Query 013894
Match_columns 434
No_of_seqs 219 out of 1612
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 19:06:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013894.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013894hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x38_A Beta-D-glucan exohydrol 100.0 1.3E-98 4E-103 794.1 34.6 422 4-430 176-602 (602)
2 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 3E-96 1E-100 787.2 24.8 413 7-433 177-618 (822)
3 3abz_A Beta-glucosidase I; gly 100.0 1.7E-90 5.8E-95 751.9 20.3 400 6-432 116-725 (845)
4 3zyz_A Beta-D-glucoside glucoh 100.0 2.7E-90 9.2E-95 740.3 20.0 407 6-432 128-584 (713)
5 2x41_A Beta-glucosidase; hydro 100.0 1.8E-88 6.1E-93 730.0 13.3 394 6-432 133-605 (721)
6 3bmx_A Uncharacterized lipopro 100.0 5.4E-81 1.8E-85 663.5 22.1 385 6-433 191-642 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 2E-57 6.8E-62 467.0 18.2 342 6-388 165-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 1.2E-44 4.1E-49 356.3 6.1 184 6-195 148-342 (351)
9 4g6c_A Beta-hexosaminidase 1; 100.0 4.9E-38 1.7E-42 308.6 1.7 170 6-184 146-322 (348)
10 4gvf_A Beta-hexosaminidase; TI 100.0 6.2E-38 2.1E-42 307.6 -4.0 169 6-179 133-309 (349)
11 2oxn_A Beta-hexosaminidase; TI 100.0 4.9E-38 1.7E-42 308.0 -7.0 168 6-179 130-303 (340)
12 3lab_A Putative KDPG (2-keto-3 54.0 23 0.00079 31.6 6.2 58 66-144 78-137 (217)
13 1wv2_A Thiazole moeity, thiazo 31.4 1.5E+02 0.0052 27.1 7.9 84 67-163 150-239 (265)
14 2ash_A Queuine tRNA-ribosyltra 28.2 84 0.0029 30.5 5.9 71 100-181 88-177 (381)
15 1gng_X Frattide, glycogen synt 26.5 44 0.0015 20.8 2.3 22 153-178 13-34 (39)
16 3eul_A Possible nitrate/nitrit 23.2 1.9E+02 0.0067 22.5 6.7 35 131-165 103-138 (152)
17 1x9t_B N-terminl peptide of fi 22.3 28 0.00095 19.9 0.7 10 414-423 10-19 (26)
18 3bld_A Queuine tRNA-ribosyltra 21.1 2E+02 0.0069 27.9 7.1 71 100-181 89-179 (386)
19 3l0g_A Nicotinate-nucleotide p 20.9 75 0.0026 29.8 3.8 17 131-147 219-235 (300)
No 1
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=1.3e-98 Score=794.09 Aligned_cols=422 Identities=56% Similarity=0.991 Sum_probs=377.3
Q ss_pred eeeccCCCCCCCCCCCcccccCCCceeeeecccccCCCCcCCCcccCCCCCHHHHHHhchHHHHHHHHcCCCceeecccC
Q 013894 4 IVSGLQGRPPKEHPKGYPYVAGRNNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCISQGVCTIMASYSS 83 (434)
Q Consensus 4 ~v~g~qg~~~~~~~~g~a~~~G~~gv~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~vM~sy~~ 83 (434)
||+|||++.+..+..|..|+.+..||++|+|||||||+++.++|...+.+++++|+|+||+||+++|++|+.+|||||+.
T Consensus 176 ~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~ag~~~vM~sy~~ 255 (602)
T 1x38_A 176 LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMDKGVSTVMISYSS 255 (602)
T ss_dssp HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHHHTTCCEEEECSSE
T ss_pred HHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHHHHHHHHHHHHHcCCCEEEecccc
Confidence 55555553322222222222222599999999999999988878777789999999999999999999999999999999
Q ss_pred CCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHHHHHHHHCC
Q 013894 84 WNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLTYLVESG 163 (434)
Q Consensus 84 ~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~av~~g 163 (434)
+||+|+|+|+++|++|||+||||+|+|||||++|.++...++.+..+++++|++||+||+|+|.++..+.+.|.+||++|
T Consensus 256 v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G 335 (602)
T 1x38_A 256 WNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGG 335 (602)
T ss_dssp ETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTT
T ss_pred cCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcCCCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998767767788999999999999999988877889999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhhhcchhHHHHHHHHHhccEEEcccCCCCCC--C---ccCCCCCCC
Q 013894 164 KVPMSRIDDAVERILRVKFVAGLFEYPFSDKSLLNIVGCKLHRELAREAVRKSLVLLKNGKKPEK--P---FLPLDRNAK 238 (434)
Q Consensus 164 ~~~~~~id~a~~ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~--~---~LPL~~~~~ 238 (434)
.++++|||+|++|||++|+++|+|++|+.+......+++++|+++++++|++||||||| ++ + +|||+++.+
T Consensus 336 ~i~~~~id~av~RiL~~k~~~glf~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN----~~~~~~~~~LPL~~~~~ 411 (602)
T 1x38_A 336 VIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKN----GKTSTDAPLLPLPKKAP 411 (602)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHHCEEEEE----CSSTTSCCCCSCCSCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCCCCCCcchhhccCCHHHHHHHHHHHHhceEEecc----CCCCCcccccccCCCCC
Confidence 99999999999999999999999999987655445789999999999999999999999 55 4 999987568
Q ss_pred eEEEEeeccccccccCCCCceeccCCCCCccccCCHHHHHHhHcCCCcEEEEccCCChhhhhcCCCceEEEEeeCCCCcc
Q 013894 239 RILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEAVGDETEVIYEKYPSPDTFVAGDFSFAIAAVGEEPYAE 318 (434)
Q Consensus 239 kIavig~~a~~~~~~~g~~~~~~~g~~g~~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~a~~ad~~iv~~g~~~~~~ 318 (434)
||+|+|++++....++|+|+..|++.++......++++++++++.....+.|..+++.....++.+|++||++|.+++.+
T Consensus 412 ~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~a~~aD~viv~~g~~~~~e 491 (602)
T 1x38_A 412 KILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYAIVAVGEHPYTE 491 (602)
T ss_dssp EEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHHHHSCTTCEEEEESSCCHHHHHHTTCSCEEEEEECCCCCG
T ss_pred EEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHHHHhCCCeEEEEcCCCCHHHHHHhhCCEEEEEeccCcccc
Confidence 99999999998878899999888887666667789999999987766788888877655555789999999999988888
Q ss_pred ccCCCCCccCCcchHHHHHHHHcCCCeEEEEEcCCceecCccccCCCcEEEEccCCCchHHHHHHHHhcCCCCCcccccc
Q 013894 319 TLGDNSELIIPLNGGDVISLVAERIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSEGSGIADVVFGDHDFTGRLPVT 398 (434)
Q Consensus 319 ~~gd~~~l~l~~~q~~li~~v~~~~~~vvV~~~g~P~~l~~~~~~~~~ail~a~~~g~~~~aiadvL~G~~~PsGkLPvT 398 (434)
.+|||.++.||..|.+||+++++++|+|||+++|+|+.+.+| .++++|||++|+||++++|+||||||++||+||||+|
T Consensus 492 ~~gdr~~l~lp~~q~~li~~v~~~~~~VvVl~~g~P~~l~~~-~~~~~Ail~a~~pG~~g~AiadvL~G~~nPsGkLP~t 570 (602)
T 1x38_A 492 TKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPL-LAASDALVAAWLPGSEGQGVTDALFGDFGFTGRLPRT 570 (602)
T ss_dssp GGGCCSSCCCCSSSHHHHHHHHTTSCEEEEEECSSCCCCHHH-HHHCSEEEEEECCCSBTHHHHHHHTTSSCCCCCCSSC
T ss_pred cCCCcCCcCCChhHHHHHHHHHhCCCEEEEEeCCCceeccch-hhccCeEEeccCCchHHHHHHHHHcCCCCCCccCccc
Confidence 888999999999999999999988899999999999999888 8999999999999999999999999999999999999
Q ss_pred cccccCCcCccCCCCCCCcccccccCCCCCCC
Q 013894 399 WYRSVQRLPMNVADNTYDPLFPLGFGLTYKKE 430 (434)
Q Consensus 399 ~p~~~~~~p~~~~~~~~~~~ypFG~GLsYt~~ 430 (434)
||++.+|+|.++|||+|+|+||||||||||+.
T Consensus 571 ~p~~~~~~p~~~g~~~~~plypFG~GLSYt~~ 602 (602)
T 1x38_A 571 WFKSVDQLPMNVGDAHYDPLFRLGYGLTTNAT 602 (602)
T ss_dssp BCSCGGGCSCCTTCSSCCCSBCTTCCBCCCCC
T ss_pred ccCccccCCccCCCCCCCccCcCCCCcCCCCC
Confidence 99999999999999999999999999999863
No 2
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=3e-96 Score=787.21 Aligned_cols=413 Identities=41% Similarity=0.714 Sum_probs=360.7
Q ss_pred ccCCCCCCCCCCCcccccC--C---------CceeeeecccccCCCCcCCCcccCCCCCHHHHHHhchHHHHHHHHcCCC
Q 013894 7 GLQGRPPKEHPKGYPYVAG--R---------NNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCISQGVC 75 (434)
Q Consensus 7 g~qg~~~~~~~~g~a~~~G--~---------~gv~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~~i~~g~~ 75 (434)
+|..||..+.+++.+|++| + .||++|+|||||||+++.++|..++.+++++|+|+||+||+++|++|+.
T Consensus 177 sfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~~~r~~~~~~vs~~~L~e~~L~PF~~aI~ag~~ 256 (822)
T 3rrx_A 177 SYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTERGVDRGNTLIDEKGLRDIHSAGYFSAINQGVQ 256 (822)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBGGGCTTCEECCCHHHHHHTTSHHHHHHHHTTCS
T ss_pred CCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccccCccCccCcCCHHHHHHHhhHHHHHHHHcCCC
Confidence 3444444444444555555 2 4999999999999998888888888899999999999999999999999
Q ss_pred ceeecccCCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHH
Q 013894 76 TIMASYSSWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFED 155 (434)
Q Consensus 76 ~vM~sy~~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~ 155 (434)
+|||||+.+||+|+|.|+++|++|||+||||+|+|||||++|..+... ..+++++|++||+||+|.+.++..+++.
T Consensus 257 sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~~----~~ea~~~Al~AG~Dm~m~~~~~~~~~~~ 332 (822)
T 3rrx_A 257 SVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEGC----DLEQCAQAINAGVDVIMVPEHFEAFYHN 332 (822)
T ss_dssp EEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTTC----BTTBCHHHHHHTCCBEECTTTHHHHHHH
T ss_pred EEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcCC----hHHHHHHHHHcCCCEECCCccHHHHHHH
Confidence 999999999999999999999999999999999999999999887543 2345789999999999998777777889
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcc----hhhhhcchhHHHHHHHHHhccEEEcccCCCCCCCcc
Q 013894 156 LTYLVESGKVPMSRIDDAVERILRVKFVAGLFEYPFSDKS----LLNIVGCKLHRELAREAVRKSLVLLKNGKKPEKPFL 231 (434)
Q Consensus 156 l~~av~~g~~~~~~id~a~~ril~~k~~~gl~~~p~~~~~----~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~L 231 (434)
|.+||++|+++++|||+||+|||++|+++|+||+|+.... ....+++++|+++++++|++||||||| ++++|
T Consensus 333 l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd~p~~~~~~~~~~~~~v~~~eh~~lAre~A~eSiVLLKN----~~~~L 408 (822)
T 3rrx_A 333 TVKQVKAGVIAESRINDAVRRFLRAKIRWGVFTKSKPSARPESQHPQWLGAAEHRTLAREAVRKSLVLLKN----NESIL 408 (822)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTTSCCGGGSGGGSCGGGTTCHHHHHHHHHHHHHHCEEEEE----GGGCC
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCcccccccccccccCCHHHHHHHHHHHHhceEEEec----CCCcc
Confidence 9999999999999999999999999999999999875421 124688999999999999999999999 67899
Q ss_pred CCCCCCCeEEEEeeccccccccCCCCceeccCCC-C--CccccCCHHHHHHhHcCC-CcEEEEccCCChhhhhcCCCceE
Q 013894 232 PLDRNAKRILVVGTHADDLGYQCGGWTKTWFGMS-G--KITIGTTILEAVKEAVGD-ETEVIYEKYPSPDTFVAGDFSFA 307 (434)
Q Consensus 232 PL~~~~~kIavig~~a~~~~~~~g~~~~~~~g~~-g--~~~~~~t~~~~l~~~~~~-~~~v~~~~~~~~~~~~a~~ad~~ 307 (434)
||++. +||+|+||+|++...++|+|+..|+|.. + .+++..|++++|++++.. ...+.|.... ..++.+|++
T Consensus 409 PL~~~-~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~~~----~~a~~aDv~ 483 (822)
T 3rrx_A 409 PIKAS-SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSESG----EYTSKPDVA 483 (822)
T ss_dssp SBCTT-SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECTTC----CCSSCCSEE
T ss_pred CCCCC-CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEcccc----cccccCCeE
Confidence 99865 7999999999998889999999887643 2 245678999999987642 2356664322 135789999
Q ss_pred EEEeeCCCCccccCCCCCccCC---cchHHHHHHHHc-CCCeEEEEEcCCceecCccccCCCcEEEEccCCCchHHHHHH
Q 013894 308 IAAVGEEPYAETLGDNSELIIP---LNGGDVISLVAE-RIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSEGSGIAD 383 (434)
Q Consensus 308 iv~~g~~~~~~~~gd~~~l~l~---~~q~~li~~v~~-~~~~vvV~~~g~P~~l~~~~~~~~~ail~a~~~g~~~~aiad 383 (434)
||++|+.++.|.+|||.+|.|| ..|.+||+++++ ++|+|||+++|+|+.+.+| .++++|||++|+||++|.|+||
T Consensus 484 Iv~~Ge~~~~e~~gDr~~L~lp~g~~~q~~Li~av~a~g~pvVvVl~sGrP~~l~~~-~~~~~Ail~aw~pG~eGgAiAd 562 (822)
T 3rrx_A 484 IVVIGEEPYAEWFGDIELLEFQHETKHALALLKQLKADNIPVVTVFLSGRPLWVNKE-LNASDAFVAAWLPGSEGEGVAD 562 (822)
T ss_dssp EEEEECCCCCGGGGCCSCCBTTTTTCHHHHHHHHHHHTTCCEEEEEECSSCCBCHHH-HHTCSEEEEEECCCSBTHHHHH
T ss_pred EEEecCCcccccCCCcccccCCCCChHHHHHHHHHHHhCCCEEEEEeCCcceeccch-hhhCCeEEEcCCCCchhHHHHH
Confidence 9999999988888999999999 579999999987 8999999999999999888 8899999999999999669999
Q ss_pred HHhcCC------CCCcccccccccccCCcCccCCCCCCCcccccccCCCCCCCCCC
Q 013894 384 VVFGDH------DFTGRLPVTWYRSVQRLPMNVADNTYDPLFPLGFGLTYKKEKSL 433 (434)
Q Consensus 384 vL~G~~------~PsGkLPvT~p~~~~~~p~~~~~~~~~~~ypFG~GLsYt~~~~~ 433 (434)
||||++ |||||||+|||++.+|+|.++++..|+|+||||||||||+|+++
T Consensus 563 VLfG~v~g~~~~nPSGkLP~T~P~~~~q~P~~~~~~~~~PlypFG~GLSYt~f~~~ 618 (822)
T 3rrx_A 563 VLLTNKQGKTQFDFTGKLSFSWPKYDDQFTLNLNDADYDPLFAYGYGLTYQDNINV 618 (822)
T ss_dssp HHBBCTTSCBSCCCCCCCSSCBCSSTTCTTCCTTCSSCCCSBCTTCCBCTTCCCCC
T ss_pred HHhcccccccccCCCCCCceeccCCcccCCcccCCCCCccccCCCCCcCCCCCccc
Confidence 999997 99999999999999999999999999999999999999999986
No 3
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.7e-90 Score=751.90 Aligned_cols=400 Identities=26% Similarity=0.376 Sum_probs=336.7
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCCCCHHHHHHhchHHHHHHHH-cCCCceeeccc
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCIS-QGVCTIMASYS 82 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~~i~-~g~~~vM~sy~ 82 (434)
++|..||..+.+++.+|++| ++||++|+|||||||++.. ++..++.+++++|+|+||+||+++|+ +|+.+||||||
T Consensus 116 EsfgeDP~lv~~~a~a~v~GlQ~~gV~a~~KHFpg~g~e~~-r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn 194 (845)
T 3abz_A 116 ESFSEDPYLAGMATSSVVKGMQGEGIAATVKHFVCNDLEDQ-RFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYN 194 (845)
T ss_dssp GSCCSSHHHHHHHHHHHHHHHHHTTCBCEEEEETTCCCCTT-TTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSS
T ss_pred ccCCCCHHHHHHHHHHHHHHHhhCCeeEEeeccccCCcccC-CccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCC
Confidence 46777777777888999999 7899999999999998654 46666778999999999999999996 89999999999
Q ss_pred CCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHHHHHHHHC
Q 013894 83 SWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLTYLVES 162 (434)
Q Consensus 83 ~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~av~~ 162 (434)
.+||.|+|+|+++|++|||+||||+|+|||||++|. ++++|++||+||+|.+.......+.|.+||++
T Consensus 195 ~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~ 262 (845)
T 3abz_A 195 KVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNS 262 (845)
T ss_dssp EETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHT
T ss_pred CcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHc
Confidence 999999999999999999999999999999998863 24789999999999743211122489999999
Q ss_pred CC-CCHHHHHHHHHHHHHHHHHcC----CCCCCCCCcchhhhhcchhHHHHHHHHHhccEEEcccCCCCCCCccCCCCCC
Q 013894 163 GK-VPMSRIDDAVERILRVKFVAG----LFEYPFSDKSLLNIVGCKLHRELAREAVRKSLVLLKNGKKPEKPFLPLDRNA 237 (434)
Q Consensus 163 g~-~~~~~id~a~~ril~~k~~~g----l~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~LPL~~~~ 237 (434)
|. +++++||+|++|||++|+++| +|++|+.+.. ...+++++|+++++++|++||||||| ++++|||++ .
T Consensus 263 G~~i~~~~id~av~RIL~~k~~~g~l~~~~~~p~~~~~-~~~~~~~~~~~la~~~a~~sivLLKN----~~~~LPL~~-~ 336 (845)
T 3abz_A 263 REQITTEDVDDRVRQVLKMIKFVVDNLEKTGIVENGPE-STSNNTKETSDLLRKIAADSIVLLKN----KNNILPLKK-E 336 (845)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHHTHHHHCCCTTCCC-CCTTCSHHHHHHHHHHHHHHCEEEEE----CTTCCSCCT-T
T ss_pred CccchHHHHHHHHHHHHHHHHHhCCccccccCCccCcc-ccccCCHHHHHHHHHHHHhCcEEecc----CCcccCCCC-C
Confidence 99 999999999999999999999 9998875432 23478999999999999999999999 678999986 4
Q ss_pred CeEEEEeeccccccccCCCCceeccCCCCCccccCCHHHHHHhHcCCCc-------------------------------
Q 013894 238 KRILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEAVGDET------------------------------- 286 (434)
Q Consensus 238 ~kIavig~~a~~~~~~~g~~~~~~~g~~g~~~~~~t~~~~l~~~~~~~~------------------------------- 286 (434)
+||+|+||+|+....+.|+++ ...+.+..|++++|+++++...
T Consensus 337 ~~iaviGp~A~~~~~~Gggs~------~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~ 410 (845)
T 3abz_A 337 DNIIVIGPNAKAKTSSGGGSA------SMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAEN 410 (845)
T ss_dssp SCEEEESTTTSCCCCSCBSTT------CCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTT
T ss_pred CEEEEEcCCcchhhccCCCcc------CcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCC
Confidence 799999999998764433322 1234567899999987642100
Q ss_pred ---E----------------------------------------------------------------------------
Q 013894 287 ---E---------------------------------------------------------------------------- 287 (434)
Q Consensus 287 ---~---------------------------------------------------------------------------- 287 (434)
.
T Consensus 411 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~id 490 (845)
T 3abz_A 411 SGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLN 490 (845)
T ss_dssp BSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEET
T ss_pred CceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEEC
Confidence 0
Q ss_pred ----------------------------------------EEEccC---------------------CCh------hhhh
Q 013894 288 ----------------------------------------VIYEKY---------------------PSP------DTFV 300 (434)
Q Consensus 288 ----------------------------------------v~~~~~---------------------~~~------~~~~ 300 (434)
+.|... .+. +...
T Consensus 491 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~ 570 (845)
T 3abz_A 491 DELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAEL 570 (845)
T ss_dssp TEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHH
T ss_pred CEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHH
Confidence 000000 000 0122
Q ss_pred cCCCceEEEEeeCCCCccccC-CCCCccCCcchHHHHHHHHc-CCCeEEEEEcCCceecCccccCCCcEEEEccCCCch-
Q 013894 301 AGDFSFAIAAVGEEPYAETLG-DNSELIIPLNGGDVISLVAE-RIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSE- 377 (434)
Q Consensus 301 a~~ad~~iv~~g~~~~~~~~g-d~~~l~l~~~q~~li~~v~~-~~~~vvV~~~g~P~~l~~~~~~~~~ail~a~~~g~~- 377 (434)
|+.+|++||++|.++..+.|| ||.+|.||+.|.+||++|++ ++|+|||+++|+|+.| +| .++++|||++|+|||+
T Consensus 571 A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~~~~tVVVl~sG~pv~m-~w-~~~v~AIL~aw~pGqeg 648 (845)
T 3abz_A 571 AAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKANPNTVIVNQSGTPVEF-PW-LEDANALVQAWYGGNEL 648 (845)
T ss_dssp HHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHHCSCEEEEEECSSCCCC-TT-GGGCSEEEECCCCCTTH
T ss_pred HhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHhCCCEEEEEeCCCcccC-cc-hhccCeEEEcCCCcHHH
Confidence 678999999999999888888 99999999999999999998 9999999999999999 78 7899999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccccccccCCcCcc-----------------CCCCCC-----CcccccccCCCCCCCCC
Q 013894 378 GSGIADVVFGDHDFTGRLPVTWYRSVQRLPMN-----------------VADNTY-----DPLFPLGFGLTYKKEKS 432 (434)
Q Consensus 378 ~~aiadvL~G~~~PsGkLPvT~p~~~~~~p~~-----------------~~~~~~-----~~~ypFG~GLsYt~~~~ 432 (434)
|+|+||||||++|||||||+|||++.+|+|.+ +||||| +|+||||||||||+|++
T Consensus 649 G~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~~~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~y 725 (845)
T 3abz_A 649 GNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFEL 725 (845)
T ss_dssp HHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTTSCSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEE
T ss_pred HHHHHHHhcCCcCCCCCCceeeeCchhhCCccccCCCCCCceeccCCccCCCcchhcCCCceeecccCCCcceeEEE
Confidence 99999999999999999999999999999863 357777 49999999999999964
No 4
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=2.7e-90 Score=740.26 Aligned_cols=407 Identities=26% Similarity=0.357 Sum_probs=335.7
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCCCCHHHHHHhchHHHHHHHHcCCCceeecccC
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCISQGVCTIMASYSS 83 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~vM~sy~~ 83 (434)
|+|..||..+.+++.+|++| +.||++|+|||||||++..+ +..+..+++++|+|+||+||+++|++|+.+||||||+
T Consensus 128 e~fgeDP~l~~~~a~a~v~Glq~~gV~a~~KHF~g~g~e~~r-~~~~~~v~~~~l~e~~l~pF~~ai~ag~~~VM~syn~ 206 (713)
T 3zyz_A 128 EGFGVDPYLTGIAMGQTINGIQSVGVQATAKHYILNEQELNR-ETISSNPDDRTLHELYTWPFADAVQANVASVMCSYNK 206 (713)
T ss_dssp GTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEETTCCCSTTT-TTCEECCCHHHHHHTTTHHHHHHHHTTCSEEEECSSE
T ss_pred ccccCCHHHHHHHHHHHHHHHhhCCeEEEEecCccCCccccC-ccccCcCCHHHHHHhhhHHHHHHHHcCCCeEEeeccc
Confidence 56777777777889999999 78999999999999987655 4456678999999999999999999999999999999
Q ss_pred CCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChH----HHHHHHHHH
Q 013894 84 WNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFD----QFFEDLTYL 159 (434)
Q Consensus 84 ~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~----~~~~~l~~a 159 (434)
+||.|+|+|+++|++|||+||||+|+|||||+++. ++++|++||+||+|++.++. .+.+.|.+|
T Consensus 207 vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~------------~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~a 274 (713)
T 3zyz_A 207 VNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH------------TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNA 274 (713)
T ss_dssp ETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC------------CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHH
T ss_pred cCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHH------------HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999752 35789999999999876432 234789999
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhhhcchhHHHHHHHHHhccEEEcccCCCCCCCccCCCCCCCe
Q 013894 160 VESGKVPMSRIDDAVERILRVKFVAGLFEYPFSDKSLLNIVGCKLHRELAREAVRKSLVLLKNGKKPEKPFLPLDRNAKR 239 (434)
Q Consensus 160 v~~g~~~~~~id~a~~ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~LPL~~~~~k 239 (434)
|++|.+++++||+|++|||++|+++|+||+|+...... ...+++|+++++++|++||||||| ++++|||++. +|
T Consensus 275 v~~G~i~~~~id~av~RIL~~k~~lg~~~~~~~~~~~~-~~~~~~h~~la~~~a~~sivLLKN----~~~~LPL~~~-~~ 348 (713)
T 3zyz_A 275 VNSNQVPTSRVDDMVTRILAAWYLTGQDQAGYPSFNIS-RNVQGNHKTNVRAIARDGIVLLKN----DANILPLKKP-AS 348 (713)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHTTTTSTTCCCCCTT-SCCCTTTHHHHHHHHHHTCEEEEE----GGGCCSCCCC-SE
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHhCCcccCCCCcccc-cccCHHHHHHHHHhhhcceEEEcc----CCCccccCCC-CE
Confidence 99999999999999999999999999998776543322 224789999999999999999999 6789999875 89
Q ss_pred EEEEeeccccccc------------cCCCCceeccCCCCCccccCCHHHHHHhHcC-CCcEEEEccCCCh--hhhhcCCC
Q 013894 240 ILVVGTHADDLGY------------QCGGWTKTWFGMSGKITIGTTILEAVKEAVG-DETEVIYEKYPSP--DTFVAGDF 304 (434)
Q Consensus 240 Iavig~~a~~~~~------------~~g~~~~~~~g~~g~~~~~~t~~~~l~~~~~-~~~~v~~~~~~~~--~~~~a~~a 304 (434)
|+|||++++.... ..+.+...|......+++..|++++|++++. ....+.+...... +...++.+
T Consensus 349 IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~~~~~~~a~~~A~~a 428 (713)
T 3zyz_A 349 IAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSNTDNTSSGASAARGK 428 (713)
T ss_dssp EEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEECSCCHHHHHHHHTTC
T ss_pred EEEECCCccccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeCCccHHHHHHHhhcC
Confidence 9999999975310 0011111111112234567899999998763 2445665543332 23457899
Q ss_pred ceEEEEeeCCCCcc------ccCCCCCccCCcchHHHHHHHHc-CCCeEEEEEcCCceecCccccC--CCcEEEEccCCC
Q 013894 305 SFAIAAVGEEPYAE------TLGDNSELIIPLNGGDVISLVAE-RIPTLAILVSGRPLVLEPQLLE--KADALVAAWLPG 375 (434)
Q Consensus 305 d~~iv~~g~~~~~~------~~gd~~~l~l~~~q~~li~~v~~-~~~~vvV~~~g~P~~l~~~~~~--~~~ail~a~~~g 375 (434)
|++||++|...... ..|||.+|.||..|.+||++|++ ++|+|||+++|+|+.|.+| .+ +++|||++|+||
T Consensus 429 Dv~Iv~vg~~~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~~~~~VVVl~sG~p~~~~~w-~~~~~v~Ail~aw~pG 507 (713)
T 3zyz_A 429 DVAIVFITADSGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGANSNVIVVVHSVGAIILEQI-LALPQVKAVVWAGLPS 507 (713)
T ss_dssp SEEEEEEEECCBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHHCSCEEEEEEESSCCCCHHH-HTCTTEEEEEECCCCG
T ss_pred CEEEEEecccCCCCccccccCCCCcccccCChhHHHHHHHHHHhCCCeEEEEecCCcccchhh-hhccccCEEEEcCCCC
Confidence 99999998653211 12499999999999999999998 8999999999999999888 44 799999999999
Q ss_pred ch-HHHHHHHHhcCCCCCcccccccccccCCcCcc--------------CCCCCC-----CcccccccCCCCCCCCC
Q 013894 376 SE-GSGIADVVFGDHDFTGRLPVTWYRSVQRLPMN--------------VADNTY-----DPLFPLGFGLTYKKEKS 432 (434)
Q Consensus 376 ~~-~~aiadvL~G~~~PsGkLPvT~p~~~~~~p~~--------------~~~~~~-----~~~ypFG~GLsYt~~~~ 432 (434)
|+ |+|+||||||++|||||||+|||++.+|+|.+ ++|||| +|+||||||||||+|++
T Consensus 508 qegG~AiAdvL~G~~nPSGkLP~T~p~~~~d~p~~~~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~y 584 (713)
T 3zyz_A 508 QESGNALVDVLWGDVSPSGKLVYTIAKSPNDYNTRIVSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNY 584 (713)
T ss_dssp GGHHHHHHHHHTTSSCCCCCCSSCBCSCGGGSSCCCCCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEE
T ss_pred chhhheehhhhcCCcCCCccCcceecCChhhCCCccccCCccccCCCCccCceeccCCCCceeecCCCCCCcccEEE
Confidence 99 99999999999999999999999999999852 346776 58999999999999964
No 5
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=1.8e-88 Score=729.96 Aligned_cols=394 Identities=26% Similarity=0.395 Sum_probs=331.4
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCCCCHHHHHHhchHHHHHHHH-cCCCceeeccc
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCIS-QGVCTIMASYS 82 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~~i~-~g~~~vM~sy~ 82 (434)
++|..||..+.+++.+|++| ++||++|+|||||||++..+ +..++.+++++|+|+||+||+++|+ +|+.+|||||+
T Consensus 133 e~fgeDP~l~~~~a~a~v~G~q~~gV~a~~KHF~g~g~e~~r-~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~ 211 (721)
T 2x41_A 133 EYYSEDPVLSGEMASSFVKGVQSQGVGACIKHFVANNQETNR-MVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYN 211 (721)
T ss_dssp GSCCSSHHHHHHHHHHHHHHHHTTTCBCEEEEETTCCCCTTT-TTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSS
T ss_pred ccCCCCHHHHHHHHHHHHHHhhhCCeEEEecccccCCCCCCC-CcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCC
Confidence 45777777777889999999 88999999999999976544 4556668999999999999999998 88999999999
Q ss_pred CCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChH------HHHHHH
Q 013894 83 SWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFD------QFFEDL 156 (434)
Q Consensus 83 ~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~------~~~~~l 156 (434)
.+||.|+|+|+++|++|||+||||+|+|||||+++. ++++|++||+||+|++.... ..++.|
T Consensus 212 ~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l 279 (721)
T 2x41_A 212 KLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGD------------NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEI 279 (721)
T ss_dssp EETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSS------------CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHH------------HHHHHHHcCCCcccCCCcccccchhHHHHHHH
Confidence 999999999999999999999999999999998863 36889999999999765322 245899
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhhhcchhHHHHHHHHHhccEEEcccCCCCCCCccCCCCC
Q 013894 157 TYLVESGKVPMSRIDDAVERILRVKFVAGLFEYPFSDKSLLNIVGCKLHRELAREAVRKSLVLLKNGKKPEKPFLPLDRN 236 (434)
Q Consensus 157 ~~av~~g~~~~~~id~a~~ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~LPL~~~ 236 (434)
.+||++|.+++++||+|++|||++|+++|+||+|+. ...+++++|+++++++|++||||||| ++ +|||++.
T Consensus 280 ~~av~~G~i~~~~id~av~Ril~~k~~~gl~~~~~~----~~~~~~~~h~~la~~~A~esiVLLKN----~~-~LPL~~~ 350 (721)
T 2x41_A 280 MEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRY----SNKPDLEKHAKVAYEAGAEGVVLLRN----EE-ALPLSEN 350 (721)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGGTCCC----CSCCCHHHHHHHHHHHHHHHCEEEEE----SS-CCSCCTT
T ss_pred HHHHHcCCccHHHHHHHHHHHHHHHHHhCCCCCCCc----ccccCCHHHHHHHHHHHHhchhhhcC----CC-cCCCCCC
Confidence 999999999999999999999999999999998752 23477899999999999999999999 66 9999875
Q ss_pred CCeEEEEeeccccccccCCCCceeccCCCCCccccCCHHHHHHhH-cCC--CcEEEEc-------------cC-------
Q 013894 237 AKRILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEA-VGD--ETEVIYE-------------KY------- 293 (434)
Q Consensus 237 ~~kIavig~~a~~~~~~~g~~~~~~~g~~g~~~~~~t~~~~l~~~-~~~--~~~v~~~-------------~~------- 293 (434)
+||+|+|++++....+++++. .....+..|++++|+++ +.. ...+.|. .+
T Consensus 351 -~kIaviG~~A~~~~~~g~gs~------~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~ 423 (721)
T 2x41_A 351 -SKIALFGTGQIETIKGGTGSG------DTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTI 423 (721)
T ss_dssp -CCEEEESGGGTSCCCSCBSTT------CCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----C
T ss_pred -CEEEEEecCCcCccccCCCCC------CcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceecc
Confidence 899999999987653322211 12345668999999987 431 1123332 11
Q ss_pred ----C-------ChhhhhcCCCceEEEEeeCCCCccccC-CCC----CccCCcchHHHHHHHH----c-CCCeEEEEEcC
Q 013894 294 ----P-------SPDTFVAGDFSFAIAAVGEEPYAETLG-DNS----ELIIPLNGGDVISLVA----E-RIPTLAILVSG 352 (434)
Q Consensus 294 ----~-------~~~~~~a~~ad~~iv~~g~~~~~~~~g-d~~----~l~l~~~q~~li~~v~----~-~~~~vvV~~~g 352 (434)
. ......++.+|++||++|.. +.|+ ||. ++.||..|.+||++++ + ++|+|||+++|
T Consensus 424 ~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~~~~vVVVl~~g 500 (721)
T 2x41_A 424 IKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIG 500 (721)
T ss_dssp BCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred ccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecC
Confidence 0 11123357899999999987 3444 998 9999999999999998 6 88899999999
Q ss_pred CceecCccccCCCcEEEEccCCCch-HHHHHHHHhcCCCCCcccccccccccCCcCcc--------------------CC
Q 013894 353 RPLVLEPQLLEKADALVAAWLPGSE-GSGIADVVFGDHDFTGRLPVTWYRSVQRLPMN--------------------VA 411 (434)
Q Consensus 353 ~P~~l~~~~~~~~~ail~a~~~g~~-~~aiadvL~G~~~PsGkLPvT~p~~~~~~p~~--------------------~~ 411 (434)
+|++|.+| .++++|||++|+||++ ++|+||||||++||+||||+|||++.+|+|.+ +|
T Consensus 501 ~P~~l~~~-~~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~p~~~~~~p~~~~~~~~~~~~~~~~y~eg~~vg 579 (721)
T 2x41_A 501 SPVEVVSW-RDLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTFPRDYSDVPSWTFPGEPKDNPQKVVYEEDIYVG 579 (721)
T ss_dssp SCCCCTTT-GGGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCEESSGGGCSCTTTTCBSTTSCSEEECTTTTCCT
T ss_pred CceEccch-hhcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceeecCccccCccccCCCCCccccccccccCCcccc
Confidence 99999889 8999999999999999 99999999999999999999999999998761 25
Q ss_pred CCCC-----CcccccccCCCCCCCCC
Q 013894 412 DNTY-----DPLFPLGFGLTYKKEKS 432 (434)
Q Consensus 412 ~~~~-----~~~ypFG~GLsYt~~~~ 432 (434)
|||| +|+||||||||||+|++
T Consensus 580 Yry~d~~~~~plypFG~GLSYTtF~y 605 (721)
T 2x41_A 580 YRYYDTFGVEPAYEFGYGLSYTTFEY 605 (721)
T ss_dssp HHHHHHHTCCEEECTTCCBCSSCEEE
T ss_pred cceeecCCCceeeccCCCCCcceeEe
Confidence 6777 48999999999999964
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=5.4e-81 Score=663.46 Aligned_cols=385 Identities=21% Similarity=0.359 Sum_probs=314.9
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCC--CCHHHHHHhchHHHHHHHHcCCCceeec-
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTI--STYDDLEKIHMAPYLDCISQGVCTIMAS- 80 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~--~~~~~l~e~~l~PF~~~i~~g~~~vM~s- 80 (434)
|.|..||..+.+++.+|++| +.||++|+|||||||++..|+|...+. +++++|+|+||+||+++|++|+.+||||
T Consensus 191 rsfgeDP~lv~~~a~a~v~Glq~~gV~a~~KHFpg~g~~~~dsh~~~~~~~~~~~~l~e~~l~PF~~ai~ag~~~VM~ah 270 (642)
T 3bmx_A 191 RSFSSNRELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGADMVMTAH 270 (642)
T ss_dssp GSSCSSHHHHHHHHHHHHHHHHHTTCEEEEEEETCCTTCSSCTTTSCCBCCCCHHHHHHTTHHHHHHHHHTTCCEEEECC
T ss_pred cccCCCHHHHHHHHHHHHHHHHhCCceEEeccccCCCCccCCCCCCCceeccCHHHHhhhhHHHHHHHHHcCCCEEEEcc
Confidence 67777887788899999999 789999999999999998888876543 5999999999999999999999999999
Q ss_pred --ccCCC-------------CccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecC
Q 013894 81 --YSSWN-------------GRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMV 145 (434)
Q Consensus 81 --y~~~~-------------g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~ 145 (434)
|+.+| |.|+|+|+++|++|||+||||+|+|||||++|+++...+ +..+++++|++||+||+|+
T Consensus 271 ~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~m~ai~~~~--~~~~a~~~Al~AG~D~~l~ 348 (642)
T 3bmx_A 271 VQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHF--GQEEAVVMAVKAGVDIALM 348 (642)
T ss_dssp CBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTTS--CHHHHHHHHHHHTCSBEES
T ss_pred ccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchhhHHHHhcC--CHHHHHHHHHHcCCCEecc
Confidence 56777 789999999999999999999999999999999998754 4578889999999999988
Q ss_pred CCC---------hHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCC-CCCCcc-----hhhhhcchhHHHHHH
Q 013894 146 PHR---------FDQFFEDLTYLVESGKVPMSRIDDAVERILRVKFVAGLFEY-PFSDKS-----LLNIVGCKLHRELAR 210 (434)
Q Consensus 146 ~~~---------~~~~~~~l~~av~~g~~~~~~id~a~~ril~~k~~~gl~~~-p~~~~~-----~~~~~~~~~~~~la~ 210 (434)
|.. ...+++.|.+||++|+++++|||+|++|||++|+++|+|++ |+.+.. ....+++++|+++++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~~~la~ 428 (642)
T 3bmx_A 349 PASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEK 428 (642)
T ss_dssp CSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCSSCCCCCCHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHcCCCcCCCCcccccchhhhhhhcCCHHHHHHHH
Confidence 731 24567899999999999999999999999999999999998 876521 134688999999999
Q ss_pred HHHhccEEEcccCCCCCCCccCCCC-CCCeEEEEeeccccccccCCCCceeccCCCCCccccCCHHHHHHhHcCC--Cc-
Q 013894 211 EAVRKSLVLLKNGKKPEKPFLPLDR-NAKRILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEAVGD--ET- 286 (434)
Q Consensus 211 ~~a~~sivLLKN~~~~~~~~LPL~~-~~~kIavig~~a~~~~~~~g~~~~~~~g~~g~~~~~~t~~~~l~~~~~~--~~- 286 (434)
++|++||||||| ++++|||++ +.+||+|+|++++. ..+++++|+++.+. ..
T Consensus 429 ~~a~~sivLLKN----~~~~LPL~~~~~~~iaviG~~~~~---------------------~~~~~~~l~~~~~~~~~~~ 483 (642)
T 3bmx_A 429 KLAEKAVTVLKN----EQHTLPFKPKKGSRILIVAPYEEQ---------------------TASIEQTIHDLIKRKKIKP 483 (642)
T ss_dssp HHHHHHCEEEEE----GGGCCSCCCCTTCEEEEEESSHHH---------------------HHHHHHHHHHHHHTTSSCC
T ss_pred HHHHhCEEEEcc----CCCcCCCCCCCCCEEEEEeCCccc---------------------hhhHHHHHHHhhCCCCeeE
Confidence 999999999999 678999984 45799999986432 24788899887521 11
Q ss_pred --EEEEccCC----ChhhhhcCCCceEEEEeeCCCCccccCCCCCccCCcch------------HHHHHHHHc-CCCeEE
Q 013894 287 --EVIYEKYP----SPDTFVAGDFSFAIAAVGEEPYAETLGDNSELIIPLNG------------GDVISLVAE-RIPTLA 347 (434)
Q Consensus 287 --~v~~~~~~----~~~~~~a~~ad~~iv~~g~~~~~~~~gd~~~l~l~~~q------------~~li~~v~~-~~~~vv 347 (434)
...+.... ......++.+|++|++++....... ..+.+|..| .+||+++++ ++|+|
T Consensus 484 ~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~----e~~~l~~~q~~~~~~~~~~~~~~li~~~~~~~~pvV- 558 (642)
T 3bmx_A 484 VSLSKMNFASQVFKTEHEKQVKEADYIITGSYVVKNDPV----VNDGVIDDTISDSSKWATVFPRAVMKAALQHNKPFV- 558 (642)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCC----EETTEECCCCCSSTTHHHHHHHHHHHHHHHTTCCEE-
T ss_pred EeccCCCCcchhhHHHHHHHHhhCCEEEEEecCCCCCch----hccCCccccccccccccchhHHHHHHHHHHcCCCEE-
Confidence 11121111 1122346789999996654311111 134566677 899999987 55555
Q ss_pred EEEcCCceecCccccCCCcEEEEccCC--------Cch-HHHHHHHHhcCCCCCcccccccccccCCcCccCCCCCCCcc
Q 013894 348 ILVSGRPLVLEPQLLEKADALVAAWLP--------GSE-GSGIADVVFGDHDFTGRLPVTWYRSVQRLPMNVADNTYDPL 418 (434)
Q Consensus 348 V~~~g~P~~l~~~~~~~~~ail~a~~~--------g~~-~~aiadvL~G~~~PsGkLPvT~p~~~~~~p~~~~~~~~~~~ 418 (434)
|+.+|+||++. | .++++|||++|++ |++ ++|+||||||++||+||||+|||++. .| .+|+
T Consensus 559 vv~~g~P~~l~-~-~~~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~nPsGkLPvt~p~~~--~~-------~~pl 627 (642)
T 3bmx_A 559 LMSLRNPYDAA-N-FEEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDIPSVT--KP-------GNTL 627 (642)
T ss_dssp EEECSCGGGGG-G-CTTCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSCCCCCCSSCEECSS--ST-------TSEE
T ss_pred EEecCChhccc-c-ccccCeEEEEccCcccccccccchHHHHHHHHHcCCCCCCccCceeeeccC--CC-------CCcc
Confidence 45679999995 5 5679999999999 788 99999999999999999999999987 22 3699
Q ss_pred cccccCCCCCCCCCC
Q 013894 419 FPLGFGLTYKKEKSL 433 (434)
Q Consensus 419 ypFG~GLsYt~~~~~ 433 (434)
||||||||||+|++|
T Consensus 628 fpfG~GLsYt~~~~~ 642 (642)
T 3bmx_A 628 YPLGYGLNIKTGRPL 642 (642)
T ss_dssp ECTTCCBCTTTCSBC
T ss_pred cCCCCCccCCCCCCC
Confidence 999999999999875
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=2e-57 Score=466.97 Aligned_cols=342 Identities=18% Similarity=0.207 Sum_probs=267.4
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCC--CCHHHHHHhchHHHHHHHHcCCCceeecc
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTI--STYDDLEKIHMAPYLDCISQGVCTIMASY 81 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~--~~~~~l~e~~l~PF~~~i~~g~~~vM~sy 81 (434)
|+|..||..+++++.+|++| +.||++|+|||||||.+..|+|...+. +++++|+|.||+||+++|++|+.+|||||
T Consensus 165 rsfGEDP~lv~~~a~A~v~GlQ~~gV~a~~KHFpG~G~~~~Dsh~~~~~v~~s~~~L~e~~L~PF~~aI~ag~~sVM~ah 244 (535)
T 3sql_A 165 RAFGETPDQVSALGTAFIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKAAIQGGVDAVMNAH 244 (535)
T ss_dssp GSSCSSHHHHHHHHHHHHHHHTTSSCBCEEEEETCCCSCSCCTTTSCCBCCCCHHHHHHTTSHHHHHHHHTTCSEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHHHhhcccceeeeeecccCCcccCCccCCCcCCCCHHHHHHHHHHHHHHHHHcCCCEEEecC
Confidence 67778888888899999999 789999999999999999988876554 58999999999999999999999999999
Q ss_pred cCCCC----ccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHHHH
Q 013894 82 SSWNG----RKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLT 157 (434)
Q Consensus 82 ~~~~g----~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~ 157 (434)
+.+|+ .|+|+|+++|+++||+||||+|+|||||++|+++...+ +..+++++|++||+||+|+|.+....++.|.
T Consensus 245 ~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~~--~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~ 322 (535)
T 3sql_A 245 LMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQFA--APDTVVVQAIAAGADILLMPPDVDGAIIAIE 322 (535)
T ss_dssp CBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTTS--CHHHHHHHHHHHTCSBEESCSCHHHHHHHHH
T ss_pred ccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhcC--CHHHHHHHHHHCCCCeecCCCCHHHHHHHHH
Confidence 87764 79999999999999999999999999999999998755 4578899999999999999988777889999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhhhcchhHHHHHHHHHhccEEEcccCCCCCCCccCCC---
Q 013894 158 YLVESGKVPMSRIDDAVERILRVKFVAGLFEYPFSDKSLLNIVGCKLHRELAREAVRKSLVLLKNGKKPEKPFLPLD--- 234 (434)
Q Consensus 158 ~av~~g~~~~~~id~a~~ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~LPL~--- 234 (434)
+||++|.++++|||+|++|||++|+++|+|++|+... ...+++++|+++++++|++|||| | ++|||+
T Consensus 323 ~AV~~G~i~e~rId~av~RIL~~K~~lGl~~~~~~~~--~~~~~~~eh~~lA~e~A~eSiVL--~------~~LPL~~~~ 392 (535)
T 3sql_A 323 TAIKTGQLSESRIYESVERIWQAKQKILTATPSTFPQ--GISGDRPETRKTVAMVLERATKH--Q------KSLVKISSF 392 (535)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHHHTSCCCCTTT--TCCTTCHHHHHHHHHHHHHHCEE--C------SSCCCCCCC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCccch--hhccCCHHHHHHHHHHHHhCeEE--C------CcCCCCccc
Confidence 9999999999999999999999999999998765432 24788999999999999999999 5 389998
Q ss_pred --CCCCeEEEEeeccccccccCCCCceeccCCCCCccccCCHHHHHHhHcCCCcEEEEccCCChhhhh-cCCCceEEEEe
Q 013894 235 --RNAKRILVVGTHADDLGYQCGGWTKTWFGMSGKITIGTTILEAVKEAVGDETEVIYEKYPSPDTFV-AGDFSFAIAAV 311 (434)
Q Consensus 235 --~~~~kIavig~~a~~~~~~~g~~~~~~~g~~g~~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~-a~~ad~~iv~~ 311 (434)
++.++|+|||++++...+. |..+...+| +.. ...+.+.+........ ....-...+++
T Consensus 393 ~~~~~~~laVIG~~a~~~~~~------------g~~~~~~~P-----~~~--G~~~~~~~~~~~~~~~~~~~~~~~q~f~ 453 (535)
T 3sql_A 393 PDNFARNLIVVDSVLKSPFLR------------PNCPAIAIP-----QRH--GYAAEIVELKTLPRLQLEAIPTLIQCFL 453 (535)
T ss_dssp STTSEEEEEEESCGGGCTTCC------------TTCHHHHHH-----HTT--TEEEEEEETTTGGGBCCCSSCEEEEEEE
T ss_pred ccCCCCEEEEECCCCCCcccC------------CCCCcccCH-----HHc--CceEEEEcCccccccccCCCCeEEEEee
Confidence 2357999999998764321 111111122 122 2344443322211111 12233566677
Q ss_pred eCCCCccccCCCCCccCCcchHHHHHHHHcCCCeEEEEEcCCceecCccccCCCcEEEEccCCCch--HHHH-HHHHhcC
Q 013894 312 GEEPYAETLGDNSELIIPLNGGDVISLVAERIPTLAILVSGRPLVLEPQLLEKADALVAAWLPGSE--GSGI-ADVVFGD 388 (434)
Q Consensus 312 g~~~~~~~~gd~~~l~l~~~q~~li~~v~~~~~~vvV~~~g~P~~l~~~~~~~~~ail~a~~~g~~--~~ai-advL~G~ 388 (434)
-.+|+....+ |. ..+++++.+....--+++.|+||.+.++ .+..+.|-++|.+||. .|++ .+.||+.
T Consensus 454 r~~~f~~~~~-------~~--~~~~~~l~~~~~~~~~~~yg~py~~~~~-~~~~~~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 454 RGNPFTEKLA-------DP--IDVLQKIAAQIPLQGVIFYGSPYFLEAL-QTTLPEIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp CCCSSCSSCC-------CC--HHHHHHHHHHSCEEEEEEEECCTTHHHH-HHHCTTSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred cCCCCCCCcc-------hH--HHHHHHHHhcCceeEEEEeCChhHHHHH-HHHhhcCCcccCCccCHHHHHHHHHHHhcc
Confidence 6677655443 22 4678888774455555556999999766 4555578899999997 6664 4677773
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=1.2e-44 Score=356.27 Aligned_cols=184 Identities=21% Similarity=0.302 Sum_probs=160.6
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCC--CCCHHHHHHhchHHHHHHHHcCCCceeec-
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNT--ISTYDDLEKIHMAPYLDCISQGVCTIMAS- 80 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~--~~~~~~l~e~~l~PF~~~i~~g~~~vM~s- 80 (434)
|.|..||..+.+++.+|++| +.||++|+|||||||++..|+|...+ .+++++|+|.||+||+++ ++|+.+||||
T Consensus 148 RsfgeDP~lv~~~a~a~v~Glq~~gV~a~~KHFpG~g~~~~dsh~~~~~~~~s~~~L~e~~l~PF~~a-~ag~~~VM~aH 226 (351)
T 3tev_A 148 RAYGSDAARVTRHGRAALAGHTREGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRAL-LPETPAIMTAH 226 (351)
T ss_dssp GSSCSSHHHHHHHHHHHHHHHHTTTCEECEEEETCCTTCBCSSTTSCCEECCCHHHHHHTTTHHHHHH-GGGCSEEEECS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeEEeeeccCCCCCcCCCCcCCCcCCCCHHHHHHhhhHHHHHH-hcCCCEEEecc
Confidence 67888888888899999999 88999999999999999988887654 469999999999999999 9999999999
Q ss_pred --ccCCCC-ccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChH---HHHH
Q 013894 81 --YSSWNG-RKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFD---QFFE 154 (434)
Q Consensus 81 --y~~~~g-~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~---~~~~ 154 (434)
|+.+|+ .|+|+|+++|++|||+||||+|+|||||++|.++...++ ..+++++|++||+||+|+|++.. .+.+
T Consensus 227 i~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~~--~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~ 304 (351)
T 3tev_A 227 IVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANYG--RGEAAVRALRAGADLVMALGRREVQQATLA 304 (351)
T ss_dssp CEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHSC--HHHHHHHHHHHTCSBEECCSSHHHHHHHHH
T ss_pred eEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcCC--HHHHHHHHHHcCCCEECCCCChhHHHHHHH
Confidence 788998 699999999999999999999999999999999876554 46788999999999999987754 3568
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcc
Q 013894 155 DLTYLVESGKVPMSRIDDAVERILRVKFVAGLFEYPFSDKS 195 (434)
Q Consensus 155 ~l~~av~~g~~~~~~id~a~~ril~~k~~~gl~~~p~~~~~ 195 (434)
.|.++|++ ++++||+|++|||++|+++|+|++||.++.
T Consensus 305 ~l~~av~~---~~~~id~av~RIL~~k~~~g~f~~Py~~~~ 342 (351)
T 3tev_A 305 AVAEYVPE---NQAAVATKRERLRALARRFPAQADETLDPQ 342 (351)
T ss_dssp HHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC-------
T ss_pred HHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCCCCCCChh
Confidence 89999998 899999999999999999999999998764
No 9
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=4.9e-38 Score=308.59 Aligned_cols=170 Identities=22% Similarity=0.310 Sum_probs=144.8
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCC--CCHHHHHHhchHHHHHHHHcCCCceeec-
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTI--STYDDLEKIHMAPYLDCISQGVCTIMAS- 80 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~--~~~~~l~e~~l~PF~~~i~~g~~~vM~s- 80 (434)
|+|..||..+.+++.+|++| +.||++|+|||||||++..|+|...+. .+.++|++.||+||+++ ++|+.+||||
T Consensus 146 rsfgeDP~lv~~~a~A~v~Glq~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~~~~el~~~~l~PF~~a-~ag~~~VM~aH 224 (348)
T 4g6c_A 146 RAFHRDPRVVTLLAKSLNHGLSLAGMANCGKHFPGHGFAEADSHVALPTDDRTLDAILEQDVAPYDWL-GLSLAAVIPAH 224 (348)
T ss_dssp GSCCSSHHHHHHHHHHHHHHHHHTTCCCCEEEETCSSSCCC----CCCEECCCHHHHHHTTSHHHHHH-GGGCCEEEECS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhcCCceeeCCCCCCCCccCCCCCCCCcCCCCHHHHHHHHHHHHHHH-hcCCCeEEecc
Confidence 67888888888899999999 889999999999999999998876553 47899999999999999 9999999999
Q ss_pred --ccCCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHHHHH
Q 013894 81 --YSSWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLTY 158 (434)
Q Consensus 81 --y~~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~ 158 (434)
|+.+|+.|+|+|+++|+++||+||||+|+|||||++|.++... .+..+++++|++|||||+|+|+++. ....+.+
T Consensus 225 v~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~~--~~~~e~a~~Al~AG~Dm~l~~~~~~-~~~~~~~ 301 (348)
T 4g6c_A 225 VIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAAREG--GTLTQAADAALAAGCDMVLVCNQPD-AAEVVLN 301 (348)
T ss_dssp CEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGGTT--CCHHHHHHHHHHHTCSEEECCSCHH-HHHHHHH
T ss_pred eeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhhhc--CCHHHHHHHHHHcCCCEECCCCChH-HHHHHHH
Confidence 8999999999999999999999999999999999999987543 3567889999999999999998854 4567777
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHc
Q 013894 159 LVESGKVPMSRIDDAVERILRVKFVA 184 (434)
Q Consensus 159 av~~g~~~~~~id~a~~ril~~k~~~ 184 (434)
+++. +.++++++||++++.+.
T Consensus 302 al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 302 GLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp HCCC-------CHHHHHHHHTTSCCS
T ss_pred Hhhc-----ccchHHHHHHHHHHhcc
Confidence 7763 46789999999988653
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=6.2e-38 Score=307.63 Aligned_cols=169 Identities=19% Similarity=0.307 Sum_probs=145.7
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCC--CCHHHHHHhchHHHHHHHHcC-CCceeec
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTI--STYDDLEKIHMAPYLDCISQG-VCTIMAS 80 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~--~~~~~l~e~~l~PF~~~i~~g-~~~vM~s 80 (434)
|+|..||..+.+++.+|++| +.||++|+|||||||++..|+|...+. .+.++|++.||+||+++|++| +.+||||
T Consensus 133 rsfgeDP~lv~~~a~a~v~Glq~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~s~~el~~~~l~PF~~aI~~g~~~~VM~a 212 (349)
T 4gvf_A 133 RSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPA 212 (349)
T ss_dssp GSSCSSHHHHHHHHHHHHHHHHHHTCCCEEEEETCCTTCCCCSSSSCCBCCCCHHHHHHTHHHHHHHHHHTTCCSEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCceeeecccccCCCcccCCCCCCCCCCcCHHHHHHHHhHHHHHHHHcCCCCeEeec
Confidence 67778888888899999999 789999999999999999998877654 478999999999999999999 9999999
Q ss_pred ---ccCCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHHHH
Q 013894 81 ---YSSWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLT 157 (434)
Q Consensus 81 ---y~~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~ 157 (434)
|+.+|+.|+|+|+++|++|||+||||+|+|||||++|.++.. ..++.+++++|++|||||+|+|+++.. ...+.
T Consensus 213 Hv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~--~~~~~eaa~~Al~AG~Dm~l~~~~~~~-~~~~l 289 (349)
T 4gvf_A 213 HVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAI--MGSYAERAQASLDAGCDMILVCNNRKG-AVSVL 289 (349)
T ss_dssp SCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCGG--GCCHHHHHHHHHHHTCSEEEECSCHHH-HHHHH
T ss_pred ccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCccccccc--cCCHHHHHHHHHHcCCCEEcCCCCHHH-HHHHH
Confidence 899999999999999999999999999999999999987643 235678899999999999999988754 34566
Q ss_pred HHHHCCCCCHHHHHHHHHHHHH
Q 013894 158 YLVESGKVPMSRIDDAVERILR 179 (434)
Q Consensus 158 ~av~~g~~~~~~id~a~~ril~ 179 (434)
+++.. ++++|+++.+.|++.
T Consensus 290 ~al~~--~~~~r~~~~~~r~~~ 309 (349)
T 4gvf_A 290 DNLSP--IKAERVTRLYHKGSF 309 (349)
T ss_dssp HHSCC--CCCGGGGGGCCCCCC
T ss_pred HHhhh--ccHHHHHHHhhcCCC
Confidence 67654 677788777766543
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=4.9e-38 Score=308.01 Aligned_cols=168 Identities=17% Similarity=0.263 Sum_probs=146.5
Q ss_pred eccCCCCCCCCCCCcccccC--CCceeeeecccccCCCCcCCCcccCCCCCHHHHHHhchHHHHHHHHcC-CCceeec--
Q 013894 6 SGLQGRPPKEHPKGYPYVAG--RNNVIACAKHFVGDGGTERGINEGNTISTYDDLEKIHMAPYLDCISQG-VCTIMAS-- 80 (434)
Q Consensus 6 ~g~qg~~~~~~~~g~a~~~G--~~gv~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~~i~~g-~~~vM~s-- 80 (434)
|+|..||..+++++.+|++| +.||++|+|||||||++..|+|...+..+.++| +.||+||+++|++| +.+||||
T Consensus 130 rsfgeDP~lv~~~a~a~v~Glq~~gV~a~~KHFpG~G~~~~dsh~~~~v~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv 208 (340)
T 2oxn_A 130 RAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDERETI-AQDMAIFRAQIEAGVLDAMMPAHV 208 (340)
T ss_dssp GSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEETCCTTCCSCCSSSSCBCCCSCC-HHHHHHHHHHHHHTCCSEEEECSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCceeeeccCcCCCCccCCCCCCCccCCHHHH-HHHHHHHHHHHHcCCCCeeeeccc
Confidence 67888888888899999999 889999999999999999998877766655889 99999999999999 9999999
Q ss_pred -ccCCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCCCChHHHHHHHHHH
Q 013894 81 -YSSWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLTYL 159 (434)
Q Consensus 81 -y~~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~a 159 (434)
|+.+|+.|+|+|+++|++|||+||||+|+|||||+.|.++... .+..+++++|++|||||+|+|+++. ....+.++
T Consensus 209 ~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~~--~~~~ea~~~Al~AG~Dm~l~~~~~~-~~~~~~~a 285 (340)
T 2oxn_A 209 VYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAVM--GGPVERSHQALVAGCDMILICNKRE-AAVEVLDN 285 (340)
T ss_dssp BBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHHH--CSHHHHHHHHHHHTCSEEECCSCHH-HHHHHHHH
T ss_pred cccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhcc--CCHHHHHHHHHHcCCCEEcCCCCHH-HHHHHHHH
Confidence 8999999999999999999999999999999999999876432 3456888999999999999998765 44577778
Q ss_pred HHCCCCCHHHHHHHHHHHHH
Q 013894 160 VESGKVPMSRIDDAVERILR 179 (434)
Q Consensus 160 v~~g~~~~~~id~a~~ril~ 179 (434)
++ .++++|+++.+.|+..
T Consensus 286 v~--~~~~~Rl~~~~~~~~~ 303 (340)
T 2oxn_A 286 LP--IMEVPQAEALLKKQQF 303 (340)
T ss_dssp SC--CCCCGGGGGGSCSCCC
T ss_pred HH--HhhHHHHHHHhhcccc
Confidence 74 4888999988776643
No 12
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=54.00 E-value=23 Score=31.63 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=43.6
Q ss_pred HHHHHHcCCCceeecccCCCCccCCCCHHHHHHHHHhhc--CCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCee
Q 013894 66 YLDCISQGVCTIMASYSSWNGRKLHADHFLLTEVLKNKL--GFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMV 143 (434)
Q Consensus 66 F~~~i~~g~~~vM~sy~~~~g~pa~~s~~~l~~iLR~~~--gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~ 143 (434)
+++++++|+..|++ .+.++.++.--.+..+ .++|.++-+++.. ..+.+|+++|+|++
T Consensus 78 a~~ai~AGA~fivs---------P~~~~evi~~~~~~~v~~~~~~~~~PG~~Tp------------tE~~~A~~~Gad~v 136 (217)
T 3lab_A 78 FQKAIDAGAQFIVS---------PGLTPELIEKAKQVKLDGQWQGVFLPGVATA------------SEVMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHHTCSEEEE---------SSCCHHHHHHHHHHHHHCSCCCEEEEEECSH------------HHHHHHHHTTCCEE
T ss_pred HHHHHHcCCCEEEe---------CCCcHHHHHHHHHcCCCccCCCeEeCCCCCH------------HHHHHHHHcCCCEE
Confidence 56788999888876 3468888876666655 6789999877653 23568999999998
Q ss_pred c
Q 013894 144 M 144 (434)
Q Consensus 144 l 144 (434)
-
T Consensus 137 K 137 (217)
T 3lab_A 137 K 137 (217)
T ss_dssp E
T ss_pred E
Confidence 4
No 13
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=31.42 E-value=1.5e+02 Score=27.11 Aligned_cols=84 Identities=12% Similarity=0.094 Sum_probs=48.4
Q ss_pred HHHHHcCCCceeecccCCCCccCCCCHHHHHHHHHhhcCCCeEEEcChhhhhhhcCCCCCChHHHHHHHHHcCCCeecCC
Q 013894 67 LDCISQGVCTIMASYSSWNGRKLHADHFLLTEVLKNKLGFKGFVISDWEGLDRLSQPHGSNYRYCISTAVNAGIDMVMVP 146 (434)
Q Consensus 67 ~~~i~~g~~~vM~sy~~~~g~pa~~s~~~l~~iLR~~~gf~G~viSD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~ 146 (434)
+++.+.|+..||.--..+.+-.--.+..+|. .++++.+-. ||-|.+ + ...+.+.++++.|+|-+++.
T Consensus 150 krl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~-~I~e~~~vP--VI~eGG----I------~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 150 RQLAEIGCIAVMPLAGLIGSGLGICNPYNLR-IILEEAKVP--VLVDAG----V------GTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp HHHHHSCCSEEEECSSSTTCCCCCSCHHHHH-HHHHHCSSC--BEEESC----C------CSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHhCCCEEEeCCccCCCCCCcCCHHHHH-HHHhcCCCC--EEEeCC----C------CCHHHHHHHHHcCCCEEEEC
Confidence 5556678888888443332211123677775 455554433 443422 1 12456789999999998864
Q ss_pred C------ChHHHHHHHHHHHHCC
Q 013894 147 H------RFDQFFEDLTYLVESG 163 (434)
Q Consensus 147 ~------~~~~~~~~l~~av~~g 163 (434)
. ++....+++.+|++.|
T Consensus 217 SAI~~a~dP~~ma~af~~Av~aG 239 (265)
T 1wv2_A 217 TAIAHAKDPVMMAEAMKHAIVAG 239 (265)
T ss_dssp HHHHTSSSHHHHHHHHHHHHHHH
T ss_pred hHHhCCCCHHHHHHHHHHHHHHH
Confidence 3 3444556666666544
No 14
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=28.21 E-value=84 Score=30.52 Aligned_cols=71 Identities=25% Similarity=0.389 Sum_probs=40.2
Q ss_pred HHhhcCCCeEEEcChhhhhhhcCCC---------------C----CChHHHHHHHHHcCCCeecCCCChHHHHHHHHHHH
Q 013894 100 LKNKLGFKGFVISDWEGLDRLSQPH---------------G----SNYRYCISTAVNAGIDMVMVPHRFDQFFEDLTYLV 160 (434)
Q Consensus 100 LR~~~gf~G~viSD~~~m~~~~~~~---------------~----~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~av 160 (434)
|.+=+||+|.|+||.++..-++-.. | .+.++...---.-|.|+.|.-.....
T Consensus 88 Lh~Fm~w~~~ilTDSGgfQv~sl~~~~i~e~Gv~F~s~~dG~~~~ltpe~~~~iQ~~lgsDI~m~lDe~~~--------- 158 (381)
T 2ash_A 88 LHNFMGWKRPILTDSGGFQVFSLPKIRIDDEGVVFRSPIDGSKVFLNPEISMEVQIALGSDICMVFDHCPV--------- 158 (381)
T ss_dssp HHHHHTCCSCEEECCCHHHHHTSTTCEECSSCEEEECTTTCCEEEECHHHHHHHHHHHTCSEEECCCCCCC---------
T ss_pred hHhhccCCCCeeecccccccccccccccCCCCceEecCcCCceeecCHHHHHHHHHHhCCCEEEECCcCCC---------
Confidence 6667899999999998654322110 1 22233332223459999885321111
Q ss_pred HCCCCCHHHHHHHHHHHHHHH
Q 013894 161 ESGKVPMSRIDDAVERILRVK 181 (434)
Q Consensus 161 ~~g~~~~~~id~a~~ril~~k 181 (434)
-..+.+++.+|+.|-+++-
T Consensus 159 --~~~~~~~~~~sv~rT~rWa 177 (381)
T 2ash_A 159 --PDADYEEVKEATERTYRWA 177 (381)
T ss_dssp ----CCHHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHH
Confidence 1245677777777777654
No 15
>1gng_X Frattide, glycogen synthase kinase-3 beta; transferase, protein kinase, GSK3/frattide complex, phosphorylated, active; HET: PTR; 2.6A {Homo sapiens}
Probab=26.46 E-value=44 Score=20.79 Aligned_cols=22 Identities=41% Similarity=0.510 Sum_probs=17.2
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHH
Q 013894 153 FEDLTYLVESGKVPMSRIDDAVERIL 178 (434)
Q Consensus 153 ~~~l~~av~~g~~~~~~id~a~~ril 178 (434)
.+.|.+.+.+|.+ |.+||+|+-
T Consensus 13 ~~lLQ~Llr~G~L----IkEAVrRlq 34 (39)
T 1gng_X 13 HRLLQQLVLSGNL----IKEAVRRLH 34 (39)
T ss_dssp HHHHHHHHHHTCH----HHHHHHHHH
T ss_pred HHHHHHHHHhCcH----HHHHHHHHH
Confidence 4567788888886 888999974
No 16
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.21 E-value=1.9e+02 Score=22.52 Aligned_cols=35 Identities=9% Similarity=0.114 Sum_probs=20.7
Q ss_pred HHHHHHHcCCCeecC-CCChHHHHHHHHHHHHCCCC
Q 013894 131 CISTAVNAGIDMVMV-PHRFDQFFEDLTYLVESGKV 165 (434)
Q Consensus 131 ~~~~al~AG~D~~l~-~~~~~~~~~~l~~av~~g~~ 165 (434)
...+++++|+|-.+. +.+..+..+.+..+++.+..
T Consensus 103 ~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~~~~ 138 (152)
T 3eul_A 103 IVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGRDV 138 (152)
T ss_dssp HHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcCCee
Confidence 456788888875553 44555555666666655543
No 17
>1x9t_B N-terminl peptide of fiber protein; jellyroll domain, insertion domain, anti-parallel beta sheets, virus like particle/peptide complex; HET: C15; 3.50A {Human adenovirus 2}
Probab=22.30 E-value=28 Score=19.92 Aligned_cols=10 Identities=30% Similarity=0.992 Sum_probs=8.2
Q ss_pred CCCccccccc
Q 013894 414 TYDPLFPLGF 423 (434)
Q Consensus 414 ~~~~~ypFG~ 423 (434)
.|+|.|||++
T Consensus 10 dFnPVYPYd~ 19 (26)
T 1x9t_B 10 TFNPVYPYDT 19 (26)
T ss_pred cCcccccCCC
Confidence 3789999986
No 18
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=21.11 E-value=2e+02 Score=27.87 Aligned_cols=71 Identities=21% Similarity=0.224 Sum_probs=39.9
Q ss_pred HHhhcCCCeEEEcChhhhhhhc--CC-----C-------------CCChHHHHHHHHHcCCCeecCCCChHHHHHHHHHH
Q 013894 100 LKNKLGFKGFVISDWEGLDRLS--QP-----H-------------GSNYRYCISTAVNAGIDMVMVPHRFDQFFEDLTYL 159 (434)
Q Consensus 100 LR~~~gf~G~viSD~~~m~~~~--~~-----~-------------~~~~~~~~~~al~AG~D~~l~~~~~~~~~~~l~~a 159 (434)
|++=+||+|.|+||.++..-++ .. . -.+.++...---.-|.|+.|.-....
T Consensus 89 Lh~Fm~w~~~ilTDSGgfQv~sl~~~~~i~e~Gv~F~s~~dG~~~~ltpe~~~~iq~~lg~DI~m~lDe~~--------- 159 (386)
T 3bld_A 89 LHSFMGWDRPILTDSGGFQVMSLSSLTKQSEEGVTFKSHLDGSRHMLSPERSIEIQHLLGSDIVMAFDECT--------- 159 (386)
T ss_dssp HHHHHTCCSCEEECCSHHHHHC------CBTTBCCCCC--------CCHHHHHHHHHHHTCSEEECCCCCC---------
T ss_pred hHhhccCCCCceeecCceEEEeccccccCCCCceeeecCCCCceeecCHHHHHHHHHHhCCCEEEecCcCC---------
Confidence 6667899999999998654321 10 0 12223333222355999988532110
Q ss_pred HHCCCCCHHHHHHHHHHHHHHH
Q 013894 160 VESGKVPMSRIDDAVERILRVK 181 (434)
Q Consensus 160 v~~g~~~~~~id~a~~ril~~k 181 (434)
.-..+.+++.+|+.|-+++-
T Consensus 160 --~~~~~~~~~~~sv~rT~rW~ 179 (386)
T 3bld_A 160 --PYPATPSRAASSMERSMRWA 179 (386)
T ss_dssp --CSSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHHH
Confidence 11345677777777776654
No 19
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=20.85 E-value=75 Score=29.78 Aligned_cols=17 Identities=12% Similarity=0.491 Sum_probs=13.8
Q ss_pred HHHHHHHcCCCeecCCC
Q 013894 131 CISTAVNAGIDMVMVPH 147 (434)
Q Consensus 131 ~~~~al~AG~D~~l~~~ 147 (434)
-+.+|+.||.|++|..+
T Consensus 219 e~~eAl~aGaDiImLDn 235 (300)
T 3l0g_A 219 QVEESLSNNVDMILLDN 235 (300)
T ss_dssp HHHHHHHTTCSEEEEES
T ss_pred HHHHHHHcCCCEEEECC
Confidence 35789999999998754
Done!