BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013899
(434 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BUV8|GP107_MOUSE Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2
Length = 551
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 210/340 (61%), Gaps = 5/340 (1%)
Query: 92 TCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQ---YTLVFANCLQQLKVSMDVRSAM 148
+ V + ++ F+ + +G + ++ + DQ Y+L F C + S
Sbjct: 181 STVDSKAITERSFSIHKNDGVVSFQFFFNISTDDQEGLYSLYFHKCSGNNVKPGEQASFS 240
Query: 149 YNLE-GRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAV 207
N+ N YLSAG+ LP++Y +L +F+ +WIH+L ++R VF+IH+ M A+
Sbjct: 241 LNIAITEKNPNSYLSAGEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAAL 300
Query: 208 VVLKAVNLLCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPY 266
K+++L+ A D YI G GW V++Y+ LKG LF I LIGTGW+F+K
Sbjct: 301 PFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHI 360
Query: 267 LQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVW 326
L DK+KK+ MIVIPLQV+AN+A ++I+ T ++ WK LVD++CC A+LFP+VW
Sbjct: 361 LSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVW 420
Query: 327 SIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVV 386
SI++L+EA+ TDGKAA+NL KL LFR YY++++CYIYFTR++ + L+ +++ W +
Sbjct: 421 SIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFAVPFQWKWLYQL 480
Query: 387 AGELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEAL 426
E ATL F+V TGYKF+P + NPY + E+++ E++
Sbjct: 481 LDETATLVFFVLTGYKFRPASDNPYLQLSQEDDDLEMESV 520
>sp|Q5VW38|GP107_HUMAN Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1
Length = 600
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 221/399 (55%), Gaps = 57/399 (14%)
Query: 84 QQLEDG---EITCVLQSDLIKQVFTFNNLNGKSEYSTIYSENDADQ---YTLVFANCLQQ 137
Q+ +DG + + V + ++ F+ +N G + ++ + DQ Y+L F CL +
Sbjct: 172 QKTQDGGKSKRSTVDSKAMGEKSFSVHNNGGAVSFQFFFNISTDDQEGLYSLYFHKCLGK 231
Query: 138 LKVSMDVRSAMYNLEGRSNNRD-YLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLT 196
++ D + ++E N D YLSAG+ LP++Y + +F+ +WIH+L ++R
Sbjct: 232 -ELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRND 290
Query: 197 VFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVL 255
VF+IH+ M A+ K+++L+ A D YI G GW V++Y+ LKG LF I L
Sbjct: 291 VFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIAL 350
Query: 256 IGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVV 315
IGTGW+F+K L DK+KK+ MIVIPLQV+AN+A ++I+ T ++ WK LVD++
Sbjct: 351 IGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLL 410
Query: 316 CCCAVLFPIVWSIKNLREAARTDGK----------------------------------- 340
CC A+LFP+VWSI++L+EA+ TDGK
Sbjct: 411 CCGAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASS 470
Query: 341 -------------AAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVA 387
AA+NL KL LFR YY++++CYIYFTR++ + L+ +++ W +
Sbjct: 471 CPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLL 530
Query: 388 GELATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEAL 426
E ATL F+V TGYKF+P + NPY + EEE+ E++
Sbjct: 531 DETATLVFFVLTGYKFRPASDNPYLQLSQEEEDLEMESV 569
>sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3
Length = 543
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 201/327 (61%), Gaps = 8/327 (2%)
Query: 98 DLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLEG--RS 155
DL+ + NN S + I S+ + QY+L F NC S+ + +++ R
Sbjct: 191 DLVLGLSHLNNSYNFSFHVVIGSQAEEGQYSLNFHNC----NNSVPGKEHPFDITVMIRE 246
Query: 156 NNRD-YLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVN 214
N D +LSA + L ++Y + S + W+ +L R +VF+IH+ M A+ K+++
Sbjct: 247 KNPDGFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTKSIS 306
Query: 215 LLCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKK 273
LL + + +I G G V++Y+ LKG LF I LIG+GW+F+K L DKEKK
Sbjct: 307 LLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKK 366
Query: 274 VLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLRE 333
V IVIP+QV+AN+A ++I+ D++ WK++ LVD++CC A+LFP+VWSI++L++
Sbjct: 367 VFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFLVDLICCGAILFPVVWSIRHLQD 426
Query: 334 AARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATL 393
A+ TDGK AVNL KL LFR YY++VICY+YFTR++ L+ +++ W + E +TL
Sbjct: 427 ASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTL 486
Query: 394 AFYVFTGYKFKPEAHNPYFVIDDEEEE 420
AF+V TGYKF+P +NPY + E+EE
Sbjct: 487 AFFVLTGYKFQPTGNNPYLQLPQEDEE 513
>sp|Q91WD0|GP108_MOUSE Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1
Length = 569
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 211/384 (54%), Gaps = 23/384 (5%)
Query: 46 HRGRLELNVSKISLSNPDLDFSKVGFFLCTHDSWLHVLQQLEDGEITCVLQSDLIKQVFT 105
H E++ K + + P + K H S Q G+ + D QV
Sbjct: 170 HPSPTEMSAVKENQTAPQVSGDKTTPGEHRHSSERQPPTQDPSGK-----EKD---QVLG 221
Query: 106 FNNLNGKSEYS---TIYSENDADQYTLVFANCL-----QQLKVSMDVRSAMYNLEGRSNN 157
+LN +S I S + QY+L F NC Q+ + V N EG
Sbjct: 222 LGHLNDSYNFSFHIVISSRAEEGQYSLNFHNCHNSIPGQEQPFDLTVMIREKNPEG---- 277
Query: 158 RDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLLC 217
+LSA + L ++Y + S + W+ VL + +VF+IH+ M A+ K+V+LL
Sbjct: 278 --FLSAAEIPLFKLYLIMSACFLAADIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLF 335
Query: 218 EAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLM 276
+ + +I G G V+ Y+ LKG LF I LIG+GW+F+K L DKEKK+
Sbjct: 336 HSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFG 395
Query: 277 IVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAAR 336
IVIPLQV+AN+A +VI+ D+ WK++ LVD++CC A+LFP+VWSI++L++A+
Sbjct: 396 IVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASG 455
Query: 337 TDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFY 396
TDGK AVNL +L LFR YY++VICYIYFTR++ L+ +++ W + E +TLAF+
Sbjct: 456 TDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQVAVPFQWQWLYQLLVESSTLAFF 515
Query: 397 VFTGYKFKPEAHNPYFVIDDEEEE 420
V TGYKF+P NPY + E+EE
Sbjct: 516 VLTGYKFQPAGDNPYLQLPQEDEE 539
>sp|Q6P6V6|GP108_RAT Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1
Length = 577
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 201/341 (58%), Gaps = 15/341 (4%)
Query: 96 QSDLIKQVFTFNNLNGKSEYSTIYSENDADQYTLVFANCL-----QQLKVSMDVRSAMYN 150
+ DL+ + N+ S + I S + QY+L F NC Q+ + V N
Sbjct: 222 EKDLVLGLGHLNDSYNFSFHIVIGSRAEEGQYSLNFHNCYNTIPGQEQPFDLTVMIREKN 281
Query: 151 LEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVL 210
EG +LSA + L ++Y + S + W+ VL + +VF+IH+ M A+
Sbjct: 282 PEG------FLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSVFKIHWLMAALAFT 335
Query: 211 KAVNLLCEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQD 269
K+V+LL + + +I G G V+ Y+ LKG LF I LIG+GW+F+K L D
Sbjct: 336 KSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSD 395
Query: 270 KEKKVLMIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIK 329
KEKK+ IVIPLQV+AN+A +VI+ D+ WK++ LVD++CC A+LFP+VWSI+
Sbjct: 396 KEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPVVWSIR 455
Query: 330 NLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGE 389
+L++A+ TDGK A+NL KL LFR YY++VICYIYFTR++ L +++ W + E
Sbjct: 456 HLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVAVPFQWQWLYQLLVE 515
Query: 390 LATLAFYVFTGYKFKPEAHNPYFVIDDEEEEAAAEALKLEE 430
+TLAF+V TGYKF+P NPY + +E+E E +++E+
Sbjct: 516 SSTLAFFVLTGYKFQPAGDNPYLQLPQQEDE---EDVQMEQ 553
>sp|Q148L1|GP108_BOVIN Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1
Length = 548
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 190/326 (58%), Gaps = 11/326 (3%)
Query: 103 VFTFNNLNGKSEYS---TIYSENDADQYTLVFANCLQQLKVSMDVRSAMYNLE---GRSN 156
V +LN +S I S + QY L F NC S+ R +++ N
Sbjct: 198 VLGLGHLNNSYNFSFHVVIGSRAEEGQYNLNFHNC----DNSVPGREQPFDITVMIREKN 253
Query: 157 NRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAVVVLKAVNLL 216
YLSA + L ++Y + S + W+ +L + VF+IH+ M A+ K+V+LL
Sbjct: 254 PEGYLSAAEIPLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLL 313
Query: 217 CEAEDKSYIKRTGSA-HGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVL 275
+ + +I G G V+ Y+ LKG LF I LIG+GW+F+K L DKEKK+
Sbjct: 314 FHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIF 373
Query: 276 MIVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAA 335
IVIPLQV+AN+A +V++ D+ WK++ LVD++CC +LFP+VWSI++L++A+
Sbjct: 374 GIVIPLQVLANVAYIVMESREEGASDYGIWKEILFLVDLICCGTILFPVVWSIRHLQDAS 433
Query: 336 RTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAF 395
TDGK AVNL KL LFR YY++VICYIYFTR++ L + +++ W + E +TLAF
Sbjct: 434 GTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAF 493
Query: 396 YVFTGYKFKPEAHNPYFVIDDEEEEA 421
+V TGYKF+P NPY + E+EE
Sbjct: 494 FVLTGYKFQPARDNPYLQLPQEDEEG 519
>sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2
SV=1
Length = 541
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 136 QQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWI--HVLYRK 193
+ +K ++ V +M G ++SA L Y + ++Y +LA LW Y K
Sbjct: 184 ENVKWNLSVTVSMKGPHG------FISASDWPLMIFYMVMCIMYILLALLWFIWSACYWK 237
Query: 194 RLTVFRIHFFMLAVVVLKAVNLLCEAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTL 252
L RI F++ AV+ L + + TG S+HG + + S +K L
Sbjct: 238 DL--LRIQFWIAAVIFLGMLEKAVYYAEYQNTDNTGVSSHGLLIFAELISSIKRTLARLL 295
Query: 253 IVLIGTGWSFLKPYL 267
+ ++ G+ +KP L
Sbjct: 296 VTIVSLGYGIIKPRL 310
>sp|Q86V85|GP180_HUMAN Integral membrane protein GPR180 OS=Homo sapiens GN=GPR180 PE=2
SV=1
Length = 440
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 148 MYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYRKRLTVFRIHFFMLAV 207
+ N + N D+ SAG++ L +FL L+YF++A ++ L++ +H M+
Sbjct: 150 LLNPDAEGNPFDHFSAGESGLHEFFFLLVLVYFVIACIYAQSLWQAIKKGGPMH--MILK 207
Query: 208 VVLKAVNLLCEAEDKSYIKRTG-SAHGWDVLFY-----MFSFLKGITLFTLIVLIGTGWS 261
V+ A+ L + +YI + S G V F F I + L++ + GW+
Sbjct: 208 VLTTALLLQAGSALANYIHFSSYSKDGIGVPFMGSLAEFFDIASQIQMLYLLLSLCMGWT 267
Query: 262 FLK 264
++
Sbjct: 268 IVR 270
>sp|O05523|TATCY_BACSU Sec-independent protein translocase protein TatCy OS=Bacillus
subtilis (strain 168) GN=tatC2 PE=1 SV=1
Length = 254
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 192 RKRLTVFRIHF---FMLAVVVLKAVNLLCEAEDKSYIKRTGSAHGWDVL--FYMFSFLKG 246
RKRL + + F F+ + K + + + D++ + + D L F F+F+ G
Sbjct: 19 RKRLLIVALAFVVFFIAGFFLAKPIIVYLQETDEAKQLTLNAFNLTDPLYVFMQFAFIIG 78
Query: 247 ITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIA 288
I L + ++L W+F+ P L +KE+KV + IP+ ++ +A
Sbjct: 79 IVLTSPVILYQL-WAFVSPGLYEKERKVTLSYIPVSILLFLA 119
>sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1
Length = 555
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 108/275 (39%), Gaps = 24/275 (8%)
Query: 160 YLSAGKTILPRIYFLFSLIYFILAGLWI--HVLYRKRLTVFRIHFFMLAVVVLKAVNLLC 217
Y+SA L Y + ++Y + LW+ Y K + RI F++ AV+ L +
Sbjct: 209 YISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWK--DILRIQFWIAAVIFLGMLEKAV 266
Query: 218 EAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLM 276
+ I TG S G + + S +K L++++ G+ +KP L +V+
Sbjct: 267 FYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIG 326
Query: 277 IVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAAR 336
+ + + A I V+ G + V ++D + + + ++K LR
Sbjct: 327 LGLLYLIFAAIEGVMRVIGGSKHLAVVLTDIVLAVIDSIFVWFIFISLAQTMKTLRLRK- 385
Query: 337 TDGKAAVNLMKLTLFRQY-------YIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGE 389
N +K +L+R + + I ++ +T + + + LW
Sbjct: 386 -------NTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWS 438
Query: 390 LATLAFYVFTGYKFKPEAHNPYF----VIDDEEEE 420
+ + ++P A+N + +IDD ++E
Sbjct: 439 FLFSVILIVIMFLWRPSANNQRYAFMPLIDDSDDE 473
>sp|C5BG86|ATKA_EDWI9 Potassium-transporting ATPase A chain OS=Edwardsiella ictaluri
(strain 93-146) GN=kdpA PE=3 SV=1
Length = 565
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 173 FLFSLIYFILAGLWIHVLYR---KRLTVFRIHFFMLAVVVL-------KAVNLLCEAEDK 222
LF L+ +AGL I K++TVF + LA+++ A+ LLC+A +
Sbjct: 384 LLFVLLTVFIAGLMIGRTPEYLGKKITVFEVKMTALAILIPPALVLTGSAIALLCDA-GR 442
Query: 223 SYIKRTGSAHGWDVLFYMFS 242
S I G AHG+ + Y FS
Sbjct: 443 SAIHNPG-AHGFSEVLYAFS 461
>sp|P19320|VCAM1_HUMAN Vascular cell adhesion protein 1 OS=Homo sapiens GN=VCAM1 PE=1 SV=1
Length = 739
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 134 CLQQLKVSMDVRSAMYNLEGRSNNRDYLSAGKTILPRIYFLFSLI 178
C + KV +RS +++GR NN+DY S +L YF SLI
Sbjct: 668 CESKNKVGSQLRSLTLDVQGRENNKDYFSPELLVL---YFASSLI 709
>sp|Q5FWM8|GP180_XENLA Integral membrane protein GPR180 OS=Xenopus laevis GN=gpr180 PE=2
SV=1
Length = 435
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 147 AMYNLEGRSNNRDYLSAGKTILPRIYFLFSLIYFILAGLWIHVLYR 192
AM N + N D+ A ++ L +FL LIYF+ A ++I L++
Sbjct: 144 AMLNPDAAGNPFDHFGADESGLHEFFFLLVLIYFVAACIYIQALWQ 189
>sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1
Length = 555
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 109/276 (39%), Gaps = 26/276 (9%)
Query: 160 YLSAGKTILPRIYFLFSLIYFILAGLWI--HVLYRKRLTVFRIHFFMLAVVVLKAVNLLC 217
Y+SA L Y + ++Y + LW+ Y K + RI F++ AV+ L +
Sbjct: 208 YISASDWPLMIFYMVMCIVYILYGILWLTWSACYWK--DILRIQFWIAAVIFLGMLEKAV 265
Query: 218 EAEDKSYIKRTG-SAHGWDVLFYMFSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLM 276
+ I TG S G + + S +K L++++ G+ +KP L +V+
Sbjct: 266 FYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIG 325
Query: 277 IVIPLQVVANIAQVVIDETGPYGQDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAAR 336
+ + + A + V+ G + + ++D + + + ++K LR
Sbjct: 326 LGLLYLIFAAVEGVMRVIGGSNHLAVVLDDIILAVIDSIFVWFIFISLAQTMKTLRLRK- 384
Query: 337 TDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYGLETITSYKYLWTSVVAGELATLAFY 396
N +K +L+R + +I + +V G T T S AF+
Sbjct: 385 -------NTVKFSLYRHFKNTLI-FAVLASIVFMGWTTKTFRIAKCQSDWMERWVDDAFW 436
Query: 397 VF--------TGYKFKPEAHNPYF----VIDDEEEE 420
F + ++P A+N + +IDD ++E
Sbjct: 437 SFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDE 472
>sp|P30715|AT1B1_BUFMA Sodium/potassium-transporting ATPase subunit beta-1 OS=Bufo marinus
PE=2 SV=1
Length = 303
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 216 LCEAEDKSYIKRTGSAHGWDVLFYM--FSFLKGITLFTLIVLIGTGWSFLKPYLQDKEKK 273
L + E K ++ RTGS+ +LFY+ + L GI + T+ VL+ T S +P QD+
Sbjct: 17 LWDPEKKEFMGRTGSSWFKILLFYLVFYGCLAGIFIGTIQVLLLT-LSIYEPKYQDRVAP 75
Query: 274 VLMIVIPLQVVANIAQVVIDET 295
+ +P V A I+ V + +
Sbjct: 76 PGLTQVPRAVKAEISFTVGNPS 97
>sp|Q6AXS0|NCKX6_RAT Sodium/potassium/calcium exchanger 6, mitochondrial OS=Rattus
norvegicus GN=Slc24a6 PE=1 SV=1
Length = 585
Score = 32.0 bits (71), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 169 PRIYFLFSLIYFILAGLWIHV-------LYRKRLTVFRIHFFMLAVVVLKAVNLLCEAED 221
PR+++LF+ + F+ + LWI+ + R VFR+ +L + +L N + +A
Sbjct: 415 PRLHWLFAFLGFLTSALWINAAATEVVNILRSLGVVFRLSNTVLGLTLLAWGNSIGDAFS 474
Query: 222 KSYIKRTGSAHGWDVLFYMFSFLKGITLFTLIVLIGTG 259
+ R G FS G +F ++V +G G
Sbjct: 475 DFTLARQGYPR------MAFSACFGGIIFNILVGVGLG 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,110,852
Number of Sequences: 539616
Number of extensions: 6324001
Number of successful extensions: 18378
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 18348
Number of HSP's gapped (non-prelim): 36
length of query: 434
length of database: 191,569,459
effective HSP length: 120
effective length of query: 314
effective length of database: 126,815,539
effective search space: 39820079246
effective search space used: 39820079246
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)