BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013901
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 342 bits (876), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 248/398 (62%), Gaps = 5/398 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 7 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 67 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 186
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 187 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 245
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG++ +S+D RI+N HF R+ L+D+ KV+
Sbjct: 246 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 303
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
HGG D++ IAPT+L+DV S +M EEIFGP++PI+ V +E++ IN KPL
Sbjct: 304 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPL 361
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F+NN+K+ ++ + S+GG+ ND VH+ + L
Sbjct: 362 ALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTL 399
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 325 bits (833), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 246/398 (61%), Gaps = 5/398 (1%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F+SG+T+ +R+ QL++L +++ E+E ++V AL DL K E + EV +
Sbjct: 24 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I+ +++L W E + + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+VLKPSE++ +SLLA ++ +Y+D V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +I+M AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322
PD+I+ FYG++ +S+D RI+++ HF R+ L++ KV+
Sbjct: 263 PDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA-- 320
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
+GG D IAPT+L DV S +M EEIFGP+LPI+ V +E++ IN KPL
Sbjct: 321 --YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPL 378
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVINDTAVHVIMLAL 420
A Y+F++N K+ ++ + S+GG+ ND VH+ + +L
Sbjct: 379 ALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSL 416
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 215/413 (52%), Gaps = 11/413 (2%)
Query: 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
+++ K N + A+ SLF + + FA+ T G+R L+ L + + + + AL
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64 RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
+DL KP+ + E+ + I AL L W+ P + PS +V EP+GV
Sbjct: 75 AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 183
II P+NYP L+L P++GAI GN ++KPSE P +S+++ K++ E + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 184 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++ +L
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIV 302
+++ GK+ N+GQ CI+PD++ Y K L E ++V
Sbjct: 255 VNQLMFGKF-INSGQTCIAPDYL-----YVHYSVKDALLERLVERVKTELPEINSTGKLV 308
Query: 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 362
RL LL + G+++ G + D +K ++ T++ V + +MSEE+FGP+LP+
Sbjct: 309 TERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 363 LTVDKIEDSFDIIN-SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 414
L D + + D +N KPLA Y+F + + + + + +G +N +H
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLH 419
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 214/413 (51%), Gaps = 11/413 (2%)
Query: 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
+++ K N + A+ SLF + + FA+ T G+R L+ L + + + + AL
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64 RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
+DL KP+ + E+ + I AL L W+ P + PS +V EP+GV
Sbjct: 75 AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 183
II P+NYP L+L P++GAI GN ++KPSE P +S+++ K++ E + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 184 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++ +L
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIV 302
+++ GK+ N+GQ I+PD++ Y K L E ++V
Sbjct: 255 VNQLMFGKF-INSGQTXIAPDYL-----YVHYSVKDALLERLVERVKTELPEINSTGKLV 308
Query: 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 362
RL LL + G+++ G + D +K ++ T++ V + +MSEE+FGP+LP+
Sbjct: 309 TERQVQRLVSLL--EATQGQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 363 LTVDKIEDSFDIIN-SGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVH 414
L D + + D +N KPLA Y+F + + + + + +G +N +H
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLH 419
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 10/377 (2%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+++ + E++ V D KP + ++ ++ + + + + + +
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKP-FDEAVLDIDDVASCFEYFAGQAEALDGKQ 129
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
KA ++ + ++ +P GVV +ISPWNYP L++ + A+AAG VLKPSE+A
Sbjct: 130 KAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASV 189
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 217
+ ++ E + + ++ G + A L DKI +TG+S VMA+AA+
Sbjct: 190 TCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQ 249
Query: 218 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXX 277
+ PV LELGGKSP+V +++ I G + NGQ C + ++ + A
Sbjct: 250 LVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCF-WTNGQICSATSRLLVHESIAAEFV 308
Query: 278 XXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KN 332
+P E L +++ + ++ K + K G I++GG R K
Sbjct: 309 DKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKK 368
Query: 333 KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392
I PT++ D+ I EE+FGP+L + T +++ + N LAA +F+N+ +
Sbjct: 369 GYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLE 428
Query: 393 LKQQFVETVSAGGLVIN 409
++ + + G + +N
Sbjct: 429 RCERITKALEVGAVWVN 445
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 185/391 (47%), Gaps = 10/391 (2%)
Query: 27 RGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSI 86
R A T S R L+++ + E++P++ D KP L+ + +++ +
Sbjct: 60 RNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKP-LDEAAWDIDDVAGCF 118
Query: 87 KSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAA 146
+ + +KA S+ + ++ EP GVV +I+PWNYP L++ V A+AA
Sbjct: 119 EYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAA 178
Query: 147 GNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTG 203
G A +LKPSE+A + L ++ E + + ++ G E A L DK+ +TG
Sbjct: 179 GCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTG 238
Query: 204 NSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISP 263
+S +M AAA+ + PV LELGGKSP+V ++L A I G + NGQ C +
Sbjct: 239 SSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSAT 297
Query: 264 DHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG- 321
+I + A +PLE L +V+ + ++ K + + K G
Sbjct: 298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGA 357
Query: 322 KIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378
I+ GG R K I PT++ DV + I EE+FGP+L + T E++ D+ N
Sbjct: 358 TILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDT 417
Query: 379 TKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
L A + +N+ + ++ + AG + +N
Sbjct: 418 VYGLGAAVISNDLERCERVTKAFKAGIVWVN 448
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 177/383 (46%), Gaps = 22/383 (5%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESS--IYEVALLKTSIKSALKELKHWMT 98
R L+++ + ER+P++ D KP E++ + +VA + L
Sbjct: 91 RAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEAL----- 145
Query: 99 PEKAKTSITTFPSS---AEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+K + S + P + EP GVV +I+PWNYP L++ + A+AAG VLKPS
Sbjct: 146 -DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPS 204
Query: 156 EVAPASSSLLAKLVGEYMDLSSI-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 212
E+A + LA + E S + +V G + A L DK+ +TG+ + +M
Sbjct: 205 ELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIM 264
Query: 213 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK-WGCNNGQACISPDHIITTKD 271
A+AA + PV LELGGKSP+V +++ A + G W NGQ C + ++
Sbjct: 265 ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFW--TNGQICSATSRLLIHTK 322
Query: 272 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER 329
A +PLE L +V+ + ++ K + + K G I+ GG R
Sbjct: 323 IAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 382
Query: 330 D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
+ I PT++ D+ I EE+FGP+L + +++ ++ N LA +
Sbjct: 383 PAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAV 442
Query: 387 FTNNKKLKQQFVETVSAGGLVIN 409
+ +++ Q+ E + AG + +N
Sbjct: 443 ISGDRERCQRLSEEIDAGCIWVN 465
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 174/387 (44%), Gaps = 29/387 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW--MT 98
R++ L+ + + R + +AL D + L ++ E I S L + W +
Sbjct: 52 RITTLQQWKQAILSRREQLTEALVNDTGR--LSITVLE-------IDSFLASIDRWCGLA 102
Query: 99 PEKAKTSI--TTFPSSA---EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
PE +TS T+ P A +VP P +V +ISPWN+P LS + A+ AG A+V+K
Sbjct: 103 PELLQTSAKNTSIPFIALQQSLVPYP--LVGVISPWNFPLTLSXIDTIPALLAGCAVVVK 160
Query: 154 PSEVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQKWDKICYTGNSRVARIVM 212
PSE+AP + L + +L + + VEG ET A L D +C+TG+ R V
Sbjct: 161 PSEIAPRFVAPLLXALNTVPELRDVLIFVEGG-GETGANLINYVDFVCFTGSVATGREVA 219
Query: 213 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTK 270
AA+ P LELGGK P + NL++A ++ WG N GQ+C+S + I +
Sbjct: 220 ETAARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAE 276
Query: 271 DYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG-- 327
PL E + I+ ++ + D G ++H G
Sbjct: 277 SKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGK 336
Query: 328 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
E PT+ +V + +EE FGP+ P+ +E++ + N L+A +
Sbjct: 337 VEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAV 396
Query: 387 FTNNKKLKQQFVETVSAGGLVINDTAV 413
F ++ + ++AG + IND A+
Sbjct: 397 FAGSEDEALKVARQLNAGAISINDAAL 423
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV +I+PWNYP L+++ V A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 174 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
++ ++ G E L DKI +TG+ +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 290
VVFD NL +A + G + N GQ C + +I ++ A
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIF-ANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 291 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 345
+PLE L +V++ + ++ K + + K G I+ GGER K + PT++ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
I EE+FGP+L + T E + ++ N L A + + + K ++F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 406 LVIN 409
+ IN
Sbjct: 459 IWIN 462
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 186/390 (47%), Gaps = 38/390 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R + L ++ K + E++ ++ L D KP E+E SI L +K E +
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVK----EHR 113
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
+ P + T EP G+V I+P+N+P LS + AIA GN +V P
Sbjct: 114 DEVIPSDDRLIFTR--------REPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHP 165
Query: 155 SEVAPASSSLLAKLVGEYMD-----LSSIRVVEGA--VAETSALLDQKWDKICYTGNSRV 207
S AP LAK++ + L ++ GA V ++++K + I +TG+S+V
Sbjct: 166 SSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKV 225
Query: 208 ARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
++ A + LELGG +P + +L A +I G + GQ CIS I+
Sbjct: 226 GELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMIL 282
Query: 268 TTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLD---DDKVSGKI 323
+ A NPL+ K D+ +++ H + K+++ D+ GK+
Sbjct: 283 VDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDE--GGKL 340
Query: 324 VHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLA 383
+ GG+RD K PT +L+V RD+++ E F P++PI+ ++ E+ DI NS L
Sbjct: 341 LLGGKRD--KALFYPT-ILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLH 396
Query: 384 AYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
+ +FTN+ +F E + GG+VIND+++
Sbjct: 397 SAIFTNDINKSLKFAENLEFGGVVINDSSL 426
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 152/304 (50%), Gaps = 10/304 (3%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV +I+PWNYP L+++ V A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 174 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
++ ++ G E L DKI +TG+ +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 290
VVFD NL +A + G + N GQ C + +I ++ A
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIF-ANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKIS 338
Query: 291 NPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD---KNKLRIAPTLLLDVP 345
+PLE L +V++ + ++ K + + K G I+ GGER K + PT++ DV
Sbjct: 339 DPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVN 398
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
I EE+FGP+L + T E + ++ N L A + + + K ++F + G
Sbjct: 399 TSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGI 458
Query: 406 LVIN 409
+ IN
Sbjct: 459 IWIN 462
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 8/297 (2%)
Query: 120 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 176
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 177 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 296
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 297 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 352
D++ ++N+ R+ K+ + ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EE FGP+LP++ D +ED+ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN 438
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 8/297 (2%)
Query: 120 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 176
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 177 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 296
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 297 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 352
D++ ++N+ R+ K+ + ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EE FGP+LP++ D +ED+ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN 438
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 14/379 (3%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R L+++ + E++ ++ D KP LE ++ ++ + + + + +
Sbjct: 74 RARYLRAIAAKIKEKKDELGKLESIDCGKP-LEEALADLDDVVACFEYYAGLAEELDSKQ 132
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
KA S+ + I+ EP GVV +I+PWNYPFL++ + A+AAG A +LKPSE+A
Sbjct: 133 KAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASV 192
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAK 217
+ L ++ E + + +V G E A L DKI +TG+S +M AA+
Sbjct: 193 TCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQ 252
Query: 218 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTKDYAPX 275
+ PV LELGGKSP+V ++L + GC NGQ C + +I + A
Sbjct: 253 LVKPVSLELGGKSPIVVFEDVDLDKVAEWTVF---GCFFTNGQICSATSRLIVHESIAVE 309
Query: 276 XXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKL 334
+PLE L IV+ + ++ + K G + G R L
Sbjct: 310 FVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHL 369
Query: 335 R----IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ + PT++ DV I EE+FGP+L + T E++ ++ N L + + +N+
Sbjct: 370 KKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSND 429
Query: 391 KKLKQQFVETVSAGGLVIN 409
+ ++ + + AG + IN
Sbjct: 430 LERCERLSKALQAGIVWIN 448
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 8/297 (2%)
Query: 120 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 176
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 177 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 296
+L++A + ++ + N+GQ C + + K NP E
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321
Query: 297 DLSR--IVNSNHFARL-SKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRDSLIMS 352
D++ ++N+ R+ K+ + ++ GG+ + K PTLLLDV ++ IM
Sbjct: 322 DIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMH 381
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EE FGP+LP++ D +E++ + N L + ++T N + + ++ + G IN
Sbjct: 382 EETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN 438
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 14/308 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I WNYPF+++ A+A GNA+V KPS + P + +LA++ E + +
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ VV+G AET +LL + K+ +TG+ + VM +AK + V LELGGKSP++
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 294
L+ A R +M + GQ C + + ++ P +PL
Sbjct: 273 FKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331
Query: 295 SKD-LSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE-------RDKNKLRIAPTLLLDVP 345
++ + +++ ++ + K G +++ GGE + KN ++P +L +
Sbjct: 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGG 405
D + EEIFGP++ +L D E+ N+ T LA+ +FT + + + AG
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 406 LVINDTAV 413
IN ++
Sbjct: 452 CYINTYSI 459
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 156/311 (50%), Gaps = 13/311 (4%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
+ ++IV EP GVV I+PWNYP L + + A+A G +LV+KPSE+ P ++ + +L+
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 171 EY-MDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
E +I ++ GA +E ++ ++ D + +TG + +M AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 228 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXX 286
GK+P ++FD + ++A + + G + + GQ C + I+
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK 339
Query: 287 FYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLR----IAPT 339
N ++ ++ ++++ H ++ +D K G I GG+R D++ L+ PT
Sbjct: 340 IKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPT 399
Query: 340 LLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVE 399
++ + I+ EE+FGP++ + + +++ + N LA +F+ + Q+
Sbjct: 400 VITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVAN 459
Query: 400 TVSAGGLVIND 410
+ G + IND
Sbjct: 460 KLKLGTVWIND 470
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 170/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 170/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 170/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 49 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 104
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 105 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 160
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 161 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 220
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 221 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 280
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ C + +D NP +SK + V
Sbjct: 281 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 339
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 340 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 399
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 400 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 448
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 170/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 171/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V L+LGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ+C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 169/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ + G++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ C + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 8/302 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV II+PWN+PF+++ + V AI +G +VLKPSE +S LA+L E +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 174 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
VV G +L D D + +TG+ RV + AA+ + V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 291
+ + +L A + G + N GQ CIS ++ + +
Sbjct: 277 QIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 292 PL-ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER--DKNKLRIAPTLLLDVPRD 347
PL E + ++ H ++ + SG +++ GGER + L APT+ V D
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPD 395
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
I EEIFGP+L LT +++ + N+ L+A +++ N + Q + + AG
Sbjct: 396 XSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455
Query: 408 IN 409
IN
Sbjct: 456 IN 457
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 12/303 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+L A +M + ++GQ C + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 346
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 407 VIN 409
IN
Sbjct: 440 WIN 442
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 12/303 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+L A +M + ++GQ C + + + +P
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 346
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 407 VIN 409
IN
Sbjct: 439 WIN 441
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 161/392 (41%), Gaps = 44/392 (11%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + + + +KML ER+ L + +P + E HWM
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQP-----------------PTIIETMHWM--- 111
Query: 101 KAKTSITTFPSSAEIVP----------------EPFGVVLIISPWNYPFLLSLDPVVGAI 144
+ ++ F +A+ V EP GVV I WN P L+++ + A+
Sbjct: 112 GSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPAL 171
Query: 145 AAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-DQKWDKICYT 202
AG +VLKP+ P +++ LA++ E + + VV G + AL + D +T
Sbjct: 172 LAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFT 231
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+S V R V AA+ L P LELGGKS + ++L A M+ N GQ C++
Sbjct: 232 GSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVN 290
Query: 263 PDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG 321
I+ + Y G + + +++ R+ + G
Sbjct: 291 QTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEG 350
Query: 322 -KIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS 377
++V GG R + N I PT+ DV I EEIFGP+L I+ D ED+ I N
Sbjct: 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAND 410
Query: 378 GTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
LA ++T + + + + G IN
Sbjct: 411 SVYGLAGSVWTTDVPKGIKISQQIRTGTYGIN 442
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 12/310 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GV + ISPWN+ + + V I GN +VLKP+ P ++ +++ + +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 178 IRVVEGAVAETS-ALLDQ-KWDKICYTGNSRVA-RIVMAAAA-----KHLTPVLLELGGK 229
I V G+ AE L+D K I +TG+ V R+ AA HL V++E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYG 289
VV D +L +A +++ +G +GQ C + + KD
Sbjct: 292 DTVVVDRDADLDLAAESILVSAFGF-SGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350
Query: 290 KNPLESKD-LSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLLDVPRD 347
+P + + +++ F ++ ++ K G+++ GGE D + I PT++ D+ +
Sbjct: 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPE 410
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
++IM EEIFGP++ + + + +I N+ L + T N+ +Q G L
Sbjct: 411 AVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470
Query: 408 INDTAVHVIM 417
N I+
Sbjct: 471 FNRNCTGAIV 480
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 169/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 169/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 165/383 (43%), Gaps = 16/383 (4%)
Query: 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98
GWR+ K +L R D+V A DL +A K I A ++ W
Sbjct: 65 GWRMKTAKERAAILR-RWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIE-WFA 122
Query: 99 PEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
E + + T P+ +V EP GV I+PWN+P + V A+AAG +V+K
Sbjct: 123 EEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVK 182
Query: 154 PSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 210
P+E P S+ + LA+ G + S+ + + T + K+ +TG++ V R+
Sbjct: 183 PAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRL 242
Query: 211 VMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IIT 268
+MA +A + + LELGG +P +VFD +L A I K+ NNGQ C+ + +
Sbjct: 243 LMAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKY-RNNGQTCVCTNRFFVH 300
Query: 269 TKDYAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG 327
+ Y G+ L ++N ++ + D G ++ GG
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 328 ERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386
+R PT+L V D + EE FGPL P+ E+ + N LAAYL
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYL 420
Query: 387 FTNNKKLKQQFVETVSAGGLVIN 409
++ + + E + G + IN
Sbjct: 421 YSRDIGRVWRVAEALEYGMVGIN 443
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 9/280 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
+P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 158 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGV 217
Query: 178 IRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV-VF 234
+ ++ G L K + TG+ +++ A + +ELGGK+PV VF
Sbjct: 218 VNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVF 277
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPL 293
D V G + N GQ C + I K Y G
Sbjct: 278 DDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 335
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG--KIVHGGERDK-NKLRIAPTLLLDVPRDSLI 350
ES +L + + H R+ K +++ K +G K++ GGE+ K N APTLL +D I
Sbjct: 336 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAI 395
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ +E+FGP++ + D E + N LA+ ++T +
Sbjct: 396 VQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKD 435
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 165/382 (43%), Gaps = 20/382 (5%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTP 99
R + L ++K R+ DIV A+ +L P L ++ L + +A L ++
Sbjct: 69 RQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFV-AARDALDNYEFE 127
Query: 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159
E+ + +V E GV +I+PWN+P + + A AAG+ +VLKPSE P
Sbjct: 128 ERRGDDL--------VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 160 ASSSLLAKL---VGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAA 216
++ +LA++ VG + ++ +GA K +TG+ + AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA 239
Query: 217 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXX 276
K V LELGGKSP + +++K A + GK N GQ C + ++
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAK-ATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 277 XXXXXXXXXXFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKL 334
NP E + I++ F ++ ++ G ++ +GG L
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 335 RIA----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
PT+ ++V I EEIFGP+ ++T + ++++ I N LA Y+ +
Sbjct: 359 EKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKD 418
Query: 391 KKLKQQFVETVSAGGLVINDTA 412
K+ + ++ AG + IN+
Sbjct: 419 KETLHKVARSIEAGTVEINEAG 440
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 169/409 (41%), Gaps = 23/409 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK-DLSRIV 302
+ + N GQ + +D NP +SK + V
Sbjct: 287 VEQAHFALF-FNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
Query: 303 NSNHFARLSKLLDDDKVSGK--IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLL 360
+ F ++ ++ K G + GG I PT+ DV I EEIFGP++
Sbjct: 346 DETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVM 405
Query: 361 PILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
IL IE+ N+ T LAA +FT + + + AG + +N
Sbjct: 406 QILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVN 454
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 173/388 (44%), Gaps = 31/388 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R S L+ ++ + + D+ + + KP E+ S + + + ++
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
H TP K + ++ ++ +P GV +I+PWN+P + V A+AAG +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 155 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 207
+E P S+ LA+L G Y + R V E + D KI +TG++
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 208 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
+I++ AA + V +ELGG +P +VFDS N+ A + K+ N GQ C+ +
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQF 298
Query: 267 ITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK-I 323
+ + A G E ++N ++ K ++D G +
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 324 VHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
V GG+R + K PTLL +V +D L EE FGPL P++ D E++ I N+ L
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVIND 410
A Y ++ + + E + G + +N+
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNE 446
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V + LGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+L A +M + ++GQ C + + + +P
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 346
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 379 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 438
Query: 407 VIN 409
IN
Sbjct: 439 WIN 441
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 11/301 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GVV+ I+ WN+P L+ + A+ GN +VLKP++ P +++ L ++ E +
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 178 IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ V+ G + L + I TG++ + + +A+++TPV+LELGGK+P+V
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVM 267
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLES 295
+L A + G++ N GQ C + + +P+++
Sbjct: 268 DDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDA 326
Query: 296 -KDLSRIVNSNHFARLSKLLDDDKVSGKIVHGG------ERDKNKLRIAPTLLLDVPRDS 348
+ N + ++ + G V G E + PT+L+DV +D+
Sbjct: 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDN 386
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408
+++ EE FGP+LPI+ V +E + + N L+AY+ T + Q + + G + I
Sbjct: 387 IVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYI 446
Query: 409 N 409
N
Sbjct: 447 N 447
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 20/319 (6%)
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172
+ V P GV ++I PWN+ F + V I GN +VLKP+ AP ++ +++ E
Sbjct: 167 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESG 226
Query: 173 MDLSSIRVVEGAVAETS-ALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLL 224
+ + V G+ AE L+D K I +TG+ V + AAK HL V+
Sbjct: 227 LPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIA 286
Query: 225 ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPXXXXXXXXX 283
E+GGK VV D ++++A + + +G GQ C + ++ K Y
Sbjct: 287 EMGGKDTVVVDEDCDIELAAQSIFTSAFGF-AGQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 284 XXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNK-LRIAPTLLL 342
G+ + +++ F ++ ++ K G++V GG+ D +K I PT+
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGRLVSGGKGDDSKGYFIEPTIFA 405
Query: 343 DVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK----KLKQQFV 398
D+ + +M EEIFGP++ V +++ ++ N+ L + T N+ + KQ+F
Sbjct: 406 DLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEF- 464
Query: 399 ETVSAGGLVINDTAVHVIM 417
G L N I+
Sbjct: 465 ---HVGNLYFNRNCTGAIV 480
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 171/402 (42%), Gaps = 25/402 (6%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DLDKPELESS 75
VK R F G WR ++LN ER+ + AL D KP + S
Sbjct: 62 VKAARAAFQLGSP----WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISY 117
Query: 76 IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLL 135
+ ++ + + L+ W KT + EP GV I PWN+P L+
Sbjct: 118 LVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 173
Query: 136 SLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-- 192
+ A+A GN +V+K +E P ++ +A L+ E + V+ G A +
Sbjct: 174 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIAS 233
Query: 193 DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
+ DK+ +TG++ V ++ AA K +L V LE+GGKSP + S ++ A +
Sbjct: 234 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFAL 293
Query: 252 WGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFAR 309
+ N GQ C + +D YA G NP +S+ + V+ F +
Sbjct: 294 F-FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG-NPFDSRTEQGPQVDETQFKK 351
Query: 310 LSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK 367
+ + K G K++ GG ++ I PT+ D+ I EEIFGP++ IL
Sbjct: 352 VLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKS 411
Query: 368 IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+E+ N+ LAA +FT + + + AG + +N
Sbjct: 412 MEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVN 453
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 184/407 (45%), Gaps = 37/407 (9%)
Query: 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVD--- 61
EE + E D E VK R F G WR ++LN + D+++
Sbjct: 46 EEKLCEVEEGDKEDVDKAVKAARQAFQIGSP----WRTMDASERGRLLN-KLADLIERDR 100
Query: 62 ---ALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT-----SITTFPSSA 113
A + ++ +L S+ Y + L IK+ L+ W + +T + T+ S
Sbjct: 101 LLLATMEAMNGGKLFSNAY-LMDLGGCIKT-LRYCAGWADKIQGRTIPMDGNFFTYTRS- 157
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172
EP GV I PWN+P L+ L + A++ GN +V+KP+E P ++ + L+ E
Sbjct: 158 ----EPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213
Query: 173 MDLSSIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELG 227
+ +V G A A S+ +D DK+ +TG++ V +++ AA K +L V LELG
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELG 271
Query: 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXF 287
GKSP + + +L A G + + GQ CI+ + + +
Sbjct: 272 GKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 288 YGKNPLESKDLSR--IVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLD 343
NPL + +S+ ++ + ++ L++ K G K+ GG NK I PT+ D
Sbjct: 331 VLGNPL-TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSD 389
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
V D I EEIFGP+ I+ ++D N+ L+A +FTN+
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTND 436
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+L A +M + ++GQ + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 346
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 407 VIN 409
IN
Sbjct: 440 WIN 442
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+L A +M + ++GQ + + + +P
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 294 -ESKDLSRIVNSNHFARLSKLLDDDKVS-GKIVHGGERDKN-----KLRIAPTLLLDVPR 346
E+ + +V+ H + ++ K +++ GGER + +APT+ D
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I+ EEIFGP++ IL D +++ N LAA + T + + + + AG
Sbjct: 380 DMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGIC 439
Query: 407 VIN 409
IN
Sbjct: 440 WIN 442
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 11/300 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GV + I WNYP ++ A+ AGNA+V KPSE P + +A+++ E +
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 178 IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
V++G +T LL D K+ TG+ R V AAAA HL V +ELGGKSP++
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE- 294
+++ A ++G + ++GQ C + + K +PL+
Sbjct: 269 DDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDY 327
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKVSGK-IVHGGERDKN----KLRIAPTLLLDVPRDSL 349
+ L +V+ ++ ++ K G ++ GG N + PT+ DV D
Sbjct: 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMT 387
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
I EEIFGP++ +L D ++ N+ LA +FT + + V+ + AG L IN
Sbjct: 388 IAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWIN 447
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 33/367 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L++ ++ E + D+ + + KP L + E++ + I+ W E
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ T P ++ +P GV I+PWN+P + A+AAG +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 156 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 212
P S+ LA+L + + VV G+ L K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 213 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKF-RNAGQTCVCANRLYVQDG 299
Query: 272 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 327
+ + L++ + +++ A++ + + D G ++V GG
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359
Query: 328 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLA 383
ER N + PT+L+DVP ++ + EE FGPL P+ + +D D+I N LA
Sbjct: 360 HERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLA 414
Query: 384 AYLFTNN 390
AY + +
Sbjct: 415 AYFYARD 421
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 163/367 (44%), Gaps = 33/367 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L++ ++ E + D+ + + KP L + E++ + I+ W E
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ T P ++ +P GV I+PWN+P + A+AAG +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 156 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 212
P S+ LA+L + + VV G+ L K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 213 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKF-RNAGQTCVCANRLYVQDG 299
Query: 272 YAPXXXXXXXXXXXXFYGKNPLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGG-- 327
+ + L++ + +++ A++ + + D G ++V GG
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA 359
Query: 328 -ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDII---NSGTKPLA 383
ER N + PT+L+DVP ++ + EE FGPL P+ + +D D+I N LA
Sbjct: 360 HERGGNFFQ--PTILVDVPANAKVSKEETFGPLAPLF---RFKDEADVIAQANDTEFGLA 414
Query: 384 AYLFTNN 390
AY + +
Sbjct: 415 AYFYARD 421
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 172/388 (44%), Gaps = 31/388 (7%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R S L+ ++ + + D+ + + KP E+ S + + + ++
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
H TP K + ++ ++ +P GV +I+PWN+P + V A+AAG +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 155 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 207
+E P S+ LA+L G Y + R V E + D KI +TG++
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 208 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
+I++ AA + V +ELGG +P +VFDS N+ A + K+ N GQ + +
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQF 298
Query: 267 ITTKDY--APXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK-I 323
+ + A G E ++N ++ K ++D G +
Sbjct: 299 LVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATV 358
Query: 324 VHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
V GG+R + K PTLL +V +D L EE FGPL P++ D E++ I N+ L
Sbjct: 359 VTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 383 AAYLFTNNKKLKQQFVETVSAGGLVIND 410
A Y ++ + + E + G + +N+
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNE 446
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 7/296 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 294
+L++ + +I G +G +GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 354
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 355 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN 433
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL--S 176
P G V II+PWN P +LS + A+A GN +VLKP+E +P +++ LA+++ E DL
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKE-ADLPPG 220
Query: 177 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+V+G E A L + TG + +IVM AA HL + ELGGKSP +
Sbjct: 221 VFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALV 280
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 294
+ +L+ A ++ + NG+ C + ++ + +PL+
Sbjct: 281 FADADLERALDAVVFQIFSF-NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 295 SK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLR---------IAPTLLLD 343
+ ++ +++ H R+ ++ K G +++ GGER K R + PT+ +
Sbjct: 340 PETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG 399
Query: 344 VPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EEIFGP+L + E++ N LAAY+FT + + + + A
Sbjct: 400 -ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEA 458
Query: 404 GGLVINDTAV 413
G + +N V
Sbjct: 459 GMVYLNSHNV 468
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 7/296 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I ++G++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 294
+L++ + +I G +G +GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 354
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 355 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN 433
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 22/336 (6%)
Query: 95 HWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
W E + T P+ ++ +P GV I+PWN+P + A+AAG
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198
Query: 150 LVLKPSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGN 204
++++P+++ P ++ +LA+ G + +++V G E A L + K+ +TG+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAG--IPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256
Query: 205 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 264
+ V R++MA A + + LELGG +P + +L A ++ K+ N GQ C+ +
Sbjct: 257 TEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCAN 315
Query: 265 HIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-K 322
I + Y G + ++ ++ ++D G K
Sbjct: 316 RIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAK 375
Query: 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPL 382
++ GG ++ L P +L V D L+ EE FGPL P+ D E+ N L
Sbjct: 376 LITGG-KELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 383 AAYLFTNNKKLKQQFVETVSAG------GLVINDTA 412
AAY +T N + E + G GL+ N+ A
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVA 470
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 7/296 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I +TG++ + + A + P++L LGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 294
+L++ + +I G +G +GQ C + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 354
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 355 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN 433
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 8/299 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM---D 174
EP GV I PWN+P L+ + A+ GN +V+KP+E P S+ + L+ E
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 233
+ +I G A + DKI +TG++ V +++ AA + +L V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 292
+ +L A + G + N GQ C + I + Y G
Sbjct: 276 IFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPF 334
Query: 293 LESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLI 350
+ + ++ + ++ +L+ G K+ GG+ + I PT+ +V D I
Sbjct: 335 DPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRI 394
Query: 351 MSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
EEIFGP+ IL +++ + N+ L A +FTN+ + AG + IN
Sbjct: 395 AKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTVWIN 453
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 12/301 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV +I PWN P +L + A+ GN +++KP+E P ++ +A L+ E
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPG 217
Query: 177 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 231
+ +V G A A S+ +D DK+ +TG++ V +++ AAAK +L V LELG K+P
Sbjct: 218 VVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNP 275
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKN 291
+ + +L A G + N GQ+CI+ + + + N
Sbjct: 276 CIVFADADLDSAVEFAHQGVF-TNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGN 334
Query: 292 PLESK-DLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNK-LRIAPTLLLDVPRDS 348
PL + +N ++ +L++ K G K+ GG NK I PT+ +V D
Sbjct: 335 PLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDM 394
Query: 349 LIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVI 408
I EEIFGP+ I+ +++ N+ L A +FT + + AG + +
Sbjct: 395 RIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454
Query: 409 N 409
N
Sbjct: 455 N 455
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 177/395 (44%), Gaps = 27/395 (6%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F + KT S R+ ++ ++++ +R D+ + ++ P + + A + I++
Sbjct: 76 FQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNF 135
Query: 90 LKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
+K K + E ++ A + + GVV +I+PWN+P V+ A+ AG
Sbjct: 136 IKAYKEFSFQE----ALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCT 191
Query: 150 LVLKPSEVAPASSSLLAKLVGEYMDLSSI-RVVEGAVAETSALLDQKWD--KICYTGNSR 206
+VLKPSE+AP S+ L A+++ E S + ++ G A + L D I +TG++R
Sbjct: 192 MVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTR 251
Query: 207 VARIVMAAAAKHLTPVLLELGGKSP-VVF-DSGIN-LKVACRRMIMGKWGCNNGQACISP 263
+ + A+ L V LELGGK ++F D+ I+ L+ R N+GQ+C +P
Sbjct: 252 AGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCFY-----NSGQSCNAP 306
Query: 264 DHIITTKD-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG- 321
++ + Y G + +V+ + ++ L+ G
Sbjct: 307 TRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGA 366
Query: 322 KIVHGG-------ERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDI 374
+V GG ER + PT+ DV I EEIFGP+L +L + +++ +
Sbjct: 367 TLVTGGTGLPMGMERG---YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTL 423
Query: 375 INSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
N L Y+ + ++ ++ V +G + +N
Sbjct: 424 ANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVN 458
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 7/296 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLE 294
+L++ + +I G +G +GQ + ++ + A NP +
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRSTAVKRVLVMESVADELVEKIREKVLALTIGNPED 318
Query: 295 SKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEE 354
D++ ++++ + L++D G + + L I P L V D + EE
Sbjct: 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNL-ICPILFDKVTTDMRLAWEE 377
Query: 355 IFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIND 410
FGP+LPI+ V +E++ +I N L A +FTN+ E + G + IN+
Sbjct: 378 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINN 433
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 18/359 (5%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
RV L + +L ER+ I + + ++ KP+ +S+I EV+ I+ E + E
Sbjct: 73 RVDLLYAWADLLEERKEIIGELIMHEVAKPK-KSAIGEVSRTADIIRHTADEALR-LNGE 130
Query: 101 KAKTSITTFPSSAEIV---PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEV 157
K SS +I EP GVVL ISP+NYP L+ + A+ GN +V KP+
Sbjct: 131 TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQ 190
Query: 158 APASSSLLAKLVGEYMDLSS----IRVV--EGAVAETSALLDQKWDKICYTGNSRVARIV 211
S K+V D + I+VV G+V + D I +TG + +
Sbjct: 191 GSLSG---IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247
Query: 212 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
A + PV+LELGGK P + +LK+ +++ G + +GQ C + +
Sbjct: 248 SEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDS 304
Query: 272 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK 331
A +P + D++ +++ A + L+DD +G + G + +
Sbjct: 305 VADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQ 364
Query: 332 NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
L ++PTLL DV + EE FGP+LPI+ V ++ + N L A +FT +
Sbjct: 365 GNL-LSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKD 422
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 137/303 (45%), Gaps = 15/303 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 228
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 287
K+ ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAYGF-QGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 346
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 407 VIN 409
N
Sbjct: 470 YFN 472
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 15/303 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 228
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 287
K ++ D + +A +++ +G GQ C + +I T+ Y P
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGF-QGQKCSAASRLILTQGAYEPVLERVLKRAERLS 350
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPR 346
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 351 VGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469
Query: 407 VIN 409
N
Sbjct: 470 YFN 472
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 133/302 (44%), Gaps = 13/302 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 228
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFY 288
K ++ D + +A +++ +G + + I+T Y P
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSV 351
Query: 289 GKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRD 347
G E+ DL +V++ ++ ++ K G++V GG+R + IAPT+ +VP
Sbjct: 352 GPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPK 410
Query: 348 SLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLV 407
+ I EEIFGP+L ++ V ++ ++ N L +++ ++ + G L
Sbjct: 411 ARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470
Query: 408 IN 409
N
Sbjct: 471 FN 472
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 20/306 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 294 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 345
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 346 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 404 GGLVIN 409
G + IN
Sbjct: 471 GTVFIN 476
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 172/386 (44%), Gaps = 24/386 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+ L+E DI+ + ++ ++S+I ++ + L MT
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI--------ELEQTIAILDEAMTYT 119
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ PS E I P GV+ ISP+N+P LS+ + AIA GN++V KP
Sbjct: 120 GELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 156 -EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETS-ALLDQKWDK-ICYTGNSRVARI 210
+ A + +++AK E+ L + + V+ V E +L + I +TG++ V R
Sbjct: 180 IQTAISGGTIIAKAF-EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH 238
Query: 211 VMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
+ A + + LELGG +P S ++ A I GK+ + GQ C+ + II +
Sbjct: 239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQ 297
Query: 271 D-YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGE 328
D Y YG + ++N + ++++ K G ++ G+
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357
Query: 329 RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFT 388
R N L P + + +S I E+F P+ I+ +++ D+ N L++ +FT
Sbjct: 358 RVGNVL--TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415
Query: 389 NNKKLKQQFVETVSAGGLVINDTAVH 414
++ + ++F + +G +ND +V+
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVN 441
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--I 178
GVV +ISPWN+P LS+ V A+A GNA+V+KP+ P + ++ + E + + I
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 179 RVVEGAVAETS-ALLDQKWDK-ICYTGNSRVARIV--MAAAAKHLTPVLLELGGKSPVVF 234
V GA +E + K I +TG++ V R V +A + V LELGG +P V
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVV 269
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP-L 293
+ ++ A + +G + + GQ C+S + +I +P
Sbjct: 270 LADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSA 328
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSE 353
E + ++N + + L + ++ K G V + +L + P + DV D I E
Sbjct: 329 EGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRL-VHPHVFSDVTSDMEIARE 387
Query: 354 EIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAV 413
EIFGPL+ +L D + ++ N+ L+A +++ + QF + +G + IND V
Sbjct: 388 EIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTV 447
Query: 414 H---VIMLALLKNHTLLR 428
+ +M KN L R
Sbjct: 448 NDEPHVMFGGSKNSGLGR 465
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 20/306 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L+LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 294 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 345
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 346 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 404 GGLVIN 409
G + IN
Sbjct: 471 GTVFIN 476
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 19/297 (6%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
P++ E +P +P G+V I+PWNYP + AI GN +V KPSE P +
Sbjct: 144 PAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 162 SSLLAKLVGEYMDLSSIRVVEGAVAET--SALLDQ-KWDKICYTGNSRVARIVMAAAAKH 218
+ LA+L+ + + + V+ G ET +AL++ K + TG+ + V+AAAAK
Sbjct: 204 ALKLARLIADILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 219 LTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTKD-YAPXX 276
+ LELGGK+PV+ +L+ + G + N GQ C + I Y
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEAGIYEKLV 320
Query: 277 XXXXXXXXXXFYGKNPLESKDLSRIVNSNHFARLSKLLDD--DKVSGKIVHGGERDKNK- 333
Y + ++ +++ R++ ++ D+ +I GG ++
Sbjct: 321 ADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEG 380
Query: 334 LRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
PT++ ++ I+ E+FGP++ + +D+ N LA+ ++T +
Sbjct: 381 FFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKD 437
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 156/390 (40%), Gaps = 21/390 (5%)
Query: 30 FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSA 89
F K S R L+ + + L + + ++ KP ++ + EV KSA
Sbjct: 42 FKKWKXTSVAQRAQTLRDIGQALRAHAEEXAQCITREXGKP-IKQARAEV------TKSA 94
Query: 90 LKELKHWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAI 144
L W E + P+ E I P GV+L I PWN+P L V +
Sbjct: 95 --ALCDWYA-EHGPAXLNPEPTLVENQQAVIEYRPLGVILAIXPWNFPLWQVLRGAVPIL 151
Query: 145 AAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAE--TSALLDQKWDKICYT 202
AGN+ +LK + + +A+++ E + + A E + + D + + T
Sbjct: 152 LAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWVNANNEGVSQXINDPRIAAVTVT 211
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+ R + A A L +LELGG P + + +L++A + + G++ N GQ C +
Sbjct: 212 GSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQ-NTGQVCAA 270
Query: 263 PDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSG 321
I + A +PL E DL + L + + G
Sbjct: 271 AKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEG 330
Query: 322 -KIVHGGERDKNKLR-IAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379
+++ GGE+ + A T+L DV D +E+FGP+ I + + N
Sbjct: 331 ARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSE 390
Query: 380 KPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
L+A +FT + L + + GG+ IN
Sbjct: 391 FGLSATIFTADDTLAAEXAARLECGGVFIN 420
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 136/303 (44%), Gaps = 14/303 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+ +L A +M M N G+ CI+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 294 ESKDLSRIVNSNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDS 348
E +D + NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-RDTNH-GPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 349 LIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
I EE FGP++ I ++ N+ LA+ +FT + + + AG +
Sbjct: 414 YIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTV 473
Query: 407 VIN 409
IN
Sbjct: 474 FIN 476
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 20/306 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 294 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 345
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 346 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 404 GGLVIN 409
G + IN
Sbjct: 471 GTVFIN 476
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 20/306 (6%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 294 ESKDLSRIVN---SNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVP 345
E R N NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-----RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
Query: 346 RDSLIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSA 403
I EE FGP++ I ++ N+ LA+ +FT + + + A
Sbjct: 411 DHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA 470
Query: 404 GGLVIN 409
G + IN
Sbjct: 471 GTVFIN 476
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 14/303 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL 293
+ +L A +M M N G+ I+ + + NPL
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 294 ESKDLSRIVNSNHFARLSKLLD----DDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDS 348
E +D + NH A L KL++ K +V GG + + PT+ DV
Sbjct: 356 E-RDTNH-GPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHM 413
Query: 349 LIMSEEIFGPLLPI--LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
I EE FGP++ I ++ N+ LA+ +FT + + + AG +
Sbjct: 414 YIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTV 473
Query: 407 VIN 409
IN
Sbjct: 474 FIN 476
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 149/366 (40%), Gaps = 18/366 (4%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP--ELESSIYEVALLKTSIKSALKELKHWMT 98
R L+ + L E +I L + KP E + + A + L
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTI 132
Query: 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158
PEK K T + P GV +I PWN+P + A+AAG V+KP+
Sbjct: 133 PEKPKDCTWT------VHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASET 186
Query: 159 PASSSLLAKLVGEYMDL--SSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAA 214
P + V + +DL + +V G + +L + D + +TG++ V R ++
Sbjct: 187 PLTXIAFFS-VXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVD 245
Query: 215 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 274
A+ + + LELGG +P + +L+ A +I K+ GQ C+ + I + A
Sbjct: 246 TAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVAD 304
Query: 275 XXXXXXXXXXXXF-YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDK-- 331
G + D+ ++N F ++ + L D G + G++
Sbjct: 305 AFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAEL 364
Query: 332 -NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
+ L PT++ V R+ EE FGPL+P E+ D N LA+Y+FT +
Sbjct: 365 GDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTAD 424
Query: 391 KKLKQQ 396
+ Q+
Sbjct: 425 AERAQR 430
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 22/384 (5%)
Query: 40 WRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL---KTSIKSALKELKHW 96
WR + S ++L+ DI +AL++ D+ ++ LL K ++ + ++
Sbjct: 42 WRHEEPASRAEILH----DIANALKEHEDELAKXXTLEXGKLLSESKEEVELCVSICNYY 97
Query: 97 MT--PEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
PE K T + + +A + + GV+ PWN+P + GN ++LK
Sbjct: 98 ADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLK 157
Query: 154 PSEVAPASSSLLAKLVGEYM--DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIV 211
+ P S++L AK++ + S I + + D + + TG+ R V
Sbjct: 158 HAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAV 217
Query: 212 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
AA K+L ELGG + + +V R ++ N+GQ C S II K
Sbjct: 218 AEAAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEKS 276
Query: 272 YAPXXXXXXXXXXXXFYGKNPLESKDLSRIVNSNHF-----ARLSKLLDDDKVSGKIVHG 326
+PLE+ NS A++ + +D K+ +
Sbjct: 277 RYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAID---AGAKVFYQ 333
Query: 327 -GERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAY 385
E D PT+L D+ +D+ + +E+FGP+ + V+ + + N + L +
Sbjct: 334 YPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSS 393
Query: 386 LFTNNKKLKQQFVETVSAGGLVIN 409
+ ++ ++ + G VIN
Sbjct: 394 VIGSDIDRAKKVSAQIETGXTVIN 417
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 174
EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K + G D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 233
++ + G AE + D + + +TG++ V R+V K ++ELGG P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 292
+L +A ++ G + GQ C + ++ + Y G
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 293 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 349
+ D+ +++ + + ++D G V G R + PTL+ D +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMV 390
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+ E+F P+ + V ++ + ++ N L A +F + ++ V + G + IN
Sbjct: 391 LYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 410 DTAVHVI 416
D H I
Sbjct: 451 DMPRHGI 457
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 174
EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K + G D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 233
++ + G AE + D + + +TG++ V R+V K ++ELGG P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 292
+L +A ++ G + GQ C + ++ + Y G
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 293 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 349
+ D+ +++ + + ++D G V G R + PTL+ D +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMV 390
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+ E+F P+ + V ++ + ++ N L A +F + ++ V + G + IN
Sbjct: 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 410 DTAVHVI 416
D H I
Sbjct: 451 DMPRHGI 457
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 7/297 (2%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GVV I+P+N+P ++ AIA GN +LKPSE P + L +L + +
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 178 IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
VV GA + +L+ K I + G+ V V +++L V G K+ + +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPLESK 296
NL+ ++ +G + G+ C++ + + A N L+
Sbjct: 261 DANLEDTVTNIVGAAFG-SAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDG 319
Query: 297 -DLSRIVNSNHFAR-LSKLLDDDKVSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMS 352
L ++ ++ R LS + + ++V G + + + PT+ +V + I
Sbjct: 320 VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWK 379
Query: 353 EEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+EIF P+L ++ V ++++ +I N A LFT+N + F E + AG L IN
Sbjct: 380 DEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGIN 436
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 132/307 (42%), Gaps = 13/307 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV---GEYMD 174
EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K + G D
Sbjct: 156 EPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVLLELGGKSPVV 233
++ + G AE + D + + +TG++ V R+V K ++ELGG P +
Sbjct: 216 AIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---VMELGGGDPAI 271
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXFYGKNP 292
+L +A ++ G + GQ C + ++ + Y G
Sbjct: 272 VLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 293 LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLL---LDVPRDSL 349
+ D+ +++ + + ++D G V G R + PT + D +D +
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMV 390
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409
+ E+F P+ + V ++ + ++ N L A +F + ++ V + G + IN
Sbjct: 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYIN 450
Query: 410 DTAVHVI 416
D H I
Sbjct: 451 DMPRHGI 457
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 161/402 (40%), Gaps = 23/402 (5%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DA V R F + + R+ L+ L R ++ + ++ KP ES
Sbjct: 40 DATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWES 99
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFP---SSAEIVPEPFGVVLIISPWNY 131
+ T + S + ++ + + +T + P ++A + +P GVV + P+N+
Sbjct: 100 A--------TEVTSXVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNF 151
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL-LAKLVGEYMDLSSIRVVEGAVAETSA 190
P L +V A+ AGN +V KPSE+ P + L L + + + +V+G A
Sbjct: 152 PGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVA 211
Query: 191 LLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVL-LELGGKSPVVFDSGINLKVACRRMI 248
L + D + +TG+SR ++ + +L LE GG +P+V + +L A +I
Sbjct: 212 LAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVYTII 271
Query: 249 MGKWGCNNGQACISPDHIITTKD------YAPXXXXXXXXXXXXFYGKNPLESKDLSRIV 302
+ + GQ C ++ + A F + + +
Sbjct: 272 QSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFXGAVISLS 330
Query: 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPI 362
+ H + + L + D L + P +LDV + EE FGPLL +
Sbjct: 331 AAEHLLKAQEHLIGKGAQPLLAXTQPIDGAAL-LTPG-ILDVSAVAERPDEEFFGPLLQV 388
Query: 363 LTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAG 404
+ + N+ LAA L +++++ +QF+ AG
Sbjct: 389 IRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAG 430
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 121/281 (43%), Gaps = 10/281 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P G+V II+ +N+P + A+ GN + K + P +S + K+V E ++ +++
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 179 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
GA T+ D++ D + +TG++ V ++V + LLELGG + +
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 292
+ +L + + G GQ C + ++ + +P
Sbjct: 275 IVFEDADLNLVVPSAVFASVG-TAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDP 333
Query: 293 LESKDLSRIVNSNHFA--RLSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 349
+ L +++ L+ + + G +V GG+ D+ + PT++ + D+
Sbjct: 334 WDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAP 393
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
I+ E F P+L +L E++F N + L++ +FT +
Sbjct: 394 IVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKD 434
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 120/303 (39%), Gaps = 13/303 (4%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
+P G+ I+P+N+P + AIA GNA +LKPSE P+ LA+L E +
Sbjct: 161 QPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLPAG 220
Query: 177 SIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ VV G A+L + + G++ +AR V AA + G K+ +
Sbjct: 221 ILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXIIX 280
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNPL-- 293
+L A +I +G + G+ C + + + P
Sbjct: 281 PDADLDQAANALIGAGYG-SAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPYTD 339
Query: 294 ESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERD------KNKLRIAPTLLLDVPR 346
E D +V R+ L+D G K+V G RD +N I L DV
Sbjct: 340 EKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDG-RDFKLQGYENGHFIGGCLFDDVTP 398
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
D I EIFGP+L ++ E++ + ++T + + F ++ G +
Sbjct: 399 DXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIGXV 458
Query: 407 VIN 409
+N
Sbjct: 459 GVN 461
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 12/303 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 174
EP GV +I+PWN+P +S+ AI GN +V KPS + L +L E
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKH-----LTPVLLELGG 228
+ + G+V + I +TG+ RI+ AA H + ++ E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPXXXXXXXXXXXXF 287
K+ ++ D +L A ++ +G GQ C + +I Y
Sbjct: 785 KNAIIIDDDADLDEAVPHVLYSAFGF-QGQKCSACSRVIVLDAVYDKFIERLVSMAKATK 843
Query: 288 YGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAP-TLLLDVPR 346
G + + + + + + + + K G +++ + P T++ +
Sbjct: 844 VGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKP 903
Query: 347 DSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGL 406
+ I EEIFGP+L ++ + + + NS L +F+ + + + G L
Sbjct: 904 EHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNL 963
Query: 407 VIN 409
IN
Sbjct: 964 YIN 966
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 179
GV + ISPWN+P + L V A+ AGN++V KP+E P + L+ E + S++
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 180 VVEGAVAETSALLDQKWD--KICYTGNSRVARIV---MAAAAKHLTPVLLELGGKSPVVF 234
+V G A L D + +TG++ VAR + +AA + P++ E GG + ++
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 235 DS 236
D+
Sbjct: 770 DA 771
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 115/281 (40%), Gaps = 10/281 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P G+V II+ +N+P + A+ GN + K + S + K++ + ++ + +
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 179 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
GA T+ D++ + + +TG+++V + V + LLELGG + +
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGKNP 292
+ +L + + G GQ C + + + NP
Sbjct: 277 IAFEDADLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335
Query: 293 LESKDLSRIVNSNHFAR--LSKLLDDDKVSGKIVHGGE-RDKNKLRIAPTLLLDVPRDSL 349
+ L +++ L + + K G +V+GG+ D+ + PT++ + D+
Sbjct: 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395
Query: 350 IMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390
I E F P+L + E+ F N + L++ +FT +
Sbjct: 396 IAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKD 436
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 23/317 (7%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIA-AGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSI 178
G V ISP+N F + GA A GN ++ KPS+ A +S + +++ E + + I
Sbjct: 202 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNII 259
Query: 179 RVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLT-----PVLL-ELGGKS 230
+ V +G + + I +TG+ + + A++L P L E GGK+
Sbjct: 260 QFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKN 319
Query: 231 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 290
S ++ + + GQ C + + K P
Sbjct: 320 FHFVHSSADVDSVVSGTLRSAFE-YGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVG 378
Query: 291 NPLE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVP 345
+P E S ++++ FAR+ K L+ + S I+ GG+ +++ + P ++
Sbjct: 379 DPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKD 438
Query: 346 RDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV- 401
IM EEIFGP+L + DK ++ +++S T L +F +K + Q+ +
Sbjct: 439 PQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLR 498
Query: 402 -SAGGLVINDTAVHVIM 417
+AG IND + ++
Sbjct: 499 NAAGNFYINDKSTGSVV 515
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 135/317 (42%), Gaps = 23/317 (7%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIA-AGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSI 178
G V ISP+N F + GA A GN ++ KPS+ A +S + +++ E + + I
Sbjct: 205 GFVAAISPFN--FTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNII 262
Query: 179 RVV--EGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-----HLTPVLL-ELGGKS 230
+ V +G + + + I +TG+ + + A+ H P L E GGK+
Sbjct: 263 QFVPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKN 322
Query: 231 PVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXXFYGK 290
+++ + + GQ C + + P
Sbjct: 323 FHFVHRSADVESVVSGTLRSAFEYG-GQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVG 381
Query: 291 NPLE--SKDLSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVP 345
+P E S ++++ FAR+ K L+ + S I+ GG+ D + + P ++
Sbjct: 382 DPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKD 441
Query: 346 RDSLIMSEEIFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV- 401
IM EEIFGP+L + DK +++ +++S T L +F+ +K + Q+ + +
Sbjct: 442 PQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLR 501
Query: 402 -SAGGLVINDTAVHVIM 417
+AG IND + I+
Sbjct: 502 NAAGNFYINDKSTGSIV 518
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 298 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 354
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 355 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 409
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 410 DTAVHVIM 417
D + I+
Sbjct: 511 DKSTGSIV 518
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 298 LSRIVNSNHFARLSKLLDDDKVSGK--IVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEE 354
S ++++ FAR+ K L+ + S I+ GG+ D + + P ++ IM EE
Sbjct: 391 FSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEE 450
Query: 355 IFGPLLPILTV--DKIEDSFDIINSGTK-PLAAYLFTNNKKLKQQFVETV--SAGGLVIN 409
IFGP+L + DK +++ +++S T L +F+ +K + Q+ + + +AG IN
Sbjct: 451 IFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIN 510
Query: 410 DTAVHVIM 417
D + I+
Sbjct: 511 DKSTGSIV 518
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 37 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 95 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 151
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 152 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 208
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 209 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 259
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 260 QADS-LNSAILC 270
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 35 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 92
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 93 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 149
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 150 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 206
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 207 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 257
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 258 EADS-LNSAILC 268
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 37 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 95 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 151
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 152 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 208
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 209 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 259
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 260 EADS-LNSAILC 270
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 37 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 95 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 151
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 152 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 208
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 209 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 259
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 260 EADS-LNSAILC 270
>pdb|2H5G|A Chain A, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
pdb|2H5G|B Chain B, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
Length = 463
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 114 EIVPEPFGVVLII---SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
E V P GV+L+I P P + +L AIA+GN L+LK + A S+ +L L
Sbjct: 135 EQVTVPIGVLLVIFESRPDCLPQVAAL-----AIASGNGLLLKGGKEAAHSNRILHLLTQ 189
Query: 171 EYMDLSSIRVVEGAV-----AETSALLDQKWDKICYTGNSRVARIVMAAA 215
E + + ++ V E LD+ D I G+S++ R + AA
Sbjct: 190 EALSIHGVKEAVQLVNTREEVEDLCRLDKXIDLIIPRGSSQLVRDIQKAA 239
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 49 MKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITT 108
+K N R D+ A + LD ++ LKT ++ L+++ P +++
Sbjct: 68 LKAANAR--DVARAKDKGLDAAFVDRLTLSDKALKTMVEG-LRQVATLPDPIGEMSNLKY 124
Query: 109 FPSSAEI--VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166
PS ++ + P GV+ II + +++D + +GNA +L+ A S++ LA
Sbjct: 125 RPSGIQVGQMRVPLGVIGII--YESRPNVTIDAAALCLKSGNATILRGGSEALESNTALA 182
Query: 167 KLVGE 171
KL+GE
Sbjct: 183 KLIGE 187
>pdb|1V04|A Chain A, Serum Paraoxonase By Directed Evolution
pdb|3SRE|A Chain A, Serum Paraoxonase-1 By Directed Evolution At Ph 6.5
pdb|3SRG|A Chain A, Serum Paraoxonase-1 By Directed Evolution At Ph 6.5 In
Complex With 2- Hydroxyquinoline
Length = 355
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173
EI+P G+ I S YP ++S DP +G L++ +E PA S L +++G +
Sbjct: 56 EILPN--GLAFISSGLKYPGIMSFDP----DKSGKILLMDLNEKEPAVSEL--EIIGNTL 107
Query: 174 DLSSIR 179
D+SS
Sbjct: 108 DISSFN 113
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Query: 183 GAVAETSALL---DQKWDKICYTGN-SRVARIVMAAAAKHLTPVLLELGGKSPVV-FDSG 237
G + TS L D D+I Y G+ + ARI++ H GG + F+
Sbjct: 364 GGIGHTSGLYTNQDVNADRIRYFGDKXKTARILINIPTTH--------GGIGDLYNFNVA 415
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 273
+L + C G WG N+ + P H+I K A
Sbjct: 416 PSLTLGC-----GSWGGNSISENVGPKHLINKKTVA 446
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 24/165 (14%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
+ EP G++ I P P ++ + ++ N ++ P A S++ AKLV +D
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV---LDA 156
Query: 176 SSIRVVEGAVAETSALLDQ----------KWDKICY---TGNSRVARIVMAAAAKHLTPV 222
+ V GA + +DQ K D I TG + AA P
Sbjct: 157 A---VAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK----AAYSSGKPA 209
Query: 223 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
+ G PVV D ++K A ++ K +NG C S +I
Sbjct: 210 IGVGAGNVPVVIDETADIKRAVASVLXSKT-FDNGVVCASEQAVI 253
>pdb|3OYO|A Chain A, Crystal Structure Of Hemopexin Fold Protein Cp4 From Cow
Pea
pdb|3OYO|B Chain B, Crystal Structure Of Hemopexin Fold Protein Cp4 From Cow
Pea
Length = 225
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 346 RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF-------- 397
D +++ + P+L EDS D TK YLF NK ++ +
Sbjct: 92 NDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGNKYVRIAYDSKQLVGN 151
Query: 398 VETVSAGGLVINDTAVHVIMLALLKNH 424
+ + G V+N T + A +H
Sbjct: 152 IRNIGDGFPVLNGTEFESGIDACFASH 178
>pdb|1V75|B Chain B, Crystal Structure Of Hemoglobin D From The Aldabra Giant
Tortoise (Geochelone Gigantea) At 2.0 A Resolution
pdb|1WMU|B Chain B, Crystal Structure Of Hemoglobin D From The Aldabra Giant
Tortoise, Geochelone Gigantea, At 1.65 A Resolution
pdb|2Z6N|B Chain B, Crystal Structure Of Carbonmonoxy Hemoglobin D From The
Aldabra Giant Tortoise, Geochelone Gigantea
Length = 146
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 95 HWMTPEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALV 151
HW + EK TS+ + E+ E +LI+ PW F S G +++ NA++
Sbjct: 2 HWTSEEKQYITSLWAKVNVGEVGGEALARLLIVYPWTQRFFASF----GNLSSANAIL 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,019,689
Number of Sequences: 62578
Number of extensions: 475851
Number of successful extensions: 1626
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1367
Number of HSP's gapped (non-prelim): 109
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)