Query 013895
Match_columns 434
No_of_seqs 185 out of 372
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 19:07:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013895.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013895hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1e09a_ d.129.3.1 (A:) Major t 51.4 3.3 0.00024 34.8 2.3 35 207-249 123-157 (159)
2 d1fm4a_ d.129.3.1 (A:) Major t 47.2 4.2 0.0003 34.1 2.3 18 232-249 140-157 (159)
3 d1icxa_ d.129.3.1 (A:) Plant p 43.1 5.1 0.00037 33.6 2.2 19 230-248 136-154 (155)
4 d1xdfa1 d.129.3.1 (A:1-157) Pl 39.1 4.2 0.00031 34.2 1.0 34 207-248 122-155 (157)
5 d2pvba_ a.39.1.4 (A:) Parvalbu 36.7 58 0.0042 24.5 7.5 70 199-272 10-82 (107)
6 d2c2la2 g.44.1.2 (A:225-304) S 33.7 8.3 0.0006 28.1 1.8 18 233-250 61-78 (80)
7 d3c7ba3 d.134.1.1 (A:167-238,A 19.6 42 0.0031 27.9 4.0 41 168-210 109-149 (185)
8 d1nkpa_ a.38.1.1 (A:) Myc prot 18.3 85 0.0062 22.8 5.1 34 327-360 52-85 (88)
9 d2qzga1 a.29.14.1 (A:4-91) Unc 16.7 27 0.002 26.9 1.8 22 193-215 50-71 (88)
10 d2bk0a1 d.129.3.1 (A:2-154) Ma 16.7 27 0.002 28.7 1.9 14 233-246 140-153 (153)
No 1
>d1e09a_ d.129.3.1 (A:) Major tree pollen allergen {Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229]}
Probab=51.40 E-value=3.3 Score=34.81 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=24.3
Q ss_pred cCCCCCChhHHHHHHhhcCCccccccchhHHHHHHHHHhCCCC
Q 013895 207 AMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEV 249 (434)
Q Consensus 207 A~D~nL~~sKF~~LAealPd~AR~~hDgLYRAIDiYLKaHp~l 249 (434)
..+..+++.++....+. .-++|+|||-||.+||..
T Consensus 123 ~~~~~~~~e~~~~~~e~--------~~~~~K~iEayLlanp~~ 157 (159)
T d1e09a_ 123 KGNVEIKEEHVKAGKEK--------ASNLFKLIETYLKGHPDA 157 (159)
T ss_dssp CSSCCCCHHHHHHHHHH--------HHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCHHHHHHHHHH--------HHHHHHHHHHHHhhChhh
Confidence 44556667766543332 247899999999999973
No 2
>d1fm4a_ d.129.3.1 (A:) Major tree pollen allergen {European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]}
Probab=47.16 E-value=4.2 Score=34.09 Aligned_cols=18 Identities=39% Similarity=0.767 Sum_probs=15.8
Q ss_pred cchhHHHHHHHHHhCCCC
Q 013895 232 DDGLYRAIDTYLKAHPEV 249 (434)
Q Consensus 232 hDgLYRAIDiYLKaHp~l 249 (434)
..++++||+.||-+||..
T Consensus 140 ~~~~~K~iE~YLlanp~~ 157 (159)
T d1fm4a_ 140 GETLLRAVESYLLAHSDA 157 (159)
T ss_dssp HHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHhhChhh
Confidence 468999999999999973
No 3
>d1icxa_ d.129.3.1 (A:) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]}
Probab=43.06 E-value=5.1 Score=33.61 Aligned_cols=19 Identities=42% Similarity=0.816 Sum_probs=16.1
Q ss_pred cccchhHHHHHHHHHhCCC
Q 013895 230 ATDDGLYRAIDTYLKAHPE 248 (434)
Q Consensus 230 ~~hDgLYRAIDiYLKaHp~ 248 (434)
..--|+++||+.||-|||.
T Consensus 136 e~~~~~fK~iE~YLlanPd 154 (155)
T d1icxa_ 136 FKGLGLFKAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhhCcC
Confidence 3456899999999999996
No 4
>d1xdfa1 d.129.3.1 (A:1-157) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]}
Probab=39.13 E-value=4.2 Score=34.25 Aligned_cols=34 Identities=35% Similarity=0.516 Sum_probs=24.7
Q ss_pred cCCCCCChhHHHHHHhhcCCccccccchhHHHHHHHHHhCCC
Q 013895 207 AMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPE 248 (434)
Q Consensus 207 A~D~nL~~sKF~~LAealPd~AR~~hDgLYRAIDiYLKaHp~ 248 (434)
..|..+++.+.....+ ...++|+||+.||-+||.
T Consensus 122 ~~~~~~~~e~ik~~~e--------~~~~~~K~iEaYLlanpd 155 (157)
T d1xdfa1 122 KGDAQPNEEEGKAAKA--------RGDAFFKAIENYLSAHPE 155 (157)
T ss_dssp SSSSCCCHHHHHHHHH--------HHHTTTHHHHHHHHTSGG
T ss_pred CCCCCCCHHHHHHHHH--------HHHHHHHHHHHHHhhCCC
Confidence 3456667777655433 246899999999999995
No 5
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}
Probab=36.69 E-value=58 Score=24.48 Aligned_cols=70 Identities=20% Similarity=0.231 Sum_probs=54.2
Q ss_pred HHhHHHHhcCCCCCChhHHHHHHhhcCCccccccchhHHHHHHHHHhCCC-CcHHhhhhhccccc--cCCCCHHHhH
Q 013895 199 VDCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPE-VTKQERKSLCRLID--SRKLSPEASL 272 (434)
Q Consensus 199 vD~YLaEIA~D~nL~~sKF~~LAealPd~AR~~hDgLYRAIDiYLKaHp~-lse~Er~~lC~~ld--c~KLS~eAc~ 272 (434)
|+.++.++..|..+...+|..+... .....|-|..|.+.|=+.+.+ |+..|-+.+++-+. ..++|.+-+.
T Consensus 10 i~~~~~~~~~~gsi~~~eF~~~~~l----~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~ 82 (107)
T d2pvba_ 10 VAAALAACSAADSFKHKEFFAKVGL----ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETK 82 (107)
T ss_dssp HHHHHHHTCSTTCCCHHHHHHHHTG----GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHH
T ss_pred HHHHHHhccCCCCcCHHHHHHHHhc----ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHH
Confidence 6777888888899999999887652 234567799999999888888 99999888887663 4577776443
No 6
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.67 E-value=8.3 Score=28.05 Aligned_cols=18 Identities=17% Similarity=0.254 Sum_probs=15.9
Q ss_pred chhHHHHHHHHHhCCCCc
Q 013895 233 DGLYRAIDTYLKAHPEVT 250 (434)
Q Consensus 233 DgLYRAIDiYLKaHp~ls 250 (434)
..|..+|+-||+.|||.-
T Consensus 61 ~~L~~~I~~~l~~~~~~~ 78 (80)
T d2c2la2 61 LAMKEVIDAFISENGWVE 78 (80)
T ss_dssp HHHHHHHHHHHTTCSCSS
T ss_pred HHHHHHHHHHHHHCCCcC
Confidence 568999999999999974
No 7
>d3c7ba3 d.134.1.1 (A:167-238,A:305-417) Dissimilatory sulfite reductase subunit alpha, DsrA {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=19.64 E-value=42 Score=27.86 Aligned_cols=41 Identities=7% Similarity=0.080 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhccccCccchhHHHHHHHHHHhHHHHhcCCC
Q 013895 168 VELVSRLVKKFVHLDIEGAKSGAALVKVAKLVDCYLAEAAMDS 210 (434)
Q Consensus 168 VdlV~Ril~~Fl~~~~~~~~~~~~l~kVakLvD~YLaEIA~D~ 210 (434)
+++|.+|++.|..+.........-+.+|| +|.|+.++..++
T Consensus 109 ~~~v~~ii~~y~e~g~~~ER~g~~ieRvG--le~fke~l~~~~ 149 (185)
T d3c7ba3 109 KEILEAIWDWWDEEGKFRERIGELIWRKG--MREFLKVIGREA 149 (185)
T ss_dssp HHHHHHHHHHHHHHCCTTCCHHHHHHHHC--HHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhCCCcchHHHHHHHcC--hHHHHHHHCCCC
Confidence 56789999999877654322233444454 556666665544
No 8
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.25 E-value=85 Score=22.81 Aligned_cols=34 Identities=24% Similarity=0.210 Sum_probs=24.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013895 327 REVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKL 360 (434)
Q Consensus 327 re~~~l~~e~~~mr~rv~eLe~~c~~mq~~~ekl 360 (434)
.-+..|+.+++.+..++..|+++...++++++.+
T Consensus 52 ~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445667777777777777777777777777766
No 9
>d2qzga1 a.29.14.1 (A:4-91) Uncharacterized protein MMP1188 {Methanococcus maripaludis [TaxId: 39152]}
Probab=16.71 E-value=27 Score=26.89 Aligned_cols=22 Identities=27% Similarity=0.521 Sum_probs=16.5
Q ss_pred HHHHHHHHhHHHHhcCCCCCChh
Q 013895 193 VKVAKLVDCYLAEAAMDSNLSLS 215 (434)
Q Consensus 193 ~kVakLvD~YLaEIA~D~nL~~s 215 (434)
.+.|.-| ++|-||+.|||+|+.
T Consensus 50 vRaa~ai-s~LDeIs~DPNmP~h 71 (88)
T d2qzga1 50 VRSATAI-QYLDDISEDPNMPIH 71 (88)
T ss_dssp HHHHHHH-HHHHHHTTCTTCCHH
T ss_pred HHHHHHH-HHHHHhhcCCCCCcH
Confidence 3455544 679999999999864
No 10
>d2bk0a1 d.129.3.1 (A:2-154) Major allergen api g 1 {Celery (Apium graveolens) [TaxId: 4045]}
Probab=16.71 E-value=27 Score=28.73 Aligned_cols=14 Identities=36% Similarity=0.812 Sum_probs=11.1
Q ss_pred chhHHHHHHHHHhC
Q 013895 233 DGLYRAIDTYLKAH 246 (434)
Q Consensus 233 DgLYRAIDiYLKaH 246 (434)
-|+|+|||.||-+|
T Consensus 140 ~~~~K~iE~YLlan 153 (153)
T d2bk0a1 140 TALFKALEAYLIAN 153 (153)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 47788888888776
Done!