhhhh---hhcCCC-CcHHHHHHHHHHHh----CCC-CcceEEEcCCHHHHHHHHHHHHc-CCCCEE
Confidence 568899999988887421 556866 47999999999998 322 67899999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..+...++..|++++.+++++ +|.+|+++|++++++. ++++|++++||||||.+++.+++++|+++
T Consensus 113 l~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~ 185 (367)
T 3euc_A 113 MAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRA 185 (367)
T ss_dssp EEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHh
Confidence 9999999999999999999999999876 5789999999999875 78999999999999999999999999999
Q ss_pred HHHc--CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 299 CKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 299 ~~~~--~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
|++| |+++|+||+|.++.+.+ ... .+. ..+ .++++.||||. +++|+|+||+++ ++++++.+
T Consensus 186 ~~~~~~~~~li~De~~~~~~~~~---~~~------~~~-~~~--~~i~~~s~sK~--~~~G~r~G~~~~---~~~~~~~~ 248 (367)
T 3euc_A 186 AQGSVCRSLVVVDEAYQPFAQES---WMS------RLT-DFG--NLLVMRTVSKL--GLAGIRLGYVAG---DPQWLEQL 248 (367)
T ss_dssp TBTTSCBCEEEEECTTCCSSSCC---SGG------GGG-TCT--TEEEEEECCCT--TSCSCCEEEEEE---CHHHHHHH
T ss_pred hhhcCCCcEEEEeCcchhhcccc---hHH------HHh-hCC--CEEEEecchhh--cccccCceeeee---CHHHHHHH
Confidence 9999 99999999999965332 111 111 112 47999999997 579999999987 89999888
Q ss_pred HHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 377 YKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 377 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...... .+++.++|.++..+++..+++++.+++++++++.+.+.|+++
T Consensus 249 ~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 296 (367)
T 3euc_A 249 DKVRPP-YNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH 296 (367)
T ss_dssp GGGCCS-SCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHhCCC-CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 766543 468999999999999875556777888888888888888764
No 67
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=3.7e-33 Score=275.89 Aligned_cols=250 Identities=18% Similarity=0.262 Sum_probs=202.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
+.|+.+++++.+.+.. ...|++ .|..++|+++++++ ++++++|++|+|+++++..+++.+ +||+|
T Consensus 37 ~~~~~v~~a~~~~~~~-----~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al~~~~~~~---~gd~v 101 (364)
T 1lc5_A 37 GMPVSVKRALIDNLDC-----IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESIFTVASGL---KPRRA 101 (364)
T ss_dssp CCCHHHHHHHHHTGGG-----GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHH---CCSEE
T ss_pred CCCHHHHHHHHHHHHH-----hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHHHHHHHHc---CCCeE
Confidence 3577888888777654 456865 47999999999998 356789999999999999999988 46999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.+...++..|++++.++++.+++|.+ ++++.+.+++ ++++|++++|+||||.+++.+++++|+++
T Consensus 102 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 174 (364)
T 1lc5_A 102 MIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIADR 174 (364)
T ss_dssp EEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999876444554 4545444432 68899999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE-EecCCHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME-VTGFSAEVREQIY 377 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~-~~~~~~~~~~~l~ 377 (434)
|+++|+++|+||+|.++.+++. +.. .. ++ ..+ .++++.|+||.| |++|+|+||++ . ++++++.+.
T Consensus 175 ~~~~~~~li~De~~~~~~~~~~-~~~---~~---~~-~~~--~~i~~~s~sK~~-~~~G~r~G~~~~~---~~~~~~~l~ 240 (364)
T 1lc5_A 175 CKSLNINLILDEAFIDFIPHET-GFI---PA---LK-DNP--HIWVLRSLTKFY-AIPGLRLGYLVNS---DDAAMARMR 240 (364)
T ss_dssp HHHHTCEEEEECTTGGGSTTCC-CSG---GG---CT-TCT--TEEEEEESTTTT-TCTTTCCEEEECC---CHHHHHHHH
T ss_pred hhhcCcEEEEECcChhhccCcc-chh---hH---hc-cCC--CEEEEEECchhh-cCCccceEEEEEC---CHHHHHHHH
Confidence 9999999999999999776532 111 11 11 122 369999999999 88999999997 6 899999888
Q ss_pred HHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... ..+++.++|.++..+++..+++++.++.++++++.+.+.|+++
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 287 (364)
T 1lc5_A 241 RQQM-PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQL 287 (364)
T ss_dssp HHSC-TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HhCC-CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7654 3478999999999999875556677888888888888888753
No 68
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=2.3e-34 Score=299.45 Aligned_cols=265 Identities=17% Similarity=0.234 Sum_probs=202.7
Q ss_pred ccccccc-CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHH-HhhcCCCC---CCCCEEEcCChHHHHH
Q 013892 130 ILDRSET-QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGI-EARDGFPA---DPNDIFLTDGASPAVH 204 (434)
Q Consensus 130 ~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~-~~~~g~~~---~~~~i~~t~G~~~al~ 204 (434)
+++|+.+ +...++.+++++.+.+. ...|++..|..++|+++++++ .++++..+ ++++|++|+|+++++.
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~ 179 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGIL------GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMA 179 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHH------TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhh------cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHH
Confidence 3444444 22234556666665553 247999999999999987755 55544322 4689999999999999
Q ss_pred HHHHHH-----hcCCCCEEEEcCCCChhHHHHHHH--cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 013892 205 MMMQLL-----IRSENDGILCPIPQYPLYSASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (434)
Q Consensus 205 ~~l~~l-----~~~~gd~Vlv~~p~y~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~ 277 (434)
.+++++ + ++||+|++++|+|+.|...+.. .|+++++++++++++|.+|+++|++.++. ++++|+++
T Consensus 180 ~~~~~l~~~~l~-~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~ 252 (546)
T 2zy4_A 180 YIFESLKLNGLL-KAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCV 252 (546)
T ss_dssp HHHHHHHHTTSS-CTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEE
T ss_pred HHHHHhhhhhcC-CCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEE
Confidence 999884 5 7999999999999999988655 46899999998887899999999887654 79999999
Q ss_pred cCCCCCccCCCHHHHHHHHHHH--HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCC
Q 013892 278 NPGNPTGQVLAEENQRAIVDFC--KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (434)
Q Consensus 278 ~p~NPtG~~~~~~~l~~i~~~~--~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~ 355 (434)
|||||||.+++.+++++|+++| +++|++||+||+|.++.++ +.++.... ++ ++|+++||||.| |+
T Consensus 253 ~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~----~~s~~~~~-------~~-~~i~~~S~SK~~-g~ 319 (546)
T 2zy4_A 253 NPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD----FQSLFAIC-------PE-NTLLVYSFSKYF-GA 319 (546)
T ss_dssp SSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT----CCCHHHHC-------GG-GEEEEEESTTTT-TC
T ss_pred CCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc----CcCHHHhC-------CC-CEEEEEeCcccc-CC
Confidence 9999999999999999999999 7889999999999997653 34443321 12 489999999999 89
Q ss_pred CCceeEEEEEecCCHH-HHHHHHHH-------------h------------------------hcccCCchHHHHHH---
Q 013892 356 CGKRGGYMEVTGFSAE-VREQIYKV-------------A------------------------SVNLCSNISGQILA--- 394 (434)
Q Consensus 356 ~G~R~G~~~~~~~~~~-~~~~l~~~-------------~------------------------~~~~~~~~~~q~~~--- 394 (434)
+|+|+||+++ +++ +++.+.+. . ....+.+.+.|.++
T Consensus 320 ~GlRiG~~~~---~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~ 396 (546)
T 2zy4_A 320 TGWRLGVVAA---HQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALF 396 (546)
T ss_dssp GGGCEEEEEE---ESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHH
T ss_pred CCcceEEEEE---CCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHH
Confidence 9999999987 443 77766321 0 12246778888764
Q ss_pred --HHHcCC-CCCChHHHHHHHHHHHHHHHHHH
Q 013892 395 --SLVMSP-PKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 395 --~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
..++++ ..+.++.++.|+++++.+.+.|.
T Consensus 397 a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~ 428 (546)
T 2zy4_A 397 SLFALMDEADEYKHTLKQLIRRRETTLYRELG 428 (546)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345554 34567778888888888887764
No 69
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=8.9e-33 Score=273.75 Aligned_cols=259 Identities=18% Similarity=0.227 Sum_probs=211.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
+.|+.+++++.+.+.+... ....|++..+ .++++++++++.+++|.++++++|++|+|+++++..++++++ ++||+|
T Consensus 43 ~~~~~v~~a~~~~~~~~~~-~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~-~~gd~V 119 (369)
T 3cq5_A 43 PPSEALVADLVATVDKIAT-ELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFG-GPGRTA 119 (369)
T ss_dssp CCCHHHHHHHHHHHHHHGG-GTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC-STTCEE
T ss_pred CCCHHHHHHHHHHHHhccc-ccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhc-CCCCEE
Confidence 4578899998888865321 2457877766 799999999999988888889999999999999999999998 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.+...++..|++++.++.+ .+|.+|+++|++++++. ++++|++++|+||||.+++.+++.+|++
T Consensus 120 l~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~- 191 (369)
T 3cq5_A 120 LGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIIN- 191 (369)
T ss_dssp EEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHH-
T ss_pred EEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHH-
Confidence 999999999999999999999999965 35789999999999764 6889999999999999999665555555
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
.+++++|+||+|.++.++. +..... + ..++ +++++.||||.| |++|+|+||+++ ++++++.+..
T Consensus 192 --~~~~~li~De~~~~~~~~~-----~~~~~~---~-~~~~-~~i~~~s~sK~~-~~~G~r~G~~~~---~~~~~~~l~~ 255 (369)
T 3cq5_A 192 --VAPGIVIVDEAYAEFSPSP-----SATTLL---E-KYPT-KLVVSRTMSKAF-DFAGGRLGYFVA---NPAFIDAVML 255 (369)
T ss_dssp --HCSSEEEEECTTGGGCCSC-----CGGGGT---T-TCTT-TEEEEEESSSTT-SCGGGCCEEEEE---CTHHHHHHHT
T ss_pred --hCCCEEEEECCchhhcCCc-----chHHHH---h-hCCC-CEEEEEechHhc-CCcccceEEEEe---CHHHHHHHHH
Confidence 5569999999999976531 111111 1 2231 369999999999 789999999987 7888888876
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
....+ +++.+.|.++..++++.+++++.+++++++++.+.+.|++.
T Consensus 256 ~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (369)
T 3cq5_A 256 VRLPY-HLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL 301 (369)
T ss_dssp TSCTT-CSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55433 68899999998888765556778888999999999988763
No 70
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=4.3e-33 Score=276.23 Aligned_cols=237 Identities=19% Similarity=0.317 Sum_probs=202.3
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeE
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL 239 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 239 (434)
...|++..|..+||+++++++. .+++++|++|+|+++++..++.+++ ++||+|+++.|+|..+...++..|+++
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~ 129 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLI-EPGDHVISLYPTYQQLYDIPKSLGAEV 129 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESSCTHHHHHHHHTTCEE
T ss_pred CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhc-CCCCEEEEeCCCchhHHHHHHHcCCEE
Confidence 6689999999999999999872 3678899999999999999999998 799999999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCC
Q 013892 240 VPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVP 319 (434)
Q Consensus 240 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 319 (434)
+.++++.+++|.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++
T Consensus 130 ~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~ 203 (375)
T 3op7_A 130 DLWQIEEENGWLPDLEKLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELD 203 (375)
T ss_dssp EEEEEEGGGTTEECHHHHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSC
T ss_pred EEEeccccCCCCCCHHHHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccC
Confidence 999998777788999999999875 79999999999999999999999999999999999999999999987762
Q ss_pred CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHc
Q 013892 320 EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVM 398 (434)
Q Consensus 320 ~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 398 (434)
..++... . + ++++++||||.+ |++|+|+||+++ ++++++.+..... ...+++.+.|.++...+
T Consensus 204 ---~~~~~~~----~---~--~~i~~~s~sK~~-~~~G~r~G~v~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (375)
T 3op7_A 204 ---VPSIIEV----Y---D--KGIAVNSLSKTY-SLPGIRIGWVAA---NHQVTDILRDYRDYTMICAGVFDDLVAQLAL 267 (375)
T ss_dssp ---CCCHHHH----C---T--TEEEEEESSSSS-SCGGGCCEEEEC---CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHH
T ss_pred ---CCchhhh----c---C--CEEEEeEChhhc-CCcccceEEEEe---CHHHHHHHHHHHhhhccCCCcHHHHHHHHHH
Confidence 3333222 1 2 368999999999 789999999987 9999999987765 45677889998888887
Q ss_pred CCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 399 ~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
+.. +++++.++.++++++.+.+.|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (375)
T 3op7_A 268 AHYQEILERNRHILEENLAILDQWIEE 294 (375)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 653 23445566667777777777765
No 71
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=8e-33 Score=272.51 Aligned_cols=248 Identities=20% Similarity=0.276 Sum_probs=206.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
.+|+.+++++.+.+.. ...|+ ..|..++|+++++++ ++++++|++|+|+++++..++..+ |+|
T Consensus 39 ~~~~~v~~a~~~~~~~-----~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~t~al~~~~~~~-----d~v 101 (361)
T 3ftb_A 39 GIPKSFLNNIDEGIKN-----LGVYP-DVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLF-----EKI 101 (361)
T ss_dssp CSCHHHHTTHHHHHHG-----GGSCC-CTTCHHHHHHHHHHH------TCCSCEEEEESSHHHHHHHHHTTC-----SEE
T ss_pred CCCHHHHHHHHHHHHH-----hcCCC-CccHHHHHHHHHHHh------CCCcceEEEcCCHHHHHHHHHHHc-----CcE
Confidence 4688899999888875 35674 467899999999998 367889999999999999998765 899
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..+...++..|++++.+++++++ ++++++|++++++ +++|++++|+||||.+++.+++++|+++
T Consensus 102 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~ 172 (361)
T 3ftb_A 102 LIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKL 172 (361)
T ss_dssp EEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999998664 4567888887752 7899999999999999999999999999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
|+++|+++|+||+|.++.++ . ..+...... ..+ ++++++|+||.| |++|+|+||+++ .++++++.+..
T Consensus 173 ~~~~~~~li~De~~~~~~~~-~--~~~~~~~~~----~~~--~~i~~~s~sK~~-~~~G~r~g~~~~--~~~~~~~~~~~ 240 (361)
T 3ftb_A 173 AEEKKKTIIIDEAFIEFTGD-P--SSSFVGEIK----NYS--CLFIIRAMTKFF-AMPGIRFGYGIT--NNKEIAAKIKA 240 (361)
T ss_dssp HHHHTCEEEEECSSGGGTCC-T--TSSSGGGTT----TCS--SEEEEEESSSTT-SCGGGCCEEEEE--SCHHHHHHHHT
T ss_pred hhhcCCEEEEECcchhhcCC-c--ccchhHhcc----cCC--CEEEEeeChhhc-CCCCcceeEEEe--CCHHHHHHHHh
Confidence 99999999999999998876 2 222222211 122 479999999999 889999999972 28999999887
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... .+++.++|.++..++++.+++++.+++++++++.+.+.|+++
T Consensus 241 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 286 (361)
T 3ftb_A 241 KQNP-WNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKI 286 (361)
T ss_dssp TSCT-TCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hCCC-CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6544 478999999999999876566778888888888888888764
No 72
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=6.6e-34 Score=295.64 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=209.1
Q ss_pred ccccccc-CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhh-cC-CCCC-CCCEEEcCChHHHHHH
Q 013892 130 ILDRSET-QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEAR-DG-FPAD-PNDIFLTDGASPAVHM 205 (434)
Q Consensus 130 ~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~-~g-~~~~-~~~i~~t~G~~~al~~ 205 (434)
+++++.+ +...|+++++++.+.+.. ...|.+..|.+++|+++++++.++ .+ +.++ +++|++|+|+++++..
T Consensus 105 ~i~l~~g~~~~~~~~~v~a~~~~~~~-----~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~ 179 (533)
T 3f6t_A 105 AVNYCHTELGLNRDKVVAEWVNGAVA-----NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVY 179 (533)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHT-----CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHH
T ss_pred heeccCCCCCcCCcHHHHHHHHHHHh-----CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHH
Confidence 4566655 334567888887777663 222347889999999999999766 34 4555 4799999999999999
Q ss_pred HHHH-----HhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCC--CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 206 MMQL-----LIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDE--ATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 206 ~l~~-----l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
++.. ++ ++||+|+++.|+|..|...++..|++++.++++. +++|++|+++|++++++ ++++|++++
T Consensus 180 ~~~~l~~~~l~-~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~------~~k~v~l~~ 252 (533)
T 3f6t_A 180 AFHSLAENHLL-KKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP------SIKALIVVN 252 (533)
T ss_dssp HHHHHHHTTSS-CTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT------TEEEEEEES
T ss_pred HHHHhhhhhcc-CCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC------CCeEEEEeC
Confidence 9998 56 7999999999999999999999999999999865 56789999999998865 799999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHH-HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC
Q 013892 279 PGNPTGQVLAEENQRAIVDFCK-KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~-~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G 357 (434)
||||||.+++.+++++|+++|+ ++|++||+||+|.++.++ +.++.... ++ ++|+++||||.| |++|
T Consensus 253 p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~----~~~~~~~~-------~~-~~i~~~S~SK~~-g~~G 319 (533)
T 3f6t_A 253 PTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN----FKSIYSVV-------PY-NTMLVYSYSKLF-GCTG 319 (533)
T ss_dssp SCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT----CCCHHHHS-------GG-GEEEEEESHHHH-TCGG
T ss_pred CCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC----ccCHhhcC-------CC-CEEEEecCcccC-CCcc
Confidence 9999999999999999999999 589999999999997764 23333221 12 579999999999 8999
Q ss_pred ceeEEEEEecCCHH-HHHHH------------------------------------HHHhh-cccCCchHHHHH----HH
Q 013892 358 KRGGYMEVTGFSAE-VREQI------------------------------------YKVAS-VNLCSNISGQIL----AS 395 (434)
Q Consensus 358 ~R~G~~~~~~~~~~-~~~~l------------------------------------~~~~~-~~~~~~~~~q~~----~~ 395 (434)
+|+||+++ +++ +++.+ ..... .+.+++.+.|.+ +.
T Consensus 320 ~RiG~l~~---~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~ 396 (533)
T 3f6t_A 320 WRLGVIAL---NEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSM 396 (533)
T ss_dssp GCEEEEEE---ESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHH
T ss_pred cceEEEEE---CcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHH
Confidence 99999987 333 22222 22222 455788888887 44
Q ss_pred HHcC-------CCCCChHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMS-------PPKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 396 ~~l~-------~~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
..+. ..+++++.++.|+++++.+.+.|.
T Consensus 397 ~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~ 431 (533)
T 3f6t_A 397 THLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ 431 (533)
T ss_dssp HHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4554 224467788899999999988884
No 73
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=4.4e-36 Score=299.96 Aligned_cols=278 Identities=19% Similarity=0.264 Sum_probs=229.0
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|++++|+|+. ..|+.+.+++.+.+.. ....|++. ..++|+++
T Consensus 31 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~----~~~~y~~~--~~~l~~~l 75 (392)
T 3b1d_A 31 PQLLPAWIADMDF-----------------------------EVMPEVKQAIHDYAEQ----LVYGYTYA--SDELLQAV 75 (392)
Confidence 3688888888865 3467788888777754 25567765 78999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCC-CCCCCCHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEA-TGWGLETS 255 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~ 255 (434)
++++.+.+|+++++++|++|+|+++++..++++++ ++||+|+++.|+|+.+...++..|++++.++++++ ++|.+|++
T Consensus 76 a~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~ 154 (392)
T 3b1d_A 76 LDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT-KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFE 154 (392)
Confidence 99999888888889999999999999999999998 79999999999999999999999999999998533 35789999
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGY 335 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~ 335 (434)
.|++.+++. ++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.. +.++..+..++
T Consensus 155 ~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~~-- 226 (392)
T 3b1d_A 155 QLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHE-HVSFNTVSPDF-- 226 (392)
Confidence 999998732 6889999999999999999999999999999999999999999998887542 33333322110
Q ss_pred CCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcc--cCCchHHHHHHHHHcCC-CCCChHHHHHHH
Q 013892 336 GEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN--LCSNISGQILASLVMSP-PKVGDESYESYC 412 (434)
Q Consensus 336 ~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~ 412 (434)
.+ ++++++||||.| |++|+|+||+++ .++++++.+.+....+ .+++.+.|.++..++++ .+++++.++.++
T Consensus 227 -~~--~~i~~~s~sK~~-~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 300 (392)
T 3b1d_A 227 -KD--FALVLSSATKTF-NIAGTKNSYAII--ENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLE 300 (392)
Confidence 12 479999999999 889999999976 2345888887766533 36788999988888876 456778889999
Q ss_pred HHHHHHHHHHHH
Q 013892 413 AERDGILSSLAR 424 (434)
Q Consensus 413 ~~r~~l~~~L~~ 424 (434)
++++.+.+.|++
T Consensus 301 ~~~~~l~~~l~~ 312 (392)
T 3b1d_A 301 ENIQFAVEYFAQ 312 (392)
Confidence 999999998887
No 74
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=5e-33 Score=279.51 Aligned_cols=277 Identities=17% Similarity=0.235 Sum_probs=205.1
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCC-CCCCCCCCCcchHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPG-RATGAYSHSQGIKGLRDT 175 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~-~~~~~Y~~~~G~~~lr~~ 175 (434)
+++|+++.|+|.. .|. +.+.+.+++.+.+.+... .....|++..|.+++|++
T Consensus 31 ~~~i~l~~g~p~~---~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ 83 (417)
T 3g7q_A 31 PGAIMLGGGNPAH---IPA------------------------MQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNA 83 (417)
T ss_dssp -CCEECSCCCCCC---CHH------------------------HHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHH
T ss_pred CCceEecCcCCCC---CCh------------------------HHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHH
Confidence 5789999998885 111 012344445555543210 013479999999999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC-----EEEEc-CCCChhHHHHHHHc------CCeEEEEe
Q 013892 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND-----GILCP-IPQYPLYSASIALH------GGTLVPYY 243 (434)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd-----~Vlv~-~p~y~~~~~~~~~~------g~~~~~~~ 243 (434)
+|+++.+++|+++++++|++|+|+++++.++++.++ ++|| +|+++ .|+|+.|...+... +..+..++
T Consensus 84 ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~-~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (417)
T 3g7q_A 84 LAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFA-GRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLP 162 (417)
T ss_dssp HHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS-BC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEG
T ss_pred HHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHc-CCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccC
Confidence 999999999999999999999999999999999998 6887 89997 99999998765432 23344443
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCc
Q 013892 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (434)
Q Consensus 244 ~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 323 (434)
.+. .+|.+|+++|+ +++ ++++|++++||||||.+++.+++++|+++|++||+++|+||+|..+..... +
T Consensus 163 ~~~-~~~~~d~~~l~--~~~------~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~--~ 231 (417)
T 3g7q_A 163 EGQ-FKYHVDFEHLH--IGE------ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGII--F 231 (417)
T ss_dssp GGE-EEEECCGGGCC--CCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCB--C
T ss_pred Ccc-cccccCHHHhc--ccc------CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccc--c
Confidence 321 24678998887 443 799999999999999999999999999999999999999999986321110 1
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCC
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPK 402 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~ 402 (434)
... .. ...+ ++|++.|||| + +++|+|+||+++ ++++++.+..... ...+++.++|.++..++++..
T Consensus 232 ~~~---~~----~~~~-~~i~~~s~sK-~-~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 298 (417)
T 3g7q_A 232 SEA---RP----LWNP-NIILCMSLSK-L-GLPGSRCGIIIA---NDKTITAIANMNGIISLAPGGMGPAMMCEMIKRND 298 (417)
T ss_dssp SCC---CC----CCCT-TEEEEEESGG-G-TCTTSCCEEEEC---CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTC
T ss_pred ccc---cc----CCCC-CEEEEEechh-c-cCCCcceEEEEe---CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcc
Confidence 110 00 1122 4799999999 7 789999999987 9999999988766 566789999999999888754
Q ss_pred CCh---H-HHHHHHHHHHHHHHHHHHH
Q 013892 403 VGD---E-SYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~---~-~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+ + .++.|+++++.+.+.|++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (417)
T 3g7q_A 299 LLRLSETVIKPFYYQRVQQTIAIIRRY 325 (417)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322 2 5667888888888888764
No 75
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=4.6e-33 Score=282.45 Aligned_cols=246 Identities=21% Similarity=0.257 Sum_probs=197.1
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC--------------EEEEc-CCCC
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND--------------GILCP-IPQY 225 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd--------------~Vlv~-~p~y 225 (434)
..|.+..|.+++|+++|+++.+.+|+++++++|++|+|+++++.++++.++ ++|| +|+++ .|+|
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~-~~gd~~~~~~~~~~g~~~~vi~~~~p~~ 155 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFG-GAFVNEHSQDKESKSVDKSILLPLTPEY 155 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSS-EEEECC-------CEEEEEEEESSSSCC
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHh-CCCccccccccccccccceEEEeCCCCc
Confidence 579999999999999999999999999999999999999999999999998 6887 78886 9999
Q ss_pred hhHHHH------HHHcCCeEEEEecCCCC---CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 226 PLYSAS------IALHGGTLVPYYLDEAT---GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 226 ~~~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+.|... +...|..++.+++++++ +|++|+++|+++++.. ..++++|++++||||||.+++.+++++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 232 (444)
T 3if2_A 156 IGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLA 232 (444)
T ss_dssp GGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred cchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHH
Confidence 999763 34568888888887532 4789999999985331 11799999999999999999999999999
Q ss_pred HHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 297 DFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 297 ~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
++|+++|++||+||+|..+..... +... .. ...+ ++|++.||||. +++|+|+||+++ ++++++.+
T Consensus 233 ~~a~~~~~~li~De~~~~~~~~~~--~~~~---~~----~~~~-~~i~~~S~sK~--~~~G~r~G~~~~---~~~l~~~~ 297 (444)
T 3if2_A 233 EIAKRYDIPLIIDNAYGMPFPNII--YSDA---HL----NWDN-NTILCFSLSKI--GLPGMRTGIIVA---DAKVIEAV 297 (444)
T ss_dssp HHHHHTTCCEEEECTTCTTTTCCB--CSCC---CC----CCCT-TEEEEEESTTT--TCGGGCCEEEEC---CHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCcccccc--cccc---cc----cCCC-CEEEEechhhc--cCCCCceEEEEE---CHHHHHHH
Confidence 999999999999999986321110 1110 00 1122 47999999994 579999999987 99999999
Q ss_pred HHHhh-cccCCchHHHHHHHHHcCCCCCC---hH-HHHHHHHHHHHHHHHHHHH
Q 013892 377 YKVAS-VNLCSNISGQILASLVMSPPKVG---DE-SYESYCAERDGILSSLARR 425 (434)
Q Consensus 377 ~~~~~-~~~~~~~~~q~~~~~~l~~~~~~---~~-~~~~~~~~r~~l~~~L~~~ 425 (434)
..... ...+++++.|.++..+++..... .+ .++.|+++++.+.+.|++.
T Consensus 298 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (444)
T 3if2_A 298 SAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQA 351 (444)
T ss_dssp HHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88766 55678999999998888765321 22 5667777888888777764
No 76
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=6.1e-32 Score=263.67 Aligned_cols=241 Identities=17% Similarity=0.209 Sum_probs=194.4
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 138 GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
.++|+.+.+++.+.+.. ...|+ ..|..++|+++++++ ++++++|++|+|+++++..++..+ +||+
T Consensus 28 ~~~~~~v~~a~~~~~~~-----~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~l~~~~~~~---~gd~ 92 (337)
T 3p1t_A 28 EAVEPRVQAAIAAAAAR-----INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDECFDRISAEF---SSMR 92 (337)
T ss_dssp SCCCHHHHHHHHHHGGG-----TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHS---TTSE
T ss_pred CCCCHHHHHHHHHhhhh-----hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHHHHHHHHhc---CCCe
Confidence 36788899888887654 45685 568999999999998 357789999999999999999886 7999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|+++.|+|..+...++..|++++.+++++ +|++|+++|+++ . +++++++++|+||||.+++.+++ .+
T Consensus 93 vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~------~~~~v~i~~p~nptG~~~~~~~l---~~ 159 (337)
T 3p1t_A 93 FVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--S------RDDCVVLANPSNPTGQALSAGEL---DQ 159 (337)
T ss_dssp EEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--C------TTEEEEEESSCTTTCCCCCHHHH---HH
T ss_pred EEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--c------CCCEEEEeCCCCCCCCCCCHHHH---HH
Confidence 99999999999999999999999999874 479999998875 1 67899999999999999996555 45
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|+++++ +|+||+|+++.+.+.. . .. ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.
T Consensus 160 l~~~~~~-~ivDea~~~~~~~~~~---~-------~~--~~~-~~i~~~S~sK~~-g~~G~r~G~~~~---~~~~~~~l~ 221 (337)
T 3p1t_A 160 LRQRAGK-LLIDETYVDYSSFRAR---G-------LA--YGE-NELVFRSFSKSY-GLAGLRLGALFG---PSELIAAMK 221 (337)
T ss_dssp HHHHCSE-EEEECTTGGGSSCSSS---C-------CC--CBT-TEEEEEESSSTT-CCTTTCCEEEEC---CHHHHHHHH
T ss_pred HHHhCCc-EEEECCChhhcccccc---c-------cc--cCC-CEEEEeeCchhc-cCcchheEEEEe---CHHHHHHHH
Confidence 5667776 6669999986543321 1 00 112 478999999999 899999999987 899999887
Q ss_pred HHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+... ..+++.++|.++..++++.+..++.++++.++|+.+.+.|++.
T Consensus 222 ~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 222 RKQW-FCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp TTSC-TTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcC-CCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7543 4478889999999999875445566777778888888888764
No 77
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=9.5e-32 Score=265.32 Aligned_cols=259 Identities=17% Similarity=0.231 Sum_probs=208.0
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI 176 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i 176 (434)
+++|+++.|+|.+ ..|+.+++++.+.+...+. ....|+.. +..++|+++
T Consensus 26 ~~~i~l~~~~~~~-----------------------------~~~~~v~~a~~~~~~~~~~-~~~~y~~~-~~~~lr~~l 74 (360)
T 3hdo_A 26 ASWIKLNTNENPY-----------------------------PPSPEVVKAILEELGPDGA-ALRIYPSA-SSQKLREVA 74 (360)
T ss_dssp TTSEECSSCCCSS-----------------------------CCCHHHHHHHHHHHTTTCG-GGGSCCCS-SCHHHHHHH
T ss_pred cceeeccCCCCCC-----------------------------CCCHHHHHHHHHHHhcccc-hhhcCCCC-chHHHHHHH
Confidence 4688888888765 5688899999888876321 14567654 579999999
Q ss_pred HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHH
Q 013892 177 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSE 256 (434)
Q Consensus 177 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 256 (434)
++++ | +++++|++|+|+++++..++..++ ++||+|+++.|+|..+...++..|++++.++++++ |.+ ++
T Consensus 75 a~~~----g--~~~~~i~~t~g~~~al~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~--~~~--~~ 143 (360)
T 3hdo_A 75 GELY----G--FDPSWIIMANGSDEVLNNLIRAFA-AEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD--FRI--AG 143 (360)
T ss_dssp HHHH----T--CCGGGEEEESSHHHHHHHHHHHHC-CTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTT--SSB--TT
T ss_pred HHHh----C--cCcceEEEcCCHHHHHHHHHHHHh-CCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCC--CCH--HH
Confidence 9998 3 678899999999999999999998 79999999999999999999999999999998653 444 44
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYG 336 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~ 336 (434)
+++.+ +++++++++|+||||.+++. ++|.++|+++|+++|+||+|.++ .+.. ...+ ...
T Consensus 144 l~~~~--------~~~~v~i~~p~nptG~~~~~---~~l~~l~~~~~~~li~De~~~~~--~~~~-~~~~---~~~---- 202 (360)
T 3hdo_A 144 FPERY--------EGKVFFLTTPNAPLGPSFPL---EYIDELARRCAGMLVLDETYAEF--AESN-ALEL---VRR---- 202 (360)
T ss_dssp CCSSB--------CSSEEEEESSCTTTCCCCCH---HHHHHHHHHBSSEEEEECTTGGG--SSCC-CTHH---HHH----
T ss_pred HHhhc--------CCCEEEEeCCCCCCCCCcCH---HHHHHHHHHCCCEEEEECChHhh--CCcc-hhHH---hcc----
Confidence 43221 46799999999999999995 55666778899999999999985 3321 2222 221
Q ss_pred CCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 337 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 337 ~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
.+ +++++.||||.| |++|+|+||+++ ++++++.+...... .+++.++|.++..++++.+++++.+++++++++
T Consensus 203 ~~--~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 275 (360)
T 3hdo_A 203 HE--NVVVTRTLSKSY-SLAGMRIGLAIA---RPEVIAALDKIRDH-YNLDRLAQAACVAALRDQAYLSECCRRIRETRE 275 (360)
T ss_dssp CS--SEEEEEESTTTT-SCTTSCCEEEEC---CHHHHHHHHHHSCS-CCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CC--CEEEEecchHhh-cCCccceeeEee---CHHHHHHHHHhCCC-CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 12 479999999999 889999999987 89999999877654 478999999999998875556788888888999
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|++.
T Consensus 276 ~l~~~L~~~ 284 (360)
T 3hdo_A 276 WFTTELRSI 284 (360)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHC
Confidence 998888765
No 78
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.98 E-value=1.9e-31 Score=261.98 Aligned_cols=238 Identities=18% Similarity=0.216 Sum_probs=193.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+++++.+.+.. ...|++..+ .++|+++|+++ ++++++|++|+|+++++.++++.+. ||+|
T Consensus 28 ~~~~~v~~a~~~~~~~-----~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al~~~~~~l~---gd~V 92 (350)
T 3fkd_A 28 GDKDHLEKHLVENLNC-----IRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAFYQIAQAFR---GSRS 92 (350)
T ss_dssp SCCHHHHHHHHHTGGG-----GGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHHHHHHHHTT---TCEE
T ss_pred CCCHHHHHHHHHhHhH-----HhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHHHHHHHHHC---CCEE
Confidence 4688899888877632 567988876 89999999987 3678899999999999999999884 9999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEec-CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYL-DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
+++.|+|..+...++..|++++.+++ ++++++ ++ + ++++|++++|+||||.+++.+++++|++
T Consensus 93 i~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~--~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~ 156 (350)
T 3fkd_A 93 LIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEA--DF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLN 156 (350)
T ss_dssp EEEESCCHHHHHHHHHTTCEEEEEETTSCGGGS--CC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHHcCCeEEEEecCCccccC--cc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999998 654433 33 2 7899999999999999999999888888
Q ss_pred HHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+|+++ +||+||+|.++.+.+.. .. ..++ ..+ ++|+++||||.| |++|+|+||+++ ++++++.+.
T Consensus 157 ~~~~~--~li~Dea~~~~~~~~~~--~~-----~~~~-~~~--~~i~~~S~sK~~-~~~G~r~G~~~~---~~~~~~~~~ 220 (350)
T 3fkd_A 157 DHPDT--TFVLDQSYVSFTTEEVI--RP-----ADIK-GRK--NLVMVYSFSHAY-GIPGLRIGYIVA---NKDFMKRVA 220 (350)
T ss_dssp HCTTS--EEEEECTTTTSCSSCCC--CG-----GGGT-TCS--SEEEEEESHHHH-SCGGGCCEEEEC---CHHHHHHHH
T ss_pred hCCCC--EEEEECchhhhccCcch--hh-----HHhh-cCC--CEEEEecCchhc-cCcchheEeEEe---CHHHHHHHH
Confidence 88765 99999999998776542 11 1111 112 479999999999 899999999987 999999988
Q ss_pred HHhhcccCCchHHHHHHHHHcCCCC-CChHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVASVNLCSNISGQILASLVMSPPK-VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 378 ~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..... .+++.++|.++..++++.+ +.++..+. .++++.+.+.|+++
T Consensus 221 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~L~~~ 267 (350)
T 3fkd_A 221 AFSTP-WAVNALAIEAAKFILIHPAQFTLPIRKW-QRNTVDFITALNRL 267 (350)
T ss_dssp TTCCT-TCSCHHHHHHHHHHHHCTTTTCCCHHHH-HHHHHHHHHHHHHS
T ss_pred HhCCC-CCCCHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHHHHHHhcC
Confidence 77644 4789999999999888765 44444444 48889999888764
No 79
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.98 E-value=6.6e-32 Score=263.96 Aligned_cols=241 Identities=20% Similarity=0.302 Sum_probs=197.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGI 218 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~V 218 (434)
..|+.+++++.+.+... ....|+.. |..++|+++++++.++ ++++++|++|+|+++++..+++.+ ||+|
T Consensus 32 ~~~~~v~~a~~~~~~~~---~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~~~~~~~----gd~V 100 (335)
T 1uu1_A 32 PFPEDLVDEVFRRLNSD---ALRIYYDS-PDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIYVMMLMF----DRSV 100 (335)
T ss_dssp CCCHHHHHHHHHTCCGG---GGGSCCCS-SCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHHHHHHHS----SEEE
T ss_pred CCCHHHHHHHHHHhhhh---hhhcCCCC-chHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHHHHHHHh----CCcE
Confidence 46888998888776322 25678654 6999999999999543 367889999999999999999886 7999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++ |+|+.+...++..|++++.+++++ +|.+|+++| + ++++|++++||||||.+++.+++++|+++
T Consensus 101 l~~-p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 166 (335)
T 1uu1_A 101 FFP-PTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKT 166 (335)
T ss_dssp ECS-SSCHHHHHHHHHHTCEEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHT
T ss_pred EEC-CCcHHHHHHHHHcCCeEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 999 999999999999999999998863 478888877 2 68999999999999999998888888887
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 378 (434)
| | ++|+||+|.++.+. +... .. + ..+ ++++++||||.| |++|+|+||+++ ++++++.+..
T Consensus 167 ~---~-~li~De~~~~~~~~---~~~~---~~---~-~~~--~~i~~~s~sK~~-g~~G~r~G~~~~---~~~~~~~l~~ 226 (335)
T 1uu1_A 167 G---A-FVALDEAYYEFHGE---SYVD---FL---K-KYE--NLAVIRTFSKAF-SLAAQRVGYVVA---SEKFIDAYNR 226 (335)
T ss_dssp T---C-EEEEECTTHHHHCC---CCGG---GG---G-TCS--SEEEEEESTTTT-TCGGGCCEEEEE---CHHHHHHHHH
T ss_pred C---C-EEEEECcchhhcch---hHHH---Hh---h-hCC--CEEEEecchhhc-CCcccCeEEEEe---CHHHHHHHHH
Confidence 7 7 89999999985432 1221 11 1 112 479999999999 889999999987 8999999887
Q ss_pred HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 379 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.... .+++.++|.++..++++.++.++.+++++++++.+.+.|++.
T Consensus 227 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 227 VRLP-FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp HSCT-TCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCC-CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6644 488999999999999875456778888899999999988875
No 80
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.98 E-value=4.1e-33 Score=278.87 Aligned_cols=224 Identities=16% Similarity=0.207 Sum_probs=182.1
Q ss_pred CCCCCCCcch-----HHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHHHHHHHHHHhcCCCC----EEEEcCCCChhHH
Q 013892 160 TGAYSHSQGI-----KGLRDTIAAGIEARDGFPADP-NDIFLTDGASPAVHMMMQLLIRSEND----GILCPIPQYPLYS 229 (434)
Q Consensus 160 ~~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~al~~~l~~l~~~~gd----~Vlv~~p~y~~~~ 229 (434)
...|++..|. ++||+++|+++. .+|+.+++ ++|++|+|+++++.+++++++ ++|| +|++++|+|+.|.
T Consensus 56 ~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-~~Gd~~~~~Vlv~~P~y~~~~ 133 (391)
T 3bwn_A 56 MSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALS-SLARSQPVSVVAAAPFYSTYV 133 (391)
T ss_dssp CSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHH-HTSSSSSEEEEECSSCCTHHH
T ss_pred hhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhc-CCCCCCcceEEEcCCCchhHH
Confidence 6789999998 999999999998 56888877 599999999999999999998 7999 9999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
..++..|++++.++++.+ +++ .+ ++++|++++||||||.+++ +|++.+++++++||+|
T Consensus 134 ~~~~~~g~~~~~~~~d~~---~l~--------~~------~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~D 191 (391)
T 3bwn_A 134 EETTYVRSGMYKWEGDAW---GFD--------KK------GPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHD 191 (391)
T ss_dssp HHHHTTCBTTEEEEEEST---TCC--------CC------SCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEE
T ss_pred HHHHHcCCeEEEecCCHH---HcC--------CC------CCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEe
Confidence 999999999999988754 333 11 7899999999999999997 3544222334999999
Q ss_pred cCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCch
Q 013892 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNI 388 (434)
Q Consensus 310 eay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~ 388 (434)
|+|.+ +. +.++.. . .+ ++|+++||||.| |++|+|+||+++ .++++++.+.+... ...+++.
T Consensus 192 e~y~~----~~--~~~l~~-------~-~~-~~i~~~S~SK~~-g~~GlRiG~~~~--~~~~l~~~l~~~~~~~~~~~~~ 253 (391)
T 3bwn_A 192 FAYYW----PH--YTPITR-------R-QD-HDIMLFTFSKIT-GHAGSRIGWALV--KDKEVAKKMVEYIIVNSIGVSK 253 (391)
T ss_dssp CTTCS----TT--TSCCCC-------C-BC-CSEEEEEHHHHH-SCGGGCEEEEEE--CCHHHHHHHHHHHHHHHSSCCH
T ss_pred CCCCC----CC--CCcccc-------C-CC-CeEEEEechhhc-CCCccceEEEEe--cCHHHHHHHHHHhcccccCCCH
Confidence 99973 11 112110 1 12 479999999999 899999999974 37899999988776 4568999
Q ss_pred HHHHHHHHHcCC-----------CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 389 SGQILASLVMSP-----------PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 389 ~~q~~~~~~l~~-----------~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++|.++..++++ .+++++.++.++++|+.+.+.|++.
T Consensus 254 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (391)
T 3bwn_A 254 ESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKES 301 (391)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999888875 3557788999999999999998864
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.97 E-value=3.1e-31 Score=268.29 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=187.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCc-c---hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH------
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQ-G---IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL------ 210 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~-G---~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l------ 210 (434)
|+.+.+++.+.+...+. ....|++.. | .++||+++|+|+.++.+..+++++|++|+|+++++.+++.+|
T Consensus 71 ~~~v~~a~~~~l~~~~~-~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~ 149 (427)
T 2hox_A 71 EYWKQHKEASAVLVSPW-HRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTA 149 (427)
T ss_dssp HHHTTSHHHHCEEECTT-TTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTT
T ss_pred CHHHHHhHHhhhhcCCc-ccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhcccc
Confidence 34455555555532221 134599988 9 999999999999987777788999999999999999999999
Q ss_pred --hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCC
Q 013892 211 --IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (434)
Q Consensus 211 --~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~ 288 (434)
+ ++||.|+++.|+|+.|...++..|++++.+ .+|++.|++++++ ++++|+++|||||||.+++
T Consensus 150 ~~~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~ 214 (427)
T 2hox_A 150 TPD-APESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH 214 (427)
T ss_dssp CTT-SCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC
T ss_pred ccC-CCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcC------CceEEEEcCCCCCcccccH
Confidence 7 799999999999999999999999987743 4567777777655 6899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
+.+ + ++.++.|++|. ++ +.++..+ . .+ ++|+++||||.| |++|+|+||+++ .
T Consensus 215 -~~l-------~--~~~~i~d~~~~----~~---~~s~~~~----~---~~-~~i~~~S~SK~~-g~~G~RiG~~~~--~ 266 (427)
T 2hox_A 215 -AVI-------K--GCKSIYDMVYY----WP---HYTPIKY----K---AD-EDILLFTMSKFT-GHSGSRFGWALI--K 266 (427)
T ss_dssp -CSS-------T--TCEEEEECTTC----ST---TTSCCCS----C---BC-CSEEEEEHHHHT-SCGGGCCEEEEE--C
T ss_pred -HHH-------c--CCCEEEeeccc----CC---CCCcccc----C---CC-ceEEEEeChhcC-CCCCceEEEEEE--C
Confidence 422 2 56677777764 21 2222211 1 12 469999999999 899999999986 3
Q ss_pred CHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC------------CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 369 SAEVREQIYKVAS-VNLCSNISGQILASLVMSPP------------KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 369 ~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~------------~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++++.+... ...+++.+.|.++..+|++. +++++.++.++++++.+.+.|++.
T Consensus 267 ~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 336 (427)
T 2hox_A 267 DESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQS 336 (427)
T ss_dssp CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5899999988876 45688999999988888652 334567788888888888888764
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.96 E-value=1.8e-28 Score=244.97 Aligned_cols=265 Identities=13% Similarity=0.080 Sum_probs=204.8
Q ss_pred Cccccccc-C-C-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHH
Q 013892 129 SILDRSET-Q-G-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHM 205 (434)
Q Consensus 129 ~~l~~~~~-~-~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 205 (434)
.++||+.+ + . ..|+.+.+++.+.+..... ....|.+..|..++++++++++.+.+|. +++++|+|+++++..
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEKYGT-GCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQSNLG 118 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHHHCS-CCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHHHHHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHHcCC-CCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHHHHHH
Confidence 35555555 2 1 2678899998888865432 2456777788889999999999888773 589999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 206 MMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 206 ~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
+++.++ ++||.|+++.|+|+.+...++..|++++.+++ +|+++|++.+++... .++++|++++|+||||.
T Consensus 119 ~~~~~~-~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~ 188 (398)
T 3a2b_A 119 PLSCLM-GRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGD 188 (398)
T ss_dssp HHHHSS-CTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCC
T ss_pred HHHHHh-CCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCC
Confidence 999998 79999999999999999999999999999885 478999998875211 15889999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|+++|+++|+++|+||+|..+.|+.. ..++.... .+. ++ ..++++||||.| |++| ||+++
T Consensus 189 ~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~---~~-~di~~~s~sK~~-~~~G---G~~~~ 254 (398)
T 3a2b_A 189 IVN---LPELTSIANEFDAAVMVDDAHSLGVIGHK--GAGTASHF-GLN---DD-VDLIMGTFSKSL-ASLG---GFVAG 254 (398)
T ss_dssp BCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG--GCCHHHHH-TCG---GG-CSEEEEESSSTT-CSSC---EEEEE
T ss_pred ccC---HHHHHHHHHHcCcEEEEECCCcccccCCC--CCchHhhc-CCC---cC-CeEEEecccccc-cCCC---cEEEe
Confidence 998 89999999999999999999998877532 22332221 111 11 138999999999 6778 99987
Q ss_pred ecCCHHHHHHHHHHh-h-cccCCchHHHH-HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVA-S-VNLCSNISGQI-LASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~-~-~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+.... . ...+++.+.|. ++..+++..++.++.+++++++++.+.+.|++.
T Consensus 255 ---~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 255 ---DADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp ---CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc
Confidence 899999987752 2 34445555565 445666544446688899999999999999875
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.95 E-value=3.7e-27 Score=236.64 Aligned_cols=217 Identities=15% Similarity=0.118 Sum_probs=175.2
Q ss_pred CCCCCCCcchH---HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HH
Q 013892 160 TGAYSHSQGIK---GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SI 232 (434)
Q Consensus 160 ~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~ 232 (434)
...|+. .|.+ ++++++++++ | .+++++++|+++++..++.+++ ++||+|+++.|+|+.+.. .+
T Consensus 53 ~~~Y~~-~~~~~~~~l~~~ia~~~----g----~~~~i~~~~g~~ai~~~~~~l~-~~gd~Vl~~~~~y~~~~~~~~~~~ 122 (404)
T 1e5e_A 53 GYIYTR-LGNPTVSNLEGKIAFLE----K----TEACVATSSGMGAIAATVLTIL-KAGDHLISDECLYGCTHALFEHAL 122 (404)
T ss_dssp SCCBTT-TCCHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHH
T ss_pred CccccC-CcChHHHHHHHHHHHHh----C----CCcEEEeCChHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHHH
Confidence 566877 5666 8999999987 3 1367888888899999999988 799999999999999888 78
Q ss_pred HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEccC
Q 013892 233 ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEV 311 (434)
Q Consensus 233 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Dea 311 (434)
+..|++++.++++ |+++|++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+||+
T Consensus 123 ~~~g~~~~~v~~~-------d~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De~ 186 (404)
T 1e5e_A 123 TKFGIQVDFINTA-------IPGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNT 186 (404)
T ss_dssp HHTTCEEEEECTT-------STTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECT
T ss_pred HHcCCEEEEECCC-------CHHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEECC
Confidence 8899999999864 67889888875 7999999999999999998 9999999999 9999999999
Q ss_pred CCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHH-HHHHHhhc--ccCCc
Q 013892 312 YQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVASV--NLCSN 387 (434)
Q Consensus 312 y~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~-~l~~~~~~--~~~~~ 387 (434)
|.++.+.. +. .++ ..|+++|+||.| |++|+|+ ||+++ ++++++ .+...... ..+.+
T Consensus 187 ~~~~~~~~--~~--------~~~------~di~~~S~sK~~-~~~g~ri~G~~~~---~~~~~~~~l~~~~~~~~g~~~~ 246 (404)
T 1e5e_A 187 FCSPMITN--PV--------DFG------VDVVVHSATKYI-NGHTDVVAGLICG---KADLLQQIRMVGIKDITGSVIS 246 (404)
T ss_dssp TTCTTTCC--GG--------GGT------CSEEEEETTTTT-TCSSCCCCEEEEE---CHHHHHHHHHTCCCCCCCCCCC
T ss_pred CchhhhCC--cc--------ccC------CEEEEEcCcccc-CCCCCCeEEEEEE---CHHHHHHHHHHHHHhCCCCCCC
Confidence 99976541 11 111 248899999999 7899997 99987 888887 77766553 45688
Q ss_pred hHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 388 ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 388 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.|+++...++. +....+...++.+.+.+.|+++
T Consensus 247 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~l~~~ 281 (404)
T 1e5e_A 247 PHDAWLITRGLST---LNIRMKAESENAMKVAEYLKSH 281 (404)
T ss_dssp HHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhHhH---HHHHHHHHHHHHHHHHHHHHhC
Confidence 8899988888864 2345556666777777666654
No 84
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=1.7e-26 Score=230.22 Aligned_cols=266 Identities=13% Similarity=0.093 Sum_probs=198.0
Q ss_pred CCccccccc-CC--CCCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 128 PSILDRSET-QG--LFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 128 p~~l~~~~~-~~--~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
..++||+.+ +. ..++.+.+++.+.+...... ....|+...+..++++.+++++ | . ++.|++++| ++
T Consensus 43 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~--~-~~~i~~~sG-t~ 114 (399)
T 3tqx_A 43 KEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL----G--T-DDTILYSSC-FD 114 (399)
T ss_dssp EEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH----T--C-SEEEEESCH-HH
T ss_pred eeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH----C--C-CcEEEECch-HH
Confidence 345666666 32 34788999988888763210 1122444556788888888887 3 2 246666665 67
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC
Q 013892 202 AVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (434)
Q Consensus 202 al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N 281 (434)
++..++..++ ++||.|+++.|+|+.+...++..|++++.++. +|+++|++.+++...++.++++|++++|+|
T Consensus 115 a~~~~l~~~~-~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n 186 (399)
T 3tqx_A 115 ANGGLFETLL-GPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFS 186 (399)
T ss_dssp HHHTTHHHHC-CTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEET
T ss_pred HHHHHHHHhc-CCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCC
Confidence 9999999988 79999999999999999999999999999885 367899999988665555799999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE
Q 013892 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (434)
Q Consensus 282 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G 361 (434)
|||.+++ +++|+++|+++|+++|+||+|....++.. ..+..... .+. ... .++++||||.| | |.++|
T Consensus 187 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~-~~~---di~~~s~sK~~-~--g~~gG 253 (399)
T 3tqx_A 187 MDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGEN--GRGTPEYC-GVA-DRV---DILTGTLGKAL-G--GASGG 253 (399)
T ss_dssp TTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT--SCCHHHHH-TCT-TCC---SEEEEESSSSS-C--SSCCE
T ss_pred CCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC--CCchHHhh-CCC-CCC---cEEEecchHhc-c--cCceE
Confidence 9999999 89999999999999999999974434433 22222221 111 112 38899999998 4 56669
Q ss_pred EEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 362 YMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|+++ ++++++.+..... .....+.+.+.++...++.. ++.++.+++++++++.+.+.|++.
T Consensus 254 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (399)
T 3tqx_A 254 YTSG---HKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL 318 (399)
T ss_dssp EEEE---CHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEc---CHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 9987 8999999887533 23356667666666666543 456788889999999999999876
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.7e-27 Score=237.24 Aligned_cols=258 Identities=14% Similarity=0.081 Sum_probs=200.2
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHHHH
Q 013892 126 DHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPAVH 204 (434)
Q Consensus 126 ~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~al~ 204 (434)
..|..+.++.++...|+.+++++.+.+. ..|++ ...++++++++++.+.+|. +++ +|++|+|+++++.
T Consensus 31 ~~~~~~l~~~~~~~~~~~v~~a~~~~~~-------~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~ 99 (393)
T 1vjo_A 31 EVPSRLLLGPGPSNAHPSVLQAMNVSPV-------GHLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAME 99 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHHSSCCC-------CTTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHH
T ss_pred CCccceeccCCCCCCCHHHHHHHhcccc-------cccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHH
Confidence 3344444555677788888877654322 14543 2568888899888888774 567 8999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 205 MMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 205 ~~l~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
.++..++ ++||+|+++.|+|+. +...++..|++++.++++. ++.+|+++|++++++. ++++|++++|+||
T Consensus 100 ~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~np 171 (393)
T 1vjo_A 100 ATIANAV-EPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETH-----RPAILALVHAETS 171 (393)
T ss_dssp HHHHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETT
T ss_pred HHHHhcc-CCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCC
Confidence 9999998 799999999999999 9999999999999999875 4679999999999864 5889999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.+++ +++|+++|+++|+++|+||+|. ++.. + ..+ ..... .+++.|+||.| +.+| |+||
T Consensus 172 tG~~~~---l~~i~~l~~~~~~~li~Dea~~---~g~~-~-~~~-------~~~~~---di~~~s~sK~l-~~~~-~~G~ 231 (393)
T 1vjo_A 172 TGARQP---LEGVGELCREFGTLLLVDTVTS---LGGV-P-IFL-------DAWGV---DLAYSCSQKGL-GCSP-GASP 231 (393)
T ss_dssp TTEECC---CTTHHHHHHHHTCEEEEECTTT---TTTS-C-CCT-------TTTTC---SEEECCSSSTT-CSCS-SCEE
T ss_pred cceecc---HHHHHHHHHHcCCEEEEECCcc---ccCc-C-Ccc-------cccCc---cEEEEcCcccc-cCCC-ceEE
Confidence 999998 8899999999999999999999 2221 1 111 11112 37899999999 5567 9999
Q ss_pred EEEecCCHHHHHHHHHH----h----------------hccc-CCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKV----A----------------SVNL-CSNISGQILASLVMSPP--KVGDESYESYCAERDGIL 419 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~----~----------------~~~~-~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~ 419 (434)
+++ ++++++.+... . .... +++.+.|.++..+++.. ..+++.+++++++++.+.
T Consensus 232 l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 308 (393)
T 1vjo_A 232 FTM---SSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLW 308 (393)
T ss_dssp EEE---CHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEE---CHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 988 88888887532 0 1122 67888888887777642 235677888899999999
Q ss_pred HHHHHH
Q 013892 420 SSLARR 425 (434)
Q Consensus 420 ~~L~~~ 425 (434)
+.|++.
T Consensus 309 ~~L~~~ 314 (393)
T 1vjo_A 309 ERLEDI 314 (393)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 988774
No 86
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=6.5e-27 Score=234.61 Aligned_cols=249 Identities=15% Similarity=0.139 Sum_probs=187.9
Q ss_pred CCCHHHHHHHHHHHHcCCCC---CCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---
Q 013892 139 LFSADSIERAWQILDQIPGR---ATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--- 210 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~---~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--- 210 (434)
..|+.+++++.+.+...... +...|++ ..|..++++++++++ |.. ++++|++|+|+++++..++..+
T Consensus 39 ~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~g~t~a~~~~~~~~~~~ 113 (420)
T 1t3i_A 39 QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI----NAR-SPREIVYTRNATEAINLVAYSWGMN 113 (420)
T ss_dssp CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT----TCS-CGGGEEEESSHHHHHHHHHHHTHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc----CCC-CCCeEEEcCChHHHHHHHHHHhhhc
Confidence 46888999998888763210 1234554 467889999999987 311 5689999999999999999998
Q ss_pred -hcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 211 -IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 211 -~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
+ ++||+|+++.|+|+. +...++..|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.
T Consensus 114 ~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~ 184 (420)
T 1t3i_A 114 NL-KAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSE------KTKLVTVVHISNTLGC 184 (420)
T ss_dssp HC-CTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCT------TEEEEEEESBCTTTCB
T ss_pred cc-CCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC--CCCcCHHHHHHhhCC------CceEEEEeCCcccccC
Confidence 7 799999999999998 6677788999999999873 467999999999876 7999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|.++|+++|+++|+||+|..+... ..+. .++ .+ +++.|+||.+ |.+| +||+++
T Consensus 185 ~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~-----~~~~----~~~---~d---i~~~s~sK~~-~~~g--~G~~~~ 243 (420)
T 1t3i_A 185 VNP---AEEIAQLAHQAGAKVLVDACQSAPHYP-----LDVQ----LID---CD---WLVASGHKMC-APTG--IGFLYG 243 (420)
T ss_dssp BCC---HHHHHHHHHHTTCEEEEECTTTTTTSC-----CCHH----HHT---CS---EEEEEGGGTT-SCTT--CEEEEE
T ss_pred cCC---HHHHHHHHHHcCCEEEEEhhhccCCcc-----Cchh----hcC---CC---EEEEehhhhc-CCCc--eEEEEE
Confidence 999 899999999999999999999864321 1222 122 23 7889999977 7677 999987
Q ss_pred ecCCHHHHHHHHHHhhc---------------------ccCCchHHHHHHHH-HcCCC--CCChHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVASV---------------------NLCSNISGQILASL-VMSPP--KVGDESYESYCAERDGILSS 421 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~~~---------------------~~~~~~~~q~~~~~-~l~~~--~~~~~~~~~~~~~r~~l~~~ 421 (434)
++++++.+...... ..+.+.+.+.++.. .++.. ..+++..++++++++.+.+.
T Consensus 244 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (420)
T 1t3i_A 244 ---KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQG 320 (420)
T ss_dssp ---CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ---chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 88888877554321 12355556655332 23211 12356677778888888888
Q ss_pred HHHH
Q 013892 422 LARR 425 (434)
Q Consensus 422 L~~~ 425 (434)
|++.
T Consensus 321 L~~~ 324 (420)
T 1t3i_A 321 LGQI 324 (420)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 7653
No 87
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.95 E-value=1.7e-26 Score=230.79 Aligned_cols=266 Identities=15% Similarity=0.114 Sum_probs=198.2
Q ss_pred CCCccccccc-CCC--CCHHHHHHHHHHHHcCCCC-CCCCCC--CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 127 HPSILDRSET-QGL--FSADSIERAWQILDQIPGR-ATGAYS--HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 127 ~p~~l~~~~~-~~~--~p~~v~~~~~~~l~~~~~~-~~~~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
...++||+.+ +.+ .|+.+++++.+.+...+.. ....|. ...+..++++++++++ | ++ ++|++++| +
T Consensus 44 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g--~~-~~i~~~sG-s 115 (401)
T 1fc4_A 44 GSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----G--ME-DAILYSSC-F 115 (401)
T ss_dssp SCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----T--CS-EEEEESCH-H
T ss_pred CccEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----C--CC-cEEEeCCh-H
Confidence 3456787776 444 4899999998888753210 011232 2567889999999998 3 33 56666666 6
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 201 PAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 201 ~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+++..+++.++ ++||.|+++.|+|+.+...++..|++++.++. .|+++|++.+++...++.++++|++++|+
T Consensus 116 ~a~~~~~~~~~-~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~ 187 (401)
T 1fc4_A 116 DANGGLFETLL-GAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVF 187 (401)
T ss_dssp HHHHTTHHHHC-CTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEE
T ss_pred HHHHHHHHHHc-CCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCc
Confidence 78888889888 79999999999999998899999999998872 47899999998754444468899999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
||||.+++ +++|.++|+++|+++|+||+|. ++.+.....+. .. .++. ++ ..|++.||||.|.|.+
T Consensus 188 nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~---~~-~~~~---~~-~di~~~s~sK~~~~~~--- 253 (401)
T 1fc4_A 188 SMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSH---EY-CDVM---GR-VDIITGTLGKALGGAS--- 253 (401)
T ss_dssp TTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHH---HH-TTCT---TC-CSEEEEESSSTTCSSS---
T ss_pred CCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccH---HH-cCCC---cC-CcEEEecchhhccCCC---
Confidence 99999999 8999999999999999999996 76532221111 11 1111 22 2388999999984433
Q ss_pred eEEEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+||+++ ++++++.+..... ...+++.+.+.++...++..+..++.+++++++++.+.+.|++.
T Consensus 254 gG~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 254 GGYTAA---RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp CEEEEE---CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEc---CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 499987 8999998877542 24477888888887777543335678889999999999988875
No 88
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.95 E-value=2.1e-26 Score=228.26 Aligned_cols=250 Identities=12% Similarity=0.068 Sum_probs=193.3
Q ss_pred cCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC
Q 013892 136 TQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN 215 (434)
Q Consensus 136 ~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g 215 (434)
++...|+.+++++.+.+ ...|++. ..++++++++++.+.+|.+ +++++++|+|+++++..++.+++ ++|
T Consensus 27 ~~~~~~~~v~~a~~~~~-------~~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~-~~g 95 (386)
T 2dr1_A 27 GPVACFPEVLEIMKVQM-------FSHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGV-SKG 95 (386)
T ss_dssp SSCCCCHHHHHHTTSCC-------CCTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHS-CTT
T ss_pred CCcCCcHHHHHHHhccc-------ccccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhh-cCC
Confidence 35567787777654322 1245432 4788899999998888865 46789999999999999999988 799
Q ss_pred CEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHH
Q 013892 216 DGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (434)
Q Consensus 216 d~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~ 293 (434)
|+|+++.|+|+. +...++..|++++.++++. ++.+|+++|++++++ +.++++|++++|+||||.+.+ ++
T Consensus 96 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~ 166 (386)
T 2dr1_A 96 GKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LP 166 (386)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HH
Confidence 999999999998 8888999999999999875 467999999999964 126899999999999999988 89
Q ss_pred HHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHH
Q 013892 294 AIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 294 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 373 (434)
+|.++|+++|+++|+||+|..+.+. .++ ..++ . .+++.|+||.| +.+ .++||+++ +++++
T Consensus 167 ~i~~l~~~~~~~li~D~a~~~~~~~-----~~~----~~~~---~---di~~~s~sK~~-~~~-~g~G~~~~---~~~~~ 226 (386)
T 2dr1_A 167 ELAKVAKEHDKLVFVDAVSAMGGAD-----IKF----DKWG---L---DVVFSSSQKAF-GVP-PGLAIGAF---SERFL 226 (386)
T ss_dssp HHHHHHHHTTCEEEEECTTTBTTBC-----CCT----TTTT---C---SEEEEETTSTT-CCC-SSCEEEEE---CHHHH
T ss_pred HHHHHHHHcCCeEEEEccccccCcc-----ccc----cccC---C---cEEEEeccccc-cCC-CceEEEEE---CHHHH
Confidence 9999999999999999999975432 111 1111 2 38899999999 444 24899987 88888
Q ss_pred HHHH----------------HHh---hcccCCchHHHHHHHHHcCCC-C--CChHHHHHHHHHHHHHHHHHHHH
Q 013892 374 EQIY----------------KVA---SVNLCSNISGQILASLVMSPP-K--VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 374 ~~l~----------------~~~---~~~~~~~~~~q~~~~~~l~~~-~--~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+. ... ....+++.+.|.++..+++.. + .+++.+++++++++.+.+.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 227 EIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI 300 (386)
T ss_dssp HHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7762 221 234467888888887777542 1 24677888888899998888775
No 89
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=8.5e-26 Score=224.36 Aligned_cols=260 Identities=13% Similarity=0.093 Sum_probs=192.3
Q ss_pred CCcccccccC--C-CCCHHHHHHHHHHHHcCCC-CCC--CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 128 PSILDRSETQ--G-LFSADSIERAWQILDQIPG-RAT--GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 128 p~~l~~~~~~--~-~~p~~v~~~~~~~l~~~~~-~~~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
+.++||+.+. . ..|+.+.+++.+.+..... ... ..|+...+..++++++++++ | ++ +.|++++| ++
T Consensus 39 ~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g--~~-~~i~~~sG-t~ 110 (384)
T 1bs0_A 39 RQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----G--YS-RALLFISG-FA 110 (384)
T ss_dssp EEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----T--CS-EEEEESCH-HH
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----C--CC-cEEEeCCc-HH
Confidence 3466776652 2 4678899999888876221 011 22355678899999999998 3 22 45666666 89
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC
Q 013892 202 AVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (434)
Q Consensus 202 al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N 281 (434)
++..+++.++ ++||.|+++.|+|+.+...++..|++++.++. .|+++|++.+++. ..++++|++++|+|
T Consensus 111 a~~~~~~~~~-~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~---~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 111 ANQAVIAAMM-AKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASP---CPGQQMVVTEGVFS 179 (384)
T ss_dssp HHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSC---CSSCEEEEEESBCT
T ss_pred HHHHHHHHhC-CCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhc---CCCCeEEEEeCCCC
Confidence 9999999988 79999999999999999999999999999873 4789999888652 11367888889999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE
Q 013892 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (434)
Q Consensus 282 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G 361 (434)
|||.+++ +++|.++|+++|+++|+||+|..+.++... ..+. ..++ ..+| ++++||||.| |++| |
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~--~~~~---~~~~-~~~d---i~~~s~sK~~-~~~G---G 243 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQG--RGSC---WLQK-VKPE---LLVVTFGKGF-GVSG---A 243 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGG--CCHH---HHTT-CCCS---EEEEESSSTT-SSCC---E
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCC--CchH---HhcC-CCCc---EEEeeccchh-hccC---c
Confidence 9999999 889999999999999999999886654211 1111 1222 1234 8899999999 6566 9
Q ss_pred EEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCCC--CChHHHHHHHHHHHHHHHHHHHH
Q 013892 362 YMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPPK--VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|+++ ++++++.+..... ...+++.+.+.++...++..+ +.++.+++++++++.+.+.|++.
T Consensus 244 ~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (384)
T 1bs0_A 244 AVLC---SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL 309 (384)
T ss_dssp EEEE---CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEe---CHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 9987 8999998877532 223578888877766665432 34567778888888888887654
No 90
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=5.1e-27 Score=233.04 Aligned_cols=251 Identities=18% Similarity=0.170 Sum_probs=187.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCC---CCCCC-CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcC
Q 013892 139 LFSADSIERAWQILDQIPGRAT---GAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRS 213 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~---~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~ 213 (434)
..|+.+++++.+.+........ ..|+. ..+..++++++++++ | +++++|++|+|+++++..+++.+ + +
T Consensus 27 ~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~~~~~~~-~ 99 (390)
T 1elu_A 27 ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----N--VDPNTITITDNVTTGCDIVLWGLDW-H 99 (390)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----T--SCGGGEEEESSHHHHHHHHHHHSCC-C
T ss_pred CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----C--CCHHHEEEeCChHHHHHHHHhCCCC-C
Confidence 4577899998887765210001 14544 367889999999986 3 56779999999999999999998 6 6
Q ss_pred CCCEEEEcCCCChhHHHH----HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 214 ENDGILCPIPQYPLYSAS----IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
+||+|+++.|+|+.+... ++..|++++.++++.+.++.+|++.|++++++ ++++|++++|+||||.+++
T Consensus 100 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~- 172 (390)
T 1elu_A 100 QGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP------KTRLVILSHLLWNTGQVLP- 172 (390)
T ss_dssp TTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT------TEEEEEEESBCTTTCCBCC-
T ss_pred CCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC------CceEEEEeccccCCceecC-
Confidence 999999999999997654 46679999999987444678999999998875 7999999999999999999
Q ss_pred HHHHHHHHHHH----HcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 290 ENQRAIVDFCK----KEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 290 ~~l~~i~~~~~----~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++|.++|+ ++|+++|+||+|..... + .. +.....+ +++.|+||.+. .|.++||+++
T Consensus 173 --~~~i~~l~~~~~~~~~~~li~Dea~~~g~~----~-~~-------~~~~~~d---~~~~s~~K~~~--~~~g~G~~~~ 233 (390)
T 1elu_A 173 --LAEIMAVCRRHQGNYPVRVLVDGAQSAGSL----P-LD-------FSRLEVD---YYAFTGHKWFA--GPAGVGGLYI 233 (390)
T ss_dssp --HHHHHHHHHHCCSSSCCEEEEECTTTBTTB----C-CC-------TTTSCCS---EEEEESSSTTC--CCTTCEEEEE
T ss_pred --HHHHHHHHhhhhhhcCcEEEEEcccccCCc----C-CC-------hhhcCCC---EEEcccccccc--CCCceEEEEE
Confidence 889999999 99999999999984211 1 11 1111123 78999999543 4667999987
Q ss_pred ecCCHHHHHHHHHHh----------------------h-cccCCchHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVA----------------------S-VNLCSNISGQILASLVMS---PPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~----------------------~-~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~ 419 (434)
++++++.+.... . ...+++...+.++..+++ +..++++.+++++++++.+.
T Consensus 234 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~ 310 (390)
T 1elu_A 234 ---HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLW 310 (390)
T ss_dssp ---CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ---CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 777777664321 1 233556666665544443 33346778888999999999
Q ss_pred HHHHHH
Q 013892 420 SSLARR 425 (434)
Q Consensus 420 ~~L~~~ 425 (434)
+.|+++
T Consensus 311 ~~L~~~ 316 (390)
T 1elu_A 311 RGLNQL 316 (390)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 988774
No 91
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.94 E-value=1.2e-26 Score=229.78 Aligned_cols=255 Identities=16% Similarity=0.158 Sum_probs=190.8
Q ss_pred ccccccCCCCCHHHHHHHHHHHHcCCCCC----CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 131 LDRSETQGLFSADSIERAWQILDQIPGRA----TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
+|+++++ ..|+.+++++.+.+.+..... ...|....|..++++++++++ | +++++|++|+|+++++..+
T Consensus 5 ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~ 77 (384)
T 1eg5_A 5 FDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----G--VSPSEIFFTSCATESINWI 77 (384)
T ss_dssp CBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--SCGGGEEEESCHHHHHHHH
T ss_pred EecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----C--CCCCeEEEECCHHHHHHHH
Confidence 3444433 678999999999887531100 112344567789999999988 3 5678999999999999999
Q ss_pred HHHHhc---CCCCEEEEcCCCChhHHHHH---HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 207 MQLLIR---SENDGILCPIPQYPLYSASI---ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 207 l~~l~~---~~gd~Vlv~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
++.+.. ++||+|+++.|+|+.+...+ +..|++++.+++++ ++.+|+++|++++++ ++++|++++|+
T Consensus 78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~ 149 (384)
T 1eg5_A 78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDE------DTFLVSIMAAN 149 (384)
T ss_dssp HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCT------TEEEEEEESBC
T ss_pred HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCC------CCeEEEEECCC
Confidence 999862 48999999999999887665 67899999999874 467999999999875 79999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcC--CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEG--LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~--~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
||||.+++ +++|.++|+++| ++||+||+|. |+.. ..++ ..++ . .+++.|+||.+ |++|
T Consensus 150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~---~~~~--~~~~----~~~~---~---di~~~s~sK~~-g~~G- 209 (384)
T 1eg5_A 150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT---IGKI--PFSL----EKLE---V---DYASFSAHKFH-GPKG- 209 (384)
T ss_dssp TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT---TTTS--CCCC----TTTC---C---SEEEEEGGGGT-SCTT-
T ss_pred CCcccccC---HHHHHHHHHhcCCceEEEEEhhhh---cCCc--ccCc----hhcC---C---CEEEecHHHhc-CCCc-
Confidence 99999999 789999999999 9999999997 3321 1111 1111 2 38899999987 7788
Q ss_pred eeEEEEEecCCHHH--HHHHHHH----hhcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 359 RGGYMEVTGFSAEV--REQIYKV----ASVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 359 R~G~~~~~~~~~~~--~~~l~~~----~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
+||+++ ++++ ...+... .....+++.+.+.++..+++. .+++++.+++++++++.+.+.|++
T Consensus 210 -~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 278 (384)
T 1eg5_A 210 -VGITYI---RKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN 278 (384)
T ss_dssp -CEEEEE---CTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEE---cCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC
Confidence 799987 5554 2222111 113346788888887777764 234567788888888888888876
No 92
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.94 E-value=1.8e-26 Score=227.74 Aligned_cols=250 Identities=13% Similarity=0.092 Sum_probs=180.4
Q ss_pred CCCHHHHHHHHHHHHcCCC-----CCCCCCCCCcchHHHHHH-HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 139 LFSADSIERAWQILDQIPG-----RATGAYSHSQGIKGLRDT-IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~-----~~~~~Y~~~~G~~~lr~~-ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
.+|+.+++++.+.+..... .....|.+..+..+++++ +++++ | .+ +|++|+|+++++..+++.++
T Consensus 20 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~----~--~~--~v~~~~g~t~a~~~~~~~~~- 90 (371)
T 2e7j_A 20 KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----G--CD--VARVTNGAREAKFAVMHSLA- 90 (371)
T ss_dssp CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----T--SS--EEEEESSHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc----C--CC--EEEEeCChHHHHHHHHHHHh-
Confidence 5688899998887754310 012345677889999999 99987 3 22 89999999999999999997
Q ss_pred CCCCEEEEcCCCChhHHHHHHHcCCeEEEEe--cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 213 SENDGILCPIPQYPLYSASIALHGGTLVPYY--LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
++||+|+++.|+|+.+...++..|++++.++ .++ ++.+|+++|++++++...+ .++++|++++|+||||.+++
T Consensus 91 ~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~-- 165 (371)
T 2e7j_A 91 KKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPD-- 165 (371)
T ss_dssp CTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCC--
T ss_pred CCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCC--
Confidence 7999999999999999999999999999999 653 4789999999999853221 27899999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
+++|.++|+++|+++|+||+|..+.+. .++. .++ .+ +++.|+||.+ + .|.|+||+++ ++
T Consensus 166 -~~~i~~~~~~~~~~li~D~a~~~~~~~-----~~~~----~~~---~d---i~~~s~sK~~-~-~~~~~G~~~~---~~ 224 (371)
T 2e7j_A 166 -VKKIAKVCSEYDVPLLVNGAYAIGRMP-----VSLK----EIG---AD---FIVGSGHKSM-A-ASGPIGVMGM---KE 224 (371)
T ss_dssp -HHHHHHHHHTTTCCEEEECTTTBTTBC-----CCHH----HHT---CS---EEEEEHHHHS-S-CCSSCEEEEE---CT
T ss_pred -HHHHHHHHHHcCCeEEEECccccCCCC-----CChh----hcC---CC---EEEecCCcCC-C-CCCCcEEEEE---ec
Confidence 799999999999999999999985432 1221 122 33 8899999998 4 3569999987 77
Q ss_pred HHHHH-HHHHhh--c------ccCCchHHHHHHHHHcCCCCCChHHHHHH--HHHHHHHHHHHHHH
Q 013892 371 EVREQ-IYKVAS--V------NLCSNISGQILASLVMSPPKVGDESYESY--CAERDGILSSLARR 425 (434)
Q Consensus 371 ~~~~~-l~~~~~--~------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~--~~~r~~l~~~L~~~ 425 (434)
++++. +..... . ...++...+.++...++..+. +..+++ +++++.+.+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 225 EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE--RIKRWDEEVEKARRFAAEMEKL 288 (371)
T ss_dssp TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHc
Confidence 77666 644332 1 234555555544444432111 445566 77777787777664
No 93
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=2.4e-25 Score=218.29 Aligned_cols=267 Identities=10% Similarity=0.061 Sum_probs=192.6
Q ss_pred CCCCccccccc-CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHH
Q 013892 126 DHPSILDRSET-QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVH 204 (434)
Q Consensus 126 ~~p~~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 204 (434)
..|.+++|+.+ ....|+.+++++.+.+. .|.+..|..++++++++++.+.+| .++++|++|+|+++++.
T Consensus 11 ~~p~~i~l~~~~~~~~~~~v~~a~~~~~~--------~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~ 80 (359)
T 1svv_A 11 AKPKPYSFVNDYSVGMHPKILDLMARDNM--------TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTNL 80 (359)
T ss_dssp ----CEECSCSCSSCCCHHHHHHHHHHTT--------CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHHH
T ss_pred CCCeeEEecCCCcCCCCHHHHHHHHHHHh--------hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHHH
Confidence 34556666555 33678888888877654 266667788899999999988877 56789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHH--HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHH-HhcCCCeeEEEEecCCC
Q 013892 205 MMMQLLIRSENDGILCPIPQYPLYSA--SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA-KAKGITVRALVVINPGN 281 (434)
Q Consensus 205 ~~l~~l~~~~gd~Vlv~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~g~~~~~i~l~~p~N 281 (434)
.+++.++ ++||+|+++.|+|+.+.. .++..|++++.++.+ +|.+|+++|++.+++. ...+.++++|++++| |
T Consensus 81 ~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 81 IACSLAL-RPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHHC-CTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHHh-CCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 9999998 799999999999999987 478899999999975 4789999999999872 011223899999999 7
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE
Q 013892 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (434)
Q Consensus 282 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G 361 (434)
|||.+++.+++++|+++|+++|+++|+||+|.++.++..+.......+ ... .+ +++.|.+|.. + ...+|
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~----~d---~~~~s~~K~g-~--~~~~g 224 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADI-ARL----TD---MFYIGATKAG-G--MFGEA 224 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHH-HHH----CS---EEEEECTTTT-C--SSCEE
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhh-hhc----CC---EEEEecccCC-C--CCceE
Confidence 999999999999999999999999999999955433321101111111 111 23 6778999964 3 35579
Q ss_pred EEEEecCCHHHHHHHHHHh--hcc-cCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 362 YMEVTGFSAEVREQIYKVA--SVN-LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~~--~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
++++ ++++++.+.... ..+ ...+......+..+++. ...++.+++++++++.+.+.|
T Consensus 225 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L 284 (359)
T 1svv_A 225 LIIL---NDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD-NLFFELGAHSNKMAAILKAGL 284 (359)
T ss_dssp EEEC---SGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE---cccHHHHHHHHHhcCCcccccchhhHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHh
Confidence 9876 788877776542 111 11122222223345654 334567888888999998888
No 94
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.94 E-value=8.3e-26 Score=225.35 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=184.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCC------CCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH--
Q 013892 139 LFSADSIERAWQILDQIPGRATG------AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-- 210 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~------~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-- 210 (434)
..|+.+++++.+.+..... ..+ .|.+..+..++++++++++ |.. ++++|++|+|+++++..++..+
T Consensus 34 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~g~t~a~~~~~~~~~~ 107 (406)
T 1kmj_A 34 QKPSQVIDAEAEFYRHGYA-AVHRGIHTLSAQATEKMENVRKRASLFI----NAR-SAEELVFVRGTTEGINLVANSWGN 107 (406)
T ss_dssp CCCHHHHHHHHHHHHHTCC-CCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCS-CGGGEEEESSHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHhhcC-CCCCCcchHHHHHHHHHHHHHHHHHHHc----CCC-CCCeEEEeCChhHHHHHHHHHhhh
Confidence 4688899999888876421 011 1335567888999999987 311 5689999999999999999998
Q ss_pred --hcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 211 --IRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 211 --~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
+ ++||+|+++.|+|+. |...++..|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||
T Consensus 108 ~~~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG 178 (406)
T 1kmj_A 108 SNV-RAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDE------KTRLLAITHVSNVLG 178 (406)
T ss_dssp HHC-CTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCT------TEEEEEEESBCTTTC
T ss_pred hcC-CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhcc------CCeEEEEeCCCcccc
Confidence 6 799999999999864 4456777899999999874 467899999999875 799999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.+++ +++|.++|+++|+++|+||+|..+.. ...+. .++ .+ +++.|+||.| |.+| +||++
T Consensus 179 ~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~-----~~~~~----~~~---~d---~~~~s~~K~~-g~~G--~G~~~ 237 (406)
T 1kmj_A 179 TENP---LAEMITLAHQHGAKVLVDGAQAVMHH-----PVDVQ----ALD---CD---FYVFSGHKLY-GPTG--IGILY 237 (406)
T ss_dssp CBCC---HHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHH----HHT---CS---EEEEEGGGTT-SCTT--CEEEE
T ss_pred CcCC---HHHHHHHHHHcCCEEEEEchhhcCCC-----CCccc----ccC---CC---EEEEEchhcc-CCCC--cEEEE
Confidence 9999 89999999999999999999986322 11221 122 23 8899999998 7788 89998
Q ss_pred EecCCHHHHHHHHHHhh----------------------cccCCchHHHHHHH-HHcCCC--CCChHHHHHHHHHHHHHH
Q 013892 365 VTGFSAEVREQIYKVAS----------------------VNLCSNISGQILAS-LVMSPP--KVGDESYESYCAERDGIL 419 (434)
Q Consensus 365 ~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~-~~l~~~--~~~~~~~~~~~~~r~~l~ 419 (434)
+ ++++++.+..... ...+.+.+.+.++. ..++.. ...++..++++++++.+.
T Consensus 238 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 314 (406)
T 1kmj_A 238 V---KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYAL 314 (406)
T ss_dssp E---CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred E---eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 7 8888887754321 11234555555433 333221 133466677777777777
Q ss_pred HHHHHH
Q 013892 420 SSLARR 425 (434)
Q Consensus 420 ~~L~~~ 425 (434)
+.|++.
T Consensus 315 ~~L~~~ 320 (406)
T 1kmj_A 315 SQLESV 320 (406)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 777653
No 95
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=2.8e-25 Score=222.83 Aligned_cols=259 Identities=11% Similarity=0.022 Sum_probs=187.7
Q ss_pred CCccccccc---CCCCCHHHHHHHHHHHHcCCCCCCCCCC----CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 128 PSILDRSET---QGLFSADSIERAWQILDQIPGRATGAYS----HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 128 p~~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
..++||+.+ +...++.+++++.+.+.+.+. ....|. ......++++.+++++ |. + +.+++ ++++
T Consensus 59 ~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----g~--~-~~i~~-~sGt 129 (409)
T 3kki_A 59 PDDIILQSNDYLALANHPLIKARLAKSLLEEQQ-SLFMSASFLQNDYDKPMIEKRLAKFT----GF--D-ECLLS-QSGW 129 (409)
T ss_dssp TTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCC-CCCSBGGGGCSTTTSCHHHHHHHHHH----TC--S-EEEEE-SCHH
T ss_pred CceEEeeccCccCCcCCHHHHHHHHHHHHHcCC-CCCccccccCCcHHHHHHHHHHHHHh----CC--C-eEEEe-cchH
Confidence 346777776 244589999999999887432 122232 2333566777777776 32 1 23455 5557
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 201 PAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 201 ~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+++..++.+++ ++||.|+++.|+|+.+...++..|++++.++. .|+++|++++++. ++++|++++|+
T Consensus 130 ~a~~~~l~~~~-~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~-----~~~~vi~~~~~ 196 (409)
T 3kki_A 130 NANVGLLQTIC-QPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRH-----GPGIIVVDSIY 196 (409)
T ss_dssp HHHHHHHHHHC-CTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHH-----CSCEEEEESBC
T ss_pred HHHHHHHHHhc-CCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhc-----CCeEEEECCCC
Confidence 99999999998 79999999999999999999999999998864 5899999999874 57899999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
||||.+.+ +++|+++|+++|++||+||+|.++.++... ..+.... .+. ++ ..|++.||||.| |++ +
T Consensus 197 nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g--~~~~~~~-~~~---~~-~di~~~s~sK~~-~~~---g 262 (409)
T 3kki_A 197 STLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNG--AGLLAEL-GLT---RE-VHFMTASLAKTF-AYR---A 262 (409)
T ss_dssp TTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGG--CCHHHHH-TCG---GG-CSEEEEESSSTT-CSS---C
T ss_pred CCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCC--Ccchhhc-CCC---CC-CCEEEeecchhh-CCC---c
Confidence 99999999 899999999999999999999987665431 1221111 111 12 128899999999 544 5
Q ss_pred EEEEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 361 GYMEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 361 G~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
||+++ ++++++.+..... .....+...+.++...++..+..++.+++++++++.+.+.|++.
T Consensus 263 g~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 263 GAIWC---NNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp EEEEE---SSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEE---CHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99987 7788887766432 22235555655555555433333677888888999998888764
No 96
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.94 E-value=8.1e-26 Score=225.17 Aligned_cols=256 Identities=9% Similarity=0.060 Sum_probs=192.6
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC--cchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCChHHH
Q 013892 126 DHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHS--QGIKGLRDTIAAGIEARDGFPADPN-DIFLTDGASPA 202 (434)
Q Consensus 126 ~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~~~a 202 (434)
..+..++++.++..+++.+++++.+.+ ...|.+. ....++|+++++++ | .+++ +|++|+|++++
T Consensus 15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~-------~~~~~~~~~~~~~~l~~~la~~~----~--~~~~~~v~~~~g~t~a 81 (396)
T 2ch1_A 15 IIPEKIMMGPGPSNCSKRVLTAMTNTV-------LSNFHAELFRTMDEVKDGLRYIF----Q--TENRATMCVSGSAHAG 81 (396)
T ss_dssp CCCCCBCCSSSSCCCCHHHHHHTTSCC-------CCTTCHHHHHHHHHHHHHHHHHH----T--CCCSCEEEESSCHHHH
T ss_pred CCCcceeecCCCCCCCHHHHHHhcccc-------ccCCChhHHHHHHHHHHHHHHHh----C--CCCCcEEEECCcHHHH
Confidence 344567778888888988887754332 1135432 23788999999987 2 4566 79999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 203 VHMMMQLLIRSENDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 203 l~~~l~~l~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+..++..++ ++||+|+++.|+|+.|. ..++..|++++.++++. ++.+|+++|++++++. ++++|++++|+
T Consensus 82 l~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~ 153 (396)
T 2ch1_A 82 MEAMLSNLL-EEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELH-----QPKCLFLTHGD 153 (396)
T ss_dssp HHHHHHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHH-----CCSEEEEESEE
T ss_pred HHHHHHHhc-CCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhC-----CCCEEEEECCC
Confidence 999999998 79999999999999985 47788999999999864 4679999999999864 68999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
||||.+++ +++|.++|+++|+++|+||+|.. +.. + ..+ ..++ .+ +++.|++|.+.+.+ ++
T Consensus 154 nptG~~~~---~~~i~~l~~~~~~~li~Dea~~~---g~~-~-~~~----~~~~---~d---~~~~s~~K~~~~~~--g~ 213 (396)
T 2ch1_A 154 SSSGLLQP---LEGVGQICHQHDCLLIVDAVASL---CGV-P-FYM----DKWE---ID---AVYTGAQKVLGAPP--GI 213 (396)
T ss_dssp TTTTEECC---CTTHHHHHHHTTCEEEEECTTTB---TTB-C-CCT----TTTT---CC---EEECCCC-CCCCCS--SC
T ss_pred CCCceecC---HHHHHHHHHHcCCEEEEEccccc---cCC-c-cch----hhcC---cC---EEEEcCCccccCCC--Ce
Confidence 99999999 88999999999999999999983 221 1 111 1111 23 56789999885444 45
Q ss_pred EEEEEecCCHHHHHHHHHH------------------------hhcccCCchHHHHHHHHHcCCC--CCChHHHHHHHHH
Q 013892 361 GYMEVTGFSAEVREQIYKV------------------------ASVNLCSNISGQILASLVMSPP--KVGDESYESYCAE 414 (434)
Q Consensus 361 G~~~~~~~~~~~~~~l~~~------------------------~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~ 414 (434)
||+++ ++++++.+... .....+++..+|.++..+++.. +.+++.+++++++
T Consensus 214 g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 290 (396)
T 2ch1_A 214 TPISI---SPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIEC 290 (396)
T ss_dssp EEEEE---CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEEEE---CHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99987 78888877531 0122356777888776666542 3456778888999
Q ss_pred HHHHHHHHHHH
Q 013892 415 RDGILSSLARR 425 (434)
Q Consensus 415 r~~l~~~L~~~ 425 (434)
++.+.+.|++.
T Consensus 291 ~~~l~~~L~~~ 301 (396)
T 2ch1_A 291 AQILYEGLGKM 301 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHC
Confidence 99999998875
No 97
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.94 E-value=8.1e-26 Score=224.92 Aligned_cols=260 Identities=9% Similarity=-0.026 Sum_probs=192.1
Q ss_pred HhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCC-CEEEcCC
Q 013892 122 LALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPN-DIFLTDG 198 (434)
Q Consensus 122 ~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G 198 (434)
+..+..+..++++.++..+|+.+++++.+.+.. .|.+ ..+..++++.+++++ | ++++ +|++|+|
T Consensus 12 ~~~~~~~~~~~~~~g~~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~l~~~la~~~----g--~~~~~~i~~~~g 78 (393)
T 2huf_A 12 REPLVTPNKLLMGPGPSNAPQRVLDAMSRPILG-------HLHPETLKIMDDIKEGVRYLF----Q--TNNIATFCLSAS 78 (393)
T ss_dssp GSCCCCCCCEECSSSCCCCCHHHHHHTTSCCCC-------TTSHHHHHHHHHHHHHHHHHH----T--CCCSEEEEESSC
T ss_pred hcccCCCCeEEecCCCCCCCHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEcCc
Confidence 344455667777778778899888876554321 2322 245677888888876 3 3454 8999999
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEcCCCChhH--HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEE
Q 013892 199 ASPAVHMMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVV 276 (434)
Q Consensus 199 ~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l 276 (434)
+++++..++..++ ++||+|+++.|+|+.+ ...++..|++++.++++++ +.+|+++|++++++. ++++|++
T Consensus 79 ~t~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~ 150 (393)
T 2huf_A 79 GHGGMEATLCNLL-EDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVG--QSLSLDEIRDALLIH-----KPSVLFL 150 (393)
T ss_dssp HHHHHHHHHHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEE
T ss_pred HHHHHHHHHHHHh-CCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCC--CCCCHHHHHHHHhcc-----CCcEEEE
Confidence 9999999999997 7999999999999884 3345668999999998753 579999999999764 6899999
Q ss_pred ecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC
Q 013892 277 INPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (434)
Q Consensus 277 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~ 356 (434)
++|+||||.+++ +++|.++|+++|+++|+||+|.. +.. ...+ ..++ . .+++.|+||.+.|++
T Consensus 151 ~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~---~~~--~~~~----~~~~---~---d~~~~s~sK~l~g~~ 212 (393)
T 2huf_A 151 TQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASL---GGA--PMFM----DRWE---I---DAMYTGSQKVLGAPP 212 (393)
T ss_dssp ESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB---TTB--CCCT----TTTT---C---SEEECCSSSTTCCCS
T ss_pred EccCCCccccCC---HHHHHHHHHHcCCEEEEEccccc---CCC--Ccch----hhcC---c---cEEEECCCcccccCC
Confidence 999999999999 88999999999999999999763 211 1111 1111 2 378899999875778
Q ss_pred CceeEEEEEecCCHHHHHHHHHHh----h--------------------cccCCchHHHHHHHHHcCCC--CCChHHHHH
Q 013892 357 GKRGGYMEVTGFSAEVREQIYKVA----S--------------------VNLCSNISGQILASLVMSPP--KVGDESYES 410 (434)
Q Consensus 357 G~R~G~~~~~~~~~~~~~~l~~~~----~--------------------~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~ 410 (434)
|+ ||+++ ++++++.+.... . ....++..++.++..+++.. ..+++.+++
T Consensus 213 G~--G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 287 (393)
T 2huf_A 213 GI--TPVSF---SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIAR 287 (393)
T ss_dssp SC--EEEEE---CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred Ce--EEEEE---CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 87 99987 889998887541 0 11245666666555455431 124567788
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 411 YCAERDGILSSLARR 425 (434)
Q Consensus 411 ~~~~r~~l~~~L~~~ 425 (434)
++++++.+.+.|++.
T Consensus 288 ~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 288 HEDCAKRLYRGLQDA 302 (393)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888888888764
No 98
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.94 E-value=4.7e-25 Score=220.40 Aligned_cols=262 Identities=13% Similarity=0.083 Sum_probs=191.1
Q ss_pred ccccccc---CCCCCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 130 ILDRSET---QGLFSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 130 ~l~~~~~---~~~~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
++++..+ +.+.++.+++++.+.+...... ....|+...+..++|+++++++ | .+++|++|+|++ ++
T Consensus 48 ~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~---~~~~i~~~sG~~-a~ 119 (401)
T 2bwn_A 48 ITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----Q---KEAALVFSSAYN-AN 119 (401)
T ss_dssp EEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----T---CSEEEEESCHHH-HH
T ss_pred EEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh----C---CCcEEEECCcHH-HH
Confidence 4566554 3335778999998888763210 1234666678999999999997 3 257889988877 66
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
..++..+.. .+||.|+++.|+|+.+...++..|++++.++.+ |+++|++.++.... .++++|++++|+||
T Consensus 120 ~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~np 190 (401)
T 2bwn_A 120 DATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSM 190 (401)
T ss_dssp HHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTT
T ss_pred HHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCC
Confidence 666665531 489999999999999999999999999999864 68899988874210 16889999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.+++ +++|+++|+++|+++|+||+|....|+... ..+.. ...+. ++ ..++++||||.| |++| ||
T Consensus 191 tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g--~~~~~-~~~~~---~~-~~i~~~s~sK~~-~~~G---G~ 256 (401)
T 2bwn_A 191 DGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRG--AGVAE-RDGLM---HR-IDIFNGTLAKAY-GVFG---GY 256 (401)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTS--CCHHH-HHTCG---GG-CSEEEEESSSTT-CSCC---EE
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCC--ceeee-ccCcc---cc-CcEEEeechhhc-cCCC---CE
Confidence 999999 899999999999999999999976665431 22221 11111 11 248899999999 6677 99
Q ss_pred EEEecCCHHHHHHHHHHhh---cccCCchHHHHHHHHHcCCCCC--ChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKVAS---VNLCSNISGQILASLVMSPPKV--GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~---~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++ ++++++.+..... ...+.+.+.+.++...++..+. .++.+++++++++.+.+.|++.
T Consensus 257 ~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (401)
T 2bwn_A 257 IAA---SARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 321 (401)
T ss_dssp EEE---CHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eec---CHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 987 8899888875432 1223345777666666643222 2577888888999999888875
No 99
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.7e-25 Score=223.78 Aligned_cols=271 Identities=12% Similarity=0.046 Sum_probs=189.4
Q ss_pred ChhHHHHHHhhcCC-CCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCC----CCcchHHHHHHHHHHHHhhcCCCC
Q 013892 114 PITFFREVLALCDH-PSILDRSETQGLFSADSIERAWQILDQIPGRATGAYS----HSQGIKGLRDTIAAGIEARDGFPA 188 (434)
Q Consensus 114 p~~~~r~v~~~~~~-p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~ 188 (434)
+...+|+.+..++. .-.+|++.+. ..|+.+++++.+.+..........|. ...+..++++++++++ | +
T Consensus 12 ~~~~~r~~fp~~~~~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~ 84 (406)
T 3cai_A 12 DVARVRGLHPSLGDGWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV----N--A 84 (406)
T ss_dssp CHHHHHHTCTTTTSSCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH----T--C
T ss_pred cHHHHHHhhhhcCCCeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--C
Confidence 34455555554442 2344444444 67889999999888763211112343 2345778888888887 3 4
Q ss_pred CCCCEEEcCChHHHHHHHHHHH---hcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHHH
Q 013892 189 DPNDIFLTDGASPAVHMMMQLL---IRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQL 261 (434)
Q Consensus 189 ~~~~i~~t~G~~~al~~~l~~l---~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l 261 (434)
++++|++|+|+++++..++.++ + ++||+|+++.|+|+.+...+.. .|++++.++++++ ++.+|+++|++++
T Consensus 85 ~~~~v~~~~g~t~al~~~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l 162 (406)
T 3cai_A 85 DPGGVVLGADRAVLLSLLAEASSSRA-GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLI 162 (406)
T ss_dssp CGGGEEEESCHHHHHHHHHHHTGGGG-BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHC
T ss_pred CCCeEEEeCChHHHHHHHHHHHhhcc-CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHh
Confidence 6789999999999999999887 5 6899999999999986555443 7999999998733 4578999999998
Q ss_pred HHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 262 EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..... ...+. .++ .+
T Consensus 163 ~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~----~~~---~d-- 219 (406)
T 3cai_A 163 SK------STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYR-----LLDIR----ETD---AD-- 219 (406)
T ss_dssp CT------TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTC-----CCCHH----HHC---CS--
T ss_pred CC------CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC-----CCCch----hcC---CC--
Confidence 75 7999999999999999999 88999999999999999999974211 11221 122 23
Q ss_pred EEEEecCCCCCCCCCCceeE-EEEEecCCHHHHHHHHHHhh----------cccCCchHHHHHHHHHcCCC-C-------
Q 013892 342 LVSFQSVSKGYYGECGKRGG-YMEVTGFSAEVREQIYKVAS----------VNLCSNISGQILASLVMSPP-K------- 402 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G-~~~~~~~~~~~~~~l~~~~~----------~~~~~~~~~q~~~~~~l~~~-~------- 402 (434)
+++.|+||.+ | ++ +| |+++ ++++++.+..... ....++..++.++...++.. +
T Consensus 220 -~~~~s~~K~~-g-~~--~G~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~ 291 (406)
T 3cai_A 220 -VVTVNAHAWG-G-PP--IGAMVFR---DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARG 291 (406)
T ss_dssp -EEEEEGGGGT-S-CS--CEEEEES---CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCS
T ss_pred -EEEeehhhhc-C-CC--cCeEEEE---ehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhcccccc
Confidence 7889999976 5 44 88 9976 7888776654321 12345555554443333211 1
Q ss_pred --------CChHHHHHHHHHHHHHHHHHHH
Q 013892 403 --------VGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 403 --------~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
+.++.+++++++++.+.+.|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 321 (406)
T 3cai_A 292 SRRERLAVSMQSADAYLNRVFDYLMVSLRS 321 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 2345666677777777777765
No 100
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.93 E-value=1.2e-25 Score=224.76 Aligned_cols=246 Identities=14% Similarity=0.166 Sum_probs=182.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC------
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------ 213 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~------ 213 (434)
.++.+++++.+.+.+... ....| +.....++++.++++ +| .++|++|+|+++++..+++.+...
T Consensus 56 ~~p~v~~a~~~~~~~~~~-~~~~~-~~~~~~~l~~~la~~----~~----~~~v~~~~gg~~a~~~al~~~~~~~~~~~~ 125 (406)
T 4adb_A 56 AHPELREALNEQASKFWH-TGNGY-TNEPVLRLAKKLIDA----TF----ADRVFFCNSGAEANEAALKLARKFAHDRYG 125 (406)
T ss_dssp TCHHHHHHHHHHHTTCSC-CCTTS-CCHHHHHHHHHHHHH----SS----CSEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhccc-ccCCc-CCHHHHHHHHHHHhh----CC----CCeEEEeCcHHHHHHHHHHHHHHHHHhcCC
Confidence 378899999988876321 11223 223345555555554 34 459999999999999999988621
Q ss_pred CC-CEEEEcCCCChhHHHHHHHcCC-------------eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 214 EN-DGILCPIPQYPLYSASIALHGG-------------TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 214 ~g-d~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
+| |+|++++|+|+.+...+...+. .+..++. .|+++|++++++ ++++|+++ |
T Consensus 126 ~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~-p 191 (406)
T 4adb_A 126 SHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDD------STCAVIVE-P 191 (406)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCST------TEEEEEEC-S
T ss_pred CCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcC------CeEEEEEe-C
Confidence 55 9999999999988665555544 3333332 379999988875 79888888 9
Q ss_pred CCCCccCC--CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC
Q 013892 280 GNPTGQVL--AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (434)
Q Consensus 280 ~NPtG~~~--~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G 357 (434)
+||||.++ +.+++++|+++|++||+++|+||+|.++.+.+. ...+. ..+ ..++ ++ ||||.| | +|
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~----~~~-~~~d--~~---t~sK~~-~-~G 257 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE--LYAYM----HYG-VTPD--LL---TTAKAL-G-GG 257 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHH----HHT-CCCS--EE---EECGGG-G-TT
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hHHHH----hcC-CCCC--EE---Eechhh-c-CC
Confidence 99999998 999999999999999999999999998666543 22221 111 2244 33 679999 6 89
Q ss_pred ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 358 KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 358 ~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+|+||+++ ++++++.+..... ...+.+++.+.++...++..+. ++.+++++++++.+.+.|++...
T Consensus 258 ~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~ 324 (406)
T 4adb_A 258 FPVGALLA---TEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-PEMLNGVKQRHDWFVERLNTINH 324 (406)
T ss_dssp SCCEEEEE---CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEE---cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 8999888766543 4557889999988877764322 67888999999999999988754
No 101
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.93 E-value=6.4e-25 Score=221.78 Aligned_cols=261 Identities=13% Similarity=0.108 Sum_probs=191.6
Q ss_pred Cccccccc-CC--CCCHHHHHHHHHHHHcCCCCCCCCCCCCcc----hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 129 SILDRSET-QG--LFSADSIERAWQILDQIPGRATGAYSHSQG----IKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 129 ~~l~~~~~-~~--~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G----~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
.++||+.+ +. ..++.+++++.+.+...+. ....|....| ..++++.+++++ |. ++.++++++++
T Consensus 65 ~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~G~~~~~~~l~~~la~~~----g~----~~~i~~~sGs~ 135 (427)
T 2w8t_A 65 DTILLGTYNYMGMTFDPDVIAAGKEALEKFGS-GTCGSRMLNGTFHDHMEVEQALRDFY----GT----TGAIVFSTGYM 135 (427)
T ss_dssp EEEECSCCCTTCGGGCHHHHHHHHHHHHHHCS-CCCSCTTTTCCCHHHHHHHHHHHHHH----TC----SEEEEESCHHH
T ss_pred eEEEEECcccccCCCCHHHHHHHHHHHHHhCC-CCcccccccCCcHHHHHHHHHHHHHh----CC----CceEEecCcHH
Confidence 35666666 21 3678899999888876321 2333444444 467777777776 42 24555555567
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC
Q 013892 202 AVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (434)
Q Consensus 202 al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N 281 (434)
++..++.+++ ++||.|+++.|+|..+...++..|++++.++. +|+++|++.+++... .++++|++++|+|
T Consensus 136 a~~~al~~l~-~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~--~~~~~v~~~~~~n 205 (427)
T 2w8t_A 136 ANLGIISTLA-GKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPK--EPAKLVVLEGVYS 205 (427)
T ss_dssp HHHHHHHHHS-CTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESEET
T ss_pred HHHHHHHHhc-CCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccC--CCCeEEEEcCCCC
Confidence 8888888887 79999999999999999999999999998873 589999999875211 1578999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE
Q 013892 282 PTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG 361 (434)
Q Consensus 282 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G 361 (434)
|||.+++ +++|.++|+++|+++|+||+|..+.++.. ...+... ++ ..++ ..|++.||||.| |++| |
T Consensus 206 ~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~--g~~~~~~---~~-~~~~-~di~~~s~sK~~-g~~g---G 271 (427)
T 2w8t_A 206 MLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPN--GRGVYEA---QG-LEGQ-IDFVVGTFSKSV-GTVG---G 271 (427)
T ss_dssp TTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT--SCCHHHH---TT-CTTC-CSEEEEESSSTT-CSCC---E
T ss_pred CCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC--CCchHhh---cC-CCcC-CcEEEecchhhh-ccCC---C
Confidence 9999999 89999999999999999999999888643 2222221 11 1123 248899999998 6555 9
Q ss_pred EEEEecCCHHHHHHHHHHh-h--cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 362 YMEVTGFSAEVREQIYKVA-S--VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 362 ~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
|+++ ++++++.+.... . .....+...+.++...++..+..++.+++++++++.+.+.|++.
T Consensus 272 ~v~~---~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 272 FVVS---NHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp EEEE---CCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEe---CHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 9987 778888776542 2 23355666666665666544446788999999999999999876
No 102
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.93 E-value=1.3e-24 Score=217.53 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=165.8
Q ss_pred CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEE
Q 013892 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLV 240 (434)
Q Consensus 165 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~ 240 (434)
+..+..++++.+++++ |. + +.++++++++++..++..++ ++||+|+++.|+|+.+...+ +..|.+++
T Consensus 62 ~~~~~~~l~~~la~~~----g~--~--~~i~~~sG~~a~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~ 132 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLE----RG--E--AGLATASGISAITTTLLTLC-QQGDHIVSASAIYGCTHAFLSHSMPKFGINVR 132 (398)
T ss_dssp CCHHHHHHHHHHHHHH----TC--S--EEEEESSHHHHHHHHHHHHC-CTTCEEEEESSSCHHHHHHHHTHHHHTTCEEE
T ss_pred CChHHHHHHHHHHHHh----CC--C--cEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCcccHHHHHHHHHHHcCCEEE
Confidence 3455677777777776 42 2 45555556699999999988 79999999999999988876 77899999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 320 (434)
.++.+ |+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 133 ~v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 195 (398)
T 2rfv_A 133 FVDAA-------KPEEIRAAMRP------ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ- 195 (398)
T ss_dssp EECTT-------SHHHHHHHCCT------TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EeCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 98864 78999998875 7999999999999999998 9999999999999999999999865532
Q ss_pred CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHH-HHHHHhh-c-ccCCchHHHHHHHH
Q 013892 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVAS-V-NLCSNISGQILASL 396 (434)
Q Consensus 321 ~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~-~l~~~~~-~-~~~~~~~~q~~~~~ 396 (434)
+. .++ . .+++.|+||.| +.+|+|+ ||+++ ++++++ .+..... . ..+.+.+.++++..
T Consensus 196 -~~--------~~~---~---di~~~s~sK~~-~~~g~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 2rfv_A 196 -PL--------QLG---A---DIVVHSVTKYI-NGHGDVIGGIIVG---KQEFIDQARFVGLKDITGGCMSPFNAWLTLR 256 (398)
T ss_dssp -GG--------GGT---C---SEEEEETTTTT-TCSSCCCCEEEEE---CHHHHHHHHHTHHHHTTCCCCCHHHHHHHHH
T ss_pred -ch--------hhC---C---cEEEEeCcccc-cCCCCceEEEEEE---CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHh
Confidence 11 111 2 38899999999 6799998 99987 888876 5655444 3 45778888988888
Q ss_pred HcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 397 VMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 397 ~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.++. +...++...++.+.+.+.|+++
T Consensus 257 ~l~~---~~~~~~~~~~~~~~l~~~l~~~ 282 (398)
T 2rfv_A 257 GVKT---LGIRMERHCENALKIARFLEGH 282 (398)
T ss_dssp HHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhh---HHHHHHHHHHHHHHHHHHHHcC
Confidence 8854 2345556666777777766653
No 103
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.93 E-value=6.3e-24 Score=215.98 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=179.8
Q ss_pred cccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCccccccc--CCCCCHHH
Q 013892 67 KCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSET--QGLFSADS 144 (434)
Q Consensus 67 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~--~~~~p~~v 144 (434)
.++.+....+..++.+++.. | .+++++..|++.. |+..+ +..+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~---g------~~~~~l~~~~~yl----------------------D~~~~~~~~~~~~~~ 60 (456)
T 2ez2_A 12 SVETVSMIPRDERLKKMQEA---G------YNTFLLNSKDIYI----------------------DLLTDSGTNAMSDKQ 60 (456)
T ss_dssp CCCCCCCCCHHHHHHHHHHT---T------TCGGGSCGGGCSE----------------------ECSCSSSCCCCCHHH
T ss_pred eecccCCCCHHHHHHHHHHC---C------CCcccCCccccee----------------------eeccccCCccCCHHH
Confidence 34333333456666666554 2 4688888887632 33333 33456666
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC
Q 013892 145 IERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ 224 (434)
Q Consensus 145 ~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~ 224 (434)
++++. . ....|.+..|..+|++++++++. .+++++|+|+++++..++++++ ++|| +++.|+
T Consensus 61 ~~a~~----~----~~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~-~~gd--i~~~~~ 121 (456)
T 2ez2_A 61 WAGMM----M----GDEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAI-KPGQ--YVAGNM 121 (456)
T ss_dssp HHHHT----T----CCCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHC-CTTC--EEEESS
T ss_pred HHHhh----c----chhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhC-CCCC--Eecccc
Confidence 65543 2 13468888899999999999982 3479999999999999999997 7999 788999
Q ss_pred C-hhHHHHHHHcCCeEEEEecCCC----C----CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC-CCccCCCHHHHHH
Q 013892 225 Y-PLYSASIALHGGTLVPYYLDEA----T----GWGLETSEVKKQLEAAKAKGITVRALVVINPGN-PTGQVLAEENQRA 294 (434)
Q Consensus 225 y-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N-PtG~~~~~~~l~~ 294 (434)
| +.+...++..|++++.++++++ + +|.+|+++|++++++... ..+++|++++|+| |||.+++.+++++
T Consensus 122 ~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~~ 199 (456)
T 2ez2_A 122 YFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMRA 199 (456)
T ss_dssp CCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred ccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHHH
Confidence 9 8888899999999999988732 2 368999999999986310 1358999999998 9999999999999
Q ss_pred HHHHHHHcCCEEEEccCCCC----------CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 295 IVDFCKKEGLVLLADEVYQE----------NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~----------~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
|+++|++||+++|+||+|.. +.|.+. .+..+...++ ...| ++++ |++|.+ + +| |+||++
T Consensus 200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~----~~~~~~~~~~-~~~d--~~~~-S~kk~~-~-~~-~gG~~~ 268 (456)
T 2ez2_A 200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENK----SIAEIVHEMF-SYAD--GCTM-SGKKDC-L-VN-IGGFLC 268 (456)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTS----CHHHHHHHHH-TTCS--EEEE-ETTTTT-C-CS-SCEEEE
T ss_pred HHHHHHHcCCeEEEEccccccccccccccccccCCc----chhhhhhhhc-ccCC--EEEE-eCcccC-C-CC-ceeEEE
Confidence 99999999999999999986 344432 1111110111 1234 4555 777754 4 67 899997
Q ss_pred EecCCHHHHHHHHHHh
Q 013892 365 VTGFSAEVREQIYKVA 380 (434)
Q Consensus 365 ~~~~~~~~~~~l~~~~ 380 (434)
. .++++++.+....
T Consensus 269 ~--~~~~~~~~~~~~~ 282 (456)
T 2ez2_A 269 M--NDDEMFSSAKELV 282 (456)
T ss_dssp E--SCHHHHHHHHHHH
T ss_pred E--CCHHHHHHHHHHH
Confidence 5 3688888887654
No 104
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.93 E-value=1.9e-25 Score=224.85 Aligned_cols=270 Identities=14% Similarity=0.113 Sum_probs=191.6
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.++|+..+ +.+ .|+.+++++.+.+..... ....|.+..+..++++++++++. | + .+++|++|+|+++++
T Consensus 42 ~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~a~ 115 (426)
T 1sff_A 42 EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSH-TCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSEAV 115 (426)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSC-CCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHHHH
T ss_pred EEEEcccChhhcccCCCCHHHHHHHHHHHHhCCC-ccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHHHH
Confidence 35666544 222 578899999888865432 12357778889999999999972 3 2 348999999999999
Q ss_pred HHHHH---HHhcCCCCEEEEcCCCChhHH-HHHHHcCCe-------------EEEEecCC---CCCCCCCHHHHHHHHHH
Q 013892 204 HMMMQ---LLIRSENDGILCPIPQYPLYS-ASIALHGGT-------------LVPYYLDE---ATGWGLETSEVKKQLEA 263 (434)
Q Consensus 204 ~~~l~---~l~~~~gd~Vlv~~p~y~~~~-~~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~l~~ 263 (434)
..+++ .+. ++| .|++++|+|+.+. ..+...|.+ ++.++++. ..++.+|+++|++++++
T Consensus 116 ~~~~~~a~~~~-~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~ 193 (426)
T 1sff_A 116 ENAVKIARAAT-KRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN 193 (426)
T ss_dssp HHHHHHHHHHH-TCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-CCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHh
Confidence 99988 666 565 9999999998754 456666653 66676643 12345789999999874
Q ss_pred HHhcCCCeeEEEEe-cCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 264 AKAKGITVRALVVI-NPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 264 ~~~~g~~~~~i~l~-~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
.. .+.++++|+++ +++| || .+++.+++++|.++|++||++||+||+|.++.+.+. ...+. ..+ ..++
T Consensus 194 ~~-~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~----~~~-~~~d-- 262 (426)
T 1sff_A 194 DA-APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT--LFAME----QMG-VAPD-- 262 (426)
T ss_dssp TC-CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGG----GTT-SCCS--
T ss_pred cc-CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc--hhhhh----hcC-CCCC--
Confidence 10 00167777775 6688 99 788999999999999999999999999998655442 22211 111 1233
Q ss_pred EEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
+.||||.| |. |+|+||+++ ++++++.+..... ...+.++++|.++..+++..+. ++..+++++.++.+.+
T Consensus 263 ---i~s~sK~~-~~-GlriG~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~ 333 (426)
T 1sff_A 263 ---LTTFAKSI-AG-GFPLAGVTG---RAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ-ENLLQKANDLGQKLKD 333 (426)
T ss_dssp ---EEEECGGG-GT-SSCCEEEEE---EHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHH
T ss_pred ---EEEEcccc-cC-CCceEEEEE---cHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHH
Confidence 33999999 64 999999988 7888877754322 4457788999888766642111 2466778888888888
Q ss_pred HHHHHH
Q 013892 421 SLARRA 426 (434)
Q Consensus 421 ~L~~~~ 426 (434)
.|++..
T Consensus 334 ~l~~~~ 339 (426)
T 1sff_A 334 GLLAIA 339 (426)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 105
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=6.2e-25 Score=217.96 Aligned_cols=261 Identities=11% Similarity=0.012 Sum_probs=187.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC----
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE---- 214 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~---- 214 (434)
.+++.+++++.+.+... ...|....|..++++.+++++.+.+| +++++|++|+|+++++..++..+. .+
T Consensus 41 ~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~-~~~~~~ 113 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETN----LGDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIK-NIWREK 113 (397)
T ss_dssp CCCTHHHHHHHHHTTCC----TTSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHH-HHHHHH
T ss_pred CCcHHHHHHHHHHHhhc----CCCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHH-HHHHhh
Confidence 45677888888877653 22222223667888888888888776 467899999999999999999987 45
Q ss_pred ---------CCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 215 ---------NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 215 ---------gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
||+|+++.|+|+.+...++..|++++.+++++ ++.+|+++|++++++. ++++|++++|+||||.
T Consensus 114 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~ 186 (397)
T 3f9t_A 114 RRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGT 186 (397)
T ss_dssp HHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCC
T ss_pred hhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCC
Confidence 99999999999999999999999999999875 4689999999999863 5889999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH--HhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV--SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~--~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
+.+ +++|.++|+++|+++|+||+|..+.++.......+... ...+. . + ..+++.|++|.+ + +|.|+||+
T Consensus 187 ~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~s~~K~~-~-~~~~~g~~ 257 (397)
T 3f9t_A 187 IDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS--L-G-VDSITIDPHKMG-H-CPIPSGGI 257 (397)
T ss_dssp BCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG--G-T-CSEEECCTTTTT-C-CCSSCEEE
T ss_pred CCC---HHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccccc--c-c-CCeEEEcccccc-C-CCCCceEE
Confidence 988 88899999999999999999998655322100000000 00000 0 1 127788999976 3 68899999
Q ss_pred EEecCCHHHHHHHHHHhhc-c-----------cCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 364 EVTGFSAEVREQIYKVASV-N-----------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 364 ~~~~~~~~~~~~l~~~~~~-~-----------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++ .++.+++.+...... . ...+...+.++...+.. ...++..++++++++.+.+.|++.
T Consensus 258 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 328 (397)
T 3f9t_A 258 LF--KDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGR-EGQRKIVNECMENTLYLYKKLKEN 328 (397)
T ss_dssp EE--SSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE--eCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 76 355555544322211 1 11245566666555532 234566777778888888888765
No 106
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.93 E-value=4.1e-25 Score=219.79 Aligned_cols=248 Identities=11% Similarity=0.022 Sum_probs=178.8
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
+...|+.+++++.+.+.. ...|....+..++++++++++ | +++++|++|+|+++++..+++.++ ++||
T Consensus 17 ~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~t~g~t~a~~~~~~~~~-~~gd 84 (392)
T 2z9v_A 17 PVNAYPEVLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAM----R--LSNKPVILHGEPVLGLEAAAASLI-SPDD 84 (392)
T ss_dssp CCCCCHHHHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHT----T--CSSCCEEESSCTHHHHHHHHHHHC-CTTC
T ss_pred CcCCCHHHHHHHhccccc-----cccHHHHHHHHHHHHHHHHHh----C--CCCCEEEEeCCchHHHHHHHHHhc-CCCC
Confidence 445688888776554322 111222345677888888876 4 457899999999999999999997 7999
Q ss_pred EEEEcCCCChhH--HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHH
Q 013892 217 GILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 217 ~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
+|+++.|+|+.+ ...++..|++++.++++++ +.+|+++|++++++ ..++++|++++|+||||.+++ +++
T Consensus 85 ~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 85 VVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKA----HPEITVVSVCHHDTPSGTINP---IDA 155 (392)
T ss_dssp CEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHH----CTTCCEEEEESEEGGGTEECC---HHH
T ss_pred EEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhc----CCCCcEEEEeccCCCCceecc---HHH
Confidence 999999999875 3445668999999998754 46899999999964 116889999999999999999 889
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
|.++|+++|+++|+||+|..... ...+ ..++ .+ +++.|+||.+.|.+|+ ||+++ ++++++
T Consensus 156 i~~l~~~~~~~li~D~a~~~g~~-----~~~~----~~~~---~d---~~~~s~sK~~~~~~g~--G~l~~---~~~~~~ 215 (392)
T 2z9v_A 156 IGALVSAHGAYLIVDAVSSFGGM-----KTHP----EDCK---AD---IYVTGPNKCLGAPPGL--TMMGV---SERAWA 215 (392)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTB-----SCCG----GGGT---CS---EEEECSSSTTCCCSCC--EEEEE---CHHHHH
T ss_pred HHHHHHHcCCeEEEEcccccCCc-----cccc----cccc---ce---EEEecCcccccCCCce--eEEEE---CHHHHH
Confidence 99999999999999999974211 1111 1111 23 7889999977565565 99987 888888
Q ss_pred HHHHHh--------------------h-cccCCchHHHHHHHHHcCCC-CC-ChHHHHHHHHHHHHHHHHHHHH
Q 013892 375 QIYKVA--------------------S-VNLCSNISGQILASLVMSPP-KV-GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 375 ~l~~~~--------------------~-~~~~~~~~~q~~~~~~l~~~-~~-~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+.... . ....++...+.++..+++.. ++ +++.+++++++++.+.+.|++.
T Consensus 216 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 289 (392)
T 2z9v_A 216 KMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM 289 (392)
T ss_dssp HHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc
Confidence 875421 1 12345555555554444321 11 3566778888888888888764
No 107
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=2.9e-25 Score=219.79 Aligned_cols=253 Identities=9% Similarity=0.022 Sum_probs=180.3
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
.++.++..+|+.+++++.+.+.. ...+.......++++.+++++ |.+.++++|++|+|+++++. ++..++
T Consensus 5 ~~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~----~~~~~~~~v~~~~g~t~al~-~~~~~~ 74 (384)
T 3zrp_A 5 LLHVGPTTIKEDVLVAGLENNVG-----FTSKEFVEALAYSLKGLRYVM----GASKNYQPLIIPGGGTSAME-SVTSLL 74 (384)
T ss_dssp -CCSSCSCCCHHHHHHTTCCSCC-----TTSHHHHHHHHHHHHHHHHHH----TCCTTSEEEEEESCHHHHHH-HGGGGC
T ss_pred eccCCCCCCCHHHHHHhhccccc-----cccHHHHHHHHHHHHHHHHHh----CCCCCCcEEEEcCCcHHHHH-HHHhhc
Confidence 34455667888888776543321 111111233455666666665 54333388999999999999 888887
Q ss_pred cCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 212 RSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
++||+|+++.|+|.. +...++..|++++.++++.+ +.+|+++|++++++. ++++|++++|+||||.+++
T Consensus 75 -~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~- 145 (384)
T 3zrp_A 75 -KPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPG--DYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREP- 145 (384)
T ss_dssp -CTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTT--CCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECC-
T ss_pred -CCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCC--CCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECc-
Confidence 799999999999965 66667788999999998763 578999999999873 6899999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|.++|+++|+++|+|++|....... .+ ... ..+ +++.|+||.|+|.+| +||+++ +
T Consensus 146 --l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~----~~~---~~d---~~~~s~~K~~~~~~g--~g~~~~---~ 203 (384)
T 3zrp_A 146 --VKDVINKIRKYVELIVVDGVSSVGAEEV-----KA----EEW---NVD---VYLTASQKALGSAAG--LGLLLL---S 203 (384)
T ss_dssp --HHHHHHHHGGGEEEEEEECTTTTTTSCC-----CT----TTT---TCS---EEEEETTSTTCCCSS--EEEEEE---C
T ss_pred --HHHHHHHHHhcCCEEEEECcccccCccc-----cc----ccc---CCC---EEEecCcccccCCCc--eEEEEE---C
Confidence 8899999999999999999987532211 11 011 123 889999999854444 899987 8
Q ss_pred HHHHHHH-------------HHHhh----------cc-cCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHH
Q 013892 370 AEVREQI-------------YKVAS----------VN-LCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 370 ~~~~~~l-------------~~~~~----------~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
+++++.+ ..... .. .+++...+.++...++. ...+++.+++++++++.+.+.|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 283 (384)
T 3zrp_A 204 PKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLE 283 (384)
T ss_dssp HHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 8888877 22211 11 25566666655555432 12245777888888888888887
Q ss_pred HH
Q 013892 424 RR 425 (434)
Q Consensus 424 ~~ 425 (434)
+.
T Consensus 284 ~~ 285 (384)
T 3zrp_A 284 AL 285 (384)
T ss_dssp HT
T ss_pred HC
Confidence 65
No 108
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.93 E-value=2.1e-25 Score=222.73 Aligned_cols=245 Identities=12% Similarity=0.134 Sum_probs=178.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----C
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----E 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-----~ 214 (434)
.++++++++.+.+..... ....| + .++++.+++.+.+.+| .+++++|+|+++++..+++.+... +
T Consensus 57 ~~~~v~~a~~~~~~~~~~-~~~~~-~----~~~~~~l~~~la~~~g----~~~v~~~~gg~~a~~~al~~~~~~~~~~~~ 126 (397)
T 2ord_A 57 SHPRLVEAIKDQAEKLIH-CSNLF-W----NRPQMELAELLSKNTF----GGKVFFANTGTEANEAAIKIARKYGKKKSE 126 (397)
T ss_dssp TCHHHHHHHHHHHHHCSC-CCTTS-E----EHHHHHHHHHHHHTTT----SCEEEEESSHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHhccc-Ccccc-C----CHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHHHHHHHHHHHhhcCCC
Confidence 478899999988876422 11123 1 2344444444444444 579999999999999999987510 4
Q ss_pred -CCEEEEcCCCChh-HHHHHHHcCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 215 -NDGILCPIPQYPL-YSASIALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 215 -gd~Vlv~~p~y~~-~~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
++.|++++|+|.. +...++..|.+ ++.++. .|+++|++++++ ++++|++++|+
T Consensus 127 ~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~ 193 (397)
T 2ord_A 127 KKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE------DVCAVFLEPIQ 193 (397)
T ss_dssp TCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT------TEEEEEECSEE
T ss_pred CCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc------CeEEEEEeccc
Confidence 4789999999965 44467777776 666654 279999998875 79999999999
Q ss_pred CCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 281 NPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 281 NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
||||. +++.+++++|+++|+++|+++|+||+|.++.+.+. ..++. .++ ..+| ++ ||||.| | +|+|
T Consensus 194 nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~----~~~-~~~d--~~---s~sK~~-~-~G~r 259 (397)
T 2ord_A 194 GESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK--LFAYQ----KYG-VVPD--VL---TTAKGL-G-GGVP 259 (397)
T ss_dssp CTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSHHH----HHT-CCCS--EE---EECGGG-G-TTSC
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc--chhhh----hhC-CCCC--ee---eecccc-C-CCcC
Confidence 99999 99999999999999999999999999998655443 22221 122 1245 33 789999 6 7999
Q ss_pred eEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+||+++ +++++ .+.... ....+.+.+.|.++...++..+. ++.+++++++++.+.+.|++..
T Consensus 260 ~G~~~~---~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~ 322 (397)
T 2ord_A 260 IGAVIV---NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGNYLMKKLQEMK 322 (397)
T ss_dssp CEEEEE---CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEE---chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHH
Confidence 999987 55665 543322 24456788888888777754332 5688999999999999998764
No 109
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.93 E-value=3.6e-25 Score=219.01 Aligned_cols=244 Identities=14% Similarity=0.145 Sum_probs=178.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH--hc---CC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--IR---SE 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--~~---~~ 214 (434)
.++.+.+++.+.+..... ....| +..+..++++++++++ |. +++|++|+|+++++..++..+ .. ++
T Consensus 45 ~~~~v~~a~~~~~~~~~~-~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~ 115 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKLLH-VSNLY-ENPWQEELAHKLVKHF----WT---EGKVFFANSGTESVEAAIKLARKYWRDKGK 115 (375)
T ss_dssp SCHHHHHHHHHHHHHCSC-CCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhccc-cCccc-CCHHHHHHHHHHHhhc----CC---CCeEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 678899999888876422 13457 4467888999988875 43 389999999999999998753 11 36
Q ss_pred C-CEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 215 N-DGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 215 g-d~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
| |+|++++|+|+.+...+...+.. +..++. .|+++|++++++ ++++|++++|+
T Consensus 116 g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~ 182 (375)
T 2eh6_A 116 NKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDE------ETAGIIIEVIQ 182 (375)
T ss_dssp CCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCT------TEEEEEECSEE
T ss_pred CCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHhcC------CeEEEEEeCcc
Confidence 7 99999999999877665554332 222221 489999988865 79999999999
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 281 NPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 281 NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
||||.+ .+.+++++|.++|+++|+++|+||+|.++.+.+. ..++. .++ ..+| ++ ||||.| + +|+|
T Consensus 183 ~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~----~~~-~~~d--~~---s~SK~~-~-~g~~ 248 (375)
T 2eh6_A 183 GEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE--FYAYQ----HFN-LKPD--VI---ALAKGL-G-GGVP 248 (375)
T ss_dssp TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGG----GGT-CCCS--EE---EECGGG-G-TTSC
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--chhhh----hcC-CCCC--EE---EEcccc-c-CCCC
Confidence 999999 5688899999999999999999999998544332 11221 122 1244 33 888999 5 6999
Q ss_pred eEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+||+++ ++++++.+.... ....+.+.+.+.++..+++..+ +..++++++++.+.+.|++.
T Consensus 249 ~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~L~~~ 309 (375)
T 2eh6_A 249 IGAILA---REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE---KLLPHVREVGNYFKEKLKEL 309 (375)
T ss_dssp CEEEEE---EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEE---cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 999987 778877765522 2344668888888777775422 56677778888888877653
No 110
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.93 E-value=6.8e-25 Score=223.77 Aligned_cols=220 Identities=16% Similarity=0.174 Sum_probs=166.0
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHc
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALH 235 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~ 235 (434)
...|+ ..|.+ +++++++++.+.+|. +++++++|+++++..++. ++ ++||+|+++.|+|+.+... ++..
T Consensus 124 ~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt~al~~~l~-~~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~ 195 (464)
T 1ibj_A 124 PYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGMAALSAVTH-LI-KNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_dssp SCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTSGGG
T ss_pred Ccccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHHHHHHHHHH-Hh-CCCCEEEEECCCchhHHHHHHHHHHHc
Confidence 45676 45666 788888888887773 367777778899988886 56 7999999999999998764 4567
Q ss_pred CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 236 GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 236 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
|++++.++++ |+++|++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|...
T Consensus 196 G~~v~~v~~~-------d~~~l~~~i~~------~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g 259 (464)
T 1ibj_A 196 GVVVKRVNTT-------KLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSP 259 (464)
T ss_dssp TCEEEEECTT-------SHHHHHHHCCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCT
T ss_pred CCEEEEeCCC-------CHHHHHHHhcc------CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccc
Confidence 9999998863 78999998875 7999999999999999997 899999999999999999999763
Q ss_pred ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 316 VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 316 ~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
... ..+ .++ . .|+++|+||.|+|..|+|+||+++ .++++++.+..... ...+.+++.|+++
T Consensus 260 ~~~-----~~~-----~~~---~---div~~S~sK~~~g~~Gl~~G~l~~--~~~~l~~~l~~~~~~~g~~~~~~~~~a~ 321 (464)
T 1ibj_A 260 VLS-----RPL-----ELG---A---DIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_dssp TTC-----CGG-----GTT---C---SEEEEETTTTTTCSSCCCCEEEEE--CSHHHHHHHHHHHHHTTCBCCHHHHHHH
T ss_pred ccC-----Chh-----hcC---C---EEEEECCcccccCCCCCcEEEEEE--ChHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 211 111 111 2 388999999996656999999987 23688888877765 4556788888888
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
...++.. ...++...++...+.+.|++
T Consensus 322 ~~al~~~---~~r~~~~~~~~~~l~~~l~~ 348 (464)
T 1ibj_A 322 LRGIKTM---ALRIEKQQENARKIAMYLSS 348 (464)
T ss_dssp HHHHTTH---HHHHHHHHHHHHHHHHHHHT
T ss_pred HhchhhH---HHHHHHHHHHHHHHHHHHHh
Confidence 7777532 23334444444444444443
No 111
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=7.1e-25 Score=214.51 Aligned_cols=247 Identities=13% Similarity=0.084 Sum_probs=179.6
Q ss_pred ccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc
Q 013892 133 RSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 212 (434)
Q Consensus 133 ~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~ 212 (434)
+..++..+|+.+++++.+.+.. ...|....+..++|+++++++ | ++++++++|+|+++++..+++.++
T Consensus 5 ~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~----g--~~~~~i~~~~g~t~a~~~~~~~~~- 72 (352)
T 1iug_A 5 LTPGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAF----R--TEGEVLILTGSGTLAMEALVKNLF- 72 (352)
T ss_dssp CSSSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHH----T--CSSEEEEEESCHHHHHHHHHHHHC-
T ss_pred ccCCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHh----C--CCCceEEEcCchHHHHHHHHHhcc-
Confidence 4444667888888887655431 112222345678888888887 3 456899999999999999999998
Q ss_pred CCCCEEEEcCCCChhHH--HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 213 SENDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
++||+|+++.|+|+.+. ..++..|++++.++++++ +.+|+++|++ + ++++|++++|+||||.+++
T Consensus 73 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~-- 139 (352)
T 1iug_A 73 APGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYG--DTPRPEDVAK---E------GYAGLLLVHSETSTGALAD-- 139 (352)
T ss_dssp CTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCTTTSCC---S------SCSEEEEESEETTTTEECC--
T ss_pred CCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHhc---c------CCcEEEEEEecCCcceecC--
Confidence 79999999999999975 445668999999998653 4688888776 2 7899999999999999999
Q ss_pred HHHHHHHHHHHc--CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 291 NQRAIVDFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 291 ~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
+++|.++|+++ |+++|+||+|.. +.. ++ .+ ..++ .+ +++.|+||.+.|.+| +||+++
T Consensus 140 -l~~i~~l~~~~~~~~~li~D~a~~~---~~~-~~-~~----~~~~---~d---~~~~s~~K~~~~~~g--~G~~~~--- 198 (352)
T 1iug_A 140 -LPALARAFKEKNPEGLVGADMVTSL---LVG-EV-AL----EAMG---VD---AAASGSQKGLMCPPG--LGFVAL--- 198 (352)
T ss_dssp -HHHHHHHHHHHCTTCEEEEECTTTB---TTB-CC-CS----GGGT---CS---EEEEESSSTTCCCSC--EEEEEE---
T ss_pred -HHHHHHHHHhhCCCCEEEEECCccc---cCc-ce-ec----cccC---ee---EEEecCcccccCCCc--eeEEEE---
Confidence 88999999999 999999999973 211 11 11 1111 23 778999996645444 799987
Q ss_pred CHHHHHH---------HH----HH--hhcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 369 SAEVREQ---------IY----KV--ASVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 369 ~~~~~~~---------l~----~~--~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++. +. .. .....+++...+.++..+++. .+++++.+++++++++.+.+.|++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 271 (352)
T 1iug_A 199 SPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG 271 (352)
T ss_dssp CHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7777654 22 11 113345677777666555543 1225677888888899998888764
No 112
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.92 E-value=4.6e-25 Score=215.57 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=183.6
Q ss_pred ccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCC-CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 013892 131 LDRSETQGLFSADSIERAWQILDQIPGRATGAYS-HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (434)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 209 (434)
+.|+.++...|+.+++++.+.+.. +.|+ ...+..++++++++++ |.+.++++|++|+|+++++..+++.
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~ 71 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRG------HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLAN 71 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCC------TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHT
T ss_pred ccCCCCCCCCCHHHHHHHhccccc------ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHH
Confidence 345566777889888876554422 1222 2245677788887776 5444578899999999999999998
Q ss_pred HhcCCCCEEEEcCCCChhH--HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 210 LIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
++ + |+|+++.|+|+.+ ...++..|++++.+++++ ++.+|+++|++.+++. ++++|++++|+||||.++
T Consensus 72 ~~-~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~ 141 (353)
T 2yrr_A 72 LD-R--GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLN 141 (353)
T ss_dssp CS-C--CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEEC
T ss_pred hc-C--CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceec
Confidence 86 4 8999999999875 455677899999999875 3579999999999762 588999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
+ +++|.++|+++|+++|+||+|.. +.. ..++. .++ .+ +++.|++|.+.|.+| +||+++
T Consensus 142 ~---~~~i~~l~~~~~~~li~D~a~~~---~~~--~~~~~----~~~---~d---~~~~s~~K~~~~~~g--~G~~~~-- 199 (353)
T 2yrr_A 142 P---AEAIGALAKEAGALFFLDAVTTL---GML--PFSMR----AMG---VD---YAFTGSQKCLSAPPG--LAPIAA-- 199 (353)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTT---TTS--CCCHH----HHT---CS---EEECCTTSTTCCCSS--CEEEEE--
T ss_pred C---HHHHHHHHHHcCCeEEEEcCccc---ccc--ccccc----ccC---ce---EEEecCcccccCCCc--eEEEEE--
Confidence 9 78999999999999999999963 221 12222 222 24 778899997756566 699987
Q ss_pred CCHHHHHHHH-------------HH--hh-cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEVREQIY-------------KV--AS-VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 368 ~~~~~~~~l~-------------~~--~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+. .. .. ...+++...+.++...++.. ..+++.+++++++++.+.+.|++.
T Consensus 200 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 274 (353)
T 2yrr_A 200 -SLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR 274 (353)
T ss_dssp -CHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC
Confidence 888887664 11 11 23356777766655555431 124567788888888888888764
No 113
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.92 E-value=3.9e-24 Score=215.95 Aligned_cols=271 Identities=15% Similarity=0.109 Sum_probs=177.9
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.+||++.+ +.+ .|+++++++.+.+.... .|....+..+.++++++++.+.++ .+.++|++|+|+++++
T Consensus 30 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~ 102 (430)
T 3i4j_A 30 RYLDGSSGALVANIGHGRAEVGERMAAQAARLP-----FVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEAT 102 (430)
T ss_dssp EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-----CCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHHH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhcc-----cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHH
Confidence 35666554 223 38999999999887632 344444566777788888877665 4567999999999999
Q ss_pred HHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCCe---------------EEEEecCCCC-CCCCCHHHHHHH
Q 013892 204 HMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGGT---------------LVPYYLDEAT-GWGLETSEVKKQ 260 (434)
Q Consensus 204 ~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~~---------------~~~~~~~~~~-~~~~d~~~l~~~ 260 (434)
..+++.++. .+++.|++.+|+|+.+...+...+.. +..++....- ....|+++|+++
T Consensus 103 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 182 (430)
T 3i4j_A 103 ESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRAL 182 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHH
Confidence 999998762 24689999999999887765554432 1122211100 001256889998
Q ss_pred HHHHHhcCCCeeEEEEecC-CC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCC
Q 013892 261 LEAAKAKGITVRALVVINP-GN-PTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGE 337 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p-~N-PtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~ 337 (434)
++.... .+++ +++++| +| ++|. +++.+++++|.++|++||+++|+||+|.++.+.+. +..+ ..+....
T Consensus 183 l~~~~~--~~~~-~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~--~~~~----~~~~~~~ 253 (430)
T 3i4j_A 183 LEREGP--ETVA-AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS--PLAL----SRWSGVT 253 (430)
T ss_dssp HHHHCG--GGEE-EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGG----GGTTTCC
T ss_pred HHhcCC--CCEE-EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc--hhhh----hhhcCCC
Confidence 875310 1444 455555 66 8887 66888899999999999999999999999765543 2222 1110122
Q ss_pred CCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH-----hhcccCCchHHHHHHHHHcCCCCCChHHHHHH
Q 013892 338 KDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESY 411 (434)
Q Consensus 338 ~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 411 (434)
++ ++ +|||+| + .| +|+||+++ ++++++.+.+. ...+.+.++++|.++..+++..+. ++..+++
T Consensus 254 ~d--i~---t~sK~l-~-~G~~r~G~~~~---~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~ 322 (430)
T 3i4j_A 254 PD--IA---VLGKGL-A-AGYAPLAGLLA---APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER-EDLTGAA 322 (430)
T ss_dssp CS--EE---EECGGG-T-TTSSCCEEEEE---CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHH
T ss_pred Cc--EE---EEcccc-c-CCccccEEEEE---CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc-ccHHHHH
Confidence 44 22 689999 5 49 99999988 99999999873 335568899999988888863211 3567777
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 412 CAERDGILSSLARRA 426 (434)
Q Consensus 412 ~~~r~~l~~~L~~~~ 426 (434)
+++++.+++.|++..
T Consensus 323 ~~~~~~~~~~l~~~~ 337 (430)
T 3i4j_A 323 KERGAQLLAGLQALQ 337 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888888887764
No 114
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.92 E-value=2.9e-24 Score=210.17 Aligned_cols=256 Identities=14% Similarity=0.108 Sum_probs=172.9
Q ss_pred cccccc-CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 013892 131 LDRSET-QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (434)
Q Consensus 131 l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 209 (434)
++|+.+ ...+++.+++++.+... ....|.+..+..+|++++++++ | .+++++++|+++++.+++.+
T Consensus 6 i~~~~~~~~~p~~~~~~a~~~~~~-----~~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~gt~a~~~~~~~ 72 (347)
T 1jg8_A 6 IDLRSDTVTKPTEEMRKAMAQAEV-----GDDVYGEDPTINELERLAAETF----G----KEAALFVPSGTMGNQVSIMA 72 (347)
T ss_dssp EECSCGGGCCCCHHHHHHHHTCCC-----CCGGGTCCHHHHHHHHHHHHHH----T----CSEEEEESCHHHHHHHHHHH
T ss_pred EEeccccCCCCCHHHHHHHhcCCC-----CCcccCCChHHHHHHHHHHHHh----C----CceEEEecCcHHHHHHHHHH
Confidence 455444 22245666666543211 1346888888999999999997 2 24678888888999999988
Q ss_pred HhcCCCCEEEEcCCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-cc
Q 013892 210 LIRSENDGILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQ 285 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~ 285 (434)
++ ++||+|+++.|+|.... ..++..|++++.+ .++ ++.+|+++|++++++....+.++++|++++||||| |.
T Consensus 73 ~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~ 148 (347)
T 1jg8_A 73 HT-QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR 148 (347)
T ss_dssp HC-CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred hc-CCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCc
Confidence 88 79999999999997643 3567789999988 432 35689999999885310001258999999999999 99
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCc--cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeE-E
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENV--YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGG-Y 362 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~--~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G-~ 362 (434)
+++.+++++|+++|+++|+++|+||+|.... +.+. +...+... -+ +++.|+||.+ |.+ +| |
T Consensus 149 ~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~-----~d---~~~~s~sK~l-~~~---~G~~ 212 (347)
T 1jg8_A 149 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV----PVKEYAGY-----AD---SVMFCLSKGL-CAP---VGSV 212 (347)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC----CHHHHHHT-----CS---EEEEESSSTT-CCS---SCEE
T ss_pred cCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC----ChHHhccc-----cc---EEEEeccccc-CCC---ceEE
Confidence 9999999999999999999999999875311 1121 11122111 22 2344899998 432 56 4
Q ss_pred EEEecCCHHHHHHHHHHhh-cc--cCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKVAS-VN--LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~~-~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++. ++++++.+.+++. .. ...+.+.+.++...++.. .+. .++..++++.+.+.|++.
T Consensus 213 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~-~~~~~~~~~~l~~~L~~~ 272 (347)
T 1jg8_A 213 VVG---DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM--VDR-LKEDHENARFLALKLKEI 272 (347)
T ss_dssp EEE---CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS--STT-HHHHHHHHHHHHHHHHHH
T ss_pred EEc---CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHHHHHhc
Confidence 544 8888888876654 22 223445555555555431 122 333446778888888765
No 115
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.92 E-value=3.1e-23 Score=209.12 Aligned_cols=195 Identities=16% Similarity=0.126 Sum_probs=160.0
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCC-CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSH-SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
..|+.+++++.+.+... .|++ ..|..++++++++++. .+++++|+|+++++..++.++. +||+
T Consensus 29 ~~p~~~~~a~~~~~~~~------~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l~~l~--~gd~ 92 (424)
T 2po3_A 29 IDRARLYERLDRALDSQ------WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLAHAAG--LTGE 92 (424)
T ss_dssp CCHHHHHHHHHHHHHHT------CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHHT--CCSE
T ss_pred CChHHHHHHHHHHHhcC------CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcC--CCCE
Confidence 44678888888887652 3777 7889999999999982 2589999999999999999984 7899
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|+++.|+|+.+...++..|++++.+++++ ++|.+|+++|++++++ ++++|+++| |||...+ +++|.+
T Consensus 93 Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~---~tG~~~~---l~~i~~ 159 (424)
T 2po3_A 93 VIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTP------RTSAVVGVH---LWGRPCA---ADQLRK 159 (424)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCT------TEEEEEEEC---GGGCCCC---HHHHHH
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCc------CCcEEEEEC---CCCCcCC---HHHHHH
Confidence 99999999999999999999999999875 3578999999998865 789998864 8999866 899999
Q ss_pred HHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC-HHHHHH
Q 013892 298 FCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS-AEVREQ 375 (434)
Q Consensus 298 ~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~-~~~~~~ 375 (434)
+|+++|++||+||+|. ++.+++. + + . ...| |++.||||.. +++|.|+||+++ + +++++.
T Consensus 160 la~~~~~~li~Dea~~~g~~~~~~-~---~-------~-~~~d---i~~~S~sk~K-~l~~~~~G~~v~---~~~~l~~~ 220 (424)
T 2po3_A 160 VADEHGLRLYFDAAHALGCAVDGR-P---A-------G-SLGD---AEVFSFHATK-AVNAFEGGAVVT---DDADLAAR 220 (424)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTE-E---T-------T-SSSS---EEEEECCTTS-SSCCSSCEEEEE---SCHHHHHH
T ss_pred HHHHcCCEEEEECccccCCeECCe-e---c-------c-cccC---EEEEeCCCCC-CccCCCCeEEEe---CCHHHHHH
Confidence 9999999999999999 5655432 1 1 1 1134 8899999555 556799999987 6 899988
Q ss_pred HHHHhh
Q 013892 376 IYKVAS 381 (434)
Q Consensus 376 l~~~~~ 381 (434)
+.....
T Consensus 221 l~~~~~ 226 (424)
T 2po3_A 221 IRALHN 226 (424)
T ss_dssp HHHHHB
T ss_pred HHHHHh
Confidence 876643
No 116
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.92 E-value=8.4e-25 Score=217.88 Aligned_cols=257 Identities=10% Similarity=0.063 Sum_probs=183.5
Q ss_pred CCccccccc--CCC---CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET--QGL---FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~--~~~---~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..++|++.+ +.. .++.+.+++.+.+..... ....|. ..-..++++.+++++ | ++++++|+|++++
T Consensus 36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~~gt~a 105 (392)
T 3ruy_A 36 NRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTL-TSRAFH-SDQLGPWYEKVAKLT----N----KEMVLPMNTGAEA 105 (392)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC-CCTTSE-ETTHHHHHHHHHHHH----T----CSEEEEESSHHHH
T ss_pred CEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccc-cccccC-CHHHHHHHHHHHHhc----C----CCEEEEeCcHHHH
Confidence 446777766 211 479999999988876432 111122 223566666666665 3 6799999999999
Q ss_pred HHHHHHHHhcC---------CCCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCCCCCCHHHHHHH
Q 013892 203 VHMMMQLLIRS---------ENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 203 l~~~l~~l~~~---------~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
+..+++.+... .+|+|+++.|+|+.+...+...+.. +..++. .|+++|+++
T Consensus 106 ~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 178 (392)
T 3ruy_A 106 VETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAA 178 (392)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHH
Confidence 99999887621 2679999999998766555444322 444432 279999999
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQVLAEEN-QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~-l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
+++ ++++|++++|+||||.+++.++ +++|.++|++||+++|+||+|.++.+.+. ..... ..+ ..+|
T Consensus 179 l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~--~~~~~----~~~-~~~d 245 (392)
T 3ruy_A 179 ITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK--VFACD----WDN-VTPD 245 (392)
T ss_dssp CCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS--SSGGG----GGT-CCCS
T ss_pred hcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc--chhhh----ccC-CCCC
Confidence 875 8999999999999999996655 99999999999999999999998665543 22111 111 2244
Q ss_pred ceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
++ ||||.++ +| +|+||+++ ++++++.+..... ...+.+.+++.++...++..+. ++.+++++++++.
T Consensus 246 --~~---~~SK~l~--gG~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~ 314 (392)
T 3ruy_A 246 --MY---ILGKALG--GGVFPISCAAA---NRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE-EKLTERSLQLGEK 314 (392)
T ss_dssp --EE---EECGGGG--TTTSCCEEEEE---CHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHH
T ss_pred --EE---EEchhhh--CChhhhEEEEE---CHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHH
Confidence 33 7789884 36 99999987 8888887765543 4557889999988888764322 4667788888888
Q ss_pred HHHHHHHH
Q 013892 418 ILSSLARR 425 (434)
Q Consensus 418 l~~~L~~~ 425 (434)
+.+.|++.
T Consensus 315 l~~~L~~~ 322 (392)
T 3ruy_A 315 LVGQLKEI 322 (392)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHHh
Confidence 88877654
No 117
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=2e-24 Score=214.44 Aligned_cols=254 Identities=11% Similarity=0.074 Sum_probs=183.1
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 129 SILDRSETQGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 129 ~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
..+.++.++..+|+.+++++.+.+ ...|.+ .....++++.+++++ |.+ .+++|++|+|+++++..+
T Consensus 23 ~~~~~~p~p~~~~~~v~~a~~~~~-------~~~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~gg~~al~~~ 90 (393)
T 3kgw_A 23 TRLLLGPGPSNLAPRVLAAGSLRM-------IGHMQKEMLQIMEEIKQGIQYVF----QTR-NPLTLVVSGSGHCAMETA 90 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTCCC-------CCTTSHHHHHHHHHHHHHHHHHH----TCC-CSEEEEESCCTTTHHHHH
T ss_pred cceeccCCCCCCCHHHHHHhcccc-------cCcccHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEeCCcHHHHHHH
Confidence 344566667788998887764321 112221 122345555555554 532 334699999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 207 MQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 207 l~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
++.++ ++||+|+++.++|.. +...++..|++++.++++++ +.+|+++|++++++. ++++|++++|+||||
T Consensus 91 ~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG 162 (393)
T 3kgw_A 91 LFNLL-EPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQH-----KPVLLFLVHGESSTG 162 (393)
T ss_dssp HHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTT
T ss_pred HHhcC-CCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhC-----CCcEEEEeccCCcch
Confidence 99998 799999999998853 36778889999999998754 478999999999875 789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.+++ +++|.++|+++|+++|+||+|...... ..+ ... .. .+++.|+||.++|.+| +||++
T Consensus 163 ~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~-----~~~----~~~---~~---d~~~~s~sK~~~~~~g--~g~~~ 222 (393)
T 3kgw_A 163 VVQP---LDGFGELCHRYQCLLLVDSVASLGGVP-----IYM----DQQ---GI---DIMYSSSQKVLNAPPG--ISLIS 222 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTTTTSC-----CCT----TTT---TC---CEEEEESSSTTCCCSS--CEEEE
T ss_pred hhcc---HHHHHHHHHHcCCEEEEECCccccCcc-----cch----hhc---CC---CEEEecCcccccCCCc--eeEEE
Confidence 9999 889999999999999999998732111 110 000 12 2778899998865444 89998
Q ss_pred EecCCHHHHHHHHHHhh------------------------cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHH
Q 013892 365 VTGFSAEVREQIYKVAS------------------------VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGI 418 (434)
Q Consensus 365 ~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l 418 (434)
+ ++++++.+..... ....++...+.++...++. .+.+++..++++++++.+
T Consensus 223 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 299 (393)
T 3kgw_A 223 F---NDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHL 299 (393)
T ss_dssp E---CHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred E---CHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7 8999988865321 1234566666666555542 123567788888899999
Q ss_pred HHHHHHH
Q 013892 419 LSSLARR 425 (434)
Q Consensus 419 ~~~L~~~ 425 (434)
.+.|++.
T Consensus 300 ~~~L~~~ 306 (393)
T 3kgw_A 300 HKHLQEM 306 (393)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9888876
No 118
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.92 E-value=2.8e-24 Score=214.98 Aligned_cols=258 Identities=10% Similarity=0.035 Sum_probs=186.8
Q ss_pred CCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCC-EEEcCChHHHHH
Q 013892 126 DHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPND-IFLTDGASPAVH 204 (434)
Q Consensus 126 ~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-i~~t~G~~~al~ 204 (434)
..|..+.++.+|..+++.+++++.+.+ ...|. .+..++.+.+.+++.+.+|. +.++ +++|+|+++++.
T Consensus 10 ~~~~~~~~~pgp~~~~~~v~~a~~~~~-------~~~~~--~~~~~~~~~~~~~la~~~~~--~~~~~v~~~~sgt~al~ 78 (411)
T 3nnk_A 10 NPPSRLLMGPGPINADPRVLRAMSSQL-------IGQYD--PAMTHYMNEVMALYRGVFRT--ENRWTMLVDGTSRAGIE 78 (411)
T ss_dssp CCCCCEEESSSCCCCCHHHHHHHTSCC-------CCTTC--HHHHHHHHHHHHHHHHHHTC--CCSEEEEEESCHHHHHH
T ss_pred CCccceeecCCCCCCCHHHHHHhhccc-------ccccc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEECCCcHHHHH
Confidence 345566677778888999887764321 12222 22333444444444444453 3444 888999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 205 MMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 205 ~~l~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
.++..++ ++||+|+++.|+|+. +...++..|++++.++++. ++.+|+++|++++++. ++++|++++|+||
T Consensus 79 ~~~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~np 150 (411)
T 3nnk_A 79 AILVSAI-RPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPW--GEVFTPDQVEDAVKRI-----RPRLLLTVQGDTS 150 (411)
T ss_dssp HHHHHHC-CTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETT
T ss_pred HHHHHhc-CCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHhhC-----CCeEEEEeCCCCC
Confidence 9999998 799999999999977 8889999999999999854 4578999999999864 7999999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.+.+ +++|.++|+++|+++|+||+|...... ..+ ... .. .+++.|++|.+.| +.++||
T Consensus 151 tG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-----~~~----~~~---~~---d~~~~s~~K~l~~--~~g~g~ 210 (411)
T 3nnk_A 151 TTMLQP---LAELGEICRRYDALFYTDATASLGGNP-----LET----DVW---GL---DAVSAGMQKCLGG--PSGTSP 210 (411)
T ss_dssp TTEECC---CTTHHHHHHHHTCEEEEECTTTBTTBC-----CCT----TTT---TC---SEEECCSTTTTCC--CSSEEE
T ss_pred cceecc---HHHHHHHHHHcCCEEEEECCcccCCcc-----cch----hcc---CC---cEEEecCccccCC--CCceEE
Confidence 999998 889999999999999999998642211 111 000 12 2789999998645 446899
Q ss_pred EEEecCCHHHHHHHHHHh------------------------------------h-cccCCchHHHHHHHHHcCCC-C-C
Q 013892 363 MEVTGFSAEVREQIYKVA------------------------------------S-VNLCSNISGQILASLVMSPP-K-V 403 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~------------------------------------~-~~~~~~~~~q~~~~~~l~~~-~-~ 403 (434)
+++ ++++++.+.... . ...+++...+.++...++.. + .
T Consensus 211 ~~~---~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g 287 (411)
T 3nnk_A 211 ITL---SARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEG 287 (411)
T ss_dssp EEE---CHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEE---CHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 988 899998887643 0 12345666666655555431 1 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++.+++++++++.+.+.|++.
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~ 309 (411)
T 3nnk_A 288 LDYGIARHKLHGDALVKGIQAM 309 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4567788888888888888764
No 119
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=1e-23 Score=209.69 Aligned_cols=237 Identities=15% Similarity=0.164 Sum_probs=178.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~Vl 219 (434)
++++++++.+.+... ...|.+..+..++++++++++ | . .++|++++| ++++.+++..+ + ++||+|+
T Consensus 16 ~~~~~~a~~~~l~~~----~~~~~~~~~~~~l~~~la~~~----~--~-~~~i~~~sG-t~al~~~l~~l~~-~~gd~Vi 82 (388)
T 1b9h_A 16 DDAERNGLVRALEQG----QWWRMGGDEVNSFEREFAAHH----G--A-AHALAVTNG-THALELALQVMGV-GPGTEVI 82 (388)
T ss_dssp CHHHHHHHHHHHHTS----CCBTTTCSHHHHHHHHHHHHT----T--C-SEEEEESCH-HHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHHcC----CeeecCCHHHHHHHHHHHHHh----C--C-CeEEEeCCH-HHHHHHHHHHcCC-CCcCEEE
Confidence 488999999988763 235777788999999999997 3 1 256777777 89999999998 6 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.|+|+.+...++..|++++.++++++ +|.+|+++|++++++ ++++|+ |+||||.+.+ +++|.++|
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la 149 (388)
T 1b9h_A 83 VPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKIS 149 (388)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHH
Confidence 9999999999999999999999999764 578999999999865 688777 9999999987 89999999
Q ss_pred HHcCCEEEEccCCCCC-ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH-H--HHH
Q 013892 300 KKEGLVLLADEVYQEN-VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE-V--REQ 375 (434)
Q Consensus 300 ~~~~~~li~Deay~~~-~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~-~--~~~ 375 (434)
+++|+++|+|++|..+ .+.+. .+ ..+ . .|.+.||||.. +++|.|+||+++ +++ + ++.
T Consensus 150 ~~~~~~li~D~a~~~g~~~~~~----~~----~~~----~---~i~~~S~s~~K-~l~g~~~G~~~~---~~~~~~~~~~ 210 (388)
T 1b9h_A 150 ADTGVPLLQDAAHAHGARWQGK----RV----GEL----D---SIATFSFQNGK-LMTAGEGGAVVF---PDGETEKYET 210 (388)
T ss_dssp HHHTCCBCEECTTCTTCEETTE----EG----GGS----S---SCEEEECCTTS-SSCSSSCEEEEE---CTTCHHHHHH
T ss_pred HHcCCEEEEecchhcCCccCCe----ec----ccc----c---ceEEEEccCCC-cccCCCeEEEEE---CCHHHHHHHH
Confidence 9999999999999863 33221 11 111 1 27788999666 566789999987 443 5 566
Q ss_pred HHHHhhc--------------cc--CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 376 IYKVASV--------------NL--CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 376 l~~~~~~--------------~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+...... .. ..+.+..+++...+ +++++.+++++++++.+.+.|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~---~~l~~~~~~~~~~~~~l~~~L~~~ 273 (388)
T 1b9h_A 211 AFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL---ARLDEQIAVRDERWTLLSRLLGAI 273 (388)
T ss_dssp HHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccC
Confidence 6543321 01 13444333333333 345667778888888888888754
No 120
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.92 E-value=6.7e-25 Score=220.57 Aligned_cols=248 Identities=15% Similarity=0.156 Sum_probs=172.8
Q ss_pred CCCHHHHHHHHHHHH--cCCCCCCC-CCCC----CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh
Q 013892 139 LFSADSIERAWQILD--QIPGRATG-AYSH----SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~--~~~~~~~~-~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~ 211 (434)
..|+.+++++.+.+. ........ .|.. ..+..++++.+++++ | +++++|++|+|+++++..+++++.
T Consensus 33 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~~~~~v~~~~ggt~a~~~a~~~l~ 106 (423)
T 3lvm_A 33 PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV----G--ADPREIVFTSGATESDNLAIKGAA 106 (423)
T ss_dssp CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc----C--CCCCeEEEeCChHHHHHHHHHHHH
Confidence 468888888877665 21110000 1111 123455666666665 4 467899999999999999999886
Q ss_pred c---CCCCEEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 212 R---SENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 212 ~---~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
. ++||+|+++.|+|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.
T Consensus 107 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~ 178 (423)
T 3lvm_A 107 NFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD------DTILVSIMHVNNEIGV 178 (423)
T ss_dssp HHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT------TEEEEECCSBCTTTCB
T ss_pred HhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC------CcEEEEEeCCCCCCcc
Confidence 1 3799999999999998877744 499999999875 468899999999876 7899999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+++ +++|+++|+++|++||+||+|....+. ... ..+ ..+ +++.|+||.+ |.+| +||+++
T Consensus 179 ~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-----~~~----~~~---~~d---i~~~s~sK~~-g~~g--~G~~~~ 237 (423)
T 3lvm_A 179 VQD---IAAIGEMCRARGIIYHVDATQSVGKLP-----IDL----SQL---KVD---LMSFSGHKIY-GPKG--IGALYV 237 (423)
T ss_dssp BCC---HHHHHHHHHHHTCEEEEECTTTTTTSC-----CCT----TTS---CCS---EEEEESTTTT-SCSS--CEEEEE
T ss_pred ccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-----cCh----hhc---CCC---EEEechHHhc-CCCC--eEEEEE
Confidence 999 888999999999999999998753221 111 111 123 7889999977 6666 899987
Q ss_pred ecCCHHHHHHHHHHh--------hcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYKVA--------SVNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 366 ~~~~~~~~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
+++.++.+.... .....++...+.++...+... +.+++.+++++++++.+.+.|++
T Consensus 238 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 302 (423)
T 3lvm_A 238 ---RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD 302 (423)
T ss_dssp ---CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555554443321 123345666666554444321 12355666677777777776654
No 121
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.92 E-value=2e-24 Score=212.06 Aligned_cols=253 Identities=11% Similarity=0.048 Sum_probs=180.5
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC--CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSH--SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 209 (434)
+++.++...|+++++++.+.+ .+.|+. ..+..++++++++++ |.+.+++++++|+|+++++..++++
T Consensus 7 ~~~~gp~~~~~~v~~a~~~~~-------~~~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~~~g~t~a~~~~~~~ 75 (366)
T 1m32_A 7 LLTPGPLTTSRTVKEAMLFDS-------CTWDDDYNIGVVEQIRQQLTALA----TASEGYTSVLLQGSGSYAVEAVLGS 75 (366)
T ss_dssp ECSSSSCCCCHHHHHTTCCCC-------CTTSHHHHTTTHHHHHHHHHHHH----CSSSSEEEEEEESCHHHHHHHHHHH
T ss_pred cccCCCcCCCHHHHHHHhhhh-------cCCCHHHHHHHHHHHHHHHHHHh----CCCCcCcEEEEecChHHHHHHHHHH
Confidence 344444456788887765421 112221 167899999999998 3222345899999999999999999
Q ss_pred HhcCCCCEEEEcC-CCChh-HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 210 LIRSENDGILCPI-PQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 210 l~~~~gd~Vlv~~-p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
++ .+||+|+++. ++|+. +...++..|++++.++++. ++.+|+++|++++++. .++++|++++|+||||.++
T Consensus 76 ~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~ 148 (366)
T 1m32_A 76 AL-GPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNAD----PTISHIAMVHSETTTGMLN 148 (366)
T ss_dssp SC-CTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHC----TTCCEEEEESEETTTTEEC
T ss_pred hc-CCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcC----CCeEEEEEecccCCcceec
Confidence 98 6999988776 66654 6677888999999999864 3579999999999761 1478999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
+ +++|.++|+++|+++|+||+|...... .++ ..+ ..+ +++.|+||.+.|. .++||+++
T Consensus 149 ~---l~~i~~l~~~~~~~li~Dea~~~~~~~-----~~~----~~~---~~d---i~~~s~~K~~~~~--~g~G~~~~-- 206 (366)
T 1m32_A 149 P---IDEVGALAHRYGKTYIVDAMSSFGGIP-----MDI----AAL---HID---YLISSANKCIQGV--PGFAFVIA-- 206 (366)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTTTTSC-----CCT----TTT---TCS---EEEEESSSTTCCC--SSEEEEEE--
T ss_pred C---HHHHHHHHHHcCCEEEEECCccccCcC-----ccc----ccc---Ccc---EEEecCcccccCC--CceEEEEE--
Confidence 9 889999999999999999999853221 111 111 123 8899999987543 34699987
Q ss_pred CCHHHHHHHHHHh------------------h-cccCCchHHHHHHHHHcCCC-CC--ChHHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEVREQIYKVA------------------S-VNLCSNISGQILASLVMSPP-KV--GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 368 ~~~~~~~~l~~~~------------------~-~~~~~~~~~q~~~~~~l~~~-~~--~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+.... . ...+++...+.++...++.. ++ +++.+++++++++.+.+.|++.
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 207 -REQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL 285 (366)
T ss_dssp -EHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC
Confidence 778776654320 0 02356777776666665432 12 3567778888888888888764
No 122
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=1.3e-24 Score=219.27 Aligned_cols=249 Identities=14% Similarity=0.133 Sum_probs=164.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCc----chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQ----GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-- 212 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-- 212 (434)
..|+.+++++.+.+..........|.... ...++|+++++++ | +++++|++|+|+++++..++..+++
T Consensus 29 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~~~~~~~~~ 102 (432)
T 3a9z_A 29 PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMI----G--GKPQDIIFTSGGTESNNLVIHSTVRCF 102 (432)
T ss_dssp CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEeCChHHHHHHHHHHHHhhh
Confidence 45888999998888753210112232211 2457888888876 4 4678999999999999999998851
Q ss_pred -----CCCCEEEEcCCCChhH-----------------HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 213 -----SENDGILCPIPQYPLY-----------------SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 213 -----~~gd~Vlv~~p~y~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
++||+|+++.|+|..| ....+..|++++.++++++ ++.+|+++|++++++ +
T Consensus 103 ~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~i~~------~ 175 (432)
T 3a9z_A 103 HEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQVEVEDILAAVRP------T 175 (432)
T ss_dssp HHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSSCCHHHHHHTCCT------T
T ss_pred hhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCCcCHHHHHHhccC------C
Confidence 3899999999999765 3344557999999998752 347899999998875 7
Q ss_pred eeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKEG----------LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~----------~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
+++|++++|+||||.+++ +++|.++|+++| +++|+||+|..+. . ..++. .+. .|
T Consensus 176 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~---~--~~~~~----~~~---~d- 239 (432)
T 3a9z_A 176 TCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK---R--RVDVE----DLG---VD- 239 (432)
T ss_dssp EEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT---S--CCCHH----HHC---CS-
T ss_pred ceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC---c--ccChh----hcC---CC-
Confidence 999999999999999999 677889999999 9999999997632 1 12222 122 34
Q ss_pred eEEEEecCCCCCCCCCCceeEEEEEecCCHHH-HHHHHHH-------hh-cccCCchHHHHHHHHHcCC-CCCChHHHHH
Q 013892 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV-REQIYKV-------AS-VNLCSNISGQILASLVMSP-PKVGDESYES 410 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~-~~~l~~~-------~~-~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~ 410 (434)
+++.|+||.+ |.|+||+++ ++++ ...+... .. ...+++..++.++..+++. .+.+++..++
T Consensus 240 --~~~~s~~K~~----g~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~ 310 (432)
T 3a9z_A 240 --FLTIVGHKFY----GPRIGALYV---RGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAH 310 (432)
T ss_dssp --EEEEEGGGTT----CCSCEEEEE---TTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --EEEEehhHhc----CCcceEEEE---ccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5689999965 457999987 5443 2222211 11 2235677777666555542 1234567788
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 411 YCAERDGILSSLARR 425 (434)
Q Consensus 411 ~~~~r~~l~~~L~~~ 425 (434)
++++++.+.+.|++.
T Consensus 311 ~~~~~~~l~~~L~~~ 325 (432)
T 3a9z_A 311 MRDIRDYLEERLEAE 325 (432)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 888888888888875
No 123
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.91 E-value=2.9e-24 Score=212.57 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=176.0
Q ss_pred ccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC----cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 131 LDRSETQGLFSADSIERAWQILDQIPGRATGAYSHS----QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~----~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
+|++.+. ..|+.+++++.+.+.+........|... .+..++++++++++ | +++++|++|+|+++++..+
T Consensus 4 ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~~~ 76 (382)
T 4eb5_A 4 FDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV----N--GGGGTVVFTSGATEANNLA 76 (382)
T ss_dssp CBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--CTTEEEEEESSHHHHHHHH
T ss_pred eccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEcCchHHHHHHH
Confidence 3443333 6789999999998875321111125432 34566777777776 4 4568999999999999999
Q ss_pred HHHHh---cCCCCEEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 207 MQLLI---RSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 207 l~~l~---~~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+.++. .++||+|+++.|+|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+
T Consensus 77 ~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~ 148 (382)
T 4eb5_A 77 IIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHAN 148 (382)
T ss_dssp HHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBC
T ss_pred HHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcC------CCeEEEEeccC
Confidence 99886 14899999999999988777654 699999999875 457999999998875 78999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
||||.+++ +++|.++|+++|++ |+||+|.. +.. ...+. .++ .+ +++.|+||.+ |.+| +
T Consensus 149 nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~---g~~--~~~~~----~~~---~d---i~~~s~sK~~-g~~g--~ 206 (382)
T 4eb5_A 149 NEIGTIQP---VEEISEVLAGKAAL-HIDATASV---GQI--EVDVE----KIG---AD---MLTISSNDIY-GPKG--V 206 (382)
T ss_dssp TTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB---TTB--CCCHH----HHT---CS---EEEEETGGGT-CCSS--C
T ss_pred CCccccCC---HHHHHHHHHHCCCE-EEEcchhc---CCc--ccCcc----ccC---CC---EEEeehHHhc-CCCc--e
Confidence 99999999 78999999999999 99999983 221 11221 122 23 7899999986 7666 6
Q ss_pred EEEEEecCCHHH-HHHHHH-----HhhcccCCchHHHHHHHHHcCCC-CCChHHHHHHHHHHHHHHHHHHH
Q 013892 361 GYMEVTGFSAEV-REQIYK-----VASVNLCSNISGQILASLVMSPP-KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 361 G~~~~~~~~~~~-~~~l~~-----~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
||+++ +++. +..+.. .......++...+.++...++.. +.+++.+++++++++.+.+.|++
T Consensus 207 G~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4eb5_A 207 GALWI---RKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp EEEEE---ETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEE---ccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 88876 3331 111100 01122345555555554444321 12345666777777777777765
No 124
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.91 E-value=2.4e-23 Score=208.27 Aligned_cols=213 Identities=19% Similarity=0.263 Sum_probs=165.6
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~Vl 219 (434)
++.+++++.+.+.. ..|.+..+..++++++++++ | .+++++++|+++++..+++.+ + ++||+|+
T Consensus 43 ~~~v~~a~~~~~~~------~~y~~~~~~~~l~~~la~~~----~----~~~~v~~~~Gt~a~~~~l~~~~~-~~gd~vl 107 (399)
T 2oga_A 43 RAETDAAIARVLDS------GRYLLGPELEGFEAEFAAYC----E----TDHAVGVNSGMDALQLALRGLGI-GPGDEVI 107 (399)
T ss_dssp HHHHHHHHHHHHHH------TCCSSSHHHHHHHHHHHHHT----T----SSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred CHHHHHHHHHHHhc------CCCCCchhHHHHHHHHHHHH----C----CCeEEEecCHHHHHHHHHHHhCC-CCcCEEE
Confidence 47788888887764 24767788999999999997 2 125777778899999999998 7 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.|+|+.+...++..|++++.++++++ +|.+|+++|++++++ ++++|+ |+||||.+.+ +++|.++|
T Consensus 108 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~l~ 174 (399)
T 2oga_A 108 VPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITP------RTRALL---PVHLYGHPAD---MDALRELA 174 (399)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCC------CCeEEE---EeCCcCCccC---HHHHHHHH
Confidence 9999999999999999999999998753 578999999998875 688777 5789999988 89999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+++|+++|+||+|..+...+... +. ...+ +++.|+ ||.| |.+| |+||+++ .++++++.+.
T Consensus 175 ~~~~~~li~Dea~~~g~~~~~~~----------~~-~~~d---i~~~S~~~sK~~-~~~G-~~g~~~~--~~~~~~~~l~ 236 (399)
T 2oga_A 175 DRHGLHIVEDAAQAHGARYRGRR----------IG-AGSS---VAAFSFYPGKNL-GCFG-DGGAVVT--GDPELAERLR 236 (399)
T ss_dssp HHHTCEECEECTTCTTCEETTEE----------TT-CTTC---EEEEECCTTSSS-CCSS-CCEEEEE--SCHHHHHHHH
T ss_pred HHcCCEEEEECcccccCccCCee----------cc-cccC---EEEEeCCCCccC-CcCC-ceEEEEe--CCHHHHHHHH
Confidence 99999999999998753222111 11 1123 788898 7999 7679 9999976 3488988887
Q ss_pred HHhhcc-------------cCCchHHHHHHHHHcC
Q 013892 378 KVASVN-------------LCSNISGQILASLVMS 399 (434)
Q Consensus 378 ~~~~~~-------------~~~~~~~q~~~~~~l~ 399 (434)
...... ...+.+.++++...++
T Consensus 237 ~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~ 271 (399)
T 2oga_A 237 MLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLA 271 (399)
T ss_dssp HHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHH
T ss_pred HHHhcCccccccccccccCCCcCHHHHHHHHHHHH
Confidence 654321 1346666666665553
No 125
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.91 E-value=3.4e-23 Score=205.61 Aligned_cols=243 Identities=13% Similarity=0.087 Sum_probs=176.4
Q ss_pred cceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHH
Q 013892 98 EILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIA 177 (434)
Q Consensus 98 ~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 177 (434)
+++++++|.|.. .+|+.+++++. . |. +...+.+.++
T Consensus 29 ~v~~~~~~~~~~-----------------------------~~~~~v~~a~~----~--------~~---~~~~~~~~~~ 64 (374)
T 2aeu_A 29 ALYDLSGLSGGF-----------------------------LIDEKDKALLN----T--------YI---GSSYFAEKVN 64 (374)
T ss_dssp GCEECSSCCCCC-----------------------------CCCHHHHHHHT----S--------TT---HHHHHHHHHH
T ss_pred ceeeecccCCCC-----------------------------CCCHHHHHHHH----H--------hc---CchHHHHHHH
Confidence 689999988665 45788887763 1 11 1234556777
Q ss_pred HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCH
Q 013892 178 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 178 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
+++.+.+|.. +++++++++|+++++..++..+ +||+|+++.|+|+.+.. .++..|++++.+ .|+
T Consensus 65 ~~~a~~~g~~-~~~~~~~~~ggt~a~~~~~~~~---~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~ 131 (374)
T 2aeu_A 65 EYGLKHLGGD-ENDKCVGFNRTSSAILATILAL---KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKV 131 (374)
T ss_dssp HHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHH---CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCH
T ss_pred HHHHHHhCCC-CcceEEEEcChHHHHHHHHHhC---CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCH
Confidence 7766666643 4578999999999999999977 79999999997765333 677889999887 268
Q ss_pred HHHHHHHHHHHhcCCCeeE-EEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhh
Q 013892 255 SEVKKQLEAAKAKGITVRA-LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~-i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l 333 (434)
++|+++ ++ ++++ |++++|+||||. +..++++|.++|+++|+++|+||+|..+..+... ..+... +
T Consensus 132 ~~l~~~-~~------~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~----~ 197 (374)
T 2aeu_A 132 GEILNK-ID------KDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFN-QPPALK----L 197 (374)
T ss_dssp HHHHTT-CC------TTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTT-CCCHHH----H
T ss_pred HHHHhc-CC------CccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccc-cCCccc----c
Confidence 888776 32 7899 899999999997 7788999999999999999999999875311110 011111 1
Q ss_pred CCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHH
Q 013892 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYC 412 (434)
Q Consensus 334 ~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 412 (434)
+ .+ ++++|+||.+ +|+|+||+++ ++++++.+..... ...+++.+.+.++...++... .+.++.+.
T Consensus 198 ~---~d---i~~~S~sK~l---~g~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~ 263 (374)
T 2aeu_A 198 G---AD---LVVTSTDKLM---EGPRGGLLAG---KKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFN--LERIRKAF 263 (374)
T ss_dssp T---CS---EEEEETTSSS---SSCSCEEEEE---EHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCC--HHHHHHHH
T ss_pred C---Cc---EEEecCcccc---cCcceEEEEE---CHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHh--HHHHHHHH
Confidence 2 23 7889999986 4789999987 8899999987765 344678888888887776431 22445555
Q ss_pred HHHHHH----HHHHHHH
Q 013892 413 AERDGI----LSSLARR 425 (434)
Q Consensus 413 ~~r~~l----~~~L~~~ 425 (434)
++++.+ ++.|.+.
T Consensus 264 ~~~~~~~~~~~~~l~~~ 280 (374)
T 2aeu_A 264 ERAKNFDLSKIEKLNKE 280 (374)
T ss_dssp HHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 555555 5666554
No 126
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.91 E-value=1.2e-23 Score=210.67 Aligned_cols=256 Identities=9% Similarity=0.064 Sum_probs=182.3
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEE-EcCChHHHHHHH
Q 013892 128 PSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF-LTDGASPAVHMM 206 (434)
Q Consensus 128 p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~-~t~G~~~al~~~ 206 (434)
+..+.+..+|..+++.+++++.+ . ....|.+ ...++.+.+.+++.+.+| .++++++ +++|+++++..+
T Consensus 10 ~~~~~~~p~p~~~~~~v~~a~~~----~---~~~~~~~--~~~~~~~~l~~~la~~~g--~~~~~~~~~~~s~t~al~~~ 78 (416)
T 3isl_A 10 PLRTIMTPGPVEVDPRVLRVMST----P---VVGQFDP--AFTGIMNETMEMLRELFQ--TKNRWAYPIDGTSRAGIEAV 78 (416)
T ss_dssp CCCEECSSSSCCCCHHHHHHTTS----C---CCCTTSH--HHHHHHHHHHHHHHHHTT--CCCSEEEEEESCHHHHHHHH
T ss_pred ccceeecCCCcCcCHHHHHHhcc----c---CCCCccH--HHHHHHHHHHHHHHHHhC--CCCCcEEEecCcHHHHHHHH
Confidence 33445555566777777765433 1 1223332 234444455555555455 4456565 888999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 207 MQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 207 l~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
+..++ ++||+|+++.|+|+. +...++..|++++.++++.+ +.+|+++|++++++. ++++|++++|+||||
T Consensus 79 ~~~l~-~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG 150 (416)
T 3isl_A 79 LASVI-EPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWG--TVFDPEDIIREIKKV-----KPKIVAMVHGETSTG 150 (416)
T ss_dssp HHHHC-CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTT
T ss_pred HHHhc-CCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCC--CCCCHHHHHHHHhhC-----CCcEEEEEccCCCCc
Confidence 99998 799999999999997 77788899999999998754 478999999999843 789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.+++ +++|.++|+++|+++|+|++|......- .+ ...+ .+ +++.|++|.+.| +.++||++
T Consensus 151 ~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~----~~~~---~d---~~~~s~~K~l~g--~~g~g~~~ 210 (416)
T 3isl_A 151 RIHP---LKAIGEACRTEDALFIVDAVATIGGCEV-----KV----DEWK---ID---AAIGGTQKCLSV--PSGMAPIT 210 (416)
T ss_dssp EECC---CHHHHHHHHHTTCEEEEECTTTTTTSCC-----CT----TTTT---CS---EEECCSSSTTCC--CSSEEEEE
T ss_pred eecC---HHHHHHHHHHcCCEEEEECCccccCCCc-----ch----hhcC---CC---EEEecCccccCC--CCCeEEEE
Confidence 9999 8899999999999999999987432211 11 0111 23 789999998645 44589998
Q ss_pred EecCCHHHHHHHHHHh--------------------------------------h-cccCCchHHHHHHHHHcCCC-CC-
Q 013892 365 VTGFSAEVREQIYKVA--------------------------------------S-VNLCSNISGQILASLVMSPP-KV- 403 (434)
Q Consensus 365 ~~~~~~~~~~~l~~~~--------------------------------------~-~~~~~~~~~q~~~~~~l~~~-~~- 403 (434)
+ ++++++.+.... . ...+++...+.++...++.. ++
T Consensus 211 ~---~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g 287 (416)
T 3isl_A 211 Y---NERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEG 287 (416)
T ss_dssp E---CHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred E---CHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 7 889988886321 1 12345666666665555421 12
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++.+++++++++.+.+.|++.
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~ 309 (416)
T 3isl_A 288 LETRFERHRHHEAALAAGIKAM 309 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4577788888888888888763
No 127
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.91 E-value=5.7e-23 Score=209.49 Aligned_cols=299 Identities=13% Similarity=0.101 Sum_probs=197.5
Q ss_pred hhhcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHH
Q 013892 64 KVLKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSAD 143 (434)
Q Consensus 64 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~ 143 (434)
++..++.+....+..++.+++.. | .+++++..|++- +|+..+.. ++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~---g------~~~~~~~~g~~y----------------------lD~~~~~~--~~~ 56 (467)
T 1ax4_A 10 RIKMVEKIRVPSREEREAALKEA---G------YNPFLLPSSAVY----------------------IDLLTDSG--TNA 56 (467)
T ss_dssp EEEEEEECCCCCHHHHHHHHHHT---T------SCGGGSCGGGCS----------------------EECSCSSS--CCC
T ss_pred hhceeecccccchhHHHHHHHhc---C------cCcccCCCCcee----------------------eecccCcC--CHH
Confidence 34455555444567777777654 1 467888877753 24333211 144
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC----CCCE--
Q 013892 144 SIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS----ENDG-- 217 (434)
Q Consensus 144 v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~----~gd~-- 217 (434)
+.+++.+.+... ...|.+..|..+|++++++++ | .++|++|+|+++++..++.+++ + +||.
T Consensus 57 v~~a~~~~~~~~----~~~y~~~~~~~~l~~~la~~~----~----~~~v~~t~ggt~A~~~al~~~~-~~~~~~Gd~~~ 123 (467)
T 1ax4_A 57 MSDHQWAAMITG----DEAYAGSRNYYDLKDKAKELF----N----YDYIIPAHQGRGAENILFPVLL-KYKQKEGKAKN 123 (467)
T ss_dssp EEHHHHHHHHTC----CCCSSSCHHHHHHHHHHHHHH----C----CCEEEEESSHHHHHHHHHHHHH-HHHHHTTCCSS
T ss_pred HHHHHHHHHhhc----ccccccCccHHHHHHHHHHHc----C----CCcEEEcCCcHHHHHHHHHHHH-HhhccCCCccc
Confidence 666666666542 346888888999999999998 2 3689999999999999999987 6 8998
Q ss_pred -EEEcCCCChhHHHHHHHcCCeEEEEecCC----C----CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCC
Q 013892 218 -ILCPIPQYPLYSASIALHGGTLVPYYLDE----A----TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVL 287 (434)
Q Consensus 218 -Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~----~----~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~ 287 (434)
|+++.+.|..+...+...|++++.++... . .++.+|+++|++++++.. ..++++|++++|+||| |.++
T Consensus 124 ~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~ 201 (467)
T 1ax4_A 124 PVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPV 201 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCC
T ss_pred eEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCC
Confidence 99998888888888999999988776532 1 134689999999998631 0158999999999999 8999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC--C--------ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQE--N--------VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~--~--------~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G 357 (434)
+.+++++|+++|++||+++|+||++.. . .+.+ .++..+..++.. ..| +++.|+||.+ |++
T Consensus 202 ~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~d---~~~~s~sK~~-g~~- 271 (467)
T 1ax4_A 202 SMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKN----ATIKEVIFDMYK-YAD---ALTMSAKKDP-LLN- 271 (467)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTT----CCHHHHHHHHGG-GCS---EEEEETTSTT-CCS-
T ss_pred ChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCC----Cchhhhhhhhcc-ccc---eEEEeccccC-CCC-
Confidence 999999999999999999999998543 1 1221 122222211110 123 4568999988 554
Q ss_pred ceeEEEEEecCCH-HHHHHHHHHhh------cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 358 KRGGYMEVTGFSA-EVREQIYKVAS------VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 358 ~R~G~~~~~~~~~-~~~~~l~~~~~------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
-+||++. .++ ++++.+..... .....+.....++...++.... ++..+...++++.+.+.|++
T Consensus 272 -~Gg~~~~--~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 272 -IGGLVAI--RDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE-EEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp -SCEEEEE--SSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHH
T ss_pred -cceEEEe--CCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHh
Confidence 1366654 236 88887765432 1112233333322222321110 23444555677777777766
No 128
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.91 E-value=5.4e-24 Score=214.44 Aligned_cols=267 Identities=11% Similarity=0.086 Sum_probs=175.9
Q ss_pred Cccccccc----CCCC--CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 129 SILDRSET----QGLF--SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 129 ~~l~~~~~----~~~~--p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..+|++.+ +.++ |+.+++++.+.+.... .|+...+..+++.++++.+.+.+|.+. +++|++|+|++++
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea 116 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA-----HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA 116 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC-----CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc-----cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence 35666554 2333 7999999999886532 122222233445555555555566433 7899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcC-------------CeEEEEecCCC--CCCC------------CCH
Q 013892 203 VHMMMQLLIRSENDGILCPIPQYPLYSASIA-LHG-------------GTLVPYYLDEA--TGWG------------LET 254 (434)
Q Consensus 203 l~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g-------------~~~~~~~~~~~--~~~~------------~d~ 254 (434)
+..+++.+...+||+|++++|+|+++..... ..| ..++.++.+.. ..|+ +|+
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 196 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI 196 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence 9999988752248999999999986544322 222 25667766432 1123 368
Q ss_pred HHHH-HHHHHHHhcCCCeeEEEEecC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHh
Q 013892 255 SEVK-KQLEAAKAKGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSR 331 (434)
Q Consensus 255 ~~l~-~~l~~~~~~g~~~~~i~l~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 331 (434)
++|+ +++++.. ...+++ +++++| +||||. +.+++++++|.++|++||+++|+||+|.++.+.+. ...+ .
T Consensus 197 ~~l~~~~i~~~~-~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~--~~~~----~ 268 (419)
T 2eo5_A 197 EFIEDYIFVNLV-PPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK--LFAI----E 268 (419)
T ss_dssp HHHHHTHHHHTC-CGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGG----G
T ss_pred HHHHHHHHhhcc-CCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc--hhhH----H
Confidence 8898 8887410 001444 555677 467896 67889999999999999999999999999755443 2111 1
Q ss_pred hhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhhcccCCchHHHHHHHHHcCCCCCChHHHHH
Q 013892 332 SMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLVMSPPKVGDESYES 410 (434)
Q Consensus 332 ~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 410 (434)
..+ ..+| ++ ||||.| | .| +|+||+++ +++++ .+......+.+.++++|.++..+++.. ++.+++
T Consensus 269 ~~~-~~~d--~~---t~sK~~-~-~G~~riG~~~~---~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~---~~~~~~ 333 (419)
T 2eo5_A 269 NFN-TVPD--VI---TLAKAL-G-GGIMPIGATIF---RKDLD-FKPGMHSNTFGGNALACAIGSKVIDIV---KDLLPH 333 (419)
T ss_dssp GGT-CCCS--EE---EECGGG-G-TTTSCCEEEEE---EGGGC-CC------CCCCCHHHHHHHHHHHHHH---HHHHHH
T ss_pred hcC-CCCC--EE---Eecccc-c-CCccceEEEEE---chHhh-cCCcccCCCCCCCHHHHHHHHHHHHHH---HHHHHH
Confidence 111 2245 33 899999 5 49 99999987 67776 662133345578899999888888542 236777
Q ss_pred HHHHHHHHHHHHHH
Q 013892 411 YCAERDGILSSLAR 424 (434)
Q Consensus 411 ~~~~r~~l~~~L~~ 424 (434)
++++++.+.+.|++
T Consensus 334 ~~~~~~~l~~~L~~ 347 (419)
T 2eo5_A 334 VNEIGKIFAEELQG 347 (419)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887765
No 129
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.91 E-value=8.3e-24 Score=207.26 Aligned_cols=262 Identities=12% Similarity=0.089 Sum_probs=175.6
Q ss_pred CCccccccc-CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 128 PSILDRSET-QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 128 p~~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
|.++||+.+ ....++.+++++.+.+.. ....|++.....++++.+++++ | .+++|++|+|+++++..+
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~~~a 75 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSSG----QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAANALC 75 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTSS----CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHHHHH
T ss_pred CceEeeccCCccCCCHHHHHHHHhhccC----cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHHHHH
Confidence 445666555 445688888888776421 1345655544555666666654 5 244699999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHH--HHHc--CCeEEEEecCCCCCCCCCHHHHHH-HHHHHH-hcCCCeeEEEEecCC
Q 013892 207 MQLLIRSENDGILCPIPQYPLYSAS--IALH--GGTLVPYYLDEATGWGLETSEVKK-QLEAAK-AKGITVRALVVINPG 280 (434)
Q Consensus 207 l~~l~~~~gd~Vlv~~p~y~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~-~~g~~~~~i~l~~p~ 280 (434)
+..++ ++||.|+++.|+|..+... +... |++++.++.+ ++.+|+++|++ ++++.. ..+.++++|++++|+
T Consensus 76 l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~ 151 (356)
T 1v72_A 76 LSAMT-PPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT 151 (356)
T ss_dssp HHTSC-CTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC
T ss_pred HHHhc-CCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC
Confidence 99987 7999999999999887665 7777 9999998875 36899999998 886410 112258999999998
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc--CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY--VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~--~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
| ||.+++.+++++|+++|++||+++|+|++|..+.. .+.. ...+ . +. ...+ ++ +.|+||. | .
T Consensus 152 ~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~-~----~~-~~~d--~~-~~s~sK~--g---~ 215 (356)
T 1v72_A 152 E-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS-PAEM-T----WK-AGVD--AL-SFGATKN--G---V 215 (356)
T ss_dssp T-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC-TTTT-T----GG-GTCC--EE-EECCGGG--T---C
T ss_pred C-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC-HHHh-h----hh-hcCC--EE-EEecccC--C---C
Confidence 7 99999999999999999999999999999976422 1211 1100 0 00 0123 34 4599996 3 2
Q ss_pred eeE--EEEEecCCHHHHHHHHHHhh-cc-c-CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 359 RGG--YMEVTGFSAEVREQIYKVAS-VN-L-CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 359 R~G--~~~~~~~~~~~~~~l~~~~~-~~-~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
|+| |+++ ++++++.+..... .. . ......+..+...+++ +...+..+++.++++.+.+.|++
T Consensus 216 ~~G~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~ 282 (356)
T 1v72_A 216 LAAEAIVLF---NTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD-DLWLRNARKANAAAQRLAQGLEG 282 (356)
T ss_dssp SSCEEEEES---SGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCccEEEEE---CHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhh
Confidence 555 7755 8888888766543 11 1 2233444334455543 21234456666777777776654
No 130
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.91 E-value=2.4e-23 Score=205.77 Aligned_cols=254 Identities=12% Similarity=0.063 Sum_probs=177.0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 209 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~ 209 (434)
.++|+.++..+|+++++++.+.+. ..|. .+..++.+.+++++.+.+|.+.+.+.+++|+|+++++..+++.
T Consensus 20 ~~~~~pgp~~~~~~v~~a~~~~~~-------~~~~--~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~ 90 (376)
T 3f0h_A 20 MLNFTVGPVMSSEEVRAIGAEQVP-------YFRT--TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMN 90 (376)
T ss_dssp CEECSSSSCCCCHHHHHHHTSCCC-------CCSS--HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHH
T ss_pred ceeecCCCCCCcHHHHHHhcCCCC-------CCCC--HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHh
Confidence 345555666789999887654321 1222 2345677777777777777653334566699999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHH--HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 210 LIRSENDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
++ ++||+|+++.|.|..+. ..+...|++++.++.+. ++.+|+++|++++++ ++++|++++|+||||.++
T Consensus 91 ~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~ 161 (376)
T 3f0h_A 91 CF-TKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH--GKKLTKEKLYEYDNQ------NFTGLLVNVDETSTAVLY 161 (376)
T ss_dssp HC-CTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCT--TCCCCHHHHHTTTTS------CCCEEEEESEETTTTEEC
T ss_pred cc-CCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHhhcc------CceEEEEecccCCcceec
Confidence 98 79999999999777644 34677899999999864 468999999987654 799999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
+ +++|.++|+++|+++|+|++|..+... ..+. ..+ .+ +++.|+||.|+|.+| +|++++
T Consensus 162 ~---l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~----~~~---~d---~~~~s~~K~l~~~~G--~g~~~~-- 219 (376)
T 3f0h_A 162 D---TMMIGEFCKKNNMFFVCDCVSAFLADP-----FNMN----ECG---AD---VMITGSQKVLACPPG--ISVIVL-- 219 (376)
T ss_dssp C---HHHHHHHHHHTTCEEEEECTTTTTTSC-----CCHH----HHT---CS---EEEEETTTTTCCCSS--CEEEEE--
T ss_pred C---HHHHHHHHHHcCCEEEEEcCccccCcc-----cccc----ccC---cc---EEEecCcccccCCCc--eEEEEE--
Confidence 9 999999999999999999999864321 1111 111 12 788999999954667 566766
Q ss_pred CCHHHHHHHHHHhh------------------cccCCchHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEVREQIYKVAS------------------VNLCSNISGQILASLVMS---PPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 368 ~~~~~~~~l~~~~~------------------~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++++++.+..... ....++.....++...+. ....+++.++++++.++.+.+.|++
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 296 (376)
T 3f0h_A 220 -APRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD 296 (376)
T ss_dssp -CHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -CHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8898888764211 122344433233333332 1112455666777777777776654
No 131
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.91 E-value=2.1e-23 Score=204.73 Aligned_cols=254 Identities=13% Similarity=0.108 Sum_probs=184.4
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCCCCC-CCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAY-SHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQ 208 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y-~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~ 208 (434)
++.|+.++..+|+++++++.+.+.+. ..+| ....+..++.+.+.+++.+.+|.. ++++|++|+|+++++..++.
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~ 79 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEK----IGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQ 79 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTT----TTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCC----ccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHH
Confidence 45566667788999999988887753 2111 123345566777777777777753 56789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCChh-HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC
Q 013892 209 LLIRSENDGILCPIPQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL 287 (434)
Q Consensus 209 ~l~~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~ 287 (434)
++. .+ +.|++..+.|.. +...++..|++++.++.+. ++.+|+++|+ +++ ++++|++++|+||||.++
T Consensus 80 ~l~-~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~--~~~------~~~~v~~~~~~nptG~~~ 147 (362)
T 3ffr_A 80 NCV-EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAF--GKGFYPADIT--VPA------DAEIICLTHNETSSGVSM 147 (362)
T ss_dssp HHC-SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCGGGCC--CCT------TCCEEEEESEETTTTEEC
T ss_pred hcc-CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCC--CCCCCHHHHh--ccC------CccEEEEEcCCCCcceeC
Confidence 998 56 556666666663 3456778899999999864 4688999988 433 799999999999999999
Q ss_pred CHHHHHHHHHHHHHc-CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 288 AEENQRAIVDFCKKE-GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
+ +++|.++|+++ |+++|+|++|..+..... +.. .+ +++.|+||.|+|++|+ |++++
T Consensus 148 ~---l~~i~~la~~~p~~~li~D~a~~~~~~~~~------------~~~--~d---~~~~s~~K~~~~~~G~--g~~~~- 204 (362)
T 3ffr_A 148 P---VEDINTFRDKNKDALIFVDAVSSLPYPKFD------------WTK--ID---SVFFSVQKCFGLPAGL--GVWIL- 204 (362)
T ss_dssp C---HHHHTTSGGGSTTSEEEEECTTTTTSSCCC------------TTS--CS---EEEEETTSTTCCCSCC--EEEEE-
T ss_pred C---HHHHHHHHHhCCCCEEEEecccccCCcccC------------hhH--Cc---EEEEecccccCCCCce--EEEEE-
Confidence 9 88899999999 999999999986322111 000 12 7889999999547885 66665
Q ss_pred cCCHHHHHHHHHHhh----------------------cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVAS----------------------VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 367 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L 422 (434)
++++++.+..... ...+++...+.++..+++. ...+++.+++++++++.+.+.|
T Consensus 205 --~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 282 (362)
T 3ffr_A 205 --NDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYI 282 (362)
T ss_dssp --EHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 8888888776542 1446677777666655541 1124567778888888888888
Q ss_pred HHH
Q 013892 423 ARR 425 (434)
Q Consensus 423 ~~~ 425 (434)
++.
T Consensus 283 ~~~ 285 (362)
T 3ffr_A 283 ESS 285 (362)
T ss_dssp HHC
T ss_pred HHc
Confidence 764
No 132
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.91 E-value=2.1e-23 Score=210.27 Aligned_cols=245 Identities=13% Similarity=0.114 Sum_probs=177.2
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC------
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------ 213 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~------ 213 (434)
.++.+++++.+.++.... ....| ..++++++++.+.+..| .++|++|+|+++++..+++.+. .
T Consensus 74 ~~p~v~~ai~~~~~~~~~-~~~~~-----~~~~~~~l~~~la~~~g----~~~v~~~~ggteA~~~al~~~~-~~~~~~~ 142 (420)
T 2pb2_A 74 CHPALVEALKSQGETLWH-TSNVF-----TNEPALRLGRKLIDATF----AERVLFMNSGTEANETAFKLAR-HYACVRH 142 (420)
T ss_dssp TCHHHHHHHHHHHTTCCC-CCTTS-----CCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHHHHHHHHH-HHHHHHT
T ss_pred CCHHHHHHHHHHHHhccc-ccCcc-----CCHHHHHHHHHHHhhCC----CCeEEEeCCHHHHHHHHHHHHH-HHhhhcc
Confidence 478899999988876421 11123 23455556666555544 5799999999999999999886 3
Q ss_pred -CC-CEEEEcCCCChhHHH-HHHHcCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 214 -EN-DGILCPIPQYPLYSA-SIALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 214 -~g-d~Vlv~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
+| ++|++++|+|..+.. .+...|.+ +..++. .|+++|++++++ ++++|+++.
T Consensus 143 ~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~------~~~~vi~~p 209 (420)
T 2pb2_A 143 SPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDD------HTCAVVVEP 209 (420)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCT------TEEEEEECS
T ss_pred CCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhcc------CceEEEEeC
Confidence 67 599999999987644 44455543 444442 279999998875 799999888
Q ss_pred CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC
Q 013892 279 PGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (434)
Q Consensus 279 p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G 357 (434)
++|++|. +++.+++++|.++|+++|+++|+||+|.++.+.+. ...+ .. .+ ..+| ++ ||||.+ | +|
T Consensus 210 ~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~--~~~~-~~---~~-~~~d--ii---t~sK~l-~-~G 275 (420)
T 2pb2_A 210 IQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD--LFAY-MH---YG-VTPD--IL---TSAKAL-G-GG 275 (420)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHH-HH---HT-CCCS--EE---EECGGG-G-TT
T ss_pred CcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc--HHHH-Hh---cC-CCCC--eE---Eecccc-c-CC
Confidence 8888884 69999999999999999999999999988655443 2221 11 11 2255 33 789999 6 79
Q ss_pred ceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 358 KRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 358 ~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
+|+||+++ ++++++.+... ...+.+.+++++.++...++..+. ++..++++++++.+.+.|++..
T Consensus 276 ~~iG~~~~---~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~ 341 (420)
T 2pb2_A 276 FPVSAMLT---TQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-PEVLQGIHTKRQQFVQHLQAID 341 (420)
T ss_dssp SCCEEEEE---CHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEE---hHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 77887776543 224457788888888777754322 5778889999999999998764
No 133
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.91 E-value=3.4e-23 Score=209.00 Aligned_cols=257 Identities=16% Similarity=0.152 Sum_probs=172.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc--C----
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR--S---- 213 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~--~---- 213 (434)
.++.+++++.+.+..........|+. ....++++.+++++ + +++++|++|+|+++++..+++.+.. .
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~--~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~ 132 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT----P--QPLECVFLADSGSVAVEVAMKMALQYWQAKGE 132 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS----C--TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC----C--CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 47889999999887642101123432 22345555555554 4 4688999999999999999886531 2
Q ss_pred CCCEEEEcCCCChhHHHHHHHc----------------CCeEEEEecCC-CCCC-CCCHHHHHHHHHHHHhcCCCeeEEE
Q 013892 214 ENDGILCPIPQYPLYSASIALH----------------GGTLVPYYLDE-ATGW-GLETSEVKKQLEAAKAKGITVRALV 275 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~~~~~~~~----------------g~~~~~~~~~~-~~~~-~~d~~~l~~~l~~~~~~g~~~~~i~ 275 (434)
+||+|++++|+|+.+....... +...++++... +..| .+|+++|++++++. +.++++|
T Consensus 133 ~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v- 208 (429)
T 1s0a_A 133 ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAV- 208 (429)
T ss_dssp CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEE-
T ss_pred CCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEE-
Confidence 5899999999998765433221 23333333210 1234 48999999999752 1145554
Q ss_pred EecC--CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCC
Q 013892 276 VINP--GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (434)
Q Consensus 276 l~~p--~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~ 352 (434)
+++| +||||. +.+++++++|.++|+++|+++|+||+|.++.+.+. ...+. ..+ ..+| ++ ||||.|
T Consensus 209 i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~--~~~~~----~~~-~~~d--~~---t~sK~l 276 (429)
T 1s0a_A 209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK--LFACE----HAE-IAPD--IL---CLGKAL 276 (429)
T ss_dssp EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGG----GGT-CCCS--EE---EECGGG
T ss_pred EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch--HHHhh----hcC-CCCC--EE---Eecccc
Confidence 4556 699996 56788899999999999999999999998644332 11111 111 2245 23 789999
Q ss_pred CCCCC-ceeEEEEEecCCHHHHHHHHHH------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 353 YGECG-KRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 353 ~g~~G-~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
| .| +|+||+++ ++++++.+... ...+.+++++++.++..+++.-+. ++..++++++++.+.+.|++.
T Consensus 277 -~-~G~~~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 277 -T-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES-GDWQQQVADIEVQLREQLAPA 350 (429)
T ss_dssp -G-TSSSCCEEEEE---CHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHGGG
T ss_pred -c-CCCccceEEEe---CHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH
Confidence 5 58 99999987 88999888763 223456788998888777753111 256777888888888888764
No 134
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.91 E-value=2.3e-23 Score=205.61 Aligned_cols=249 Identities=13% Similarity=0.084 Sum_probs=172.3
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc---CCC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR---SEN 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~---~~g 215 (434)
.+|+.+++++.+.+.+........|....+..++.+.+.+++.+.+| +++++|++|+|+++++..++++++. ++|
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~g 88 (382)
T 4hvk_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN--GGGGTVVFTSGATEANNLAIIGYAMRNARKG 88 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTT--CTTEEEEEESSHHHHHHHHHHHHHHHHGGGC
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcC--CCcCeEEEECCchHHHHHHHHHhhhhhcCCC
Confidence 56888999999888763221112233223344555555555555556 4678899999999999999998862 489
Q ss_pred CEEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHH
Q 013892 216 DGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l 292 (434)
|+|+++.++|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+++ +
T Consensus 89 d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~ 157 (382)
T 4hvk_A 89 KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---V 157 (382)
T ss_dssp CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---H
T ss_pred CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhcc------CceEEEEECCCCCceeeCC---H
Confidence 9999999999998776555 599999999874 458999999999876 7999999999999999999 7
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH
Q 013892 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 293 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
++|.++|+++|+ +|+|++|..... ...+. ..+ .+ +++.|+||.+ |.+| +|++++. ++.
T Consensus 158 ~~i~~l~~~~~~-li~D~a~~~~~~-----~~~~~----~~~---~d---~~~~s~~K~~-g~~g--~g~~~~~---~~~ 215 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDATASVGQI-----EVDVE----KIG---AD---MLTISSNDIY-GPKG--VGALWIR---KEA 215 (382)
T ss_dssp HHHHHHHSSSSE-EEEECTTTBTTB-----CCCHH----HHT---CS---EEEEESGGGT-SCTT--CEEEEEE---TTC
T ss_pred HHHHHHHHHcCE-EEEEhHHhcCCC-----CCCch----hcC---CC---EEEEeHHHhc-CCCc--eEEEEEc---Ccc
Confidence 899999999999 999999874221 11111 111 23 7899999976 6666 5666542 221
Q ss_pred HHHHHHHh--------hcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVA--------SVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 373 ~~~l~~~~--------~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
.+.... .....++...+.++...+.. .+.+++.+++++++++.+.+.|++
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4hvk_A 216 --KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp --CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 111110 01234456666655554432 123456667777777777777764
No 135
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.90 E-value=1e-23 Score=210.62 Aligned_cols=248 Identities=16% Similarity=0.103 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCc---chHH--HHHHHH-HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQ---GIKG--LRDTIA-AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE 214 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~---G~~~--lr~~ia-~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~ 214 (434)
|+.+++++.+.+.+.. ...|+... |.+. +++.++ +++.+.+| .++++|++++|+ +++..++..++ ++
T Consensus 36 ~~~v~~a~~~~~~~~~---~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~sGt-~a~~~~~~~~~-~~ 108 (407)
T 2dkj_A 36 SKQVREAVGSVLTNKY---AEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHSGS-QANMAVYMALM-EP 108 (407)
T ss_dssp CHHHHHHHTSGGGGCC---CCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSHH-HHHHHHHHHHC-CT
T ss_pred CHHHHHHHHhhhhcCc---ccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecchH-HHHHHHHHHhc-CC
Confidence 7788888887775421 33455433 4443 444322 35555555 345556677765 59999999997 79
Q ss_pred CCEEEEcCCCChhH---HHHHHHcCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 215 NDGILCPIPQYPLY---SASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 215 gd~Vlv~~p~y~~~---~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
||+|+++.|+|+.+ ...++..|. .++++++++ ++|.+|+++|++++++. ++++|++++|+|| .+.+
T Consensus 109 gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~~~~p~~~--~~~~- 179 (407)
T 2dkj_A 109 GDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTELIDLEEVRRLALEH-----RPKVIVAGASAYP--RFWD- 179 (407)
T ss_dssp TCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCSEEEECCSSCC--SCCC-
T ss_pred CCEEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCccCHHHHHHHHhhc-----CCeEEEEeccccC--CCCC-
Confidence 99999999999887 344555565 444444332 35789999999999853 6899999999998 5555
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCC-CccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQE-NVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 368 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~-~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~ 368 (434)
+++|.++|+++|+++|+||+|.. +.+.+. ..+. +. .. .+++.|+||.+ +|.|+||+++
T Consensus 180 --l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~------~~--~~---di~~~s~sK~l---~g~~~G~~~~--- 238 (407)
T 2dkj_A 180 --FKAFREIADEVGAYLVVDMAHFAGLVAAGL--HPNP------LP--YA---HVVTSTTHKTL---RGPRGGLILS--- 238 (407)
T ss_dssp --HHHHHHHHHHHTCEEEEECTTTHHHHHTTC--SCCC------TT--TC---SEEEEESSGGG---CCCSCEEEEE---
T ss_pred --HHHHHHHHHHcCCEEEEEccccccccccCc--cCCc------cc--cc---cEEEEeccccC---CCCCceEEEE---
Confidence 89999999999999999999998 444432 1111 00 12 37899999966 4899999987
Q ss_pred C-HHHHHHHHHHhh--cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 369 S-AEVREQIYKVAS--VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 369 ~-~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+ +++++.+..... ....++.....++..+++. .+++++.+++++++++.+.+.|++.
T Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 300 (407)
T 2dkj_A 239 NDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR 300 (407)
T ss_dssp SCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 6 899998877654 2223444333344444443 2344677888888888888888765
No 136
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=1.3e-23 Score=208.15 Aligned_cols=257 Identities=11% Similarity=0.024 Sum_probs=180.1
Q ss_pred CcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCC--cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 129 SILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHS--QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 129 ~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
..+.|..++..+++.+++++.+.+. ..|.+. ....++++++++++....+ +++++|++|+|+++++..+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~al~~~ 75 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSL-------GHTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLGWDIF 75 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCC-------CTTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHHHHHH
T ss_pred cceeecCCCcCchHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHHHHHH
Confidence 3455666666778888776543211 112221 2456788888888765333 4678999999999999999
Q ss_pred HHHHhc--CCCCEEEEc-CCCChhHH-HHHHHcCCeEEEEec-CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCC
Q 013892 207 MQLLIR--SENDGILCP-IPQYPLYS-ASIALHGGTLVPYYL-DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGN 281 (434)
Q Consensus 207 l~~l~~--~~gd~Vlv~-~p~y~~~~-~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~N 281 (434)
++.+.. ++||+|+++ .|+|..+. ..++..|++++.+++ ++ ++.+|+++|++++++. ++++|++++|+|
T Consensus 76 ~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~n 148 (385)
T 2bkw_A 76 ASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI--GESVPLELITEKLSQN-----SYGAVTVTHVDT 148 (385)
T ss_dssp HHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST--TSCCCHHHHHHHHHHS-----CCSEEEEESEET
T ss_pred HHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC--CCCCCHHHHHHHHhcC-----CCCEEEEEccCC
Confidence 999862 489999888 55666653 677888999999998 53 4679999999999762 588999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHc--CCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 282 PTGQVLAEENQRAIVDFCKKE--GLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 282 PtG~~~~~~~l~~i~~~~~~~--~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
|||.+++ +++|.++|+++ |+++|+||+|..... ...+ ..++ .+ +++.|+||.+.|.+|+
T Consensus 149 ptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~~-----~~~~----~~~~---~d---~~~~s~~K~~~~~~G~- 209 (385)
T 2bkw_A 149 STAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGCE-----EFEF----DEWG---VD---FALTASQKAIGAPAGL- 209 (385)
T ss_dssp TTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTTS-----CCCT----TTTT---CS---EEEEESSSTTCCCSCE-
T ss_pred CcCeEcC---HHHHHHHHHhhCCCCEEEEECccccCCc-----cccc----cccC---ce---EEEecCccccccCCcc-
Confidence 9999999 88999999999 999999999974211 1111 1111 23 7889999987566675
Q ss_pred eEEEEEecCCHHHHH-HHH----------------------HHhhc----ccCCchHHHHHHHHHcCCC-C-CChHHHHH
Q 013892 360 GGYMEVTGFSAEVRE-QIY----------------------KVASV----NLCSNISGQILASLVMSPP-K-VGDESYES 410 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~-~l~----------------------~~~~~----~~~~~~~~q~~~~~~l~~~-~-~~~~~~~~ 410 (434)
||+++ ++++++ .+. ..... ...++..++.++...++.. + .+++.+++
T Consensus 210 -G~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 285 (385)
T 2bkw_A 210 -SISLC---SSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDL 285 (385)
T ss_dssp -EEEEE---CHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred -eEEEE---cHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 99987 777766 441 11110 1356667666665555421 1 13456777
Q ss_pred HHHHHHHHHHHH-HH
Q 013892 411 YCAERDGILSSL-AR 424 (434)
Q Consensus 411 ~~~~r~~l~~~L-~~ 424 (434)
++++++.+.+.| ++
T Consensus 286 ~~~~~~~l~~~L~~~ 300 (385)
T 2bkw_A 286 HREMSDWFKDSLVNG 300 (385)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh
Confidence 788888888877 54
No 137
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.90 E-value=1.4e-23 Score=212.49 Aligned_cols=269 Identities=15% Similarity=0.107 Sum_probs=183.9
Q ss_pred Cccccccc-C---CC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-CCEEEcCChHHH
Q 013892 129 SILDRSET-Q---GL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP-NDIFLTDGASPA 202 (434)
Q Consensus 129 ~~l~~~~~-~---~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~~~a 202 (434)
.++|++.+ + .+ .++.+++++.+.+... ..|+...|..++++++++++.+.++. .. +++++|+|++++
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggsea 116 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANP-----AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSDA 116 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-----SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHHH
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhc-----cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHHH
Confidence 35666655 1 22 6889999999988763 34555667778888888888887653 33 699999999999
Q ss_pred HHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCe-E--------------EEEecCCCCCCCC-----CHHHHHHHH
Q 013892 203 VHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGT-L--------------VPYYLDEATGWGL-----ETSEVKKQL 261 (434)
Q Consensus 203 l~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~~l 261 (434)
+..+++.+.. .+++.|++.+|+|+.+.......+.. . ..++... .+.. |+++|++++
T Consensus 117 ~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 117 NEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHH
Confidence 9999988521 36788999999997655544433322 1 1222211 1111 689999988
Q ss_pred HHHHhcCCCeeEEEEecCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 262 EAAKAKGITVRALVVINPGNPTGQVLAE-ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~~p~NPtG~~~~~-~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
+.. ...++++|+++.++|++|.+.+. +.+++|.++|++||+++|+||+|.++.+.+. ...+ ...+ ..++
T Consensus 195 ~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~--~~~~----~~~~-~~~d- 264 (439)
T 3dxv_A 195 AAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR--LHCF----EHEG-FVPD- 264 (439)
T ss_dssp HTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS--SSGG----GGTT-CCCS-
T ss_pred Hhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--hhHH----HhcC-CCCC-
Confidence 510 11267777777778888887654 5599999999999999999999998544432 1111 1111 2245
Q ss_pred eEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHH
Q 013892 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 419 (434)
++ ||||+| | +|+|+||+++ ++++++.+..... .+. .+++++.++..+++..+. ++.+++++++++.+.
T Consensus 265 -i~---s~sK~~-~-~G~riG~~~~---~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~ 333 (439)
T 3dxv_A 265 -IL---VLGKGL-G-GGLPLSAVIA---PAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLR 333 (439)
T ss_dssp -EE---EECGGG-G-TTSCCEEEEE---EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHH
T ss_pred -EE---EEcchh-c-CCcceEEEEE---CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHH
Confidence 23 999999 5 5999999987 8888888765432 444 788888888777753211 356778888888888
Q ss_pred HHHHHHHH
Q 013892 420 SSLARRAK 427 (434)
Q Consensus 420 ~~L~~~~~ 427 (434)
+.|++...
T Consensus 334 ~~l~~~~~ 341 (439)
T 3dxv_A 334 DGLSELAK 341 (439)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887653
No 138
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.90 E-value=1.2e-23 Score=209.80 Aligned_cols=258 Identities=12% Similarity=0.076 Sum_probs=177.8
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.++|++.+ +.+ .|+.+++++.+.+..... ....| +.....++++.++++ +| +++++|++|+|+++++
T Consensus 46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~-~~~~~-~~~~~~~l~~~la~~----~~--~~~~~v~~~~gg~~a~ 117 (395)
T 1vef_A 46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA-MPQTL-PTPMRGEFYRTLTAI----LP--PELNRVFPVNSGTEAN 117 (395)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC-CCTTS-CCHHHHHHHHHHHHT----SC--TTEEEEEEESSHHHHH
T ss_pred EEEEccCccccccCCCCCHHHHHHHHHHHHhCCC-Ccccc-CCHHHHHHHHHHHHh----cC--CCcCEEEEcCcHHHHH
Confidence 35676554 333 788999999998876432 11234 334455666666655 34 4678999999999999
Q ss_pred HHHHHHHh-cCCCCEEEEcCCCChh-HHHHHHHcCCe------------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 204 HMMMQLLI-RSENDGILCPIPQYPL-YSASIALHGGT------------LVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 204 ~~~l~~l~-~~~gd~Vlv~~p~y~~-~~~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
..+++.+. ..+||.|++++|+|+. +...+...|.+ +..++ ..|+++|++++++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~------ 184 (395)
T 1vef_A 118 EAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-------YNDVEALKRAVDE------ 184 (395)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCT------
T ss_pred HHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-------CCcHHHHHHHhcc------
Confidence 99998762 0368999999999965 44566666765 22222 2489999998875
Q ss_pred CeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC
Q 013892 270 TVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV 348 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~ 348 (434)
++++|+++.++||||.++ +.+++++|.++|+++|+++|+||+|.++.+.+. ...+ ... . ..+| ++ ||
T Consensus 185 ~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~--~~~~-~~~-~---~~~d--~~---s~ 252 (395)
T 1vef_A 185 ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK--RFAF-EHF-G---IVPD--IL---TL 252 (395)
T ss_dssp TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTH-HHH-T---CCCS--EE---EE
T ss_pred CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc--hhHh-hhc-C---CCCC--EE---EE
Confidence 788887766689999865 688899999999999999999999997544332 2221 111 1 1244 33 88
Q ss_pred CCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 349 SKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 349 SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
||.| +. |+|+||+++ ++++++.+..... ...+++.+.+.++...++..+. ++..++++++++.+.+.|++.
T Consensus 253 sK~~-~~-g~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~ 324 (395)
T 1vef_A 253 AKAL-GG-GVPLGVAVM---REEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFMEKLRAI 324 (395)
T ss_dssp CGGG-GT-TSSCEEEEE---EHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHTS
T ss_pred cccc-cC-CCceEEEEe---hHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHh
Confidence 9999 54 999999987 7777776654222 3446788888877776653211 245667777777777777653
No 139
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.90 E-value=2.6e-22 Score=201.89 Aligned_cols=210 Identities=16% Similarity=0.169 Sum_probs=158.7
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecCCC
Q 013892 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEA 247 (434)
Q Consensus 172 lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~ 247 (434)
.++++++.+.+.+| .+++++++|+++++..++.+++ ++||+|+++.|+|..+...++. .|++++.++.+
T Consensus 82 ~~~~l~~~la~~~g----~~~~~~~~sG~~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-- 154 (414)
T 3ndn_A 82 TVSVFEERLRLIEG----APAAFATASGMAAVFTSLGALL-GAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-- 154 (414)
T ss_dssp HHHHHHHHHHHHHT----CSEEEEESSHHHHHHHHHHTTC-CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHC----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC--
Confidence 44444444444445 3578899999999999999888 7999999999999998777644 89999999864
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchH
Q 013892 248 TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFK 327 (434)
Q Consensus 248 ~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~ 327 (434)
|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|....+... +
T Consensus 155 -----d~~~l~~ai~~------~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~-----~- 214 (414)
T 3ndn_A 155 -----DLSQWERALSV------PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQG-----F- 214 (414)
T ss_dssp -----CHHHHHHHTSS------CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCC-----G-
T ss_pred -----CHHHHHHhcCC------CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCc-----h-
Confidence 78999998876 7999999999999999988 88999999999999999999985432211 1
Q ss_pred HHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHH-HHHHHhh-cccCCchHHHHHHHHHcCCCCCC
Q 013892 328 KVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVRE-QIYKVAS-VNLCSNISGQILASLVMSPPKVG 404 (434)
Q Consensus 328 ~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~ 404 (434)
.++ .+ ++++|+||.| |.+| +|+||+++ +++.+. .+..... ...+.++...+++...+ +.+
T Consensus 215 ----~~g---~d---iv~~S~sK~l-~~~G~~~~G~vv~---~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l---~~l 277 (414)
T 3ndn_A 215 ----PLG---VD---VVVYSGTKHI-DGQGRVLGGAILG---DREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL---ETL 277 (414)
T ss_dssp ----GGT---CS---EEEEETTTTT-TCSSCCCCEEEEE---CHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG---GGH
T ss_pred ----hcC---CC---eEeccCCccc-cCCCCceEEEEEE---CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH---HHH
Confidence 111 12 7899999999 6678 89999987 777665 6664444 34455666555554444 334
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 013892 405 DESYESYCAERDGILSSLARR 425 (434)
Q Consensus 405 ~~~~~~~~~~r~~l~~~L~~~ 425 (434)
....++..++++.+.+.|+++
T Consensus 278 ~~r~~~~~~~a~~l~~~L~~~ 298 (414)
T 3ndn_A 278 AIRVQHSNASAQRIAEFLNGH 298 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 566677778888888877754
No 140
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.90 E-value=4.1e-22 Score=199.10 Aligned_cols=213 Identities=15% Similarity=0.137 Sum_probs=168.1
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVP 241 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~ 241 (434)
.....++++.+++++ | .+++++++|+++++..++..++ .+||+|+++.|+|+.+...+ +..|.+++.
T Consensus 65 ~~~~~~l~~~la~~~----g----~~~~~~~~sGt~A~~~al~~~~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~ 135 (392)
T 3qhx_A 65 NPTRTALEAALAAVE----D----AAFGRAFSSGMAAADCALRAML-RPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTP 135 (392)
T ss_dssp CHHHHHHHHHHHHHT----T----CSEEEEESSHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEE
T ss_pred ChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEE
Confidence 344678888888876 3 2368889999999999999887 79999999999999877766 567999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC
Q 013892 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (434)
Q Consensus 242 ~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 321 (434)
++.+ |+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|........
T Consensus 136 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~~- 198 (392)
T 3qhx_A 136 VALA-------DLDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQP- 198 (392)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCCG-
T ss_pred eCCC-------CHHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCCh-
Confidence 8864 79999999876 7999999999999999988 99999999999999999999986533211
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcC
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS 399 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~ 399 (434)
. .++ .| ++++|+||.+ |.+| .|+||++. .++++++.+..... ...+.++..++++...++
T Consensus 199 -~--------~~~---~d---i~~~S~sK~l-g~~g~~~~G~v~~--~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 199 -L--------SLG---AD---VVLHSTTKYI-GGHSDVVGGALVT--NDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp -G--------GGT---CS---EEEEETTTTT-TCSSCCCCEEEEE--SCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred -H--------HhC---Cc---EEEEcCcccc-CCCCCceEEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 0 111 33 8899999999 5566 89999976 34788888877665 556778888888777775
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 400 PPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
. +....++..++.+.+.+.|+++
T Consensus 261 ~---l~~~~~~~~~~~~~l~~~L~~~ 283 (392)
T 3qhx_A 261 T---LVLRMQRHSENAAAVAEFLAEH 283 (392)
T ss_dssp T---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred H---HHHHHHHHHHHHHHHHHHHhcC
Confidence 3 3455666677777777777654
No 141
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.90 E-value=4.5e-22 Score=197.93 Aligned_cols=192 Identities=15% Similarity=0.225 Sum_probs=156.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~V 218 (434)
+|+++++++.+.+... .|.+..+..++++++++++ | .+++++|+|+++++..++.++ + .+||+|
T Consensus 18 ~~~~~~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~----~----~~~~~~~~~gt~al~~~~~~~~~-~~gd~V 82 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSG------WITTGPKNQELEAAFCRLT----G----NQYAVAVSSATAGMHIALMALGI-GEGDEV 82 (393)
T ss_dssp CCHHHHHHHHHHHHHT------CCSSSHHHHHHHHHHHHHH----C----CSEEEEESCHHHHHHHHHHHTTC-CTTCEE
T ss_pred CCHHHHHHHHHHHhcC------CcCCChHHHHHHHHHHHHh----C----CCcEEEecChHHHHHHHHHHcCC-CCCCEE
Confidence 5788888888888763 2445678999999999998 2 247999999999999999998 7 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|+.+...++..|++++.++++++ +|.+|+++|++++++ ++++|+++ ||||.+.+ +++|.++
T Consensus 83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v~~~---~~~G~~~~---~~~i~~l 149 (393)
T 1mdo_A 83 ITPSMTWVSTLNMIVLLGANPVMVDVDRD-TLMVTPEHIEAAITP------QTKAIIPV---HYAGAPAD---LDAIYAL 149 (393)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCT------TEEEECCB---CGGGCCCC---HHHHHHH
T ss_pred EeCCCccHhHHHHHHHCCCEEEEEeccCC-cCCCCHHHHHHhcCC------CceEEEEe---CCCCCcCC---HHHHHHH
Confidence 99999999999999999999999998753 578999999998875 78888876 48999887 8999999
Q ss_pred HHHcCCEEEEccCCCCC-ccCCCCCccchHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHH
Q 013892 299 CKKEGLVLLADEVYQEN-VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQ 375 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~-~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~ 375 (434)
|+++|+++|+||+|..+ .+.+. + ++ . . .+++.||| |.+ +|.|+||++. .++++++.
T Consensus 150 ~~~~~~~li~D~a~~~g~~~~~~-~----------~~-~-~---d~~~~S~~k~K~l---~~~~~g~~~~--~~~~~~~~ 208 (393)
T 1mdo_A 150 GERYGIPVIEDAAHATGTSYKGR-H----------IG-A-R---GTAIFSFHAIKNI---TCAEGGIVVT--DNPQFADK 208 (393)
T ss_dssp HHHHTCCBCEECTTCTTCEETTE-E----------TT-S-S---SEEEEECCTTSSS---CSSSCEEEEE--SCHHHHHH
T ss_pred HHHcCCeEEEECccccCCeECCe-e----------cC-C-C---CeEEEeCCCCCcc---ccccceEEEe--CCHHHHHH
Confidence 99999999999999963 34321 1 11 0 1 37889999 655 4669999976 24889888
Q ss_pred HHHHh
Q 013892 376 IYKVA 380 (434)
Q Consensus 376 l~~~~ 380 (434)
+....
T Consensus 209 l~~~~ 213 (393)
T 1mdo_A 209 LRSLK 213 (393)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87654
No 142
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.90 E-value=3.4e-23 Score=210.82 Aligned_cols=277 Identities=13% Similarity=0.048 Sum_probs=186.6
Q ss_pred CCCccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+|||..+ +.+ -++.+++++.+++... ..|....+..+.+.++++++.+..+.. ..++|++|+|+++
T Consensus 63 G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGse 136 (453)
T 4ffc_A 63 GNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF-----THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAE 136 (453)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC-----SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHH
T ss_pred CCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc-----cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHH
Confidence 4457888776 222 4899999999998763 235544556667777777777765521 3579999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCC--------------eEEEEecC--CCCCCCCCH-HHHHHHHHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGG--------------TLVPYYLD--EATGWGLET-SEVKKQLEA 263 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~--------------~~~~~~~~--~~~~~~~d~-~~l~~~l~~ 263 (434)
++..+++.+.. ..++.|++.+++|+.+.......+. .+..++.. ..+.++.+. +.++..++.
T Consensus 137 A~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 216 (453)
T 4ffc_A 137 AVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISR 216 (453)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHH
Confidence 99999987652 2458999999999987766554432 23444433 112234442 333322222
Q ss_pred HHhc-CCCeeEEEEecCCCCCc--cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 264 AKAK-GITVRALVVINPGNPTG--QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 264 ~~~~-g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
.++. ..+..++++++|.|++| .+.+++.+++|.++|++||+++|+||+|.++.+.+. +..+.. .+ ..++
T Consensus 217 l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~~a~~~----~~-~~pd- 288 (453)
T 4ffc_A 217 IETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA--WFASEH----EG-IVPD- 288 (453)
T ss_dssp HHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHH----HT-CCCS-
T ss_pred HHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc--cchhhh----cC-CCcc-
Confidence 1110 11456788888988887 444778899999999999999999999999655443 222211 11 2244
Q ss_pred eEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHH
Q 013892 341 SLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 419 (434)
+.+|||++ |. |+|+||+++ ++++++.+..... .+++.++++|.++..+++..+. ++..++.+++++.++
T Consensus 289 ----i~t~sK~~-~~-G~~~G~~~~---~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~ 358 (453)
T 4ffc_A 289 ----IVTMAKGI-AG-GMPLSAVTG---RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARARAIEASVT 358 (453)
T ss_dssp ----EEEECGGG-GT-TSSCEEEEE---EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHH
T ss_pred ----hHhhhhhh-cC-CcCeEEEEE---CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHH
Confidence 33789999 54 999999987 8899888765443 5668899999988887753211 256677777788888
Q ss_pred HHHHHHHH
Q 013892 420 SSLARRAK 427 (434)
Q Consensus 420 ~~L~~~~~ 427 (434)
+.|++...
T Consensus 359 ~~l~~~~~ 366 (453)
T 4ffc_A 359 SRLSALAE 366 (453)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88777643
No 143
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.90 E-value=6.8e-22 Score=197.23 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=165.5
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVP 241 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 241 (434)
.....++++.+++++ | . +++++++++++++..++..++ .+||+|+++.|+|+.+... ++..|++++.
T Consensus 58 ~~~~~~l~~~la~~~----g--~--~~~i~~~sG~~ai~~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 128 (389)
T 3acz_A 58 NPTVEQFEEMVCSIE----G--A--AGSAAFGSGMGAISSSTLAFL-QKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDL 128 (389)
T ss_dssp CHHHHHHHHHHHHHH----T--C--SEEEEESSHHHHHHHHHTTTC-CTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHHHHh----C--C--CeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence 345778999999987 3 2 256666667799999999887 7999999999999987665 5778999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC
Q 013892 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (434)
Q Consensus 242 ~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 321 (434)
++. .|+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 129 v~~-------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~-- 190 (389)
T 3acz_A 129 IDT-------SDVEKVKAAWKP------NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK-- 190 (389)
T ss_dssp ECT-------TCHHHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC--
T ss_pred ECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC--
Confidence 875 378999998876 7999999999999999998 8999999999999999999999865421
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCH-HHHHHHHHHhh-cccCCchHHHHHHHHHc
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSA-EVREQIYKVAS-VNLCSNISGQILASLVM 398 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~-~~~~~l~~~~~-~~~~~~~~~q~~~~~~l 398 (434)
+. .++ .+ ++++|+||.+ |.+|.|+ ||+++ ++ ++++.+..... ...+.++..++++...+
T Consensus 191 ~~--------~~~---~d---i~~~S~sK~~-~~~~~~~~G~v~~---~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l 252 (389)
T 3acz_A 191 PL--------ELG---AD---IALHSVSKYI-NGHGDVIGGVSSA---KTAEDIATIKFYRKDAGSLMAPMDAFLCARGM 252 (389)
T ss_dssp GG--------GTT---CS---EEEEETTTTT-TCSSCCCCEEEEE---SSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred cc--------ccC---Ce---EEEECChhhc-cCCCCceeEEEEE---CcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc
Confidence 11 111 33 8899999999 6799998 99987 66 88888877664 34456777777766666
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 399 SPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 399 ~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+. +....++..++...+.+.|+++
T Consensus 253 ~~---l~~r~~~~~~~~~~l~~~l~~~ 276 (389)
T 3acz_A 253 KT---LPIRMQIHMENGLKVAKFLEQH 276 (389)
T ss_dssp TT---HHHHHHHHHHHHHHHHHHHHHC
T ss_pred cH---HHHHHHHHHHHHHHHHHHHHcC
Confidence 43 3345566677777777777764
No 144
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=4.7e-23 Score=208.28 Aligned_cols=268 Identities=12% Similarity=0.042 Sum_probs=180.5
Q ss_pred CCCccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ +.+ .|+.+++++.+.+.... ...| +.....+|++.+++++ + ++++|++|+|+++
T Consensus 54 g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~-~~~~~~~l~~~la~~~----~---~~~~v~~~~sGse 122 (434)
T 3l44_A 54 GNKYIDYLAAYGPIITGHAHPHITKAITTAAENGV---LYGT-PTALEVKFAKMLKEAM----P---ALDKVRFVNSGTE 122 (434)
T ss_dssp CCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCS---CCSS-CCHHHHHHHHHHHHHC----T---TCSEEEEESSHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc---CCCC-CCHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence 3456777766 222 48999999999887642 2334 3444667777777764 3 5789999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCe-EEEEecCCCCCC------------CCCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGGT-LVPYYLDEATGW------------GLETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~------------~~d~~~l~~~l~~~~~~ 267 (434)
++..+++.+.. .++++|++.+|+|..+...+...+.. ...+......++ ..|+++|++++++...
T Consensus 123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~- 201 (434)
T 3l44_A 123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGH- 201 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGG-
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCC-
Confidence 99999987752 26789999999998765443332221 111111000000 0189999999975311
Q ss_pred CCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
++++|+++.++|++|.+. +++++++|.++|++||+++|+||+|.++ ..+. ...+ . .++ ..+| +.
T Consensus 202 --~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~--~~~~-~---~~~-~~~d-----i~ 266 (434)
T 3l44_A 202 --EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY--GGAQ-D---LLG-VTPD-----LT 266 (434)
T ss_dssp --GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS--SCHH-H---HHT-CCCS-----EE
T ss_pred --CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc--cHHH-H---HcC-CCCC-----ee
Confidence 454444444455666655 8889999999999999999999999997 4332 2211 1 111 2244 34
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
||||+| | +|+|+||+++ ++++++.+.+. ...+.+.+++++.++...++..+. ++.+++++++++.+.+.|
T Consensus 267 t~sK~~-~-~G~~iG~~~~---~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L 340 (434)
T 3l44_A 267 ALGKVI-G-GGLPIGAYGG---KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EGLYEKLDELGATLEKGI 340 (434)
T ss_dssp EEEGGG-G-TTSSCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHH
T ss_pred ehhhhh-c-CCcCeeeEEE---cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHH
Confidence 789999 5 7999999987 89998887652 224557889999888777763222 467888888889999888
Q ss_pred HHHHH
Q 013892 423 ARRAK 427 (434)
Q Consensus 423 ~~~~~ 427 (434)
++...
T Consensus 341 ~~~~~ 345 (434)
T 3l44_A 341 LEQAA 345 (434)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 145
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.90 E-value=4.8e-22 Score=197.87 Aligned_cols=212 Identities=13% Similarity=0.129 Sum_probs=164.7
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVP 241 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~ 241 (434)
..+..++++++++++. .+ +.|++++| ++++..+++.++ .+||+|+++.|+|+..... ++..|++++.
T Consensus 51 ~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~-~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 121 (386)
T 1cs1_A 51 NPTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFL-KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_dssp CHHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred CccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHh-CCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence 4568899999999982 22 66777666 899999999987 7999999999999975443 3567899998
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC
Q 013892 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (434)
Q Consensus 242 ~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 321 (434)
++.+ |++.|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 122 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-- 183 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN-- 183 (386)
T ss_dssp ECTT-------CHHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC--
T ss_pred eCCC-------CHHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 8753 79999999976 7899999999999999998 8999999999999999999999865531
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcC
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMS 399 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~ 399 (434)
+ + .++ . .+++.|+||.| |.+|.|+ ||+++ .++++++.+..... .....+.+.++++...++
T Consensus 184 ~---~-----~~~---~---di~~~s~sK~~-~~~~~~~~G~~~~--~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 246 (386)
T 1cs1_A 184 P---L-----ALG---A---DLVLHSCTKYL-NGHSDVVAGVVIA--KDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_dssp G---G-----GGT---C---SEEEEETTTTT-TCSSCCCCEEEEE--SSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT
T ss_pred c---c-----ccC---c---eEEEEcCcccc-cCCCCceeEEEEe--CcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc
Confidence 1 1 111 2 38899999999 6689886 99976 23588888877655 334577777777666654
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 400 PPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 400 ~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++...++...++++.+.+.|++
T Consensus 247 ---~~~~~~~~~~~~~~~l~~~l~~ 268 (386)
T 1cs1_A 247 ---TLVPRMELAQRNAQAIVKYLQT 268 (386)
T ss_dssp ---THHHHHHHHHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhc
Confidence 2345666677777777777665
No 146
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=3.1e-22 Score=199.28 Aligned_cols=206 Identities=15% Similarity=0.214 Sum_probs=158.1
Q ss_pred ccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCC-CCcchHHHHHH
Q 013892 97 DEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYS-HSQGIKGLRDT 175 (434)
Q Consensus 97 ~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~-~~~G~~~lr~~ 175 (434)
.++++++.|.|.. ++.+++++.+.+... .|. +..+..+++++
T Consensus 22 ~~~~~l~~~~p~~-------------------------------~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~~ 64 (391)
T 3dr4_A 22 SDLPRISVAAPRL-------------------------------DGNERDYVLECMDTT------WISSVGRFIVEFEKA 64 (391)
T ss_dssp ------CCCCCCC-------------------------------CSSHHHHHHHHHHHT------CCSSCSHHHHHHHHH
T ss_pred CCCceeccCCCCC-------------------------------CHHHHHHHHHHHHcC------CccCCChHHHHHHHH
Confidence 4688888888865 455888888877652 355 67889999999
Q ss_pred HHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 176 IAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 176 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
+++++. .+++++++|+++++..++..+ + .+||+|+++.|+|+.+...++..|++++.++++++ +|.+|+
T Consensus 65 la~~~~--------~~~~i~~~~gt~al~~~l~~~~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~ 134 (391)
T 3dr4_A 65 FADYCG--------VKHAIACNNGTTALHLALVAMGI-GPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPR-TFNLDA 134 (391)
T ss_dssp HHHHHT--------CSEEEEESSHHHHHHHHHHHHTC-CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCG
T ss_pred HHHHhC--------CCcEEEeCCHHHHHHHHHHHcCC-CCcCEEEECCCchHHHHHHHHHCCCEEEEEecCcc-ccCcCH
Confidence 999982 237888999999999999999 7 79999999999999999999999999999998754 579999
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhC
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMG 334 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~ 334 (434)
++|++++++ ++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|..+......+. .
T Consensus 135 ~~l~~~~~~------~~~~v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~-------~--- 192 (391)
T 3dr4_A 135 AKLEALITP------RTKAIM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGKKS-------G--- 192 (391)
T ss_dssp GGSGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEET-------T---
T ss_pred HHHHHhcCC------CceEEE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCeee-------c---
Confidence 999998875 788777 5689999887 88899999999999999999986332221110 0
Q ss_pred CCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHHHHHHh
Q 013892 335 YGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIYKVA 380 (434)
Q Consensus 335 ~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 380 (434)
...+ +.+.||| |.+ +|.++||++. .++++++.+....
T Consensus 193 -~~~d---i~~~S~s~~K~l---~~g~gg~~~~--~~~~~~~~~~~~~ 231 (391)
T 3dr4_A 193 -SLGD---CATFSFFGNAII---TTGEGGMITT--NDDDLAAKMRLLR 231 (391)
T ss_dssp -SSSS---EEEEECBTTSSS---CCBSCEEEEE--SCHHHHHHHHHHH
T ss_pred -ccCC---EEEEECCCCCcC---CcCCeEEEEE--CCHHHHHHHHHHH
Confidence 1123 6677877 766 4567999875 4677888877654
No 147
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.90 E-value=8.1e-23 Score=206.41 Aligned_cols=269 Identities=13% Similarity=0.081 Sum_probs=178.2
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
..+|+..+ +.+ .++.+++++.+.+..... ....|. .+++.++++.+.+.++ .++++|++|+|+++++
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~-----~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~ 115 (433)
T 1zod_A 44 AILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDH-LFSEML-----SRPVVDLATRLANITP--PGLDRALLLSTGAESN 115 (433)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCC-CCTTCC-----CHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHH
T ss_pred EEEEcccchhccccCCCCHHHHHHHHHHHHhCcc-cccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence 35566544 112 388999999998876421 112332 2445555555555555 4578999999999999
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc--------------CCeEEEEecCCCCCCC--------CCHHHHHHH
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIALH--------------GGTLVPYYLDEATGWG--------LETSEVKKQ 260 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~--------------g~~~~~~~~~~~~~~~--------~d~~~l~~~ 260 (434)
..+++.+.. ..+++|++.+|+|+++....... |+..++++......|+ +|+++|+++
T Consensus 116 ~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~ 195 (433)
T 1zod_A 116 EAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDL 195 (433)
T ss_dssp HHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHH
Confidence 999986531 23589999999998755443322 3333333321111222 368999998
Q ss_pred HHHHHhcCCCeeEEEEecC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 261 LEAAKAKGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
+++. ...++++ ++++| +||||. +.+++++++|.++|++||+++|+||+|.++.+.+. ...+. . .+ ..+
T Consensus 196 l~~~--~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~--~~~~~-~---~~-~~~ 265 (433)
T 1zod_A 196 IDRQ--SSGNLAA-FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT--MFACQ-R---DG-VTP 265 (433)
T ss_dssp HHHH--CCSCEEE-EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHH-H---HT-CCC
T ss_pred HHhc--CCCCeEE-EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch--HhHHh-h---cC-CCC
Confidence 8752 1114555 44566 688996 67889999999999999999999999998655432 22221 1 11 224
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh---hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA---SVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
+ + .||||.| |. |+|+||+++ ++++++.+.... ..+.+.+++++.++..+++.-+. ++..+++++++
T Consensus 266 d--i---~s~sK~~-~~-G~~ig~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~-~~~~~~~~~~~ 334 (433)
T 1zod_A 266 D--I---LTLSKTL-GA-GLPLAAIVT---SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR-DGLVARANVMG 334 (433)
T ss_dssp S--E---EEECHHH-HT-TSSCEEEEE---CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHH
T ss_pred C--E---EEecccc-cC-CCCeeEEEE---hHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHH
Confidence 4 2 3899999 54 999999987 889999887632 13456788888887777653111 24678888888
Q ss_pred HHHHHHHHHHH
Q 013892 416 DGILSSLARRA 426 (434)
Q Consensus 416 ~~l~~~L~~~~ 426 (434)
+.+.+.|++..
T Consensus 335 ~~l~~~l~~l~ 345 (433)
T 1zod_A 335 DRLRRGLLDLM 345 (433)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998887754
No 148
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=8.1e-23 Score=204.84 Aligned_cols=251 Identities=13% Similarity=0.038 Sum_probs=165.0
Q ss_pred CCHHHHHHHHHHHHcCCCC---CCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 140 FSADSIERAWQILDQIPGR---ATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
+|+.+++++.+.+.+.... ....|....+..++++.+.+++.+.+| +++++|++++| ++++..++..++ ++||
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG-t~a~~~~~~~~~-~~gd 112 (417)
T 3n0l_A 37 TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG-SQANQGVYAALI-NPGD 112 (417)
T ss_dssp CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHS-CTTC
T ss_pred CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-HHHHHHHHHHhc-CCCC
Confidence 4888998887777432110 112334444456677666666666666 45667888888 799999999998 7999
Q ss_pred EEEEcCCCChhHHH---HHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 217 GILCPIPQYPLYSA---SIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~---~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
+|+++.|+|..+.. .+... +..+++++++ .+|.+|+++|++++++. ++++|++++|+| |.+.+
T Consensus 113 ~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~--G~~~~--- 180 (417)
T 3n0l_A 113 KILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE-----KPKLIVCGASAY--ARVID--- 180 (417)
T ss_dssp EEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH-----CCSEEEECCSSC--CSCCC---
T ss_pred EEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc-----CCeEEEECCccc--CccCC---
Confidence 99999999987654 33333 4455666665 46789999999999843 789999888887 78888
Q ss_pred HHHHHHHHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
+++|.++|+++|+++|+||+|. +..+.+.. ...+ . ..+ |++.|+||+| +|+|+||+++ .++
T Consensus 181 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~-~~~~----~-----~~d---i~~~s~sK~l---~g~~~G~~~~--~~~ 242 (417)
T 3n0l_A 181 FAKFREIADEIGAYLFADIAHIAGLVVAGEH-PSPF----P-----YAH---VVSSTTHKTL---RGPRGGIIMT--NDE 242 (417)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTHHHHHTTSS-CCCT----T-----TCS---EEEEESSTTT---CSCSCEEEEE--SCH
T ss_pred HHHHHHHHHHcCCEEEEECccchhhhhcccC-CCcc----c-----cce---EEEeeCcccc---CCCCeeEEEE--CCH
Confidence 8999999999999999999964 43343321 1111 0 123 7899999987 4899999977 238
Q ss_pred HHHHHHHHHhh--cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 371 EVREQIYKVAS--VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 371 ~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++++.+..... ....++...+.++...+.. .+.+++.++++.++++.+.+.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (417)
T 3n0l_A 243 ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD 300 (417)
T ss_dssp HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 89988877654 2223444444443333322 122356666777777777777766
No 149
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.90 E-value=1.7e-22 Score=199.74 Aligned_cols=244 Identities=18% Similarity=0.177 Sum_probs=179.8
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL- 210 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l- 210 (434)
|++.+...+++++.+++.+.+... .|.+..+..++++.+++++ | .+++++++|+++++..++..+
T Consensus 6 ~~~~~~~~~~~~v~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~----~----~~~~~~~~sGt~al~~al~~~~ 71 (367)
T 3nyt_A 6 DLKNQQARIKDKIDAGIQRVLRHG------QYILGPEVTELEDRLADFV----G----AKYCISCANGTDALQIVQMALG 71 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC------CCSSCHHHHHHHHHHHHHH----T----CSEEEEESCHHHHHHHHHHHTT
T ss_pred cccccccccCHHHHHHHHHHHhcC------CccCChHHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHhC
Confidence 333333234677888887777652 4667778999999999998 2 247999999999999999998
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 211 IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 211 ~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
+ .+||+|+++.|+|..+...++..|++++.++++++ +|.+|+++|++++++ ++++|+ |+||||...+
T Consensus 72 ~-~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~~~~G~~~~-- 138 (367)
T 3nyt_A 72 V-GPGDEVITPGFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITP------RTKAII---PVSLYGQCAD-- 138 (367)
T ss_dssp C-CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC--
T ss_pred C-CCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCc------CCcEEE---eeCCccChhh--
Confidence 6 79999999999999999999999999999998764 478999999998865 788877 8889998877
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEec
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~ 367 (434)
+++|.++|+++|+++|+|++|..+. +.+. +. + ...+ +++.|| +|.+ |.+|. +||++.
T Consensus 139 -~~~i~~la~~~~~~li~D~a~~~g~~~~~~-~~----------~-~~~d---i~~~Sf~~~K~l-~~~g~-gg~~~~-- 198 (367)
T 3nyt_A 139 -FDAINAIASKYGIPVIEDAAQSFGASYKGK-RS----------C-NLST---VACTSFFPSAPL-GCYGD-GGAIFT-- 198 (367)
T ss_dssp -HHHHHHHHHHTTCCBEEECTTTTTCEETTE-ET----------T-SSSS---EEEEECCTTSSS-CCSSC-CEEEEE--
T ss_pred -HHHHHHHHHHcCCEEEEECccccCCeECCe-ec----------c-CCCC---EEEEECCCCCcC-CCcCc-eeEEEe--
Confidence 8889999999999999999998532 3221 11 0 0123 778897 8999 64577 898865
Q ss_pred CCHHHHHHHHHHhhc-------------ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEVREQIYKVASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 368 ~~~~~~~~l~~~~~~-------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.++++++.+...... ....+.+.++++...++. +++..++.++.++.+.+.|++.
T Consensus 199 ~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~---~~~~~~~~~~~~~~~~~~L~~~ 266 (367)
T 3nyt_A 199 NDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEI---FEEEIALRQKVAAEYDLSLKQV 266 (367)
T ss_dssp SCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccC
Confidence 468888888775431 234556666555555532 2344444555555555555543
No 150
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.89 E-value=1.9e-23 Score=208.21 Aligned_cols=251 Identities=11% Similarity=0.009 Sum_probs=170.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh---cCCC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RSEN 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~~~g 215 (434)
.+|+.+++++.+.+.+........|....+..++.+.+.+++.+.+| +++++|++|+|+++++..++++++ .++|
T Consensus 31 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~g~t~al~~~~~~l~~~~~~~g 108 (400)
T 3vax_A 31 RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVS--AEPDELIFTSGATESNNIALLGLAPYGERTG 108 (400)
T ss_dssp SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGEEEESCHHHHHHHHHHTTHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcC--CCCCcEEEeCCHHHHHHHHHHHHHHhhccCC
Confidence 46888999988887642110111232222333444555555555455 467899999999999999999875 1489
Q ss_pred C-EEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 216 D-GILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 216 d-~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
| +|+++.++|+.+...+.. .|++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 109 d~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~--- 177 (400)
T 3vax_A 109 RRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRP------DTLLVSLMHVNNETGVIQP--- 177 (400)
T ss_dssp CCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCT------TEEEEECCSBCTTTCBBCC---
T ss_pred CCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCC------CceEEEEECCCCCceeeCc---
Confidence 9 999999999988766554 599999999875 468899999999876 7999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE-EecCCH
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME-VTGFSA 370 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~-~~~~~~ 370 (434)
+++|.++|+++|+++|+||+|...... . .+... .+ +++.|+||.+ |.+| +|+++ +. ++
T Consensus 178 l~~i~~la~~~~~~li~D~a~~~~~~~-----~-------~~~~~-~d---~~~~s~~K~~-g~~g--~g~~~~~~--~~ 236 (400)
T 3vax_A 178 VAELAQQLRATPTYLHVDAAQGYGKVP-----G-------DLTTP-ID---MISISGHKIG-APKG--VGALVTRR--RE 236 (400)
T ss_dssp HHHHHHHHTTSSCEEEEECTTTTTTSG-----G-------GGGSC-CS---EEEEETGGGT-SCSS--CEEEEECB--CS
T ss_pred HHHHHHHHHhcCCEEEEEhhhhcCCCC-----c-------Chhhc-Cc---EEEEeHHHhC-CCCc--eEEEEEec--ch
Confidence 789999999999999999999842211 1 11111 23 7889999965 6556 45554 41 21
Q ss_pred HHH---HHHHHH--------hhcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHH
Q 013892 371 EVR---EQIYKV--------ASVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 371 ~~~---~~l~~~--------~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
++. ..+... ......++...+.++...++. .+.+++.+++++++++.+.+.|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 301 (400)
T 3vax_A 237 EMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA 301 (400)
T ss_dssp SSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT
T ss_pred hccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC
Confidence 111 111111 112334566666655554432 12346677778888888877776
No 151
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.89 E-value=2.9e-22 Score=200.91 Aligned_cols=215 Identities=14% Similarity=0.165 Sum_probs=163.8
Q ss_pred CCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCC
Q 013892 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGG 237 (434)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~ 237 (434)
.|+ ..+..++++++++++ | .+ +.|++++| ++++..++. ++ ++||+|+++.|+|+.....+ +..|+
T Consensus 63 r~~-~p~~~~l~~~la~~~----g--~~-~~i~~~sG-~~ai~~~~~-l~-~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 63 RSG-NPTRNCLEKAVAALD----G--AK-YCLAFASG-LAATVTITH-LL-KAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp ----CHHHHHHHHHHHHHH----T--CS-EEEEESCH-HHHHHHHHT-TS-CTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred CCC-CchHHHHHHHHHHHh----C--CC-cEEEECCH-HHHHHHHHH-Hh-CCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 344 356789999999998 2 12 56777776 589999998 77 79999999999999755543 56799
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEccCCCCCc
Q 013892 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG-LVLLADEVYQENV 316 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~~~~ 316 (434)
+++.++++ |+++|++++++ ++++|++++|+||||.+++ +++|+++|+++| +++|+||+|..+.
T Consensus 132 ~v~~v~~~-------d~~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~ 195 (403)
T 3cog_A 132 KISFVDCS-------KIKLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPY 195 (403)
T ss_dssp EEEEECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTT
T ss_pred EEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccc
Confidence 99998864 78999988875 7999999999999999998 999999999999 9999999999865
Q ss_pred cCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHH
Q 013892 317 YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILA 394 (434)
Q Consensus 317 ~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~ 394 (434)
+... . .++ . .|+++|+||.|+ .+| .|+||+++ .++++++.+..... ...+.+++.++++
T Consensus 196 ~~~~--~--------~~~---~---div~~S~sK~~~-g~~~~~~G~v~~--~~~~l~~~l~~~~~~~g~~~~~~~~~~~ 256 (403)
T 3cog_A 196 FQRP--L--------ALG---A---DISMYSATKYMN-GHSDVVMGLVSV--NCESLHNRLRFLQNSLGAVPSPIDCYLC 256 (403)
T ss_dssp TCCT--T--------TTT---C---SEEEEETTTTTT-CSSCCCCEEEEE--CCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred cCCc--c--------ccC---C---eEEEEcChhhcc-CCCCCeEEEEEE--CcHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4321 1 011 2 389999999994 455 58999976 35788888877655 4446778888887
Q ss_pred HHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 395 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
...++. +....++..++...+.+.|+++
T Consensus 257 ~~~l~~---l~~r~~~~~~n~~~l~~~l~~~ 284 (403)
T 3cog_A 257 NRGLKT---LHVRMEKHFKNGMAVAQFLESN 284 (403)
T ss_dssp HHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhhhhH---HHHHHHHHHHHHHHHHHHHhcC
Confidence 777753 3345566666666676666654
No 152
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.89 E-value=7.3e-23 Score=211.66 Aligned_cols=259 Identities=12% Similarity=0.085 Sum_probs=182.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCE--EEcCChHHHHHHHHHHHhcCCC---
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDI--FLTDGASPAVHMMMQLLIRSEN--- 215 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i--~~t~G~~~al~~~l~~l~~~~g--- 215 (434)
.+.+.+.+.+.+..........|....+..++++++++++.+.+|.+.+++++ ++|+|+++++..+++++. .+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~-~~g~~~ 187 (514)
T 3mad_A 109 DEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR-DWARAT 187 (514)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH-HHHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH-HHhhhh
Confidence 35555555555543221124456666778899999999999988876666788 999999999999999987 455
Q ss_pred -----CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 216 -----DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 216 -----d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
|+|+++.|+|..+...++..|++++.+++++ +|.+|+++|++++++ ++++|++++|+||||.+.+
T Consensus 188 ~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~-- 257 (514)
T 3mad_A 188 KGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP-- 257 (514)
T ss_dssp HCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC--
T ss_pred cCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC--
Confidence 8999999999999999999999999999876 578999999999976 7999999999999999998
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccC---CCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENVYV---PEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~~~---~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
+++|.++|+++|+++|+||+|.++.+. ..+ +...+ .....++ .+++.|++|.+. .|.++||+++
T Consensus 258 -l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~-------~~~~~g~-d~~~~s~~K~l~--~~~~~g~~~~- 325 (514)
T 3mad_A 258 -IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPF-------DFRLEGV-TSVSADTHKYGY--GAKGTSVILY- 325 (514)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCC-------STTSTTC-CEEEECTTTTTC--CCSSCEEEEE-
T ss_pred -HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcc-------cccCCCC-cEEEECchhccC--CCCCeEEEEE-
Confidence 899999999999999999999987652 000 00011 0011222 377889999863 5889999976
Q ss_pred cCCHHHHHHHHHHh---------h--cccCCc---hHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVA---------S--VNLCSN---ISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 367 ~~~~~~~~~l~~~~---------~--~~~~~~---~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
.++.+........ . .....+ ..++.++...+.. ...++..++..++++.+.+.|++
T Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~ 395 (514)
T 3mad_A 326 -RRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGE-EGYLDATRRILQAADRLKAGVRA 395 (514)
T ss_dssp -SSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 2443332111000 0 011122 2334444333321 22345666777777777777765
No 153
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.89 E-value=6.8e-22 Score=195.31 Aligned_cols=192 Identities=15% Similarity=0.211 Sum_probs=153.2
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEEE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGIL 219 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~Vl 219 (434)
++ +.+++.+.+... .|.+..+..++++++++++ | .+++++++|+++++..++..+ + .+||+|+
T Consensus 19 ~~-~~~~~~~~~~~~------~~~~~~~~~~l~~~la~~~----~----~~~~~~~~~gt~a~~~~~~~~~~-~~gd~v~ 82 (374)
T 3uwc_A 19 EP-YLNDLREFIKTA------DFTLGAELEKFEKRFAALH----N----APHAIGVGTGTDALAMSFKMLNI-GAGDEVI 82 (374)
T ss_dssp HH-HHHHHHHHHHHT------CCSSCHHHHHHHHHHHHHT----T----CSEEEEESCHHHHHHHHHHHTTC-CTTCEEE
T ss_pred hH-HHHHHHHHHHcC------CcccChhHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHcCC-CCCCEEE
Confidence 45 777777777642 4777888999999999997 2 237889999999999999998 7 7999999
Q ss_pred EcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHH
Q 013892 220 CPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFC 299 (434)
Q Consensus 220 v~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~ 299 (434)
++.|+|+.+...++..|++++.++++ .++.+|+++|++++++ ++++|+ |+||||.+.+ +++|.++|
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~------~~~~v~---~~n~~G~~~~---~~~i~~~~ 148 (374)
T 3uwc_A 83 TCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD------KTKAIM---PVHYTGNIAD---MPALAKIA 148 (374)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC------CceEEE---EeCCcCCcCC---HHHHHHHH
Confidence 99999999999999999999999987 4578999999998876 688777 8999999987 88999999
Q ss_pred HHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHHHH
Q 013892 300 KKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 300 ~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l~ 377 (434)
+++|+++|+||+|..+..-+..+. . ...+ +++.|++ |.+ |.+|. +||++. .++++++.+.
T Consensus 149 ~~~~~~li~D~~~~~g~~~~~~~~----------~-~~~d---~~~~s~~~~K~l-~~~g~-~g~~~~--~~~~~~~~~~ 210 (374)
T 3uwc_A 149 KKHNLHIVEDACQTILGRINDKFV----------G-SWGQ---FACFSLHPLKNL-NVWSD-AGVIIT--HSDEYAEKLR 210 (374)
T ss_dssp HHTTCEEEEECTTCTTCEETTEET----------T-SSSS---EEEEECSSSSSS-CCSSC-CEEEEE--SCHHHHHHHH
T ss_pred HHcCCEEEEeCCCccCceeCCeec----------c-cccc---EEEEeCCCCCcC-Cccce-eEEEEe--CCHHHHHHHH
Confidence 999999999999987533211111 0 1123 6778866 998 53466 888865 4677888877
Q ss_pred HHh
Q 013892 378 KVA 380 (434)
Q Consensus 378 ~~~ 380 (434)
...
T Consensus 211 ~~~ 213 (374)
T 3uwc_A 211 LYR 213 (374)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
No 154
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.89 E-value=2.4e-22 Score=202.92 Aligned_cols=267 Identities=15% Similarity=0.107 Sum_probs=183.1
Q ss_pred CCCccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ +.+ .|+.+++++.+.+.+.. .. |.+..+..+|++.+++++ + .+++|++|+|+++
T Consensus 52 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~~-~~~~~~~~~l~~~la~~~----~---~~~~v~~~~~Gse 120 (429)
T 3k28_A 52 GNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGT---SF-GAPTEIENKLAKLVIERV----P---SIEIVRMVNSGTE 120 (429)
T ss_dssp CCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCS---CC-SSCCHHHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred CCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCc---Cc-CCCCHHHHHHHHHHHHhC----C---CCCEEEEeCChHH
Confidence 4456777766 223 58999999999888742 22 334555777888888775 2 4689999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCCeEEEEecCCCCCCC------------CCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGGTLVPYYLDEATGWG------------LETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~------------~d~~~l~~~l~~~~~~ 267 (434)
++..+++.+.. .++++|++.+|+|..+...+.. .|..+..+......++. -|+++|++.++....
T Consensus 121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~- 199 (429)
T 3k28_A 121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD- 199 (429)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG-
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC-
Confidence 99999988752 2568999999999865433222 22211111111111110 179999999875311
Q ss_pred CCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 268 GITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
++++|+++.++|++|.+. +++++++|.++|++||+++|+||+|.++ ..+. .... ...+ ..++ +.
T Consensus 200 --~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~--~~~~----~~~~-~~~d-----i~ 264 (429)
T 3k28_A 200 --DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY--NCGQ----GYYG-VTPD-----LT 264 (429)
T ss_dssp --GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST--THHH----HHHT-CCCS-----EE
T ss_pred --CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc--chHH----HHhC-CCCc-----ee
Confidence 454444444455566555 5788999999999999999999999987 4432 1111 1111 2244 23
Q ss_pred cCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh----hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHH
Q 013892 347 SVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA----SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSL 422 (434)
Q Consensus 347 S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L 422 (434)
+|||+| | .|+|+||+++ ++++++.+.... ..+.+.+++++.++...++..+ ++.+++++++++.+.+.|
T Consensus 265 t~sK~~-~-~G~~iG~~~~---~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~--~~~~~~~~~~~~~l~~~L 337 (429)
T 3k28_A 265 CLGKVI-G-GGLPVGAYGG---KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT--PESYVEFERKAEMLEAGL 337 (429)
T ss_dssp EECGGG-G-TTSCCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC--HHHHHHHHHHHHHHHHHH
T ss_pred hhhhhh-c-CCCCeEEEEE---cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 789999 5 4999999987 899988876532 2345789999999988887654 788899999999999999
Q ss_pred HHHHH
Q 013892 423 ARRAK 427 (434)
Q Consensus 423 ~~~~~ 427 (434)
++...
T Consensus 338 ~~~~~ 342 (429)
T 3k28_A 338 RKAAE 342 (429)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88743
No 155
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.89 E-value=2e-22 Score=204.90 Aligned_cols=269 Identities=15% Similarity=0.116 Sum_probs=182.7
Q ss_pred CCCccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ +. ..|+.+++++.+.+.... + ....+..+.+.++++++.+.++. +.+ |++|+|+++
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~----~--~~~~~~~~~~~~la~~l~~~~~~--~~~-v~~~~ggse 118 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLS----Y--FPMSQSHEPAIKLAEKLNEWLGG--EYV-IFFSNSGSE 118 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCC----C--CCTTSEEHHHHHHHHHHHHHHTS--CEE-EEEESSHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcC----C--cccccCCHHHHHHHHHHHHhCCC--Cce-EEEeCchHH
Confidence 3446777666 22 247899999999887532 1 22234456666666666666553 344 999999999
Q ss_pred HHHHHHHHHhc----C---CCCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCCCCC-C-------
Q 013892 202 AVHMMMQLLIR----S---ENDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGL-E------- 253 (434)
Q Consensus 202 al~~~l~~l~~----~---~gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-d------- 253 (434)
++..+++.+.. . ++++|++.+|+|+.+.......+.. +..++....-.+.. |
T Consensus 119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 99999998751 2 6799999999999877655554432 22333211101111 2
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
+++|+++++... ..++++|+++.+ +| ||.++ +++.+++|.++|++||+++|+||+|.++.+.+. ....
T Consensus 199 ~~~~~le~~l~~~~--~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~~~~--- 270 (452)
T 3n5m_A 199 ECVKEVDRVMTWEL--SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK--AFGF--- 270 (452)
T ss_dssp HHHHHHHHHHHHHC--GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGG---
T ss_pred HHHHHHHHHHHhcC--CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc--cchh---
Confidence 899999987211 115777777777 89 99766 888899999999999999999999999655543 2111
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH---H----hhcccCCchHHHHHHHHHcCCC
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK---V----ASVNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~---~----~~~~~~~~~~~q~~~~~~l~~~ 401 (434)
...+ ..++ + .+|||++ |. | +|+||+++ ++++++.+.. . ...+.+.++++++++..+++..
T Consensus 271 -~~~~-~~~d--i---~t~sK~l-~~-G~~~ig~~~~---~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 338 (452)
T 3n5m_A 271 -MNYD-VKPD--I---ITMAKGI-TS-AYLPLSATAV---KREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEII 338 (452)
T ss_dssp -GGTT-CCCS--E---EEECGGG-GT-TSSCCEEEEE---EHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHH
T ss_pred -hhcC-CCCC--E---Eeecccc-cC-CCcceEEEEE---CHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHH
Confidence 1111 2244 2 3689999 54 9 99999987 8999988843 1 2245578899999888877632
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+. ++..++.+++++.+++.|++.
T Consensus 339 ~~-~~~~~~~~~~~~~l~~~L~~~ 361 (452)
T 3n5m_A 339 EN-ENLIERSAQMGSLLLEQLKEE 361 (452)
T ss_dssp HH-TTHHHHHHHHHHHHHHHHHHH
T ss_pred Hh-ccHHHHHHHHHHHHHHHHHHH
Confidence 11 356677777777888777765
No 156
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.89 E-value=3.5e-22 Score=203.65 Aligned_cols=272 Identities=13% Similarity=0.005 Sum_probs=182.6
Q ss_pred CCccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
..+||+..+ +. ..++.+++++.+.+.+.. ..|....+..++++++++++.+..+ .+.++|++|+|++++
T Consensus 51 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA 124 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLA----YYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDA 124 (460)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHS----CCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc----ccccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHH
Confidence 446777665 22 347999999999887642 2344445556677778887777643 467799999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCC-------------eEEEEecCC---CCCCCCC------
Q 013892 203 VHMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE---ATGWGLE------ 253 (434)
Q Consensus 203 l~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~d------ 253 (434)
+..+++.+.. .++++|++.+|+|+.+.......+. .+..++... .++++.+
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 9999998862 2469999999999987665554422 233443221 0112334
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
+++|+++++.... .++++|+++.++|++|. +++++.+++|.++|++||+++|+||+|.++.+.+. +..+
T Consensus 205 ~~~~~le~~i~~~~~--~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~~~---- 276 (460)
T 3gju_A 205 HCADKLEEMILAEGP--ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT--MFGS---- 276 (460)
T ss_dssp HHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHH----
T ss_pred HHHHHHHHHHHhcCC--CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--cchH----
Confidence 5788888874211 15666666555777776 77888899999999999999999999999655443 2222
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHcCCC
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~ 401 (434)
...+ ..+| + .+|||+++ .| +|+||+++ ++++++.+... ...+.+.+++++.++..+|+..
T Consensus 277 ~~~~-~~pd--i---~t~sK~l~--gG~~~lg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 345 (460)
T 3gju_A 277 DHYG-IKPD--L---ITIAKGLT--SAYAPLSGVIV---ADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELI 345 (460)
T ss_dssp HHHT-CCCS--E---EEECGGGT--TTSSCCEEEEE---EHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHH
T ss_pred hhcC-CCCC--e---eeeehhhc--CCCCCeEEEEE---CHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 1111 2355 2 26899994 36 89999988 89999998632 2245678899999888888631
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+. ++..++.+++.+.+++.|.+.
T Consensus 346 ~~-~~~~~~~~~~~~~~~~~l~~~ 368 (460)
T 3gju_A 346 DE-MDLVTNAGETGAYFRAELAKA 368 (460)
T ss_dssp HH-TTHHHHHHHHHHHHHHHHHHH
T ss_pred Hh-ccHHHHHHHHHHHHHHHHHHH
Confidence 11 234555555555555555443
No 157
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=2e-22 Score=201.97 Aligned_cols=251 Identities=14% Similarity=0.112 Sum_probs=170.4
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCC-C-CCC--CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRAT-G-AYS--HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHM 205 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~-~-~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 205 (434)
.+|+++.+ ..|+.+++++.+.+........ . .|. ...+..++++.+++++ | +++++|++|+|+++++..
T Consensus 31 yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~al~~ 103 (416)
T 1qz9_A 31 YLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVTDTTSINLFK 103 (416)
T ss_dssp ECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEECSCHHHHHHH
T ss_pred eecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEeCChhHHHHH
Confidence 33443333 5677899999888875211000 0 111 1133455666665554 5 457899999999999988
Q ss_pred HHHHHh-c----CCCCE-EEEcCCCChhHHHHH----HHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE
Q 013892 206 MMQLLI-R----SENDG-ILCPIPQYPLYSASI----ALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (434)
Q Consensus 206 ~l~~l~-~----~~gd~-Vlv~~p~y~~~~~~~----~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~ 273 (434)
++..++ . .+||+ |+++.++|+.+...+ +.. |++++.+++ +++|++++++ ++++
T Consensus 104 al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~------~~~~ 168 (416)
T 1qz9_A 104 VLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQ------DTAV 168 (416)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCST------TEEE
T ss_pred HHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCC------CceE
Confidence 888764 1 47886 556667888655433 234 999998875 5677777765 7999
Q ss_pred EEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 274 LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 274 i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
|++++|+||||.+++ +++|.++|+++|+++|+||+|.. +.. ...+. .++ .+ +++.|++|.+.
T Consensus 169 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~--~~~~~----~~~---~d---~~~~s~~K~l~ 230 (416)
T 1qz9_A 169 VMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA---GAV--PVDLH----QAG---AD---YAIGCTYKYLN 230 (416)
T ss_dssp EEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT---TTS--CCCHH----HHT---CS---EEEECSSSTTC
T ss_pred EEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc---cCc--CCChh----hcC---CC---EEEecCcccCC
Confidence 999999999999999 89999999999999999999974 211 11221 222 33 77889999874
Q ss_pred CCCCcee-EEEEEecCCHHHHHHHHHHh-----------------------h-cccCCchHHHHHHHHHcCCC--CCChH
Q 013892 354 GECGKRG-GYMEVTGFSAEVREQIYKVA-----------------------S-VNLCSNISGQILASLVMSPP--KVGDE 406 (434)
Q Consensus 354 g~~G~R~-G~~~~~~~~~~~~~~l~~~~-----------------------~-~~~~~~~~~q~~~~~~l~~~--~~~~~ 406 (434)
+|.++ ||+++ ++++++.+.... . ...+++..++.++..+++.. +.+++
T Consensus 231 --~g~~~~g~l~~---~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 305 (416)
T 1qz9_A 231 --GGPGSQAFVWV---SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMAS 305 (416)
T ss_dssp --CCTTCCCEEEE---CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHH
T ss_pred --CCCCCeEEEEE---CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 57888 99987 777766554320 1 12345666666555555431 34567
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013892 407 SYESYCAERDGILSSLARR 425 (434)
Q Consensus 407 ~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++++++++.+.+.|++.
T Consensus 306 ~~~~~~~~~~~l~~~L~~~ 324 (416)
T 1qz9_A 306 LRRKSLALTDLFIELVEQR 324 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 8889999999999998875
No 158
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.89 E-value=2.6e-22 Score=195.21 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEEEecCC
Q 013892 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYLDE 246 (434)
Q Consensus 171 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~ 246 (434)
++++.+++++ | .+ +.+++++| ++++..++..++ .+||+|+++.|+|+.+...+ +..|++++.++.
T Consensus 2 ~l~~~la~~~----g--~~-~~i~~~sG-~~a~~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 70 (331)
T 1pff_A 2 ALEGKIAKLE----H--AE-ACAATASG-MGAIAASVWTFL-KAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHHH----T--CS-EEEEESSH-HHHHHHHHHHHC-CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT--
T ss_pred hHHHHHHHHh----C--CC-eEEEeCCh-HHHHHHHHHHhc-CCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC--
Confidence 5889999987 3 22 55656555 899999999887 79999999999999987765 457999998875
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEccCCCCCccCCCCCccc
Q 013892 247 ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADEVYQENVYVPEKKFHS 325 (434)
Q Consensus 247 ~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~Deay~~~~~~~~~~~~s 325 (434)
.|++++++++++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|..+.+.. +
T Consensus 71 -----~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~-----~ 131 (331)
T 1pff_A 71 -----AVPGNIEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN-----P 131 (331)
T ss_dssp -----TSTTHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC-----G
T ss_pred -----CCHHHHHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC-----h
Confidence 367888888865 7999999999999999998 8999999999 999999999998754421 1
Q ss_pred hHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCH-HHHHHHHHHhhc--ccCCchHHHHHHHHHcCCC
Q 013892 326 FKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSA-EVREQIYKVASV--NLCSNISGQILASLVMSPP 401 (434)
Q Consensus 326 ~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~-~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~ 401 (434)
+ ..+ . .+++.|+||.| |.+|.| +||+++ ++ ++++.+...... ..+.+.+.++++...++.
T Consensus 132 ~-----~~~---~---d~~~~s~~K~~-~~~~~r~~G~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~- 195 (331)
T 1pff_A 132 L-----DLG---V---DIVVHSATKYI-NGHTDVVAGLVCS---RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT- 195 (331)
T ss_dssp G-----GGT---C---SEEEEETTTTT-SSSSSCCCEEEEE---CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-
T ss_pred h-----hcC---C---cEEEEECcccc-CCCCCceEEEEEe---CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-
Confidence 1 111 2 38899999999 679999 899987 77 888888776544 346777777766555531
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
....++...++.+.+.+.|+++
T Consensus 196 --~~~~~~~~~~~~~~~~~~l~~~ 217 (331)
T 1pff_A 196 --LDMRVKRAAENAQKVAEFLHEH 217 (331)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 2344555666666666666554
No 159
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.89 E-value=1.2e-21 Score=196.07 Aligned_cols=212 Identities=15% Similarity=0.163 Sum_probs=162.5
Q ss_pred CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEE
Q 013892 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLV 240 (434)
Q Consensus 165 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~ 240 (434)
+.....++++.+++++ | .+ +.++++++++++..++..++ .+||+|+++.|+|+.+...+ ...|++++
T Consensus 63 ~~~~~~~l~~~la~~~----g--~~--~~i~~~sG~~a~~~~l~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~ 133 (398)
T 1gc0_A 63 SNPTLNLLEARMASLE----G--GE--AGLALASGMGAITSTLWTLL-RPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLR 133 (398)
T ss_dssp CCHHHHHHHHHHHHHH----T--CS--EEEEESSHHHHHHHHHHHHC-CTTCEEEEESSCCSHHHHHHHHTGGGGTCEEE
T ss_pred CChHHHHHHHHHHHHh----C--CC--cEEEECCHHHHHHHHHHHHh-cCCCEEEEeCCCchhHHHHHHHHHHHcCCEEE
Confidence 3455778888888886 3 22 44555555799999999988 79999999999999987776 56799999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCC
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPE 320 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~ 320 (434)
.++.+ |+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+...
T Consensus 134 ~~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~ 197 (398)
T 1gc0_A 134 HVDMA-------DLQALEAAMTP------ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRP 197 (398)
T ss_dssp EECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCG
T ss_pred EECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 88753 78999998876 7999999999999999998 99999999999999999999997654321
Q ss_pred CCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHH-HHHHHhhc--ccCCchHHHHHHHH
Q 013892 321 KKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVRE-QIYKVASV--NLCSNISGQILASL 396 (434)
Q Consensus 321 ~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~-~l~~~~~~--~~~~~~~~q~~~~~ 396 (434)
+ .++ .+ +++.|+||.| |.+|.|+ ||+++ +++.++ .+...... ....+++.++++..
T Consensus 198 -----~-----~~~---~d---~~~~S~sK~~-~~~~~~~~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 1gc0_A 198 -----L-----ELG---AD---LVVHSATKYL-SGHGDITAGIVVG---SQALVDRIRLQGLKDMTGAVLSPHDAALLMR 257 (398)
T ss_dssp -----G-----GGT---CS---EEEEETTTTT-TCSSSCCCEEEEE---CHHHHHHHHHTHHHHHTCCCCCHHHHHHHHH
T ss_pred -----h-----hhC---ce---EEEECCcccc-CCCCCCeEEEEEE---ChHHHHHHHHHHhhccCCCCCCHHHHHHHHh
Confidence 1 111 23 8899999999 6789997 99977 777665 45544332 34567777777766
Q ss_pred HcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 397 VMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 397 ~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
.++. +...++...++.+.+.+.|++
T Consensus 258 ~l~~---~~~~~~~~~~~~~~l~~~L~~ 282 (398)
T 1gc0_A 258 GIKT---LNLRMDRHCANAQVLAEFLAR 282 (398)
T ss_dssp HHTT---HHHHHHHHHHHHHHHHHHHHT
T ss_pred ccch---HHHHHHHHHHHHHHHHHHHhc
Confidence 6642 346667777778888777766
No 160
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.89 E-value=7.9e-23 Score=200.91 Aligned_cols=227 Identities=14% Similarity=0.106 Sum_probs=156.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC--EEEEcCCCChhHHH---HHHH
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND--GILCPIPQYPLYSA---SIAL 234 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd--~Vlv~~p~y~~~~~---~~~~ 234 (434)
...|++..+..+|++++++++ | . +..++++|+++++..+++.++ .+|| .|+++.++|..+.. ....
T Consensus 40 ~~~y~~~~~~~~l~~~la~~~----~--~--~~~i~~~~G~~a~~~al~~~~-~~gd~~~vi~~~~~~~~~~~~~~~~~~ 110 (357)
T 3lws_A 40 SDQYGTGAIIEPFEQKFADVL----G--M--DDAVFFPSGTMAQQVALRIWS-DETDNRTVAYHPLCHLEIHEQDGLKEL 110 (357)
T ss_dssp CEETTEETTHHHHHHHHHHHH----T--C--SEEEEESCHHHHHHHHHHHHH-HHHTCCEEEECTTCHHHHSSTTHHHHH
T ss_pred cccccCChHHHHHHHHHHHHh----C--C--CcEEEecCcHHHHHHHHHHHh-hcCCCcEEEecccceeeeeccchhhhc
Confidence 456887778999999999997 3 1 233445677789999998887 5777 77777777654433 4556
Q ss_pred cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 235 HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 235 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
.|++++.++.+ ++.+|+++|+++ . ++++|++++||||| |.+++.+++++|+++|++||++||+||+|.
T Consensus 111 ~g~~~~~v~~~---~~~~d~~~l~~~--~------~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 179 (357)
T 3lws_A 111 HPIETILVGAA---DRLMTLDEIKAL--P------DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARL 179 (357)
T ss_dssp SSCEEEECSCT---TSCCCHHHHHTC--C------SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTH
T ss_pred cCcEEEEecCC---CCCcCHHHHhcC--c------CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchh
Confidence 79999888742 347999999876 1 48899999999998 999999999999999999999999999987
Q ss_pred CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cc--cCCchHH
Q 013892 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VN--LCSNISG 390 (434)
Q Consensus 314 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~--~~~~~~~ 390 (434)
....... ..+...+.. . .+ +++.|+||.|+|+. +||++. ++++++.+.+.+. .. .......
T Consensus 180 ~~~~~~~--~~~~~~~~~----~-~d---~~~~s~sK~~~~~~---gg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (357)
T 3lws_A 180 FEMLPYY--EKTAAEIAG----L-FD---SIYISFYKGLGGIA---GAILAG---PAAFCQTARIWKRRYGGDLISLYPY 243 (357)
T ss_dssp HHHHHHH--TCCHHHHHT----T-SS---EEEEESSSTTCCSS---CEEEEE---CHHHHHHHHHHHHHTTCCCSCCHHH
T ss_pred hhhhhhc--CCChHHHHh----c-CC---EEEEeccccCCCCc---eEEEEc---CHHHHHHHHHHHHHhcCCcccchHH
Confidence 2111100 011222221 1 23 34789999985433 399977 9999999887654 22 1222333
Q ss_pred HHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 391 QILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 391 q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.++...++. +. +..+++.++++.+.+.|+++
T Consensus 244 ~~~~~~~l~~--~~-~~~~~~~~~~~~l~~~L~~~ 275 (357)
T 3lws_A 244 IVSADYYYEL--RK-DRMGQYYEQAKQLAEQFNAL 275 (357)
T ss_dssp HHHHHHHHHH--HT-TCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHhC
Confidence 3333344432 22 23445677888888888764
No 161
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.89 E-value=1.8e-22 Score=201.31 Aligned_cols=257 Identities=13% Similarity=0.084 Sum_probs=177.4
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.+|||+.+ +.+ .++++++++.+.++... +.| ..+..++++++++++.+.+| ++++++|+|+++++
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~----~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea~ 106 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL----HTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTESI 106 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS----CCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHHH
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc----ccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHH
Confidence 35676665 222 47899999999887532 122 12234555666666655555 57999999999999
Q ss_pred HHHHHHHhc------CCCCEEEEcCCCChhHHHHHHHcC-------------CeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 204 HMMMQLLIR------SENDGILCPIPQYPLYSASIALHG-------------GTLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 204 ~~~l~~l~~------~~gd~Vlv~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
..+++.+.. .++++|++.+|+|+.+.......+ ..+..++. .|+++|++++++
T Consensus 107 ~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~- 178 (395)
T 3nx3_A 107 EGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE- 178 (395)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT-
T ss_pred HHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC-
Confidence 999987752 247999999999987654443332 34444442 278999998865
Q ss_pred HhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEE
Q 013892 265 KAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLV 343 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i 343 (434)
++++|+++.++|++|.+ ++++++++|.++|++||+++|+||+|.++.+.+. ..... ..+ ..++
T Consensus 179 -----~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~----~~~-~~~d---- 242 (395)
T 3nx3_A 179 -----KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK--FFAYE----HAQ-ILPD---- 242 (395)
T ss_dssp -----TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGG----GGT-CCCS----
T ss_pred -----CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc--chhHH----hcC-CCCC----
Confidence 78888888777777776 6788899999999999999999999998654432 21111 111 1234
Q ss_pred EEecCCCCCCCCCCceeEEEEEecCCHHH-HHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHH
Q 013892 344 SFQSVSKGYYGECGKRGGYMEVTGFSAEV-REQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSS 421 (434)
Q Consensus 344 ~i~S~SK~~~g~~G~R~G~~~~~~~~~~~-~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 421 (434)
+.||||.| | .|+|+||+++ ++++ ++.+..... ...+.+++++.++..+++..+. ++..++.++.++.+++.
T Consensus 243 -~~t~sK~~-~-~G~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~ 315 (395)
T 3nx3_A 243 -IMTSAKAL-G-CGLSVGAFVI---NQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNKLTPYLEQS 315 (395)
T ss_dssp -EEEECGGG-T-TTSCCEEEEE---CHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHH
T ss_pred -EEEecccc-c-CCCceEEEEE---chhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Confidence 34789999 5 4999999987 8888 787765432 4557889999888877752111 24556666667777777
Q ss_pred HHHHH
Q 013892 422 LARRA 426 (434)
Q Consensus 422 L~~~~ 426 (434)
|++..
T Consensus 316 l~~~~ 320 (395)
T 3nx3_A 316 LDELI 320 (395)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 162
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.89 E-value=2.7e-22 Score=204.46 Aligned_cols=268 Identities=16% Similarity=0.117 Sum_probs=180.9
Q ss_pred CCccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ +. ..++++++++.+.+.+.. ..|....+..+.++++++++.+.++ .+.++|++|+|++++
T Consensus 50 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA 123 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP----FYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSES 123 (459)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCS----CCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHH
T ss_pred CEEEECCCchhcccCCCCCHHHHHHHHHHHHhcc----ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 346777665 12 247999999999988742 2344444556777888888877654 456799999999999
Q ss_pred HHHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCC-------------eEEEEecCC--C-CCCCCC------
Q 013892 203 VHMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGG-------------TLVPYYLDE--A-TGWGLE------ 253 (434)
Q Consensus 203 l~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d------ 253 (434)
+..+++.+.. .++++|++.+|+|+++.......+. .+..++... . +.+ +|
T Consensus 124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~ 202 (459)
T 4a6r_A 124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV 202 (459)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence 9999999872 1579999999999987766555432 222333211 0 112 34
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
+++|++.+++... .++ ++++++| +|++|. +.+++++++|.++|++||+++|+||+|.++.+.+. +..+.
T Consensus 203 ~~~~~le~~i~~~~~--~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~--~~~~~-- 275 (459)
T 4a6r_A 203 VAARWLEEKILEIGA--DKV-AAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE--WFGHQ-- 275 (459)
T ss_dssp HHHHHHHHHHHHHCG--GGE-EEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSHHH--
T ss_pred HHHHHHHHHHHHcCC--CCE-EEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc--cchHh--
Confidence 7888888864211 134 4555555 555555 55889999999999999999999999999655543 22221
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHH---H-hhcccCCchHHHHHHHHHcCCCCCCh
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYK---V-ASVNLCSNISGQILASLVMSPPKVGD 405 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~---~-~~~~~~~~~~~q~~~~~~l~~~~~~~ 405 (434)
..+ ..+| ++ +|||+++ -.|+|+||+++ ++++++.+.. . ...+++.++++++++..+|+..+. +
T Consensus 276 --~~~-~~pd--i~---t~sK~l~-gg~~~lg~v~~---~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~ 342 (459)
T 4a6r_A 276 --HFG-FQPD--LF---TAAKGLS-SGYLPIGAVFV---GKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRD-E 342 (459)
T ss_dssp --HHT-CCCS--EE---EECGGGG-TTSSCCEEEEE---CHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH-T
T ss_pred --hcC-CCCC--ee---ehhhhhc-CCCCCccceee---CHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhc-c
Confidence 111 2355 22 6899994 23499999988 9999999872 2 234557889999998888863111 2
Q ss_pred HHHHHHH-HHHHHHHHHH
Q 013892 406 ESYESYC-AERDGILSSL 422 (434)
Q Consensus 406 ~~~~~~~-~~r~~l~~~L 422 (434)
+..++.+ ++.+.+++.|
T Consensus 343 ~~~~~~~~~~~~~~~~~l 360 (459)
T 4a6r_A 343 GIVQRVKDDIGPYMQKRW 360 (459)
T ss_dssp CHHHHHHHTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 4556666 6666666666
No 163
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.89 E-value=6e-24 Score=208.85 Aligned_cols=253 Identities=12% Similarity=0.060 Sum_probs=172.4
Q ss_pred ccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh-HHHHHHH
Q 013892 131 LDRSETQGLFSADSIERAWQILDQIPGRATGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA-SPAVHMM 206 (434)
Q Consensus 131 l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~-~~al~~~ 206 (434)
++++.++..+|+.+++++.+.+.+....+...|.. ..|..++.+.+.+++.+.+|.+ ++++|++|+|+ ++++..+
T Consensus 5 ~~~~~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~al~~~ 83 (360)
T 1w23_A 5 FNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQFTML 83 (360)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHH
T ss_pred EeecCCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHHHHHH
Confidence 34444444568999999888775421101222322 3445555666666666666753 46799999999 9999999
Q ss_pred HHHHhcCC---CCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH-HHHHHHhcCCCeeEEEEecCCCC
Q 013892 207 MQLLIRSE---NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKK-QLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 207 l~~l~~~~---gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
+..++ .+ ||.|+++.++|..+ ..++..| +++.++++++++ .+|+++|++ ++++ ++++|++++|+||
T Consensus 84 ~~~l~-~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~------~~k~v~~~~~~np 153 (360)
T 1w23_A 84 PMNLL-TKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNE------NDAYLHITSNNTI 153 (360)
T ss_dssp HHHHC-CTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCT------TEEEEEEESEETT
T ss_pred HHHhc-CCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCC------CCCEEEEeCCCCC
Confidence 99987 44 56677776666543 3467789 999999875333 378888888 7754 7999999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE
Q 013892 283 TGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY 362 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~ 362 (434)
||.+++ ++. +++|+++|+||+|..+... .++ ..+ + +++.|+||.| |++| +||
T Consensus 154 tG~~~~--~i~------~~~~~~li~D~a~~~~~~~-----~~~----~~~-----d---i~~~s~sK~~-~~~G--~G~ 205 (360)
T 1w23_A 154 YGTQYQ--NFP------EINHAPLIADMSSDILSRP-----LKV----NQF-----G---MIYAGAQKNL-GPSG--VTV 205 (360)
T ss_dssp TTEECS--SCC------CCCSSCEEEECTTTTTSSC-----CCG----GGC-----S---EEEEETTTTT-SCTT--CEE
T ss_pred cceecc--ccc------ccCCceEEEechhhcCCCC-----cCc----ccC-----C---EEEEEccccc-CCCC--cEE
Confidence 999987 232 2799999999999874321 111 111 3 7899999998 7666 899
Q ss_pred EEEecCCHHHHHHHHHHh-------------hcccCCchHHHHHHHHHcCCC--C-CChHHHHHHHHHHHHHHHHHHHH
Q 013892 363 MEVTGFSAEVREQIYKVA-------------SVNLCSNISGQILASLVMSPP--K-VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 363 ~~~~~~~~~~~~~l~~~~-------------~~~~~~~~~~q~~~~~~l~~~--~-~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+++ ++++++.+.... ....+++...+.++...++.. . .+++.+++++++++.+.+.|++.
T Consensus 206 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 281 (360)
T 1w23_A 206 VIV---KKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES 281 (360)
T ss_dssp EEE---EHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEE---cHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 987 778776654321 122355666666655555321 1 34567888888888888888765
No 164
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.9e-22 Score=207.45 Aligned_cols=260 Identities=12% Similarity=0.028 Sum_probs=187.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC-----C
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-----E 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~-----~ 214 (434)
.++.+.+.+.+.+..........|....|..++++.+++++.+.+|.+.+++++++|+|+++++..++.+++ + +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~-~~~~~~~ 154 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAK-MYALHHR 154 (497)
T ss_dssp CCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHH-HHHHHHS
T ss_pred CchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHH-HHHHhcC
Confidence 356778888787776432124456677788999999999999999977678899999999999999999886 3 4
Q ss_pred C---CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 215 N---DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 215 g---d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
| |+|+++.|+|..+...++..|++++.+++++ +++.+|+++|++++++ ++++|++++|+||||.+.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~--- 224 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADD--- 224 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCS---
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCC---
Confidence 5 8999999999999999999999999999876 3578999999999876 7999999999999999988
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccC--C---CCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYV--P---EKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~--~---~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
+++|.++|+++|+++|+|++|.++... + ......+.. ...++ .+++.|++|.+. .|.++||+++
T Consensus 225 l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~-------~~~g~-d~~~~s~~K~l~--~~~~~g~~~~- 293 (497)
T 3mc6_A 225 IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF-------RVPGV-TSISCDTHKYGF--APKGSSVIMY- 293 (497)
T ss_dssp CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST-------TSTTC-CEEEEETTTTTC--CCSSCEEEEC-
T ss_pred HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccc-------cCCCC-cEEEECchhhcC--CCCCceeEEe-
Confidence 889999999999999999999965432 1 000001100 11222 267889999753 6888999976
Q ss_pred cCCHHHHHHHHHHh-hccc-----CCc---------hHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 367 GFSAEVREQIYKVA-SVNL-----CSN---------ISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 367 ~~~~~~~~~l~~~~-~~~~-----~~~---------~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
..+.+....... ..+. .++ ..+++++...+.. ..+++..++..++++.+.+.|++
T Consensus 294 --~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~ 363 (497)
T 3mc6_A 294 --RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE-NGYIESCQEIVGAAMKFKKYIQE 363 (497)
T ss_dssp --SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333221111 1110 111 3445555555532 12345666777777777777776
No 165
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.88 E-value=6e-21 Score=193.35 Aligned_cols=210 Identities=15% Similarity=0.172 Sum_probs=159.4
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHcCCeEEEEe
Q 013892 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS----IALHGGTLVPYY 243 (434)
Q Consensus 168 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~----~~~~g~~~~~~~ 243 (434)
...++++.+++++ | .+ +.|++++|+ +++..++..++ ++||+|+++.|.|+.+... ++..|++++.++
T Consensus 115 ~~~~l~~~lA~l~----g--~~-~~v~~~sG~-~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 185 (445)
T 1qgn_A 115 TTVVLEEKISALE----G--AE-STLLMASGM-CASTVMLLALV-PAGGHIVTTTDCYRKTRIFIETILPKMGITATVID 185 (445)
T ss_dssp HHHHHHHHHHHHH----T--CS-EEEEESCHH-HHHHHHHHHHS-CSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred HHHHHHHHHHHHh----C--CC-cEEEeCCHH-HHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 3568888888876 3 22 556666665 99999999888 7999999999999987764 456799999987
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCe-eEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 244 LDEATGWGLETSEVKKQLEAAKAKGITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 244 ~~~~~~~~~d~~~l~~~l~~~~~~g~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
.+ |+++|++++++ ++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+.. +
T Consensus 186 ~~-------d~~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~--~ 247 (445)
T 1qgn_A 186 PA-------DVGALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK--A 247 (445)
T ss_dssp SS-------CHHHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC--T
T ss_pred CC-------CHHHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC--c
Confidence 53 79999999987 67 99999999999999998 8899999999999999999998653321 1
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
+ .++ .| ++++|+||.+ |..| .++||+++ ++++++.+..... ...+.+++..+++...++
T Consensus 248 ---~-----~~g---~D---iv~~S~sK~~-gg~gd~~~G~l~~---~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~- 308 (445)
T 1qgn_A 248 ---L-----ALG---AD---LVLHSATKFL-GGHNDVLAGCISG---PLKLVSEIRNLHHILGGALNPNAAYLIIRGMK- 308 (445)
T ss_dssp ---T-----TTT---CS---EEEECTTTTT-TCSSSCCCEEEEE---CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG-
T ss_pred ---c-----ccC---CE---EEEECCcccc-cccccceEEEEEE---CHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH-
Confidence 0 111 34 7899999998 4344 47999987 8899888876654 333456665555554443
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+....+++.++++.+.+.|+++
T Consensus 309 --~l~~r~~~~~~~a~~l~~~L~~~ 331 (445)
T 1qgn_A 309 --TLHLRVQQQNSTALRMAEILEAH 331 (445)
T ss_dssp --GHHHHHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcC
Confidence 33455667777778888887764
No 166
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.88 E-value=3.6e-22 Score=204.47 Aligned_cols=248 Identities=16% Similarity=0.144 Sum_probs=182.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCC---CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh---cCC
Q 013892 141 SADSIERAWQILDQIPGRATGAYSH---SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI---RSE 214 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~---~~~ 214 (434)
.+.+++++.+.+ . ..+.|.+ .+|..++++++++++.+.+|.+. .+++|+|+++++..++.++. .++
T Consensus 79 ~p~v~~~~~~~~---~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~ 150 (474)
T 1wyu_B 79 NPKLHEEAARLF---A--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDR 150 (474)
T ss_dssp CCHHHHHHHHTT---S--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHH---H--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhc
Confidence 344666655431 1 2445554 67889999999999999888542 46788999999987555442 147
Q ss_pred CC-----EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 215 ND-----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 215 gd-----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
|| +|+++.|+|+.+...++..|++++.+++++ ++.+|+++|++++++ ++++|++++| ||||.+.
T Consensus 151 Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~-- 219 (474)
T 1wyu_B 151 GEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGP------HVAALMLTNP-NTLGLFE-- 219 (474)
T ss_dssp TCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCC--
T ss_pred CCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCC------CceEEEEECC-CCCcccC--
Confidence 77 999999999999999999999999999864 468999999999976 7999999998 6899883
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC-C---ceeEEEEE
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC-G---KRGGYMEV 365 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~-G---~R~G~~~~ 365 (434)
+++++|+++|+++|+++|+||+|..+.++. .+.. .++ .+ +++.|++|+| +.+ | .|+||+++
T Consensus 220 ~~l~~i~~l~~~~g~~li~Dea~~~~~~g~----~~~~----~~g---~d---i~~~s~~K~~-~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 220 RRILEISRLCKEAGVQLYYDGANLNAIMGW----ARPG----DMG---FD---VVHLNLHKTF-TVPHGGGGPGSGPVGV 284 (474)
T ss_dssp TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT----CCHH----HHT---CS---EEECCTTTTT-CCCCTTSCCCCCCEEE
T ss_pred CCHHHHHHHHHHcCCEEEEeCchhhhhccC----CCcc----cCC---Cc---EEEEeCcccc-ccCCCCCCCCeEEEEE
Confidence 359999999999999999999998765431 1221 122 34 7788999999 555 4 59999987
Q ss_pred ecCCHHHHHHHHH-Hh------------------h-cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQIYK-VA------------------S-VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLA 423 (434)
Q Consensus 366 ~~~~~~~~~~l~~-~~------------------~-~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~ 423 (434)
++++++.+.. +. . ...+.+.+++.++...+.. .+.+++..+++.++++.+.+.|+
T Consensus 285 ---~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~ 361 (474)
T 1wyu_B 285 ---KAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLK 361 (474)
T ss_dssp ---CGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777665541 00 0 1124566777777666642 23345667788888888888887
Q ss_pred HH
Q 013892 424 RR 425 (434)
Q Consensus 424 ~~ 425 (434)
+.
T Consensus 362 ~~ 363 (474)
T 1wyu_B 362 EK 363 (474)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 167
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=1.3e-21 Score=195.37 Aligned_cols=237 Identities=13% Similarity=0.144 Sum_probs=172.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcc--hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCE
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQG--IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDG 217 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G--~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~ 217 (434)
++++++++.+.+.. .|.+..| ..++++++++++ | .+++++|+|+++++..++..+ + ++||+
T Consensus 11 ~~~v~~a~~~~~~~-------~~~~~~g~~~~~l~~~la~~~----~----~~~v~~~~ggt~al~~~~~~l~~-~~gd~ 74 (394)
T 1o69_A 11 GGNELKYIEEVFKS-------NYIAPLGEFVNRFEQSVKDYS----K----SENALALNSATAALHLALRVAGV-KQDDI 74 (394)
T ss_dssp -CCHHHHHHHHHHH-------TTTSCTTHHHHHHHHHHHHHH----C----CSEEEEESCHHHHHHHHHHHTTC-CTTCE
T ss_pred CHHHHHHHHHHHHc-------CCccCCChHHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHcCC-CCCCE
Confidence 45688888887764 2555567 899999999998 2 268999999999999999998 7 79999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|+++.|+|+.+...++..|++++.++++ .+|.+|+++|++++++. +.++++|++++ |||...+ +++|.+
T Consensus 75 Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~~~---l~~i~~ 143 (394)
T 1o69_A 75 VLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNAAK---MDEIVE 143 (394)
T ss_dssp EEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCCCC---HHHHHH
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCChhh---HHHHHH
Confidence 9999999999999999999999999987 35789999999999752 11478899886 8997766 899999
Q ss_pred HHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 298 FCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 298 ~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
+|+++|+++|+||+|. ++.+.+. +..+ ..+ +.+.||||.. +++|.|+||+++ .++++++.+
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~~-~~~~-----------~~~---~~~~s~s~~K-~l~~~~~G~~~~--~~~~l~~~l 205 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKNK-ALGT-----------FGE---FGVYSYNGNK-IITTSGGGMLIG--KNKEKIEKA 205 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTE-ETTS-----------SSS---EEEEECCTTS-SSCCSSCEEEEE--SCHHHHHHH
T ss_pred HHHHcCCEEEEECcCcccceeCCc-cccc-----------ccC---cEEEEEeCCc-cCCCCCceEEEE--CCHHHHHHH
Confidence 9999999999999999 5555432 1101 112 4455664333 345789999976 248888888
Q ss_pred HHHhhcc-cC--------------CchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 377 YKVASVN-LC--------------SNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 377 ~~~~~~~-~~--------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
....... .+ .+.+...++...+ +++++..++.+++++.+.+.|++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l---~~l~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 206 RFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM---EVLEQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp HHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhccccCccccccccCcccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccc
Confidence 7764321 11 1223333322223 234566777777777777777653
No 168
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.88 E-value=2.8e-22 Score=203.96 Aligned_cols=275 Identities=14% Similarity=0.073 Sum_probs=186.6
Q ss_pred CCCccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....|||..+ +. .-++.+++++.+++... ..|....+..+.+.++++++.+..+. ...++|++|+|+++
T Consensus 60 g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGse 133 (451)
T 3oks_A 60 GNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF-----THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSE 133 (451)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC-----SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHH
T ss_pred CCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc-----ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHH
Confidence 3457888776 22 24899999999988753 23555555667778888888776542 23578999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCC--------------eEEEEecCCC--CCC-CC--------CHH
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIALHGG--------------TLVPYYLDEA--TGW-GL--------ETS 255 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~--~~~-~~--------d~~ 255 (434)
++..+++.+.. ..+++|++.+++|+.+...+...+. .+..++.... ..+ +. +++
T Consensus 134 A~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 213 (451)
T 3oks_A 134 AVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAK 213 (451)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHH
Confidence 99999987752 2458999999999987766554432 3444443310 000 11 245
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhh
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSM 333 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l 333 (434)
.+++.+++.. +.+..++++++|.|++|. ..+++.+++|.++|++||+++|+||+|.++.+.+. +..+. ..
T Consensus 214 ~~~~~l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~----~~ 285 (451)
T 3oks_A 214 RAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA--MFACE----HE 285 (451)
T ss_dssp HHHHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGG----GG
T ss_pred HHHHHHHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc--chhhh----hc
Confidence 5555555321 113456777788776663 44677799999999999999999999998755543 22211 11
Q ss_pred CCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCCChHHHHHHH
Q 013892 334 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKVGDESYESYC 412 (434)
Q Consensus 334 ~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 412 (434)
+ ..+| ++ ||||++ | .|+|+||+++ ++++++.+..... .+++.++++|+++..+++..+. ++.+++++
T Consensus 286 ~-~~pd--i~---t~sK~l-~-~G~~iG~v~~---~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~ 353 (451)
T 3oks_A 286 G-IDPD--LI---VTAKGI-A-GGLPLSAVTG---RAEIMDSPHVSGLGGTYGGNPIACAAALATIETIES-EGLVARAQ 353 (451)
T ss_dssp T-CCCS--EE---EECGGG-G-TTSSCEEEEE---EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred C-CCCC--ee---eehhhh-h-CCcceEEEEE---CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHH
Confidence 1 2245 22 889999 5 3999999987 8898888765433 5668899999988888753211 25677788
Q ss_pred HHHHHHHHHHHHHHH
Q 013892 413 AERDGILSSLARRAK 427 (434)
Q Consensus 413 ~~r~~l~~~L~~~~~ 427 (434)
++++.+++.|++...
T Consensus 354 ~~~~~l~~~L~~~~~ 368 (451)
T 3oks_A 354 QIEKIMKDRLGRLQA 368 (451)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888887643
No 169
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.88 E-value=4.2e-22 Score=200.87 Aligned_cols=259 Identities=12% Similarity=0.070 Sum_probs=176.6
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
..||+..+ +.+ .|+.+++++.+.+.... ...| ..+++.++++++.+.++ ++++|++|+|+++++
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~ 121 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT---SFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTEAC 121 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS---CCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHHHH
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC---CcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence 35565554 122 48999999999887632 2223 23566667777666655 578999999999999
Q ss_pred HHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc-CC-------------------eEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 204 HMMMQLLIR-SENDGILCPIPQYPLYSASIALH-GG-------------------TLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 204 ~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~-g~-------------------~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
..+++.... ..+++|++.+|+|+.+...+... |. .++.++.+ |+++|+++++
T Consensus 122 ~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~ 194 (427)
T 3fq8_A 122 MAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFA 194 (427)
T ss_dssp HHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHH
Confidence 999954321 24589999999997644322211 11 13333321 8999999987
Q ss_pred HHHhcCCCeeEEEEecCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCce
Q 013892 263 AAKAKGITVRALVVINPGNPTGQVLA-EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDIS 341 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 341 (434)
+. +.++++|+++.++|++|.+.+ ++.+++|.++|++||+++|+||+|.++ +.+. ... ....+ ..+|
T Consensus 195 ~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~--~~~----~~~~~-~~~d-- 261 (427)
T 3fq8_A 195 EN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY--GGV----QEKFG-VTPD-- 261 (427)
T ss_dssp HS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT--THH----HHHTT-CCCS--
T ss_pred hC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc--chh----hHhcC-CCCC--
Confidence 62 114666666666777887766 556999999999999999999999986 4332 111 11111 2244
Q ss_pred EEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 342 LVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
+.||||+| | +|+|+||+++ ++++++.+... ...+.+.+++++.++...++..+. ++.+++++++++.
T Consensus 262 ---i~t~sK~~-~-~G~~~G~~~~---~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~ 332 (427)
T 3fq8_A 262 ---LTTLGKII-G-GGLPVGAYGG---KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGTYEYLDQITKR 332 (427)
T ss_dssp ---EEEECGGG-G-TTSSCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHH
T ss_pred ---hhhhhhhh-h-CCcceEEEEE---cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Confidence 35889999 5 7999999987 99998888653 223446788888888877753221 4677888888888
Q ss_pred HHHHHHHHHH
Q 013892 418 ILSSLARRAK 427 (434)
Q Consensus 418 l~~~L~~~~~ 427 (434)
+.+.|++...
T Consensus 333 ~~~~l~~~~~ 342 (427)
T 3fq8_A 333 LSDGLLAIAQ 342 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 170
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.88 E-value=6.2e-22 Score=200.36 Aligned_cols=258 Identities=12% Similarity=0.101 Sum_probs=169.7
Q ss_pred CCccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ +.+ .++.+++++.+.+..... ....| +.....++++.+++++ | .++|++|+|++++
T Consensus 65 ~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~-~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sGseA 134 (433)
T 1z7d_A 65 KRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI-CSRAF-FSVPLGICERYLTNLL----G----YDKVLMMNTGAEA 134 (433)
T ss_dssp CEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC-CCTTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSHHHH
T ss_pred CEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC-ccCCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCHHHH
Confidence 446787764 344 789999999998876421 11123 2222445555555554 4 5789999999999
Q ss_pred HHHHHHHHhc--------CCC-CEEEEcCCCChhHHH-HHHHcC------------CeEEEEecCCCCCCCCCHHHHHHH
Q 013892 203 VHMMMQLLIR--------SEN-DGILCPIPQYPLYSA-SIALHG------------GTLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 203 l~~~l~~l~~--------~~g-d~Vlv~~p~y~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
+..+++.+.. .+| ++|++++|+|..+.. .+...| ..++.++. .|+++|+++
T Consensus 135 ~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~ 207 (433)
T 1z7d_A 135 NETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEE 207 (433)
T ss_dssp HHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHH
Confidence 9999987531 367 999999999987654 333333 23444432 289999998
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
++. .++++|+++..+|+||.+ ++.+++++|.++|+++|+++|+||+|.++.+.+. ...+ ...+ ..+|
T Consensus 208 l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~--~~~~----~~~~-~~~d 275 (433)
T 1z7d_A 208 LKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK--LLCV----HHYN-VKPD 275 (433)
T ss_dssp HTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGG----GGGT-CCCS
T ss_pred hCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc--chhh----HhcC-CCCC
Confidence 842 167766555446779975 6888999999999999999999999988544432 2211 1111 2255
Q ss_pred ceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH-hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV-ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
++ ||||.+ | +| +|+||+++ ++++++.+... ...+.+.+++++.++...++..+. ++..++.++.++.
T Consensus 276 --i~---t~sK~l-~-~G~~~~G~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~ 344 (433)
T 1z7d_A 276 --VI---LLGKAL-S-GGHYPISAVLA---NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN-EKLCENAEKLGGP 344 (433)
T ss_dssp --EE---EECGGG-G-TTSSCCEEEEE---CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHH
T ss_pred --EE---EECccc-c-CCCCCeEEEEE---CHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 22 899999 5 79 99999987 88888776543 224457788888887777653211 2567788888888
Q ss_pred HHHHHHHH
Q 013892 418 ILSSLARR 425 (434)
Q Consensus 418 l~~~L~~~ 425 (434)
+.+.|++.
T Consensus 345 l~~~L~~l 352 (433)
T 1z7d_A 345 FLENLKRE 352 (433)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888765
No 171
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.88 E-value=5.9e-22 Score=199.27 Aligned_cols=201 Identities=14% Similarity=0.200 Sum_probs=156.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCE
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDG 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~ 217 (434)
.+|+++++++.+.+.... ...|++..|..++++++++.+.+.+|.+ ++++++++++++..++..+ + ++||+
T Consensus 13 ~~~~~~~~a~~~~~~~~~---~~~~~~~~g~~~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~-~~gd~ 84 (418)
T 2c81_A 13 QHSDRTRRKIEEVFQSNR---WAISGYWTGEESMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGI-GEGDE 84 (418)
T ss_dssp CCCHHHHHHHHHHHHHTC---CSTTSBCCSSCCHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTC-CTTCE
T ss_pred CCCHHHHHHHHHHHhcCC---ccccCcccCCHHHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCC-CCcCE
Confidence 357899999999887642 3348877885555555555555555632 4666777789999999998 6 79999
Q ss_pred EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 218 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 218 Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
|+++.|+|..+...++..|++++.+++++ ++|.+|+++|++++++ ++++|+++ ||||...+ +++|.+
T Consensus 85 Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~ 151 (418)
T 2c81_A 85 VIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITD------KTKAIIPV---HLFGSMAN---MDEINE 151 (418)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCT------TEEEECCB---CCTTCCCC---HHHHHH
T ss_pred EEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCC------CCeEEEEe---CCcCCccc---HHHHHH
Confidence 99999999999999999999999999875 3579999999998875 78888865 58998866 899999
Q ss_pred HHHHcCCEEEEccCCCCCc-cCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 298 FCKKEGLVLLADEVYQENV-YVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 298 ~~~~~~~~li~Deay~~~~-~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
+|+++|++||+||+|..+. +++. +. .. ..+ +.+.|| ||.| |. | |+||+++ .++++++
T Consensus 152 ~~~~~~~~li~D~a~~~~~~~~~~-~~-------~~----~~~---~~~~s~s~~K~~-~~-g-~~g~~~~--~~~~l~~ 211 (418)
T 2c81_A 152 IAQEHNLFVIEDCAQSHGSVWNNQ-RA-------GT----IGD---IGAFSCQQGKVL-TA-G-EGGIIVT--KNPRLFE 211 (418)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTE-ET-------TS----SSS---EEEEECCTTSSS-CS-S-SCEEEEE--SCHHHHH
T ss_pred HHHHCCCEEEEECcccccCccCCE-ec-------cc----ccc---eEEEeccCCccc-CC-C-CeEEEEE--CCHHHHH
Confidence 9999999999999999875 4432 11 11 123 677788 9999 65 8 9999976 3578888
Q ss_pred HHHHHh
Q 013892 375 QIYKVA 380 (434)
Q Consensus 375 ~l~~~~ 380 (434)
.+....
T Consensus 212 ~~~~~~ 217 (418)
T 2c81_A 212 LIQQLR 217 (418)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 172
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.88 E-value=5.5e-22 Score=198.21 Aligned_cols=211 Identities=14% Similarity=0.101 Sum_probs=158.5
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCeEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVP 241 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~ 241 (434)
..+..++|+.+|+++ | .+ ++++++++++++..++. ++ ++||+|+++.|.|+.... .++..|++++.
T Consensus 54 ~~~~~~lr~~la~~~----g--~~--~~i~~~sGt~a~~~al~-~~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~ 123 (393)
T 1n8p_A 54 NPNRENLERAVAALE----N--AQ--YGLAFSSGSATTATILQ-SL-PQGSHAVSIGDVYGGTHRYFTKVANAHGVETSF 123 (393)
T ss_dssp CHHHHHHHHHHHHHT----T--CS--EEEEESCHHHHHHHHHH-TS-CSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred ChhHHHHHHHHHHHh----C--CC--cEEEECChHHHHHHHHH-Hc-CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence 345789999999987 3 12 45555555899999999 77 799999999999985544 34567999998
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEccCCCCCcc
Q 013892 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE----GLVLLADEVYQENVY 317 (434)
Q Consensus 242 ~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~----~~~li~Deay~~~~~ 317 (434)
++++ | ++|++++++ ++++|++++|+||||.+++ +++|.++|+++ |+++|+||+|..+.+
T Consensus 124 v~~~-------d-~~l~~~i~~------~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIKE------NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp ESSH-------H-HHHHHHSCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred eCCC-------h-HHHHHhccc------CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 8764 6 788887765 7999999999999999998 89999999999 999999999998765
Q ss_pred CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee-EEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHH
Q 013892 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG-GYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILAS 395 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~-G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~ 395 (434)
.. .. .++ .+ +++.|+||.+ |.+|+|+ ||+++ .++++++.+..... .....++..+.++.
T Consensus 187 ~~---~~-------~~~---~d---i~~~S~sK~~-g~~G~rigG~~~~--~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 247 (393)
T 1n8p_A 187 SN---PL-------NFG---AD---IVVHSATKYI-NGHSDVVLGVLAT--NNKPLYERLQFLQNAIGAIPSPFDAWLTH 247 (393)
T ss_dssp CC---GG-------GGT---CS---EEEEETTTTT-TCSSCCCCEEEEE--SCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CC---HH-------HcC---Ce---EEEEECcccc-cCCCCceeEEEEe--CCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 31 11 111 23 8899999999 7789999 99875 24788888877654 34455666666555
Q ss_pred HHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 396 LVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 396 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
..++. +...++...++++.+.+.|+++
T Consensus 248 ~~l~~---~~~~~~~~~~~~~~l~~~L~~~ 274 (393)
T 1n8p_A 248 RGLKT---LHLRVRQAALSANKIAEFLAAD 274 (393)
T ss_dssp HHHTT---HHHHHHHHHHHHHHHHHHHTSC
T ss_pred hccch---HHHHHHHHHHHHHHHHHHHHhC
Confidence 55542 3455666667777777766554
No 173
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.88 E-value=1.1e-22 Score=199.78 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=163.7
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE-
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG- 217 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~- 217 (434)
++++.+++++.+.+ ....|.+..+..++++.+++++ | . +..++++|+++++..+++.++ .+||.
T Consensus 26 g~~p~v~~ai~~~~------~~~~~~~~~~~~~l~~~la~~~----~--~--~~~i~~~~g~~a~~~a~~~~~-~~g~~~ 90 (359)
T 3pj0_A 26 GVLTEALQNIDDNL------ESDIYGNGAVIEDFETKIAKIL----G--K--QSAVFFPSGTMAQQIALRIWA-DRKENR 90 (359)
T ss_dssp HHHHHHTTTSCTTC------BCCBTTBSHHHHHHHHHHHHHH----T--C--SEEEEESCHHHHHHHHHHHHH-HHHTCC
T ss_pred CCCHHHHHHHHhhc------ccCcccCCHHHHHHHHHHHHHh----C--C--CcEEEeCCHHHHHHHHHHHHH-hcCCCc
Confidence 44666666655421 2456777788999999999987 2 1 223555777899999999988 57776
Q ss_pred -EEEcCCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCCCHHHH
Q 013892 218 -ILCPIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVLAEENQ 292 (434)
Q Consensus 218 -Vlv~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~~~~~l 292 (434)
|+++.++|..+. ......|++++.++.+ ++.+|+++|+++ .+ ++++|++++|+||| |.+++.+++
T Consensus 91 vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l 160 (359)
T 3pj0_A 91 RVAYHPLSHLEIHEQDGLKELQQITPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEEL 160 (359)
T ss_dssp EEEECTTCHHHHSSTTHHHHHHCCEEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHH
T ss_pred EEEEeccceeeehhcchHHHhcCceEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHH
Confidence 555556554432 1235679999998763 468999999887 33 79999999999998 799999999
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH
Q 013892 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 293 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
++|+++|++||++||+|++|..+..... ..+...+.. ..+ +++.|+||+|+ .++ +||++. ++++
T Consensus 161 ~~l~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-----~~d---~~~~s~sK~~~-~~~--gg~~~~---~~~l 224 (359)
T 3pj0_A 161 EKISEYCHEQGISLHLDGARLWEITPFY--QKSAEEICA-----LFD---SVYVSFYKGIG-GIA--GAILAG---NDDF 224 (359)
T ss_dssp HHHHHHHHHHTCEEEEEETTCGGGHHHH--TCCHHHHHT-----TCS---EEEEESSSTTC-CSS--CEEEEE---CHHH
T ss_pred HHHHHHHHHcCCEEEEECcchhcchhhh--CCCHHHhhc-----cCC---EEEEeccccCC-Ccc--eEEEEC---CHHH
Confidence 9999999999999999999875432111 112222211 123 44569999984 332 388876 9999
Q ss_pred HHHHHHHhh-c--ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVAS-V--NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 373 ~~~l~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+.+... . ........+.++...+++. .+..+++.++++.+.+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 225 VQEAKIWKRRYGGDLISLYPYILSADYYFEKR---IGKMAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp HHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHH---GGGHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCcchhHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHhhC
Confidence 999987543 2 1222223333333334321 244556788888888888764
No 174
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.88 E-value=9.3e-22 Score=194.61 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=154.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCCEE
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSENDGI 218 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd~V 218 (434)
+++++++++.+.+... .|.+..+..++++.+++++. .+++++++|+++++..++..+ + ++||+|
T Consensus 15 ~~~~~~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~-~~gd~V 79 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRN------WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDI-GFGDEV 79 (373)
T ss_dssp HHHHHHHHHHHHHHHT------CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTC-CTTCEE
T ss_pred CCHHHHHHHHHHHHCC------CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCC-CCcCEE
Confidence 4677888887777652 36777889999999999982 247999999999999999998 6 799999
Q ss_pred EEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 219 LCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 219 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
+++.|+|..+...++..|++++.++++++ +|.+|+++|++++++ ++++|+ |+||||...+ +++|.++
T Consensus 80 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l 146 (373)
T 3frk_A 80 IVPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITE------KTKAII---AVHLYGQPAD---MDEIKRI 146 (373)
T ss_dssp EEETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCT------TEEEEE---EECCTTCCCC---HHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCC------CCeEEE---EECCCcCccc---HHHHHHH
Confidence 99999999999999999999999998754 578999999998876 788887 6789999887 8899999
Q ss_pred HHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHHHHH
Q 013892 299 CKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 299 ~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
|+++|+++|+|++|..+..-+..+ ++ ...| +++.||+ |.+ |.+| ++|+++. .++++++.+
T Consensus 147 ~~~~~~~li~D~a~~~g~~~~~~~----------~~-~~~d---~~~~S~~~~K~l-~~~g-~gg~~~~--~~~~~~~~~ 208 (373)
T 3frk_A 147 AKKYNLKLIEDAAQAHGSLYKGMK----------VG-SLGD---AAGFSFYPAKNL-GSLG-DGGAVVT--NDKDLAEKI 208 (373)
T ss_dssp HHHHTCEEEEECTTCTTCEETTEE----------TT-SSSS---EEEEECCTTSSS-CCSS-SCEEEEE--SCHHHHHHH
T ss_pred HHHcCCEEEEECCcccCCEECCEe----------cc-cccc---EEEEeCcCCCcc-Cccc-eeEEEEe--CCHHHHHHH
Confidence 999999999999998643321111 11 1123 6788987 988 4224 4888865 367788887
Q ss_pred HHHhh
Q 013892 377 YKVAS 381 (434)
Q Consensus 377 ~~~~~ 381 (434)
.....
T Consensus 209 ~~~~~ 213 (373)
T 3frk_A 209 KALSN 213 (373)
T ss_dssp HHHHB
T ss_pred HHHHh
Confidence 76543
No 175
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.88 E-value=5.3e-22 Score=201.55 Aligned_cols=255 Identities=16% Similarity=0.160 Sum_probs=170.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCC-cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-------
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHS-QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR------- 212 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~------- 212 (434)
|+.+++++.+.+.... |... .+..++++++++.+.+.++ .++++|++|+|+++++..+++.+..
T Consensus 68 ~~~v~~a~~~~~~~~~------~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~ 139 (449)
T 3a8u_X 68 RKEIQEAVAKQLSTLD------YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQ 139 (449)
T ss_dssp CHHHHHHHHHHTTTCS------CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCC------CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCC
Confidence 7889999988876531 1111 2334456666666665544 4678999999999999999988751
Q ss_pred CCCCEEEEcCCCChhHHH-HHHHcCC------------eEEEEecCC--CCCC-CCC--------HHHHHHHHHHHHhcC
Q 013892 213 SENDGILCPIPQYPLYSA-SIALHGG------------TLVPYYLDE--ATGW-GLE--------TSEVKKQLEAAKAKG 268 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~~~-~~~~~g~------------~~~~~~~~~--~~~~-~~d--------~~~l~~~l~~~~~~g 268 (434)
.++|+|++.+|+|+.+.. .+...|. .+..++... ..+| ++| +++|++++++...
T Consensus 140 ~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~-- 217 (449)
T 3a8u_X 140 ATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDA-- 217 (449)
T ss_dssp TTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCG--
T ss_pred CCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCC--
Confidence 167999999999987643 4444431 233343321 1111 256 9999999875210
Q ss_pred CCeeEEEEecC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEe
Q 013892 269 ITVRALVVINP-GNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQ 346 (434)
Q Consensus 269 ~~~~~i~l~~p-~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~ 346 (434)
.++++| +++| +|+||. +.+++++++|.++|++||+++|+||+|.++.+.+. ...+ . .++ ..+| ++
T Consensus 218 ~~~~~v-i~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~-~---~~~-~~~d--i~--- 284 (449)
T 3a8u_X 218 SNIAAV-FVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS--MFGA-D---SFG-VTPD--LM--- 284 (449)
T ss_dssp GGEEEE-EECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSHH-H---HHT-CCCS--EE---
T ss_pred CCEEEE-EEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc--chhh-h---hcC-CCCC--EE---
Confidence 145554 4556 578997 56799999999999999999999999988644332 2121 1 111 2245 23
Q ss_pred cCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH----------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 347 SVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV----------ASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 347 S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
||||.| + .| +|+||+++ ++++++.+... ...+.+.+++++.++..+++..+. ++..+++++.+
T Consensus 285 s~sK~l-~-~G~~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~ 358 (449)
T 3a8u_X 285 CIAKQV-T-NGAIPMGAVIA---STEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-ENLVQSVAEVA 358 (449)
T ss_dssp EECGGG-G-TTSSCCEEEEE---EHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHH
T ss_pred EEcccc-c-CCCCceEEEEE---CHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 889999 4 48 99999987 78999888763 123446788888887777753111 24667777788
Q ss_pred HHHHHHHHH
Q 013892 416 DGILSSLAR 424 (434)
Q Consensus 416 ~~l~~~L~~ 424 (434)
+.+.+.|++
T Consensus 359 ~~l~~~L~~ 367 (449)
T 3a8u_X 359 PHFEKALHG 367 (449)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 888887765
No 176
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.88 E-value=2.9e-21 Score=190.60 Aligned_cols=236 Identities=14% Similarity=0.148 Sum_probs=176.4
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---hcCCC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL---IRSEN 215 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l---~~~~g 215 (434)
.+|+.+++++.+.+... .|.+..+..++++++++++ | . +++++|+|+++++..++.++ + ++|
T Consensus 10 ~~~~~v~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~----~--~--~~v~~~~ggt~al~~~~~~~~~~~-~~g 74 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK------QLTQGKRSLLFEEALCEFL----G--V--KHALVFNSATSALLTLYRNFSEFS-ADR 74 (375)
T ss_dssp CCCHHHHHHHHHHHTSS------CCSSSHHHHHHHHHHHHHH----T--C--SEEEEESCHHHHHHHHHHHSSCCC-TTS
T ss_pred CCCHHHHHHHHHHHHcC------cccCChHHHHHHHHHHHHh----C--C--CeEEEeCCHHHHHHHHHHHhcccC-CCC
Confidence 46889999998888642 1334567889999999998 3 2 28999999999999999998 6 799
Q ss_pred CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 216 DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 216 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
|+|+++.|+|+.+...++..|++++.++++++. .+|+++|++++++ ++++|++++| ||.+.+ +++|
T Consensus 75 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i 140 (375)
T 2fnu_A 75 NEIITTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINE------RTKAIVSVDY---AGKSVE---VESV 140 (375)
T ss_dssp CEEEECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCT------TEEEEEEECG---GGCCCC---HHHH
T ss_pred CEEEECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCc------CceEEEEeCC---cCCccC---HHHH
Confidence 999999999999999999999999999987652 7899999988865 7899888877 999988 8899
Q ss_pred HHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCC--CCCCCCCCceeEEEEEecCCHHHH
Q 013892 296 VDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVS--KGYYGECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 296 ~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~S--K~~~g~~G~R~G~~~~~~~~~~~~ 373 (434)
.++|+++|+++|+||+|..+..... ..++ ..++ +.+.||| |.+ |. | +||+++.. +++++
T Consensus 141 ~~l~~~~~~~li~D~a~~~~~~~~~----------~~~~-~~~~---i~~~s~s~~K~~-~~-g--~g~~~~~~-~~~~~ 201 (375)
T 2fnu_A 141 QKLCKKHSLSFLSDSSHALGSEYQN----------KKVG-GFAL---ASVFSFHAIKPI-TT-A--EGGAVVTN-DSELH 201 (375)
T ss_dssp HHHHHHHTCEEEEECTTCTTCEETT----------EETT-SSSS---EEEEECCTTSSS-CC-S--SCEEEEES-CHHHH
T ss_pred HHHHHHcCCEEEEECccccCCeECC----------eecc-ccCC---eEEEeCCCCCCc-cc-c--CceEEEeC-CHHHH
Confidence 9999999999999999986543211 0111 1123 7788999 998 64 6 67776522 57888
Q ss_pred HHHHHHhhcc-----------------cCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 374 EQIYKVASVN-----------------LCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 374 ~~l~~~~~~~-----------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+....... ...+.+...++...+ +.+++..++++++++.+.+.|++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~ 267 (375)
T 2fnu_A 202 EKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQL---KKAPFLMQKREEAALTYDRIFKDN 267 (375)
T ss_dssp HHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8887654211 123333333333222 334567777778888888777653
No 177
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.88 E-value=7.9e-22 Score=198.45 Aligned_cols=222 Identities=15% Similarity=0.131 Sum_probs=163.7
Q ss_pred CCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHH------
Q 013892 162 AYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSAS------ 231 (434)
Q Consensus 162 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~------ 231 (434)
.|+. .|..+|++.+|+++ | .+..++ ++|+++++..++.+++ ++||+|+++. |.|..+...
T Consensus 69 ~y~~-~~~~~Le~~lA~l~----g----~e~alv~p~~~sGt~Ai~~al~all-~pGD~Vl~~~~~~y~~~~~~~g~~~~ 138 (427)
T 3i16_A 69 GYGD-IGRDSLDAVYARVF----N----TESALVRPHFVNGTHALGAALFGNL-RPGNTMLSVCGEPYDTLHDVIGITEN 138 (427)
T ss_dssp CTTC-HHHHHHHHHHHHHH----T----CSEEEEETTCCSHHHHHHHHHHHHC-CTTCEEEESSSSCCGGGHHHHTCSCC
T ss_pred CCCH-HHHHHHHHHHHHHh----C----CcceEEeCCCccHHHHHHHHHHHHh-CCCCEEEEeCCCccHHHHHHHhcccc
Confidence 3443 35788888888887 3 233355 7888999999999998 7999999999 999987743
Q ss_pred -----HHHcCCeEEEEecCCCCCCCCCHHHHHHHHH--HHHhcCCCeeEEEEec----CCCCCccCCCHHHHHHHHHHHH
Q 013892 232 -----IALHGGTLVPYYLDEATGWGLETSEVKKQLE--AAKAKGITVRALVVIN----PGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 232 -----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~g~~~~~i~l~~----p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
++..|++++.++++++ +.+|+++|+++++ + ++++|++++ |+||||.+ .++++|+++|+
T Consensus 139 ~~~~~l~~~G~~~~~v~~~~~--g~~D~e~l~~~l~~~~------~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~ 207 (427)
T 3i16_A 139 SNMGSLKEFGINYKQVDLKED--GKPNLEEIEKVLKEDE------SITLVHIQRSTGYGWRRALLI---EDIKSIVDCVK 207 (427)
T ss_dssp CSSCCTGGGTCEEEECCCCTT--SSCCHHHHHHHHHTCT------TEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHH
T ss_pred chHHHHHHcCCEEEEecCccC--CCcCHHHHHHHhhCCC------CCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHH
Confidence 4567999999998654 4789999999998 5 799999998 99999876 56999999999
Q ss_pred H--cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHH
Q 013892 301 K--EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIY 377 (434)
Q Consensus 301 ~--~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~ 377 (434)
+ +|+++|+|++|..+++... + . .++ .| |+++|+||.+ |.+| .++||+++ ++++++++.
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~-p-~-------~~g---aD---iv~~S~sK~l-gg~g~~~gG~i~~---~~~li~~l~ 268 (427)
T 3i16_A 208 NIRKDIICFVDNCYGEFMDTKE-P-T-------DVG---AD---LIAGSLIKNI-GGGIAPTGGYLAG---TKDCIEKTS 268 (427)
T ss_dssp HHCTTSEEEEECTTTTTSSSSC-G-G-------GGT---CS---EEEEETTSGG-GTTTCCSCEEEEE---CHHHHHHHH
T ss_pred HhCCCCEEEEECCCccccccCC-c-c-------ccC---Ce---EEEecCcccC-CCCCCceEEEEEE---CHHHHHHHH
Confidence 9 9999999999998764432 1 1 111 23 8899999999 5345 78899987 899999998
Q ss_pred HHhh---ccc-CCchHH-HHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 378 KVAS---VNL-CSNISG-QILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 378 ~~~~---~~~-~~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.... ... ..+.+. ..++...+ +.....+++..+++..+.+.|+++.
T Consensus 269 ~~~~~~~~g~~~~~~~~~a~~~l~gl---~~~~~r~~~~~~~a~~la~~L~~~g 319 (427)
T 3i16_A 269 YRLTVPGIGGECGSTFGVVRSMYQGL---FLAPHISMEALKGAILCSRIMELAG 319 (427)
T ss_dssp HHHSCTTTGGGCCCCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhcccCccCccCCccHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7432 111 111122 22222222 1224667788888888888888764
No 178
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=5e-22 Score=200.60 Aligned_cols=224 Identities=14% Similarity=0.083 Sum_probs=163.6
Q ss_pred HHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHH----------HHcCCeEE
Q 013892 172 LRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASI----------ALHGGTLV 240 (434)
Q Consensus 172 lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~~----------~~~g~~~~ 240 (434)
.++++++++.+.+|......+++++ ++++++..++.+++ ++||+|+++. |.|..+...+ +..|++++
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~-~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGIL-RPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTC-CTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhC-CCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 3555666666556644333344455 56899999999888 7999999999 9999988665 34799999
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe-cCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEccCCCCCcc
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVI-NPGNPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVY 317 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~ 317 (434)
.++++++ +.+|+++|++++++ ++++|+++ +||||+|.+.+.+++++|+++|++ +|+++|+||+|..+.+
T Consensus 144 ~v~~~~~--~~~d~e~l~~~l~~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~ 215 (431)
T 3ht4_A 144 AVPLTEG--GLVDFEAVAAAIHS------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIE 215 (431)
T ss_dssp ECCBCTT--SSBCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSS
T ss_pred EeCCCCC--CCcCHHHHHhhcCC------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhcc
Confidence 9998754 68999999999976 79999999 599999999999999999999999 9999999999999776
Q ss_pred CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhc-c----cCCchHHHH
Q 013892 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASV-N----LCSNISGQI 392 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~----~~~~~~~q~ 392 (434)
... + . .++ .| ++++|+||.++|..+..+||+++ ++++++.+...... . ..++.....
T Consensus 216 ~~~-~-~-------~~g---~D---i~~~S~sK~lgg~~~~~GG~v~~---~~~li~~l~~~~~~~~~g~~~~~~~~~~~ 277 (431)
T 3ht4_A 216 EQE-P-C-------HVG---AD---LMAGSLIKNPGGGIVKTGGYIVG---KEQYVEACAYRLTSPGIGAEAGASLYSLQ 277 (431)
T ss_dssp SCC-G-G-------GTT---CS---EEEEETTSGGGTTTCSSCEEEEE---CHHHHHHHHHHHSCTTTTTSCSCCCSCSH
T ss_pred CCC-c-c-------ccC---Ce---EEEcCccccCCCCCCCceEEEEe---cHHHHHHHHHHhccCCcccccCccHHHHH
Confidence 433 1 1 111 23 88999999985423356699987 89999998775431 1 112111122
Q ss_pred HHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 393 LASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++...+. ......++..++.+.+.+.|+++.
T Consensus 278 ~~~~~l~---~~~~~~~~~~~~a~~l~~~L~~~g 308 (431)
T 3ht4_A 278 EMYQGFF---LAPHVAGQALKGAIFTAAFLEKLG 308 (431)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhHhh---hHHHHHHHHHHHHHHHHHHHHhCc
Confidence 2222221 123566777888888888887764
No 179
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.88 E-value=1.4e-21 Score=198.75 Aligned_cols=244 Identities=13% Similarity=0.062 Sum_probs=164.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHH---HhcCCCC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL---LIRSEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~---l~~~~gd 216 (434)
.|+.+++++.+.+.... .|. +..++++++++++.++++ .+++|++|+|+++++..+++. +. .++
T Consensus 74 ~~~~v~~a~~~~~~~~~-----~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~~~al~~ar~~~--~~~ 140 (453)
T 2cy8_A 74 GHPRVNAAIAEALSHGV-----QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETTLLALRVARAFT--GRR 140 (453)
T ss_dssp TCHHHHHHHHHHHTTTC-----SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHHHHHHHHHHHHH--CCC
T ss_pred CCHHHHHHHHHHHHhCC-----CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHHHHHHHHHHHhh--CCC
Confidence 57889999998886521 221 356899999999988764 578999999999999999988 65 457
Q ss_pred EEEEcCCCChhHHHHHHH-----------cCCe------EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 217 GILCPIPQYPLYSASIAL-----------HGGT------LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
.|++.+|+|+++...+.. .|.. ++.++. .|+++|++++++.. .++++|+++..
T Consensus 141 ~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~ 210 (453)
T 2cy8_A 141 MILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAFIAEPV 210 (453)
T ss_dssp EEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSS
T ss_pred EEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEEEECCC
Confidence 899999999876553322 1221 222221 38999999997531 14655544443
Q ss_pred CCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCc
Q 013892 280 GNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGK 358 (434)
Q Consensus 280 ~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~ 358 (434)
+||||.+. +++++++|.++|++||+++|+||+|.++ +.+. ...+ ..++ ..+| + .||||.| | .|+
T Consensus 211 ~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~--~~~~----~~~~-~~~d--i---~s~sK~l-~-~G~ 275 (453)
T 2cy8_A 211 GSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN--HGMQ----ALLD-VQPD--L---TCLAKAS-A-GGL 275 (453)
T ss_dssp EHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT--THHH----HHHT-CCCS--E---EEEEGGG-G-TTS
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc--hhhh----HHhC-CCCc--E---EEEChhh-h-CCc
Confidence 57799765 7999999999999999999999999986 4332 1111 1111 2255 2 2899999 5 499
Q ss_pred eeEEEEEecCCHHHHHHHHH------HhhcccCCchHHHHHHHHHcCC-CCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 359 RGGYMEVTGFSAEVREQIYK------VASVNLCSNISGQILASLVMSP-PKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 359 R~G~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
|+||+++ ++++++.+.. ....+.+.+++++.++...++. . .++..++++++++.+.+.|++..
T Consensus 276 ~~G~v~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~--~~~~~~~~~~~~~~l~~~L~~~~ 345 (453)
T 2cy8_A 276 PGGILGG---REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL--EDDVCAKINDLGQFAREAMNHLF 345 (453)
T ss_dssp SCEEEEE---CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEec---hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999987 8888887754 1223456788888887776653 2 13567888888899998888764
No 180
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.87 E-value=1e-22 Score=200.58 Aligned_cols=249 Identities=12% Similarity=0.066 Sum_probs=174.3
Q ss_pred cccccCCCCCHHHHHHHHHHHHcCCCCC-----CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC-C-EEEcCChHHHHH
Q 013892 132 DRSETQGLFSADSIERAWQILDQIPGRA-----TGAYSHSQGIKGLRDTIAAGIEARDGFPADPN-D-IFLTDGASPAVH 204 (434)
Q Consensus 132 ~~~~~~~~~p~~v~~~~~~~l~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~-i~~t~G~~~al~ 204 (434)
.++.++..+|+.+++++.+.+.+....+ ...| ..+..++++++++.+.+.+|. +++ + +++|+|+++++.
T Consensus 7 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~--~~~~~~i~~t~g~t~a~~ 82 (362)
T 2c0r_A 7 NFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR--GAVYEAVHNEAQARLLALLGN--PTGYKVLFIQGGASTQFA 82 (362)
T ss_dssp ECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT--SHHHHHHHHHHHHHHHHHTTC--CSSEEEEEESSHHHHHHH
T ss_pred eccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC--cHHHHHHHHHHHHHHHHHhCC--CCCcEEEEECCCchHHHH
Confidence 3444455679999999988775431100 1112 234566788888888887774 343 5 578899999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhH--HHHHHHcCCeEEEEecCCCCCCC--CCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 205 MMMQLLIRSENDGILCPIPQYPLY--SASIALHGGTLVPYYLDEATGWG--LETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 205 ~~l~~l~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~--~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
.++..++ ++||+|+++.+.+..+ ...++..| +++.++++.+.+++ +|.++++ +++ ++++|++++|+
T Consensus 83 ~~~~~l~-~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~ 152 (362)
T 2c0r_A 83 MIPMNFL-KEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNE 152 (362)
T ss_dssp HHHHHHC-CTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEE
T ss_pred HHHHhcC-CCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCc
Confidence 9999998 7999999887765442 45677789 99999886322233 4666553 443 79999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCcee
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRG 360 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~ 360 (434)
||||.+++ ++++| +|+++|+|++|..+.. ..++ .. -| +++.|+||.| |++| +
T Consensus 153 n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~-----~~~~----~~-----~d---~~~~s~~K~~-g~~G--~ 204 (362)
T 2c0r_A 153 TIEGAQFK--AFPDT------GSVPLIGDMSSDILSR-----PFDL----NQ-----FG---LVYAGAQKNL-GPSG--V 204 (362)
T ss_dssp TTTTEECS--SCCCC------TTSCEEEECTTTTTSS-----CCCG----GG-----CS---EEEEETTTTT-CCSS--C
T ss_pred Cccceecc--ccccc------CCCEEEEEChhhccCC-----ccch----hH-----Cc---EEEEeccccc-cCcC--c
Confidence 99999755 35555 8999999999986421 1111 11 13 6778999999 7888 9
Q ss_pred EEEEEecCCHHHHHHHHHH------------h-hcccCCchHHHHHHHHHcCCC-C--CChHHHHHHHHHHHHHHHHHHH
Q 013892 361 GYMEVTGFSAEVREQIYKV------------A-SVNLCSNISGQILASLVMSPP-K--VGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 361 G~~~~~~~~~~~~~~l~~~------------~-~~~~~~~~~~q~~~~~~l~~~-~--~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
||+++ ++++++.+.+. . ....+++...|.++..+++.. + .+++.+++++++++.+.+.|++
T Consensus 205 G~l~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 281 (362)
T 2c0r_A 205 TVVIV---REDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ 281 (362)
T ss_dssp EEEEE---EGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEE---cHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 77776555321 1 233477888888887777532 1 3467888889999999998876
Q ss_pred H
Q 013892 425 R 425 (434)
Q Consensus 425 ~ 425 (434)
+
T Consensus 282 ~ 282 (362)
T 2c0r_A 282 S 282 (362)
T ss_dssp S
T ss_pred c
Confidence 5
No 181
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.87 E-value=3.1e-22 Score=205.42 Aligned_cols=254 Identities=12% Similarity=0.041 Sum_probs=174.4
Q ss_pred CCHHHHHHHHHHHHcCCC---CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC--CCEEEcCChHHHHHHHHHHHhcCC
Q 013892 140 FSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADP--NDIFLTDGASPAVHMMMQLLIRSE 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~l~~l~~~~ 214 (434)
+|+.+++++.+.+.+... .+...|....+..++++.+.+++.+.+|...+. .+|++++|+ +++..++.+++ +|
T Consensus 56 ~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all-~p 133 (483)
T 1rv3_A 56 ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALV-EP 133 (483)
T ss_dssp CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHT-CT
T ss_pred CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhc-CC
Confidence 378899988877765221 011235555567889988889998888855322 248888888 88888788888 79
Q ss_pred CCEEEEcCCCChhHHH--------HHHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 215 NDGILCPIPQYPLYSA--------SIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 215 gd~Vlv~~p~y~~~~~--------~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
||+|++++|.|..+.. .+...| .++++++++++ +|.+|+++|++++++. ++++|++ +++||+
T Consensus 134 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~-~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~- 205 (483)
T 1rv3_A 134 HGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD-TGYIDYDRLEENARLF-----HPKLIIA-GTSCYS- 205 (483)
T ss_dssp TCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-
T ss_pred CCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC-CCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-
Confidence 9999999999887643 223344 56666655643 5789999999999843 8999999 999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
.+++ +++|.++|+++|+++|+|++|. ++++.+. ..+.. . +.| |++.|++|+| +|+|+||+
T Consensus 206 ~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~--~~~p~---~-----~~d---iv~~s~~K~l---~GprgG~i 266 (483)
T 1rv3_A 206 RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV--VPSPF---E-----HCH---VVTTTTHKTL---RGCRAGMI 266 (483)
T ss_dssp SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS--SCCGG---G-----TCS---EEEEESSGGG---CCCSCEEE
T ss_pred CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC--CCCCC---C-----CCc---EEEecCcccC---CCCCceEE
Confidence 8887 8999999999999999999986 4333332 11110 1 123 7889999987 48999999
Q ss_pred EEecCCH---------------HHHHHHHHHhh--cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 364 EVTGFSA---------------EVREQIYKVAS--VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 364 ~~~~~~~---------------~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++ ++ ++.+.+..... ....++.....+...++.. ....++..+++.++++.+.+.|++
T Consensus 267 ~~---~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (483)
T 1rv3_A 267 FY---RRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE 343 (483)
T ss_dssp EE---ECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE---cchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 87 33 24444443321 2334444444433333321 123456778888888888888876
Q ss_pred H
Q 013892 425 R 425 (434)
Q Consensus 425 ~ 425 (434)
+
T Consensus 344 ~ 344 (483)
T 1rv3_A 344 L 344 (483)
T ss_dssp T
T ss_pred c
Confidence 5
No 182
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.87 E-value=1.2e-21 Score=199.00 Aligned_cols=267 Identities=12% Similarity=0.092 Sum_probs=172.7
Q ss_pred CCccccccc----C-CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHH
Q 013892 128 PSILDRSET----Q-GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPA 202 (434)
Q Consensus 128 p~~l~~~~~----~-~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 202 (434)
...||+..+ . ...++.+++++.+.+... ..|....+..+.+.++++++.+.++ ...++|++|+|++++
T Consensus 44 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-----~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 116 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKI-----AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA 116 (448)
T ss_dssp CEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTC-----SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhc-----cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 346676664 1 234799999999988753 2233445566778888888877764 345799999999999
Q ss_pred HHHHHHHHhcC---C----CCEEEEcCCCChhHHHHHHHcCCe-------------EEEEecCCCCCCCC----------
Q 013892 203 VHMMMQLLIRS---E----NDGILCPIPQYPLYSASIALHGGT-------------LVPYYLDEATGWGL---------- 252 (434)
Q Consensus 203 l~~~l~~l~~~---~----gd~Vlv~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~---------- 252 (434)
+..+++.+... + +|+|++.+|+|+.+.......+.. +..++.. ..|..
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhH
Confidence 99999988621 4 499999999998876554443322 1222222 22332
Q ss_pred -CHHHHHHHHHHHHhcCCCeeEEEEecCC-CCCc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 253 -ETSEVKKQLEAAKAKGITVRALVVINPG-NPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 253 -d~~~l~~~l~~~~~~g~~~~~i~l~~p~-NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
|+++|+++++... .++++|+++.++ |++| .+.+++.+++|.++|++||+++|+||+|.++.+.+. ....
T Consensus 195 ~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~a~--- 266 (448)
T 3dod_A 195 QCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK--MFAC--- 266 (448)
T ss_dssp HHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGG---
T ss_pred HHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--hhhh---
Confidence 4888999887321 146566665555 8888 456788899999999999999999999999655443 2211
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH-------Hh-hcccCCchHHHHHHHHHcCC
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK-------VA-SVNLCSNISGQILASLVMSP 400 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~q~~~~~~l~~ 400 (434)
...+ ..++ +.+|||++ | .| +|+||+++ ++++++.+.+ .. ..+.+.+++++.++...|+.
T Consensus 267 -~~~~-~~~d-----i~t~sK~l-~-~G~~~ig~v~~---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~ 334 (448)
T 3dod_A 267 -EHEN-VQPD-----LMAAGKGI-T-GGYLPIAVTFA---TEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLAL 334 (448)
T ss_dssp -GGGT-CCCS-----EEEECGGG-G-TTSSCCEEEEE---EHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHH
T ss_pred -hhcC-CCCC-----EEEecccc-c-CCcCceEEEEE---CHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHH
Confidence 1111 2244 23689999 5 49 59999988 8999998865 32 24567889999988887753
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
.+. ++..++.+++.+.+++.|++
T Consensus 335 ~~~-~~~~~~~~~~~~~~~~~l~~ 357 (448)
T 3dod_A 335 FES-ENIVEQVAEKSKKLHFLLQD 357 (448)
T ss_dssp HHH-TTHHHHHHHHHHHHHHHHHH
T ss_pred Hhc-ccHHHHHHHHHHHHHHHHHH
Confidence 111 24566677777777777766
No 183
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.87 E-value=8.2e-22 Score=197.56 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=165.5
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHH----
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSAS---- 231 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~---- 231 (434)
.+.|+.. |..+|++.+|+++ | .+..++ ++|+++++..++..++ ++||+|+++. |.|..+...
T Consensus 53 ~~~y~~~-~~~~Le~~lA~l~----g----~e~alv~p~~~sGt~Ai~~al~all-~~GD~Vl~~~~~~y~~~~~~~~~~ 122 (409)
T 3jzl_A 53 GYGYDDE-GRDTLERVYATVF----K----TEAALVRPQIISGTHAISTVLFGIL-RPDDELLYITGQPYDTLEEIVGIR 122 (409)
T ss_dssp TTCTTCH-HHHHHHHHHHHHH----T----CSEEEEETTSCSHHHHHHHHHHHHC-CTTCEEEECSSSCCTTHHHHHTSS
T ss_pred CCCCChh-HHHHHHHHHHHHh----C----CCcEEEECCCccHHHHHHHHHHHhc-CCCCEEEEeCCCCcHhHHHHHhcc
Confidence 3445543 5788888888887 3 234455 8899999999999998 7999999998 999988754
Q ss_pred ------HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec----CCCCCccCCCHHHHHHHHHHHHH
Q 013892 232 ------IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN----PGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 232 ------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~----p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
++..|++++.+++++ ++.+|+++|++++++ ++++|++++ |+||||.+. ++++|+++|++
T Consensus 123 g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v~---~l~~I~~la~~ 191 (409)
T 3jzl_A 123 KQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTIE---KIKEMIVFVKN 191 (409)
T ss_dssp SSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHH---HHHHHHHHHHH
T ss_pred cchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCccc---cHHHHHHHHHh
Confidence 456799999998865 357999999999976 799999999 999999874 59999999999
Q ss_pred --cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH
Q 013892 302 --EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 302 --~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~ 378 (434)
+|+++|+|++|..+++... + . .++ .| |+++|+||.+ |.+| .++||+++ ++++++.+..
T Consensus 192 ~~~~~~livD~a~~~~~~~~~-p-~-------~~g---~D---iv~~S~sK~l-gg~~~~~GG~v~~---~~~li~~l~~ 252 (409)
T 3jzl_A 192 INPEVIVFVDNCYGEFVEYQE-P-P-------EVG---AD---IIAGSLIKNP-GGGLAKTGGYIAG---KEALVDLCGY 252 (409)
T ss_dssp HCTTCEEEEECTTCTTTSSCC-S-G-------GGT---CS---EEEEETTSGG-GTTTCSSCEEEEE---CHHHHHHHHH
T ss_pred hCCCCEEEEeCCcccccccCC-c-c-------ccC---Ce---EEEECccccC-CccCCceEEEEEe---CHHHHHHHHH
Confidence 9999999999998765432 1 1 111 23 8899999999 4355 56899987 8999999987
Q ss_pred Hhh---c-ccCCchHH-HHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VAS---V-NLCSNISG-QILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 379 ~~~---~-~~~~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
... . ....+... +.++...+. .....+++..+++..+.+.|+++.
T Consensus 253 ~~~~~~~g~~~g~~~~~~~~~l~gl~---~~~~r~~~~~~~a~~la~~L~~~g 302 (409)
T 3jzl_A 253 RLTTPGIGREAGASLYSLLEMYQGFF---LAPHVTAQAIKGARFTAAMLAEFG 302 (409)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhccccccccccccHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 432 1 11122221 222332221 224567777888888888887764
No 184
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.87 E-value=3e-21 Score=197.67 Aligned_cols=271 Identities=16% Similarity=0.116 Sum_probs=188.3
Q ss_pred CCCccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+||+..+ .. ..++.+++++.+.++... ..| ...+..+.+.++++++.+.++ .+.++|++++|+++
T Consensus 53 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~----~~~-~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse 125 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP----YAS-PWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGST 125 (476)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC----CCC-TTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHH
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc----Ccc-cCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHH
Confidence 3446777666 12 358999999999988742 112 224567788899999988765 34579999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCCe---------------EEEEecCCCCCCCCC------
Q 013892 202 AVHMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGGT---------------LVPYYLDEATGWGLE------ 253 (434)
Q Consensus 202 al~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~d------ 253 (434)
++..+++.+.. ..+++|++.+|+|.++.......+.. .+.+|..... |..|
T Consensus 126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~ 204 (476)
T 3i5t_A 126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLD 204 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHH
Confidence 99999998852 13579999999999887665544332 2222221111 2223
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
+++|++.++.... .++++|+++.++|++|. +++++.+++|.++|++||+++|+||+|.++.+.+. +..+..
T Consensus 205 ~~~~~le~~i~~~~~--~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~--~~~~~~-- 278 (476)
T 3i5t_A 205 DLVQEFEDRIESLGP--DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE--WFASEK-- 278 (476)
T ss_dssp HHHHHHHHHHHHHCG--GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHHH--
T ss_pred HHHHHHHHHHHhcCC--CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC--ceeeec--
Confidence 7888888874211 15667777777888886 78889999999999999999999999999655543 222210
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHcCCC
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~ 401 (434)
.+ ...+| ++ +|||++ | .| +|+||+++ ++++++.+... ...+.+.+++++.++...|+..
T Consensus 279 -~~-~v~pd--i~---t~sK~l-~-~G~~plg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~ 346 (476)
T 3i5t_A 279 -VF-GVVPD--II---TFAKGV-T-SGYVPLGGLAI---SEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELM 346 (476)
T ss_dssp -TT-CCCCS--EE---EECGGG-G-TTSSCCEEEEE---CHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHH
T ss_pred -cc-CCCcc--hh---hhhhhh-c-CCCcCeEEEEE---CHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHH
Confidence 11 13356 23 689999 4 48 99999988 99999988753 2245578899999888887532
Q ss_pred CCChHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
+. ++..+..+++.+.+.+.|++
T Consensus 347 ~~-~~~~~~~~~~~~~l~~~L~~ 368 (476)
T 3i5t_A 347 ER-EGIVDQAREMADYFAAALAS 368 (476)
T ss_dssp HH-TTHHHHHHHHHHHHHHHHHT
T ss_pred Hh-HHHHHHHHHHHHHHHHHHHH
Confidence 11 35667777777777777764
No 185
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.87 E-value=1.6e-21 Score=198.69 Aligned_cols=269 Identities=12% Similarity=0.025 Sum_probs=180.9
Q ss_pred Cccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.+||+..+ .. ..++.+++++.+.+++... |....+..+...++++.+.+.++ .+.++|++|+|+++++
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~-----~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sGseA~ 148 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNH-----VMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSGSVSV 148 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSC-----CCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccC-----ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcHHHHH
Confidence 57888776 22 3589999999998887421 11111222344444444444443 4567999999999999
Q ss_pred HHHHHHHhcC------CC-CEEEEcCCCChhHHHHHHHcCC--------------eEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 204 HMMMQLLIRS------EN-DGILCPIPQYPLYSASIALHGG--------------TLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 204 ~~~l~~l~~~------~g-d~Vlv~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
..+++.+... +| +.|++.+++|..+.......+. .+..++.........|+++|+++++
T Consensus 149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~ 228 (457)
T 3tfu_A 149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLA 228 (457)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHH
Confidence 9999888621 44 5899999999876554444321 2223333221111247899999997
Q ss_pred HHHhcCCCeeEEEEec-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCc
Q 013892 263 AAKAKGITVRALVVIN-PGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDI 340 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~-p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 340 (434)
+.. .++++|+++. ++||+|.++ +.+.+++|.++|++||+++|+||+|.++.+.+. ...+.. .+ ..+|
T Consensus 229 ~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~--~~a~~~----~~-~~pd- 297 (457)
T 3tfu_A 229 QHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA--LFAADH----AG-VSPD- 297 (457)
T ss_dssp HHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHH----HT-CCCS-
T ss_pred hCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc--hhHhHh----cC-CCce-
Confidence 531 1677788777 899999877 778899999999999999999999999655443 222211 11 2355
Q ss_pred eEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH------hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 341 SLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV------ASVNLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 341 ~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
++ ||||+++ .| +|+||+++ ++++++.+... ...+.+.++++++++...|+..+. +...++.++
T Consensus 298 -ii---t~sK~l~--gG~~~lG~v~~---~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~-~~~~~~~~~ 367 (457)
T 3tfu_A 298 -IM---CVGKALT--GGYLSLAATLC---TADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG-QDWRTRITE 367 (457)
T ss_dssp -EE---EECGGGG--TTSSCCEEEEE---EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT-SCHHHHHHH
T ss_pred -EE---EEChhhh--CCCcceEEEEE---cHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh-hHHHHHHHH
Confidence 33 8999984 36 79999988 89999988621 224557888988888777752111 256677777
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
.++.+.+.|++.
T Consensus 368 ~~~~l~~~L~~l 379 (457)
T 3tfu_A 368 LAAGLTAGLDTA 379 (457)
T ss_dssp HHHHHHHHHGGG
T ss_pred HHHHHHHHHHHH
Confidence 788888777764
No 186
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.87 E-value=1.9e-21 Score=197.22 Aligned_cols=259 Identities=11% Similarity=0.053 Sum_probs=178.4
Q ss_pred CCCccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....|||..+ +.+ .++++++++.+.+..... ....|. .....++++.+++++ | .++|++++|+++
T Consensus 75 g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~-~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~sGse 144 (439)
T 2oat_A 75 GRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTL-TSRAFY-NNVLGEYEEYITKLF----N----YHKVLPMNTGVE 144 (439)
T ss_dssp CCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSC-CCTTSE-ESSHHHHHHHHHHHH----T----CSEEEEESSHHH
T ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCc-ccCccC-CHHHHHHHHHHHHhc----C----CCEEEEeCCHHH
Confidence 3457788775 333 789999999998876421 111232 233567777777765 3 578999999999
Q ss_pred HHHHHHHHHhc--------CCC-CEEEEcCCCChhHHH-HHHHcC------------CeEEEEecCCCCCCCCCHHHHHH
Q 013892 202 AVHMMMQLLIR--------SEN-DGILCPIPQYPLYSA-SIALHG------------GTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 202 al~~~l~~l~~--------~~g-d~Vlv~~p~y~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
++..+++.+.. .+| |+|++.+|+|+.+.. .+...| ..++.++. .|+++|++
T Consensus 145 A~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~ 217 (439)
T 2oat_A 145 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALER 217 (439)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHH
Confidence 99999988641 256 899999999977543 444434 35566553 27999999
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
+++. .++++|+++..+|++|. +++.+++++|.++|++||+++|+||+|.++.+.+. ...+ ...+ ..+
T Consensus 218 ~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~--~~~~----~~~~-~~~ 285 (439)
T 2oat_A 218 ALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR--WLAV----DYEN-VRP 285 (439)
T ss_dssp HTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGG----GGGT-CCC
T ss_pred HhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc--chhH----HHhC-CCC
Confidence 8852 15766665444677896 56889999999999999999999999988544432 2211 1111 225
Q ss_pred CceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERD 416 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 416 (434)
| ++ ||||.+ | .| +|+||+++ ++++++.+.... ..+.+.+++++.++...++..+. ++..++.++.++
T Consensus 286 D--i~---t~sK~l-~-~G~~~~G~v~~---~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~ 354 (439)
T 2oat_A 286 D--IV---LLGKAL-S-GGLYPVSAVLC---DDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE-ENLAENADKLGI 354 (439)
T ss_dssp S--EE---EECGGG-G-TTSSCCEEEEE---CHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHH
T ss_pred c--EE---Eecccc-c-CCCCCeEEEEE---CHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh-hhHHHHHHHHHH
Confidence 5 22 899999 5 58 99999988 888887775432 24457788888877777653211 246677777888
Q ss_pred HHHHHHHHH
Q 013892 417 GILSSLARR 425 (434)
Q Consensus 417 ~l~~~L~~~ 425 (434)
.+.+.|++.
T Consensus 355 ~l~~~L~~l 363 (439)
T 2oat_A 355 ILRNELMKL 363 (439)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHHh
Confidence 888777654
No 187
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.87 E-value=8.8e-22 Score=200.86 Aligned_cols=265 Identities=12% Similarity=0.004 Sum_probs=172.7
Q ss_pred CCccccccc-CCCCCHHHHHHHHHHHHcCCCCCC----CCCCCC-cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 128 PSILDRSET-QGLFSADSIERAWQILDQIPGRAT----GAYSHS-QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 128 p~~l~~~~~-~~~~p~~v~~~~~~~l~~~~~~~~----~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
++.+.|+.+ ....|+.+.+++.+.+........ ..|.+. .-..++++.+++++ | +++++|++|+|+++
T Consensus 66 ~~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~t~g~t~ 139 (465)
T 3e9k_A 66 ENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV----G--ANEKEIALMNALTV 139 (465)
T ss_dssp CBCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH----T--CCGGGEEECSCHHH
T ss_pred CCeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc----C--CCcCCEEEECCHHH
Confidence 345666666 334555666665555533210001 122221 22355777777765 4 46789999999999
Q ss_pred HHHHHHHHHhcCCC---CEEEEcCCCChhHHH----HHHHcCCeEE----EEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 202 AVHMMMQLLIRSEN---DGILCPIPQYPLYSA----SIALHGGTLV----PYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 202 al~~~l~~l~~~~g---d~Vlv~~p~y~~~~~----~~~~~g~~~~----~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
++.+++.+++ .+| ++|+++.|+|+.... .++..|++++ .+.. .++++.+|+++|+++|++.. .+
T Consensus 140 al~~~~~~~~-~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~-~~~~~~~d~~~l~~~i~~~~---~~ 214 (465)
T 3e9k_A 140 NLHLLMLSFF-KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP-REGEETLRIEDILEVIEKEG---DS 214 (465)
T ss_dssp HHHHHHHHHC-CCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC-CTTCSSCCHHHHHHHHHHHG---GG
T ss_pred HHHHHHHHhc-cccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec-CCCCCccCHHHHHHHHHhcC---CC
Confidence 9999999997 455 459999999998444 6667898752 2221 22456889999999997531 16
Q ss_pred eeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCC
Q 013892 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSK 350 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK 350 (434)
+++|++++|+||||.+++ +++|.++|+++|+++|+|++|...... ..+. .++ .| +++.|++|
T Consensus 215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~-----~~~~----~~~---~D---~~~~s~~K 276 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVE-----LYLH----DWG---VD---FACWCSYK 276 (465)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC-----CCHH----HHT---CC---EEEECSSS
T ss_pred eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcC-----Cchh----hcC---CC---EEEECccc
Confidence 899999999999999999 788999999999999999998753221 1221 112 23 77899999
Q ss_pred CCCCCCCceeEEEEEecCCHHHHHHHHHHhh--------------------------cccCCchHHHHHHHHHcCCC--C
Q 013892 351 GYYGECGKRGGYMEVTGFSAEVREQIYKVAS--------------------------VNLCSNISGQILASLVMSPP--K 402 (434)
Q Consensus 351 ~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~--------------------------~~~~~~~~~q~~~~~~l~~~--~ 402 (434)
.+.|-|| ++|++.+ ++++++.+..... ....++..+..++...++.- .
T Consensus 277 ~l~~gp~-~~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~ 352 (465)
T 3e9k_A 277 YLNAGAG-GIAGAFI---HEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA 352 (465)
T ss_dssp TTCCCTT-CCCEEEE---CGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCC-ceEEEEE---cHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc
Confidence 9842233 6899877 6666554421100 01145555555544444321 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++.++++.+.++.+.+.|++.
T Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 353 TMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhh
Confidence 24567777888888888888764
No 188
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=2.5e-20 Score=185.19 Aligned_cols=240 Identities=14% Similarity=0.119 Sum_probs=171.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHH-HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-hcCCCC
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTI-AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSEND 216 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~i-a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l-~~~~gd 216 (434)
..++.+++++.+.+.... ...|+ ....+|++++ |+++ | ..+++++++|+++++..++..+ + ++||
T Consensus 13 ~~~~~i~~a~~~~~~~~~---~~~~~--~~~~~l~~~~~a~~~----g---~~~~~v~~~sgt~al~~al~~l~~-~~Gd 79 (377)
T 3ju7_A 13 VPVIEYLDELKEIDASHI---YTNYG--PINQRFEQTIMSGFF----Q---NRGAVTTVANATLGLMAAIQLKKR-KKGK 79 (377)
T ss_dssp CCGGGGHHHHHHHHHHTC---CSSSC--HHHHHHHHHHHHHTS----T---TCSEEEEESCHHHHHHHHHHHHSC-TTCC
T ss_pred CCcHHHHHHHHHHHHcCC---cccCC--HHHHHHHHHHHHHHh----C---CCCeEEEeCCHHHHHHHHHHHcCC-CCcC
Confidence 456778888888887631 11133 3478999999 9986 2 1567899999999999999998 6 7999
Q ss_pred EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC--eeEEEEecCCCCCccCCCHHHHHH
Q 013892 217 GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT--VRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~--~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
+|+++.|+|..+...++..|++++.+++++ ++|.+|+++|++++... + +++|+ |+||+|...+ +++
T Consensus 80 ~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~-----~~~tk~v~---~~~~~G~~~~---~~~ 147 (377)
T 3ju7_A 80 YALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEEL-----KEEVAIVV---PYATFGSWMN---LEE 147 (377)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHH-----GGGEEEEC---CBCGGGBCCC---CHH
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcC-----CCCceEEE---EECCCCCccC---HHH
Confidence 999999999999999999999999999875 36899999999998432 5 88877 7788999988 788
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecC--CCCCCCCCCceeEEEEEecCCHHH
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSV--SKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~--SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
|.++|+ +|++||+|++|......+.. .++....+ +.+.|| +|.+ + +| ++|+++. .++++
T Consensus 148 i~~la~-~~~~vi~D~a~a~g~~~~~~----------~~g~~~~d---~~~~S~~~~K~l-~-~g-~gG~~~~--~~~~l 208 (377)
T 3ju7_A 148 YEELEK-KGVPVVVDAAPGFGLMNGGM----------HYGQDFSG---MIIYSFHATKPF-G-IG-EGGLIYS--KNEED 208 (377)
T ss_dssp HHHHHH-TTCCBEEECTTCTTCEETTE----------ETTTTCSS---EEEEECBTTSSS-C-CB-SCEEEEE--SCHHH
T ss_pred HHHHHh-cCCEEEEECCCccCCeECCE----------eccCCCCc---EEEEECCCCCcC-C-CC-CcEEEEE--CCHHH
Confidence 888999 99999999999854322111 11001123 455565 6998 5 35 6888864 47888
Q ss_pred HHHHHHHhhc-------------ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVASV-------------NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 373 ~~~l~~~~~~-------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++..++.. ....+.+.++++...++ .++...++.++.++.+.+.|++.
T Consensus 209 ~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~---~l~~~~~~~~~~~~~~~~~L~~~ 271 (377)
T 3ju7_A 209 IQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMK---KWDDKLKERTRISEWYKQLLQSN 271 (377)
T ss_dssp HHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888776531 22345555555544442 23444555555555566655543
No 189
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.87 E-value=3.2e-20 Score=186.52 Aligned_cols=219 Identities=16% Similarity=0.150 Sum_probs=157.6
Q ss_pred CCCCCCC--cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----H
Q 013892 160 TGAYSHS--QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----A 233 (434)
Q Consensus 160 ~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~ 233 (434)
.+.|+.. .+..++++.+++++ | .+++++|+|+++++..++..++ ++||+|+++.|+|..+...+ +
T Consensus 47 ~~~y~~~~~~~~~~l~~~la~~~----g----~~~~~~~~~gt~a~~~al~~l~-~~gd~vi~~~~~~~~~~~~~~~~~~ 117 (412)
T 2cb1_A 47 GYVYARQKDPTAKALEERLKALE----G----ALEAVVLASGQAATFAALLALL-RPGDEVVAAKGLFGQTIGLFGQVLS 117 (412)
T ss_dssp SCSBTTTCCHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETTCCHHHHHHHHHTTT
T ss_pred CcCcCCCCChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEeCCCchhHHHHHHHHHH
Confidence 3456543 55788888888887 3 2489999999999999999887 79999999999998766654 3
Q ss_pred HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 234 LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 234 ~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
..|++++.++. |+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|.
T Consensus 118 ~~g~~~~~~~~--------~~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 118 LMGVTVRYVDP--------EPEAVREALSA------KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp TTTCEEEEECS--------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred HcCCEEEEECC--------CHHHHHHHhcc------CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCc
Confidence 47999998875 38888888876 7999999999999999998 9999999999999999999998
Q ss_pred CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-----------------------
Q 013892 314 ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA----------------------- 370 (434)
Q Consensus 314 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~----------------------- 370 (434)
.+.+... .. ..+ .+ +++.|+||.+ +.+|.|+|++++.. +.
T Consensus 181 ~~~~~~~----~~-----~~~---~d---i~~~S~~K~~-~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~ 243 (412)
T 2cb1_A 181 AAGALCR----PL-----AWG---AH---VVVESLTKWA-SGHGSVLGGAVLSR-ETELWRNYPQFLQPDLKGQIPWEAL 243 (412)
T ss_dssp TTTTSCC----GG-----GGT---CS---EEEEETTTTT-TCSSCCCCEEEEEC-CCSGGGGSGGGGCC-------HHHH
T ss_pred cccccCC----cc-----ccC---Ce---EEEECCcccc-cCCCCcEEEEEEec-cccccccccccccccccccchhhcc
Confidence 7522111 11 111 23 8899999999 66999999998633 12
Q ss_pred ---HHHHHHHHHh-h-cccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 371 ---EVREQIYKVA-S-VNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 371 ---~~~~~l~~~~-~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
++.+.+.... . .....++...+++...++ .+....++..+..+.+.+.|.+
T Consensus 244 ~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~---~l~~~~~~~~~~~~~l~~~L~~ 299 (412)
T 2cb1_A 244 RARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE---TVALRVARMSETARFLAERLQG 299 (412)
T ss_dssp GGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG---GHHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc---hHHHHHHHHHHHHHHHHHHHHc
Confidence 4445554433 2 222335555555444442 2234444455666666666654
No 190
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.87 E-value=1.5e-21 Score=196.46 Aligned_cols=224 Identities=15% Similarity=0.132 Sum_probs=162.7
Q ss_pred CCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE---cCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHH------
Q 013892 161 GAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL---TDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSA------ 230 (434)
Q Consensus 161 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~---t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~------ 230 (434)
+.|+.. |..+|++.+|+++ | .+..++ ++|+++++..++.+++ +|||+|++++ |.|..+..
T Consensus 69 y~Y~~~-g~~~Le~~lA~l~----g----~e~alv~p~~~sGt~A~~~al~all-~pGD~Vl~~~~~~y~~~~~~~g~~~ 138 (427)
T 3hvy_A 69 YGYNDI-GRDSLDRVYANIF----N----TESAFVRPHFVNGTHAIGAALFGNL-RPNDTMMSICGMPYDTLHDIIGMDD 138 (427)
T ss_dssp TCTTCH-HHHHHHHHHHHHH----T----CSEEEEETTCCSHHHHHHHHHHHTC-CTTCEEEECSSSCCGGGHHHHTCCT
T ss_pred CCCCch-hHHHHHHHHHHHh----C----CCceEEeCCCCcHHHHHHHHHHHhc-CCCCEEEEeCCCCchhHHHHhcccc
Confidence 345444 6788888888887 3 334455 7888999999999998 7999999999 99998763
Q ss_pred -----HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec----CCCCCccCCCHHHHHHHHHHHHH
Q 013892 231 -----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN----PGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 231 -----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~----p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
.++..|++++.++++ ++.+|+++|++++++. .++|+|++++ |+||||.+ .++++|+++|++
T Consensus 139 ~~~~~~l~~~G~~~~~v~~~---~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~~ 208 (427)
T 3hvy_A 139 SKKVGSLREYGVKYKMVDLK---DGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIRE 208 (427)
T ss_dssp TCCSCCTGGGTCEEEECCCB---TTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHHH
T ss_pred chhhhHHHHcCCEEEEecCC---CCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccH---HHHHHHHHHHHH
Confidence 345679999999882 4589999999999830 1799999998 99999876 569999999999
Q ss_pred --cCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHH
Q 013892 302 --EGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYK 378 (434)
Q Consensus 302 --~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~ 378 (434)
+|+++|+|++|..+++... + . ..+ .| |+++|+||.+ |.+| .++||+++ ++++++.+..
T Consensus 209 ~~~g~~livD~a~~~~~~~~~-p-~-------~~g---aD---iv~~S~sK~l-gg~g~~~GG~i~~---~~~li~~l~~ 269 (427)
T 3hvy_A 209 VNENVIVFVDNCYGEFVEEKE-P-T-------DVG---AD---IIAGSLIKNI-GGGIATTGGYIAG---KEEYVTQATF 269 (427)
T ss_dssp HCSSSEEEEECTTCTTTSSSC-G-G-------GGT---CS---EEEEETTSGG-GTTTCCSCEEEEE---CHHHHHHHHH
T ss_pred hCCCCEEEEECCccccccCCC-C-c-------ccC---Ce---EEEECCcccc-cccccceEEEEEE---CHHHHHHHHH
Confidence 8999999999998765432 1 1 111 23 8899999999 4344 67899987 8999999987
Q ss_pred Hhh-ccc---CCchHH-HHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 379 VAS-VNL---CSNISG-QILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 379 ~~~-~~~---~~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
... ... ..+++. ..++...+. ......++..++...+.+.|+++.
T Consensus 270 ~~~~~~~g~~~~~~~~~a~~~~~gl~---~~~~r~~~~~~~a~~la~~L~~~g 319 (427)
T 3hvy_A 270 RVTVPGIGGECGSTFGVMRSLYEGLF---MAPHVTIEAVKGAVFCARIMELAG 319 (427)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhhcCCcccccCCCHHHHHHHHHhHh---HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 542 111 112122 233332221 123566777778888888887654
No 191
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.87 E-value=2e-21 Score=197.45 Aligned_cols=249 Identities=13% Similarity=0.012 Sum_probs=169.2
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCC---cchHHHH--HHHH-HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHS---QGIKGLR--DTIA-AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~---~G~~~lr--~~ia-~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
+|+.+++++.+.+.+.. ..+|+.. .|...++ ++++ +++.+.+|.+ . ..++++|+++++..++.+++ +
T Consensus 57 ~~~~v~~a~~~~~~~~~---~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~--~-~~v~~~sGs~a~~~a~~~~~-~ 129 (447)
T 3h7f_A 57 VPRAVLQAQGSVLTNKY---AEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE--F-ANVQPHSGAQANAAVLHALM-S 129 (447)
T ss_dssp CCHHHHHHHTSGGGGCC---CCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS--E-EECCCSSHHHHHHHHHHHHC-C
T ss_pred CCHHHHHHHHHHhcCCc---cccCCcccccCccHHHHHHHHHHHHHHHHHcCCC--c-eEEEeCCHHHHHHHHHHHhc-C
Confidence 47889998877765321 2233332 2444444 5555 6666666632 2 23337778899999999998 7
Q ss_pred CCCEEEEcCCCChhH-HH----HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCC
Q 013892 214 ENDGILCPIPQYPLY-SA----SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLA 288 (434)
Q Consensus 214 ~gd~Vlv~~p~y~~~-~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~ 288 (434)
+||+|+++.|+|..+ .. .+...+..+++++++++ ++.+|+++|+++++.. ++++|++++|+||++.
T Consensus 130 ~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~-----~~~~i~~~~~~~~~~~--- 200 (447)
T 3h7f_A 130 PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLIDMDAVRATALEF-----RPKVIIAGWSAYPRVL--- 200 (447)
T ss_dssp TTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSCCHHHHHHHHHHH-----CCSEEEEECSSCCSCC---
T ss_pred CCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCcCHHHHHHHHHhc-----CCeEEEEcCCCCCCcc---
Confidence 999999999998762 11 12224567777777644 4689999999999754 7889999999999987
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEec
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 367 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~ 367 (434)
++++|.++|+++|+++|+||+|. ++.+.+. ..+.. . ..+ |++.|+||+| + |+|+||+++
T Consensus 201 --~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~--~~~~~---~-----~~d---i~~~s~sK~l-~--G~~gG~i~~-- 260 (447)
T 3h7f_A 201 --DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL--HPSPV---P-----HAD---VVSTTVHKTL-G--GGRSGLIVG-- 260 (447)
T ss_dssp --CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCST---T-----TCS---EEEEESSGGG-C--CCSCEEEEE--
T ss_pred --CHHHHHHHHHHcCCEEEEECCchhhhhcCCC--CCCCC---C-----CCc---EEEecCCcCC-C--CCCeEEEEE--
Confidence 48999999999999999999974 3344332 11111 1 123 7799999988 3 899999987
Q ss_pred CCHHHHHHHHHHhh--cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 368 FSAEVREQIYKVAS--VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 368 ~~~~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++++.+.+... ...+++...+.++...+.. .++.++..+++.++++.+.+.|+++
T Consensus 261 -~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 261 -KQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp -CGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred -CHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7888888877643 2333444333333333321 1234567788888888888888765
No 192
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.87 E-value=4.7e-21 Score=195.30 Aligned_cols=296 Identities=13% Similarity=0.076 Sum_probs=185.5
Q ss_pred hcccccccchhHHHHHHHHHHHhcCCCCCCcccceeccCCCCcccCCCChhHHHHHHhhcCCCCcccccccCCCCCHHHH
Q 013892 66 LKCEYAVRGEIVSIAQRLQQELQTNPGSHSFDEILYCNIGNPQSLGQQPITFFREVLALCDHPSILDRSETQGLFSADSI 145 (434)
Q Consensus 66 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~vi~~~iG~p~~~~~~p~~~~r~v~~~~~~p~~l~~~~~~~~~p~~v~ 145 (434)
..++.+....+..++.+++.+ | .+++++..|++- ||+..+... +.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~---g------~~~~~~~~~~~y----------------------lD~~~~~~~--~~v~ 56 (467)
T 2oqx_A 10 RVIEPVKRTTRAYREEAIIKS---G------MNPFLLDSEDVF----------------------IDLLTDSGT--GAVT 56 (467)
T ss_dssp CCCCCCCCCCHHHHHHHHHHT---T------SCGGGSCGGGCS----------------------EECSCCSSC--SCCC
T ss_pred eeecccccccHHHHHHHHHHc---C------CCceeccCCCee----------------------EecccCCCc--HHHH
Confidence 344444444456666666654 1 467888887753 344333111 5567
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCC-----C----C
Q 013892 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSE-----N----D 216 (434)
Q Consensus 146 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~-----g----d 216 (434)
+++.+.+.. +...|++..|..+|++++++++ | .+++++|+|+++|+..++.+++ ++ | |
T Consensus 57 ~a~~~~l~~----~~~~y~~~~~~~~l~~~la~~~----~----~~~v~~t~~gt~A~~~al~~~~-~~~~~~~G~~~~d 123 (467)
T 2oqx_A 57 QSMQAAMMR----GDEAYSGSRSYYALAESVKNIF----G----YQYTIPTHQGRGAEQIYIPVLI-KKREQEKGLDRSK 123 (467)
T ss_dssp HHHHHHTTS----CCCCSSSCHHHHHHHHHHHHHH----C----CSEEEEEC--CCSHHHHHHHHH-HHHHHHHCCCTTT
T ss_pred HHHHHHhcc----CcceeccCchhHHHHHHHHHHh----C----cCcEEEcCCcHHHHHHHHHHHh-ccccccCCCCccc
Confidence 777766643 2346888888999999999998 2 3689999999999999999987 57 8 9
Q ss_pred EEEEcCCCChhHHHHHHHcCCeEEEEecC----CC----CCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC-ccCC
Q 013892 217 GILCPIPQYPLYSASIALHGGTLVPYYLD----EA----TGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT-GQVL 287 (434)
Q Consensus 217 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~----~~----~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt-G~~~ 287 (434)
+|++..+.|..+.......|+.++..... .. .++.+|+++|++++++.. ..++++|++++|+||| |.++
T Consensus 124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~ 201 (467)
T 2oqx_A 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPV 201 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCC
T ss_pred eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccC
Confidence 98888655566667777778877654221 11 245689999999998531 0168999999999998 8999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC-C---------ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQE-N---------VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG 357 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~-~---------~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G 357 (434)
+.+++++|.++|++||+++|+|+++.. . .+.+. +...+...+. ...+ +++.|+||.+ |++
T Consensus 202 ~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~----~~~~~~~~~~-~~~d---~~~~s~sK~~-g~~- 271 (467)
T 2oqx_A 202 SLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDW----TIEQITRETY-KYAD---MLAMSAKKDA-MVP- 271 (467)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTS----CHHHHHHHHG-GGCS---EEEEESSSTT-CCS-
T ss_pred CHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCc----cHHHHhhhhh-ccCC---eEEEeccccc-CCC-
Confidence 999999999999999999999966543 1 22221 2222211100 0123 3478999998 655
Q ss_pred ceeEEEEEecCCHH-HHHHHHHHhh----c-----ccCCchHHHHHHHHHcCCCCCC-hHHHHHHHHHHHHHHHHHHHH
Q 013892 358 KRGGYMEVTGFSAE-VREQIYKVAS----V-----NLCSNISGQILASLVMSPPKVG-DESYESYCAERDGILSSLARR 425 (434)
Q Consensus 358 ~R~G~~~~~~~~~~-~~~~l~~~~~----~-----~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~r~~l~~~L~~~ 425 (434)
-+||++. +++ +++.+.++.. . ....+..+..+....+. +.+ ++..+...++++.+.+.|++.
T Consensus 272 -~Gg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (467)
T 2oqx_A 272 -MGGLLCM---KDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY--DGMNLDWLAYRIAQVQYLVDGLEEI 344 (467)
T ss_dssp -SCEEEEE---CSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CceEEEe---cChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH--hhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 1377765 444 4433333221 0 11122222222222221 112 234556667778888888764
No 193
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=7.9e-21 Score=190.65 Aligned_cols=252 Identities=12% Similarity=0.045 Sum_probs=150.7
Q ss_pred CHHHHHHHHHHHHcCCCCCC--CCCCCCcchHHHHHHHH-HHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 141 SADSIERAWQILDQIPGRAT--GAYSHSQGIKGLRDTIA-AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~--~~Y~~~~G~~~lr~~ia-~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
|+.+++++.+.+.+....+. ..|.......+..+.++ +.+.+.+|. +. ..++++|+++++..++..++ ++||+
T Consensus 45 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~-~~v~~~~Gs~a~~~al~~~~-~~gd~ 120 (425)
T 3ecd_A 45 SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNA--GH-ANVQPHSGAQANGAVMLALA-KPGDT 120 (425)
T ss_dssp CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTC--SE-EECCCSSHHHHHHHHHHHHC-CTTCE
T ss_pred CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCC--CC-ceeecCchHHHHHHHHHHcc-CCCCE
Confidence 78899888877643210000 11111111112333333 445444452 22 23458888899999999997 79999
Q ss_pred EEEcCCCChh---HHHHHHHcCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHH
Q 013892 218 ILCPIPQYPL---YSASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (434)
Q Consensus 218 Vlv~~p~y~~---~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l 292 (434)
|+++.|+|+. +.......|. ++++++.+. ++|.+|+++|++++++. ++++|++++|+||+ ..+ +
T Consensus 121 Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~~---l 189 (425)
T 3ecd_A 121 VLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQH-----KPSLIIAGFSAYPR--KLD---F 189 (425)
T ss_dssp EEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCSEEEEECSCCCS--CCC---H
T ss_pred EEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhc-----CCcEEEEccccCCC--cCC---H
Confidence 9999999987 3333334454 555666553 35799999999999753 78999999999975 333 7
Q ss_pred HHHHHHHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHH
Q 013892 293 RAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAE 371 (434)
Q Consensus 293 ~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~ 371 (434)
++|.++|+++|+++|+||+|. ++.+.+. ..... .. .+ |++.|+||.| +|.|+||+++ .+++
T Consensus 190 ~~i~~l~~~~~~~li~De~~~~g~~~~~~--~~~~~---~~-----~d---i~~~s~sK~l---~g~~~g~~~~--~~~~ 251 (425)
T 3ecd_A 190 ARFRAIADSVGAKLMVDMAHIAGVIAAGR--HANPV---EH-----AH---VVTSTTHKTL---RGPRGGFVLT--NDEE 251 (425)
T ss_dssp HHHHHHHHHHTCEEEEECGGGHHHHHTTS--SCCGG---GT-----CS---EEEEESSGGG---CCCSCEEEEE--SCHH
T ss_pred HHHHHHHHHcCCEEEEECcChHhhhhccc--ccCch---hc-----Cc---EEEecCCccc---CCCCcEEEEe--CCHH
Confidence 899999999999999999954 3333332 11111 11 23 7899999987 4889999976 2467
Q ss_pred HHHHHHHHhhc--ccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 372 VREQIYKVASV--NLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 372 ~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+.+.+...... ...++...+.++...+.. .++.++..++++++++.+.+.|++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 252 IAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp HHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 87777665432 223444333333333221 1234566777778888888877763
No 194
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.86 E-value=6.1e-21 Score=192.82 Aligned_cols=256 Identities=13% Similarity=0.003 Sum_probs=172.3
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
..||+..+ +.+ .++.+++++.+.+.... ...|. .++++++++.+.+.++ .+++|++|+|+++++
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~---~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA~ 125 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGW---LYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEAT 125 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS---CCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHHH
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCC---CCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence 45666554 122 58899999999887631 22332 2334444444444333 468999999999999
Q ss_pred HHHHHH---HhcCCCCEEEEcCCCChhHHHHHH--------------HcCC------eEEEEecCCCCCCCCCHHHHHHH
Q 013892 204 HMMMQL---LIRSENDGILCPIPQYPLYSASIA--------------LHGG------TLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 204 ~~~l~~---l~~~~gd~Vlv~~p~y~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
..+++. +. ++++|++.+|+|+.+...+. ..|+ .++.++. .|+++|++.
T Consensus 126 ~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 126 MTAIRLARGYT--GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHH--CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHhh--CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 999987 54 56889999999987543221 1232 2455543 279999999
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCC
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKD 339 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~ 339 (434)
+++.. .++++|+++..+||||.++ +.+.+++|.++|++||+++|+||+|.++ ..+. ...+ ..++ ..+|
T Consensus 197 l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~--~~~~----~~~~-~~~d 265 (434)
T 2epj_A 197 FAEYG---DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL--EGAQ----GYFN-IEGD 265 (434)
T ss_dssp HHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST--THHH----HHHT-CCCS
T ss_pred HHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc--chhh----HHhC-CCCC
Confidence 97531 1455554444467899876 6999999999999999999999999986 3222 1111 1111 2355
Q ss_pred ceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHH
Q 013892 340 ISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAER 415 (434)
Q Consensus 340 ~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r 415 (434)
+ .||||.+ |. |+|+||+++ ++++++.+... ...+.+.+++++.++...++..+. ++..+++++++
T Consensus 266 --i---~s~sK~l-~~-G~~~G~v~~---~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~-~~~~~~~~~~~ 334 (434)
T 2epj_A 266 --I---IVLGKII-GG-GFPVGAVAG---SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE-EPVYSVSREAA 334 (434)
T ss_dssp --E---EEEEGGG-GT-TSSCEEEEE---CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-SCHHHHHHHHH
T ss_pred --e---eeecchh-cC-Ccceeeeee---cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence 2 3889999 54 999999987 88888877652 123446788888887777653211 35678888889
Q ss_pred HHHHHHHHHHH
Q 013892 416 DGILSSLARRA 426 (434)
Q Consensus 416 ~~l~~~L~~~~ 426 (434)
+.+.+.|++..
T Consensus 335 ~~l~~~L~~~~ 345 (434)
T 2epj_A 335 KALEEAASEVL 345 (434)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998888764
No 195
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.86 E-value=9.9e-21 Score=190.33 Aligned_cols=209 Identities=17% Similarity=0.138 Sum_probs=155.6
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~ 244 (434)
..++++.+|+++ | .+++++++|+++++..++..++ ++||+|+++.|.|......+ +..|+++..++.
T Consensus 84 ~~~le~~lA~l~----g----~~~~i~~ssGt~Ai~~al~~l~-~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 84 HFSLQQAMCELE----G----GAGCVLFPCGAAAVANSILAFI-EQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTC-CTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred HHHHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 667888888886 3 2357777888999999999888 79999999999999877654 356999998864
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEccCCCCCccCCCCC
Q 013892 245 DEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK--EGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 245 ~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~--~~~~li~Deay~~~~~~~~~~ 322 (434)
+ |+++|++++++ ++++|++++|+||||.+.+ +++|+++|++ +|+++|+|++|...++.. +
T Consensus 155 ~-------d~~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~~--p 216 (415)
T 2fq6_A 155 L-------IGADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLFK--A 216 (415)
T ss_dssp T-------CGGGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSSC--G
T ss_pred C-------CHHHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccCC--c
Confidence 3 78889888876 7999999999999999998 8999999999 999999999998753321 1
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCC
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSP 400 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~ 400 (434)
+ .++ .| ++++|++|.+ |.+|.+ +||+++ ++++++.+..... .....++...+++...++
T Consensus 217 ---~-----~~g---~D---iv~~S~sK~l-g~~g~~~~G~l~~---~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~- 277 (415)
T 2fq6_A 217 ---L-----DFG---ID---VSIQAATKYL-VGHSDAMIGTAVC---NARCWEQLRENAYLMGQMVDADTAYITSRGLR- 277 (415)
T ss_dssp ---G-----GGT---CS---EEEEETTTTT-TCSSSCCCEEEEE---CTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH-
T ss_pred ---c-----ccC---Ce---EEEEeCcccc-CCCCCceEEEEEe---CHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh-
Confidence 1 111 23 8899999999 557754 699876 6677787776554 333445554444433332
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+...+++..++...+.+.|+++
T Consensus 278 --~l~~r~~~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 278 --TLGVRLRQHHESSLKVAEWLAEH 300 (415)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHHHHHHHHHcC
Confidence 22345566667777777777654
No 196
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.86 E-value=7.8e-21 Score=193.25 Aligned_cols=254 Identities=10% Similarity=-0.032 Sum_probs=180.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC---CCEEEcCChHHHHHHHHHHHhcC---
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP---NDIFLTDGASPAVHMMMQLLIRS--- 213 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~l~~l~~~--- 213 (434)
.++.+.+.+.+.+... ...|....|..++++++++++.+.+|.+.+. ..+++|+|+++++.+++.++. +
T Consensus 54 ~~~~v~e~~~~a~~~~----~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~-~~~~ 128 (452)
T 2dgk_A 54 DDENVHKLMDLSINKN----WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK-WRWR 128 (452)
T ss_dssp CCHHHHHHHHHTTTCB----TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH-HHHH
T ss_pred chHHHHHHHHHHhccC----CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH-HHHH
Confidence 4566777776666542 3456667788999999999999988865332 249999999999999988875 2
Q ss_pred -----CC-----CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 214 -----EN-----DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 214 -----~g-----d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
+| ++|+++. +|..|...++..|++++.+++++ ++|.+|+++|+++|++ ++++|++++|+|||
T Consensus 129 ~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~t 200 (452)
T 2dgk_A 129 KRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDE------NTIGVVPTFGVTYT 200 (452)
T ss_dssp HHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCT------TEEEEECBBSCTTT
T ss_pred HHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhh------CCEEEEEEcCCcCC
Confidence 44 5999999 99999999999999999999875 3579999999999976 78999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHc------CCEEEEccCCCCCcc---CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCC
Q 013892 284 GQVLAEENQRAIVDFCKKE------GLVLLADEVYQENVY---VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYG 354 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~------~~~li~Deay~~~~~---~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g 354 (434)
|.+.+ +++|.++|+++ |+++++|++|..++. .+..+ ..+ ..+++. +++.|++| | +
T Consensus 201 G~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~---------~~~~~d-~~~~~~hK-~-~ 264 (452)
T 2dgk_A 201 GNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV-WDF---------RLPRVK-SISASGHK-F-G 264 (452)
T ss_dssp CBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-CST---------TSTTEE-EEEEETTT-T-T
T ss_pred cccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch-hhc---------CCCCCc-EEEECccc-c-c
Confidence 99987 88899999995 999999999998653 22100 010 012332 45678899 5 5
Q ss_pred CCCceeEEEEEecCCHHHH-HHHHHHhh-c---------cc---CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHH
Q 013892 355 ECGKRGGYMEVTGFSAEVR-EQIYKVAS-V---------NL---CSNISGQILASLVMSPPKVGDESYESYCAERDGILS 420 (434)
Q Consensus 355 ~~G~R~G~~~~~~~~~~~~-~~l~~~~~-~---------~~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~ 420 (434)
+.|+++||+++ .+++.+ +.+..... . .. ....+.++++...+.. +.+++..+++.++++.+.+
T Consensus 265 ~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~-~g~~~~~~~~~~~a~~l~~ 341 (452)
T 2dgk_A 265 LAPLGCGWVIW--RDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGR-EGYTKVQNASYQVAAYLAD 341 (452)
T ss_dssp CCCSSCEEEEE--SSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEE--cCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHH
Confidence 68999999986 234332 33311100 0 00 1134455555444421 2245667777777888877
Q ss_pred HHHHH
Q 013892 421 SLARR 425 (434)
Q Consensus 421 ~L~~~ 425 (434)
.|++.
T Consensus 342 ~L~~~ 346 (452)
T 2dgk_A 342 EIAKL 346 (452)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 77654
No 197
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.86 E-value=9.9e-21 Score=193.61 Aligned_cols=273 Identities=16% Similarity=0.130 Sum_probs=184.5
Q ss_pred CCCccccccc----CC-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET----QG-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~----~~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+|||..+ +. ..++.+++++.++++... ..|....+..+.+.++++.+.+..+ .+.++|++++|+++
T Consensus 54 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~----~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGse 127 (472)
T 3hmu_A 54 GEEILDAMAGLWCVNIGYGRDELAEVAARQMRELP----YYNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSE 127 (472)
T ss_dssp CCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCS----CCCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc----ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHH
Confidence 3456787766 22 348999999999988742 2344444455667777777766654 45679999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEEcCCCChhHHHHHHHcCC------------eEEEEecCC--C-CCCCCC------
Q 013892 202 AVHMMMQLLIR-------SENDGILCPIPQYPLYSASIALHGG------------TLVPYYLDE--A-TGWGLE------ 253 (434)
Q Consensus 202 al~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------ 253 (434)
++..+++.+.. .++++|++.+|+|..+.......+. .+..++... . +++ .|
T Consensus 128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~ 206 (472)
T 3hmu_A 128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL 206 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence 99999998862 1468999999999987766555443 233443221 0 111 34
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVS 330 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~ 330 (434)
+++|++.+++... .++.+|+++.++|++|.+. +++.+++|.++|+++|+++|+||+|.++...+. +..+.
T Consensus 207 ~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~--~~a~~--- 279 (472)
T 3hmu_A 207 ARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN--WFGTQ--- 279 (472)
T ss_dssp HHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SCHHH---
T ss_pred HHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc--cchhH---
Confidence 7888888864311 1455555555577777755 888999999999999999999999999655543 22221
Q ss_pred hhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH---hhcccCCchHHHHHHHHHcCCCCCChHH
Q 013892 331 RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV---ASVNLCSNISGQILASLVMSPPKVGDES 407 (434)
Q Consensus 331 ~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 407 (434)
..+ ..+| ++ +|||++ |-.|+|+||+++ ++++++.+... ...+++.++++++++...|+..+. ++.
T Consensus 280 -~~~-v~pd--i~---t~sK~l-~gg~~plG~v~~---~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~-~~~ 347 (472)
T 3hmu_A 280 -TMG-IRPH--IM---TIAKGL-SSGYAPIGGSIV---CDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE-ENI 347 (472)
T ss_dssp -HHT-CCCS--EE---EECGGG-TTTSSCCEEEEE---EHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH-TTH
T ss_pred -HhC-CCCc--ee---eechhh-hcCCcceEEEEE---CHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH-hHH
Confidence 111 2356 22 689998 434499999988 89999988321 123567889999988887753111 245
Q ss_pred HHHHH-HHHHHHHHHHHHH
Q 013892 408 YESYC-AERDGILSSLARR 425 (434)
Q Consensus 408 ~~~~~-~~r~~l~~~L~~~ 425 (434)
.++.+ ++.+.+++.|+++
T Consensus 348 ~~~~~~~~~~~l~~~L~~l 366 (472)
T 3hmu_A 348 LDHVRNVAAPYLKEKWEAL 366 (472)
T ss_dssp HHHHHHTHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 66777 7777777777554
No 198
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.86 E-value=2.3e-21 Score=194.33 Aligned_cols=252 Identities=12% Similarity=0.085 Sum_probs=159.3
Q ss_pred CCHHHHHHHHHHHHcCCC---CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCC
Q 013892 140 FSADSIERAWQILDQIPG---RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEND 216 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd 216 (434)
.|+.+++++.+.+.+... .....|........+.+.+.+++.+.+| +++++|++++| ++++..++..++ ++||
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~-~~gd 117 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALL-QPGD 117 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHC-CTTC
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhc-CCCC
Confidence 378899988877744210 0111233333334455544456655556 35666767776 789999999998 7999
Q ss_pred EEEEcCCCChhHH---HHHHH--cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHH
Q 013892 217 GILCPIPQYPLYS---ASIAL--HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEEN 291 (434)
Q Consensus 217 ~Vlv~~p~y~~~~---~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~ 291 (434)
+|+++.|+|..+. ..+.. .+...++++.+ .++.+|+++|++++++. ++++|++++|+||+ ..+
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~--~~~--- 185 (420)
T 3gbx_A 118 TVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH-----KPKMIIGGFSAYSG--VVD--- 185 (420)
T ss_dssp EEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH-----CCSEEEECCTTCCS--CCC---
T ss_pred EEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc-----CCeEEEEecCccCC--ccC---
Confidence 9999999998743 22222 34566666665 45689999999999874 68999999999975 555
Q ss_pred HHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-
Q 013892 292 QRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA- 370 (434)
Q Consensus 292 l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~- 370 (434)
+++|.++|++||+++|+||+|....+.... +... +. ..+ |++.|+||.| + |.++||+++ ++
T Consensus 186 l~~l~~l~~~~~~~li~De~~~~~~~~~~~-~~~~------~~--~~d---i~~~s~sK~~-~--g~~gg~~~~---~~~ 247 (420)
T 3gbx_A 186 WAKMREIADSIGAYLFVDMAHVAGLIAAGV-YPNP------VP--HAH---VVTTTTHKTL-A--GPRGGLILA---KGG 247 (420)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTHHHHHTTS-SCCS------TT--TSS---EEEEESSGGG-C--SCSCEEEEE---SSC
T ss_pred HHHHHHHHHHcCCEEEEECCcchhceeccc-CCcc------cc--cCC---EEEeecccCC-C--CCCceEEEE---cCC
Confidence 889999999999999999998644332221 1111 01 123 8899999988 3 777899987 54
Q ss_pred --HHHHHHHHHhhc--ccCCchHHHHHHHHHcC-C-CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 371 --EVREQIYKVASV--NLCSNISGQILASLVMS-P-PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 371 --~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~-~-~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++++.+...... ...++...+.++...+. . .++.++.++++.++++.+.+.|++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (420)
T 3gbx_A 248 DEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR 308 (420)
T ss_dssp CHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777654432 22444444444333332 1 2334567788888888888888763
No 199
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.86 E-value=3.7e-20 Score=185.36 Aligned_cols=210 Identities=17% Similarity=0.143 Sum_probs=156.0
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-----HHcCCeEEEEe
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI-----ALHGGTLVPYY 243 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~-----~~~g~~~~~~~ 243 (434)
..+|++.++++. | .+++++++++++|+..+ ..++ .+||+|+++.|+|......+ +..|++++.++
T Consensus 69 ~~~l~~~la~l~----g----~~~~~~~~sG~~Ai~~~-~~l~-~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 69 RFAYERCVAALE----G----GTRAFAFASGMAATSTV-MELL-DAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHH-HTTS-CTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHh----C----CCCEEEecCHHHHHHHH-HHHc-CCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 567777777765 3 23566666679999984 4566 79999999999999655543 34699999987
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCc
Q 013892 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (434)
Q Consensus 244 ~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 323 (434)
.+ |+++|++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....+... .
T Consensus 139 ~~-------d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~--~ 200 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRA------DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRP--L 200 (400)
T ss_dssp TT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCG--G
T ss_pred CC-------CHHHHHHHhcc------CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCCh--h
Confidence 64 78999998876 7999999999999999998 99999999999999999999986433321 0
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEE-EEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCC
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGY-MEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPP 401 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~-~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~ 401 (434)
.++ .+ ++++|+||.+ |-+|.++|. +++. .++++++.+..... ...+.++..++++...++.
T Consensus 201 --------~~g---~d---iv~~S~sK~l-~g~g~~~gG~~vv~-~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~- 263 (400)
T 3nmy_A 201 --------SLG---AD---LVVHSATKYL-NGHSDMVGGIAVVG-DNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT- 263 (400)
T ss_dssp --------GGT---CS---EEEEETTTTT-TCSSSCCCEEEEEC-SCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-
T ss_pred --------hcC---Cc---EEEecCcccc-CCCCCcceeEEEEe-CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-
Confidence 111 23 8899999999 447777766 4333 38889888877665 4556677777766666643
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 402 KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 402 ~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
+....++..++...+.+.|+++
T Consensus 264 --l~~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 264 --LPLRMRAHCENALALAQWLETH 285 (400)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 3455666777777777777653
No 200
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.85 E-value=1.2e-20 Score=189.97 Aligned_cols=255 Identities=15% Similarity=0.088 Sum_probs=175.3
Q ss_pred Cccccccc----CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHH
Q 013892 129 SILDRSET----QGL-FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAV 203 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 203 (434)
.++||..+ ..+ .|+.+++++.+.++... ...| ..++++++++++.+.++ .+++|++++|+++++
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~ 121 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGL---TFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEAT 121 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS---CCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC---CCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence 35676654 222 58899999999887621 2223 33456666666666553 578999999999999
Q ss_pred HHHHHH---HhcCCCCEEEEcCCCChhHHHHHHH--------------cCC------eEEEEecCCCCCCCCCHHHHHHH
Q 013892 204 HMMMQL---LIRSENDGILCPIPQYPLYSASIAL--------------HGG------TLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 204 ~~~l~~---l~~~~gd~Vlv~~p~y~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
..+++. +. +++.|++.+|+|+.+...+.. .|. .++.++. .|+++|++.
T Consensus 122 ~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 122 MSALRLARGYT--GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHH--CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHhh--CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 999886 54 468899999999876543211 121 2444442 389999999
Q ss_pred HHHHHhcCCCeeEEEEecCCCC-CccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 261 LEAAKAKGITVRALVVINPGNP-TGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NP-tG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
+++.. .++ ++++++|+|+ ||.++ +++++++|.++ ++||+++|+||+|.++ ..+. ... ...++ ..+
T Consensus 193 l~~~~---~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~--~~~----~~~~~-~~~ 259 (424)
T 2e7u_A 193 LKRRG---EEI-AAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAF--GGA----TELLG-LKP 259 (424)
T ss_dssp HHHHG---GGE-EEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSST--THH----HHHHT-CCC
T ss_pred HHhCC---CCE-EEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccch--hHH----HHHhC-CCc
Confidence 87521 134 4556677655 89765 78999999999 9999999999999986 3322 111 11111 235
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAE 414 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 414 (434)
| + .||||.| | .|+|+||+++ ++++++.+... ...+.+.+++++.++...++..+..++..++++++
T Consensus 260 d--i---~s~sK~l-~-~G~~~G~~~~---~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~ 329 (424)
T 2e7u_A 260 D--L---VTLGKIL-G-GGLPAAAYAG---RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDL 329 (424)
T ss_dssp S--E---EEECGGG-G-TTSSCEEEEE---CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHH
T ss_pred c--h---hhhhhhh-h-CCcceEEEEE---cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 5 2 2899999 5 5999999987 88888877652 12344778888888877775322224678888889
Q ss_pred HHHHHHHHHHHH
Q 013892 415 RDGILSSLARRA 426 (434)
Q Consensus 415 r~~l~~~L~~~~ 426 (434)
++.+.+.|++..
T Consensus 330 ~~~l~~~L~~~~ 341 (424)
T 2e7u_A 330 GARLEAGLKEVL 341 (424)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999888764
No 201
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.85 E-value=1.4e-20 Score=187.78 Aligned_cols=252 Identities=11% Similarity=0.071 Sum_probs=164.7
Q ss_pred CHHHHHHHHHHHHcCCCCC---CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCE
Q 013892 141 SADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDG 217 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~ 217 (434)
|+.+++++.+.+.+....+ ...|.......++++.+.+++.+.+|. +++.|++++| ++++..++..++ ++||+
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~--~~~~i~~~sG-t~a~~~a~~~~~-~~gd~ 111 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHANVQPHSG-AQANMAVYFTVL-EHGDT 111 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHHHHHHHHHC-CTTCE
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceEEEecCc-HHHHHHHHHHhc-CCCCE
Confidence 7778888877775321000 011222223455665444444444453 3444555666 999999999997 79999
Q ss_pred EEEcCCCChhHHH-H--HHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHH
Q 013892 218 ILCPIPQYPLYSA-S--IALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQ 292 (434)
Q Consensus 218 Vlv~~p~y~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l 292 (434)
|+++.|+|+.+.. . +...| .+++.+++++ .++.+|+++|++++++. ++++|++ +|+|+ |...+ +
T Consensus 112 Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~~~v~~-~~~~~-~~~~~---l 180 (405)
T 2vi8_A 112 VLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLH-----RPKLIVA-AAAAY-PRIID---F 180 (405)
T ss_dssp EEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSC-CSCCC---H
T ss_pred EEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhc-----CCeEEEE-eCCCC-CccCC---H
Confidence 9999999987743 1 12333 4788887753 35789999999999864 5777776 55553 45545 8
Q ss_pred HHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH
Q 013892 293 RAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV 372 (434)
Q Consensus 293 ~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~ 372 (434)
++|.++|+++|+++|+||+|....+.... ... . +. ..| +++.|+||.|+|.+| ||+++ ++++
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~----~~--~~d---i~~~s~sK~~~g~~g---G~~~~---~~~~ 242 (405)
T 2vi8_A 181 AKFREIADEVGAYLMVDMAHIAGLVAAGL-HPN--P----VP--YAH---FVTTTTHKTLRGPRG---GMILC---QEQF 242 (405)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCC--S----TT--TCS---EEEEESSSTTCCCSC---EEEEE---CHHH
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCc-CCC--c----cc--cCC---EEEEeccccCCCCCC---eEEEE---cHHH
Confidence 99999999999999999999953332211 110 0 11 134 789999999953555 99987 7899
Q ss_pred HHHHHHHhh-cc-cCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 373 REQIYKVAS-VN-LCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 373 ~~~l~~~~~-~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
++.+..... .. ..++.....++...++. ..++++.+++++++++.+.+.|++.
T Consensus 243 ~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 299 (405)
T 2vi8_A 243 AKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE 299 (405)
T ss_dssp HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 988877653 22 23344444444444432 2245677888888888888888765
No 202
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.85 E-value=1.6e-20 Score=189.46 Aligned_cols=267 Identities=13% Similarity=0.060 Sum_probs=169.3
Q ss_pred CCCcccccccC----C-CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSETQ----G-LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~~----~-~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+. . ..++++++++.+.+.... ...|+ .....++++.++++ ++ .++++++|+|+++
T Consensus 52 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~---~~~~~-~~~~~~la~~l~~~----~~---~~~~v~~~~sGse 120 (429)
T 4e77_A 52 GKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGL---SFGAP-TEMEVKMAQLVTDL----VP---TMDMVRMVNSGTE 120 (429)
T ss_dssp CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS---CCSSC-CHHHHHHHHHHHHH----ST---TCSEEEEESSHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCc---ccCCC-CHHHHHHHHHHHhh----CC---CCCEEEEeCcHHH
Confidence 34567877662 2 258999999999887632 22343 33344555555554 33 4789999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHH-HcCCe--EEEEecCCCC---------CC-CCCHHHHHHHHHHHHhc
Q 013892 202 AVHMMMQLLIR-SENDGILCPIPQYPLYSASIA-LHGGT--LVPYYLDEAT---------GW-GLETSEVKKQLEAAKAK 267 (434)
Q Consensus 202 al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~-~~g~~--~~~~~~~~~~---------~~-~~d~~~l~~~l~~~~~~ 267 (434)
++..+++.... .+++.|++..+.|..+..... ..|.. ....+....- .+ ..|+++|++.+++.
T Consensus 121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--- 197 (429)
T 4e77_A 121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQY--- 197 (429)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHS---
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhc---
Confidence 99999985431 256899999999987665221 11111 1111110000 00 12899999998752
Q ss_pred CCCeeEEEEecCCCCCccCCC--HHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEE
Q 013892 268 GITVRALVVINPGNPTGQVLA--EENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSF 345 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~~~~--~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i 345 (434)
+.++ ++++++|+|++|.++. ++.+++|.++|++||+++|+||+|.++ ..+. .... ..++ ..+| +
T Consensus 198 ~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~--~~~~----~~~~-~~pd--i--- 263 (429)
T 4e77_A 198 PQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL--AGAQ----DYYH-VIPD--L--- 263 (429)
T ss_dssp TTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT--TCHH----HHTT-CCCS--E---
T ss_pred CCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc--chHH----HhcC-CCCC--e---
Confidence 1134 5566778766654433 456999999999999999999999986 3332 2111 1111 2355 2
Q ss_pred ecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHH
Q 013892 346 QSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSS 421 (434)
Q Consensus 346 ~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~ 421 (434)
.||||.| | +|+|+||+++ ++++++.+... ...+.+.+++++.++...++..+. ++.+++++++++.+++.
T Consensus 264 ~t~sK~~-~-~G~~~G~~~~---~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~ 337 (429)
T 4e77_A 264 TCLGKII-G-GGMPVGAFGG---RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGVYETLTELTDSLATG 337 (429)
T ss_dssp EEEEGGG-G-TTSCCEEEEE---CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHH
T ss_pred eeecccc-c-CCCCeEEEEE---CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHH
Confidence 3889999 5 7999999987 89998887653 234457888888888777753211 46778888888888888
Q ss_pred HHHHHH
Q 013892 422 LARRAK 427 (434)
Q Consensus 422 L~~~~~ 427 (434)
|++...
T Consensus 338 L~~~~~ 343 (429)
T 4e77_A 338 LRHAAK 343 (429)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877643
No 203
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.85 E-value=1.8e-19 Score=186.07 Aligned_cols=209 Identities=11% Similarity=0.044 Sum_probs=162.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC------------
Q 013892 146 ERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS------------ 213 (434)
Q Consensus 146 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~------------ 213 (434)
+.+...+.. ....|....+..++++++++|+.+.+|.+.+++.+++|+|+++++..++.++...
T Consensus 114 e~l~~~~~~----~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~ 189 (511)
T 3vp6_A 114 EWLTSTANT----NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAA 189 (511)
T ss_dssp HHHHHHHCC----CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGG
T ss_pred HHHHHHhcc----CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCccc
Confidence 344445443 2567888889999999999999999998766789999999999998888776521
Q ss_pred -CCCEEEEcCCCChhHHHHHHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH
Q 013892 214 -ENDGILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE 289 (434)
Q Consensus 214 -~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~ 289 (434)
+++.|+++.+.|..+...++..|+ +++.++.+. ++.+|+++|+++|++..++|..+++|++++|+||||.+-+
T Consensus 190 ~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~- 266 (511)
T 3vp6_A 190 VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP- 266 (511)
T ss_dssp SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC-
T ss_pred CCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc-
Confidence 567999999999999999999998 899999874 4799999999999987666666999999999999999966
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|+++|++||+++++|++|.......+. +. .....+. .-| +++.+.+|.| +.| ..+|++++ .+
T Consensus 267 --l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~-~~---~~~~g~~--~aD---sv~~~~hK~l-~~p-~g~g~l~~--~~ 331 (511)
T 3vp6_A 267 --IQEIADICEKYNLWLHVDAAWGGGLLMSRK-HR---HKLNGIE--RAN---SVTWNPHKMM-GVL-LQCSAILV--KE 331 (511)
T ss_dssp --HHHHHHHHHHHTCEEEEEETTGGGGGGCTT-TG---GGGTTGG--GCS---EEEECTTSTT-CCC-SCCEEEEE--SS
T ss_pred --HHHHHHHHHHcCCEEEEEccchhhHhhChh-hh---hhccCCc--cCC---EEEECccccc-CCC-cCeEEEEE--eC
Confidence 999999999999999999999986653321 11 1111111 123 5567999988 433 66788865 35
Q ss_pred HHHHHHH
Q 013892 370 AEVREQI 376 (434)
Q Consensus 370 ~~~~~~l 376 (434)
++++...
T Consensus 332 ~~~~~~~ 338 (511)
T 3vp6_A 332 KGILQGC 338 (511)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 204
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.84 E-value=1.6e-19 Score=186.16 Aligned_cols=246 Identities=11% Similarity=0.031 Sum_probs=176.1
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhc-------CCC-----C-EEEEcCCCCh
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-------SEN-----D-GILCPIPQYP 226 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~-------~~g-----d-~Vlv~~p~y~ 226 (434)
...|....+..++++.+.+++.+.+|.+.+.+++++|+|+++++..++..+.. .+| + .|+++.+.|+
T Consensus 121 ~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~ 200 (504)
T 2okj_A 121 MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHY 200 (504)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred CCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchH
Confidence 34677777778889999999988888665478999999999999999888741 145 6 7999999999
Q ss_pred hHHHHHHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 227 LYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 227 ~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
.+...++..|. +++.+++++ ++.+|+++|+++|++...+|.++++|++++|+||||.+.+ +++|.++|+++|
T Consensus 201 s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g 275 (504)
T 2okj_A 201 SIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYN 275 (504)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcC
Confidence 99999998887 899999864 5789999999999876666667899999999999999977 899999999999
Q ss_pred CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcc
Q 013892 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN 383 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~ 383 (434)
+++++|++|..+.+.... +.. .+..+. ..| +++.|++|.+ +. ..++|++++ .++++++........+
T Consensus 276 ~~lhvD~a~~~~~~~~~~-~~~---~~~g~~--~~D---~i~~~~hK~~-~~-p~~~g~l~~--~~~~~~~~~~~~~~~~ 342 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMSRK-HRH---KLNGIE--RAN---SVTWNPHKMM-GV-LLQCSAILV--KEKGILQGCNQMCAGY 342 (504)
T ss_dssp CEEEEEETTGGGGGGCTT-TGG---GGTTGG--GCS---EEEECTTSTT-CC-CSCCEEEEE--SSTTHHHHHHCCCCSS
T ss_pred CEEEEehhhhhHHHhCHh-hHh---hcCCcc--cCC---EEEECchhhc-CC-CcceEEEEE--ECHHHHHHHhcCCCcc
Confidence 999999999987664321 111 111111 134 5677899988 54 478999986 3445555432211111
Q ss_pred c----------------------CCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 384 L----------------------CSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 384 ~----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
. ....+.++++...+.. +.+++..++..+.++.+.+.|++
T Consensus 343 l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~ 404 (504)
T 2okj_A 343 LFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGT-VGFENQINKCLELAEYLYAKIKN 404 (504)
T ss_dssp SCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 0124555555444431 22344555666666666666654
No 205
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.84 E-value=1.1e-19 Score=186.57 Aligned_cols=262 Identities=11% Similarity=-0.018 Sum_probs=179.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCC-------CCCEEEcCChHHHHHHHHHHHhcC
Q 013892 141 SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-------PNDIFLTDGASPAVHMMMQLLIRS 213 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~l~~l~~~ 213 (434)
|..+.+.+...+.. ....|....+..++++++++++.+.+|.+.+ ..++++|+|+++++..++.++...
T Consensus 87 ~~~~~~~~~~~~n~----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 87 PAMLADMLCGAIGC----IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTK 162 (486)
T ss_dssp HHHHHHHHHHHHCC----CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc----CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHH
Confidence 33455555555532 2556777777899999999999999887632 356899999999998888765310
Q ss_pred --C------CC--------E--EEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE
Q 013892 214 --E------ND--------G--ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV 275 (434)
Q Consensus 214 --~------gd--------~--Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~ 275 (434)
+ || + |+++.++|..+...++..|++++.++++ .++.+|+++|+++|++..++|..+.+|+
T Consensus 163 ~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 1 32 3 8899999999999999999999999986 3679999999999988655554556899
Q ss_pred EecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCC
Q 013892 276 VINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGE 355 (434)
Q Consensus 276 l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~ 355 (434)
+++|+||||.+-+ +++|+++|+++|+++++|++|+.+.+..+. +... ...+. .-| .++.+++|.+ +.
T Consensus 241 ~~~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~-~~~~---~~g~~--~ad---si~~~~hK~~-~~ 307 (486)
T 1js3_A 241 ATLGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPE-FRHL---LNGVE--FAD---SFNFNPHKWL-LV 307 (486)
T ss_dssp EEBSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTT-TGGG---GTTGG--GCS---EEEECHHHHS-SC
T ss_pred EeCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHH-HHHH---hcCcc--ccC---eeEEchhhhc-CC
Confidence 9999999998866 999999999999999999999986553211 1111 11111 023 3456889988 54
Q ss_pred CCceeEEEEEecCCHHH-HHHHHHHh----h--c---------------ccCCchHHHHHHHHHcCCCCCChHHHHHHHH
Q 013892 356 CGKRGGYMEVTGFSAEV-REQIYKVA----S--V---------------NLCSNISGQILASLVMSPPKVGDESYESYCA 413 (434)
Q Consensus 356 ~G~R~G~~~~~~~~~~~-~~~l~~~~----~--~---------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 413 (434)
| +++||+++ .++.. .+.+.... . . ......+.++++...+. .+.+++..++..+
T Consensus 308 p-~~~G~l~~--~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-~~g~~~~~~~~~~ 383 (486)
T 1js3_A 308 N-FDCSAMWV--KRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-VKGLQAYIRKHVQ 383 (486)
T ss_dssp C-SSCEEEEE--SCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred C-cceEEEEE--eCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-HHHHHHHHHHHHH
Confidence 4 89999976 35553 33331100 0 0 00123455555544442 1234456666677
Q ss_pred HHHHHHHHHHHH
Q 013892 414 ERDGILSSLARR 425 (434)
Q Consensus 414 ~r~~l~~~L~~~ 425 (434)
+++.+.+.|++.
T Consensus 384 ~a~~l~~~L~~~ 395 (486)
T 1js3_A 384 LSHEFEAFVLQD 395 (486)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 777777777653
No 206
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.84 E-value=9.8e-20 Score=183.76 Aligned_cols=214 Identities=15% Similarity=0.129 Sum_probs=148.2
Q ss_pred cchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHcCCeEEEE
Q 013892 167 QGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA----SIALHGGTLVPY 242 (434)
Q Consensus 167 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~ 242 (434)
....+|++.+++++ | .+..++++++++++..++.+++ ++||+|+++.|+|..+.. .++..|++++.+
T Consensus 82 p~~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~al~-~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v 152 (430)
T 3ri6_A 82 PTVEDLEQRLKNLT----G----ALGVLALGSGMAAISTAILTLA-RAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV 152 (430)
T ss_dssp HHHHHHHHHHHHHH----T----CSEEEEESCHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHh-CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 44677888888876 3 2335555566799999999988 799999999999998877 667889999999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 243 YLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 243 ~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
+.+ |+++|++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+...
T Consensus 153 ~~~-------d~~~l~~ai~~------~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~~-- 214 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDE------TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLEA-- 214 (430)
T ss_dssp CTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCCG--
T ss_pred CCC-------CHHHHHHhhCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCCh--
Confidence 864 78999999876 7999999999999999998 88999999999999999999986544211
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH------------------HHHHHH-Hhh-c
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV------------------REQIYK-VAS-V 382 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~------------------~~~l~~-~~~-~ 382 (434)
..++ -+ ++++|+||.++ -+|..+|.+++.+.+..+ ++.+.. ... .
T Consensus 215 --------~~~g---~d---iv~~S~sK~l~-g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~ 279 (430)
T 3ri6_A 215 --------KRLG---VD---IEVLSSTKFIS-GGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNL 279 (430)
T ss_dssp --------GGGT---CS---EEEEECCCEEE-TTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHH
T ss_pred --------HHcC---CE---EEEECCccccc-CCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhc
Confidence 0111 23 88999999994 355545544443323222 233322 112 3
Q ss_pred ccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 383 NLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 383 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
....++...+++...+ +.+....++..++...+.+.|+++
T Consensus 280 g~~~~~~~a~l~l~~l---~~l~~r~~~~~~na~~la~~L~~~ 319 (430)
T 3ri6_A 280 GPSLSPHNAYLQSLGL---ETMALRIERSCQNAQELAHWLLSI 319 (430)
T ss_dssp CCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHhCC
Confidence 3344554444433333 223344556666666666666543
No 207
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.84 E-value=9e-19 Score=177.15 Aligned_cols=192 Identities=15% Similarity=0.123 Sum_probs=149.1
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH---------
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL--------- 210 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l--------- 210 (434)
+++++++++.+.+... .|.+..+..++++++++++ | . +++++++++++++..++.++
T Consensus 41 ~~~~~~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~----g--~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~ 106 (437)
T 3bb8_A 41 IGTKELQLMVEASLDG------WLTTGRFNDAFEKKLGEYL----G--V--PYVLTTTSGSSANLLALTALTSPKLGVRA 106 (437)
T ss_dssp CCHHHHHHHHHHHHHC------CCBSCHHHHHHHHHHHHHH----T--C--SEEEEESCHHHHHHHHHHHTTCGGGGGGS
T ss_pred CCHHHHHHHHHHHHcC------CcCCChHHHHHHHHHHHHH----C--C--CcEEEeCCHHHHHHHHHHHhhhccccccc
Confidence 4678899988887652 2556678999999999998 2 1 25777788889999999988
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec-CCCCCccCCCH
Q 013892 211 IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQVLAE 289 (434)
Q Consensus 211 ~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~-p~NPtG~~~~~ 289 (434)
+ ++||+|+++.|+|+.+...++..|++++.++++++ +|.+|+++|++++++ ++++|++++ |+|| .+
T Consensus 107 ~-~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~g~~----~~- 173 (437)
T 3bb8_A 107 L-KPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSD------KTKAIMIAHTLGNL----FD- 173 (437)
T ss_dssp C-CTTCEEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCT------TEEEEEEECGGGCC----CC-
T ss_pred C-CCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCC------CCeEEEEeCCCCCh----hc-
Confidence 5 68999999999999999999999999999998753 578999999998875 799999984 5665 34
Q ss_pred HHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCC
Q 013892 290 ENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFS 369 (434)
Q Consensus 290 ~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~ 369 (434)
+++|.++|+++|+++|+||+|......+.. .++ ...| +++.||+|++ +++|.|+||++. .+
T Consensus 174 --~~~i~~l~~~~~~~li~D~a~~~g~~~~~~----------~~~-~~~d---~~~~s~~~~k-~l~~g~gg~~~~--~~ 234 (437)
T 3bb8_A 174 --LAEVRRVADKYNLWLIEDCCDALGSTYDGK----------MAG-TFGD---IGTVSFYPAK-HITMGEGGAVFT--QS 234 (437)
T ss_dssp --HHHHHHHHHHHTCEEEEECTTCTTCEETTE----------ETT-SSSS---EEEEECSTTS-SSCCSSCEEEEE--SC
T ss_pred --HHHHHHHHHHcCCEEEEECccccCceECCe----------ecc-cccC---EEEEECcCCc-CCCCCCeEEEEe--CC
Confidence 899999999999999999999853222210 111 1134 6778998888 788999999976 23
Q ss_pred HHHHHHHH
Q 013892 370 AEVREQIY 377 (434)
Q Consensus 370 ~~~~~~l~ 377 (434)
+.+.+.+.
T Consensus 235 ~~~~~~~~ 242 (437)
T 3bb8_A 235 AELKSIIE 242 (437)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 208
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.83 E-value=3.8e-20 Score=188.10 Aligned_cols=266 Identities=12% Similarity=0.047 Sum_probs=172.0
Q ss_pred Cccccccc----CCC-CCHHHH-H-HHHH---HHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCC
Q 013892 129 SILDRSET----QGL-FSADSI-E-RAWQ---ILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDG 198 (434)
Q Consensus 129 ~~l~~~~~----~~~-~p~~v~-~-~~~~---~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 198 (434)
..+|+..+ +.+ .++.++ + ++.+ .+..... ....|.. ....++++.+++++ + ...+++|++|+|
T Consensus 55 ~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~-~~~~~~~-~~~~~la~~la~~~----~-~~~~~~v~~~~~ 127 (449)
T 2cjg_A 55 RYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKP-SNSDVYS-VAMARFVETFARVL----G-DPALPHLFFVEG 127 (449)
T ss_dssp EEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCC-CTTTCCC-HHHHHHHHHHHHHH----C-CTTCCEEEEESS
T ss_pred EEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCC-CCcccCC-HHHHHHHHHHHHhc----C-CCCCCEEEEeCc
Confidence 35666544 222 388999 8 8888 6665321 0112322 22345555555554 4 246789999999
Q ss_pred hHHHHHHHHHHHh---cC----------CCCEEEEcCCCChhHHHHHHH---------cCC-----eEEEEecCCCCCC-
Q 013892 199 ASPAVHMMMQLLI---RS----------ENDGILCPIPQYPLYSASIAL---------HGG-----TLVPYYLDEATGW- 250 (434)
Q Consensus 199 ~~~al~~~l~~l~---~~----------~gd~Vlv~~p~y~~~~~~~~~---------~g~-----~~~~~~~~~~~~~- 250 (434)
+++++..+++.+. .+ +||+|++.+|.|+++...... .+. .++.++.++....
T Consensus 128 gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 207 (449)
T 2cjg_A 128 GALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDE 207 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCH
T ss_pred hHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhc
Confidence 9999999987542 11 289999999999876443211 122 4555555431001
Q ss_pred -------CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 251 -------GLETSEVKKQLEAAKAKGITVRALVVINPGNPTG-QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 251 -------~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG-~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
..++++|++.+++. +.++++|+++.++|||| .+++++++++|.++|++||+++|+||+|.++.+.+.
T Consensus 208 ~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-- 282 (449)
T 2cjg_A 208 PAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT-- 282 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--
T ss_pred cccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc--
Confidence 13556688887631 12676665554479999 599999999999999999999999999998766543
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHH-----H-HhhcccCCchHHHHHHHH
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIY-----K-VASVNLCSNISGQILASL 396 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~-----~-~~~~~~~~~~~~q~~~~~ 396 (434)
+..+... . ..+| ++ ||||.| |+||+++ ++++++.+. . ....+.+.+++++.++..
T Consensus 283 ~~~~~~~--~---~~~d--i~---t~sK~l------~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~a 343 (449)
T 2cjg_A 283 AWAYQQL--D---VAPD--IV---AFGKKT------QVCGVMA---GRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARR 343 (449)
T ss_dssp SSTHHHH--T---CCCS--EE---EECGGG------SSEEEEE---CGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHH
T ss_pred ceeeccc--C---CCce--EE---EecCcc------cEEEEEE---CHHHhhhhhhcccCCcccccCCCCCHHHHHHHHH
Confidence 3222111 1 2245 22 789965 7999987 778877522 1 122455778999998877
Q ss_pred HcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 397 VMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 397 ~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.++..+. ++..++++++++.+.+.|++..
T Consensus 344 al~~~~~-~~~~~~~~~~~~~l~~~L~~l~ 372 (449)
T 2cjg_A 344 ILEVIEA-EGLFERAVQHGKYLRARLDELA 372 (449)
T ss_dssp HHHHHHH-HTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 7753111 3567888889999999988764
No 209
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.82 E-value=1.9e-19 Score=183.30 Aligned_cols=234 Identities=11% Similarity=0.094 Sum_probs=164.6
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH-HHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHcCCeEEEEecC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGAS-PAVHMMMQLLIRS--ENDGILCPIPQYPLYSASIALHGGTLVPYYLD 245 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~-~al~~~l~~l~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 245 (434)
..++.+.+.+++.+.+|.+ ++ +++|+|++ .++..++..+. . +++.|+++.+.|+.+...++..|++++.+++.
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~-~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 206 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAAR-KKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHH-HHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHH-HhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence 5667777888888877754 34 99999999 45554555543 3 67889999999999999999999999998873
Q ss_pred C-CCCCCCCHHHHHHHH-HHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCc
Q 013892 246 E-ATGWGLETSEVKKQL-EAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKF 323 (434)
Q Consensus 246 ~-~~~~~~d~~~l~~~l-~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 323 (434)
. ++++.+|+++|+++| +... ++ ++.+|++++|+||||.+.+ +++|.++|+++|+++++|++|..+.++ +
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~-~~-~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g----~ 277 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIE-LG-NRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY----Y 277 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHH-TT-CCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH----H
T ss_pred ccCCCCCcCHHHHHHHHHHHhh-CC-CeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH----h
Confidence 2 345789999999999 4311 11 6778888999999999988 899999999999999999999875442 1
Q ss_pred cchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhhcc-cCCchHHHHHHHHHcCCCC
Q 013892 324 HSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVASVN-LCSNISGQILASLVMSPPK 402 (434)
Q Consensus 324 ~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~q~~~~~~l~~~~ 402 (434)
.. .....+.. ..| +++.|++|.+. .+.++||+++ .++++++.+......+ ...+.+.+.++...+.. +
T Consensus 278 ~~--~~~~~~~~-~~D---~~~~s~hK~~~--~p~g~G~l~~--~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~~-~ 346 (456)
T 2z67_A 278 LE--KLKKAFKY-RVD---AVVSSSDKNLL--TPIGGGLVYS--TDAEFIKEISLSYPGRASATPVVNTLVSLLSMGS-K 346 (456)
T ss_dssp HH--HHHHHHTS-CCS---EEEEEHHHHHC--CCSSCEEEEE--SCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHH-H
T ss_pred hH--HHHHhhCC-CCC---EEEEcCCCCcC--CCCCeEEEEE--cCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHHH-H
Confidence 11 11112211 244 56789999652 5799999976 4677877764322111 12234455555444421 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHH
Q 013892 403 VGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 403 ~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
.+++..++..+.++.+.+.|++..
T Consensus 347 ~~~~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 347 NYLELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 345667788888888888887763
No 210
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.82 E-value=3.2e-19 Score=183.76 Aligned_cols=256 Identities=10% Similarity=-0.006 Sum_probs=178.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEE---EcCChHHHHHHHHHHHhcCC-
Q 013892 139 LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIF---LTDGASPAVHMMMQLLIRSE- 214 (434)
Q Consensus 139 ~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~---~t~G~~~al~~~l~~l~~~~- 214 (434)
.+++.+.+++.+.+... ...|....+..++++.+.+++.+.+|.+.++++++ +|+|+++++.+++.++. .+
T Consensus 67 ~~~~~v~~~l~~~~~~~----~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~-~~~ 141 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKN----YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK-RKW 141 (502)
T ss_dssp CCCHHHHHHHHHTTTCB----TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH-HHH
T ss_pred CCCHHHHHHHHHHhccC----CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH-HHH
Confidence 45777887777766542 33345556688899999999999999775566554 48999999999988876 33
Q ss_pred -------CC-----EEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCC
Q 013892 215 -------ND-----GILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNP 282 (434)
Q Consensus 215 -------gd-----~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NP 282 (434)
|+ .|+++.++|..+...++..|++++.+++++ ++|.+|+++|++++++ ++++|++++|+||
T Consensus 142 ~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~ 214 (502)
T 3hbx_A 142 QNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDE------NTICVAAILGSTL 214 (502)
T ss_dssp HHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCT------TEEEEEEEBSCTT
T ss_pred hHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhh------CCEEEEEecCCCC
Confidence 66 999999999999999999999999999875 3478999999999987 7999999999999
Q ss_pred CccCCCHHHHHHHHHHHHHc------CCEEEEccCCCCCcc---CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 283 TGQVLAEENQRAIVDFCKKE------GLVLLADEVYQENVY---VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 283 tG~~~~~~~l~~i~~~~~~~------~~~li~Deay~~~~~---~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
||.+.+ +++|.++|+++ |+++++|++|.+++. .+..+ ..+ . ..++. ++..|.+|.+
T Consensus 215 tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~-~~~-------~--~~~~D-~v~~s~hK~l- 279 (502)
T 3hbx_A 215 NGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDF-------R--LPLVK-SINVSGHKYG- 279 (502)
T ss_dssp TCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-CST-------T--STTEE-EEEEETTTTT-
T ss_pred CCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc-ccc-------C--CCCce-EEEECccccc-
Confidence 999988 88889999998 999999999997542 22111 111 0 12322 5667889965
Q ss_pred CCCCceeEEEEEecCCHHHHHHHHHHhhcc-----------cC---CchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHH
Q 013892 354 GECGKRGGYMEVTGFSAEVREQIYKVASVN-----------LC---SNISGQILASLVMSPPKVGDESYESYCAERDGIL 419 (434)
Q Consensus 354 g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~-----------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~ 419 (434)
+.+.++||+++ .+++.+.........+ .. ...++++++...+.. +.+.+..++..+.++.+.
T Consensus 280 -~~p~g~G~~~~--~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-~g~~~~~~~~~~~a~~l~ 355 (502)
T 3hbx_A 280 -LVYAGIGWVIW--RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-EGYRNVMENCRENMIVLR 355 (502)
T ss_dssp -CCCSSCEEEEE--SSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCeEEEEE--eCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 36788999876 3444432211111011 11 133445444443322 112455566666666777
Q ss_pred HHHHHH
Q 013892 420 SSLARR 425 (434)
Q Consensus 420 ~~L~~~ 425 (434)
+.|+++
T Consensus 356 ~~L~~~ 361 (502)
T 3hbx_A 356 EGLEKT 361 (502)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 776654
No 211
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.81 E-value=1.4e-19 Score=180.73 Aligned_cols=250 Identities=13% Similarity=0.107 Sum_probs=161.3
Q ss_pred CCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEE-cCChHHHHHHH
Q 013892 128 PSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFL-TDGASPAVHMM 206 (434)
Q Consensus 128 p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~-t~G~~~al~~~ 206 (434)
|..++++.++..+|+.+++++.+...... ....|.+ ...++.+.+.+.+.+.+|.+ ++++|++ |+|+++++..+
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~al~~~ 113 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTTAAALF--GTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAFWDAA 113 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTTTTTTT--TSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHHHHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhcCCCcc--CcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHHHHHH
Confidence 34566666677789999888755210100 0112221 22344555555555556754 4578998 99999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChh-HHHHHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 207 MQLLIRSENDGILCPIPQYPL-YSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 207 l~~l~~~~gd~Vlv~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
++.++ ++| .+.+..+.|.. ....+... |++++.++++. ++..+.+ +++ ++++|++++|+|||
T Consensus 114 ~~~l~-~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--g~~~~~~-----i~~------~~~~v~~~~~~npt 178 (398)
T 2fyf_A 114 AFGLI-DKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDP--GSAPEPQ-----TDP------SVDVIAWAHNETST 178 (398)
T ss_dssp HHHTC-SSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCT--TCCCCCC-----CCT------TCSEEEEESEETTT
T ss_pred HHHhc-CCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCC--CCCCCcc-----ccC------CCCEEEEeCcCCCc
Confidence 99997 676 23333444422 12245555 88888888762 3333321 222 78999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEE
Q 013892 284 GQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 363 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~ 363 (434)
|.+++.+++.++ +|+++|+||+|..+... ..+ .. .+ +++.|+||.| |.+| ++||+
T Consensus 179 G~~~~~~~i~~~------~~~~vivD~a~~~~~~~-----~~~----~~-----~d---i~~~s~sK~~-~~~g-g~g~l 233 (398)
T 2fyf_A 179 GVAVAVRRPEGS------DDALVVIDATSGAGGLP-----VDI----AE-----TD---AYYFAPQKNF-ASDG-GLWLA 233 (398)
T ss_dssp TEECCCCCCTTC------C-CEEEEECTTTTTTSC-----CCG----GG-----CS---EEEECTTSTT-CSCS-SEEEE
T ss_pred ceecchHHhhhh------cCCeEEEEeccccCCcc-----cCc----cc-----Cc---EEEEecCccc-CCCC-ceEEE
Confidence 999996665554 89999999999864321 111 11 23 6789999999 6665 59999
Q ss_pred EEecCCHHHHHHHHHHh----------------------hcccCCchHHHHHHHHHcCCC---CCChHHHHHHHHHHHHH
Q 013892 364 EVTGFSAEVREQIYKVA----------------------SVNLCSNISGQILASLVMSPP---KVGDESYESYCAERDGI 418 (434)
Q Consensus 364 ~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l 418 (434)
++ ++++++.+.+.. ....+++..++.++..+++.. ..+++.+++++++++.+
T Consensus 234 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l 310 (398)
T 2fyf_A 234 IM---SPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRL 310 (398)
T ss_dssp EE---CHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred EE---CHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 87 888888874321 123456677676666555421 11466778888888888
Q ss_pred HHHHHHH
Q 013892 419 LSSLARR 425 (434)
Q Consensus 419 ~~~L~~~ 425 (434)
.+.|++.
T Consensus 311 ~~~L~~~ 317 (398)
T 2fyf_A 311 YSWAQER 317 (398)
T ss_dssp HHHHHHS
T ss_pred HHHHHHc
Confidence 8888765
No 212
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.81 E-value=4e-18 Score=176.19 Aligned_cols=196 Identities=14% Similarity=0.154 Sum_probs=152.4
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHh-------cCCCC------EEEEcCCCCh
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------RSEND------GILCPIPQYP 226 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~-------~~~gd------~Vlv~~p~y~ 226 (434)
...|....+..++.+.+.+++.+.+|.+ ++++++|+|+++++..++..+. ..+|+ .|+++.+.|+
T Consensus 137 ~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~ 214 (515)
T 2jis_A 137 QYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHY 214 (515)
T ss_dssp TTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCT
T ss_pred CCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccH
Confidence 4467777778888888888888887854 6789999999999988888763 12465 8999999999
Q ss_pred hHHHHHHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 227 LYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 227 ~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
.+...++..|. +++.+++++ ++.+|+++|+++|++...+|.++++|++++|+||||.+.+ +++|.++|+++|
T Consensus 215 s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g 289 (515)
T 2jis_A 215 SIQKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHG 289 (515)
T ss_dssp HHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcC
Confidence 99999999888 899999864 4789999999999876666656899999999999999988 899999999999
Q ss_pred CEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH-HHHHH
Q 013892 304 LVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA-EVREQ 375 (434)
Q Consensus 304 ~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~-~~~~~ 375 (434)
+++++|++|..+.+..+. +. ..+..+. ..| +++.|++|.+ + .+.++|++++ .++ ++++.
T Consensus 290 ~~l~vD~a~~~~~~~~~~-~~---~~~~g~~--~aD---~v~~s~hK~l-~-~p~g~G~l~~--~~~~~~~~~ 349 (515)
T 2jis_A 290 LWLHVDAAWGGSVLLSQT-HR---HLLDGIQ--RAD---SVAWNPHKLL-A-AGLQCSALLL--QDTSNLLKR 349 (515)
T ss_dssp CEEEEEETTGGGGGGCTT-TG---GGGTTGG--GCS---EEEECTTSTT-C-CCSCCEEEEE--SCCSCHHHH
T ss_pred CeEEEehhhhhHHHhChh-hH---hhcCCCc--cCC---EEEECccccc-C-CCCCeeEEEE--eChHHHHHH
Confidence 999999999987764321 11 1111111 134 6788999988 4 2457899976 243 35554
No 213
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.81 E-value=1e-18 Score=175.98 Aligned_cols=156 Identities=18% Similarity=0.189 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEEE-e
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPY-Y 243 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~-~ 243 (434)
..++++.+++++ | .. +.+++++ +++++..++..++ .+||+|+++.++|..+...+ +..|++++.+ +
T Consensus 60 ~~~l~~~la~~~----g--~~-~~v~~~s-Gt~A~~~~l~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 130 (421)
T 2ctz_A 60 VDVLEKRLAALE----G--GK-AALATAS-GHAAQFLALTTLA-QAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR 130 (421)
T ss_dssp HHHHHHHHHHHH----T--CS-EEEEESS-HHHHHHHHHHHHC-CTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred HHHHHHHHHHHh----C--CC-ceEEecC-HHHHHHHHHHHHh-CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 578999999987 2 11 3455555 5999999999887 79999999999999877765 7789999988 6
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCC-CCCccCCCCC
Q 013892 244 LDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVY-QENVYVPEKK 322 (434)
Q Consensus 244 ~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~ 322 (434)
.+ |+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++| ... +... +
T Consensus 131 ~~-------d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~-~ 192 (421)
T 2ctz_A 131 EE-------RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR-P 192 (421)
T ss_dssp TC-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC-G
T ss_pred CC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC-c
Confidence 43 78999998876 7999999999999999999 899999999999999999999 532 3221 1
Q ss_pred ccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEe
Q 013892 323 FHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 366 (434)
Q Consensus 323 ~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~ 366 (434)
+ .++ .| +++.|++|.+ |.+|.|+|++++.
T Consensus 193 ---~-----~~~---~D---i~~~s~~K~l-~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 193 ---L-----AWG---AA---LVTHSLTKWV-GGHGAVIAGAIVD 221 (421)
T ss_dssp ---G-----GGT---CS---EEEEETTTTT-TCSSCCCCEEEEE
T ss_pred ---c-----ccC---Ce---EEEECCcccc-cCCCCcEEEEEEe
Confidence 1 111 34 8899999999 6689999999874
No 214
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.81 E-value=6.6e-18 Score=167.99 Aligned_cols=198 Identities=14% Similarity=0.165 Sum_probs=145.9
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHH-------
Q 013892 138 GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL------- 210 (434)
Q Consensus 138 ~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l------- 210 (434)
..+++++++++.+.+... .|.+..+..++++++++++ | . +++++++++++++..++..+
T Consensus 11 ~~~~~~~~~a~~~~~~~~------~~~~~~~~~~l~~~la~~~----~--~--~~~i~~~sGt~a~~~al~~~~~~~~~~ 76 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDSK------MFTMGEYVKQYETQFAKTF----G--S--KYAVMVSSGSTANLLMIAALFFTKKPR 76 (390)
T ss_dssp CCCCHHHHHHHHHHHHHT------CCSSCHHHHHHHHHHHHHH----T--C--SEEEEESCHHHHHHHHHHHTTSSSSCS
T ss_pred CCCCHHHHHHHHHHHHcC------CCCCChHHHHHHHHHHHHH----C--C--CcEEEECCHHHHHHHHHHHHHhhhhcC
Confidence 356899999998888752 3556778999999999998 2 1 25677777778999999998
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH
Q 013892 211 IRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE 290 (434)
Q Consensus 211 ~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~ 290 (434)
+ .+||+|+++.|+|+.+...++..|++++.++++++ +|.+|+++|++++++ ++++|+++| ++|...+
T Consensus 77 ~-~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~---~~g~~~~-- 143 (390)
T 3b8x_A 77 L-KKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTD------STKAILTVN---LLGNPNN-- 143 (390)
T ss_dssp C-CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCT------TEEEEEEEC---GGGCCCC--
T ss_pred C-CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCc------CCeEEEEEC---CccChhh--
Confidence 5 68999999999999999999999999999998764 578999999999876 799999985 3454444
Q ss_pred HHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCH
Q 013892 291 NQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSA 370 (434)
Q Consensus 291 ~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~ 370 (434)
+++|.++|+++|+++|+|++|......+.. .++ ...++. .+....+|.+. +| ++|++++ .++
T Consensus 144 -~~~i~~l~~~~~~~li~D~a~~~g~~~~~~----------~~g-~~~~~~-~~s~~~~k~~~--~g-~gG~~~~--~~~ 205 (390)
T 3b8x_A 144 -FDEINKIIGGRDIILLEDNCESMGATFNNK----------CAG-TFGLMG-TFSSFYSNHIA--TM-EGGCIVT--DDE 205 (390)
T ss_dssp -HHHHHHHHTTSCCEEEEECTTCTTCEETTE----------ETT-SSSSEE-EEECCTTSSSC--SS-SCEEEEE--SCH
T ss_pred -HHHHHHHHHHcCCEEEEECcCcccCEECCc----------ccc-cccceE-EEEccCCCCCc--cC-CceEEEe--CCH
Confidence 999999999999999999999853222210 111 112211 11113356552 23 5699876 345
Q ss_pred HHHHHHHHHh
Q 013892 371 EVREQIYKVA 380 (434)
Q Consensus 371 ~~~~~l~~~~ 380 (434)
++.+.+....
T Consensus 206 ~l~~~~~~~~ 215 (390)
T 3b8x_A 206 EIYHILLCIR 215 (390)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 7777765543
No 215
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.80 E-value=2e-18 Score=177.53 Aligned_cols=224 Identities=13% Similarity=0.133 Sum_probs=162.4
Q ss_pred CCCcccccccCCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHH
Q 013892 127 HPSILDRSETQGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMM 206 (434)
Q Consensus 127 ~p~~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 206 (434)
+|..+++..++ ..++.+++++.....+. ....|....+..++.+.+.+++.+.+|.+ ..+++++|+|+++++..+
T Consensus 100 ~~~yl~~~~~~-~~~~~v~~~~~~~~~n~---~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~a 174 (497)
T 2qma_A 100 HPDCIAHLHTP-PLMPAVAAEAMIAALNQ---SMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMG 174 (497)
T ss_dssp STTBCSSSCCC-CBHHHHHHHHHHHHHCC---CTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHH
T ss_pred CCCeeEeCCCC-CcHHHHHHHHHHHhhcc---cccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHH
Confidence 34444444333 55677777765554432 24456666678889999899998888854 237899999999999988
Q ss_pred HHHH----hc--------CC------CC-EEEEcCCCChhHHHHHHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 207 MQLL----IR--------SE------ND-GILCPIPQYPLYSASIALHGG---TLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 207 l~~l----~~--------~~------gd-~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
+..+ +. .+ |+ .|+++.+.|..+...++..|. +++.+++++ ++.+|+++|+++|++.
T Consensus 175 l~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~ 252 (497)
T 2qma_A 175 LMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQA 252 (497)
T ss_dssp HHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHH
Confidence 8873 20 02 46 899999999999999998876 799999864 5789999999999875
Q ss_pred HhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEE
Q 013892 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVS 344 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~ 344 (434)
.++|.++.+|++++++||||.+.+ +++|.++|+++|+++++|++|..+.+... + ......+. ..| ++
T Consensus 253 ~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~---~~~~~gi~--~~D---~i 319 (497)
T 2qma_A 253 KAEGLIPFAIVGTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS--H---KSRLKGVE--RAH---SI 319 (497)
T ss_dssp HHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST--T---GGGGTTGG--GCS---EE
T ss_pred HHCCCcceEEEEcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc--c---hHhhcCcc--cCC---EE
Confidence 444434558888899999999877 89999999999999999999998765432 1 11112221 134 56
Q ss_pred EecCCCCCCCCCCceeEEEEEecCCHHHHH
Q 013892 345 FQSVSKGYYGECGKRGGYMEVTGFSAEVRE 374 (434)
Q Consensus 345 i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~ 374 (434)
+.|++|.+ +. +.++|++++ .++..++
T Consensus 320 ~~s~hK~l-~~-p~~~G~l~~--~~~~~~~ 345 (497)
T 2qma_A 320 SVDFHKLF-YQ-TISCGALLV--NDKSNFK 345 (497)
T ss_dssp EEETTTTT-CC-CSSCEEEEE--SCGGGGG
T ss_pred EEcchhcc-CC-CcceEEEEE--eCHHHHH
Confidence 77899988 43 479999976 3444333
No 216
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.79 E-value=7.1e-19 Score=178.57 Aligned_cols=167 Identities=12% Similarity=0.043 Sum_probs=124.9
Q ss_pred CCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEE
Q 013892 163 YSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPY 242 (434)
Q Consensus 163 Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~ 242 (434)
|.+.....++++.+++ + | .+ +++++|+|+++++..++.+++ ++||+|+++.|+|..+...+...|++++.+
T Consensus 53 ~~~~~~~~~~~~~la~-~----g--~~-~~v~~~~G~t~a~~~~~~a~~-~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v 123 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-H----S--DY-DGYFLVNGTTSGILSVIQSFS-QKKGDILMARNVHKSVLHALDISQQEGHFI 123 (446)
T ss_dssp TSCSSHHHHHHHHHCS-C----T--TE-EEEEESSHHHHHHHHHHHTTT-TSSSCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred cCcchHHHHHHHHHHh-c----C--CC-ceEEEeCCHHHHHHHHHHHhc-CCCCEEEEecCccHHHHHHHHHcCCeEEEE
Confidence 4445556677777776 5 3 23 689999999999999999998 799999999999999999999999999999
Q ss_pred ecCCCCC----CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC-Ccc
Q 013892 243 YLDEATG----WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE-NVY 317 (434)
Q Consensus 243 ~~~~~~~----~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~-~~~ 317 (434)
+...+.+ +.+|++.| +.+ ++++|++++ +|+||.+++ +++|+++|+++|+++|+||+|.. +.|
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~~------~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NND------GHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred eCeeccccCcCCCCCHHHH---cCC------CceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 8832223 56788877 333 689999999 566999999 88999999999999999999997 334
Q ss_pred CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
.+. + .+.. .++ .| +++.|+||.+.|+ .++||+++
T Consensus 191 ~~~-~-~~~~----~~g---~D---i~~~S~~K~l~~~--~g~g~l~~ 224 (446)
T 2x3l_A 191 QGF-P-DSTL----NYQ---AD---YVVQSFHKTLPAL--TMGSVLYI 224 (446)
T ss_dssp TTS-C-CCGG----GGT---CS---EEEECHHHHSSSC--TTCEEEEE
T ss_pred CCC-C-CChH----HcC---CC---EEEECCccccccc--cccEEEEE
Confidence 432 1 2221 112 34 8899999976443 45799987
No 217
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.77 E-value=2.7e-17 Score=163.18 Aligned_cols=226 Identities=10% Similarity=0.111 Sum_probs=160.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHcC--CeEEEEec
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS--ASIALHG--GTLVPYYL 244 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~--~~~~~~g--~~~~~~~~ 244 (434)
..++.+.+++.+.+.+|.. +.+++|+|+++++..++..+ .+||+|+++.+.|..+. ..++..| .+++.++.
T Consensus 33 ~~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~--~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 107 (379)
T 3ke3_A 33 FQEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL--TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTA 107 (379)
T ss_dssp HHHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH--CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC--CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEec
Confidence 3456666666666666633 68999999999999988665 58999999999998753 3455566 47777776
Q ss_pred CCC------CCC-CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCcc
Q 013892 245 DEA------TGW-GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVY 317 (434)
Q Consensus 245 ~~~------~~~-~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~ 317 (434)
+.. ..| .+|++++++++++. ++++|++++++||||.+++.+++++|.++|+++|+++|+|+++. .
T Consensus 108 ~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g-- 179 (379)
T 3ke3_A 108 ERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G-- 179 (379)
T ss_dssp EESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T--
T ss_pred cccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C--
Confidence 431 112 47999999999653 78999999999999999999999999999999999999999976 2
Q ss_pred CCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh----------------
Q 013892 318 VPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS---------------- 381 (434)
Q Consensus 318 ~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~---------------- 381 (434)
.. ...+.. ++ -| +++.|++|.+.| +..+|++.+ ++++++.+.....
T Consensus 180 -~~--~~~~~~----~~---~d---~~~~s~~K~l~~--~~g~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 241 (379)
T 3ke3_A 180 -CV--WLDMKE----LG---ID---VLISAPQKGWSS--TPCAGLVML---SAAAIKKVESTESNCFSLDLKQWLTIMRA 241 (379)
T ss_dssp -TC--CCCHHH----HT---CS---EEEECTTTTTCS--CCCEEEEEE---CHHHHHHHHTCCCSCSTTCHHHHHHHHHH
T ss_pred -Cc--cccccc----cC---CC---EEEecchhhcCC--CCceEEEEE---CHHHHHhhhcCCCCceeecHHHHHHHHHh
Confidence 11 222211 11 23 678899999843 345899987 8888887764210
Q ss_pred -------cccCCchHHHHHHHHHcCCC--CCChHHHHHHHHHHHHHHHHHHHH
Q 013892 382 -------VNLCSNISGQILASLVMSPP--KVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 382 -------~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
....++...++++...++-- +..++..+++++.++.+.+.|++.
T Consensus 242 ~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 294 (379)
T 3ke3_A 242 YENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK 294 (379)
T ss_dssp HHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Confidence 01256666666555554321 113466677777777777777664
No 218
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.76 E-value=3.8e-17 Score=167.38 Aligned_cols=212 Identities=11% Similarity=0.025 Sum_probs=156.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCC--------CCEEEcCChHHHHHHHHHHHh
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADP--------NDIFLTDGASPAVHMMMQLLI 211 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--------~~i~~t~G~~~al~~~l~~l~ 211 (434)
+|..+.+.+...+.. ....|....+..++++.+++|+.+.+|.+... ...++|+|+++++..++.+..
T Consensus 91 ~~~~~~~~~~~~~n~----~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar 166 (481)
T 4e1o_A 91 WPSLLGDMLADAINC----LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAAR 166 (481)
T ss_dssp HHHHHHHHHHHHHCC----CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc----ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHH
Confidence 344344444555543 25678888899999999999999998876432 367899999999988877664
Q ss_pred c------------------CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE
Q 013892 212 R------------------SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (434)
Q Consensus 212 ~------------------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~ 273 (434)
. .+++.|+++.++|..+...++..|++++.++++ .++.+|+++|+++|++...+|..+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~ 244 (481)
T 4e1o_A 167 KNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVF 244 (481)
T ss_dssp HHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEE
Confidence 1 156799999999999999999999999999986 35789999999999886666656888
Q ss_pred EEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCC
Q 013892 274 LVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY 353 (434)
Q Consensus 274 i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~ 353 (434)
|+++.++|+||.+-+ +++|+++|++||+++++|++|....+.... +. .....+. ..| .+..+.+|.+
T Consensus 245 vv~~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~-~~---~~~~gi~--~aD---si~~~~hK~l- 311 (481)
T 4e1o_A 245 VCATLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPE-FR---GFLKGIE--YAD---SFTFNPSKWM- 311 (481)
T ss_dssp EEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGG-GG---GGGTTGG--GCS---EEEECHHHHS-
T ss_pred EEEecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChh-hH---HHhcCcc--cCC---EEEEChHHhc-
Confidence 888999999999866 999999999999999999999986543221 11 1111111 023 4556899988
Q ss_pred CCCCceeEEEEEecCCHHHH
Q 013892 354 GECGKRGGYMEVTGFSAEVR 373 (434)
Q Consensus 354 g~~G~R~G~~~~~~~~~~~~ 373 (434)
+.| .-+|++++ .++...
T Consensus 312 ~~p-~g~g~l~~--~~~~~l 328 (481)
T 4e1o_A 312 MVH-FDCTGFWV--KDKYKL 328 (481)
T ss_dssp SCC-SSCEEEEE--SBHHHH
T ss_pred CCC-CceEEEEE--eCHHHH
Confidence 433 33566654 355543
No 219
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.76 E-value=3.7e-17 Score=175.59 Aligned_cols=238 Identities=15% Similarity=0.105 Sum_probs=159.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 248 (434)
+.++++.+++++ | . .+.+++++|+++++..++.+++ ++||.|+++.|+|.++...+...|++++.++.+.+
T Consensus 207 v~~~ee~la~l~----G--~-d~~i~~~~Gtt~a~~~~i~al~-~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~- 277 (755)
T 2vyc_A 207 FGESEKYAARVF----G--A-DRSWSVVVGTSGSNRTIMQACM-TDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN- 277 (755)
T ss_dssp HHHHHHHHHHHH----T--C-SEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-
T ss_pred HHHHHHHHHHHh----C--C-CceEEECCcHHHHHHHHHHHhc-CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-
Confidence 456777777765 4 2 2458899999999999999998 79999999999999999989999999999987643
Q ss_pred CCC----C-----CHHHHHHHHHHH----HhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCC
Q 013892 249 GWG----L-----ETSEVKKQLEAA----KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQEN 315 (434)
Q Consensus 249 ~~~----~-----d~~~l~~~l~~~----~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~ 315 (434)
+|+ + |++.|++++++. .+++.++++++++|| ||+|.+.+ +++|+++|+++|+++|+||+|...
T Consensus 278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTT
T ss_pred ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchh
Confidence 444 4 999999999762 123445669999998 79999988 899999999999999999999864
Q ss_pred c-cCCCC-CccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce-eEEEEEecCCH-HH-HHHHHHHhh--cccCCch
Q 013892 316 V-YVPEK-KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR-GGYMEVTGFSA-EV-REQIYKVAS--VNLCSNI 388 (434)
Q Consensus 316 ~-~~~~~-~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R-~G~~~~~~~~~-~~-~~~l~~~~~--~~~~~~~ 388 (434)
. +++.. +...+ .. .. ....+.++|+++|++|++ +|.+ +|++++ .... .+ ...+..... ....++.
T Consensus 354 ~~~~~~~~~~~~~--~g-~~-aD~~~~~~iv~~S~hK~L---~g~~~g~~i~~-~~~~~~i~~~~~~~~~~~~~s~sp~~ 425 (755)
T 2vyc_A 354 ARFNPIYADHYAM--RG-EP-GDHNGPTVFATHSTHKLL---NALSQASYIHV-REGRGAINFSRFNQAYMMHATTSPLY 425 (755)
T ss_dssp GGGCGGGTTSSSS--CS-CC-CCCSSBEEEEEEETTTSS---SCCTTCEEEEE-ECCBTCCCHHHHHHHHHHTSCSSCCH
T ss_pred cccCcccCCcchh--cC-Cc-CCccCCCeEEEECccccc---cCcCCeeeeee-cCcccccCHHHHHHHHHHhCCCCHHH
Confidence 2 32210 01111 00 00 011223578999999987 4777 455544 2120 01 122222211 2234555
Q ss_pred HHHHHHHHHcCC-CCC-ChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 389 SGQILASLVMSP-PKV-GDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 389 ~~q~~~~~~l~~-~~~-~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+...+...+++. ... +++.+++..+..+.+++.|+++..
T Consensus 426 ~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 544433333321 111 356777788888888888887654
No 220
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.75 E-value=8.5e-18 Score=171.76 Aligned_cols=252 Identities=13% Similarity=0.085 Sum_probs=149.7
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCC---cc---hHHHHHHHHHHHHhhcCCCCCCCC---EEEcCChHHHHHHHHHHH
Q 013892 140 FSADSIERAWQILDQIPGRATGAYSHS---QG---IKGLRDTIAAGIEARDGFPADPND---IFLTDGASPAVHMMMQLL 210 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~~~~Y~~~---~G---~~~lr~~ia~~~~~~~g~~~~~~~---i~~t~G~~~al~~~l~~l 210 (434)
+++.|++++...+.+.. ..+|+.. .| ..++.+...+++.+.+|. +.++ .++++++++++..++.++
T Consensus 66 ~~~~V~eA~~~~l~~~y---~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~--~~~~~~~~v~~~sGt~An~~al~al 140 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKY---SEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL--DPAQWGVNVQPYSGSPANLAVYTAL 140 (490)
T ss_dssp CCHHHHHHHTSGGGTCC---CCC------------CTHHHHHHHHHHHHHTTC--CTTTEEEECCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCC---ccCCCcccccCccHHHHHHHHHHHHHHHHHcCC--CcccCceEEeCCchHHHHHHHHHHH
Confidence 58889999877765432 1223321 12 236665555666666673 3332 355567899999999999
Q ss_pred hcCCCCEEEEcCCCChhHHH--------HHHHcCCe--EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCC
Q 013892 211 IRSENDGILCPIPQYPLYSA--------SIALHGGT--LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPG 280 (434)
Q Consensus 211 ~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~ 280 (434)
+ +|||+|+++.+.|.++.. .+...|.. +++++++++ ++.+|+++|++.++.. ++++|+++.++
T Consensus 141 ~-~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~-~~~iD~d~le~~l~~~-----~~klIi~~~s~ 213 (490)
T 2a7v_A 141 L-QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSA 213 (490)
T ss_dssp C-CSCEECCC-------------------------------CCBCTT-TCSBCHHHHHHHHHHH-----CCSEEEECCSS
T ss_pred c-CCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccc-cCCcCHHHHHHHHhhc-----CCcEEEEcCCC
Confidence 8 799999999999875421 23345544 445555533 5689999999999764 78899888999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccCCC-CCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQ-ENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
||+ +.+ +++|.++|+++|+++++|+++. ++++.+. ..+.. . +-| +++.|++|+| .|.|
T Consensus 214 ~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~--~~~~~---~-----~aD---iv~~S~hK~l---~Gp~ 272 (490)
T 2a7v_A 214 YAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKV--IPSPF---K-----HAD---IVTTTTHKTL---RGAR 272 (490)
T ss_dssp CCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTS--SCCGG---G-----TCS---EEEEESSGGG---CSCS
T ss_pred CCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCc--CCCCC---C-----CCC---EEEECCcccC---cccc
Confidence 986 344 8999999999999999999965 4444332 11111 1 123 7889999988 3889
Q ss_pred eEEEEEecCCH--------------HHHHHHHHHhh--cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSA--------------EVREQIYKVAS--VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSS 421 (434)
Q Consensus 360 ~G~~~~~~~~~--------------~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~ 421 (434)
+|++++. +. ++.+.+.+... ....++.....+...++.. .+..++..++..++++.+.+.
T Consensus 273 GG~i~~~--~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~ 350 (490)
T 2a7v_A 273 SGLIFYR--KGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADA 350 (490)
T ss_dssp CEEEEEE--CSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred chheeec--cchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999862 21 35566665543 2223443333332322221 112245667777888888888
Q ss_pred HHHHH
Q 013892 422 LARRA 426 (434)
Q Consensus 422 L~~~~ 426 (434)
|++..
T Consensus 351 L~~~G 355 (490)
T 2a7v_A 351 LLERG 355 (490)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 87753
No 221
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.60 E-value=1.1e-19 Score=184.58 Aligned_cols=260 Identities=13% Similarity=0.032 Sum_probs=175.3
Q ss_pred CCCCcccccccCC-----CCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 126 DHPSILDRSETQG-----LFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 126 ~~p~~l~~~~~~~-----~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
+...+|||..+.. .-+|.+++++.+.+.... ...|+ .....+|.+.+++++ + ..+.++++++++
T Consensus 98 dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~---~~~~~-~~~~~~Lae~L~~~~----p---~~~~v~~~nSGs 166 (465)
T 2yky_A 98 DGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGL---NLSTQ-TENEALFAEAVCDRF----P---SIDLVRFTNSGT 166 (465)
Confidence 4556888877621 247889999888877631 23343 233556666666654 2 357899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHH----HcCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIA----LHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~ 273 (434)
+|+..+++.+.. ..+++|++.+++|..+...+. ..|. .++.++. .|++.|++.+++. +.++++
T Consensus 167 eA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~---~~~~aa 236 (465)
T 2yky_A 167 EANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRH---GHDCAA 236 (465)
Confidence 999999887531 245899999999987665433 1233 2222321 2788999988742 116777
Q ss_pred EEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCC
Q 013892 274 LVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (434)
Q Consensus 274 i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~ 352 (434)
|++...+|+||.+. +.+.+++|.++|+++|+++|+||+|. +.++. ...+ ...+ ..+| +.||||.+
T Consensus 237 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~---~~a~----~~~g-v~pD-----i~t~sK~l 302 (465)
T 2yky_A 237 ILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG---GGAQ----EMLG-ISAD-----LTTLGKYI 302 (465)
Confidence 77764456699655 57889999999999999999999999 63321 1111 1111 1133 34899999
Q ss_pred CCCCCceeEEEEEecCCHHHHHHHHH------HhhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 353 YGECGKRGGYMEVTGFSAEVREQIYK------VASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 353 ~g~~G~R~G~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
| .|+|+||+++ ++++++.+.. ....+.+.+++++.++...|+.-+. +..+++..+..+.+.+.|++..
T Consensus 303 -g-~G~piG~v~~---~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~-~~~~~~~~~~~~~l~~~L~~~~ 376 (465)
T 2yky_A 303 -G-GGMSFGAFGG---RRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT-RQAASDLSASGDRFRANLNRIA 376 (465)
Confidence 5 3999999977 8899998876 2334557888899888777764221 2466677777777777776653
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.73 E-value=1.3e-17 Score=177.85 Aligned_cols=235 Identities=14% Similarity=0.121 Sum_probs=150.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-HHHcCCeEEEEecCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS-IALHGGTLVPYYLDEA 247 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~~~~~~~ 247 (434)
+.++++.+|+++ | .+ ..+++++|+++++..++.+++ ++||+|+++.|+|..+... ++..|++++.++...+
T Consensus 175 i~e~e~~lA~~~----g--ae-~~i~v~nGtt~an~~ai~al~-~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~ 246 (730)
T 1c4k_A 175 AVAAEKHAARVY----N--AD-KTYFVLGGSSNANNTVTSALV-SNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN 246 (730)
T ss_dssp HHHHHHHHHHHT----T--CS-EEEEESSHHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC
T ss_pred HHHHHHHHHHHH----C--CC-cEEEECCHHHHHHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578888888876 4 22 358899999999999999998 7999999999999998887 8889999998877532
Q ss_pred CCCC----CCHHHH-----HHHHHHH-Hh-c-CCCe-eEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 248 TGWG----LETSEV-----KKQLEAA-KA-K-GITV-RALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 248 ~~~~----~d~~~l-----~~~l~~~-~~-~-g~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
+|+ +|+++| ++++++. .+ . ..++ ++|++++| ||+|.+.+ +++|+++|+++|+++|+||+|..
T Consensus 247 -~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~ 321 (730)
T 1c4k_A 247 -PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVG 321 (730)
T ss_dssp -TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCC
T ss_pred -ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEccccc
Confidence 344 688888 7766541 00 0 0012 89999999 68999988 89999999999999999999975
Q ss_pred C-ccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHH--------HHHHHHHhh--cc
Q 013892 315 N-VYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEV--------REQIYKVAS--VN 383 (434)
Q Consensus 315 ~-~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~--------~~~l~~~~~--~~ 383 (434)
. .|++..+..+.... ..++ .++.++++++|+||++ +|.++|+++.+. ++.+ ...+..... ..
T Consensus 322 ~~~f~~~~~g~~~l~~-~~~g--~D~~~~iv~~S~hK~L---~g~~~gg~I~v~-~~~l~g~~~~i~~~~~~~~~~~~~s 394 (730)
T 1c4k_A 322 YEQFIPMMRNSSPLLI-DDLG--PEDPGIIVVQSVHKQQ---AGFSQTSQIHKK-DSHIKGQLRYCDHKHFNNSFNLFMS 394 (730)
T ss_dssp GGGSSGGGGGGCTTSC-CCCC--TTSCEEEEEECHHHHS---SCCTTCEEEEEE-CGGGTTSTTCCCHHHHHHHHHHHSC
T ss_pred ccccCcccCCcCcccc-cccC--CCCCCEEEEECCCCCC---CCCCCEEEEEec-chhhcCcccccCHHHHHHHHHHhCC
Confidence 3 34321000000000 0011 1222579999999987 477766554222 2221 123322221 22
Q ss_pred cCCchHHHHHHHHH---cCCCCCChHHHHHHHHHHHHHHHHHHH
Q 013892 384 LCSNISGQILASLV---MSPPKVGDESYESYCAERDGILSSLAR 424 (434)
Q Consensus 384 ~~~~~~~q~~~~~~---l~~~~~~~~~~~~~~~~r~~l~~~L~~ 424 (434)
..++.....+...+ +.. +.+.+.+++..+..+.+++.|++
T Consensus 395 tsp~~~~iaal~aA~~~l~~-~~g~~~~~~~~~~a~~lr~~L~~ 437 (730)
T 1c4k_A 395 TSPFYPMYAALDVNAAMQEG-EAGRKLWHDLLITTIEARKKLIK 437 (730)
T ss_dssp SSCCHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHhh
Confidence 34444444333322 221 11345556666666666666655
No 223
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.73 E-value=1.4e-16 Score=162.84 Aligned_cols=189 Identities=12% Similarity=0.016 Sum_probs=145.6
Q ss_pred CCCCCCCcchHHHHHHHHHHHHhhcCCCCCC-------CCEEEcCChHHHHHHHHHHHhc------------------CC
Q 013892 160 TGAYSHSQGIKGLRDTIAAGIEARDGFPADP-------NDIFLTDGASPAVHMMMQLLIR------------------SE 214 (434)
Q Consensus 160 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-------~~i~~t~G~~~al~~~l~~l~~------------------~~ 214 (434)
...|....+..++++.+++|+.+.+|.+.+. ...++|+|+++++..++.+... .+
T Consensus 102 ~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~ 181 (475)
T 3k40_A 102 GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILG 181 (475)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccC
Confidence 5568888889999999999999998865432 3689999999998887776531 13
Q ss_pred CCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHH
Q 013892 215 NDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRA 294 (434)
Q Consensus 215 gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~ 294 (434)
++.|+++.+.|..+...++..|++++.+++++ ++ +|+++|+++|++..++|..+.+|+++.++|+||.+-+ +++
T Consensus 182 ~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~ 255 (475)
T 3k40_A 182 KLVGYCSDQAHSSVERAGLLGGVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDE 255 (475)
T ss_dssp HEEEEEETTSCHHHHHHHHHHTCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHH
T ss_pred CeEEEECCCchHHHHHHHHHcCCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHH
Confidence 46899999999999999999999999999874 46 9999999999986666656788899999999999976 999
Q ss_pred HHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 295 IVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 295 i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
|+++|++||+++++|++|....+.... +. .....+. ..| .+..+++|.+.+ ...+|++.+
T Consensus 256 I~~la~~~~~~lhvD~A~~~~~~~~~~-~~---~~~~gi~--~~D---s~~~~~hK~l~~--p~g~g~l~~ 315 (475)
T 3k40_A 256 CGPVGNKHNLWIHVDAAYAGSAFICPE-YR---HLMKGIE--SAD---SFNFNPHKWMLV--NFDCSAMWL 315 (475)
T ss_dssp HHHHHHHTTCEEEEECTTGGGGGGSGG-GG---GGGTTGG--GCS---EEEECHHHHSSC--CSSCEEEEE
T ss_pred HHHHHHHhCCeEEEeHHhHHHHHhCHh-hH---HHhcCcc--cCC---EEEECchhccCC--CCceEEEEE
Confidence 999999999999999999875443211 11 1111111 023 556789998742 345677765
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=8.8e-17 Score=162.62 Aligned_cols=173 Identities=20% Similarity=0.233 Sum_probs=118.8
Q ss_pred CcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HcCCeEEE
Q 013892 166 SQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVP 241 (434)
Q Consensus 166 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~ 241 (434)
.+|..++.+.+.+.+.+.+|. +++++++++|++.+...++.++..++||+|+++.++|+.+...++ ..|++++.
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~--~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGL--EIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTS--SEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCC--CccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 567666666666666666674 567899999999443333333211589999999999999886654 47999999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCC
Q 013892 242 YYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEK 321 (434)
Q Consensus 242 ~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~ 321 (434)
++.+ ++.+|+++ +++ ++++|++++| ||||.+.+ +++|+++|+++|+++|+|..-+. ++.
T Consensus 181 v~~~---~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a--~g~-- 239 (438)
T 1wyu_A 181 LPLE---GGRTPLPE----VGE------EVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS--LGV-- 239 (438)
T ss_dssp ECCB---TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG--GGT--
T ss_pred EcCc---CCccCHHH----hCC------CeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh--ccC--
Confidence 9872 24677665 433 7999999999 99999997 99999999999999996632111 111
Q ss_pred CccchHHHHhhhCCCCCCceEEEEecCCCCCC---CCCCceeEEEEEecCCHHHHHHH
Q 013892 322 KFHSFKKVSRSMGYGEKDISLVSFQSVSKGYY---GECGKRGGYMEVTGFSAEVREQI 376 (434)
Q Consensus 322 ~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~---g~~G~R~G~~~~~~~~~~~~~~l 376 (434)
+... ..++ .| +++.| +|.|+ ++.|.++||+.+ ++++++.+
T Consensus 240 -~~~~----~~~g---~D---~~~~s-~kk~~~~~~~~Gp~~G~l~~---~~~~~~~l 282 (438)
T 1wyu_A 240 -LKPP----GAYG---AD---IAVGD-GQSLGLPMGFGGPHFGFLAT---KKAFVRQL 282 (438)
T ss_dssp -BCCH----HHHT---CS---EEEEE-CTTTTCCCGGGCSCCEEEEE---CGGGGGGC
T ss_pred -cCCC----ccCC---CC---EEEEC-CcccCCCccCCCCCeeEEEE---cHHHHHhC
Confidence 1111 1222 34 44445 56542 466889999987 66766554
No 225
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.70 E-value=1.3e-16 Score=168.80 Aligned_cols=232 Identities=12% Similarity=0.084 Sum_probs=157.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC
Q 013892 169 IKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (434)
Q Consensus 169 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 248 (434)
+.++++.+|+++ | ....+++++|++.++..++.+++ ++||.|+++.++|.++...+...|++++.++.+.+
T Consensus 197 i~eaE~~lA~~f----G---a~~a~~v~nGts~An~~ai~al~-~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~- 267 (715)
T 3n75_A 197 HKEAEQYIARVF----N---ADRSYMVTNGTSTANKIVGMYSA-PAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRN- 267 (715)
T ss_dssp HHHHHHHHHHHH----T---CSEEEEESSHHHHHHHHHHHHHC-CTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-
T ss_pred HHHHHHHHHHHh----C---CCCceEECcHHHHHHHHHHHHhC-CCCCEEEECCCccHHHHHHHHHcCCEEEEEecccc-
Confidence 568888888887 3 13457788888999999999998 79999999999999999999999999999987643
Q ss_pred CCCC---------CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc-cC
Q 013892 249 GWGL---------ETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV-YV 318 (434)
Q Consensus 249 ~~~~---------d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~-~~ 318 (434)
+|++ |++.|++++++..+. ..++++++++| ||+|.+++ +++|+++|+++ .+|+||+|.... |.
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~-k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~--~livDEAH~~~~~f~ 340 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK--SIHFDSAWVPYTNFS 340 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHSTTC-CSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS--EEEEECTTCTTGGGS
T ss_pred ccccccCcccccCCHHHHHHHHhhCcCc-cCceEEEEECC-CCCCccCC---HHHHHHHhCcC--cEEEccccccccccC
Confidence 5664 899999999863110 12348999999 99999998 77777788765 379999998754 43
Q ss_pred CCCCccchHHHHhhhCCC-CCCceEEEEecCCCCCCCCCCc-eeEEEEEecCCHHHHHHHHHHhh--cccCCchHHHHHH
Q 013892 319 PEKKFHSFKKVSRSMGYG-EKDISLVSFQSVSKGYYGECGK-RGGYMEVTGFSAEVREQIYKVAS--VNLCSNISGQILA 394 (434)
Q Consensus 319 ~~~~~~s~~~~~~~l~~~-~~~~~~i~i~S~SK~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~q~~~ 394 (434)
+. .... ..+... ..|+-+++++|++|++. |+ -.||+++.+ . -..+.+..... .+..++.+..+++
T Consensus 341 ~~--~~~~----~al~~g~~aD~vii~~~S~hKtL~---gltqgs~i~v~~-~-i~~~~~~~~~~~~~STSpsy~~~Asl 409 (715)
T 3n75_A 341 PI--YEGK----CGMSGGRVEGKVIYETQSTHKLLA---AFSQASMIHVKG-D-VNEETFNEAYMMHTTTSPHYGIVAST 409 (715)
T ss_dssp GG--GTTS----STTSSSCCTTCEEEEEECHHHHSS---CCTTCEEEEEES-C-CCHHHHHHHHHHTSCSSCCHHHHHHH
T ss_pred Cc--cccc----cccccCcCCCEEEEEEeccccccc---CCCCeeEEEeCc-h-hhHHHHHHHHHhhcCCCchHHHHHHH
Confidence 21 1000 011111 13433467999999983 65 367776522 2 12233433333 2335555555544
Q ss_pred HHHcCCC--CCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 395 SLVMSPP--KVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 395 ~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
..++..- ..+.+.+++..+..+.+++.|++...
T Consensus 410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4333211 12346677788888888888887754
No 226
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.68 E-value=1.2e-16 Score=163.38 Aligned_cols=275 Identities=14% Similarity=0.107 Sum_probs=173.9
Q ss_pred CCCccccccc-C----CCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-Q----GLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-~----~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
...+|||..+ + ..-++.+++++.+.+..........|+. ....++++.+++.+.+..+ ...++|++++|+++
T Consensus 62 G~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGse 138 (472)
T 1ohv_A 62 GNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGSC 138 (472)
T ss_dssp SCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHHH
T ss_pred CCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCchh
Confidence 4557888776 1 2358999999887653210000112333 2357899999997766543 35679999999999
Q ss_pred HHHHHHHHHh-------cC-----------------CC---CEEEEcCCCChhHHHHHH-HcCCe-------------EE
Q 013892 202 AVHMMMQLLI-------RS-----------------EN---DGILCPIPQYPLYSASIA-LHGGT-------------LV 240 (434)
Q Consensus 202 al~~~l~~l~-------~~-----------------~g---d~Vlv~~p~y~~~~~~~~-~~g~~-------------~~ 240 (434)
|+..+++.+. +. +| ++|++.+++|..+..... ..|.. .+
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA 218 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence 9999998873 11 35 899999999988665543 33321 11
Q ss_pred EEecCC---CCC--C-----CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 241 PYYLDE---ATG--W-----GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ-VLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 241 ~~~~~~---~~~--~-----~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
+++... ... + ..|+++|++.|++....+.++++|+++..+|+||. ..+.+.+++|.++|++||+++|+|
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D 298 (472)
T 1ohv_A 219 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD 298 (472)
T ss_dssp CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 222100 000 0 12578888888764332235777777766888996 567999999999999999999999
Q ss_pred cCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCC-CCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCc
Q 013892 310 EVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKG-YYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSN 387 (434)
Q Consensus 310 eay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~-~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~ 387 (434)
|+|.++.+.+. +..+... .+. ..+| +.||||+ + | | ||++ ++++. .+.... ..+.+.+
T Consensus 299 Ev~~g~g~~g~--~~~~~~~--gv~-~~~D-----i~t~sK~~l-~--G---G~~~----~~~~~-~~~~~~~~~T~~~~ 357 (472)
T 1ohv_A 299 EVQTGGGSTGK--FWAHEHW--GLD-DPAD-----VMTFSKKMM-T--G---GFFH----KEEFR-PNAPYRIFNTWLGD 357 (472)
T ss_dssp CTTTTTTTTSS--SSGGGGG--CCS-SCCS-----EEEECGGGS-S--E---EEEE----CGGGS-CSSSSSSCCSSSSC
T ss_pred CcccCCCCCCC--chhcccc--CCC-CCCC-----EEEEccccc-c--C---CccC----chhhc-ccccccccCccCcc
Confidence 99998554432 2222111 110 0134 2389998 5 2 3 7764 33432 111111 2344678
Q ss_pred hHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 013892 388 ISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRA 426 (434)
Q Consensus 388 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 426 (434)
++++.++...++.... ++..+++++.++.+.+.|++..
T Consensus 358 ~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~ 395 (472)
T 1ohv_A 358 PSKNLLLAEVINIIKR-EDLLSNAAHAGKVLLTGLLDLQ 395 (472)
T ss_dssp HHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHH
Confidence 8888877766642111 2467888899999999988764
No 227
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.45 E-value=2.1e-12 Score=130.31 Aligned_cols=262 Identities=13% Similarity=0.060 Sum_probs=169.7
Q ss_pred CCCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
+....||+..+ -..-+|++++++.++++.... ... +..-..++.+.+++.+ . ..+.++++++++
T Consensus 85 dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~--~~~--~~~~~~~lae~l~~~~----p---~~~~v~f~~SGs 153 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGIN--LTG--HNLLEGRLARLICERF----P---QIEQLRFTNSGT 153 (454)
T ss_dssp TCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSC--CCS--EESSHHHHHHHHHHHS----T---TCSEEEEESSHH
T ss_pred CCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCC--ccC--CcHHHHHHHHHHHHhC----C---CCCEEEEeCchH
Confidence 45557887665 224579999999999876421 222 2222345555555543 2 357899999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHc------CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeE
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIALH------GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRA 273 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~ 273 (434)
+|+..+++.... ...++|+...-+|......+... ......+|. -|++.+++.+++.. .++.+
T Consensus 154 EA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~---~~iAa 223 (454)
T 4ao9_A 154 EANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHG---PEIAV 223 (454)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTG---GGEEE
T ss_pred HHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcC---CceEE
Confidence 999999887642 24578999888887643221110 112222222 27899999887632 24655
Q ss_pred EEEecCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCC
Q 013892 274 LVVINPGNPTGQVL-AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGY 352 (434)
Q Consensus 274 i~l~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~ 352 (434)
|++.-.+...|.+. +++.+++|.++|++||+++|+||+..+ ..+. .... ..++ ..|| ++ +++|.+
T Consensus 224 vIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~--~~a~----e~~g-v~PD--i~---t~gK~l 289 (454)
T 4ao9_A 224 VLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAP--HGLA----NKLG-IRSD--LT---TLGKYI 289 (454)
T ss_dssp EEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGST--TCHH----HHHT-CCCS--EE---EEEGGG
T ss_pred EEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcc--ccch----hccC-CCCc--EE---Eecccc
Confidence 55543344467654 567899999999999999999999974 2222 1111 1122 3477 22 678999
Q ss_pred CCCCCceeEEEEEecCCHHHHHHHHHH-----hhcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 353 YGECGKRGGYMEVTGFSAEVREQIYKV-----ASVNLCSNISGQILASLVMSPPKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 353 ~g~~G~R~G~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+ .|+.+|.+.+ .+++++.+... +..+++.++++.+++...|+.-+. ++.+++..++-+.+.+.|++...
T Consensus 290 g--gG~Piga~~~---~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~ 363 (454)
T 4ao9_A 290 G--GGMSFGAFGG---RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-PEAAGALAERGEALRARLNALCA 363 (454)
T ss_dssp G--TTSSCEEEEE---CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCcceeeee---HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHHh
Confidence 5 4899999987 88988877532 223456778887777666643221 46778888888888888887654
Q ss_pred H
Q 013892 428 A 428 (434)
Q Consensus 428 ~ 428 (434)
.
T Consensus 364 ~ 364 (454)
T 4ao9_A 364 N 364 (454)
T ss_dssp H
T ss_pred h
Confidence 3
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.44 E-value=5.6e-12 Score=126.29 Aligned_cols=191 Identities=12% Similarity=0.075 Sum_probs=128.9
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC---CCCEEEEcCCCChhHHHHHHHcCCeEEEEec
Q 013892 168 GIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS---ENDGILCPIPQYPLYSASIALHGGTLVPYYL 244 (434)
Q Consensus 168 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~ 244 (434)
+...+.+.+..++.+..|++- ....++++|+|.++..++...++. +++.|+++.-+|.....++...|+.++.++.
T Consensus 95 ~~~~~e~~~~~~~~~~lGlp~-~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 95 LLNKITNSLVLNVIKLAGVHS-VASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-CceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 355677788888877778542 234688888874444444444321 3799999999999999999999999988865
Q ss_pred CC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCC
Q 013892 245 DE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKK 322 (434)
Q Consensus 245 ~~-~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~ 322 (434)
.. +..+.+|++.|+++|++... +.+++++.+| .+.+|.+-+ +++|+++|++||+++++|+||+....
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~---~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~----- 242 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGP---EHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSS----- 242 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCG---GGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCH-----
T ss_pred eecCccCCcCHHHHHHHHHhcCC---CCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhh-----
Confidence 21 23578999999999987521 2456667777 444566666 99999999999999999999987321
Q ss_pred ccchHHHH-hhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHH
Q 013892 323 FHSFKKVS-RSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKV 379 (434)
Q Consensus 323 ~~s~~~~~-~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 379 (434)
+ ...+. ..+....-| .++.|..|.+. .-.-.+++.+ .+++.++++...
T Consensus 243 ~--~~~l~~~a~~~~~AD---~~v~S~HK~l~--a~~~~~~l~~--rd~~~~~~~~~~ 291 (450)
T 3bc8_A 243 K--CMHLIQQGARVGRID---AFVQSLDKNFM--VPVGGAIIAG--FNEPFIQDISKM 291 (450)
T ss_dssp H--HHHHHHHHHHHSCCC---EEEEEHHHHHS--CCSSCEEEEE--SCHHHHHHHHHH
T ss_pred h--hHhHHHHHhcccCCC---EEEECCccCCC--chhccEEEEe--cCHHHHHHHHHH
Confidence 1 11111 111001134 57789999873 2333555543 377777766543
No 229
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.43 E-value=4.1e-12 Score=126.09 Aligned_cols=235 Identities=11% Similarity=0.077 Sum_probs=144.0
Q ss_pred HHHHHH-HHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcC---CCCEEEEcCCCChhHHHHHHHcCCeEEEEecC-
Q 013892 171 GLRDTI-AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS---ENDGILCPIPQYPLYSASIALHGGTLVPYYLD- 245 (434)
Q Consensus 171 ~lr~~i-a~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~---~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~- 245 (434)
.|.+.+ .+|+.. .|++. ....++++|+|.++..++.+.++. .+|+|+++.-+|......+...|+++++++..
T Consensus 116 ~ltn~l~ld~L~~-~G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 116 KITNSLVLDIIKL-AGVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL 193 (501)
T ss_dssp HHHHHHHHHHHHH-TTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEE
T ss_pred HHHHHHHHHHHHH-cCCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeee
Confidence 344444 455554 47663 345899999997776666666632 24999999999999999999999999998762
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCcc
Q 013892 246 EATGWGLETSEVKKQLEAAKAKGITVRALVVIN-PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFH 324 (434)
Q Consensus 246 ~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~-p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~ 324 (434)
.++.+++|++.++++|++. +.+..++++.+ +.|-.|.+-+ +++|+++|++||+++++|+||+..... +.
T Consensus 194 d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~----~~ 263 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSK----CM 263 (501)
T ss_dssp ETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHH----HH
T ss_pred cccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhh----hh
Confidence 1225789999999999885 21334444444 4554445445 999999999999999999999874311 01
Q ss_pred chHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHhh-cccCCchHHHHHHHHHcCCCCC
Q 013892 325 SFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVAS-VNLCSNISGQILASLVMSPPKV 403 (434)
Q Consensus 325 s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~ 403 (434)
.+....-.++ .-| +++.|..|++. .=+.+|.+.. .++++++++..... ..+..+.+..+++...+-- +.
T Consensus 264 ~lp~sA~~~G--rAD---~vVqS~HK~ll--vpIGG~ii~~--~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lGr-~G 333 (501)
T 3hl2_A 264 HLIQQGARVG--RID---AFVQSLDKNFM--VPVGGAIIAG--FNDSFIQEISKMYPGRASASPSLDVLITLLSLGS-NG 333 (501)
T ss_dssp HHHHHHHHHS--CCC---EEEEEHHHHHC--CCSSCEEEEE--SCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHHH-HH
T ss_pred hhHHHHHhcC--CCc---EEEecccccce--eecCceEEEe--CCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHH-HH
Confidence 1111111222 134 68899999873 2233334322 47888877644321 1222233323333332211 11
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 404 GDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 404 ~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
..+.+++..+..+.+.+.|++.+.
T Consensus 334 y~~ll~e~~ela~~L~~~L~~la~ 357 (501)
T 3hl2_A 334 YKKLLKERKEMFSYLSNQIKKLSE 357 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244555555555666666666554
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.32 E-value=1e-10 Score=118.35 Aligned_cols=279 Identities=13% Similarity=0.088 Sum_probs=169.1
Q ss_pred CCCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChH
Q 013892 126 DHPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGAS 200 (434)
Q Consensus 126 ~~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 200 (434)
+....||+..+ -..-+|++++++.+++..... ....+.+.....+|.+.+++.. . .-..+.++++++++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGs 135 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTH-TCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGA 135 (456)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSC-CTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHH
T ss_pred CCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccC-cccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChH
Confidence 34457787665 234588999999988877432 1222333333445555555443 1 11245789999999
Q ss_pred HHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHH-cCC-------------eEEEEecC----CCCCCCCCHHHHHHHH
Q 013892 201 PAVHMMMQLLIR-SENDGILCPIPQYPLYSASIAL-HGG-------------TLVPYYLD----EATGWGLETSEVKKQL 261 (434)
Q Consensus 201 ~al~~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~-~g~-------------~~~~~~~~----~~~~~~~d~~~l~~~l 261 (434)
+|+..+++.... ....+|+...-+|.+....... .+- .+..+|.. .......+.+.+++.+
T Consensus 136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (456)
T 4atq_A 136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI 215 (456)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence 999999887532 2457899999888875543322 211 13333322 1111112345555555
Q ss_pred HHHHh--cCCCeeEEEEecCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCC
Q 013892 262 EAAKA--KGITVRALVVINPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEK 338 (434)
Q Consensus 262 ~~~~~--~g~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~ 338 (434)
+..+. .+.++.+|++.-.+.-.|.+ .+++.+++|.++|++||+++|+||+..++...+. +..+. .+ ...|
T Consensus 216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~--~~a~e----~~-gv~P 288 (456)
T 4atq_A 216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE--WFAVD----HE-GVVP 288 (456)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGG----GT-TCCC
T ss_pred HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc--ccccc----cc-CCCC
Confidence 43222 12245555554334446765 5567899999999999999999999999544443 33221 11 1347
Q ss_pred CceEEEEecCCCCCCCCCCceeEEEEEecCCHHHHHHHHHHh-hcccCCchHHHHHHHHHcCCCCCChHHHHHHHHHHHH
Q 013892 339 DISLVSFQSVSKGYYGECGKRGGYMEVTGFSAEVREQIYKVA-SVNLCSNISGQILASLVMSPPKVGDESYESYCAERDG 417 (434)
Q Consensus 339 ~~~~i~i~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 417 (434)
| ++ +++|.++ -|+.+|.+++ .+++.+.+.... ..+++.++++.+++.+.|+--+. +...++.++.-+.
T Consensus 289 D--iv---t~gK~lg--gg~P~~av~~---~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~-~~l~~~~~~~g~~ 357 (456)
T 4atq_A 289 D--II---TMAKGIA--GGLPLSAITG---RADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ-HDLNGRARHIEEL 357 (456)
T ss_dssp S--EE---EECGGGG--TTSSCEEEEE---EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHH
T ss_pred c--hh---hhhhccc--CcCCceeeEe---cHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhh-ccHHHHHHHHHHH
Confidence 8 22 6689994 5899999987 788877764432 25567788888888777742110 1355566666677
Q ss_pred HHHHHHHHHHH
Q 013892 418 ILSSLARRAKA 428 (434)
Q Consensus 418 l~~~L~~~~~~ 428 (434)
+.+.|+++...
T Consensus 358 l~~~L~~l~~~ 368 (456)
T 4atq_A 358 ALGKLRELAAE 368 (456)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 77777776554
No 231
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.27 E-value=1.1e-11 Score=121.88 Aligned_cols=249 Identities=14% Similarity=0.084 Sum_probs=157.8
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCCCCC--CC-----CcchHHHHHHHHHHHHhhcCCCCCCCCEEE-cCChHH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRATGAY--SH-----SQGIKGLRDTIAAGIEARDGFPADPNDIFL-TDGASP 201 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~~Y--~~-----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~-t~G~~~ 201 (434)
.++|+.++...|++|++++.+.+.+........| .. ..-+.+.|+.+++++ |.+ ++++|++ |+|+|+
T Consensus 6 ~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll----~~~-~~~~v~f~t~~~T~ 80 (361)
T 3m5u_A 6 KINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY----ELN-DDYEVLFLQGGASL 80 (361)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEEESSHHHH
T ss_pred eEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEEcCcHHH
Confidence 4567777778899999999887654221111111 11 122456666777776 421 2457887 999999
Q ss_pred HHHHHHHHHhcCCCCEEE-EcCCCCh-hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 202 AVHMMMQLLIRSENDGIL-CPIPQYP-LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 202 al~~~l~~l~~~~gd~Vl-v~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
++.+++..+. +||+++ +..-.|. .+...++..|+++..++.+.++.+.++++. + |++ ++++|.++|.
T Consensus 81 a~n~~~~~~~--~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~------~t~lv~~~~~ 149 (361)
T 3m5u_A 81 QFAMIPMNLA--LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSD------NADYAYICSN 149 (361)
T ss_dssp HHHHHHHHHC--CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCT------TSSEEEEESE
T ss_pred HHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCC------CCCEEEEeCC
Confidence 9999999986 677653 3333333 234456677999999998876433245544 3 554 7999999988
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCce
Q 013892 280 GNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKR 359 (434)
Q Consensus 280 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R 359 (434)
.|.||++++. +++ +|+++++|.+..-.... ..+ .+.. +++.|-.|.+ |.+|
T Consensus 150 e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g~~~-----id~-----------~~~d-~~~~s~~K~~-gp~G-- 200 (361)
T 3m5u_A 150 NTIYGTQYQN--------YPK-TKTPLIVDASSDFFSRK-----VDF-----------SNIA-LFYGGVQKNA-GISG-- 200 (361)
T ss_dssp ETTTTEECSS--------CCC-CSSCEEEECGGGTTSSC-----CCC-----------TTEE-EEEEETTTTS-SCTT--
T ss_pred CCCcceeCCc--------ccc-cCCEEEEEcccccCCCC-----CCc-----------ccCC-EEEEechhcc-CCCc--
Confidence 8899998772 233 49999999987642111 111 1122 5667889998 8777
Q ss_pred eEEEEEecCCHHHHHHHHH-----------H---hhcccCCchHHHHHHHHHcCC--CC-CChHHHHHHHHHHHHHHHHH
Q 013892 360 GGYMEVTGFSAEVREQIYK-----------V---ASVNLCSNISGQILASLVMSP--PK-VGDESYESYCAERDGILSSL 422 (434)
Q Consensus 360 ~G~~~~~~~~~~~~~~l~~-----------~---~~~~~~~~~~~q~~~~~~l~~--~~-~~~~~~~~~~~~r~~l~~~L 422 (434)
+|++.+ .+++.+.+.. . ...+..++..+.+++..+++- .. -++...++.++.++.+++.|
T Consensus 201 ~g~l~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L 277 (361)
T 3m5u_A 201 LSCIFI---RKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECI 277 (361)
T ss_dssp CEEEEE---EHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEE---cHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 466665 7777766542 1 112345666666655555542 12 24566777777888888888
Q ss_pred HHHH
Q 013892 423 ARRA 426 (434)
Q Consensus 423 ~~~~ 426 (434)
++..
T Consensus 278 ~~~~ 281 (361)
T 3m5u_A 278 DLSN 281 (361)
T ss_dssp HTST
T ss_pred HHCC
Confidence 7653
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.25 E-value=4e-10 Score=114.47 Aligned_cols=272 Identities=17% Similarity=0.133 Sum_probs=160.5
Q ss_pred CCCccccccc-----CCCCCHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHH
Q 013892 127 HPSILDRSET-----QGLFSADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASP 201 (434)
Q Consensus 127 ~p~~l~~~~~-----~~~~p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 201 (434)
....||+..+ -..-+|++++++.+++.+... .+.+.. ...+....+|+.+.+... .+.+.+++++++++
T Consensus 66 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~--~~~~~~--~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGsE 139 (473)
T 4e3q_A 66 GRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPG--YHAFFG--RMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGSE 139 (473)
T ss_dssp CCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCC--CCCCTT--EEEHHHHHHHHHHHHHSS--CSSCEEEEESSHHH
T ss_pred CCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhccc--cccccc--ccCHHHHHHHHHHHhhCC--CCccEEEEeCchHH
Confidence 3446676555 223578899999999887532 111111 112333445555544432 34568999999999
Q ss_pred HHHHHHHHHhc-------CCCCEEEEcCCCChhHHHHHH-HcCC-----------eEEEEecCCC---CCCCCC------
Q 013892 202 AVHMMMQLLIR-------SENDGILCPIPQYPLYSASIA-LHGG-----------TLVPYYLDEA---TGWGLE------ 253 (434)
Q Consensus 202 al~~~l~~l~~-------~~gd~Vlv~~p~y~~~~~~~~-~~g~-----------~~~~~~~~~~---~~~~~d------ 253 (434)
|+..+++.... ....+|+...-+|.+...... ..|- ....++.... ...+-.
T Consensus 140 A~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 219 (473)
T 4e3q_A 140 ANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVA 219 (473)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHH
Confidence 99999987531 123578888888876443322 2221 1222221100 000111
Q ss_pred --HHHHHHHHHHHHhcCCCeeEEEEecC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHH
Q 013892 254 --TSEVKKQLEAAKAKGITVRALVVINP-GNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKV 329 (434)
Q Consensus 254 --~~~l~~~l~~~~~~g~~~~~i~l~~p-~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~ 329 (434)
.+++++.+... +.+.-+.++.-| +.-.|.+ .+++.+++|.++|++||+++|+||+..+|...+. +....
T Consensus 220 ~~~~~l~~~i~~~---~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~--~fa~e-- 292 (473)
T 4e3q_A 220 RLARELEETIQRE---GADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGN--TWGCV-- 292 (473)
T ss_dssp HHHHHHHHHHHHH---CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSS--SCHHH--
T ss_pred HHHHHHHHHHHhh---CCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccc--hhHHH--
Confidence 23445555432 223334455555 5546765 4567899999999999999999999999544433 32221
Q ss_pred HhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEEecCCHHHHHHHHHH--------hhcccCCchHHHHHHHHHcCC
Q 013892 330 SRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFSAEVREQIYKV--------ASVNLCSNISGQILASLVMSP 400 (434)
Q Consensus 330 ~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~ 400 (434)
.+ ...|| ++ +++|.++ .| +.+|.+++ .+++.+.+... +..+++.++++.+++...|+-
T Consensus 293 --~~-gv~PD--i~---t~~K~l~--gG~~Pl~av~~---~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~ 359 (473)
T 4e3q_A 293 --TY-DFTPD--AI---ISSKNLT--AGFFPMGAVIL---GPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDV 359 (473)
T ss_dssp --HT-TCCCS--EE---EECGGGG--TTSSCCEEEEE---CHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHH
T ss_pred --hc-CCCCC--hH---Hhccccc--CCCCCcccccc---cHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhh
Confidence 11 23478 22 6789995 46 89999988 99999888653 224556778888777766642
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHH
Q 013892 401 PKVGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 401 ~~~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
-+. +...++.++.-+.+.+.|+++
T Consensus 360 i~~-~~l~~~~~~~g~~l~~~L~~l 383 (473)
T 4e3q_A 360 VMN-EGLAENVRRLAPRFEERLKHI 383 (473)
T ss_dssp HHH-SSHHHHHHHHHHHHHHHHHHH
T ss_pred hcc-ccHHHHHHHHHHHHHHHHHHH
Confidence 110 134556666666677766654
No 233
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.23 E-value=3.6e-12 Score=126.40 Aligned_cols=194 Identities=12% Similarity=-0.007 Sum_probs=124.8
Q ss_pred cccccccCCCCCHHHHHHHHHHHHcCCCCCCC-----CCC--CCcchHHHHHHHHHHHHhhcCCCCC-CCCEEE-cCChH
Q 013892 130 ILDRSETQGLFSADSIERAWQILDQIPGRATG-----AYS--HSQGIKGLRDTIAAGIEARDGFPAD-PNDIFL-TDGAS 200 (434)
Q Consensus 130 ~l~~~~~~~~~p~~v~~~~~~~l~~~~~~~~~-----~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~-t~G~~ 200 (434)
++.++.++...|++|++++.+.+.+....... ..+ ...-+.+.|+.+++++ | ++ +++|++ |+|+|
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll----~--~~~~~evif~t~~~T 101 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL----N--IPSNYKVLFCHGGGR 101 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH----T--CCTTEEEEEEESCTT
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh----C--CCCCceEEEEcCCch
Confidence 34456667789999999987766432211111 111 1244778999999998 3 33 346888 68999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecC-CCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEe
Q 013892 201 PAVHMMMQLLIRSENDGILCPIPQYPL--YSASIALHGGTLVPYYLD-EATGWGLETSEVKKQLEAAKAKGITVRALVVI 277 (434)
Q Consensus 201 ~al~~~l~~l~~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~ 277 (434)
+++.+++..++ .+||+|++..-++.. +...++..| ++..++.+ ++.++.++++.++.++++ ++++|.++
T Consensus 102 ~a~n~ai~~l~-~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~------~t~lV~~~ 173 (386)
T 3qm2_A 102 GQFAGVPLNLL-GDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSD------NAAYLHYC 173 (386)
T ss_dssp HHHHHHHHHHC-TTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCT------TCSCEEEC
T ss_pred HHHHHHHHhcc-CCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCC------CCcEEEEE
Confidence 99999999998 689998755544433 333455568 88888876 122223677777776665 79999888
Q ss_pred cCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCC
Q 013892 278 NPGNPTGQV-LAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGEC 356 (434)
Q Consensus 278 ~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~ 356 (434)
+-.|.||++ .+ +++|. +|+++++|.+..-... ...+. .+ + +.+.|-.|.+ |.+
T Consensus 174 h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~g~~-----pidv~----~~-----~---~~~~s~hK~l-GP~ 227 (386)
T 3qm2_A 174 PNETIDGIAIDE---TPDFG-----PEVVVTADFSSTILSA-----PLDVS----RY-----G---VIYAGAQKNI-GPA 227 (386)
T ss_dssp SEETTTTEECCC---CCCCC-----TTCCEEEECTTTTTSS-----CCCGG----GC-----S---EEEEETTTTT-CCT
T ss_pred CCcCCcCEecCc---hhhhc-----CCCEEEEEcccccCCC-----CCCcc----cc-----C---EEEEeccccc-CCC
Confidence 888889996 66 44543 7999999998764211 11111 11 2 3557889998 777
Q ss_pred CceeEEEEE
Q 013892 357 GKRGGYMEV 365 (434)
Q Consensus 357 G~R~G~~~~ 365 (434)
| +|++.+
T Consensus 228 G--~g~l~v 234 (386)
T 3qm2_A 228 G--LTLVIV 234 (386)
T ss_dssp T--EEEEEE
T ss_pred c--cEEEEE
Confidence 7 566655
No 234
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.21 E-value=1.2e-11 Score=122.20 Aligned_cols=245 Identities=12% Similarity=0.031 Sum_probs=151.7
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCC--CC-C----cchHHHHHHHHHHHHhhcCCCCCCCCEEE-cCChHHHHHHHHH
Q 013892 137 QGLFSADSIERAWQILDQIPGRATGAY--SH-S----QGIKGLRDTIAAGIEARDGFPADPNDIFL-TDGASPAVHMMMQ 208 (434)
Q Consensus 137 ~~~~p~~v~~~~~~~l~~~~~~~~~~Y--~~-~----~G~~~lr~~ia~~~~~~~g~~~~~~~i~~-t~G~~~al~~~l~ 208 (434)
....|++|++++.+.+.+........+ .. . .-+.+.|+.+++++ |.+ ++++|++ |.|+|+++.+++.
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll----~~~-~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL----AVP-DNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEEESSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEEcCchHHHHHHHHH
Confidence 557899999999887754322111111 11 1 12445666677766 421 2357888 5899999999999
Q ss_pred HHhc-CCCCEEEEcCCCChh--HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc
Q 013892 209 LLIR-SENDGILCPIPQYPL--YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ 285 (434)
Q Consensus 209 ~l~~-~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~ 285 (434)
.+.. .+||+|++..-++.. +...++..|..++.++.+. +++.+++.++.++++ ++++|.+++-.|.||+
T Consensus 96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~------~t~lV~~~h~et~tG~ 167 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNP------DASYVYYCANETVHGV 167 (377)
T ss_dssp HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCT------TCSCEEEESEETTTTE
T ss_pred hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCC------CccEEEEeCccCchhe
Confidence 9873 238999877765544 3334555687777666643 345666666655554 7899999988889999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEEE
Q 013892 286 VLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 365 (434)
Q Consensus 286 ~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~~ 365 (434)
+.+. +|+++|+++++|.+..-.... ..+ ..+ + +++.|-.|.+ |.+|+ |++.+
T Consensus 168 ~~pi--------i~~~~~~~~~vD~~q~~g~~~-----id~----~~~-----~---~~~~s~~K~~-gp~G~--g~l~~ 219 (377)
T 3e77_A 168 EFDF--------IPDVKGAVLVCDMSSNFLSKP-----VDV----SKF-----G---VIFAGAQKNV-GSAGV--TVVIV 219 (377)
T ss_dssp ECSS--------CCCCTTCCEEEECTTTTTSSC-----CCG----GGC-----S---EEEEEGGGTT-SCTTC--EEEEE
T ss_pred Echh--------hhccCCCEEEEEcccccCCCC-----Cch----hhc-----C---EEEEeccccc-CCCcc--EEEEE
Confidence 9984 367889999999988742211 111 111 2 3567889999 87885 55554
Q ss_pred ecCCHHHHHHH----------HHH---hhcccCCchHHHHHHHHHcCCC-C--CChHHHHHHHHHHHHHHHHHHHH
Q 013892 366 TGFSAEVREQI----------YKV---ASVNLCSNISGQILASLVMSPP-K--VGDESYESYCAERDGILSSLARR 425 (434)
Q Consensus 366 ~~~~~~~~~~l----------~~~---~~~~~~~~~~~q~~~~~~l~~~-~--~~~~~~~~~~~~r~~l~~~L~~~ 425 (434)
.+++++.+ ... ......++..+.+++..+++-- + -++...++.++..+.+++.|++.
T Consensus 220 ---~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~ 292 (377)
T 3e77_A 220 ---RDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNS 292 (377)
T ss_dssp ---ETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ---cHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 32322111 111 1134456666666655555421 1 23566667777777777777654
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.01 E-value=5e-09 Score=113.40 Aligned_cols=246 Identities=13% Similarity=0.103 Sum_probs=145.7
Q ss_pred Cccccccc----CCC-C-CHHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCC-CCCEEEcCChHH
Q 013892 129 SILDRSET----QGL-F-SADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPAD-PNDIFLTDGASP 201 (434)
Q Consensus 129 ~~l~~~~~----~~~-~-p~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~ 201 (434)
.+||+..+ ..+ - +|++++++.+++.+........+ ..+....+|+.+.+..+ -. .+.+++++++++
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~-----~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSe 453 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPEN-----VYEPALKCAELLLDGVG--KGWASRVYFSDNGST 453 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTE-----ECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhccccccccc-----CCHHHHHHHHHHHHhCC--CCCCCEEEECCChhH
Confidence 46777665 222 2 68999999988876431001111 22333455555554332 12 468999999999
Q ss_pred HHHHHHHHHh----cCC------------CCEEEEcCCCChhH-HHHHHHcCCe---------------E----------
Q 013892 202 AVHMMMQLLI----RSE------------NDGILCPIPQYPLY-SASIALHGGT---------------L---------- 239 (434)
Q Consensus 202 al~~~l~~l~----~~~------------gd~Vlv~~p~y~~~-~~~~~~~g~~---------------~---------- 239 (434)
|+..+++... ... ..+|+...-.|.+- ...+...|.. +
T Consensus 454 A~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 533 (831)
T 4a0g_A 454 AIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLS 533 (831)
T ss_dssp HHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEE
T ss_pred HHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCcccccc
Confidence 9999988762 112 23688888888653 3333433310 0
Q ss_pred ---EEEecCCC------C--CCCCC------------------HHHHHHHHHHHH--hcCCCeeEEEEecC-CCCCccCC
Q 013892 240 ---VPYYLDEA------T--GWGLE------------------TSEVKKQLEAAK--AKGITVRALVVINP-GNPTGQVL 287 (434)
Q Consensus 240 ---~~~~~~~~------~--~~~~d------------------~~~l~~~l~~~~--~~g~~~~~i~l~~p-~NPtG~~~ 287 (434)
..++.... + .|. + .+.|++.|++.. ..+.++.+|++... ++..|...
T Consensus 534 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~ 612 (831)
T 4a0g_A 534 NGSWNISLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHM 612 (831)
T ss_dssp TTEEEEECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEE
T ss_pred CCceEecCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCcc
Confidence 01111100 0 010 1 245666654311 11224555555443 78788765
Q ss_pred -CHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCC-ceeEEEEE
Q 013892 288 -AEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEV 365 (434)
Q Consensus 288 -~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G-~R~G~~~~ 365 (434)
+++.+++|.++|++||+++|+||++.++...+. ..... .++ ..+| ++ +|||.++ .| +++|++++
T Consensus 613 ~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~--~fa~e----~~g-v~PD--ii---tlsK~L~--gG~~Plgav~~ 678 (831)
T 4a0g_A 613 VDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV--ETTTE----LLG-CKPD--IA---CFAKLLT--GGMVPLAVTLA 678 (831)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB--SSTHH----HHS-SCCS--EE---EECGGGG--TTSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC--chhhH----hcC-CCCc--EE---EEecccc--cCccCcEEEEE
Confidence 778899999999999999999999999655543 22221 122 2366 22 6999995 37 89999988
Q ss_pred ecCCHHHHHHHHHH-------hhcccCCchHHHHHHHHHcC
Q 013892 366 TGFSAEVREQIYKV-------ASVNLCSNISGQILASLVMS 399 (434)
Q Consensus 366 ~~~~~~~~~~l~~~-------~~~~~~~~~~~q~~~~~~l~ 399 (434)
++++++.+... ...+++.++++++++...|+
T Consensus 679 ---~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~ 716 (831)
T 4a0g_A 679 ---TDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQ 716 (831)
T ss_dssp ---CHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred ---CHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHH
Confidence 99999887542 22445677888877766553
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.92 E-value=2.5e-08 Score=98.67 Aligned_cols=261 Identities=11% Similarity=0.043 Sum_probs=144.1
Q ss_pred CCHHHHHHHHHHHHcCCCCC---CCCCCCCcchHHHHHHHHHHHHhhcCCCCCCC--CEEEcCChHHHHHHHHHHHhcCC
Q 013892 140 FSADSIERAWQILDQIPGRA---TGAYSHSQGIKGLRDTIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSE 214 (434)
Q Consensus 140 ~p~~v~~~~~~~l~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~l~~l~~~~ 214 (434)
.++.|+++.-..+.+-...+ ..-|+-..-+.++.....+...+.+|...... +|-.-+ ++.|...++.+|+ +|
T Consensus 66 ~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~S-Gs~AN~avy~All-~P 143 (490)
T 3ou5_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYS-GSPANLAVYTALL-QP 143 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSS-HHHHHHHHHHHHC-C-
T ss_pred CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCC-HHHHHHHHHHHHc-CC
Confidence 46777777655554432111 11122233244555555556666677432211 344444 5567777777888 79
Q ss_pred CCEEEEcCCCChhHHHHH--------HHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 215 NDGILCPIPQYPLYSASI--------ALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 215 gd~Vlv~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
||+|+..+..+.++..-- ...| .+.++|.++++ +..+|.|++++..++. +||+|++---.+|-
T Consensus 144 GD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~r- 216 (490)
T 3ou5_A 144 HDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYAR- 216 (490)
T ss_dssp CCCEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHH-----CCSEEEECCSSCCS-
T ss_pred CCEEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhc-----CCCeEEECCccCcc-
Confidence 999999998877654321 1112 35666777655 3479999999999887 89999876544443
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCCCCCccCCCCCccchHHHHhhhCCCCCCceEEEEecCCCCCCCCCCceeEEEE
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 364 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~i~i~S~SK~~~g~~G~R~G~~~ 364 (434)
.++ ++++.++|.+-|.++++|.+|......+.. +++.. + +.| |+..|..|+| .|-|+|.+.
T Consensus 217 -~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~-~psP~---~-----~AD---vVTtTTHKTL---rGPrGG~Il 277 (490)
T 3ou5_A 217 -LID---YARMREVCDEVKAHLLADMAHISGLVAAKV-IPSPF---K-----HAD---IVTTTTHKTL---RGARSGLIF 277 (490)
T ss_dssp -CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTS-SCCGG---G-----TCS---EEEEESSSTT---CSCSCEEEE
T ss_pred -ccC---HHHHHHHHhhcccEEEechhhhhhhhcccc-cCCcc---c-----cce---EEeccccccc---cCCCceEEE
Confidence 344 888888999999999999998654333221 33322 1 134 7889999998 599999987
Q ss_pred EecCC------H-------HHHHHHHHHhh--cccCCchHHHHHHHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHHHH
Q 013892 365 VTGFS------A-------EVREQIYKVAS--VNLCSNISGQILASLVMSP--PKVGDESYESYCAERDGILSSLARRAK 427 (434)
Q Consensus 365 ~~~~~------~-------~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~ 427 (434)
+ +.+ + ++.+.|.+..- ...+|....-++.+.++.. ..+..+..++..++.+.|.+.|.+++.
T Consensus 278 ~-~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~ 356 (490)
T 3ou5_A 278 Y-RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGY 356 (490)
T ss_dssp E-ECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred e-ccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6 211 0 46667766543 2223322221111111111 112345566777777888888777654
Q ss_pred HH
Q 013892 428 AN 429 (434)
Q Consensus 428 ~~ 429 (434)
.+
T Consensus 357 ~v 358 (490)
T 3ou5_A 357 SL 358 (490)
T ss_dssp EE
T ss_pred ee
Confidence 33
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.33 E-value=1.4 Score=40.76 Aligned_cols=102 Identities=20% Similarity=0.155 Sum_probs=65.8
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
-+++|.|+...-..+.+.|. ..|-.|++..-.-......++..|.+...+.+|- -|.+++++.++...++..+.
T Consensus 31 valVTGas~GIG~aiA~~la-~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFV-AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSCE
T ss_pred EEEEeCcCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 34555555444445556666 6888888877665666677777888888888763 37788888887765544356
Q ss_pred eEEEEecCCCCCcc--CCCHHHHHHHHHHH
Q 013892 272 RALVVINPGNPTGQ--VLAEENQRAIVDFC 299 (434)
Q Consensus 272 ~~i~l~~p~NPtG~--~~~~~~l~~i~~~~ 299 (434)
..++-+-..++.+- .++.++|+++.++-
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 65544322333332 45778999888753
No 238
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.88 E-value=5.7 Score=36.11 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=64.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
-..+++|.|+...-..+.+.|. ..|-.|++.+-.-..... .++..|.++..+.+|- -|.+++++.++...+
T Consensus 9 gKvalVTGas~GIG~aia~~la-~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLA-AAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDV-----TDELAIEAAFSKLDA 82 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 3345555555444455556666 688899887765443333 3445688888887763 378889998888777
Q ss_pred cCCCeeEEEEecC-CCCCcc--CCCHHHHHHHHHH
Q 013892 267 KGITVRALVVINP-GNPTGQ--VLAEENQRAIVDF 298 (434)
Q Consensus 267 ~g~~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 298 (434)
+..+...++ +|. .++.+- -++.++|+++.++
T Consensus 83 ~~G~iDiLV-NNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 83 EGIHVDILI-NNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TTCCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 665676554 444 233332 4677888887764
No 239
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=88.03 E-value=3.9 Score=36.66 Aligned_cols=101 Identities=16% Similarity=0.058 Sum_probs=61.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-..........|.++..+.+|- -|.+.+++.++...+...+
T Consensus 7 k~vlVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLA-ADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCCC
Confidence 345666555444445556666 5788888877665666666666688888777663 3678888877765444335
Q ss_pred eeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
...++-+-...+.+. ..+.++|+++.+
T Consensus 81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 81 IDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 665554422223222 456677776654
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=86.77 E-value=5.9 Score=36.21 Aligned_cols=102 Identities=17% Similarity=0.077 Sum_probs=61.0
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-..........+.++..+.+|- -|.+.+++.++...++..
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFA-KNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 3345666555444445566666 5788888876655555556666777888887763 377888887776544433
Q ss_pred CeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 270 TVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
+...++-+-...+.+ ...+.++|+++.+
T Consensus 101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 555544432222222 2456777776654
No 241
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.78 E-value=7.5 Score=34.91 Aligned_cols=101 Identities=10% Similarity=0.028 Sum_probs=61.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-..........+.++..+.+|- -|.+.+++.++...++..+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYV-REGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666665544455566666 5788888876655555666666677777777663 3778888888776555445
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++-+-...+.+ ...+.++++++.+
T Consensus 83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 83 LDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 66555442222222 2346677765543
No 242
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.18 E-value=5.4 Score=36.48 Aligned_cols=100 Identities=14% Similarity=0.031 Sum_probs=58.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+.+|- -|.+.+++.++...++..+.
T Consensus 31 ~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLA-DEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHSSC
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 45555555444444555666 5788888876655555566666677777777663 36788887777654443356
Q ss_pred eEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 272 RALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..++-+-...+.+. ..+.++++++.+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 65554422222222 456777776654
No 243
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=84.86 E-value=5.7 Score=35.24 Aligned_cols=100 Identities=17% Similarity=0.150 Sum_probs=56.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+..+..+.+|-. |.+.+++.++...++..+.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLV-ERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA-----HHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----SHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCC-----CHHHHHHHHHHHHHhcCCC
Confidence 35666555444444555666 57888887766555555555555556667766633 6778887777654443356
Q ss_pred eEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 272 RALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..++-+-...+.+. ..+.++++++.+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 65554432222222 346777776654
No 244
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=84.81 E-value=6.4 Score=35.72 Aligned_cols=101 Identities=9% Similarity=0.029 Sum_probs=58.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+..|- -|.+.+++.++...++..+
T Consensus 28 k~vlVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFH-AQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHHHHHHHTS
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHHHHHHHcCC
Confidence 345666555444445556666 5788888776655556666667788888887764 3778888877765444335
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...+|-+-...+.+ ...+.++|+++.+
T Consensus 102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 102 IDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp CCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 65555432222222 2244556655443
No 245
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=84.73 E-value=7.3 Score=35.01 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=61.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-.......+..|.++..+.+|-. |.+.+++.++...+...+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLV-EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIA-----DLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC-----CHHHHHHHHHHHHHHhCC
Confidence 456666666554455666666 57888887766555555566666777888777643 677777777665443335
Q ss_pred eeEEEEecCC-CCCc--cCCCHHHHHHHHHH
Q 013892 271 VRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 271 ~~~i~l~~p~-NPtG--~~~~~~~l~~i~~~ 298 (434)
...++ +|.. .+.+ ..++.+++++..+.
T Consensus 83 id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 83 IDLLH-INAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEEEE-ECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 65544 4442 2222 13477777776653
No 246
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=84.69 E-value=7.6 Score=34.78 Aligned_cols=101 Identities=17% Similarity=0.073 Sum_probs=59.6
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.+++.++...++..
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFA-KGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAALSKFG 82 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHhcC
Confidence 3456666655444445556666 57888888776655566666667778888877643 67778777776544433
Q ss_pred CeeEEEEecC-CCCCc--cCCCHHHHHHHH
Q 013892 270 TVRALVVINP-GNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 270 ~~~~i~l~~p-~NPtG--~~~~~~~l~~i~ 296 (434)
+...++.+-. ..+.+ ...+.+++++..
T Consensus 83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (261)
T 3n74_A 83 KVDILVNNAGIGHKPQNAELVEPEEFDRIV 112 (261)
T ss_dssp CCCEEEECCCCCCCSCCGGGSCHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHH
Confidence 5555554422 22122 224667666543
No 247
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=84.64 E-value=13 Score=32.81 Aligned_cols=101 Identities=11% Similarity=0.104 Sum_probs=59.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|.+|++..-.-..... .++..|.++..+.+|- -|.+.+++.++...++
T Consensus 6 k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALA-SKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFFAEIKAE 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 346666655444445556666 578888776654443333 3444577888887763 3788888888876655
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++.+-...+.+ ...+.+++++..+
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 54666655442222222 1346666665443
No 248
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.59 E-value=13 Score=33.29 Aligned_cols=100 Identities=16% Similarity=0.115 Sum_probs=58.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-... ...++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFA-AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHhh
Confidence 346666655544455556666 5788887766544433 3334445888888887743 778888888776555
Q ss_pred CCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
.+...++-+-...+.+. ..+.++++++.+
T Consensus 82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 -APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred -CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 36665554422222222 356677766543
No 249
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=83.88 E-value=11 Score=34.11 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=60.1
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...+
T Consensus 26 gk~~lVTGas~gIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLA-VAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLDE 99 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3445666555444455566666 5788888877654444333 334577777777663 378888888877655
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
+..+...++-+-...+.+ ...+.++|+++.+
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 554566555442222222 2356777766544
No 250
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=83.84 E-value=7.8 Score=34.99 Aligned_cols=100 Identities=11% Similarity=0.062 Sum_probs=54.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-......+...+...+ .+|- -|.+.+++.++...+...
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~Dv-----~~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLL-EHGHRVIISYRTEHASVTELRQAGAVAL--YGDF-----SCETGIMAFIDLLKTQTS 98 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHH-HTTCCEEEEESSCCHHHHHHHHHTCEEE--ECCT-----TSHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHhcCCeEE--ECCC-----CCHHHHHHHHHHHHHhcC
Confidence 3456777666554455566666 5677777665444444555555675444 4442 267788887776554433
Q ss_pred CeeEEEEecC-CCCCccCCCHHHHHHHHH
Q 013892 270 TVRALVVINP-GNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 270 ~~~~i~l~~p-~NPtG~~~~~~~l~~i~~ 297 (434)
+...++-+-. ..+.....+.++|+++.+
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 5665554422 112223445555555543
No 251
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=83.69 E-value=11 Score=34.26 Aligned_cols=99 Identities=14% Similarity=0.006 Sum_probs=60.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.+++.++.. ++-.+.
T Consensus 32 ~vlVTGas~GIG~aia~~l~-~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~-~~~~~i 104 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLH-ADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAIEAA-NQLGRL 104 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHH-TTSSEE
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHH-HHhCCC
Confidence 46666655444455566666 57888888766555556666667878888877643 788888888776 332245
Q ss_pred eEEEEecC-CCCCc-------cCCCHHHHHHHHH
Q 013892 272 RALVVINP-GNPTG-------QVLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p-~NPtG-------~~~~~~~l~~i~~ 297 (434)
..++.++. ..+.+ ...+.+++++..+
T Consensus 105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred CeEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 55554423 22222 2456666666554
No 252
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=83.52 E-value=5.3 Score=35.85 Aligned_cols=101 Identities=18% Similarity=0.069 Sum_probs=50.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-.......+..+.++..+.+|- -|.+.+++.++...++..+
T Consensus 8 k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLA-QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALAFAKQEFGH 81 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666555444445556666 5788887766554444455555566666776653 3678888877765444335
Q ss_pred eeEEEEecCCCCCcc------CCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTGQ------VLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~------~~~~~~l~~i~~ 297 (434)
...++-+-...+.+. ..+.+++++..+
T Consensus 82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 555544322222221 355677776654
No 253
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=82.95 E-value=10 Score=34.04 Aligned_cols=101 Identities=12% Similarity=0.045 Sum_probs=57.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-..... .++..|.++..+.+|- -|.+.+++.++...++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFA-KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAALDQ 86 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHH-HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 345565555444445556666 578888776654443333 3344577888887764 3778888777765444
Q ss_pred CCCeeEEEEecC-CCCCccCCCHHHHHHHHH
Q 013892 268 GITVRALVVINP-GNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~ 297 (434)
..+...++-+-. ..+.....+.++++++.+
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 335555554422 222222567777776554
No 254
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=82.78 E-value=8.9 Score=34.23 Aligned_cols=101 Identities=14% Similarity=0.044 Sum_probs=57.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|.+|++..-.-.......+..+.....+.+|- -|.+.+++.++...++..+
T Consensus 10 k~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLA-ERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666655444445556666 5788888776554445555555555566666653 3778888887765444335
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++-+-...+.+ ...+.++|+++.+
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 84 VDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554432222222 2346777776554
No 255
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=82.71 E-value=7.2 Score=35.42 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=56.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-..........+..+..+.+|- -|.+.+++.++...++..+.
T Consensus 7 ~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAV-AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHHHHHHHhCCCC
Confidence 45566555444445556666 5788888777665566666666677777777663 36778887777654433355
Q ss_pred eEEEEecCCCCCcc--CCCHHHHHHH
Q 013892 272 RALVVINPGNPTGQ--VLAEENQRAI 295 (434)
Q Consensus 272 ~~i~l~~p~NPtG~--~~~~~~l~~i 295 (434)
..|+-+-...+.+. ..+.++++++
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~ 106 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDL 106 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHH
Confidence 55554322222222 3455555443
No 256
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.65 E-value=6.5 Score=35.79 Aligned_cols=102 Identities=17% Similarity=0.065 Sum_probs=58.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC------------Chh---HHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------YPL---YSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~------------y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
..+++|.|+...-..+.+.|. ..|..|++.+-. -.. ....++..|.++..+.+|-. |.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~ 84 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLA-EEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR-----DRA 84 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT-----CHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC-----CHH
Confidence 345666555444455566666 578788775432 111 22234455778888877643 778
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHH
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~ 298 (434)
.+++.++...++..+...+|-+-...+.+...+.+++++..+.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 8888777654443356655544333333344677888776653
No 257
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=82.40 E-value=11 Score=34.27 Aligned_cols=100 Identities=8% Similarity=0.057 Sum_probs=61.8
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-+++|.|+...-..+.+.|. ..|-.|++.+-.-..... .++..|.++..+.+|-. |.+++++.++...++-
T Consensus 9 valVTGas~GIG~aiA~~la-~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFETY 82 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 34555544444344555566 578888876654443333 34556888988888743 7888888887765543
Q ss_pred CCeeEEEEecCC--CCCc--cCCCHHHHHHHHHH
Q 013892 269 ITVRALVVINPG--NPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 269 ~~~~~i~l~~p~--NPtG--~~~~~~~l~~i~~~ 298 (434)
.+... +++|.. .+.+ .-++.++|+++.++
T Consensus 83 G~iDi-LVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 83 SRIDV-LCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp SCCCE-EEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 35654 455553 3333 24688899888765
No 258
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=82.28 E-value=24 Score=34.29 Aligned_cols=107 Identities=13% Similarity=0.028 Sum_probs=57.3
Q ss_pred CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHH-HHHHHhcC-CCCEEEEcC----CC--------Ch---h
Q 013892 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHM-MMQLLIRS-ENDGILCPI----PQ--------YP---L 227 (434)
Q Consensus 165 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~-~l~~l~~~-~gd~Vlv~~----p~--------y~---~ 227 (434)
.+.|..+-.+.--+|....-.+. ....+++.+|++.+|-. +...|. . .|-.|++.. .. |. .
T Consensus 22 hp~gc~~~v~~qi~~~~~~~~~~-~~gKvaLVTGas~GIG~AiA~~LA-~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~ 99 (405)
T 3zu3_A 22 HPTGCEANVKKQIDYVTTEGPIA-NGPKRVLVIGASTGYGLAARITAA-FGCGADTLGVFFERPGEEGKPGTSGWYNSAA 99 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCT-TCCSEEEEESCSSHHHHHHHHHHH-HHHCCEEEEEECCCCCBTTBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCcC-CCCCEEEEeCcchHHHHHHHHHHH-HhcCCEEEEEeCCchhhhhhcccccchhHHH
Confidence 44565554444445655542222 23344444444455544 444555 5 677776532 11 11 1
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecC
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINP 279 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p 279 (434)
....++..|.++..+..|- .|.+.+++.++...++..+... +++|.
T Consensus 100 ~~~~~~~~G~~a~~i~~Dv-----td~~~v~~~v~~i~~~~G~IDi-LVNNA 145 (405)
T 3zu3_A 100 FHKFAAQKGLYAKSINGDA-----FSDEIKQLTIDAIKQDLGQVDQ-VIYSL 145 (405)
T ss_dssp HHHHHHHTTCCEEEEESCT-----TSHHHHHHHHHHHHHHTSCEEE-EEECC
T ss_pred HHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHHcCCCCE-EEEcC
Confidence 2334556788888888763 3788888888776655445654 44554
No 259
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=81.90 E-value=9.1 Score=34.63 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=59.1
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 187 PADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
......+++|.|+...-..+.+.|. ..|..|++..-.-.. ....++..|.++..+.+|-. |.+.+++.++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 99 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLA-SMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-----SESDFIEAIQ 99 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHH
Confidence 3444556676666554455666666 578777765542222 23344556778888877643 6778888777
Q ss_pred HHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 263 AAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++..+...++.+-...+.+ ...+.++++++.+
T Consensus 100 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 100 TIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 6544433566555442222222 2356666665543
No 260
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=81.72 E-value=13 Score=33.61 Aligned_cols=99 Identities=19% Similarity=0.123 Sum_probs=55.2
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|-. |.+.+++.++...++..
T Consensus 7 ~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 7 ILITGASGGIGEGIARELG-VAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT-----DRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEESSTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred EEEeCCccHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHcC
Confidence 4555544443344555566 5788888766544333333 3445788888877633 67888887776544433
Q ss_pred CeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 270 TVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
+...+|-+-...+.+. .++.++|+++.+
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5655554322222222 346677766554
No 261
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=81.71 E-value=18 Score=32.92 Aligned_cols=101 Identities=10% Similarity=0.073 Sum_probs=59.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh----------hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~----------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-. .....++..|.++..+.+|-. |.+.+++.
T Consensus 10 k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~ 83 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVAAA 83 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHH
Confidence 446666655544455566666 57878776543322 233445556888888887643 77888888
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
++...++..+...++-+-...+.+. ..+.++|+++.+
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7765444335665554422222222 457777776654
No 262
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=81.64 E-value=3.8 Score=41.44 Aligned_cols=114 Identities=17% Similarity=0.242 Sum_probs=72.3
Q ss_pred CCCCCCCEEEcCChHHHHHHHHHHHhc--CC---------C-C-----EEEEcCCCCh-------------------hHH
Q 013892 186 FPADPNDIFLTDGASPAVHMMMQLLIR--SE---------N-D-----GILCPIPQYP-------------------LYS 229 (434)
Q Consensus 186 ~~~~~~~i~~t~G~~~al~~~l~~l~~--~~---------g-d-----~Vlv~~p~y~-------------------~~~ 229 (434)
+.++++.|.++.+...++...++.|.. .. | . ..+...|.|+ .+.
T Consensus 126 L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~i 205 (525)
T 3gh5_A 126 LITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQI 205 (525)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHH
Confidence 345677888888777766666655531 11 1 1 2345557664 244
Q ss_pred HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 013892 230 ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLAD 309 (434)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 309 (434)
+.+..++.+...+.+.++.+|.+..+.+.+.-+. |... ......|..++++++++|++.|+++|+-||--
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~----Ga~~------~~~~~~~g~YT~~di~eIv~YA~~rgI~VIPE 275 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEI----GSKG------QVGGGPGGYYTQEQFKDIVSYAAERYIEVIPE 275 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchhhhhc----cCcc------ccCCCCCCCcCHHHHHHHHHHHHHcCCEEEEE
Confidence 4556678888888887777788776655443211 1111 11223467899999999999999999988753
No 263
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=81.56 E-value=16 Score=32.35 Aligned_cols=99 Identities=16% Similarity=0.020 Sum_probs=53.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.- ......++..|.++..+.+|-. |.+.+++.++...++..+
T Consensus 9 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~ 82 (249)
T 2ew8_A 9 LAVITGGANGIGRAIAERFA-VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS-----QPGDVEAFGKQVISTFGR 82 (249)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHHHHHcCC
Confidence 46666555444445556666 5787877654333 3333344556777777776633 677787777664433224
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
...++-+-...+.+ ...+.++++++.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~ 110 (249)
T 2ew8_A 83 CDILVNNAGIYPLIPFDELTFEQWKKTF 110 (249)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence 55555432222222 134666665544
No 264
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=81.19 E-value=5.4 Score=40.21 Aligned_cols=108 Identities=12% Similarity=0.252 Sum_probs=66.6
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHHhc----CC-CC-----EEEEcCCCCh-------------------hHHHHHHHcCC
Q 013892 187 PADPNDIFLTDGASPAVHMMMQLLIR----SE-ND-----GILCPIPQYP-------------------LYSASIALHGG 237 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~al~~~l~~l~~----~~-gd-----~Vlv~~p~y~-------------------~~~~~~~~~g~ 237 (434)
.++.+.|.++.....++...++.|.. +. |. ..+...|.|+ .+.+.+..++.
T Consensus 97 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~Kl 176 (507)
T 2gjx_A 97 TINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKL 176 (507)
T ss_dssp EESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTC
T ss_pred EEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 45667788887776666666555531 11 21 2334446654 23344555677
Q ss_pred eEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 238 TLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
++..+.+.++.+|.+..+.+.+.-+. | . ..|.|..++.+++++|++.|+++|+-||-
T Consensus 177 N~lh~HltDdq~wr~ei~~~P~Lt~~----G-a---------~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 177 NVFHWHLVDDPSFPYESFTFPELMRK----G-S---------YNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCTHHHHH----H-S---------SCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEecccCeeeeccccchhhhc----c-c---------cCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 77777776666777665433332111 0 0 12446789999999999999999998885
No 265
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=81.01 E-value=17 Score=32.41 Aligned_cols=100 Identities=16% Similarity=0.020 Sum_probs=55.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+..|- -|.+.+++.++...++..+.
T Consensus 8 ~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 8 VALVTGGASGVGLEVVKLLL-GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCSC
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 45566554444445555666 5788888776554444444444566677776653 36778877776654332245
Q ss_pred eEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 272 RALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..++-+-...+.+ ...+.++++++.+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5555432222222 1346666665544
No 266
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=80.83 E-value=15 Score=32.64 Aligned_cols=81 Identities=20% Similarity=0.014 Sum_probs=47.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.+++.++...++..+
T Consensus 13 k~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLV-GQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT-----SEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHHCCC
Confidence 346666555444455556666 57877776554434444555555767777776633 677787777654433224
Q ss_pred eeEEEEe
Q 013892 271 VRALVVI 277 (434)
Q Consensus 271 ~~~i~l~ 277 (434)
..+||-+
T Consensus 87 id~li~~ 93 (265)
T 2o23_A 87 VDVAVNC 93 (265)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 5555544
No 267
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=80.80 E-value=9.7 Score=34.51 Aligned_cols=102 Identities=15% Similarity=0.091 Sum_probs=56.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
...+++|.|+...-..+.+.|. ..|..|++..- .-.. ....++..|.++..+.+|-. |.+.+++.++...
T Consensus 28 ~k~vlVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELA-AAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS-----QESEVEALFAAVI 101 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 3445666555444445566666 57888876443 2222 22334455778888877643 7788888777654
Q ss_pred hcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
++..+...++-+-...+.+ ...+.++++++.+
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4433555555432222222 2356677776654
No 268
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=80.44 E-value=11 Score=34.30 Aligned_cols=99 Identities=20% Similarity=0.183 Sum_probs=57.5
Q ss_pred CEEEcCChHHHH-HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 192 ~i~~t~G~~~al-~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
.+++.+|++.+| ..+.+.|. ..|-.|++..-.-.......+..+.++..+.+|-. |.+.+++.++...++..+
T Consensus 29 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALA-GAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT-----DPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTT-----SHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 444444444554 44555666 57888887766555566666666767777776633 677888877765444335
Q ss_pred eeEEEEecCC--CCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPG--NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~--NPtG--~~~~~~~l~~i~~ 297 (434)
...+| +|.. .+.+ ..++.++|+++.+
T Consensus 103 iD~lV-nnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 103 VDVLF-NNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CCEEE-ECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCChhhCCHHHHHHHHH
Confidence 55544 4442 2212 2356677766554
No 269
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=80.42 E-value=12 Score=33.87 Aligned_cols=100 Identities=9% Similarity=-0.020 Sum_probs=58.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+.+|- -|.+.+++.++...++..+
T Consensus 12 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLA-RAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666655444445566666 5788888776555556666666677777776653 3677888777765443334
Q ss_pred eeEEEEecCC-C-C-Cc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPG-N-P-TG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~-N-P-tG--~~~~~~~l~~i~~ 297 (434)
...++ +|.. . + .+ ..++.++|++..+
T Consensus 86 id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 86 LDIVD-NNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCEEE-ECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCCccccCCHHHHHHHHH
Confidence 55544 4432 2 2 11 1456677766543
No 270
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=80.27 E-value=17 Score=32.89 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=56.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-........ ..|.++..+.+|-. |.+.+++.++...++
T Consensus 29 ~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFM-RHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALKE 102 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 45666555444455566666 678888876655443333322 24778888877643 678888877765444
Q ss_pred CCCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++ +|.. ...+ ..++.++|+++.+
T Consensus 103 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 103 FGRIDILI-NCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCcCCCCCCcccCCHHHHHHHHH
Confidence 33565554 4432 2212 2356777776654
No 271
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=80.03 E-value=17 Score=33.34 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=56.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---cC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---HG-GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-.......+. .| .++..+.+|- -|.+.+++.++...+
T Consensus 42 k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFA-RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVVD 115 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 345565555444445556666 5787887766554444443333 33 5677777663 377888877776544
Q ss_pred cCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
+..+...+|-+-...+.+. .++.++|+++.+
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4335555554322222222 456777776655
No 272
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=79.99 E-value=17 Score=33.44 Aligned_cols=101 Identities=11% Similarity=0.079 Sum_probs=56.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC------------Chh---HHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------YPL---YSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~------------y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
..+++|.|+...-..+.+.|. ..|..|++.+-. -.. ....++..|.++..+.+|-. |.+
T Consensus 29 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~ 102 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLA-REGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR-----DFD 102 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC-----CHH
Confidence 345666555444445556666 578888765422 111 22234456788888887743 778
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCc---cCCCHHHHHHHHH
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTG---QVLAEENQRAIVD 297 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG---~~~~~~~l~~i~~ 297 (434)
.+++.++...++..+...+|.+-...+.+ ..++.++|+++.+
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 88888776544433565554442222222 2357777777665
No 273
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=79.96 E-value=17 Score=32.85 Aligned_cols=100 Identities=11% Similarity=0.100 Sum_probs=58.3
Q ss_pred CEEEcCChHHHH-HHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQYP--LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al-~~~l~~l~~~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++.+|++.+| ..+...|. ..|-.|++..-.-. .....+...|.+...+.+|-. |.+++++.+++..++-
T Consensus 8 KvalVTGas~GIG~aia~~la-~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLA-EERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIATF 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHHHh
Confidence 344444444555 44455666 57776666543222 233445556777888877633 6778887777655443
Q ss_pred CCeeEEEEecC--CCCCccCCCHHHHHHHHHH
Q 013892 269 ITVRALVVINP--GNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 269 ~~~~~i~l~~p--~NPtG~~~~~~~l~~i~~~ 298 (434)
.+...+ ++|. +.+.....+.++|+++.++
T Consensus 82 G~iDiL-VNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 82 GRLDGL-VNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp SCCCEE-EECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCCccCCHHHHHHHHHH
Confidence 356544 4554 3344456778888877654
No 274
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=79.62 E-value=25 Score=31.36 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=56.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++. ...-..... .++..|.++..+.+|- -|.+.+++.++...+
T Consensus 9 k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-----TNAAEVEAAISAAAD 82 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 346666555444455556666 578887765 444333332 2334577777777663 367888888776544
Q ss_pred cCCCeeEEEEecCCC-CCcc--CCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGN-PTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~N-PtG~--~~~~~~l~~i~~ 297 (434)
+..+...++-+-... +.+. ..+.++|+++.+
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 433565554432222 2222 456777777654
No 275
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=79.28 E-value=26 Score=31.32 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=57.4
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC---hhH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY---PLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y---~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.- ... ...++..|.++..+.+|-. |.+.+++.++.
T Consensus 11 ~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 84 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFA-LESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS-----NEEEVAKLFDF 84 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHT-TSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC-----SHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 3446666655544455566666 6788887743211 112 2233345788888887743 77888888776
Q ss_pred HHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..++..+...++-+-...+.+. ..+.++|+++.+
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 120 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDT 120 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5444335665544322222222 356777777665
No 276
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=78.85 E-value=21 Score=31.94 Aligned_cols=100 Identities=13% Similarity=0.009 Sum_probs=56.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... +...|.++..+.+|-. |.+.+++.++...++.
T Consensus 31 ~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLG-SLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAAH 104 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHhc
Confidence 45555555444444555566 5788888776554443333 3345778888877643 6788888777654443
Q ss_pred CCeeEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 269 ITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
.+...|+.+-.. .+.|. ..+.++++++.+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 356655544222 22222 356666666543
No 277
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=78.74 E-value=16 Score=33.16 Aligned_cols=100 Identities=19% Similarity=0.083 Sum_probs=55.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...++.
T Consensus 26 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLA-ARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVERF 99 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 45555555444445556666 5788888766544433333 333477788877763 37788888777654443
Q ss_pred CCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.+...++-+-...+.+ ...+.++++++.+
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3555544432222222 2356677766544
No 278
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=78.71 E-value=20 Score=32.30 Aligned_cols=101 Identities=19% Similarity=0.128 Sum_probs=54.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI----ALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-....... +..|.++..+.+|-. |.+.+++.++...+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLA-EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLLEAVKE 95 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345666555444445556666 57888877654433333332 233777777776633 67788777766443
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
+..+...++-+-.....+ ...+.++++++.+
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 322455555432222222 2346677766554
No 279
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=78.57 E-value=13 Score=33.51 Aligned_cols=99 Identities=18% Similarity=0.088 Sum_probs=59.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|++..-..+.+.|. ..|-+|++.+-.-...... ...+.++..+..|- -|.+++++.++...++-.+.
T Consensus 4 ~vlVTGas~GIG~aia~~la-~~Ga~V~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADF-AKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHH-HTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHH-HHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 35666666555555566666 6888888776543333332 33456677777663 37788888887765543356
Q ss_pred eEEEEecC-CCCCcc--CCCHHHHHHHHHH
Q 013892 272 RALVVINP-GNPTGQ--VLAEENQRAIVDF 298 (434)
Q Consensus 272 ~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 298 (434)
..++ +|. .++.+. .++.++|+++.++
T Consensus 77 DiLV-NNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 77 DVLV-NNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CEEE-ECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 6544 444 333332 4577888887764
No 280
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=78.55 E-value=22 Score=32.14 Aligned_cols=102 Identities=11% Similarity=0.012 Sum_probs=57.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC----------hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY----------PLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y----------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.- ......++..|.++..+.+|-. |.+.+++
T Consensus 6 ~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~ 79 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAA-RDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EEDQVRA 79 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHH-HCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHH
Confidence 3446666655444445556666 5787777654322 2233344556888888887743 7788888
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.++...++..+...++-+-.....+ ...+.++|+++.+
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 7776544433555554432222122 2356677776543
No 281
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=78.47 E-value=11 Score=34.18 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=56.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..- .-.. ....++..|.++..+.+|-. |.+.+++.++...+
T Consensus 19 k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR-----QVPEIVKLFDQAVA 92 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345555555444445556666 57888876432 2222 23334556788888887643 77888888776544
Q ss_pred cCCCeeEEEEecC-CCCCcc--CCCHHHHHHHHHH
Q 013892 267 KGITVRALVVINP-GNPTGQ--VLAEENQRAIVDF 298 (434)
Q Consensus 267 ~g~~~~~i~l~~p-~NPtG~--~~~~~~l~~i~~~ 298 (434)
+..+...++ +|. ..+.+. .++.++|+++.+.
T Consensus 93 ~~g~id~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 93 HFGHLDIAV-SNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHSCCCEEE-CCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 433555544 443 222222 3477777776653
No 282
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=78.30 E-value=26 Score=30.83 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=51.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-..... .++..+.++..+..|- -|.+.+++.++...++
T Consensus 12 ~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFA-TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFAISK 85 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-TTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHh
Confidence 456666555444445556666 578788776543332222 2333466777776653 3678888877654433
Q ss_pred CCCeeEEEEecCC-CCCccCCCHHHHHH
Q 013892 268 GITVRALVVINPG-NPTGQVLAEENQRA 294 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG~~~~~~~l~~ 294 (434)
..+...|+.+-.. .+.....+.+++++
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~ 113 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRR 113 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHH
Confidence 2256665544221 22112345555544
No 283
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=77.38 E-value=35 Score=30.84 Aligned_cols=98 Identities=11% Similarity=0.074 Sum_probs=52.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+..|- -|.+.+++.++...+..
T Consensus 46 ~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLA-KSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVINKILTEH 119 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHT-TTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHC
T ss_pred EEEEECCCcHHHHHHHHHHH-HcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHHHHHHHhc
Confidence 45666555444445555666 6788887754222222222 233467777777663 37788888887654443
Q ss_pred CCeeEEEEecCCCCCc--cCCCHHHHHHH
Q 013892 269 ITVRALVVINPGNPTG--QVLAEENQRAI 295 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG--~~~~~~~l~~i 295 (434)
.+...||-+-...+.+ ...+.++++++
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~ 148 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDV 148 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHH
Confidence 3566555442222222 12455555544
No 284
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=77.37 E-value=21 Score=32.17 Aligned_cols=99 Identities=13% Similarity=0.084 Sum_probs=54.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC------------ChhH---HHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------YPLY---SASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~------------y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
..+++|.|+...-..+.+.|. ..|..|++.+-. -... ...+...|.++..+.+|-. |.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~ 87 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLA-ADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVR-----DRE 87 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTT-----CHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCC-----CHH
Confidence 346666655444445566666 578787765422 1111 2233445778888887643 778
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
.+++.++...++..+...+|-+-...+.+. +.++++++.+
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 888887765444335655544322222222 5666766544
No 285
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=77.28 E-value=14 Score=32.98 Aligned_cols=100 Identities=11% Similarity=0.003 Sum_probs=53.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---c--C-CeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H--G-GTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~--g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+. . + .++..+.+|- -|.+.+++.++...
T Consensus 9 ~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 9 LAIITGASQGIGAVIAAGLA-TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDIH 82 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHHH
Confidence 45555555444445555666 5787888766554444333332 1 3 5566666663 36788888777654
Q ss_pred hcCCCeeEEEEecCC-CCCccCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPG-NPTGQVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~-NPtG~~~~~~~l~~i~~ 297 (434)
++..+...++-+-.. .+.....+.+++++..+
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 443356655544222 22222445566665443
No 286
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=77.27 E-value=23 Score=31.36 Aligned_cols=101 Identities=14% Similarity=0.063 Sum_probs=54.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 8 k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 8 KVALITGASSGIGEATARALA-AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA-----DRQGVDAAVASTVEA 81 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 346666655444445556666 5787877765433333222 2234667777776633 678888777765433
Q ss_pred CCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..+...++-+-...+.+. ..+.++++++.+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 224555554422222222 346666665543
No 287
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=77.24 E-value=20 Score=32.94 Aligned_cols=101 Identities=13% Similarity=0.027 Sum_probs=56.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|-. |.+.+++.++...++
T Consensus 32 k~vlVTGas~gIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFA-RRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR-----HLDEMVRLADEAFRL 105 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHh
Confidence 346666555444445555666 5788888766554444333 3344777888777643 778888877765444
Q ss_pred CCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..++..+|-+-.....|. ..+.++++++.+
T Consensus 106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 335555554322222222 356676666543
No 288
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=77.21 E-value=12 Score=34.09 Aligned_cols=100 Identities=17% Similarity=0.147 Sum_probs=55.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC----------------ChhHH---HHHHHcCCeEEEEecCCCCCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ----------------YPLYS---ASIALHGGTLVPYYLDEATGWG 251 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~----------------y~~~~---~~~~~~g~~~~~~~~~~~~~~~ 251 (434)
..+++|.|+...-..+.+.|. ..|..|++.+-. -.... ..++..|.++..+.+|-.
T Consensus 12 k~~lVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~---- 86 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLA-QEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR---- 86 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT----
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC----
Confidence 345666655544455566666 578888765322 11122 223345777888877643
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEecCC-CCCcc---CCCHHHHHHHHH
Q 013892 252 LETSEVKKQLEAAKAKGITVRALVVINPG-NPTGQ---VLAEENQRAIVD 297 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g~~~~~i~l~~p~-NPtG~---~~~~~~l~~i~~ 297 (434)
|.+.+++.++...++..+...+| +|.. .+.+. ..+.++|+++.+
T Consensus 87 -~~~~v~~~~~~~~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 87 -DYDALKAAVDSGVEQLGRLDIIV-ANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp -CHHHHHHHHHHHHHHHSCCCEEE-ECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHhCCCCEEE-ECCcccCCCCccccCCHHHHHHHHH
Confidence 77888887776544433555544 4442 22222 346777776654
No 289
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=77.07 E-value=31 Score=32.55 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=56.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh----------hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP----------LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~----------~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 261 (434)
.++||.|+...-..+.+.|. ..|-.|++..-.-. .....++..|.++..+.+|-. |.+.+++.+
T Consensus 47 ~vlVTGas~GIG~aia~~La-~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~ 120 (346)
T 3kvo_A 47 TVFITGASRGIGKAIALKAA-KDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQISAAV 120 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHH-TTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHHHHH-HCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHHH
Confidence 45555555443344555666 57877776543221 234445667888888887643 788888888
Q ss_pred HHHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 262 EAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
+...++..++..||-+-.....+ ...+.++++++.+
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 76654433565555442222212 2356677766543
No 290
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=77.05 E-value=29 Score=31.47 Aligned_cols=101 Identities=13% Similarity=-0.005 Sum_probs=56.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.- ......... .+.++..+.+|- -|.+.+++.++...
T Consensus 26 k~~lVTGas~GIG~~ia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLA-KAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMVA 99 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHHH
Confidence 346666665554455566666 5788888766432 222222222 266777777663 37788888887765
Q ss_pred hcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
++..+...++-+-...+.+. ..+.++|+++.+
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55435665554422222222 346677766544
No 291
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=76.85 E-value=25 Score=31.17 Aligned_cols=99 Identities=14% Similarity=0.083 Sum_probs=52.7
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...++..
T Consensus 5 vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLV-KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHHTT
T ss_pred EEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 5565554443444555566 5787877765432222222 233466777777663 367888888876544433
Q ss_pred CeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 270 TVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
+...++-+-...+.+. ..+.++++++.+
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5655554322222221 245666655443
No 292
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=76.75 E-value=14 Score=33.38 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=55.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-------------CChhHH---HHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-------------QYPLYS---ASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-------------~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
..+++|.|+...-..+.+.|. ..|..|++.+- .-.... ..+...+.++..+.+|-. |.
T Consensus 12 k~~lVTGas~GIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~ 85 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMA-AEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR-----DF 85 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CH
T ss_pred CEEEEECCccHHHHHHHHHHH-HcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CH
Confidence 345666555444455556666 57888877532 111222 233445778888877643 78
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
+.+++.++...++..+...++-+-...+.+. ..+.++++++.+
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 8888887765444335655544322222222 456777776654
No 293
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=76.65 E-value=25 Score=31.26 Aligned_cols=99 Identities=17% Similarity=0.054 Sum_probs=52.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHHHHHH---c-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL-YSASIAL---H-GGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~-~~~~~~~---~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.. .....+. . |.++..+.+|-. |.+.+++.++...+
T Consensus 6 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALA-AQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS-----KGEAVRGLVDNAVR 79 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTT-----SHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 45566555444445555666 578888876654433 3333222 2 667777766533 67778777766443
Q ss_pred cCCCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
+..+...++ +|.. .+.+ ...+.++++++.+
T Consensus 80 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILV-NNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 322455554 4432 2222 2246666665443
No 294
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=76.60 E-value=24 Score=31.39 Aligned_cols=100 Identities=15% Similarity=0.157 Sum_probs=55.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-......... .+.++..+.+|-. |.+.+++.++...++.
T Consensus 8 ~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFA-KEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR-----NTDDIQKMIEQIDEKF 81 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 45555554443344555666 5788888766544444433333 3667777777633 6788888777654443
Q ss_pred CCeeEEEEecCC-CCCc--cCCCHHHHHHHHHH
Q 013892 269 ITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 269 ~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~~ 298 (434)
.+...++ +|.. .+.+ ..++.++|+++.+.
T Consensus 82 g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 82 GRIDILI-NNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp SCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3555554 4432 2111 24567777766543
No 295
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=76.49 E-value=26 Score=31.67 Aligned_cols=101 Identities=9% Similarity=-0.006 Sum_probs=56.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC------------Chh---HHHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------YPL---YSASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~------------y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
..+++|.|+...-..+.+.|. ..|..|++..-. -.. ....++..|.++..+.+|-. |.+
T Consensus 11 k~~lVTGas~gIG~a~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~ 84 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALA-EAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK-----DRA 84 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHH
Confidence 345666555444445566666 578787765432 111 22234456778888877643 778
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.+++.++...++..+...++-+-...+.+ ...+.++|+++.+
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 88888776544433566555432222222 2356777776544
No 296
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=76.41 E-value=18 Score=32.32 Aligned_cols=99 Identities=14% Similarity=0.016 Sum_probs=52.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.++..+.+|-. |.+.+++.++...++..+.
T Consensus 7 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 7 TVIITGGARGLGAEAARQAV-AAGARVVLADVLDEEGAATARELGDAARYQHLDVT-----IEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 45666555444445556666 57888877654433344444444656666666532 6777777776544332245
Q ss_pred eEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 272 RALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 272 ~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
..++-+-...+.+ ...+.++++++.
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~ 107 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVV 107 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 5555432212222 134666665443
No 297
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=76.36 E-value=18 Score=33.57 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=54.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC----------Ch---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ----------YP---LYSASIALHGGTLVPYYLDEATGWGLETSEVK 258 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~----------y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 258 (434)
.+++|.|+...-..+.+.|. ..|..|++.+-. -. .....+...|.++..+.+|- -|.+.++
T Consensus 29 ~vlVTGas~GIG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~ 102 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFA-AEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQAA 102 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHH
Confidence 45555555443444555666 578888876432 12 23334455678888887764 3778888
Q ss_pred HHHHHHHhcCCCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 259 KQLEAAKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 259 ~~l~~~~~~g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
+.++...++..+...+| +|.. ...+ ...+.++++++.+
T Consensus 103 ~~~~~~~~~~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLV-NNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHSCCCEEE-CCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 87776544433455444 4442 2222 2356677666543
No 298
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.32 E-value=24 Score=31.62 Aligned_cols=101 Identities=6% Similarity=0.008 Sum_probs=58.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-...... +...|.++..+.+|-. |.+.+++.++...++
T Consensus 12 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCA-EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMKA 85 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 346666655544455556666 5788888776554433333 3345778888877643 788888888776554
Q ss_pred CCCeeEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
..+...++-+-.. .+.+. ..+.++++++.+
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 4356655543212 12222 456677776554
No 299
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=76.23 E-value=25 Score=31.36 Aligned_cols=100 Identities=9% Similarity=-0.004 Sum_probs=55.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|-.|++. ...-...... ++..|.++..+.+|-. |.+.+++.++...++
T Consensus 6 ~vlVTGas~gIG~aia~~l~-~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLA-ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG-----QPAKIKEMFQQIDET 79 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 35555555444445555666 578887764 4443333332 3345778888877643 778888887765444
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++-+-...+.+ ...+.++|+++.+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 33555555442222222 2356677766554
No 300
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=76.19 E-value=30 Score=31.23 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=58.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 188 ADPNDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
.....+++|.|+...-..+.+.|. ..|..|++. ...-.. ....++..|.++..+.+|- -|.+.+++.++.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN-----RDAEAIEQAIRE 102 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHH
Confidence 334456666655544455566666 578787765 322222 2233445588888888764 377888888776
Q ss_pred HHhcCCCeeEEEEecCC-CCCc--cCCCHHHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~~ 298 (434)
..++..+...+| +|.. ...+ ...+.++|+++.+.
T Consensus 103 ~~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 103 TVEALGGLDILV-NSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCcEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 544433555554 4432 1112 23467777776543
No 301
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=76.14 E-value=15 Score=33.50 Aligned_cols=82 Identities=18% Similarity=0.128 Sum_probs=51.9
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-..........+.++..+.+|- -|.+.+++.++...++..+
T Consensus 6 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFV-AEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV-----RSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-----CCHHHHHHHHHHHHHhcCC
Confidence 346666665544455566666 5788888877665556666666777888887763 3677887777765443334
Q ss_pred eeEEEEecC
Q 013892 271 VRALVVINP 279 (434)
Q Consensus 271 ~~~i~l~~p 279 (434)
...++ +|.
T Consensus 80 iD~lv-nnA 87 (281)
T 3zv4_A 80 IDTLI-PNA 87 (281)
T ss_dssp CCEEE-CCC
T ss_pred CCEEE-ECC
Confidence 55444 443
No 302
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=75.76 E-value=28 Score=31.12 Aligned_cols=103 Identities=16% Similarity=0.073 Sum_probs=57.1
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCC-eEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGG-TLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-.......+. .+. ++..+.+|- -|.+.+++.++..
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLL-EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEAC 81 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHHH
Confidence 3446666655544455566666 5788888766544433333222 333 477777663 3677787777765
Q ss_pred HhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHHH
Q 013892 265 KAKGITVRALVVINPGNPTGQ--VLAEENQRAIVDF 298 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~~ 298 (434)
.++..+...++-+-...+.+. ..+.++|++..+.
T Consensus 82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444335555544322222222 4567777776654
No 303
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=75.69 E-value=4.3 Score=40.96 Aligned_cols=112 Identities=16% Similarity=0.277 Sum_probs=67.2
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHHhc--CC---------CC-----EEEEcCCCCh-------------------hHHHH
Q 013892 187 PADPNDIFLTDGASPAVHMMMQLLIR--SE---------ND-----GILCPIPQYP-------------------LYSAS 231 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~al~~~l~~l~~--~~---------gd-----~Vlv~~p~y~-------------------~~~~~ 231 (434)
.++.+.|.++.+...++...++.|.. .. +. ..+...|.|+ .+.+.
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id~ 182 (512)
T 1jak_A 103 DSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDR 182 (512)
T ss_dssp EEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHHH
Confidence 34566788887766666555555421 11 11 2344556664 23344
Q ss_pred HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 232 IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 232 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+..++.+...+.+.++.+|.+.++.+.+.-+. |... ......|..++.+++++|++.|+++|+-||-
T Consensus 183 ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~----ga~~------~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 183 VARYKYNKLHLHLSDDQGWRIAIDSWPRLATY----GGST------EVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT----TTSC------CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEEEEeccCCCceehhhhhHHHHhh----cCcc------ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 55567777777777666777765554432211 1110 1122336789999999999999999998885
No 304
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=75.69 E-value=26 Score=30.95 Aligned_cols=101 Identities=15% Similarity=0.096 Sum_probs=56.5
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
...+++|.|+...-..+.+.|. ..|-.|++..-.-...... ++..+.++..+.+|-. |.+.+++.++...+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALA-REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS-----DPESAKAMADRTLA 82 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 3446666655544455556666 5787887766544433333 3344778888877643 67788877776544
Q ss_pred cCCCeeEEEEecCCC----CCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGN----PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~N----PtG--~~~~~~~l~~i~~ 297 (434)
+..+...++ +|..- +.+ ...+.+++++..+
T Consensus 83 ~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 83 EFGGIDYLV-NNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHSCCCEEE-ECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 333555554 44321 111 1346666665543
No 305
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=75.44 E-value=10 Score=38.16 Aligned_cols=108 Identities=7% Similarity=0.158 Sum_probs=66.0
Q ss_pred CCCCCCCEEEcCChHHHHHHHHHHHhc----CC-CCE-----EEEcCCCCh-------------------hHHHHHHHcC
Q 013892 186 FPADPNDIFLTDGASPAVHMMMQLLIR----SE-NDG-----ILCPIPQYP-------------------LYSASIALHG 236 (434)
Q Consensus 186 ~~~~~~~i~~t~G~~~al~~~l~~l~~----~~-gd~-----Vlv~~p~y~-------------------~~~~~~~~~g 236 (434)
+.++.+.|.++.....++...++.|.. +. |.. .+...|.|+ .+.+.+..++
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~K 181 (507)
T 1now_A 102 LLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNK 181 (507)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTT
T ss_pred EEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhC
Confidence 345667788887776666666555531 11 111 234446653 2334455567
Q ss_pred CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 237 GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
.+...+.+.++.+|.+..+.+.+.-+. | .- .| |..++.+++++|++.|+++|+-||-
T Consensus 182 lN~lh~HltDdq~wr~e~~~~P~Lt~~----G-a~---------~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 182 FNVLHWHIVDDQSFPYQSITFPELSNK----G-SY---------SL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCHHHHHH----H-SS---------ST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEeeccCccceeeccchhhhhcc----c-Cc---------CC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 777777776666677665433332211 0 00 12 6789999999999999999998884
No 306
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=75.41 E-value=16 Score=32.32 Aligned_cols=100 Identities=12% Similarity=0.063 Sum_probs=55.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.- .. ....++..|.++..+..|- -|.+.+++.++...++
T Consensus 6 ~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLA-EEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 45666555444445556666 5788887643322 22 2233445677888887763 3778888877765444
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++-+-...+.+ ...+.++|+++.+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 33565555442222222 2346677766543
No 307
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=75.41 E-value=28 Score=30.82 Aligned_cols=100 Identities=15% Similarity=0.106 Sum_probs=54.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++.. ..-. .....++..+.++..+..|- -|.+.+++.++...++
T Consensus 15 ~vlITGas~giG~~ia~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 15 IAYVTGGMGGIGTSICQRLH-KDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAFDKVKAE 88 (256)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHHHHHHHh
Confidence 45555544443344555666 5787776632 2222 23344455677777777663 3778888888776555
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++.+-...+.+ ...+.+++++..+
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 44566555442222222 2356666665544
No 308
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=75.18 E-value=23 Score=31.81 Aligned_cols=101 Identities=10% Similarity=-0.037 Sum_probs=53.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+. .|.++..+.+|-. |.+.+++.++...+
T Consensus 21 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFA-AAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAAE 94 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 345555555444445556666 5788888766544433333222 5777888777643 45566665554433
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
+..+...++-+-.....+ ...+.++|++..+
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 322566555442222112 2356677766544
No 309
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=75.10 E-value=28 Score=31.74 Aligned_cols=100 Identities=14% Similarity=0.094 Sum_probs=57.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.. ....++..|.++..+..|-. |.+.+++.++...+
T Consensus 48 k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS-----DEQHCKDIVQETVR 121 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 346666655544455566666 578887766543332 22334456778888877643 77888887776544
Q ss_pred cCCCeeEEEEecCC--CCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~--NPtG--~~~~~~~l~~i~~ 297 (434)
+..+...+| +|.. .+.+ ..++.++++++.+
T Consensus 122 ~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 122 QLGSLNILV-NNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp HHSSCCEEE-ECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCcCCCCCcccCCHHHHHHHHH
Confidence 433565554 4432 2222 1246777777665
No 310
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=74.96 E-value=33 Score=30.96 Aligned_cols=100 Identities=16% Similarity=0.009 Sum_probs=53.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...++.
T Consensus 24 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLG-KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALVAAVVERY 97 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 46666555444445555666 5787777655433322222 233477777777663 36788888777654443
Q ss_pred CCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.+...+|-+-...+.+ ...+.++++++.+
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3565555432222222 1346666665544
No 311
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=74.67 E-value=29 Score=32.13 Aligned_cols=101 Identities=14% Similarity=0.070 Sum_probs=55.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC------------ChhH---HHHHHHcCCeEEEEecCCCCCCCCCHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ------------YPLY---SASIALHGGTLVPYYLDEATGWGLETS 255 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~------------y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~ 255 (434)
..+++|.|+...-..+.+.|. ..|..|++.+-. -... ...++..|.++..+.+|-. |.+
T Consensus 47 k~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~ 120 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLA-QDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR-----DLA 120 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHH
Confidence 345555555444445556666 578887765322 1112 2233456778888887643 778
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.+++.++...++..+...+|-+-.....+ ..++.++|+++.+
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 88887776544433565554432222222 2456777776654
No 312
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=74.66 E-value=30 Score=30.78 Aligned_cols=99 Identities=16% Similarity=0.078 Sum_probs=52.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---c-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H-GGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+. . |.++..+.+|-. |.+.+++.++...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFA-KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA-----TPEGVDAVVESVRS 81 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 346666655444455556666 5787887765432222222222 2 667777776633 67788777765443
Q ss_pred cCCCeeEEEEecCC-CCCc--cCCCHHHHHHHH
Q 013892 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIV 296 (434)
Q Consensus 267 ~g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~ 296 (434)
...+...++ +|.. .+.+ ...+.+++++..
T Consensus 82 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~ 113 (263)
T 3ai3_A 82 SFGGADILV-NNAGTGSNETIMEAADEKWQFYW 113 (263)
T ss_dssp HHSSCSEEE-ECCCCCCCCCTTTCCHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHH
Confidence 322455555 4332 1112 124566665543
No 313
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=74.62 E-value=22 Score=31.76 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=55.6
Q ss_pred CCEEEcCCh-HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc----CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGA-SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~-~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+ ...-..+.+.|. ..|..|++..-.-.......+.. +.++..+.+|-. |.+.+++.++...
T Consensus 23 k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 96 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQTV 96 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHHH
Confidence 456677664 333344445555 57888887665544444433332 356777777643 6788888777654
Q ss_pred hcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
++..+...+|.+-...+.+. ..+.+++++..+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 44335665554422222222 346677766554
No 314
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=74.47 E-value=23 Score=31.31 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=50.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..|.. .+.+|- -|.+.+++.++...++..+.
T Consensus 7 ~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~D~-----~~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFA-KEGARLVACDIEEGPLREAAEAVGAH--PVVMDV-----ADPASVERGFAEALAHLGRL 78 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTTTCE--EEECCT-----TCHHHHHHHHHHHHHHHSSC
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHcCCE--EEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 45666555444445555666 57888877654433334444444643 344442 26777777776644332246
Q ss_pred eEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 272 RALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..++-+-...+.+ ...+.++++++.+
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5555332222222 2346677766554
No 315
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=74.24 E-value=16 Score=32.00 Aligned_cols=100 Identities=11% Similarity=0.016 Sum_probs=55.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA----LHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+ ..|.++..+.+|-. |.+.+++.++...++
T Consensus 4 ~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALA-RDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS-----KAESVEEFSKKVLER 77 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHCC-HHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccC-----CHHHHHHHHHHHHHh
Confidence 35666655444445556666 578888776655443333322 45778888877643 677887776654333
Q ss_pred CCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..+...++.+-...+.+. ..+.+++++..+
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 225655554422222222 346676766543
No 316
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=73.99 E-value=34 Score=31.03 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=54.2
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+...|. ..|..|++..-.-.......+. .+.++..+..|- -|.+.+++.++...+
T Consensus 27 k~vlITGasggiG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLS-SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIK 100 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHH
Confidence 346666555444445556666 5787887765443333332222 166777777663 377888888877544
Q ss_pred cCCCeeEEEEecCCCCCcc--CCCHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTGQ--VLAEENQRAIV 296 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~ 296 (434)
...+...|+-+-.....+. ..+.+++++..
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 132 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTIT 132 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHH
Confidence 4435666554422221111 34556555443
No 317
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=73.97 E-value=43 Score=29.69 Aligned_cols=100 Identities=14% Similarity=0.035 Sum_probs=55.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELA-SLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS-----SRSERQELMNTVANH 83 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 456666665544455556666 5787887755432222222 2334777777777633 678888877765443
Q ss_pred C-CCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 268 G-ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g-~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
. .+...++ +|.. .+.+ ...+.++++++.+
T Consensus 84 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 84 FHGKLNILV-NNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp TTTCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 2565554 4332 2222 2356667766543
No 318
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=73.68 E-value=17 Score=32.84 Aligned_cols=101 Identities=13% Similarity=0.054 Sum_probs=55.2
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC-------------Chh---HHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-------------YPL---YSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~-------------y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
..+++|.|+...-..+.+.|. ..|-.|++.+-. -.. ....++..|.++..+.+|- -|.
T Consensus 16 k~~lVTGas~gIG~a~a~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~ 89 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLA-AEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV-----RDD 89 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-----TCH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCH
Confidence 345666555444445556666 578888775421 111 2223344577888887763 377
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 255 SEVKKQLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 255 ~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
+.+++.++...++..+...+|-+-.....+. .++.++|+++.+
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 8888887765444335655554422222222 346777766543
No 319
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=73.67 E-value=23 Score=32.12 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=57.1
Q ss_pred CCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 189 DPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 189 ~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
....+++|.|+...-..+.+.|. ..|..|++..-.-... ...++..|.++..+.+|-. |.+.+++.++...
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYA-EAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT-----QPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 33456666655544455556666 5787887765443332 2334445667777777633 6788888777654
Q ss_pred hcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
++..+...+|-+-.....+ ...+.++|+++.+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4433565555442222222 2356777765543
No 320
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=73.60 E-value=32 Score=30.85 Aligned_cols=82 Identities=10% Similarity=-0.014 Sum_probs=47.0
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+..|- -|.+.+++.++...+
T Consensus 31 ~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFA-KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSAKKVKA 104 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 3456666555444455555666 5787887765443333322 333466777777663 367888888776544
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
+..+...||-+
T Consensus 105 ~~g~iD~li~~ 115 (272)
T 1yb1_A 105 EIGDVSILVNN 115 (272)
T ss_dssp HTCCCSEEEEC
T ss_pred HCCCCcEEEEC
Confidence 43356655544
No 321
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=73.43 E-value=28 Score=31.37 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=55.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|-.|++..-.-..... .++..|.++..+.+|- -|.+.+++.++...++.
T Consensus 30 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELA-RRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLKEF 103 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 45555555444445555666 578888876654433332 3344566777776653 36788888777654433
Q ss_pred CCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 269 ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
.+...++ +|.. .+.+ ...+.++|+++.+
T Consensus 104 g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 104 GALNVLV-NNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp SCCCEEE-ECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 3455544 4442 2222 2356777776554
No 322
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=73.35 E-value=26 Score=31.29 Aligned_cols=102 Identities=8% Similarity=-0.065 Sum_probs=55.7
Q ss_pred CCCEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCChh-----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 190 PNDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYPL-----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 190 ~~~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
...+++|.|+ ...-..+.+.|. ..|..|++..-.-.. .....+..|.++..+.+|-. |.+.+++.++
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~ 93 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCA-EMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD-----SYESCEKLVK 93 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHH-HTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT-----CHHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHH-HCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC-----CHHHHHHHHH
Confidence 3456666655 233333455555 578888775433221 22233345778888877643 7888888887
Q ss_pred HHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 263 AAKAKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++..+...++.+-...+.+ ...+.++++++.+
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 7655544566655442222222 2336666665543
No 323
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=73.21 E-value=34 Score=30.08 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=52.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..- .-..... .++..|.++..+.+|-. |.+.+++.++...++
T Consensus 6 ~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLA-KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVA-----NAEDVTNMVKQTVDV 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 45666555444445555666 57878776543 2222222 23334667777776633 678888877765433
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++-+-...+.+ ...+.++++++.+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22455555332222222 1346666665443
No 324
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=73.00 E-value=32 Score=30.72 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=52.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---c--CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H--GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+. . |.++..+.+|-. |.+.+++.++...
T Consensus 14 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLA-AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS-----DEAQVEAYVTATT 87 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCC-----CHHHHHHHHHHHH
Confidence 345666555444445556666 5787877755433333322222 2 667777776633 6778887777654
Q ss_pred hcCCCeeEEEEecCCC-CC-c--cCCCHHHHHHHH
Q 013892 266 AKGITVRALVVINPGN-PT-G--QVLAEENQRAIV 296 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~N-Pt-G--~~~~~~~l~~i~ 296 (434)
++..+...++ +|..- +. + ...+.++++++.
T Consensus 88 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 121 (267)
T 1iy8_A 88 ERFGRIDGFF-NNAGIEGKQNPTESFTAAEFDKVV 121 (267)
T ss_dssp HHHSCCSEEE-ECCCCCCCCBCGGGSCHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHH
Confidence 3322455544 44321 11 2 134666666543
No 325
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=72.67 E-value=27 Score=31.12 Aligned_cols=100 Identities=13% Similarity=0.020 Sum_probs=51.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+....++..+.+|- -|.+.+++.++...++..+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALD-KAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV-----TKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666555444445555666 5788887765433333333333332444555542 2677777777654433224
Q ss_pred eeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
...++ +|.. .+.+ ...+.+++++..+
T Consensus 87 iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 87 FDLLC-ANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 55554 4332 2222 2346666665543
No 326
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=72.67 E-value=32 Score=31.27 Aligned_cols=100 Identities=11% Similarity=-0.012 Sum_probs=56.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-.......+. .|.++..+.+|- -|.+.+++.++...++
T Consensus 29 k~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALA-ADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVRDLVLK 102 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 345666655544445556666 5788888766554444443333 467788887764 3778888887765444
Q ss_pred CCCeeEEEEecCCC--CCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGN--PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~N--PtG--~~~~~~~l~~i~~ 297 (434)
..+...++ +|..- +.+ ..++.++|+++.+
T Consensus 103 ~g~iD~lV-nnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 103 FGHLDIVV-ANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HSCCCEEE-ECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCCchhhCCHHHHHHHHH
Confidence 33565544 44421 112 2456666665543
No 327
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=72.60 E-value=20 Score=32.22 Aligned_cols=100 Identities=13% Similarity=0.090 Sum_probs=52.8
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|- -|.+.+++.++...++..+.
T Consensus 8 ~vlITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFA-REGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHHcCCC
Confidence 45666555444445555666 5787887765443444444455555666666653 36778887776654332245
Q ss_pred eEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 272 RALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..++-+-...+.+ ...+.++++++.+
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5555432212222 1245566665443
No 328
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=72.52 E-value=29 Score=30.99 Aligned_cols=101 Identities=11% Similarity=0.096 Sum_probs=55.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HcC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+ ..+ .++..+.+|-. |.+.+++.++...+
T Consensus 11 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFA-RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS-----DRAQCDALAGRAVE 84 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 446666655444445556666 578888876654444333332 233 56777776633 67788777766544
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
+..+...++-+-...+.+ ...+.++|+++.+
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 433565555442222222 2346677766544
No 329
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=72.33 E-value=48 Score=28.82 Aligned_cols=99 Identities=10% Similarity=-0.044 Sum_probs=52.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---H-cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-HGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+ . .+.++..+..|- -|.+.+++.++...+
T Consensus 8 ~~vlVtGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLA-SAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIYN 81 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 345666555444445555666 578788776544332222222 1 466777777653 377888888876544
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAI 295 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i 295 (434)
...+...|+-+-...+.+ ...+.++++++
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~ 112 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEV 112 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHH
Confidence 433566655442222222 12455555443
No 330
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=72.07 E-value=34 Score=31.26 Aligned_cols=99 Identities=11% Similarity=0.055 Sum_probs=53.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...++
T Consensus 35 k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYA-KAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMVAQIESE 108 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 446666655444455556666 5787887755432322222 333466666666653 3678888887765444
Q ss_pred CCCeeEEEEecCC-CCCc--cCCCHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTG--QVLAEENQRAIV 296 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~ 296 (434)
..+...|| +|.. .+.+ ...+.++++++.
T Consensus 109 ~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~ 139 (291)
T 3cxt_A 109 VGIIDILV-NNAGIIRRVPMIEMTAAQFRQVI 139 (291)
T ss_dssp TCCCCEEE-ECCCCCCCCCGGGSCHHHHHHHH
T ss_pred cCCCcEEE-ECCCcCCCCCcccCCHHHHHHHH
Confidence 33565554 4432 2222 124666676544
No 331
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=72.06 E-value=30 Score=30.88 Aligned_cols=99 Identities=14% Similarity=-0.014 Sum_probs=50.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+..+..+.+|- -|.+.+++.++...++..+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMV-AEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666555444445556666 5788887755433333333343433455565553 3677888777754433224
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAI 295 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i 295 (434)
...++-+-.....+ ...+.++++++
T Consensus 82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~ 108 (260)
T 1nff_A 82 LHVLVNNAGILNIGTIEDYALTEWQRI 108 (260)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHH
Confidence 55555432222222 12456666443
No 332
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=71.78 E-value=32 Score=31.41 Aligned_cols=102 Identities=14% Similarity=0.034 Sum_probs=57.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh-----hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP-----LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-. .....++..|.++..+.+|-. |.+.+++.++...
T Consensus 50 k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYA-REGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS-----DESFARSLVHKAR 123 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTT-----SHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 346666655544455556666 57888877554311 123334556778887776633 6777877777654
Q ss_pred hcCCCeeEEEEecCC-CCCc--cCCCHHHHHHHHHH
Q 013892 266 AKGITVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~~ 298 (434)
++..+...++.+... .+.+ ..++.++|+++.+.
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 443356555444221 1222 24577788776653
No 333
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=71.76 E-value=40 Score=29.68 Aligned_cols=81 Identities=14% Similarity=0.155 Sum_probs=45.9
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-..... .++..+.++..+..|- -|.+.+++.++...++
T Consensus 14 k~vlItGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALA-EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 456666555444445556666 578788776544332222 2333466777777663 3678888877764433
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..++..|+.+
T Consensus 88 ~~~id~vi~~ 97 (260)
T 3awd_A 88 EGRVDILVAC 97 (260)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 2245655544
No 334
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=71.73 E-value=28 Score=30.93 Aligned_cols=97 Identities=19% Similarity=0.127 Sum_probs=50.4
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh--HHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL--YSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~--~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
+++|.|+...-..+.+.|. ..|..|++..-.-.. .... ++..|.++..+.+|-. |.+.+++.++...++
T Consensus 5 vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 5 AMVTGGAQGIGRGISEKLA-ADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT-----DKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEETTTSHHHHHHHHHHH-HHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 5555555443444555565 467777765433222 2222 2233667777776633 677777777654433
Q ss_pred CCCeeEEEEecCC-CCCcc--CCCHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTGQ--VLAEENQRAIV 296 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~ 296 (434)
..+...++ +|.. .+.+. ..+.++++++.
T Consensus 79 ~g~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~ 109 (258)
T 3a28_C 79 LGGFDVLV-NNAGIAQIKPLLEVTEEDLKQIY 109 (258)
T ss_dssp HTCCCEEE-ECCCCCCCCCGGGCCHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCChhhCCHHHHHHHH
Confidence 22455544 4432 22221 24666666544
No 335
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=71.71 E-value=50 Score=29.59 Aligned_cols=101 Identities=12% Similarity=0.002 Sum_probs=54.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELA-GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-----LSRTERDKLMQTVAHV 95 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCcchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 346666655444455556666 5787887765433333222 233466777777663 3678888877765443
Q ss_pred C-CCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 G-ITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g-~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
. .+...++-+-...+.+ ...+.++++++.+
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2 2555555432222222 2346677766443
No 336
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=71.63 E-value=25 Score=30.85 Aligned_cols=79 Identities=11% Similarity=0.079 Sum_probs=43.4
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc----CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH----GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
+++|.|+...-..+...|. ..|..|++..-.-.......+.. +.++..+..|- -|.+.+++.++...++.
T Consensus 5 vlItGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFL-ARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQF 78 (250)
T ss_dssp EEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 5566555443445555565 57777777654433333333322 55666676653 36788888777544332
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.+...|+.+
T Consensus 79 ~~id~li~~ 87 (250)
T 2cfc_A 79 GAIDVLVNN 87 (250)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 245555544
No 337
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=71.32 E-value=32 Score=31.11 Aligned_cols=101 Identities=15% Similarity=0.081 Sum_probs=54.8
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-.. ....+...|.++..+..|-. |.+.+++.++...+
T Consensus 33 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLA-GAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS-----EAGAGTDLIERAEA 106 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT-----STTHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 3456666655544455566666 578788765533322 33334445778888777643 45556666555444
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.| +...++.+-...+.+ ...+.++|+++.+
T Consensus 107 ~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 107 IA-PVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp HS-CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hC-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 33 566555442222222 2356677766554
No 338
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=70.73 E-value=29 Score=30.98 Aligned_cols=101 Identities=15% Similarity=0.189 Sum_probs=64.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEE-E--cCC-----------CChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGIL-C--PIP-----------QYPLYSASIALHGGTLVPYYLDEATGWGLETSEV 257 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vl-v--~~p-----------~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 257 (434)
-+++-+|+.+....+..+. ..|-.|. + ..| ........++..|+....+++..++ .-..++|
T Consensus 7 vvvl~SGGkDSs~al~~l~--~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI--KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH--HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHH--HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHH
Confidence 3677789988887777665 3565543 2 111 1223455677889988888775331 2246777
Q ss_pred HHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 258 KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 258 ~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
.++++.. ...+++ +|.+++..+...+-+.|.+.|+.++.
T Consensus 83 ~~~l~~~-----~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 83 KRVLSGL-----KIQGIV-------AGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHHHTTS-----CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHhc-----CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 7777653 456777 89999988999999999999987653
No 339
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=70.61 E-value=25 Score=31.69 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=55.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++. ...-.. ....++..|.++..+.+|-. |.+.+++.++...++
T Consensus 29 ~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLA-SDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS-----DPAAVRRLFATAEEA 102 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHH-HHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 45666555444445555666 578777764 322222 22334556778888877643 678888877765444
Q ss_pred CCCeeEEEEecC-CCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINP-GNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p-~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++ +|. ..+.+ ...+.++|+++.+
T Consensus 103 ~g~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 103 FGGVDVLV-NNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HSCEEEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 33565554 444 22222 2356677776443
No 340
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=70.49 E-value=75 Score=30.95 Aligned_cols=81 Identities=14% Similarity=-0.002 Sum_probs=46.0
Q ss_pred CEEEcCChHHHHHH-HHHHHhcC-CCCEEEEcCCC------------Ch---hHHHHHHHcCCeEEEEecCCCCCCCCCH
Q 013892 192 DIFLTDGASPAVHM-MMQLLIRS-ENDGILCPIPQ------------YP---LYSASIALHGGTLVPYYLDEATGWGLET 254 (434)
Q Consensus 192 ~i~~t~G~~~al~~-~l~~l~~~-~gd~Vlv~~p~------------y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 254 (434)
.+++.+|++.+|-. +...|. . .|-.|++..-. |. .....++..|.+...+..|- .|.
T Consensus 62 KvaLVTGASsGIG~AiA~~LA-~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv-----td~ 135 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAA-FGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA-----FSD 135 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHH-HHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----TSH
T ss_pred CEEEEECCChHHHHHHHHHHH-HhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC-----CCH
Confidence 44444444455544 344454 4 67666653211 10 12244566788888888773 478
Q ss_pred HHHHHHHHHHHhcC-CCeeEEEEecC
Q 013892 255 SEVKKQLEAAKAKG-ITVRALVVINP 279 (434)
Q Consensus 255 ~~l~~~l~~~~~~g-~~~~~i~l~~p 279 (434)
+.+++.++...++. .+...+| +|.
T Consensus 136 ~~v~~~v~~i~~~~~G~IDiLV-NNA 160 (422)
T 3s8m_A 136 AARAQVIELIKTEMGGQVDLVV-YSL 160 (422)
T ss_dssp HHHHHHHHHHHHHSCSCEEEEE-ECC
T ss_pred HHHHHHHHHHHHHcCCCCCEEE-EcC
Confidence 88888888766553 4666544 444
No 341
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=70.31 E-value=40 Score=30.54 Aligned_cols=99 Identities=16% Similarity=0.086 Sum_probs=55.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.|+...-..+.+.|. ..|-.|++..-.-.......+. .|.++..+.+|- -|.+.+++.++...++.
T Consensus 10 ~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFA-REGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVRRF 83 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 45555555444445556666 5788888877654444444333 366777777663 36777877777654432
Q ss_pred CCeeEEEEecCC--CCCcc--CCCHHHHHHHHH
Q 013892 269 ITVRALVVINPG--NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~--NPtG~--~~~~~~l~~i~~ 297 (434)
.+...+| +|.. .+.+. ..+.++++++.+
T Consensus 84 g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 84 GGLDTAF-NNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp SCCCEEE-ECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCCCChhhCCHHHHHHHHH
Confidence 2455444 4442 12222 356677766554
No 342
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=70.29 E-value=43 Score=29.25 Aligned_cols=99 Identities=11% Similarity=0.037 Sum_probs=50.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+... .++..+..|- -|.+.+++.++...++..
T Consensus 8 ~vlVtGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 8 VAIITGGTLGIGLAIATKFV-EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHhC
Confidence 45566554444445556666 578777776543333333333332 3455566553 267777777766443322
Q ss_pred CeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 270 TVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
+...|+.+-...+.+ ...+.++++++.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 110 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLL 110 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 465555442222222 234556665443
No 343
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=70.20 E-value=37 Score=31.57 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=53.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC-----Ch---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-----YP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~-----y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
.+++|.|+...-..+.+.|. ..|.+|++..-. -. .....+...|.++..+.+|- -|.+.+++.++.
T Consensus 7 ~vlVTGas~GIG~aia~~L~-~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dv-----td~~~v~~~~~~ 80 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALA-GAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV-----QSQVSVDRAIDQ 80 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHHHH
Confidence 35566555444445556666 588888863211 11 12223344577788887763 377888888876
Q ss_pred HHhcCCCeeEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
..++..+...++ +|.. .+.|. .++.++++++.+
T Consensus 81 ~~~~~g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 81 IIGEDGRIDVLI-HNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHSCCSEEE-ECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCCcCCCCChhhCCHHHHHHHHH
Confidence 544433555544 4442 22222 346666655443
No 344
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=69.88 E-value=40 Score=29.56 Aligned_cols=98 Identities=10% Similarity=-0.003 Sum_probs=51.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeE-EEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTL-VPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++ ..+..|- -|.+.+++.++...+. .
T Consensus 12 k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~-~ 84 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFA-ASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAAAEAEAV-A 84 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHHHHHHhh-C
Confidence 456666555444455556666 578788776544333444444445555 5565553 3678888777664432 2
Q ss_pred CeeEEEEecCCCCCc--cCCCHHHHHHH
Q 013892 270 TVRALVVINPGNPTG--QVLAEENQRAI 295 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG--~~~~~~~l~~i 295 (434)
+...|+-+-...+.+ ...+.+++++.
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~ 112 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQV 112 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHH
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHH
Confidence 455555442222222 23455555543
No 345
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=69.62 E-value=43 Score=29.80 Aligned_cols=100 Identities=12% Similarity=0.045 Sum_probs=53.2
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLA-EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT-----SEEAVIGTVDSVVRD 81 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 346666555444455556666 5787777655432222222 2234667777776633 677777777665433
Q ss_pred CCCeeEEEEecCC-C-CCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG-N-PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~-N-PtG--~~~~~~~l~~i~~ 297 (434)
..+...++ +|.. . +.+ ...+.++|+++.+
T Consensus 82 ~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 82 FGKIDFLF-NNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HSCCCEEE-ECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCCccccCCHHHHHHHHH
Confidence 22455554 4432 1 222 1346677766544
No 346
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=69.62 E-value=60 Score=28.72 Aligned_cols=98 Identities=18% Similarity=0.090 Sum_probs=51.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-----CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH-----GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+.. +.++..+.+|- -|.+.+++.++...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELA-RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKAR 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHHH
Confidence 346666555444445555666 57878877654333333322221 33666666653 37788888887765
Q ss_pred hcCCCeeEEEEecCCCCCc--cCCCHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTG--QVLAEENQRAI 295 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i 295 (434)
++.. ...++-+-...+.+ ...+.+++++.
T Consensus 82 ~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~ 112 (260)
T 2z1n_A 82 DLGG-ADILVYSTGGPRPGRFMELGVEDWDES 112 (260)
T ss_dssp HTTC-CSEEEECCCCCCCBCGGGCCHHHHHHH
T ss_pred HhcC-CCEEEECCCCCCCCCcccCCHHHHHHH
Confidence 5433 55555432222222 13456666443
No 347
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=69.55 E-value=51 Score=29.01 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=51.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYS----ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.... ...+..+.++..+.+|- -|.+.+++.++...++
T Consensus 16 ~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVA-AAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQQIDAD 89 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 46666555444445556666 56777766543222211 12223466777777663 3678888887765544
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
..+...++-+-.....+ ...+.+++++..
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 120 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVY 120 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHH
Confidence 33565554432222222 124556665443
No 348
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=69.31 E-value=48 Score=29.29 Aligned_cols=99 Identities=18% Similarity=0.041 Sum_probs=51.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.- ......+...|.++..+.+|- -|.+.+++.++...++..+
T Consensus 6 ~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLA-RAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAEREFGG 79 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHSS
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666555444445555666 5787877754322 222223333466777776653 3677888777754433224
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
...++-+-...+.+ ...+.++++++.
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~ 107 (255)
T 2q2v_A 80 VDILVNNAGIQHVAPVEQFPLESWDKII 107 (255)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 55555442222222 234666665543
No 349
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.93 E-value=42 Score=30.20 Aligned_cols=100 Identities=7% Similarity=-0.033 Sum_probs=52.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HcCC---eEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---LHGG---TLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+ ..|. ++..+.+|- -|.+.+++.++...
T Consensus 8 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFA-QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-----TTEDGQDQIINSTL 81 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC-----CCHHHHHHHHHHHH
Confidence 45666555444445556666 578888776543333333222 2344 666776663 36777877776644
Q ss_pred hcCCCeeEEEEecCCCCCc------cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTG------QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG------~~~~~~~l~~i~~ 297 (434)
++..+...+|-+-.....+ ...+.++++++.+
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 3322455554432211111 2345666665543
No 350
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=67.87 E-value=39 Score=30.89 Aligned_cols=100 Identities=13% Similarity=0.022 Sum_probs=52.0
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG---TLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... +...|. ++..+.+|- -|.+.+++.++..
T Consensus 27 k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFA-KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-----TEASGQDDIINTT 100 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCC-----CCHHHHHHHHHHH
Confidence 345666555444445556666 5788887765443333222 223354 667776663 3677787777654
Q ss_pred HhcCCCeeEEEEecCCCCCc----cCCCHHHHHHHH
Q 013892 265 KAKGITVRALVVINPGNPTG----QVLAEENQRAIV 296 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG----~~~~~~~l~~i~ 296 (434)
.++..+...+|-+-.....+ ...+.++++++.
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 136 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTF 136 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHH
Confidence 43322455554432222222 134566665543
No 351
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=66.88 E-value=58 Score=29.29 Aligned_cols=100 Identities=10% Similarity=0.030 Sum_probs=52.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc---CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+.. | ++..+.+|- -|.+.+++.++...+.
T Consensus 30 k~vlVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLL-EAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGEL 102 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 345666555444445555566 57888887665433333333332 3 566665553 3678888877765444
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...+|-+-.....+ ...+.++++++.+
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 33566555432212122 1245566655443
No 352
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=66.76 E-value=62 Score=28.85 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=53.2
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhH---HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLY---SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
+++|.|+...-..+.+.|. ..|-.|++. ...-... ...+...+.++..+.+|-. |.+.+++.++...++.
T Consensus 29 vlITGas~gIG~a~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 29 VLVTGGSRGIGAAVCRLAA-RQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVG-----NAADIAAMFSAVDRQF 102 (272)
T ss_dssp EEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHhC
Confidence 4555444443344555566 578887654 3332322 2334455778888887643 6788888777654442
Q ss_pred CCeeEEEEecCCCCC-c--cCCCHHHHHHHHH
Q 013892 269 ITVRALVVINPGNPT-G--QVLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~NPt-G--~~~~~~~l~~i~~ 297 (434)
.+...||.+-..... + ..++.+++++..+
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 345555544221111 1 1246677766654
No 353
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=66.60 E-value=51 Score=28.64 Aligned_cols=98 Identities=10% Similarity=0.005 Sum_probs=50.6
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCC-------EEEEcCCCChhHHHHHH---HcCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 193 IFLTDGASPAVHMMMQLLIRSEND-------GILCPIPQYPLYSASIA---LHGGTLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd-------~Vlv~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
+++|.|+...-..+.+.|. ..|. .|++..-.-........ ..+.++..+..|- -|.+.+++.++
T Consensus 5 vlITGasggiG~~la~~l~-~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (244)
T 2bd0_A 5 LLITGAGKGIGRAIALEFA-RAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-----SDMADVRRLTT 78 (244)
T ss_dssp EEEETTTSHHHHHHHHHHH-HHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHH-HhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecC-----CCHHHHHHHHH
Confidence 5566554443344555555 4565 67665543333332222 2366777777663 36788888777
Q ss_pred HHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 263 AAKAKGITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
...++..+...|+.+-...+.+ ...+.+++++..
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 114 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTM 114 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHH
Confidence 6544433566655442222222 124556555443
No 354
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=66.59 E-value=34 Score=30.32 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=54.7
Q ss_pred EEEcCChHHHHH-HHHHHHhc-CCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 193 IFLTDGASPAVH-MMMQLLIR-SENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 193 i~~t~G~~~al~-~~l~~l~~-~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
+++.+|++.+|- .+.+.|.. ..|-.|++..-.-.......+..|.++..+.+|-. |.+.+++.++...++..+
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDIT-----EDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTT-----SHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCC-----CHHHHHHHHHHHHHhcCC
Confidence 344444445544 44445542 22467776555544555555666777877777633 678888877765444335
Q ss_pred eeEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 271 VRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
...++-+-.. .+.+. ..+.++|+++.+
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYD 108 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 6655544221 22222 356677766544
No 355
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=66.54 E-value=64 Score=27.94 Aligned_cols=98 Identities=11% Similarity=0.055 Sum_probs=51.6
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEE-cCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILC-PIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv-~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
+++|.|+...-..+.+.|. ..|..|++ ..-.-..... .++..+.++..+..|-. |.+.+++.++...++.
T Consensus 4 vlVTGasggiG~~la~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLG-KAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS-----KEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTT-----SHHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCC-----CHHHHHHHHHHHHHHc
Confidence 5556554444445555666 57878776 3433222222 23344777777776633 6788888877654443
Q ss_pred CCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
.+...++-+-.....+ ...+.+++++..
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 107 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVI 107 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHH
Confidence 3566555442222212 124556655443
No 356
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=66.53 E-value=51 Score=29.38 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=52.0
Q ss_pred CEEEcCChHHHH-HHHHHHHhcCCCCEEEEcC-CCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPI-PQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al-~~~l~~l~~~~gd~Vlv~~-p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++.+|++.+| ..+.+.|. ..|-.|++.. ..-..... .....|.++..+.+|-. |.+.+++.++...+
T Consensus 26 k~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLH-DAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA-----DFESCERCAEKVLA 99 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-TTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHH
Confidence 444444444555 44556666 6787877654 22222222 22334667777776633 67888877776544
Q ss_pred cCCCeeEEEEecCCCCCcc--CCCHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTGQ--VLAEENQRAIV 296 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~ 296 (434)
+..+...+|.+-.....+. ..+.++++++.
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~ 131 (269)
T 3gk3_A 100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVM 131 (269)
T ss_dssp HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCcchhhCCHHHHHHHH
Confidence 4335665554422222222 34666666543
No 357
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=66.34 E-value=69 Score=28.23 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=55.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcC---CCCEEEEcCCCChhHHHHHHHc-----CCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRS---ENDGILCPIPQYPLYSASIALH-----GGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~---~gd~Vlv~~p~y~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
.+++|.|+...-..+.+.|. . .|..|++..-.-.......+.. |.++..+.+|-. |.+.+++.++.
T Consensus 8 ~~lVTGas~gIG~~ia~~l~-~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~ 81 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLA-RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG-----TEAGVQRLLSA 81 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHH-TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT-----SHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHH-HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC-----CHHHHHHHHHH
Confidence 45666555444445555665 5 6888887654433333333222 677877777643 67888888877
Q ss_pred HHh--cCCCee-EEEEecCCC--CC-ccC---CCHHHHHHHHHH
Q 013892 264 AKA--KGITVR-ALVVINPGN--PT-GQV---LAEENQRAIVDF 298 (434)
Q Consensus 264 ~~~--~g~~~~-~i~l~~p~N--Pt-G~~---~~~~~l~~i~~~ 298 (434)
..+ ...+.. -++++|..- +. +.. .+.++++++.+.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 654 211222 255566532 11 111 566777776653
No 358
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=66.11 E-value=59 Score=28.38 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=53.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC-ChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ-YPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~-y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|.+|++..-. -.... ..++..|.++..+..|-. |.+.+++.++...++
T Consensus 9 ~vlVTGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFA-RAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLA-----TSEACQQLVDEFVAK 82 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 46666555444455556666 578777765433 22222 223344777777776633 678888877754433
Q ss_pred CCCeeEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
..++..|+-+-.. .+.+. ..+.++++++.+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 2245555544222 22222 245566665443
No 359
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=65.40 E-value=62 Score=28.74 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=53.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEE-cCCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILC-PIPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv-~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++ ....-.... ..+...+.++..+.+|- -|.+.+++.++...++
T Consensus 28 ~vlVTGas~gIG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLA-ADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDV-----ANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 45666555444455566666 57878755 333222222 23344567777777763 3678888877765444
Q ss_pred CCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++.+-.....+ ...+.+++++..+
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 33555554332222222 1346677766554
No 360
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=65.37 E-value=17 Score=33.16 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=44.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|-. |.+.+++.++.
T Consensus 17 k~vlVTGas~gIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~ 83 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELA-RRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ-----DLSSVRRFADG 83 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTT-----CHHHHHHHHHT
T ss_pred CEEEEeCCCChHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCC-----CHHHHHHHHHh
Confidence 456666665544455566666 57888887765555555555566778888877633 78888887765
No 361
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=65.20 E-value=40 Score=30.52 Aligned_cols=80 Identities=10% Similarity=-0.035 Sum_probs=43.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHH---HH-HcCCeEEEEecCCCCCCCCC----HHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSAS---IA-LHGGTLVPYYLDEATGWGLE----TSEVKKQLE 262 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~---~~-~~g~~~~~~~~~~~~~~~~d----~~~l~~~l~ 262 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.- ...... +. ..|.++..+.+|-. | .+.+++.++
T Consensus 25 ~~lVTGas~gIG~aia~~L~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLT-----NSNVLPASCEEIIN 98 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----CSTTHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecC-----CccCCHHHHHHHHH
Confidence 45565555444445555565 5677777655443 322222 22 34667777776633 5 677777776
Q ss_pred HHHhcCCCeeEEEEe
Q 013892 263 AAKAKGITVRALVVI 277 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~ 277 (434)
...+...+...+|-+
T Consensus 99 ~~~~~~g~iD~lvnn 113 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNN 113 (288)
T ss_dssp HHHHHHSCCCEEEEC
T ss_pred HHHHhcCCCCEEEEC
Confidence 544332245555433
No 362
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=64.88 E-value=50 Score=29.66 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=54.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCC---eEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG---TLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|. ++..+..|- -|.+.+++.++..
T Consensus 12 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 85 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLV-AAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVDAV 85 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHHHH
Confidence 346666655444455566666 5788888766443333333 333344 677777663 3678888877765
Q ss_pred HhcCCCeeEEEEecCC--CCCc--cCCCHHHHHHHH
Q 013892 265 KAKGITVRALVVINPG--NPTG--QVLAEENQRAIV 296 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~--NPtG--~~~~~~~l~~i~ 296 (434)
.++..+...++ +|.. .+.+ ...+.++|+++.
T Consensus 86 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 120 (281)
T 3svt_A 86 TAWHGRLHGVV-HCAGGSENIGPITQVDSEAWRRTV 120 (281)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCCGGGCCHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHH
Confidence 44333455554 4432 2222 235666666644
No 363
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.69 E-value=32 Score=30.87 Aligned_cols=80 Identities=10% Similarity=-0.052 Sum_probs=42.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc------CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH------GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+.. +.++..+.+|- -|.+.+++.++...
T Consensus 8 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFA-REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEILSTTL 81 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHHHHHH
Confidence 35555544433344555666 57878877654333333333222 34566666653 26777777776543
Q ss_pred hcCCCeeEEEEe
Q 013892 266 AKGITVRALVVI 277 (434)
Q Consensus 266 ~~g~~~~~i~l~ 277 (434)
++..+...++-+
T Consensus 82 ~~~g~id~lv~~ 93 (278)
T 1spx_A 82 GKFGKLDILVNN 93 (278)
T ss_dssp HHHSCCCEEEEC
T ss_pred HHcCCCCEEEEC
Confidence 332245554433
No 364
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=63.86 E-value=20 Score=31.18 Aligned_cols=96 Identities=17% Similarity=0.080 Sum_probs=55.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-..........+.++..+.+|-. |.+.+++.++...+ ..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~---~~ 73 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYD-AEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLA-----SHQEVEQLFEQLDS---IP 73 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTT-----CHHHHHHHHHSCSS---CC
T ss_pred EEEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCC-----CHHHHHHHHHHHhh---cC
Confidence 36677666554455566666 57877877766555555566666666666666533 67888887765321 12
Q ss_pred eEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 272 RALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
. ++++|.. .+.+. ..+.++++++.+
T Consensus 74 d-~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 74 S-TVVHSAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp S-EEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred C-EEEEeCCcCCCCccccCCHHHHHHHHH
Confidence 3 4445442 22222 356677766554
No 365
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=63.58 E-value=77 Score=27.88 Aligned_cols=101 Identities=7% Similarity=-0.019 Sum_probs=53.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+. .+.++..+.+|-. .-|.+.+++.++...+.
T Consensus 14 ~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYA-RYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL---TCTSENCQQLAQRIAVN 89 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT---TCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc---cCCHHHHHHHHHHHHHh
Confidence 45566555444445555666 5788888766544433333222 2334555555431 23677787777765554
Q ss_pred CCCeeEEEEecCC--CCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG--NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~--NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++- |.. .+.+ ...+.++|+++.+
T Consensus 90 ~g~id~lv~-nAg~~~~~~~~~~~~~~~~~~~~~ 122 (252)
T 3f1l_A 90 YPRLDGVLH-NAGLLGDVCPMSEQNPQVWQDVMQ 122 (252)
T ss_dssp CSCCSEEEE-CCCCCCCCSCTTTCCHHHHHHHHH
T ss_pred CCCCCEEEE-CCccCCCCCCcccCCHHHHHHHHh
Confidence 445665554 432 2222 2356677766554
No 366
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=63.55 E-value=32 Score=30.48 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=53.0
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~ 272 (434)
+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+.++..+.+|- -|.+.+++.++...++..+..
T Consensus 3 vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFI-QQGHKVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEETTTTSTTHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEECCCChHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCC
Confidence 4555544333344555565 5788887765443344444455555667776663 367888888776433322455
Q ss_pred EEEEecCCC--CCc--cCCCHHHHHHHHH
Q 013892 273 ALVVINPGN--PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 273 ~i~l~~p~N--PtG--~~~~~~~l~~i~~ 297 (434)
.++ +|..- +.+ ...+.++++++.+
T Consensus 77 ~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 77 ILV-NNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp EEE-ECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EEE-ECCCcCCCCCchhhCCHHHHHHHHH
Confidence 444 44421 112 2356666665443
No 367
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=63.46 E-value=72 Score=28.12 Aligned_cols=99 Identities=10% Similarity=-0.027 Sum_probs=50.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+..|-. |.+.+++.++...+.
T Consensus 15 k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFA-GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDAS-----LRPEREKLMQTVSSM 88 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 346666555444455556666 5787777665433322222 2334666777766532 677777777654332
Q ss_pred C-CCeeEEEEecCCCCCc--cCCCHHHHHHH
Q 013892 268 G-ITVRALVVINPGNPTG--QVLAEENQRAI 295 (434)
Q Consensus 268 g-~~~~~i~l~~p~NPtG--~~~~~~~l~~i 295 (434)
- .+...|+-+-...+.+ ...+.+++++.
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~ 119 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFH 119 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHH
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHH
Confidence 1 2566666553222222 22455665543
No 368
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=63.40 E-value=66 Score=28.03 Aligned_cols=102 Identities=9% Similarity=0.014 Sum_probs=52.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHcC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASI---ALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~---~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-....... +..+ ..+..+.++-+ .-|.+.+++.++...+.
T Consensus 16 ~vlITGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d---~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYA-AHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE---NATAQQYRELAARVEHE 91 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT---TCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc---cCCHHHHHHHHHHHHHh
Confidence 45565555444445556666 57888887765544333332 2333 33444444332 23677777777665443
Q ss_pred CCCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
..+...++.+-.. .+.+ ..++.+++++..+
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMH 124 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 3355555544221 2222 2346677766554
No 369
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=63.35 E-value=55 Score=28.96 Aligned_cols=102 Identities=18% Similarity=0.104 Sum_probs=53.3
Q ss_pred CCCCEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 189 DPNDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 189 ~~~~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
....+++|.|+ ...-..+.+.|. ..|..|++..-.-. .........+ .+..+.+|- -|.+.+++.++.
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv-----~~~~~v~~~~~~ 85 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACK-REGAELAFTYVGDRFKDRITEFAAEFG-SELVFPCDV-----ADDAQIDALFAS 85 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-HcCCCEEEEecchhhHHHHHHHHHHcC-CcEEEECCC-----CCHHHHHHHHHH
Confidence 34456676654 333344555565 57877776643321 1222223333 355566553 367888888877
Q ss_pred HHhcCCCeeEEEEecCCCCC----cc---CCCHHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPGNPT----GQ---VLAEENQRAIVD 297 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~NPt----G~---~~~~~~l~~i~~ 297 (434)
..++..++..+|.+-...+. +. ..+.+++++..+
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHh
Confidence 65554456655544222211 21 256677776654
No 370
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=63.17 E-value=73 Score=27.56 Aligned_cols=79 Identities=13% Similarity=0.003 Sum_probs=41.9
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHHHH---HHHcCCeEEE-EecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSAS---IALHGGTLVP-YYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~~~---~~~~g~~~~~-~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
+++|.|+...-..+.+.|. ..|..|++. .-.-...... ++..|.++.. +..|- -|.+.+++.++...+.
T Consensus 4 vlITGasggiG~~~a~~l~-~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 4 ALITGASRGIGRAIALRLA-EDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL-----LEAEAATALVHQAAEV 77 (245)
T ss_dssp EEETTTTSHHHHHHHHHHH-TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccC-----CCHHHHHHHHHHHHHh
Confidence 5666555444445556666 578787775 4332222222 2334555555 55553 3677777777654433
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...|+-+
T Consensus 78 ~~~~d~li~~ 87 (245)
T 2ph3_A 78 LGGLDTLVNN 87 (245)
T ss_dssp HTCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 2245555544
No 371
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=63.03 E-value=47 Score=30.72 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=53.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+.+.|. ..|-.|++..-.-...... +...|. .+..+.+|- -|.+.+++.++...+
T Consensus 10 ~vlVTGas~gIG~~la~~l~-~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLL-NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-----ASREGFKMAADEVEA 83 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEcCCchHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 45666555444444555666 5788887766554433333 233344 677777663 367888888877655
Q ss_pred cCCCeeEEEEecCCCCCcc--CCCHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTGQ--VLAEENQRAIV 296 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~ 296 (434)
...+...++.+-...+.+. ..+.++++++.
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 115 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLL 115 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 5445665554422222221 23556665543
No 372
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=62.41 E-value=87 Score=28.02 Aligned_cols=99 Identities=17% Similarity=0.089 Sum_probs=52.6
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
...+++|.|+...-..+.+.|. ..|..|++..-. ..... .+...|.++..+.+|-. |.+.+++..+...+
T Consensus 31 gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 103 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYA-RAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLA-----DLEGAANVAEELAA 103 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHh
Confidence 3456666655544455566666 578787776532 22222 23345778888877643 66666665443322
Q ss_pred cCCCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
.| +...++ +|.. .+.+ ...+.++|+++.+
T Consensus 104 ~g-~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 104 TR-RVDVLV-NNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp HS-CCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cC-CCcEEE-ECCCCCCCCCchhCCHHHHHHHHH
Confidence 23 455554 4432 1111 1346677766554
No 373
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=62.32 E-value=70 Score=28.07 Aligned_cols=80 Identities=13% Similarity=0.074 Sum_probs=43.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..- .-..... .++..+.++..+.+|-. |.+.+++.++...++
T Consensus 9 ~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFA-TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT-----VESDVINLVQSAIKE 82 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 46666555444445555666 56777776543 2222222 23334677777776633 677777777654333
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...|+.+
T Consensus 83 ~g~id~li~~ 92 (261)
T 1gee_A 83 FGKLDVMINN 92 (261)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 2245555544
No 374
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=61.96 E-value=75 Score=28.13 Aligned_cols=81 Identities=11% Similarity=0.022 Sum_probs=43.4
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCC--eEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGG--TLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+. ++..+..|- -|.+.+++.++...++.
T Consensus 17 k~vlITGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFV-RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV-----TKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 346666655444455556666 5787877765433323333333322 456666553 26777877776543332
Q ss_pred CCeeEEEEe
Q 013892 269 ITVRALVVI 277 (434)
Q Consensus 269 ~~~~~i~l~ 277 (434)
.+...|+-+
T Consensus 91 ~~id~li~~ 99 (278)
T 2bgk_A 91 GKLDIMFGN 99 (278)
T ss_dssp SCCCEEEEC
T ss_pred CCCCEEEEC
Confidence 245555533
No 375
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=61.56 E-value=76 Score=27.95 Aligned_cols=100 Identities=13% Similarity=0.056 Sum_probs=51.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLA-QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG-----KAEDRERLVAMAVNL 88 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 345666555444445555666 5787877755433322222 3334667777766532 677777777654333
Q ss_pred CCCeeEEEEecCCCC-Cc--cCCCHHHHHHHH
Q 013892 268 GITVRALVVINPGNP-TG--QVLAEENQRAIV 296 (434)
Q Consensus 268 g~~~~~i~l~~p~NP-tG--~~~~~~~l~~i~ 296 (434)
..+...++-+-...+ .+ ...+.++|+++.
T Consensus 89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 2zat_A 89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHH
Confidence 224555543322221 12 234666665544
No 376
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=61.33 E-value=72 Score=28.82 Aligned_cols=100 Identities=11% Similarity=0.133 Sum_probs=51.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---H-----cCCeEEEEecCCCCCCCCCHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIA---L-----HGGTLVPYYLDEATGWGLETSEVKKQLE 262 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~---~-----~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 262 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+ . .+.++..+..|-. |.+.+++.++
T Consensus 19 k~vlVTGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~ 92 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELL-ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR-----NEEEVNNLVK 92 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT-----CHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC-----CHHHHHHHHH
Confidence 346666555444445556666 577787776543333322222 1 3567777776633 6778877776
Q ss_pred HHHhcCCCeeEEEEecCCCCCc--cCCCHHHHHHHH
Q 013892 263 AAKAKGITVRALVVINPGNPTG--QVLAEENQRAIV 296 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~ 296 (434)
...+...+...||-+-...+.+ ...+.+++++..
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 128 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVL 128 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHH
Confidence 6433322455555432222212 224556665444
No 377
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=61.29 E-value=77 Score=27.94 Aligned_cols=101 Identities=11% Similarity=-0.050 Sum_probs=51.5
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++..- .-.... ..++..|.++..+..|- -|.+.+++.++...+
T Consensus 22 k~vlItGasggiG~~la~~l~-~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELG-RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADI-----SKPSEVVALFDKAVS 95 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 346666555443445556666 57777776543 222222 22333477777777663 367777777765433
Q ss_pred cCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
.-.+...|+-+-...+.+ ...+.+++++..+
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 322455544332222222 1345666665554
No 378
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=61.26 E-value=91 Score=27.90 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=52.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPL----YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.. ....++..|.++..+.+|-. |.+.+++.++...+.
T Consensus 31 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG-----VVEDIVRMFEEAVKI 104 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 45555554443345555666 578787765433221 12234445777777776633 677777777654333
Q ss_pred CCCeeEEEEecCC-CCCcc--CCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG-NPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~-NPtG~--~~~~~~l~~i~~ 297 (434)
..+...++ +|.. ...+. ..+.++++++.+
T Consensus 105 ~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 105 FGKLDIVC-SNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp HSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHH
Confidence 22455444 4432 22221 246677766554
No 379
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=61.18 E-value=44 Score=33.61 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=57.1
Q ss_pred CCCCEEEcCChHHHHHHH-HHHHhcCCCCE-EEEc-C----------------CCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 189 DPNDIFLTDGASPAVHMM-MQLLIRSENDG-ILCP-I----------------PQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 189 ~~~~i~~t~G~~~al~~~-l~~l~~~~gd~-Vlv~-~----------------p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
.++.+++.+|++.+|... .+.|. ..|.. |++. . +.-......++..|.++..+.+|-.
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La-~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-- 325 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLA-RDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-- 325 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHH-HHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT--
T ss_pred cCCCEEEEECCCCcHHHHHHHHHH-HcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC--
Confidence 345666666666666544 44454 45544 5543 2 2222344455667999999888743
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
|.+.+++.++... +..+...||-+-.-...+. .++.++++++.+
T Consensus 326 ---d~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 326 ---DAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ---SHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 7889998888754 3335655554422222222 356677766554
No 380
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=61.16 E-value=65 Score=29.03 Aligned_cols=100 Identities=18% Similarity=0.133 Sum_probs=51.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---c-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H-GGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|-.|++..-.-.......+. . +..+..+.+|- -|.+.+++.++...++
T Consensus 35 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALS-AEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-----GDPDQVAALFAAVRAE 108 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 45555544433344555566 5788888766544433333322 2 33345666653 3677888777765444
Q ss_pred CCCeeEEEEecCCC-CCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPGN-PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~N-PtG--~~~~~~~l~~i~~ 297 (434)
..+...+|-+-... +.+ ..++.++++++.+
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 141 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVA 141 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 33555554432221 211 2356677666544
No 381
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=61.07 E-value=57 Score=28.18 Aligned_cols=79 Identities=15% Similarity=0.014 Sum_probs=40.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-..........+ ++..+..|- -|.+.+++.++...+...+.
T Consensus 7 ~vlVtGasggiG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLH-AKGYRVGLMARDEKRLQALAAELE-GALPLPGDV-----REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHST-TCEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhh-hceEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 35666555444445555666 578787766543333333333332 334444442 36777777776543332245
Q ss_pred eEEEEe
Q 013892 272 RALVVI 277 (434)
Q Consensus 272 ~~i~l~ 277 (434)
..++-+
T Consensus 80 d~li~~ 85 (234)
T 2ehd_A 80 SALVNN 85 (234)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 555544
No 382
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=60.93 E-value=62 Score=28.60 Aligned_cols=81 Identities=17% Similarity=0.120 Sum_probs=45.2
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc-
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK- 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~- 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.++...++
T Consensus 7 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLC-KAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS-----SQESEVRSLFEQVDREQ 80 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCC-----CCHHHHHHHHHHHHHhc
Confidence 35555544443345555666 5788887765433333222 233477777777763 3678888877765432
Q ss_pred CCCeeEEEEecC
Q 013892 268 GITVRALVVINP 279 (434)
Q Consensus 268 g~~~~~i~l~~p 279 (434)
..+...++ +|.
T Consensus 81 ~g~id~lv-nnA 91 (260)
T 2qq5_A 81 QGRLDVLV-NNA 91 (260)
T ss_dssp TTCCCEEE-ECC
T ss_pred CCCceEEE-ECC
Confidence 22455444 444
No 383
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=60.91 E-value=82 Score=27.73 Aligned_cols=98 Identities=15% Similarity=0.053 Sum_probs=49.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.. ....+..+ . ..+.+|- -|.+.+++.++...+...+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFA-REGALVALCDLRPEG-KEVAEAIG-G-AFFQVDL-----EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666555444445556666 578777765433333 44444443 2 4444442 2677777777654333224
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++-+-...+.+ ...+.++++++.+
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554432222222 2345666665544
No 384
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=60.82 E-value=26 Score=32.01 Aligned_cols=99 Identities=12% Similarity=0.143 Sum_probs=52.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCC---EEEEcCCCChhHHHHHHHc-----CCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSEND---GILCPIPQYPLYSASIALH-----GGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd---~Vlv~~p~y~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
.+++|.|+...-..+.+.|. ..|. .|++..-.-.......+.. |.++..+.+|-. |.+.+++.++.
T Consensus 35 ~~lVTGas~GIG~aia~~l~-~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 108 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYL-EASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIEN 108 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHHT
T ss_pred EEEEecCCChHHHHHHHHHH-HcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHHH
Confidence 45555555433344455555 3454 7776655444443333322 678888877643 66777777776
Q ss_pred HHhcCCCeeEEEEecCC-C-CCcc--CCCHHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPG-N-PTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~-N-PtG~--~~~~~~l~~i~~ 297 (434)
..++..+...+| +|.. . +.+. .++.++|+++.+
T Consensus 109 ~~~~~g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~~ 145 (287)
T 3rku_A 109 LPQEFKDIDILV-NNAGKALGSDRVGQIATEDIQDVFD 145 (287)
T ss_dssp SCGGGCSCCEEE-ECCCCCCCCCCTTSCCHHHHHHHHH
T ss_pred HHHhcCCCCEEE-ECCCcCCCCCCcccCCHHHHHHHHH
Confidence 433333455544 4442 1 1221 346777776554
No 385
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=60.58 E-value=49 Score=29.11 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=51.3
Q ss_pred EEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCee
Q 013892 193 IFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVR 272 (434)
Q Consensus 193 i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~ 272 (434)
+++|.|+...-..+.+.|. ..|..|++.+-.-.......+.. .....+.+|- -|.+.+++.++...++..+..
T Consensus 5 vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 5 VIVTGGGHGIGKQICLDFL-EAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHTTC-TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHhc-ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 5666555444445556666 57888887654433333333322 2344555553 367788887776544433555
Q ss_pred EEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 273 ALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 273 ~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
.++-+-...+.+. ..+.++++++.+
T Consensus 78 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 78 VLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp EEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5554422222222 455677766544
No 386
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=60.51 E-value=8.1 Score=41.40 Aligned_cols=118 Identities=13% Similarity=0.230 Sum_probs=69.8
Q ss_pred CCCCCCCEEEcCChHHHHHHHHHHHhc--CC-CC-----EEEEcCCCCh-------------------hHHHHHHHcCCe
Q 013892 186 FPADPNDIFLTDGASPAVHMMMQLLIR--SE-ND-----GILCPIPQYP-------------------LYSASIALHGGT 238 (434)
Q Consensus 186 ~~~~~~~i~~t~G~~~al~~~l~~l~~--~~-gd-----~Vlv~~p~y~-------------------~~~~~~~~~g~~ 238 (434)
+.++.+.|.++.....++...++.|.. .. +. ..+...|.|+ .+.+.+..++..
T Consensus 264 L~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN 343 (858)
T 1c7s_A 264 LKIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLN 343 (858)
T ss_dssp EEECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred EEEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 345667888887776666655555431 12 22 2344456665 244455667777
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEE-----EecC---CC--CCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALV-----VINP---GN--PTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~-----l~~p---~N--PtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
...+.+.++.+|.+.++.+-+.-+. | .-+.-- ...| ++ +.|..++.+++++|++.|+++|+-||-
T Consensus 344 ~lh~HltDdqgwriei~~yP~Lt~~----G-a~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 344 KFHFHLSDDEGWRIEIPGLPELTEV----G-GQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEEEECEETTEECBCCTTCTHHHHT----T-TEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEEeccCccccccccCCchhhhc----c-ccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7777776666777766554432211 1 000000 0011 11 346789999999999999999998874
No 387
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=59.73 E-value=58 Score=29.04 Aligned_cols=80 Identities=14% Similarity=-0.001 Sum_probs=42.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChhHHHHHHH---c-CCeEEEEecCCCCCCCCCH----HHHHHHHH
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYSASIAL---H-GGTLVPYYLDEATGWGLET----SEVKKQLE 262 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~~~~~~~~---~-g~~~~~~~~~~~~~~~~d~----~~l~~~l~ 262 (434)
.+++|.|+...-..+.+.|. ..|..|++..- .-.......+. . |.++..+.+|-. |. +.+++.++
T Consensus 13 ~~lVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLH-QQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCEDIID 86 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHHHHHH
Confidence 45666555444445555666 57878877644 32223322222 2 667777776643 44 66666666
Q ss_pred HHHhcCCCeeEEEEe
Q 013892 263 AAKAKGITVRALVVI 277 (434)
Q Consensus 263 ~~~~~g~~~~~i~l~ 277 (434)
...+...+...+|-+
T Consensus 87 ~~~~~~g~id~lv~n 101 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNN 101 (276)
T ss_dssp HHHHHHSCCCEEEEC
T ss_pred HHHHhcCCCCEEEEC
Confidence 543332245555433
No 388
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=59.45 E-value=1e+02 Score=27.89 Aligned_cols=110 Identities=15% Similarity=0.053 Sum_probs=57.6
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHHhcCCC--CEEEEcCCCChhHHHHHHHcC-CeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 187 PADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~al~~~l~~l~~~~g--d~Vlv~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
++++++|++..-+..+...+..++. .+. ..|+........-........ -..+.+-....+ -.+.++..++..+.
T Consensus 153 ~id~~ri~l~GfS~Gg~~a~~~a~~-~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~D-~~Vp~~~~~~~~~~ 230 (285)
T 4fhz_A 153 GLPPEALALVGFSQGTMMALHVAPR-RAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDAD-PVVPFADMSLAGEA 230 (285)
T ss_dssp TCCGGGEEEEEETHHHHHHHHHHHH-SSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEETTC-SSSCTHHHHHHHHH
T ss_pred CCCccceEEEEeCHHHHHHHHHHHh-CcccCceEEEeecCccCchhhhhhhhhcCcccceeeCCC-CCcCHHHHHHHHHH
Confidence 3688899887655555544444443 333 345544433332222222222 222333222222 24556666655555
Q ss_pred HHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 264 AKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
.++.|.++...++.. .|..++.++++.+.+|.+++
T Consensus 231 L~~~g~~~~~~~y~g----~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 231 LAEAGFTTYGHVMKG----TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHHTTCCEEEEEETT----CCSSCCHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEECC----CCCCCCHHHHHHHHHHHHHH
Confidence 555555554443322 34457889999999999886
No 389
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=59.27 E-value=75 Score=27.90 Aligned_cols=80 Identities=11% Similarity=0.007 Sum_probs=42.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcC-CCCEEEEcCCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRS-ENDGILCPIPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~-~gd~Vlv~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. . .|..|++..-.-...... +...|.++..+.+|-. |.+.+++.++...++
T Consensus 6 ~vlITGasggIG~~~a~~L~-~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLC-RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID-----DLQSIRALRDFLRKE 79 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCC-----CHHHHHHHHHHHHHh
Confidence 45566554443345555565 5 677777765443333222 2333656666666532 677777777654433
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..++..||-+
T Consensus 80 ~g~id~li~~ 89 (276)
T 1wma_A 80 YGGLDVLVNN 89 (276)
T ss_dssp HSSEEEEEEC
T ss_pred cCCCCEEEEC
Confidence 2256555543
No 390
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=59.13 E-value=59 Score=28.27 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=44.7
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
..+++|.|+...-..+.+.|. ..|..|++. ...-.... ..++..|.++..+..|-. |.+.+++.++...+
T Consensus 6 ~~vlItGasggiG~~~a~~l~-~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLG-NMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVK-----NPEDVENMVKTAMD 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTT-----SHHHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 346666555444445555666 577777765 33222222 233445777777776633 67788777765433
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
...+...|+-+
T Consensus 80 ~~~~~d~vi~~ 90 (247)
T 2hq1_A 80 AFGRIDILVNN 90 (247)
T ss_dssp HHSCCCEEEEC
T ss_pred hcCCCCEEEEC
Confidence 32245555543
No 391
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=58.57 E-value=21 Score=31.76 Aligned_cols=96 Identities=22% Similarity=0.175 Sum_probs=53.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-. -....+..+.++..+.+|-. |.+.+++.++...+-| +.
T Consensus 11 ~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~g-~i 80 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLL-DAGAQVVVLDIR---GEDVVADLGDRARFAAADVT-----DEAAVASALDLAETMG-TL 80 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HHTCEEEEEESS---CHHHHHHTCTTEEEEECCTT-----CHHHHHHHHHHHHHHS-CE
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCc---hHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHhC-CC
Confidence 45555555443344555666 577777765442 23344556777888777643 6777777776544422 56
Q ss_pred eEEEEecCC-CCCcc------CCCHHHHHHHHHH
Q 013892 272 RALVVINPG-NPTGQ------VLAEENQRAIVDF 298 (434)
Q Consensus 272 ~~i~l~~p~-NPtG~------~~~~~~l~~i~~~ 298 (434)
..++ +|.. ...+. .++.++++++.+.
T Consensus 81 d~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 81 RIVV-NCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EEEE-ECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CEEE-ECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 5544 3332 11111 2677777776653
No 392
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=58.53 E-value=97 Score=27.29 Aligned_cols=132 Identities=14% Similarity=0.121 Sum_probs=67.0
Q ss_pred CCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCC--CEEEEcCCCChhHHHHHHH----cCCe
Q 013892 165 HSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASIAL----HGGT 238 (434)
Q Consensus 165 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~g--d~Vlv~~p~y~~~~~~~~~----~g~~ 238 (434)
...|..+..+.+.+++......++++++|+++.=++.+...+..++. .+. ..|+......+........ ....
T Consensus 106 d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~-~~~~~a~~i~~sG~lp~~~~~~~~~~~~~~~~ 184 (246)
T 4f21_A 106 DVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAIT-SQRKLGGIMALSTYLPAWDNFKGKITSINKGL 184 (246)
T ss_dssp CCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTT-CSSCCCEEEEESCCCTTHHHHSTTCCGGGTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHh-CccccccceehhhccCccccccccccccccCC
Confidence 34567777777777765443335788899876433333333322222 232 4455544433333222111 1112
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 239 LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 239 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
++.+-.... +--+.++.-++..+..++.|.++..... |+ .|-.++.++++.+.+|.++.
T Consensus 185 Pvl~~HG~~-D~vVp~~~~~~~~~~L~~~g~~v~~~~y--~g--~gH~i~~~~l~~~~~fL~k~ 243 (246)
T 4f21_A 185 PILVCHGTD-DQVLPEVLGHDLSDKLKVSGFANEYKHY--VG--MQHSVCMEEIKDISNFIAKT 243 (246)
T ss_dssp CEEEEEETT-CSSSCHHHHHHHHHHHHTTTCCEEEEEE--SS--CCSSCCHHHHHHHHHHHHHH
T ss_pred chhhcccCC-CCccCHHHHHHHHHHHHHCCCCeEEEEE--CC--CCCccCHHHHHHHHHHHHHH
Confidence 233333222 2256666666665555555545443332 21 35567899999999998764
No 393
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=57.91 E-value=92 Score=27.73 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=42.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... ++..| .++..+..|- -|.+.+++.++...+
T Consensus 34 ~vlVTGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALV-QQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-----SNEEDILSMFSAIRS 107 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 45666554443345555666 5787887765433322222 23333 4566666653 367788777765433
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
+..+...||-+
T Consensus 108 ~~g~iD~vi~~ 118 (279)
T 1xg5_A 108 QHSGVDICINN 118 (279)
T ss_dssp HHCCCSEEEEC
T ss_pred hCCCCCEEEEC
Confidence 32245555544
No 394
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=56.61 E-value=92 Score=27.61 Aligned_cols=97 Identities=12% Similarity=0.064 Sum_probs=51.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---c--CCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H--GGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+...-..+.+.|. ..|-.|++..-.-.......+. . +..+..+..|-. |.+.+++.+++.
T Consensus 11 k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~- 83 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLV-AEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-----TEQGCQDVIEKY- 83 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT-----SHHHHHHHHHHC-
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC-----CHHHHHHHHHhc-
Confidence 346666655444445556666 5788888776554433333322 2 456666766533 667777766542
Q ss_pred hcCCCeeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
| +...++-+-.....+ ...+.++|+++.+
T Consensus 84 --g-~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 84 --P-KVDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp --C-CCSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred --C-CCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 1 455544332211111 2346677665544
No 395
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=56.09 E-value=72 Score=28.13 Aligned_cols=99 Identities=12% Similarity=0.091 Sum_probs=51.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHHHH---HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSAS---IALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++. ...-...... +...+.++..+.+|-. |.+.+++.++...++
T Consensus 9 ~vlVTGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 9 HALITAGTKGLGKQVTEKLL-AKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT-----KKEDLHKIVEEAMSH 82 (264)
T ss_dssp EEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 45555555444445556666 578777765 3322222222 2233566777777633 678888887765444
Q ss_pred CCCeeEEEEecCC--C-CCc--cCCCHHHHHHHHH
Q 013892 268 GITVRALVVINPG--N-PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~--N-PtG--~~~~~~~l~~i~~ 297 (434)
..+...++ +|.. . +.+ ...+.+++++..+
T Consensus 83 ~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T 3i4f_A 83 FGKIDFLI-NNAGPYVFERKKLVDYEEDEWNEMIQ 116 (264)
T ss_dssp HSCCCEEE-CCCCCCCCSCCCGGGCCHHHHHHHHH
T ss_pred hCCCCEEE-ECCcccccCCCccccCCHHHHHHHHH
Confidence 33555544 4433 1 111 2345666655444
No 396
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=55.74 E-value=39 Score=29.67 Aligned_cols=68 Identities=9% Similarity=-0.017 Sum_probs=41.9
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
...+++|.|+...-..+.+.|. ..|..|++..-.-.......+..+..+..+..|-. |.+.+++.+++
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 81 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLH-KLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLA-----NKEECSNLISK 81 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT-----SHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCC-----CHHHHHHHHHh
Confidence 3456666655444445556666 57888888776655555565666656666655532 67777777754
No 397
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=55.26 E-value=78 Score=27.77 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=48.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc---C-------CeEEEEecCCCCCCCCCHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH---G-------GTLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~---g-------~~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+.. | .++..+..|- -|.+.+++.
T Consensus 8 k~vlITGasggiG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~ 81 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLA-GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARAARCL 81 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHHHHHH
Confidence 346666555444445555666 57878877654433333333222 2 3445555543 267778777
Q ss_pred HHHHHhcCCCe-eEEEEecCC-CCCc--cCCCHHHHHHHH
Q 013892 261 LEAAKAKGITV-RALVVINPG-NPTG--QVLAEENQRAIV 296 (434)
Q Consensus 261 l~~~~~~g~~~-~~i~l~~p~-NPtG--~~~~~~~l~~i~ 296 (434)
++...+...+. ..|+ ++.. .+.+ ...+.+++++..
T Consensus 82 ~~~~~~~~g~i~d~vi-~~Ag~~~~~~~~~~~~~~~~~~~ 120 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVV-SCAGITQDEFLLHMSEDDWDKVI 120 (264)
T ss_dssp HHHHHHHHSSCCSEEE-ECCCCCCCBCGGGCCHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEE-ECCCcCCCcchhhCCHHHHHHHH
Confidence 76653322233 5444 4432 2222 124566665544
No 398
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=52.78 E-value=72 Score=28.38 Aligned_cols=99 Identities=6% Similarity=-0.053 Sum_probs=51.6
Q ss_pred CEEEcCC-hHHHH-HHHHHHHhcCCCCEEEEcCCCChh-HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDG-ASPAV-HMMMQLLIRSENDGILCPIPQYPL-YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G-~~~al-~~~l~~l~~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++|.| ++.+| ..+.+.|. ..|-.|++..-.-.. .....+..+.++..+.+|- -|.+.+++.++...++.
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQ-EQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV-----QNEEHLASLAGRVTEAI 82 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCchHHHHHHHHH-HCCCEEEEEecChHHHHHHHHHhcCCCceEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 4666665 14444 34445555 578777776544332 2333444455555566553 26777777777654332
Q ss_pred C---CeeEEEEecCCC-C-----Cc--cCCCHHHHHHHHH
Q 013892 269 I---TVRALVVINPGN-P-----TG--QVLAEENQRAIVD 297 (434)
Q Consensus 269 ~---~~~~i~l~~p~N-P-----tG--~~~~~~~l~~i~~ 297 (434)
. +...+| +|..- + .+ ...+.+++++..+
T Consensus 83 g~~~~iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (269)
T 2h7i_A 83 GAGNKLDGVV-HSIGFMPQTGMGINPFFDAPYADVSKGIH 121 (269)
T ss_dssp CTTCCEEEEE-ECCCCCCGGGSTTSCGGGCCHHHHHHHHH
T ss_pred CCCCCceEEE-ECCccCccccccccccccCCHHHHHHHHH
Confidence 2 455444 44421 1 11 2346677776554
No 399
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=52.56 E-value=1.2e+02 Score=27.17 Aligned_cols=101 Identities=12% Similarity=0.019 Sum_probs=50.5
Q ss_pred CCEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+ ...-..+.+.|. ..|..|++..-.- ......+...+.++..+.+|- -|.+.+++.++...++
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMH-REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDV-----ISDQEIKDLFVELGKV 100 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHH-HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH-HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeec-----CCHHHHHHHHHHHHHH
Confidence 345565543 223334445555 4677777654332 122222333333455666653 2678888888776554
Q ss_pred CCCeeEEEEecCCCCC----ccC---CCHHHHHHHHH
Q 013892 268 GITVRALVVINPGNPT----GQV---LAEENQRAIVD 297 (434)
Q Consensus 268 g~~~~~i~l~~p~NPt----G~~---~~~~~l~~i~~ 297 (434)
..+...+|.+-...+. +.. .+.+++++..+
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHD 137 (280)
T ss_dssp CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHH
T ss_pred cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHH
Confidence 4456655544222221 111 56666665544
No 400
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=52.33 E-value=60 Score=28.91 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=47.9
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.. +.++..+.+|- -|.+.+++.++...++..+.
T Consensus 10 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~--------~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFV-DEGSKVIDLSIHDPG--------EAKYDHIECDV-----TNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHH-HTTCEEEEEESSCCC--------SCSSEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEecCccc--------CCceEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46666555444455556666 578777764322111 33445555542 26777877776654332245
Q ss_pred eEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 272 RALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 272 ~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..++-+-.....+. ..+.++++++.+
T Consensus 76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 76 SVLVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55554322222222 246667766654
No 401
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=51.66 E-value=1.3e+02 Score=26.80 Aligned_cols=80 Identities=8% Similarity=-0.055 Sum_probs=43.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHcCC-eEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSAS---IALHGG-TLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~---~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-...... +...|. ++..+.+|-. |.+.+++.++...++
T Consensus 30 ~vlITGasggIG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLA-KMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTME-----DMTFAEQFVAQAGKL 103 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCC-----CHHHHHHHHHHHHHH
Confidence 46666555444444555565 5787887765443333322 223343 6667766533 677777777654333
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...++.+
T Consensus 104 ~g~iD~li~n 113 (286)
T 1xu9_A 104 MGGLDMLILN 113 (286)
T ss_dssp HTSCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 2256655544
No 402
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=51.56 E-value=99 Score=28.44 Aligned_cols=89 Identities=11% Similarity=0.203 Sum_probs=49.3
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|.. ++-+.+.+.++...+.-
T Consensus 83 pViaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 83 PVIAGTGSNNTHASIDLTKKATE-VGVDAVMLVAPYYNK------------------------PSQEGMYQHFKAIAEST 137 (301)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHH-TTCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHHTC
T ss_pred eEEeCCCCCCHHHHHHHHHHHHh-cCCCEEEEcCCCCCC------------------------CCHHHHHHHHHHHHHhc
Confidence 37777665 555655544432 234899999998742 12344444444322211
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+..+++.++|. .||..++.+.+.+|++ --++.=|=|.
T Consensus 138 -~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 174 (301)
T 1xky_A 138 -PLPVMLYNVPG-RSIVQISVDTVVRLSE---IENIVAIKDA 174 (301)
T ss_dssp -SSCEEEEECHH-HHSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred -CCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEcC
Confidence 34466666666 3788888666665542 2344445454
No 403
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=51.42 E-value=27 Score=35.46 Aligned_cols=79 Identities=11% Similarity=-0.001 Sum_probs=52.6
Q ss_pred CCCCEEEEcCCCChhH-------HHHHHHcCCeEEEEecCC-CCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 213 SENDGILCPIPQYPLY-------SASIALHGGTLVPYYLDE-ATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 213 ~~gd~Vlv~~p~y~~~-------~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
+++|.|++...++++. ...+...|++++...... .-.-.-|.++|...++.. +++-++..+.-
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~-----~Pk~vipvHGe---- 407 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLT-----TPRFFLPWHGE---- 407 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHH-----CCSEEEEESBC----
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhc-----CCCEEEEEcCC----
Confidence 5889999998777654 233455788887532000 001145889999999887 78888888642
Q ss_pred cCCCHHHHHHHHHHHHHcCC
Q 013892 285 QVLAEENQRAIVDFCKKEGL 304 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~ 304 (434)
...+.+..+++++.|+
T Consensus 408 ----~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 408 ----VRHQMNFKWLAESMSR 423 (562)
T ss_dssp ----HHHHHHHHHHHHTSSS
T ss_pred ----HHHHHHHHHHHHHcCC
Confidence 2346777788887664
No 404
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=51.04 E-value=94 Score=27.07 Aligned_cols=100 Identities=10% Similarity=0.019 Sum_probs=52.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCCChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQYPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++. ...-..... .+...+.++..+..|-. |.+.+++.++...++
T Consensus 9 ~vlITGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 9 VALVTGASRGIGRAIAKRLA-NDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE-----SLHGVEALYSSLDNE 82 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcC-----CHHHHHHHHHHHHHH
Confidence 45666555444455556666 578777663 433333322 33445778887777643 566666665543221
Q ss_pred ------CCCeeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 268 ------GITVRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 268 ------g~~~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
..+...++.+-...+.+. ..+.++++++.+
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 120 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHh
Confidence 113555444322223332 346677776654
No 405
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=51.01 E-value=98 Score=28.27 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=41.8
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-. ..-|.|++..|.|.. .+-+.+.+.++...+.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~ia~a~ 125 (292)
T 2vc6_A 71 PVIAGAGSNSTAEAIAFVRHAQN-AGADGVLIVSPYYNK------------------------PTQEGIYQHFKAIDAAS 125 (292)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHHHC
T ss_pred cEEEecCCccHHHHHHHHHHHHH-cCCCEEEEcCCCCCC------------------------CCHHHHHHHHHHHHHhC
Confidence 37766665 555655544432 244899999998842 12333443333221111
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+...++.++|. .||..++.+.+.+|+
T Consensus 126 -~lPiilYn~P~-~tg~~l~~~~~~~La 151 (292)
T 2vc6_A 126 -TIPIIVYNIPG-RSAIEIHVETLARIF 151 (292)
T ss_dssp -SSCEEEEECHH-HHSCCCCHHHHHHHH
T ss_pred -CCCEEEEeCcc-ccCcCCCHHHHHHHH
Confidence 34455656665 377777755555543
No 406
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=50.72 E-value=56 Score=29.19 Aligned_cols=81 Identities=9% Similarity=-0.023 Sum_probs=43.9
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-. .....++..+.++..+..|- -|.+.+++.++...++
T Consensus 35 k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYA-QAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI-----SDPKSVEETISQQEKD 108 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHH-HHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeec-----CCHHHHHHHHHHHHHH
Confidence 456666554443344555565 46777776542222 22333344577777777663 3677887777664333
Q ss_pred CCCeeEEEEe
Q 013892 268 GITVRALVVI 277 (434)
Q Consensus 268 g~~~~~i~l~ 277 (434)
..+...|+.+
T Consensus 109 ~g~id~li~~ 118 (279)
T 3ctm_A 109 FGTIDVFVAN 118 (279)
T ss_dssp HSCCSEEEEC
T ss_pred hCCCCEEEEC
Confidence 2246655544
No 407
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=50.46 E-value=1e+02 Score=28.49 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=21.7
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYP 226 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~ 226 (434)
-|+++.|+ .+++.++-.+-- ..-|.|++..|.|.
T Consensus 83 pViaGvg~~st~~ai~la~~A~~-~Gadavlv~~P~y~ 119 (306)
T 1o5k_A 83 PVIVGAGTNSTEKTLKLVKQAEK-LGANGVLVVTPYYN 119 (306)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHH-HTCSEEEEECCCSS
T ss_pred eEEEcCCCccHHHHHHHHHHHHh-cCCCEEEECCCCCC
Confidence 37777765 555655544432 24489999999884
No 408
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=50.38 E-value=22 Score=36.25 Aligned_cols=102 Identities=15% Similarity=0.214 Sum_probs=64.1
Q ss_pred CEEEcCChHHHHHHHHHHHhc----CC-CC-------EEEEcCCCCh-------------------hHHHHHHHcCCeEE
Q 013892 192 DIFLTDGASPAVHMMMQLLIR----SE-ND-------GILCPIPQYP-------------------LYSASIALHGGTLV 240 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~----~~-gd-------~Vlv~~p~y~-------------------~~~~~~~~~g~~~~ 240 (434)
.|.++.+...++...++.|.. +. +. ..+...|.|+ .+.+.+..++.++.
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 477888777776666666541 11 11 2344556654 23445556677777
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 241 PYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 241 ~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
.+.+.++.+|.+.++..-+.-+. | . ...|..++.+++++|++.|+++|+-||-
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~----G-a----------~~~~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKF----G-A----------LSPQKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHH----H-S----------SSSSSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeecCcCceeccccCcchhcc----C-C----------cCCCCCcCHHHHHHHHHHHHHhCCceee
Confidence 77777766777765544332211 0 0 1135689999999999999999998873
No 409
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=50.28 E-value=1.4e+02 Score=26.56 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=50.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.......+... .+..+.+|- -|.+.+++.++...++..+
T Consensus 10 k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFV-NSGARVVICDKDESGGRALEQELP-GAVFILCDV-----TQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 346666655444455566666 578788776543333333333332 245555553 2677787777664433224
Q ss_pred eeEEEEecCCC--CCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGN--PTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~N--PtG--~~~~~~~l~~i~~ 297 (434)
...++ +|... +.+ ...+.++++++.+
T Consensus 83 iD~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 83 LDCVV-NNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCCCcccCCHHHHHHHHH
Confidence 55554 44321 112 1245666665443
No 410
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=49.37 E-value=82 Score=28.78 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=41.8
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|.. ++-+.+.+..+...+.-
T Consensus 71 pviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~ia~a~ 125 (289)
T 2yxg_A 71 QVIAGAGSNCTEEAIELSVFAED-VGADAVLSITPYYNK------------------------PTQEGLRKHFGKVAESI 125 (289)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHH-HTCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHHHC
T ss_pred cEEEeCCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCCC------------------------CCHHHHHHHHHHHHHhc
Confidence 37777665 555555544432 244899999998741 12333433333321111
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+...++.++|.. ||..++.+.+.+|+
T Consensus 126 -~lPiilYn~P~~-tg~~l~~~~~~~La 151 (289)
T 2yxg_A 126 -NLPIVLYNVPSR-TAVNLEPKTVKLLA 151 (289)
T ss_dssp -SSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred -CCCEEEEeCccc-cCcCCCHHHHHHHH
Confidence 344566666664 77777755555543
No 411
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=49.14 E-value=65 Score=29.00 Aligned_cols=98 Identities=17% Similarity=0.007 Sum_probs=50.1
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCC-CChhHH---HHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhc
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIP-QYPLYS---ASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAK 267 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p-~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 267 (434)
.+++|.|+...-..+.+.|. ..|..|++..- .-.... ..+...|.++..+.+|-. |.+.+++.++...++
T Consensus 31 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALA-ASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLA-----DLSSHQATVDAVVAE 104 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTT-----SGGGHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 45566555444445556666 57878776542 222222 233445778888877643 556666666554333
Q ss_pred CCCeeEEEEecCC--CCCc--cCCCHHHHHHH
Q 013892 268 GITVRALVVINPG--NPTG--QVLAEENQRAI 295 (434)
Q Consensus 268 g~~~~~i~l~~p~--NPtG--~~~~~~~l~~i 295 (434)
..+...+|-+-.. .+.+ ..++.++++++
T Consensus 105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 136 (280)
T 4da9_A 105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTI 136 (280)
T ss_dssp HSCCCEEEEECC------CCGGGCCHHHHHHH
T ss_pred cCCCCEEEECCCccccCCCChhhCCHHHHHHH
Confidence 2256655544221 1111 12466666554
No 412
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=48.97 E-value=1.9e+02 Score=27.91 Aligned_cols=81 Identities=11% Similarity=0.009 Sum_probs=47.1
Q ss_pred CCCEEEcCChHHHHHHH---HHHHhcCCCCEEEEcCCC-C--------------hhHHHHHHHcCCeEEEEecCCCCCCC
Q 013892 190 PNDIFLTDGASPAVHMM---MQLLIRSENDGILCPIPQ-Y--------------PLYSASIALHGGTLVPYYLDEATGWG 251 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~---l~~l~~~~gd~Vlv~~p~-y--------------~~~~~~~~~~g~~~~~~~~~~~~~~~ 251 (434)
...+++.+|++.+|-.. ...+. ..|-.|++..-. - ......++..|.++..+.+|-
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala-~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv----- 132 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFG-GPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA----- 132 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHS-SSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHH-hCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC-----
Confidence 34455555555566554 33444 467777553211 0 123334556788888888774
Q ss_pred CCHHHHHHHHHHHHhcCCCeeEEEE
Q 013892 252 LETSEVKKQLEAAKAKGITVRALVV 276 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g~~~~~i~l 276 (434)
-|.+.+++.++...++..+...+|-
T Consensus 133 td~~~v~~~v~~i~~~~G~IDiLVn 157 (418)
T 4eue_A 133 FSNETKDKVIKYIKDEFGKIDLFVY 157 (418)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3788888888877665446665543
No 413
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=48.97 E-value=1e+02 Score=26.46 Aligned_cols=80 Identities=8% Similarity=0.007 Sum_probs=41.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCC--CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~g--d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
.+++|.|+...-..+.+.|. ..| ..|++..-.-.......+..+.++..+.+|-. |.+.+++.++...+...
T Consensus 5 ~vlItGasggiG~~la~~l~-~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLV-KDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT-----CDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHH-TCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTT-----CHHHHHHHHHHHHHHHG
T ss_pred EEEEecCCchHHHHHHHHHH-hcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecC-----CHHHHHHHHHHHHHhcC
Confidence 35666555444445566666 567 67776554332222221112556666666532 66777777765433211
Q ss_pred --CeeEEEEe
Q 013892 270 --TVRALVVI 277 (434)
Q Consensus 270 --~~~~i~l~ 277 (434)
++..||.+
T Consensus 79 ~~~id~li~~ 88 (250)
T 1yo6_A 79 SDGLSLLINN 88 (250)
T ss_dssp GGCCCEEEEC
T ss_pred CCCCcEEEEC
Confidence 35555544
No 414
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=48.47 E-value=1.1e+02 Score=30.48 Aligned_cols=99 Identities=11% Similarity=0.066 Sum_probs=55.1
Q ss_pred CEEEcCChHHHHH-HHHHHHhcCCCC-EEEEcCC------CChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 192 DIFLTDGASPAVH-MMMQLLIRSEND-GILCPIP------QYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 192 ~i~~t~G~~~al~-~~l~~l~~~~gd-~Vlv~~p------~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
.+++.+|++.+|- .+.+.|. ..|. .|++..- .-......++..|.++..+.+|-. |.+.+.+.++.
T Consensus 240 ~~vLITGgsgGIG~alA~~La-~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt-----d~~~v~~~~~~ 313 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLA-EQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAA-----DREALAALLAE 313 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHH-HTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHT
T ss_pred CEEEEECCCCchHHHHHHHHH-HCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHHHHH
Confidence 5554445555554 4445555 4564 5555322 122344456667999999988743 78899988877
Q ss_pred HHhcCCCeeEEEEecCCC-CCcc--CCCHHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPGN-PTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~N-PtG~--~~~~~~l~~i~~ 297 (434)
..+++ +...||-+-... ..+. .++.++++++.+
T Consensus 314 i~~~g-~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 314 LPEDA-PLTAVFHSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp CCTTS-CEEEEEECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HHHhC-CCeEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 54443 455554332221 2222 346666666554
No 415
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=48.26 E-value=71 Score=28.65 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=50.5
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcC--CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHG--GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......+... .++..+.+|- -|.+.+++.++...++..
T Consensus 23 ~vlVTGas~gIG~aia~~La-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 23 TLFITGATSGFGEACARRFA-EAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp EEEESSTTTSSHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHTCCGGGS
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHhC
Confidence 45555544433344555566 578888776544333333333332 3566666653 378888888876433322
Q ss_pred CeeEEEEecCCC--CCc--cCCCHHHHHHHH
Q 013892 270 TVRALVVINPGN--PTG--QVLAEENQRAIV 296 (434)
Q Consensus 270 ~~~~i~l~~p~N--PtG--~~~~~~~l~~i~ 296 (434)
+...++ +|..- +.+ ...+.++++++.
T Consensus 97 ~iD~lv-nnAG~~~~~~~~~~~~~~~~~~~~ 126 (272)
T 2nwq_A 97 TLRGLI-NNAGLALGTDPAQSCDLDDWDTMV 126 (272)
T ss_dssp SCCEEE-ECCCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCCEEE-ECCCCCCCCCCcccCCHHHHHHHH
Confidence 455544 44321 112 134556665543
No 416
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=48.22 E-value=1e+02 Score=28.12 Aligned_cols=78 Identities=14% Similarity=0.220 Sum_probs=41.8
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- ..-|.|++..|.|.. ++-+.+.+..+...+.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~va~a~ 125 (294)
T 2ehh_A 71 KVIAGTGGNATHEAVHLTAHAKE-VGADGALVVVPYYNK------------------------PTQRGLYEHFKTVAQEV 125 (294)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHH-TTCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHHHC
T ss_pred cEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCCC------------------------CCHHHHHHHHHHHHHhc
Confidence 37777665 555655544432 234899999998842 12233333333221111
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+...++.++|.. ||..++.+.+.+|+
T Consensus 126 -~lPiilYn~P~~-tg~~l~~~~~~~La 151 (294)
T 2ehh_A 126 -DIPIIIYNIPSR-TCVEISVDTMFKLA 151 (294)
T ss_dssp -CSCEEEEECHHH-HSCCCCHHHHHHHH
T ss_pred -CCCEEEEeCCcc-cCcCCCHHHHHHHH
Confidence 334556666654 77777755555543
No 417
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=48.07 E-value=54 Score=29.35 Aligned_cols=98 Identities=13% Similarity=0.023 Sum_probs=49.8
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-. ..-+.....+..+.+|- -|.+.+++.++...+...+
T Consensus 17 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFS-EEGHPLLLLARRVE---RLKALNLPNTLCAQVDV-----TDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCHH---HHHTTCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCHH---HHHHhhcCCceEEEecC-----CCHHHHHHHHHHHHHHCCC
Confidence 345566555444444555666 57777776543321 11112223455555553 3677888877765444335
Q ss_pred eeEEEEecCCCCCcc--CCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTGQ--VLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~--~~~~~~l~~i~~ 297 (434)
...+|-+-...+.+. ..+.++|+++.+
T Consensus 88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 88 ADAIVNNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp EEEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 665554422222222 346667765544
No 418
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=47.39 E-value=82 Score=27.81 Aligned_cols=100 Identities=7% Similarity=-0.022 Sum_probs=49.9
Q ss_pred CCCEEEcCChH--HHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCC-eEEEEecCCCCCCCCCHHHHHHHHHH
Q 013892 190 PNDIFLTDGAS--PAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGG-TLVPYYLDEATGWGLETSEVKKQLEA 263 (434)
Q Consensus 190 ~~~i~~t~G~~--~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~ 263 (434)
...+++|.|+. ..-..+.+.|. ..|.+|++..-.-. .........+. ++..+.+|-. |.+.+++.++.
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~ 80 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-----NDAEIETCFAS 80 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-----SSHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-----CHHHHHHHHHH
Confidence 34566776552 23344555565 57878776643322 22233333343 5666666532 56677776665
Q ss_pred HHhcCCCeeEEEEecCCCCC-----c--cCCCHHHHHHHH
Q 013892 264 AKAKGITVRALVVINPGNPT-----G--QVLAEENQRAIV 296 (434)
Q Consensus 264 ~~~~g~~~~~i~l~~p~NPt-----G--~~~~~~~l~~i~ 296 (434)
..++..+...++ +|..... + ...+.+++++..
T Consensus 81 ~~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 119 (266)
T 3oig_A 81 IKEQVGVIHGIA-HCIAFANKEELVGEYLNTNRDGFLLAH 119 (266)
T ss_dssp HHHHHSCCCEEE-ECCCCCCGGGGSSCGGGCCHHHHHHHH
T ss_pred HHHHhCCeeEEE-EccccccccccccchhhccHHHHHHHH
Confidence 443322455444 4442211 1 235666666544
No 419
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=47.34 E-value=72 Score=29.28 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHhcCC--CeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc---C------CEEEEccCCCC
Q 013892 252 LETSEVKKQLEAAKAKGI--TVRALVVINPGNPTGQVLAEENQRAIVDFCKKE---G------LVLLADEVYQE 314 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~---~------~~li~Deay~~ 314 (434)
+..+.++..++.....+. +..+|. ||...+.+.++.+.+++++. + +.+++|-++.+
T Consensus 56 ~~~~ql~~~~~~~~~~~~~~~~daV~-------tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d 122 (300)
T 3zs7_A 56 MSLQEYDELMEGVRANNFLSNYRYIL-------TGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGD 122 (300)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCSEEE-------ECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC--
T ss_pred CCHHHHHHHHHHHHhcCCcccCCEEE-------ECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEcccccc
Confidence 345677777777654442 456777 99999999999888887764 3 79999987765
No 420
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=47.03 E-value=1e+02 Score=29.07 Aligned_cols=91 Identities=15% Similarity=0.146 Sum_probs=52.4
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|.. ..+-+.+.+.++...+..
T Consensus 94 pViaGvg~~st~eai~la~~A~~-~Gadavlv~~P~y~~-----------------------~~s~~~l~~~f~~IA~aa 149 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQK-VGAKGLMVIPRVLSR-----------------------GSVIAAQKAHFKAILSAA 149 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHH-HTCSEEEECCCCSSS-----------------------TTCHHHHHHHHHHHHHHS
T ss_pred cEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCccCC-----------------------CCCHHHHHHHHHHHHhhC
Confidence 37777665 555655544432 234899999998842 023344554444432201
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
.+..+++.++| .||..++.+.+.+|+ ++--+++=|=|.
T Consensus 150 ~~lPiilYn~P--~tg~~l~~e~~~~L~--a~~pnIvGiKds 187 (344)
T 2hmc_A 150 PEIPAVIYNSP--YYGFATRADLFFALR--AEHKNLVGFKEF 187 (344)
T ss_dssp TTSCEEEEEBG--GGTBCCCHHHHHHHH--HHCTTEEEEEEC
T ss_pred CCCcEEEEecC--ccCCCcCHHHHHHHH--hcCCCEEEEEcC
Confidence 14557777888 799999977766662 222355555554
No 421
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=46.93 E-value=84 Score=28.88 Aligned_cols=89 Identities=13% Similarity=0.148 Sum_probs=50.4
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- ..-|.|++..|.|.. ++-+.+.+..+...+.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~va~a~ 125 (297)
T 2rfg_A 71 PVIAGAGSNNPVEAVRYAQHAQQ-AGADAVLCVAGYYNR------------------------PSQEGLYQHFKMVHDAI 125 (297)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHH-HTCSEEEECCCTTTC------------------------CCHHHHHHHHHHHHHHC
T ss_pred eEEEccCCCCHHHHHHHHHHHHh-cCCCEEEEcCCCCCC------------------------CCHHHHHHHHHHHHHhc
Confidence 37777665 556655544432 244899999998842 12344444443322111
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+...++.++|.. ||..++.+.+.+|++ --++.=|=|.
T Consensus 126 -~lPiilYn~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 162 (297)
T 2rfg_A 126 -DIPIIVYNIPPR-AVVDIKPETMARLAA---LPRIVGVKDA 162 (297)
T ss_dssp -SSCEEEEECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred -CCCEEEEeCccc-cCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 345677777765 899999776666643 2344445554
No 422
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=46.89 E-value=97 Score=28.16 Aligned_cols=50 Identities=10% Similarity=0.147 Sum_probs=37.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+|-+|...+.++... ...+|+|... .++.++++++++.|++.|+-+++|-
T Consensus 127 dfi~d~~qi~ea~~~------GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSW------GADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHT------TCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHc------CCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 356777777765543 5667777642 4678899999999999999988875
No 423
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=46.74 E-value=45 Score=29.80 Aligned_cols=93 Identities=11% Similarity=0.049 Sum_probs=53.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCe
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITV 271 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~ 271 (434)
.+++|.|++..-..+.+.|. ..|-.|++.+-.-... .+..+.++..+.+|- -|.+.+++.+++. | +.
T Consensus 13 ~alVTGas~GIG~aia~~la-~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~---g-~i 79 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFA-ELGAEVVALGLDADGV---HAPRHPRIRREELDI-----TDSQRLQRLFEAL---P-RL 79 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSTTST---TSCCCTTEEEEECCT-----TCHHHHHHHHHHC---S-CC
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCHHHH---hhhhcCCeEEEEecC-----CCHHHHHHHHHhc---C-CC
Confidence 45555555444445556666 6788887765432211 122355677777663 3678888877653 2 45
Q ss_pred eEEEEecC-CCCCccCCCHHHHHHHHHH
Q 013892 272 RALVVINP-GNPTGQVLAEENQRAIVDF 298 (434)
Q Consensus 272 ~~i~l~~p-~NPtG~~~~~~~l~~i~~~ 298 (434)
. ++++|. -+.....++.++|+++.++
T Consensus 80 D-iLVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 80 D-VLVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp S-EEEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred C-EEEECCCCCCCcccCCHHHHHHHHHH
Confidence 4 445554 2333456788888887764
No 424
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=46.64 E-value=42 Score=30.09 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=53.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQY-PLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
..+++|.|++..-..+.+.|. ..|-.|++.+-.- ......++..|.+...+.+|-. |.+.+++.++. |
T Consensus 10 KvalVTGas~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~----g- 78 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLA-AAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTD----A- 78 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTT----T-
T ss_pred CEEEEeCcCCHHHHHHHHHHH-HcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHh----C-
Confidence 344555544444444555666 5787777655332 3455567778888888887643 22333333322 2
Q ss_pred CeeEEEEecCC-CCCc--cCCCHHHHHHHHHH
Q 013892 270 TVRALVVINPG-NPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 270 ~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~~ 298 (434)
+.. ++++|.. ++.+ .-++.++|+++.++
T Consensus 79 ~iD-iLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 79 GFD-ILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp CCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 454 4555552 2222 24678899888775
No 425
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=46.52 E-value=1e+02 Score=27.82 Aligned_cols=54 Identities=13% Similarity=-0.033 Sum_probs=29.3
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHHH----HcCCeEEEEecCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASIA----LHGGTLVPYYLDE 246 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~~~----~~g~~~~~~~~~~ 246 (434)
.+++|.|+...-..+.+.|. ..|-.|++.. -.-.......+ ..|.++..+.+|-
T Consensus 11 ~~lVTGas~GIG~aia~~la-~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl 69 (291)
T 1e7w_A 11 VALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 69 (291)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred EEEEECCCchHHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeec
Confidence 45666555444445556666 5787777755 33333322222 3466777776654
No 426
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=45.32 E-value=97 Score=28.31 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=43.6
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- ..-|.|++..|.|.. .+-+.+.+..+...+.-
T Consensus 72 pviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 72 PVIAGTGANATAEAISLTQRFND-SGIVGCLTVTPYYNR------------------------PSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp CEEEECCCSSHHHHHHHHHHTTT-SSCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHTTC
T ss_pred cEEEecCCccHHHHHHHHHHHHh-cCCCEEEECCCCCCC------------------------CCHHHHHHHHHHHHHhc
Confidence 37777766 444544433321 233899999998741 23344554444432221
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHH
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIV 296 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~ 296 (434)
+...++.++|. .||..++.+.+.+|+
T Consensus 127 -~lPiilYn~P~-~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 127 -DLPQILYNVPS-RTGCDLLPETVGRLA 152 (292)
T ss_dssp -SSCEEEECCHH-HHSCCCCHHHHHHHH
T ss_pred -CCCEEEEeCcc-hhccCCCHHHHHHHH
Confidence 34456666666 378888866666654
No 427
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=44.85 E-value=1.1e+02 Score=28.34 Aligned_cols=55 Identities=13% Similarity=-0.025 Sum_probs=29.4
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHHH----HcCCeEEEEecCCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPI-PQYPLYSASIA----LHGGTLVPYYLDEA 247 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~~~~----~~g~~~~~~~~~~~ 247 (434)
.+++|.|+...-..+.+.|. ..|-.|++.. -.-.......+ ..|.++..+.+|-.
T Consensus 48 ~~lVTGas~GIG~aia~~La-~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~ 107 (328)
T 2qhx_A 48 VALVTGAAKRLGRSIAEGLH-AEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107 (328)
T ss_dssp EEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCC
Confidence 45566555444455555666 5787777654 33333222222 34666777766543
No 428
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=44.61 E-value=80 Score=29.10 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=46.6
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- ..-|.|++..|.|.. .+-+.+.+.++...+.-
T Consensus 82 pViaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 82 KLIAHVGCVSTAESQQLAASAKR-YGFDAVSAVTPFYYP------------------------FSFEEHCDHYRAIIDSA 136 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHH-HTCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHHHH
T ss_pred cEEEecCCCCHHHHHHHHHHHHh-CCCCEEEecCCCCCC------------------------CCHHHHHHHHHHHHHhC
Confidence 37777665 555555544432 234899999998842 12233333332211110
Q ss_pred CC-eeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 269 IT-VRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 269 ~~-~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+ ..+++.++|. .||..++.+.+.+|++ --++.=|=|.
T Consensus 137 -~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s 174 (303)
T 2wkj_A 137 -DGLPMVVYNIPA-LSGVKLTLDQINTLVT---LPGVGALXQT 174 (303)
T ss_dssp -TTCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred -CCCCEEEEeCcc-ccCCCCCHHHHHHHhc---CCCEEEEeCC
Confidence 2 4466666666 4788888666555542 2344444444
No 429
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=43.94 E-value=1.3e+02 Score=28.14 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=21.7
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYP 226 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~ 226 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|.
T Consensus 102 pViaGvg~~st~eai~la~~A~~-~Gadavlv~~P~Y~ 138 (343)
T 2v9d_A 102 PVLIGTGGTNARETIELSQHAQQ-AGADGIVVINPYYW 138 (343)
T ss_dssp CEEEECCSSCHHHHHHHHHHHHH-HTCSEEEEECCSSS
T ss_pred cEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCC
Confidence 47777664 555655544432 24489999999884
No 430
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=43.75 E-value=1.1e+02 Score=28.12 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=21.7
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYP 226 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~ 226 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|.
T Consensus 74 pviaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~ 110 (294)
T 3b4u_A 74 RIVTGVLVDSIEDAADQSAEALN-AGARNILLAPPSYF 110 (294)
T ss_dssp GEEEEECCSSHHHHHHHHHHHHH-TTCSEEEECCCCSS
T ss_pred cEEEeCCCccHHHHHHHHHHHHh-cCCCEEEEcCCcCC
Confidence 37766665 556655544432 24489999999884
No 431
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=43.20 E-value=1.4e+02 Score=27.46 Aligned_cols=103 Identities=13% Similarity=0.145 Sum_probs=56.3
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEc-CCC--ChhHHH---HHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCP-IPQ--YPLYSA---SIALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~-~p~--y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
..|++|.|+-..-..++..|. ..|..|.+. ... .+.-.. .+...|++++..++. |.+.+.++++..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASL-DAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-------EQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHH-HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-------CHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHHHHHHH-HCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-------CHHHHHHHHhhC
Confidence 367777664333344555565 345555443 322 222222 233457776665433 688899888753
Q ss_pred HhcCCCeeEEEEecC-CCCCccCCCHHHHHHHHHHHHHcC-CEEEEccCCC
Q 013892 265 KAKGITVRALVVINP-GNPTGQVLAEENQRAIVDFCKKEG-LVLLADEVYQ 313 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~~~~~~-~~li~Deay~ 313 (434)
++..||.+-. .|..| -..|++.|++.| +-.++=..|.
T Consensus 83 -----~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 83 -----EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp -----TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEECSCCS
T ss_pred -----CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEeecccC
Confidence 4556665533 34333 368889999888 5333324444
No 432
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=43.18 E-value=39 Score=31.01 Aligned_cols=74 Identities=12% Similarity=0.270 Sum_probs=45.5
Q ss_pred CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 223 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
|.|..+.++.+.....++.+-... ..-.+.++++++. ..+.+++... | ++.++.+++.+.|+++
T Consensus 51 ~vy~sl~el~~~~~~D~viI~tP~----~~~~~~~~ea~~~------Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~ 114 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVIYVPA----PFCKDSILEAIDA------GIKLIITITE----G--IPTLDMLTVKVKLDEA 114 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEECCCG----GGHHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHHHH
T ss_pred eccCCHHHHhhcCCCCEEEEecCH----HHHHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHc
Confidence 456666666664455555443332 1234555665554 5666555432 3 3567788999999999
Q ss_pred CCEEEEccCC
Q 013892 303 GLVLLADEVY 312 (434)
Q Consensus 303 ~~~li~Deay 312 (434)
|+.++-..+.
T Consensus 115 gv~liGPNc~ 124 (288)
T 2nu8_A 115 GVRMIGPNTP 124 (288)
T ss_dssp TCEEECSSCC
T ss_pred CCEEEecCCc
Confidence 9988766654
No 433
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=43.04 E-value=74 Score=29.82 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+.+.+...+.-+ ..--|+++.|+ .+++.++-.+-- -.-|.|++..|.|.
T Consensus 89 r~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~-~Gadavlv~~P~Y~----------------------- 141 (332)
T 2r8w_A 89 RRRAIEAAATILR---GRRTLMAGIGALRTDEAVALAKDAEA-AGADALLLAPVSYT----------------------- 141 (332)
T ss_dssp HHHHHHHHHHHHT---TSSEEEEEECCSSHHHHHHHHHHHHH-HTCSEEEECCCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
.++-+.+.+.++...+.- +..+++.++|.. ||..++.+.+.+|++
T Consensus 142 -~~s~~~l~~~f~~VA~a~-~lPiilYn~P~~-tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 142 -PLTQEEAYHHFAAVAGAT-ALPLAIYNNPTT-TRFTFSDELLVRLAY 186 (332)
T ss_dssp -CCCHHHHHHHHHHHHHHC-SSCEEEECCHHH-HCCCCCHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCcCCCHHHHHHHHc
No 434
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=42.94 E-value=58 Score=29.67 Aligned_cols=42 Identities=24% Similarity=0.314 Sum_probs=26.6
Q ss_pred hHHHHHHHcCCeEEEEecCCCCCCCC-CHHHHHHHHHHHHhcC
Q 013892 227 LYSASIALHGGTLVPYYLDEATGWGL-ETSEVKKQLEAAKAKG 268 (434)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~~~~~~~~-d~~~l~~~l~~~~~~g 268 (434)
.....++..|+..+.+++..+..|.. .++.+++.++.+.+.|
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~G 78 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNR 78 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 34556777899999998864322322 3566677776665554
No 435
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=42.67 E-value=1.7e+02 Score=25.60 Aligned_cols=98 Identities=15% Similarity=0.083 Sum_probs=48.2
Q ss_pred CEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+ ...-..+.+.|. ..|..|++..-.-. .........+. ...+..|- -|.+.+++.++...+
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~-----~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMH-REGAELAFTYQNDKLKGRVEEFAAQLGS-DIVLQCDV-----AEDASIDTMFAELGK 83 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEECCT-----TCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEcCcHHHHHHHHHHHHhcCC-cEEEEccC-----CCHHHHHHHHHHHHH
Confidence 46666554 233334455555 56777776542221 12222222232 24455542 367888888877655
Q ss_pred cCCCeeEEEEecCCC-CC----cc--C-CCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGN-PT----GQ--V-LAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~N-Pt----G~--~-~~~~~l~~i~~ 297 (434)
+..+...++ +|..- +. +. . .+.++++++.+
T Consensus 84 ~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1qsg_A 84 VWPKFDGFV-HSIGFAPGDQLDGDYVNAVTREGFKIAHD 121 (265)
T ss_dssp TCSSEEEEE-ECCCCCCGGGGSSCHHHHCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCccccCCCccccCCHHHHHHHHH
Confidence 544565544 44422 11 11 1 56667766544
No 436
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=42.59 E-value=1.2e+02 Score=26.70 Aligned_cols=95 Identities=6% Similarity=-0.051 Sum_probs=49.6
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-.. .....+..+..|- -|.+.+++.++...++..+
T Consensus 29 k~vlVTGas~gIG~aia~~l~-~~G~~V~~~~r~~~~------~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 96 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYR-DRNYRVVATSRSIKP------SADPDIHTVAGDI-----SKPETADRIVREGIERFGR 96 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEESSCCC------CSSTTEEEEESCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCChhh------cccCceEEEEccC-----CCHHHHHHHHHHHHHHCCC
Confidence 345666555444445556666 578887765432211 1122455666553 3678888877765444335
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++-+-...+.+ ...+.++++++.+
T Consensus 97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66555442222222 2346677766443
No 437
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=42.49 E-value=65 Score=26.53 Aligned_cols=98 Identities=9% Similarity=0.145 Sum_probs=59.8
Q ss_pred eeEEEEecCCCCCccCCCHHHHHHHHHHHHHc-------CCEEEEccCCCCCccCCCCCccchHHHHhhh--CCCCCCce
Q 013892 271 VRALVVINPGNPTGQVLAEENQRAIVDFCKKE-------GLVLLADEVYQENVYVPEKKFHSFKKVSRSM--GYGEKDIS 341 (434)
Q Consensus 271 ~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~-------~~~li~Deay~~~~~~~~~~~~s~~~~~~~l--~~~~~~~~ 341 (434)
.+++|++...-+ ++.+++.+|++.++++ |+++..+..+... .+|+ ...+..+...+ +..+.++.
T Consensus 7 ~~liY~S~a~~~----~~~~~l~~Il~~a~~~N~~~gITG~Ll~~~g~F~Q~-LEG~--~~~V~~l~~rI~~D~RH~~v~ 79 (153)
T 2hfn_A 7 YRLIYSSQGIPN----LQPQDLKDILESSQRNNPANGITGLLCYSKPAFLQV-LEGE--CEQVNETYHRIVQDERHHSPQ 79 (153)
T ss_dssp EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHHTCEEEEEEETTEEEEE-EEEE--HHHHHHHHHHHHTCTTEEEEE
T ss_pred EEEEEEEeecCC----CCHHHHHHHHHHHHHhhhhcCcEEEEEEeCCEEEEE-eeCC--HHHHHHHHHHHhcCCCcCCeE
Confidence 467777765443 4568999999999876 4566666554442 3333 23333333333 22335666
Q ss_pred EEEEecCCCCCCCCCCceeEEEEEecCC----HHHHHHHHHHh
Q 013892 342 LVSFQSVSKGYYGECGKRGGYMEVTGFS----AEVREQIYKVA 380 (434)
Q Consensus 342 ~i~i~S~SK~~~g~~G~R~G~~~~~~~~----~~~~~~l~~~~ 380 (434)
++.......-.. ++|.+|++-. + +++...+.++.
T Consensus 80 ~l~~~~i~~R~F--~~W~M~~~~~---~~~~~~~~~~~~~~~~ 117 (153)
T 2hfn_A 80 IIECMPIRRRNF--EVWSMQAITV---NDLSTEQVKTLVLKYS 117 (153)
T ss_dssp EEEEEECSSCSS--TTCSCEEEEC---STTSCHHHHHHHHHTS
T ss_pred EEEecccCCCcc--CCCcCeeecc---cccchhHHHHHHHhcc
Confidence 677777666543 6999999966 5 56666666553
No 438
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=42.46 E-value=41 Score=30.63 Aligned_cols=52 Identities=12% Similarity=0.106 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEccCCCC
Q 013892 256 EVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE-GLVLLADEVYQE 314 (434)
Q Consensus 256 ~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~Deay~~ 314 (434)
.+++.++.....+.++.+|. +|...+.+.++.|.++++++ +..+++|-++..
T Consensus 60 ~~~~~~~~~~~~d~~~daik-------~G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~ 112 (282)
T 3h74_A 60 WLPQVFAHWTRAQLHFDQAL-------IGYVGSVALCQQITTYLEQQTLSLLVVDPVLGD 112 (282)
T ss_dssp THHHHHHHHHHTTCCCSEEE-------ECCCCSHHHHHHHHHHHHHSCCSEEEECCCCEE
T ss_pred HHHHHHHHHHHcCCccCEEE-------ECCCCCHHHHHHHHHHHHHCCCCcEEEcCeeec
Confidence 34444443332345778888 88888888899999999886 688999998774
No 439
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=42.07 E-value=1.9e+02 Score=26.71 Aligned_cols=95 Identities=12% Similarity=0.138 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCC---hHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDG---ASPAVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEAT 248 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 248 (434)
|+.+.+...+.-+ ..-.|+++.| ..+++.++-.+-- -.+ |.|++..|.|.
T Consensus 62 r~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~-~Ga~davlv~~P~y~---------------------- 115 (311)
T 3h5d_A 62 ELELFAAVQKVVN---GRVPLIAGVGTNDTRDSIEFVKEVAE-FGGFAAGLAIVPYYN---------------------- 115 (311)
T ss_dssp HHHHHHHHHHHSC---SSSCEEEECCCSSHHHHHHHHHHHHH-SCCCSEEEEECCCSS----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHh-cCCCcEEEEcCCCCC----------------------
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
.++-+.+.+..+...+.- +..+++.++|.. ||..++.+.+.+|++
T Consensus 116 --~~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 116 --KPSQEGMYQHFKAIADAS-DLPIIIYNIPGR-VVVELTPETMLRLAD 160 (311)
T ss_dssp --CCCHHHHHHHHHHHHHSC-SSCEEEEECHHH-HSSCCCHHHHHHHHT
T ss_pred --CCCHHHHHHHHHHHHHhC-CCCEEEEecccc-cCCCCCHHHHHHHhc
No 440
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=41.65 E-value=16 Score=35.09 Aligned_cols=76 Identities=20% Similarity=0.390 Sum_probs=45.9
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLL 307 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li 307 (434)
+.+.+..++.++..+.+.++.+|.+..+.+-+...... .+ ....+ .+ ..+.|..++++++++|++.|+++|+-||
T Consensus 38 ~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~-~~--~~g~~-~~-~~~~~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 38 FIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAV-QG--KDGIY-IN-PYTGKPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp HHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSE-EC--TTSCE-EC-TTTCCEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhc-cc--cCCCc-CC-CCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 44556667888888888877788876543211000000 00 00001 11 1223457999999999999999999887
Q ss_pred E
Q 013892 308 A 308 (434)
Q Consensus 308 ~ 308 (434)
-
T Consensus 113 P 113 (367)
T 1yht_A 113 P 113 (367)
T ss_dssp E
T ss_pred E
Confidence 4
No 441
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=41.52 E-value=1.4e+02 Score=27.40 Aligned_cols=49 Identities=12% Similarity=0.159 Sum_probs=28.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
.+|.+.+++.++...+.| +..|+++ .++=-+..++.+|.+++++.+.+.
T Consensus 32 ~iD~~~l~~lv~~li~~G--v~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~ 80 (304)
T 3l21_A 32 SLDTATAARLANHLVDQG--CDGLVVS-GTTGESPTTTDGEKIELLRAVLEA 80 (304)
T ss_dssp CBCHHHHHHHHHHHHHTT--CSEEEES-STTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcC--CCEEEeC-ccccchhhCCHHHHHHHHHHHHHH
Confidence 677777777776655554 3344433 222234456777777777766653
No 442
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=41.33 E-value=17 Score=35.65 Aligned_cols=27 Identities=26% Similarity=0.500 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
++++++++++-|+++|+-||+|-|+--
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 678999999999999999999999865
No 443
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=41.29 E-value=1.2e+02 Score=25.83 Aligned_cols=108 Identities=10% Similarity=0.020 Sum_probs=51.6
Q ss_pred CCCCCCEEEcCChHHHHHHHHHHHhcCCC--CEEEEcCCCChhHHHHHHH----cCCeEEEEecCCCCCCCCCHHHHHHH
Q 013892 187 PADPNDIFLTDGASPAVHMMMQLLIRSEN--DGILCPIPQYPLYSASIAL----HGGTLVPYYLDEATGWGLETSEVKKQ 260 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~al~~~l~~l~~~~g--d~Vlv~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~ 260 (434)
.+++++|++..-+..+...+..++. .|. ..|+......+........ ....++.+-.-.+ +-.+.++..++.
T Consensus 96 ~i~~~ri~l~G~S~Gg~~a~~~a~~-~p~~~~~vv~~sg~l~~~~~~~~~~~~~~~~~Pvl~~hG~~-D~~vp~~~~~~~ 173 (210)
T 4h0c_A 96 GIPAEQIYFAGFSQGACLTLEYTTR-NARKYGGIIAFTGGLIGQELAIGNYKGDFKQTPVFISTGNP-DPHVPVSRVQES 173 (210)
T ss_dssp TCCGGGEEEEEETHHHHHHHHHHHH-TBSCCSEEEEETCCCCSSSCCGGGCCBCCTTCEEEEEEEES-CTTSCHHHHHHH
T ss_pred CCChhhEEEEEcCCCcchHHHHHHh-CcccCCEEEEecCCCCChhhhhhhhhhhccCCceEEEecCC-CCccCHHHHHHH
Confidence 4678899887666665554444443 332 3454433322111000000 1112233322222 124566666665
Q ss_pred HHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 261 LEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 261 l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
.+..++.|.++....+.. .|..++.++++.|.+|..
T Consensus 174 ~~~L~~~g~~v~~~~ypg----~gH~i~~~el~~i~~wL~ 209 (210)
T 4h0c_A 174 VTILEDMNAAVSQVVYPG----RPHTISGDEIQLVNNTIL 209 (210)
T ss_dssp HHHHHHTTCEEEEEEEET----CCSSCCHHHHHHHHHTTT
T ss_pred HHHHHHCCCCeEEEEECC----CCCCcCHHHHHHHHHHHc
Confidence 555555554554444432 244567888888877653
No 444
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=41.00 E-value=1.2e+02 Score=27.22 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=50.3
Q ss_pred CCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 190 PNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 190 ~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
-..+++|.|++..-..+.+.|. ..|-+|++..-.-. ....+...+..| --|.+.+++.++...++-.
T Consensus 11 GK~alVTGas~GIG~aia~~la-~~Ga~V~~~~r~~~-------~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 11 GKRALITAGTKGAGAATVSLFL-ELGAQVLTTARARP-------EGLPEELFVEAD-----LTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp TCEEEESCCSSHHHHHHHHHHH-HTTCEEEEEESSCC-------TTSCTTTEEECC-----TTSHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeccCcHHHHHHHHHHH-HcCCEEEEEECCch-------hCCCcEEEEEcC-----CCCHHHHHHHHHHHHHHcC
Confidence 3345555555444444555666 57888877543211 011122234444 2367788887777655544
Q ss_pred CeeEEEEecCC--CCC-c--cCCCHHHHHHHHHH
Q 013892 270 TVRALVVINPG--NPT-G--QVLAEENQRAIVDF 298 (434)
Q Consensus 270 ~~~~i~l~~p~--NPt-G--~~~~~~~l~~i~~~ 298 (434)
+...++ +|.. .+. | ..++.++|+++.++
T Consensus 78 ~iDilV-nnAG~~~~~~~~~~~~~~e~~~~~~~v 110 (261)
T 4h15_A 78 GVDVIV-HMLGGSSAAGGGFSALSDDDWYNELSL 110 (261)
T ss_dssp SCSEEE-ECCCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CCCEEE-ECCCCCccCCCCcccCCHHHHHHHHHH
Confidence 565444 4442 222 2 34677888877654
No 445
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=40.94 E-value=2.8e+02 Score=28.16 Aligned_cols=96 Identities=13% Similarity=0.120 Sum_probs=49.1
Q ss_pred CEEEcCChHHHHH-HHHHHHhcCCCCEEEEcCC-CChhHHHHHHHcCCeEEEEecCCCCCCCCCH-HHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAVH-MMMQLLIRSENDGILCPIP-QYPLYSASIALHGGTLVPYYLDEATGWGLET-SEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al~-~~l~~l~~~~gd~Vlv~~p-~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~-~~l~~~l~~~~~~g 268 (434)
.+++.+|++.+|- .+.+.|. ..|-+|++.+- .-......++..|.+++.+.+ |+ ++.++.++...++.
T Consensus 323 kvalVTGas~GIG~a~A~~la-~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~--------Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFA-KYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH--------DVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEECSSCCHHHHHHHHHTTCEEEEECC--------CHHHHHHHHHHHHHHHH
T ss_pred CeEEEECcchHHHHHHHHHHH-HCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEc--------ChHHHHHHHHHHHHHhc
Confidence 3444445555554 4445555 57888887652 222233344455777665543 45 44444444433322
Q ss_pred CCeeEEEEecCC-CCCc--cCCCHHHHHHHHH
Q 013892 269 ITVRALVVINPG-NPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 269 ~~~~~i~l~~p~-NPtG--~~~~~~~l~~i~~ 297 (434)
.+... +++|.. ...+ .-++.++|+++.+
T Consensus 394 G~iDi-LVnNAGi~~~~~~~~~~~~~~~~~~~ 424 (604)
T 2et6_A 394 GTIDI-LVNNAGILRDRSFAKMSKQEWDSVQQ 424 (604)
T ss_dssp SCCCE-EEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 24554 445543 2222 2467788877654
No 446
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=40.88 E-value=2.6e+02 Score=28.65 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=62.0
Q ss_pred CCCCCCEEEcCChHH----HHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHH
Q 013892 187 PADPNDIFLTDGASP----AVHMMMQLLIRSEN-DGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQL 261 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~----al~~~l~~l~~~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 261 (434)
.++++.|.++.+... |+..+.+.+. ..+ ...+...|.|+ .+.+-+|...+--+.++.+++.|
T Consensus 42 ~i~~~~i~I~a~~~~G~~~glqTL~QL~~-~~~~~~~I~D~P~f~------------~RG~mlD~sR~~f~~~~~ik~~i 108 (627)
T 2epl_X 42 EGRQGYYQVSYKQPHQLYRALALLSAALR-SGQDEVQIEEEAAYE------------DLAYMADCSRNAVLNLSSAKKMI 108 (627)
T ss_dssp EEETTEEEEEESSTTHHHHHHHHHHHHHH-TTCSSEEEEECCSCS------------EEEEEEECSSSCCBCHHHHHHHH
T ss_pred EEeCCEEEEEECCHHHHHHHHHHHHHHhh-cCCCceEEEeCCCCC------------ccceEEecCCCCCCCHHHHHHHH
Confidence 355667777654444 4444444443 222 34555556653 23333333322125678887777
Q ss_pred HHHHhcCCCeeEEEEec----CCCC----CccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 262 EAAKAKGITVRALVVIN----PGNP----TGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 262 ~~~~~~g~~~~~i~l~~----p~NP----tG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+....-+.+.=-+.++. +..| .|..++.+++++|++.|+++|+-||-
T Consensus 109 d~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 109 EVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 76443333332233322 1223 46789999999999999999998874
No 447
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=40.83 E-value=1.5e+02 Score=27.47 Aligned_cols=95 Identities=13% Similarity=0.113 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+++.+...+.-+ ..--|+++.|+ .+++.++-.+-- -.-|.|++..|.|.
T Consensus 78 r~~v~~~~v~~~~---grvpViaGvg~~st~eai~la~~A~~-~Gadavlv~~P~y~----------------------- 130 (314)
T 3qze_A 78 HIQVIRRVVDQVK---GRIPVIAGTGANSTREAVALTEAAKS-GGADACLLVTPYYN----------------------- 130 (314)
T ss_dssp HHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHH-cCCCEEEEcCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
.++-+.+.+.++...+.- +..+++.++|.. ||..++.+.+.+|++
T Consensus 131 -~~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 131 -KPTQEGMYQHFRHIAEAV-AIPQILYNVPGR-TSCDMLPETVERLSK 175 (314)
T ss_dssp -CCCHHHHHHHHHHHHHHS-CSCEEEEECHHH-HSCCCCHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCCCCCHHHHHHHhc
No 448
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=40.68 E-value=1.9e+02 Score=25.72 Aligned_cols=99 Identities=11% Similarity=0.013 Sum_probs=48.0
Q ss_pred CEEEcCChH-HHH-HHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGAS-PAV-HMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~-~al-~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|++ .+| ..+.+.|. ..|..|++..-.-. .........|. +..+.+|- -|.+.+++.++...+
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~Dl-----~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFH-REGAQLAFTYATPKLEKRVREIAKGFGS-DLVVKCDV-----SLDEDIKNLKKFLEE 95 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHTTC-CCEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 466665541 333 34445555 46777776543222 12222222332 44455543 267788887776544
Q ss_pred cCCCeeEEEEecCCCCC----c--cCCCHHHHHHHHH
Q 013892 267 KGITVRALVVINPGNPT----G--QVLAEENQRAIVD 297 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPt----G--~~~~~~~l~~i~~ 297 (434)
+..+...+|-+-...+. + ...+.+++++..+
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 132 (285)
T 2p91_A 96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMD 132 (285)
T ss_dssp HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence 43356655443221111 1 1356677765543
No 449
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=40.63 E-value=20 Score=35.24 Aligned_cols=70 Identities=16% Similarity=0.290 Sum_probs=44.9
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHH--------------HHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHH
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEV--------------KKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQR 293 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l--------------~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~ 293 (434)
+.+.+..++..+..+.+.++ +|.+.++.+ ...+..- .. ...++|.|..+++++++
T Consensus 30 ~ID~mA~~KlN~lH~HltDd-gwriei~~~pl~~~g~~~~~~~~~~~~~~g------~~----~~~~~~~~~~YT~~di~ 98 (442)
T 2yl5_A 30 IVDKASELGYSDVHLLLGND-GLRFLLDDMTITANGKTYASDDVKKAIIEG------TK----AYYDDPNGTALTQAEVT 98 (442)
T ss_dssp HHHHHHHHTCCEEEEEEESS-SBCBCCSCCCEEETTEEECHHHHHHHHHHH------HH----HHCCCTTCSCBCHHHHH
T ss_pred HHHHHHHhCCcEEEEEEcCC-CcceeccCCcceeceeecccccccccccCC------cc----ccccCCCCCCcCHHHHH
Confidence 34455567788877777655 677654322 1111110 00 01235678899999999
Q ss_pred HHHHHHHHcCCEEEE
Q 013892 294 AIVDFCKKEGLVLLA 308 (434)
Q Consensus 294 ~i~~~~~~~~~~li~ 308 (434)
+|++.|+++|+-||-
T Consensus 99 eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 99 ELIEYAKSKDIGLIP 113 (442)
T ss_dssp HHHHHHHTTTCEEEE
T ss_pred HHHHHHHHcCCeeee
Confidence 999999999998884
No 450
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=40.54 E-value=1.8e+02 Score=26.57 Aligned_cols=89 Identities=18% Similarity=0.249 Sum_probs=46.9
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|.. ++-+.+.+.++...+.-
T Consensus 79 pviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~------------------------~s~~~l~~~f~~va~a~ 133 (301)
T 3m5v_A 79 KVLAGAGSNATHEAVGLAKFAKE-HGADGILSVAPYYNK------------------------PTQQGLYEHYKAIAQSV 133 (301)
T ss_dssp EEEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSSC------------------------CCHHHHHHHHHHHHHHC
T ss_pred eEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEcCCCCCC------------------------CCHHHHHHHHHHHHHhC
Confidence 46666654 445554443332 244899999998752 12233433333321111
Q ss_pred CCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcc
Q 013892 269 ITVRALVVINPGNPTGQVLAEENQRAIVDFCKK-EGLVLLADE 310 (434)
Q Consensus 269 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~-~~~~li~De 310 (434)
+...++.++|.. ||..++.+.+.+|+ +. -++.=|=|.
T Consensus 134 -~lPiilYn~P~~-tg~~l~~~~~~~La---~~~pnivgiKds 171 (301)
T 3m5v_A 134 -DIPVLLYNVPGR-TGCEISTDTIIKLF---RDCENIYGVKEA 171 (301)
T ss_dssp -SSCEEEEECHHH-HSCCCCHHHHHHHH---HHCTTEEEEEEC
T ss_pred -CCCEEEEeCchh-hCcCCCHHHHHHHH---hcCCCEEEEEeC
Confidence 344566666654 78888866655554 33 345555554
No 451
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=40.47 E-value=2.1e+02 Score=25.97 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
..|++.+.+.++...+.| +..|.+.+ ..|. .++++..++++..++
T Consensus 151 ~~~~~~~~~~~~~~~~~G--~d~i~l~D---t~G~-~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLG--CHEVSLGD---TIGR-GTPDTVAAMLDAVLA 195 (295)
T ss_dssp ECCHHHHHHHHHHHHHHT--CSEEEEEE---TTSC-CCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcC--CCEEEecC---CCCC-cCHHHHHHHHHHHHH
Confidence 456777777666444443 34455553 3555 455555666555554
No 452
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=40.22 E-value=45 Score=30.73 Aligned_cols=75 Identities=17% Similarity=0.340 Sum_probs=44.9
Q ss_pred CCChhHHHHHHHcC-CeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 223 PQYPLYSASIALHG-GTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 223 p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
|+|....++.+..+ ..+.-+-... ..-.+.++++++. .++.+++.. +| ++.++.++|.+.|++
T Consensus 57 ~vy~sl~el~~~~~~~DvaIi~vp~----~~~~~~v~ea~~~------Gi~~vVi~t----~G--~~~~~~~~l~~~A~~ 120 (297)
T 2yv2_A 57 PVYDSVKEALAEHPEINTSIVFVPA----PFAPDAVYEAVDA------GIRLVVVIT----EG--IPVHDTMRFVNYARQ 120 (297)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCG----GGHHHHHHHHHHT------TCSEEEECC----CC--CCHHHHHHHHHHHHH
T ss_pred eeeCCHHHHhhcCCCCCEEEEecCH----HHHHHHHHHHHHC------CCCEEEEEC----CC--CCHHHHHHHHHHHHH
Confidence 45556666655323 4444433322 1234555555554 577666543 34 356788999999999
Q ss_pred cCCEEEEccCCC
Q 013892 302 EGLVLLADEVYQ 313 (434)
Q Consensus 302 ~~~~li~Deay~ 313 (434)
+++.++-..+..
T Consensus 121 ~gi~viGPNc~G 132 (297)
T 2yv2_A 121 KGATIIGPNCPG 132 (297)
T ss_dssp HTCEEECSSSCE
T ss_pred cCCEEEcCCCCe
Confidence 999888777544
No 453
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=39.55 E-value=1.6e+02 Score=25.58 Aligned_cols=94 Identities=11% Similarity=0.065 Sum_probs=47.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-. .+..| +..+..|- -|.+.+++.++...++..+
T Consensus 8 k~vlVTGas~giG~~ia~~l~-~~G~~V~~~~r~~~-----~~~~~--~~~~~~D~-----~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFV-EAGAKVTGFDQAFT-----QEQYP--FATEVMDV-----ADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCCC-----SSCCS--SEEEECCT-----TCHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCchh-----hhcCC--ceEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 345666555444445555666 57777776432211 01123 33344442 2678888887765444335
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...++-+-...+.+ ..++.++++++.+
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 75 LDALVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp CCEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 65555442222222 2346677766544
No 454
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=39.47 E-value=1.3e+02 Score=26.80 Aligned_cols=94 Identities=17% Similarity=0.097 Sum_probs=46.1
Q ss_pred CCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 013892 191 NDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGIT 270 (434)
Q Consensus 191 ~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~ 270 (434)
..+++|.|+...-..+.+.|. ..|..|++..-.-... .+ ....+.+|- -|.+.+++.++...++..+
T Consensus 15 k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~~------~~-~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 81 (269)
T 3vtz_A 15 KVAIVTGGSSGIGLAVVDALV-RYGAKVVSVSLDEKSD------VN-VSDHFKIDV-----TNEEEVKEAVEKTTKKYGR 81 (269)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEESCC--C------TT-SSEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEeCCchhc------cC-ceeEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 345555555444444555666 5787777654221110 11 233444442 3677787777765444335
Q ss_pred eeEEEEecCCCCCc--cCCCHHHHHHHHH
Q 013892 271 VRALVVINPGNPTG--QVLAEENQRAIVD 297 (434)
Q Consensus 271 ~~~i~l~~p~NPtG--~~~~~~~l~~i~~ 297 (434)
...+|-+-...+.+ ...+.++|+++.+
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 82 IDILVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp CCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 55554432222212 2346666665443
No 455
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=39.28 E-value=63 Score=26.45 Aligned_cols=60 Identities=20% Similarity=0.209 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCH-HHHHHHHH-HHHHcCC-EEEEccCCCC
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAE-ENQRAIVD-FCKKEGL-VLLADEVYQE 314 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~-~~l~~i~~-~~~~~~~-~li~Deay~~ 314 (434)
+..+.+.|.+.++++ ++..|++-.|-|.-|..-.. .+.+.+++ ++++.++ +.++||.|..
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 355789999999876 78899999997766665322 12355553 3344565 5668998764
No 456
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=39.21 E-value=1.4e+02 Score=24.62 Aligned_cols=107 Identities=11% Similarity=0.044 Sum_probs=50.4
Q ss_pred CCCCCEEEcCChHHHHHHHHHHHhcCC--CCEEEEcCCCChhHHHH-HHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHH
Q 013892 188 ADPNDIFLTDGASPAVHMMMQLLIRSE--NDGILCPIPQYPLYSAS-IALHGGTLVPYYLDEATGWGLETSEVKKQLEAA 264 (434)
Q Consensus 188 ~~~~~i~~t~G~~~al~~~l~~l~~~~--gd~Vlv~~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 264 (434)
++++.+++..-+..+...+..+.. .+ -+.++...|.++..... .......+..+--.. +..+..+..++..+..
T Consensus 99 ~d~~~~~l~G~S~Gg~~a~~~a~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~~--D~~v~~~~~~~~~~~l 175 (209)
T 3og9_A 99 LDVHKMIAIGYSNGANVALNMFLR-GKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPN--DMIVPQKNFGDLKGDL 175 (209)
T ss_dssp CCGGGCEEEEETHHHHHHHHHHHT-TSCCCSEEEEESCCCCCCCCCCCCCTTCEEEEEECTT--CSSSCHHHHHHHHHHH
T ss_pred CCcceEEEEEECHHHHHHHHHHHh-CCcccceEEEECCCCCCcccccccccCCCEEEEcCCC--CCccCHHHHHHHHHHH
Confidence 456677766555555444433333 23 25666666544321110 011122222222222 2244444444433333
Q ss_pred HhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 265 KAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 265 ~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
++.+ ...-+...| .|..++.++++++.++.+++
T Consensus 176 ~~~~--~~~~~~~~~---~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 176 EDSG--CQLEIYESS---LGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp HHTT--CEEEEEECS---STTSCCHHHHHHHHHHHHHH
T ss_pred HHcC--CceEEEEcC---CCCcCCHHHHHHHHHHHHhh
Confidence 3333 223333332 57777888888888888764
No 457
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=39.04 E-value=1.8e+02 Score=26.80 Aligned_cols=95 Identities=14% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCC---hHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDG---ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+.+.+...+.-+ ..--|+++.| ..+++.++-.+-- -.-|.|++..|.|.
T Consensus 77 r~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~~-~Gadavlv~~P~y~----------------------- 129 (315)
T 3si9_A 77 HKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAEK-AGADAVLVVTPYYN----------------------- 129 (315)
T ss_dssp HHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
.++-+.+.+.++...+.- +...++.++|.. ||..++.+.+.+|++
T Consensus 130 -~~~~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 130 -RPNQRGLYTHFSSIAKAI-SIPIIIYNIPSR-SVIDMAVETMRDLCR 174 (315)
T ss_dssp -CCCHHHHHHHHHHHHHHC-SSCEEEEECHHH-HSCCCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHcC-CCCEEEEeCchh-hCCCCCHHHHHHHHh
No 458
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=38.97 E-value=60 Score=30.45 Aligned_cols=19 Identities=11% Similarity=-0.053 Sum_probs=14.3
Q ss_pred hHHHHHHHcCCeEEEEecC
Q 013892 227 LYSASIALHGGTLVPYYLD 245 (434)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~ 245 (434)
.....++..|+..+.+|+.
T Consensus 46 ~di~~i~~~G~n~vRipi~ 64 (345)
T 3ndz_A 46 AMINKIKEAGFNTLRLPVT 64 (345)
T ss_dssp HHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHCCCCEEEEeee
Confidence 3455667889999998875
No 459
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=38.80 E-value=2.5e+02 Score=27.00 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=51.9
Q ss_pred CCCCEEEcCChHHHHHHHHH-HH-hcCCCCEEEEcCC-----------CCh---hHHHHHHHcCCeEEEEecCCCCCCCC
Q 013892 189 DPNDIFLTDGASPAVHMMMQ-LL-IRSENDGILCPIP-----------QYP---LYSASIALHGGTLVPYYLDEATGWGL 252 (434)
Q Consensus 189 ~~~~i~~t~G~~~al~~~l~-~l-~~~~gd~Vlv~~p-----------~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~ 252 (434)
.|..+++|.|+ .++.++.. ++ ....++.|++.-. .|. .+...++..|.+.+.+++|- .
T Consensus 49 ~pK~vLVtGaS-sGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv-----~ 122 (401)
T 4ggo_A 49 APKNVLVLGCS-NGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDA-----F 122 (401)
T ss_dssp CCCEEEEESCS-SHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCT-----T
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCC-----C
Confidence 45667776554 44444322 22 1134556665431 121 23456777899999999884 4
Q ss_pred CHHHHHHHHHHHHhcCCCeeEEEEe
Q 013892 253 ETSEVKKQLEAAKAKGITVRALVVI 277 (434)
Q Consensus 253 d~~~l~~~l~~~~~~g~~~~~i~l~ 277 (434)
|.+.+++.++..+++..+...+|-+
T Consensus 123 d~e~i~~vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 123 SDEIKAQVIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 7889999998888777678766655
No 460
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=38.70 E-value=71 Score=29.88 Aligned_cols=38 Identities=24% Similarity=0.176 Sum_probs=33.1
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
-.||.|...+.+.+.++++.|+++|+-|++|--|++..
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 47888888899999999999999999999998776653
No 461
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=38.15 E-value=1.4e+02 Score=25.83 Aligned_cols=32 Identities=9% Similarity=0.152 Sum_probs=18.7
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCC
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQ 224 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~ 224 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.
T Consensus 4 ~vlVTGas~giG~~~a~~l~-~~G~~V~~~~r~ 35 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALV-ARGYRVAIASRN 35 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred EEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 35666555444445555666 578787775544
No 462
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=37.68 E-value=35 Score=31.47 Aligned_cols=75 Identities=11% Similarity=0.188 Sum_probs=43.9
Q ss_pred CCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc
Q 013892 223 PQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE 302 (434)
Q Consensus 223 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~ 302 (434)
|.|....++.+.....+.-+-.. .+...+.+++..+. ..+.+++.. +|. +.++.++|.+.|+++
T Consensus 57 ~vy~sl~el~~~~~~Dv~ii~vp--------~~~~~~~v~ea~~~--Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~ 120 (294)
T 2yv1_A 57 PVFDTVKEAVKETDANASVIFVP--------APFAKDAVFEAIDA--GIELIVVIT----EHI--PVHDTMEFVNYAEDV 120 (294)
T ss_dssp EEESSHHHHHHHHCCCEEEECCC--------HHHHHHHHHHHHHT--TCSEEEECC----SCC--CHHHHHHHHHHHHHH
T ss_pred eeeCCHHHHhhcCCCCEEEEccC--------HHHHHHHHHHHHHC--CCCEEEEEC----CCC--CHHHHHHHHHHHHHc
Confidence 44666666665334444443322 23333333333333 466555543 343 567789999999999
Q ss_pred CCEEEEccCCC
Q 013892 303 GLVLLADEVYQ 313 (434)
Q Consensus 303 ~~~li~Deay~ 313 (434)
++.++-..+..
T Consensus 121 gi~viGPNc~G 131 (294)
T 2yv1_A 121 GVKIIGPNTPG 131 (294)
T ss_dssp TCEEECSSCCE
T ss_pred CCEEEcCCCce
Confidence 99888777553
No 463
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=37.45 E-value=20 Score=35.15 Aligned_cols=28 Identities=25% Similarity=0.655 Sum_probs=24.9
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 281 NPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 281 NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
+|.|..++++++++|++.|+++|+-||-
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 4567899999999999999999998884
No 464
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=37.34 E-value=1.2e+02 Score=27.78 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+.+.+...+.-+ ..--|+++.|+ .+++.++-.+-- -.-|.|++..|.|.
T Consensus 59 r~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~----------------------- 111 (293)
T 1f6k_A 59 KKEIFRIAKDEAK---DQIALIAQVGSVNLKEAVELGKYATE-LGYDCLSAVTPFYY----------------------- 111 (293)
T ss_dssp HHHHHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHHH-HTCSEEEEECCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCeEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
..+-+.+.+..+...+.- +...++.++|. .||..++.+.+.+|++
T Consensus 112 -~~~~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 112 -KFSFPEIKHYYDTIIAET-GSNMIVYSIPF-LTGVNMGIEQFGELYK 156 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHH-CCCEEEEECHH-HHCCCCCHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHhC-CCCEEEEECcc-ccCcCCCHHHHHHHhc
No 465
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=37.32 E-value=1.9e+02 Score=26.44 Aligned_cols=48 Identities=8% Similarity=0.154 Sum_probs=24.5
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
.+|.+.+++.++...+.| +..|+++ .++=-+..++.+|.+++++.+.+
T Consensus 33 ~iD~~~l~~lv~~li~~G--v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~ 80 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKG--LDSLVLA-GTTGESPTTTAAEKLELLKAVRE 80 (304)
T ss_dssp CBCHHHHHHHHHHHHHTT--CCEEEES-STTTTTTTSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcC--CCEEEEC-ccccChhhCCHHHHHHHHHHHHH
Confidence 566666666666554443 3344433 12222334666666666666554
No 466
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=37.05 E-value=1.8e+02 Score=25.89 Aligned_cols=80 Identities=13% Similarity=0.000 Sum_probs=40.6
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH---c-CCeEEEEecCCCCCCCCCH-HHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIAL---H-GGTLVPYYLDEATGWGLET-SEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~---~-g~~~~~~~~~~~~~~~~d~-~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+.+.|. ..|-.|++..-.-......++. . +.++..+.+|-. |. +.+++.++...+
T Consensus 14 ~vlITGas~GIG~~~a~~L~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 14 CAVVTGGNKGIGFEICKQLS-SNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT-----DPIATMSSLADFIKT 87 (311)
T ss_dssp EEEESSCSSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTT-----SCHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCC-----CcHHHHHHHHHHHHH
Confidence 35555544443344555566 5788888776544433333332 2 345677766643 44 555555554333
Q ss_pred cCCCeeEEEEe
Q 013892 267 KGITVRALVVI 277 (434)
Q Consensus 267 ~g~~~~~i~l~ 277 (434)
+..+...+|.+
T Consensus 88 ~~g~iD~lv~n 98 (311)
T 3o26_A 88 HFGKLDILVNN 98 (311)
T ss_dssp HHSSCCEEEEC
T ss_pred hCCCCCEEEEC
Confidence 32245554433
No 467
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=37.03 E-value=63 Score=32.26 Aligned_cols=20 Identities=10% Similarity=-0.069 Sum_probs=15.2
Q ss_pred hhHHHHHHHcCCeEEEEecC
Q 013892 226 PLYSASIALHGGTLVPYYLD 245 (434)
Q Consensus 226 ~~~~~~~~~~g~~~~~~~~~ 245 (434)
......++..|+..+.+++.
T Consensus 48 ~~di~~i~~~G~N~vRipi~ 67 (515)
T 3icg_A 48 HAMINKIKEAGFNTLRLPVT 67 (515)
T ss_dssp HHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHCCCCEEEEccc
Confidence 34566677889999998875
No 468
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=36.87 E-value=2.1e+02 Score=26.35 Aligned_cols=95 Identities=15% Similarity=0.080 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCC---hHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDG---ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+.+.+...+.-+ ..--|+++.| ..+++.++-.+-- -.-|.|++..|.|.
T Consensus 79 r~~v~~~~v~~~~---grvpViaGvg~~~t~~ai~la~~A~~-~Gadavlv~~P~y~----------------------- 131 (315)
T 3na8_A 79 WDEVVDFTLKTVA---HRVPTIVSVSDLTTAKTVRRAQFAES-LGAEAVMVLPISYW----------------------- 131 (315)
T ss_dssp HHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHH-TTCSEEEECCCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHH-HH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAI-VD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i-~~ 297 (434)
.++-+.+.+.++...+.- +..+++.++|.. ||..++.+.+.+| .+
T Consensus 132 -~~s~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~L~a~ 177 (315)
T 3na8_A 132 -KLNEAEVFQHYRAVGEAI-GVPVMLYNNPGT-SGIDMSVELILRIVRE 177 (315)
T ss_dssp -CCCHHHHHHHHHHHHHHC-SSCEEEEECHHH-HSCCCCHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHhC-CCcEEEEeCcch-hCcCCCHHHHHHHHhc
No 469
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=36.85 E-value=1.5e+02 Score=25.34 Aligned_cols=60 Identities=10% Similarity=0.038 Sum_probs=42.1
Q ss_pred HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 228 YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
....++..|.+++.+.. ....+++.+++++. ++.+|.++.-..+ +...++++++.+++.+
T Consensus 108 va~~l~~~G~~v~~LG~------~vp~~~l~~~~~~~-----~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGV------DIEPGKFVEAVKKY-----QPDIVGMSALLTT-----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHHHHHTTCEEEECCS------SBCHHHHHHHHHHH-----CCSEEEEECCSGG-----GTHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEeccccc-----cHHHHHHHHHHHHhcC
Confidence 34456778999887643 45688888888775 7888887743221 3467889998888764
No 470
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=36.84 E-value=2.5e+02 Score=25.73 Aligned_cols=145 Identities=17% Similarity=0.242 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHcCCC--CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCC------hH----HHHHHHHHH
Q 013892 142 ADSIERAWQILDQIPG--RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDG------AS----PAVHMMMQL 209 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G------~~----~al~~~l~~ 209 (434)
.++.+.+..+++..-. +....|+. .+.+.+++.+. +...+++++++= +. .++...++.
T Consensus 65 ~~~~~~l~~Al~~Gi~~~DTA~~Yg~-------E~~lG~al~~~---~~~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~r 134 (310)
T 3b3e_A 65 NEATESVKAAIKNGYRSIDTAAIYKN-------EEGVGIGIKES---GVAREELFITSKVWNEDQGYETTLAAFEKSLER 134 (310)
T ss_dssp HHHHHHHHHHHHTTCCEEECCGGGSC-------HHHHHHHHHHS---SSCGGGCEEEEEECGGGCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECCCccCC-------HHHHHHHHHhc---CCCcceEEEEEeCCCCCCCHHHHHHHHHHHHHH
Confidence 4566666777765321 11234542 34556666542 234566766541 12 233333333
Q ss_pred HhcCCCCEEEEcCCCChhHHH---HHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 210 LIRSENDGILCPIPQYPLYSA---SIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 210 l~~~~gd~Vlv~~p~y~~~~~---~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
|-.+.=|-+++-.|....+.. .++.+ .+++..+=+. ..+.+.+++.++.. ..+.++....-||.-
T Consensus 135 Lg~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvS-----n~~~~~l~~~~~~~-----~~~p~~~Q~~~~~~~ 204 (310)
T 3b3e_A 135 LQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS-----NFQVHHLEELLKDA-----EIKPMVNQVEFHPRL 204 (310)
T ss_dssp HTCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEEEE-----SCCHHHHHHHHHHC-----SSCCSEEEEECBTTB
T ss_pred hCCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEeec-----CCCHHHHHHHHHhc-----CCCcceeeeeccCcc
Confidence 321222666777665432222 22221 3445555443 34677777776552 222222222233321
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccCC
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEVY 312 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Deay 312 (434)
. -.+++++|+++|+.++.=...
T Consensus 205 ---~---~~~l~~~~~~~gi~v~a~spL 226 (310)
T 3b3e_A 205 ---T---QKELRDYCKGQGIQLEAWSPL 226 (310)
T ss_dssp ---C---CHHHHHHHHHHTCEEEEESTT
T ss_pred ---C---CHHHHHHHHHcCCEEEEeccc
Confidence 1 146788888888888764433
No 471
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=36.57 E-value=72 Score=29.28 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=28.4
Q ss_pred hHHHHHHHcCCeEEEEecC------CCCCCCCC---HHHHHHHHHHHHhcC
Q 013892 227 LYSASIALHGGTLVPYYLD------EATGWGLE---TSEVKKQLEAAKAKG 268 (434)
Q Consensus 227 ~~~~~~~~~g~~~~~~~~~------~~~~~~~d---~~~l~~~l~~~~~~g 268 (434)
.....++..|+..+.+++. +...+.+| ++.+.+.++.+.+.|
T Consensus 45 ~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G 95 (320)
T 3nco_A 45 EYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND 95 (320)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC
Confidence 4566678889999998852 22345667 566677777776665
No 472
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=36.48 E-value=2.2e+02 Score=25.06 Aligned_cols=99 Identities=10% Similarity=0.020 Sum_probs=49.8
Q ss_pred CCEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+ ...-..+.+.|. ..|..|++..-.-. .........| .+..+.+|- -|.+.+++.++...
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~-----~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDV-----SKEEHFKSLYNSVK 79 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCC-----CCHHHHHHHHHHHH
Confidence 346666654 333344555565 57877776543222 1222222233 244455543 26778888777655
Q ss_pred hcCCCeeEEEEecCCC-CC----c--cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGN-PT----G--QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~N-Pt----G--~~~~~~~l~~i~~ 297 (434)
++..+...+| +|..- +. + ...+.+++++..+
T Consensus 80 ~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 117 (275)
T 2pd4_A 80 KDLGSLDFIV-HSVAFAPKEALEGSLLETSKSAFNTAME 117 (275)
T ss_dssp HHTSCEEEEE-ECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCccCccccCCCCcccCCHHHHHHHHH
Confidence 4433565544 44421 11 1 1456677766543
No 473
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=36.18 E-value=68 Score=28.33 Aligned_cols=77 Identities=18% Similarity=0.243 Sum_probs=54.3
Q ss_pred HHHHHHHcCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 013892 228 YSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (434)
Q Consensus 228 ~~~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 306 (434)
-..+++..|+. +.++|+.-. -.+|++...-+...++|. ++. |||-+ +.+.+++|+++|.+.|+-.
T Consensus 150 Aiaml~dmG~~SvKffPm~Gl----~~l~E~~avAka~a~~g~-----~lE----PTGGI-dl~N~~~I~~i~l~aGv~~ 215 (249)
T 3m0z_A 150 AIALLKDMGGSSIKYFPMGGL----KHRAEFEAVAKACAAHDF-----WLE----PTGGI-DLENYSEILKIALDAGVSK 215 (249)
T ss_dssp HHHHHHHTTCCEEEECCCTTT----TTHHHHHHHHHHHHHTTC-----EEE----EBSSC-CTTTHHHHHHHHHHHTCSC
T ss_pred HHHHHHHcCCCeeeEeecCCc----ccHHHHHHHHHHHHHcCc-----eEC----CCCCc-cHhhHHHHHHHHHHcCCCe
Confidence 44556667765 667777622 247787776666555542 433 78875 6788999999999999998
Q ss_pred EEccCCCCCccC
Q 013892 307 LADEVYQENVYV 318 (434)
Q Consensus 307 i~Deay~~~~~~ 318 (434)
|.=-+|...+-.
T Consensus 216 viPHIYssIIDk 227 (249)
T 3m0z_A 216 IIPHIYSSIIDK 227 (249)
T ss_dssp BCCBCCGGGBCT
T ss_pred ecccccceeccC
Confidence 888888886543
No 474
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=35.50 E-value=74 Score=23.94 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=38.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHH-HHHHHHHHHHHcCC-EEEEccCCC
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEE-NQRAIVDFCKKEGL-VLLADEVYQ 313 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~~~~~~~-~li~Deay~ 313 (434)
..+++.|.+.++++ ++..|++--|-|..|..-+.. ..++.++..++.++ +.++||-+.
T Consensus 37 ~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 45678888888887 788999999988777654422 33444444433354 566888664
No 475
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=35.35 E-value=44 Score=30.62 Aligned_cols=51 Identities=22% Similarity=0.278 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHc---CCEEEEccCCCC
Q 013892 257 VKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKE---GLVLLADEVYQE 314 (434)
Q Consensus 257 l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~---~~~li~Deay~~ 314 (434)
++..++...+.+.++++|. +|...+.+.++.+.++++++ ++.+++|-++..
T Consensus 64 ~~~~~~~~~~~d~~~~aik-------~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~ 117 (291)
T 3mbh_A 64 MPKIIAEWKKLEVQFDAIY-------TGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGD 117 (291)
T ss_dssp HHHHHHHHHHTTCCCSEEE-------ECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEE
T ss_pred HHHHHHHHHhcCCccCEEE-------ECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeee
Confidence 3333433333345777888 88888888888888888775 588999988764
No 476
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=35.28 E-value=58 Score=31.72 Aligned_cols=27 Identities=22% Similarity=0.393 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
+.++++++++.|+++|+-||+|-++-.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH 108 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNH 108 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 568999999999999999999998754
No 477
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=35.11 E-value=2.2e+02 Score=24.93 Aligned_cols=99 Identities=10% Similarity=0.021 Sum_probs=48.1
Q ss_pred CCEEEcCCh--HHHHHHHHHHHhcCCCCEEEEcCCCCh---hHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGA--SPAVHMMMQLLIRSENDGILCPIPQYP---LYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~--~~al~~~l~~l~~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+ ...-..+.+.|. ..|.+|++..-.-. .........+. +..+..|- -|.+.+++.++...
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~l~~~~~~-~~~~~~D~-----~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAERLRPEAEKLAEALGG-ALLFRADV-----TQDEELDALFAGVK 81 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGGGHHHHHHHHHHTTC-CEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEECCC-----CCHHHHHHHHHHHH
Confidence 346666654 233334445555 46777776543222 12222222332 44555553 26777777776654
Q ss_pred hcCCCeeEEEEecCCC-CC----c--cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGN-PT----G--QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~N-Pt----G--~~~~~~~l~~i~~ 297 (434)
++..+...++ +|..- +. + ...+.+++++..+
T Consensus 82 ~~~g~iD~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (261)
T 2wyu_A 82 EAFGGLDYLV-HAIAFAPREAMEGRYIDTRRQDWLLALE 119 (261)
T ss_dssp HHHSSEEEEE-ECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence 3322455444 44422 11 1 1356677766554
No 478
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=34.73 E-value=2e+02 Score=26.29 Aligned_cols=48 Identities=10% Similarity=0.237 Sum_probs=25.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHH
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKK 301 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~ 301 (434)
.+|.+.+++.++...+.| +..|+++ .++=-+..++.+|.+++++.+.+
T Consensus 28 ~iD~~~l~~lv~~li~~G--v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~ 75 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQG--IDGLYVG-GSTGEAFVQSLSEREQVLEIVAE 75 (303)
T ss_dssp SBCHHHHHHHHHHHHHTT--CSEEEES-STTTTGGGSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcC--CCEEEEC-eeccChhhCCHHHHHHHHHHHHH
Confidence 566666666666554443 3344433 22222334666666666666554
No 479
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=34.57 E-value=2.5e+02 Score=25.13 Aligned_cols=99 Identities=7% Similarity=-0.033 Sum_probs=51.7
Q ss_pred CCEEEcCChH-HHH-HHHHHHHhcCCCCEEEEcCCCChh---HHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 013892 191 NDIFLTDGAS-PAV-HMMMQLLIRSENDGILCPIPQYPL---YSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAK 265 (434)
Q Consensus 191 ~~i~~t~G~~-~al-~~~l~~l~~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 265 (434)
..+++|.|+. .+| ..+.+.|. ..|..|++..-.-.. .....+..|. +..+.+|- -|.+.+++.++...
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la-~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~Dv-----~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSETFKKRVDPLAESLGV-KLTVPCDV-----SDAESVDNMFKVLA 103 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHHHHTC-CEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHH-HCCCEEEEEeCChHHHHHHHHHHHhcCC-eEEEEcCC-----CCHHHHHHHHHHHH
Confidence 4567776653 233 34455555 578777776543221 2223333343 45566553 36788888877654
Q ss_pred hcCCCeeEEEEecCCCCC-----c--cCCCHHHHHHHHH
Q 013892 266 AKGITVRALVVINPGNPT-----G--QVLAEENQRAIVD 297 (434)
Q Consensus 266 ~~g~~~~~i~l~~p~NPt-----G--~~~~~~~l~~i~~ 297 (434)
++..+...+| +|..-.. + ...+.++|+++.+
T Consensus 104 ~~~g~iD~lV-nnAG~~~~~~~~~~~~~~~~~~~~~~~~ 141 (296)
T 3k31_A 104 EEWGSLDFVV-HAVAFSDKNELKGRYVDTSLGNFLTSMH 141 (296)
T ss_dssp HHHSCCSEEE-ECCCCCCHHHHTSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCcccccCChhhCCHHHHHHHHH
Confidence 4422555544 4442211 1 2456677776655
No 480
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=34.30 E-value=3.2e+02 Score=32.08 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=55.3
Q ss_pred CCCCCCEEEcCChHH-HHHHHHHHHhcCCCCEEEEcC-CCChhHHH----HHHHc---CCeEEEEecCCCCCCCCCHHHH
Q 013892 187 PADPNDIFLTDGASP-AVHMMMQLLIRSENDGILCPI-PQYPLYSA----SIALH---GGTLVPYYLDEATGWGLETSEV 257 (434)
Q Consensus 187 ~~~~~~i~~t~G~~~-al~~~l~~l~~~~gd~Vlv~~-p~y~~~~~----~~~~~---g~~~~~~~~~~~~~~~~d~~~l 257 (434)
......++||.|+.. .-..+.+.|. ..|-.|++.. -.-..... +.+.. |.++..+++|-. |.+.+
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA-~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVs-----d~esV 722 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLL-SGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQG-----SKQDV 722 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHH-HTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTT-----CHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCC-----CHHHH
Confidence 344445667766654 3344445555 5787777752 22222221 22222 778888887743 78888
Q ss_pred HHHHHHHHhc---CC-CeeEEEEecCC-CCCc---cCCC--HHHHHHHH
Q 013892 258 KKQLEAAKAK---GI-TVRALVVINPG-NPTG---QVLA--EENQRAIV 296 (434)
Q Consensus 258 ~~~l~~~~~~---g~-~~~~i~l~~p~-NPtG---~~~~--~~~l~~i~ 296 (434)
++.++...++ .. +..+|| +|.. ...| ..++ .++++++.
T Consensus 723 ~alv~~i~~~~~~~G~~IDiLV-nNAGi~~~~~~l~d~t~~~e~~~~vl 770 (1878)
T 2uv9_A 723 EALVNYIYDTKNGLGWDLDYVV-PFAAIPENGREIDSIDSKSELAHRIM 770 (1878)
T ss_dssp HHHHHHHHCSSSSCCCCCSEEE-ECCCCCCTTCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCCcEEE-eCcccccCCCChhhcCcCHHHHHHHH
Confidence 8888876554 22 344444 4442 2233 2334 46665544
No 481
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=34.22 E-value=96 Score=28.33 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+.+.+...+.-+ ..--|+++.|+ .+++.++-.+-- ..-|.|++..|.|.
T Consensus 56 r~~v~~~~~~~~~---gr~pvi~Gvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~----------------------- 108 (291)
T 3a5f_A 56 RKETIKFVIDKVN---KRIPVIAGTGSNNTAASIAMSKWAES-IGVDGLLVITPYYN----------------------- 108 (291)
T ss_dssp HHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHHh-cCCCEEEEcCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
.++-+.+.+..+...+.- +...++.++|.. ||..++.+.+.+|++
T Consensus 109 -~~s~~~l~~~f~~ia~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 153 (291)
T 3a5f_A 109 -KTTQKGLVKHFKAVSDAV-STPIIIYNVPGR-TGLNITPGTLKELCE 153 (291)
T ss_dssp -CCCHHHHHHHC-CTGGGC-CSCEEEEECHHH-HSCCCCHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCCCCCHHHHHHHHc
No 482
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=33.89 E-value=1.8e+02 Score=26.23 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHhcC--CCeeEEEEecCCCCCccCCCHHHHHHHHHHHH---HcC--CEEEEccCC
Q 013892 252 LETSEVKKQLEAAKAKG--ITVRALVVINPGNPTGQVLAEENQRAIVDFCK---KEG--LVLLADEVY 312 (434)
Q Consensus 252 ~d~~~l~~~l~~~~~~g--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~---~~~--~~li~Deay 312 (434)
++.+.+++.++...+.+ .+.++|+ +|...+.+..+.+.++++ +++ +.+++|-++
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~d~v~-------~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm 117 (289)
T 3pzs_A 57 MPASHLTDIVQGIADIDRLKDCDAVL-------SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVM 117 (289)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCCEEE-------ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCC
T ss_pred CCHHHHHHHHHHHHhcCCccCCCEEE-------ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCcc
Confidence 34566766666554321 1456666 677777766666666554 435 899999544
No 483
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.86 E-value=2.8e+02 Score=25.41 Aligned_cols=33 Identities=6% Similarity=0.003 Sum_probs=20.1
Q ss_pred CEEEcCCh---HHHHHHHHHHHhcCCCCEEEEcCCCC
Q 013892 192 DIFLTDGA---SPAVHMMMQLLIRSENDGILCPIPQY 225 (434)
Q Consensus 192 ~i~~t~G~---~~al~~~l~~l~~~~gd~Vlv~~p~y 225 (434)
-|+++.|+ .+++.++-.+-- -.-|.|++..|.|
T Consensus 79 pviaGvg~~~t~~ai~la~~A~~-~Gadavlv~~Pyy 114 (309)
T 3fkr_A 79 PVIVTTSHYSTQVCAARSLRAQQ-LGAAMVMAMPPYH 114 (309)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHH-TTCSEEEECCSCB
T ss_pred cEEEecCCchHHHHHHHHHHHHH-cCCCEEEEcCCCC
Confidence 37766553 455555444332 2348999988987
No 484
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=33.79 E-value=1.1e+02 Score=25.07 Aligned_cols=59 Identities=12% Similarity=-0.005 Sum_probs=40.2
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcC
Q 013892 229 SASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEG 303 (434)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~ 303 (434)
...++..|.+++.... ...++++.+++.+. ++.+|.++.-.. ...+.+.++++.+++.+
T Consensus 39 a~~l~~~G~eVi~lG~------~~p~e~lv~aa~~~-----~~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 39 ARALRDAGFEVVYTGL------RQTPEQVAMAAVQE-----DVDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHHHTTCEEECCCS------BCCHHHHHHHHHHT-----TCSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHhc-----CCCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 3456778888886643 34678888877764 677777774322 23567888888888764
No 485
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=33.60 E-value=1.2e+02 Score=28.35 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=32.9
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccCCCCCc
Q 013892 279 PGNPTGQVLAEENQRAIVDFCKKEGLVLLADEVYQENV 316 (434)
Q Consensus 279 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 316 (434)
-.||.|...+.+...++++.|+++|+-+++|--|++..
T Consensus 49 ~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 49 WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred EECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 36788888999999999999999999999998776643
No 486
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=33.30 E-value=53 Score=30.91 Aligned_cols=78 Identities=13% Similarity=0.283 Sum_probs=49.5
Q ss_pred CCCChhHHHHHHHc-CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHH
Q 013892 222 IPQYPLYSASIALH-GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCK 300 (434)
Q Consensus 222 ~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~ 300 (434)
-|.|....++.... ++.+..+..... .-.+.+.+++..+ .++.+++..-+ ++.++.++|.++|+
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~-----Gv~~vViiT~G------~~e~~~~~l~~~a~ 128 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYA-----QIRTIAIIAEG------IPEALTRKLIKKAD 128 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTST-----TCCEEEECCSC------CCHHHHHHHHHHHH
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHC-----CCCEEEEECCC------CCHHHHHHHHHHHH
Confidence 47788888877654 455554433321 1235555656522 67777776433 34477899999999
Q ss_pred HcCCEEEEccCCCC
Q 013892 301 KEGLVLLADEVYQE 314 (434)
Q Consensus 301 ~~~~~li~Deay~~ 314 (434)
++|+.||==.+.+-
T Consensus 129 ~~g~rliGPNc~Gi 142 (334)
T 3mwd_B 129 QKGVTIIGPATVGG 142 (334)
T ss_dssp HHTCEEECSSCCCE
T ss_pred HcCCEEEccCCccc
Confidence 99998886666543
No 487
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=33.18 E-value=2.1e+02 Score=26.10 Aligned_cols=95 Identities=9% Similarity=0.169 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCCCCEEEcCC---hHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCC
Q 013892 173 RDTIAAGIEARDGFPADPNDIFLTDG---ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 249 (434)
Q Consensus 173 r~~ia~~~~~~~g~~~~~~~i~~t~G---~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 249 (434)
|+++.+...+.-+ ..-.|+++.| ..+++.++-.+-- -.-|.|++..|.|.
T Consensus 62 r~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~----------------------- 114 (297)
T 3flu_A 62 HTAVIEAVVKHVA---KRVPVIAGTGANNTVEAIALSQAAEK-AGADYTLSVVPYYN----------------------- 114 (297)
T ss_dssp HHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSS-----------------------
T ss_pred HHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHH-cCCCEEEECCCCCC-----------------------
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHH
Q 013892 250 WGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVD 297 (434)
Q Consensus 250 ~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~ 297 (434)
..+-+.+.+..+...+.- +..+++.++|.. ||..++.+.+.+|++
T Consensus 115 -~~~~~~l~~~f~~va~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 115 -KPSQEGIYQHFKTIAEAT-SIPMIIYNVPGR-TVVSMTNDTILRLAE 159 (297)
T ss_dssp -CCCHHHHHHHHHHHHHHC-CSCEEEEECHHH-HSSCCCHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHHHHhC-CCCEEEEECCch-hccCCCHHHHHHHHc
No 488
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=33.17 E-value=2.8e+02 Score=25.16 Aligned_cols=110 Identities=11% Similarity=0.074 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCC
Q 013892 171 GLRDTIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGW 250 (434)
Q Consensus 171 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (434)
++++.|.-+- ..+|.+.+|+| ++..++. .| .+..|...++.+|+..+.+.- +..
T Consensus 81 ~l~ekI~l~~---------~~gV~v~~GGT-----lfE~~l~-qg--------~~~~yl~~~k~lGF~~IEISd---Gti 134 (276)
T 1u83_A 81 DLEEKISTLK---------EHDITFFFGGT-----LFEKYVS-QK--------KVNEFHRYCTYFGCEYIEISN---GTL 134 (276)
T ss_dssp THHHHHHHHH---------HTTCEEEECHH-----HHHHHHH-TT--------CHHHHHHHHHHTTCSEEEECC---SSS
T ss_pred HHHHHHHHHH---------HcCCeEeCCcH-----HHHHHHH-cC--------cHHHHHHHHHHcCCCEEEECC---Ccc
Confidence 3666665543 12588888986 3333331 23 678899999999999999863 344
Q ss_pred CCCHHHHHHHHHHHHhcCCCeeEEEEecC--CCC-CccCCCHHHHHHHHHHHHHcCCEEEEccC
Q 013892 251 GLETSEVKKQLEAAKAKGITVRALVVINP--GNP-TGQVLAEENQRAIVDFCKKEGLVLLADEV 311 (434)
Q Consensus 251 ~~d~~~l~~~l~~~~~~g~~~~~i~l~~p--~NP-tG~~~~~~~l~~i~~~~~~~~~~li~Dea 311 (434)
.++.+...+.|+.+. ....++... -+| ....++.++|-+.++-+-+.|...|.=|+
T Consensus 135 ~l~~~~~~~lI~~a~-----~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEa 193 (276)
T 1u83_A 135 PMTNKEKAAYIADFS-----DEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA 193 (276)
T ss_dssp CCCHHHHHHHHHHHT-----TTSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC-
T ss_pred cCCHHHHHHHHHHHH-----hhcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEee
Confidence 788899999998763 224455543 233 23456667777777777788886665555
No 489
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=33.15 E-value=25 Score=36.97 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEccCCC
Q 013892 289 EENQRAIVDFCKKEGLVLLADEVYQ 313 (434)
Q Consensus 289 ~~~l~~i~~~~~~~~~~li~Deay~ 313 (434)
.++++++++-|+++|+-||.|-||-
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 6899999999999999999998885
No 490
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=33.01 E-value=1.8e+02 Score=28.71 Aligned_cols=101 Identities=15% Similarity=0.121 Sum_probs=52.8
Q ss_pred CCCCCEEEcCChHHHHHH-HHHHHhcCCCC-EEEEcCCCC------hhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHH
Q 013892 188 ADPNDIFLTDGASPAVHM-MMQLLIRSEND-GILCPIPQY------PLYSASIALHGGTLVPYYLDEATGWGLETSEVKK 259 (434)
Q Consensus 188 ~~~~~i~~t~G~~~al~~-~l~~l~~~~gd-~Vlv~~p~y------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 259 (434)
..++..++.+|++.+|.. +.+.|. ..|. .|++..-.- ......++..|.++..+.+|- -|.+.+++
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La-~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv-----~d~~~v~~ 296 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLA-RRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV-----TDRESVRE 296 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHH-HHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHH-HcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCC-----CCHHHHHH
Confidence 344555555555555544 444555 4564 354432221 122334556688888888774 37888888
Q ss_pred HHHHHHhcCCCeeEEEEecCCCCCcc--CCCHHHHHHH
Q 013892 260 QLEAAKAKGITVRALVVINPGNPTGQ--VLAEENQRAI 295 (434)
Q Consensus 260 ~l~~~~~~g~~~~~i~l~~p~NPtG~--~~~~~~l~~i 295 (434)
.++..... .+...||-+-.....+. ..+.++++++
T Consensus 297 ~~~~i~~~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~ 333 (486)
T 2fr1_A 297 LLGGIGDD-VPLSAVFHAAATLDDGTVDTLTGERIERA 333 (486)
T ss_dssp HHHTSCTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred HHHHHHhc-CCCcEEEECCccCCCCccccCCHHHHHHH
Confidence 88765222 24565554422222222 3456666554
No 491
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=32.95 E-value=1.9e+02 Score=26.43 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=39.8
Q ss_pred EEEcCC---hHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCC
Q 013892 193 IFLTDG---ASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGI 269 (434)
Q Consensus 193 i~~t~G---~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~ 269 (434)
|+++.| ..+++.++-.+-- -.-|.|++..|.|.. ++.+.+.+.++...+.-
T Consensus 76 viaGvg~~~t~~ai~la~~a~~-~Gadavlv~~P~y~~------------------------~~~~~l~~~f~~va~a~- 129 (300)
T 3eb2_A 76 VVAGVASTSVADAVAQAKLYEK-LGADGILAILEAYFP------------------------LKDAQIESYFRAIADAV- 129 (300)
T ss_dssp BEEEEEESSHHHHHHHHHHHHH-HTCSEEEEEECCSSC------------------------CCHHHHHHHHHHHHHHC-
T ss_pred EEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEcCCCCCC------------------------CCHHHHHHHHHHHHHHC-
Confidence 565544 4566655544432 244899998888752 12233333333221111
Q ss_pred CeeEEEEecCCCCCccCCCHHHHHHH
Q 013892 270 TVRALVVINPGNPTGQVLAEENQRAI 295 (434)
Q Consensus 270 ~~~~i~l~~p~NPtG~~~~~~~l~~i 295 (434)
+..+++.++|.. ||..++.+.+.+|
T Consensus 130 ~lPiilYn~P~~-tg~~l~~~~~~~L 154 (300)
T 3eb2_A 130 EIPVVIYTNPQF-QRSDLTLDVIARL 154 (300)
T ss_dssp SSCEEEEECTTT-CSSCCCHHHHHHH
T ss_pred CCCEEEEECccc-cCCCCCHHHHHHH
Confidence 344566666664 7777775555444
No 492
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=32.93 E-value=1.5e+02 Score=26.84 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=37.6
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 013892 249 GWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLADE 310 (434)
Q Consensus 249 ~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De 310 (434)
+|.+|...+..+... ...+|+|... .++.++++++++.|++.|+.++++-
T Consensus 120 dfiid~~qv~~A~~~------GAD~VlLi~a------~l~~~~l~~l~~~a~~lGl~~lvev 169 (272)
T 3qja_A 120 DFVVQPYQIHEARAH------GADMLLLIVA------ALEQSVLVSMLDRTESLGMTALVEV 169 (272)
T ss_dssp SCCCSHHHHHHHHHT------TCSEEEEEGG------GSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCHHHHHHHHHc------CCCEEEEecc------cCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 478888777776654 5677777533 3457889999999999999888764
No 493
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=32.93 E-value=3.1e+02 Score=25.64 Aligned_cols=152 Identities=8% Similarity=-0.005 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCCh-----------------HHHHH
Q 013892 142 ADSIERAWQILDQIPGRATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDGA-----------------SPAVH 204 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~-----------------~~al~ 204 (434)
.++.+.+..+++..-. ...-.+..|.-.-.+.|.+++++. ++..+++++++=. ..++.
T Consensus 67 ~~~~~~l~~Al~~Gi~--~~DTA~~Yg~G~sE~~lG~al~~~---~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e 141 (367)
T 3lut_A 67 EMAEHLMTLAYDNGIN--LFDTAEVYAAGKAEVVLGNIIKKK---GWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLK 141 (367)
T ss_dssp HHHHHHHHHHHHTTCC--EEEEETTGGGGHHHHHHHHHHHHH---TCCGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC--EEECccccCCCchHHHHHHHHHhC---CCCCceEEEEeccccCCCCccCCCCCHHHHHHHHH
Q ss_pred HHHHHHhcCCCCEEEEcCCCCh----hHHHHHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEec
Q 013892 205 MMMQLLIRSENDGILCPIPQYP----LYSASIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVIN 278 (434)
Q Consensus 205 ~~l~~l~~~~gd~Vlv~~p~y~----~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~ 278 (434)
..++.|-.+.=|-+++..|... .....++.+ .+++..+-+. ..+.+.+++++......+ .++..++..
T Consensus 142 ~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvS-----n~~~~~l~~~~~~~~~~~-~~~~~~~Q~ 215 (367)
T 3lut_A 142 ASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTS-----RWSSMEIMEAYSVARQFN-LIPPICEQA 215 (367)
T ss_dssp HHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEE-----SCCHHHHHHHHHHHHHHT-CCCCCEEEE
T ss_pred HHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEec-----CCCHHHHHHHHHHHHHcC-CCCceeeec
Q ss_pred CCCCCccCCCHHHHH-HHHHHHHHcCCEEEE
Q 013892 279 PGNPTGQVLAEENQR-AIVDFCKKEGLVLLA 308 (434)
Q Consensus 279 p~NPtG~~~~~~~l~-~i~~~~~~~~~~li~ 308 (434)
..|| +..+..+ +++++|+++|+.++.
T Consensus 216 ~~~~----~~~~~~e~~l~~~~~~~gi~v~a 242 (367)
T 3lut_A 216 EYHM----FQREKVEVQLPELFHKIGVGAMT 242 (367)
T ss_dssp ECBT----TBCHHHHTHHHHHHHHHCCEEEE
T ss_pred cccc----eecchhHhHHHHHHHHcCCeEEE
No 494
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=32.83 E-value=2.7e+02 Score=24.90 Aligned_cols=146 Identities=17% Similarity=0.259 Sum_probs=70.4
Q ss_pred CHHHHHHHHHHHHcCCC--CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcCC------hH----HHHHHHHH
Q 013892 141 SADSIERAWQILDQIPG--RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTDG------AS----PAVHMMMQ 208 (434)
Q Consensus 141 p~~v~~~~~~~l~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G------~~----~al~~~l~ 208 (434)
..++.+.+..+++.... +....|+. .+.+.+++.+. + ...+++++++= +. .++...++
T Consensus 30 ~~~~~~~l~~Al~~G~~~~DTA~~Yg~-------E~~lG~al~~~-~--~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~ 99 (276)
T 3f7j_A 30 GNEATESVKAAIKNGYRSIDTAAIYKN-------EEGVGIGIKES-G--VAREELFITSKVWNEDQGYETTLAAFEKSLE 99 (276)
T ss_dssp THHHHHHHHHHHHTTCCEEECCGGGSC-------HHHHHHHHHHH-C--SCGGGCEEEEEECGGGCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEECcCcccC-------HHHHHHHHhhc-C--CCcccEEEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 35566666777765322 11234542 34455555432 2 34566766542 12 23333333
Q ss_pred HHhcCCCCEEEEcCCCChhHHH---HHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCC
Q 013892 209 LLIRSENDGILCPIPQYPLYSA---SIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPT 283 (434)
Q Consensus 209 ~l~~~~gd~Vlv~~p~y~~~~~---~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPt 283 (434)
.|-.+.=|-+++..|....+.. .++.+ .+++..+-+. ..+.+.+++.++.. ..+.++.....||.
T Consensus 100 rLg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iGvS-----n~~~~~l~~~~~~~-----~~~~~~~Q~~~~~~ 169 (276)
T 3f7j_A 100 RLQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS-----NFQVHHLEELLKDA-----EIKPMVNQVEFHPR 169 (276)
T ss_dssp HHTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEEEE-----SCCHHHHHHHHHHC-----SSCCSEEEEECBTT
T ss_pred HhCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEEec-----cCCHHHHHHHHHhc-----CCCceeeeeeeccc
Confidence 3421223667777665432222 22221 3455555443 34677777776652 22222222223332
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEccCC
Q 013892 284 GQVLAEENQRAIVDFCKKEGLVLLADEVY 312 (434)
Q Consensus 284 G~~~~~~~l~~i~~~~~~~~~~li~Deay 312 (434)
- . -.+++++|+++|+.++.=...
T Consensus 170 ~---~---~~~l~~~~~~~gi~v~a~spl 192 (276)
T 3f7j_A 170 L---T---QKELRDYCKGQGIQLEAWSPL 192 (276)
T ss_dssp B---C---CHHHHHHHHHHTCEEEEESTT
T ss_pred c---C---CHHHHHHHHHCCCEEEEecCC
Confidence 1 1 156888888888888764433
No 495
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=32.76 E-value=78 Score=27.44 Aligned_cols=39 Identities=15% Similarity=0.339 Sum_probs=28.4
Q ss_pred cCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 013892 267 KGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVLLA 308 (434)
Q Consensus 267 ~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 308 (434)
.|..+.++++.-..|+.|.... +.++.+++++||+.+|.
T Consensus 156 AGl~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 156 AGLQPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp TTSCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred cCCCceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 4545655555455689999988 77778899999987663
No 496
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=32.75 E-value=1e+02 Score=27.14 Aligned_cols=78 Identities=9% Similarity=-0.050 Sum_probs=41.0
Q ss_pred CEEEcCChHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-----CCeEEEEecCCCCCCCCCHHHHHHHHHHHHh
Q 013892 192 DIFLTDGASPAVHMMMQLLIRSENDGILCPIPQYPLYSASIALH-----GGTLVPYYLDEATGWGLETSEVKKQLEAAKA 266 (434)
Q Consensus 192 ~i~~t~G~~~al~~~l~~l~~~~gd~Vlv~~p~y~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 266 (434)
.+++|.|+...-..+.+.|. ..|..|++..-.-.......... +.++..+.+|- -|.+.+++.++...+
T Consensus 9 ~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 9 VALVTGAAQGIGRAFAEALL-LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-----ADQQQLRDTFRKVVD 82 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCC-----CCHHHHHHHHHHHHH
Confidence 45565554444445555666 57888877553322222222221 34566666653 367788877766433
Q ss_pred cCCCeeEEE
Q 013892 267 KGITVRALV 275 (434)
Q Consensus 267 ~g~~~~~i~ 275 (434)
+..+...++
T Consensus 83 ~~g~id~lv 91 (267)
T 2gdz_A 83 HFGRLDILV 91 (267)
T ss_dssp HHSCCCEEE
T ss_pred HcCCCCEEE
Confidence 322455444
No 497
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=32.69 E-value=2.8e+02 Score=25.14 Aligned_cols=144 Identities=12% Similarity=0.114 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHcCCC--CCCCCCCCCcchHHHHHHHHHHHHhhcCCCCCCCCEEEcC--------ChHHHHHHHHHHHh
Q 013892 142 ADSIERAWQILDQIPG--RATGAYSHSQGIKGLRDTIAAGIEARDGFPADPNDIFLTD--------GASPAVHMMMQLLI 211 (434)
Q Consensus 142 ~~v~~~~~~~l~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~--------G~~~al~~~l~~l~ 211 (434)
.++.+.+..+++..-. +....|+ . .+.+.+++.+. | ...+++++++ ....++...++.|-
T Consensus 49 ~~~~~~l~~Al~~Gi~~~DTA~~Yg----~---E~~vG~al~~~-~--~~R~~v~I~TK~~~~~~~~v~~~~e~SL~rLg 118 (296)
T 1mzr_A 49 EEVITAIQKALEVGYRSIDTAAAYK----N---EEGVGKALKNA-S--VNREELFITTKLWNDDHKRPREALLDSLKKLQ 118 (296)
T ss_dssp HHHHHHHHHHHHHTCCEEECCGGGT----C---HHHHHHHHHHS-C--SCGGGCEEEEEECGGGTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEECCcccc----C---HHHHHHHHHhc-C--CCcccEEEEeccCCCcHHHHHHHHHHHHHHhC
Confidence 3455556666665321 1133454 2 34566666541 2 3456666654 23456666666663
Q ss_pred cCCCCEEEEcCCCC--hhHHH---HHHHc--CCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCc
Q 013892 212 RSENDGILCPIPQY--PLYSA---SIALH--GGTLVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTG 284 (434)
Q Consensus 212 ~~~gd~Vlv~~p~y--~~~~~---~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG 284 (434)
.+.=|-+++..|.. ..+.. .++.+ .+++..+-+. ..+.+.+++.++.. +.+..+....-||.-
T Consensus 119 ~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS-----n~~~~~l~~~~~~~-----~~~p~v~Q~~~~~~~ 188 (296)
T 1mzr_A 119 LDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVC-----NFQIHHLQRLIDET-----GVTPVINQIELHPLM 188 (296)
T ss_dssp CSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEE-----SCCHHHHHHHHHHH-----SCCCSEEEEECBTTB
T ss_pred CCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEe-----CCCHHHHHHHHHhc-----CCCceEEeeeccccc
Confidence 22336677776643 12222 22221 3455555443 33677777777653 222122222233321
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccC
Q 013892 285 QVLAEENQRAIVDFCKKEGLVLLADEV 311 (434)
Q Consensus 285 ~~~~~~~l~~i~~~~~~~~~~li~Dea 311 (434)
. . .+++++|+++|+.++.=..
T Consensus 189 ~--~----~~l~~~~~~~gI~v~a~sp 209 (296)
T 1mzr_A 189 Q--Q----RQLHAWNATHKIQTESWSP 209 (296)
T ss_dssp C--C----HHHHHHHHHTTCEEEEEST
T ss_pred C--C----HHHHHHHHHCCCeEEEecc
Confidence 1 1 4688888888888875433
No 498
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=32.44 E-value=2.4e+02 Score=27.41 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=49.8
Q ss_pred CEEEcCChHHHH-HHHHHHHhcCCCCEEEEcCCC--ChhHHHHHHHcCCeEEEEecCCCCCCCCCHHHHHHHHHHHHhcC
Q 013892 192 DIFLTDGASPAV-HMMMQLLIRSENDGILCPIPQ--YPLYSASIALHGGTLVPYYLDEATGWGLETSEVKKQLEAAKAKG 268 (434)
Q Consensus 192 ~i~~t~G~~~al-~~~l~~l~~~~gd~Vlv~~p~--y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g 268 (434)
.+++.+|++.+| ..+.+.|. ..|-+|++..-. -..........+..++..++. |.+.+++.++...++.
T Consensus 214 k~~LVTGgsgGIG~aiA~~La-~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-------d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFA-RDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-------ADDAVDKITAHVTEHH 285 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHH-HTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-------STTHHHHHHHHHHHHS
T ss_pred CEEEEeCCchHHHHHHHHHHH-HCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-------CHHHHHHHHHHHHHHc
Confidence 344444554555 44455565 567777765422 122334455567665544433 4456666665543332
Q ss_pred -CCeeEEEEecCCCCCc--cCCCHHHHHHHHHH
Q 013892 269 -ITVRALVVINPGNPTG--QVLAEENQRAIVDF 298 (434)
Q Consensus 269 -~~~~~i~l~~p~NPtG--~~~~~~~l~~i~~~ 298 (434)
.+...||-+-.....+ ..++.++|+++.+.
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~ 318 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAV 318 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHH
Confidence 2365555442222222 24677778776653
No 499
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=32.17 E-value=27 Score=34.22 Aligned_cols=27 Identities=15% Similarity=0.332 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCC
Q 013892 288 AEENQRAIVDFCKKEGLVLLADEVYQE 314 (434)
Q Consensus 288 ~~~~l~~i~~~~~~~~~~li~Deay~~ 314 (434)
+.++++++++-|+++|+-||.|-|+-.
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH 89 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINH 89 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecc
Confidence 478999999999999999999999865
No 500
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=31.82 E-value=65 Score=28.81 Aligned_cols=76 Identities=21% Similarity=0.284 Sum_probs=52.6
Q ss_pred HHHHHHHcCCe-EEEEecCCCCCCCCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 013892 228 YSASIALHGGT-LVPYYLDEATGWGLETSEVKKQLEAAKAKGITVRALVVINPGNPTGQVLAEENQRAIVDFCKKEGLVL 306 (434)
Q Consensus 228 ~~~~~~~~g~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~g~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 306 (434)
-..+++..|+. +.++|+.-. -.+|++....+...++|. ++. |||-+ +.+.+++|+++|.+.|+-.
T Consensus 173 Aiaml~dmG~~SvKffPM~Gl----~~leEl~avAkAca~~g~-----~lE----PTGGI-dl~Nf~~I~~i~l~aGv~~ 238 (275)
T 3m6y_A 173 AIALVRDMGGNSLKYFPMKGL----AHEEEYRAVAKACAEEGF-----ALE----PTGGI-DKENFETIVRIALEANVEQ 238 (275)
T ss_dssp HHHHHHHHTCCEEEECCCTTT----TTHHHHHHHHHHHHHHTC-----EEE----EBSSC-CTTTHHHHHHHHHHTTCSC
T ss_pred HHHHHHHcCCCeeeEeecCCc----ccHHHHHHHHHHHHHcCc-----eEC----CCCCc-cHhHHHHHHHHHHHcCCCe
Confidence 34456666664 667777622 246777776666544442 433 78875 6788999999999999988
Q ss_pred EEccCCCCCcc
Q 013892 307 LADEVYQENVY 317 (434)
Q Consensus 307 i~Deay~~~~~ 317 (434)
|.=-+|...+-
T Consensus 239 viPHIYsSIID 249 (275)
T 3m6y_A 239 VIPHVYSSIID 249 (275)
T ss_dssp BCCEECGGGBC
T ss_pred ecccccceecc
Confidence 88888887654
Done!