Query 013901
Match_columns 434
No_of_seqs 161 out of 1341
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 19:13:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2.5E-91 8.7E-96 705.1 44.0 422 4-430 31-465 (490)
2 3ros_A NAD-dependent aldehyde 100.0 1.3E-88 4.5E-93 685.7 46.9 420 4-430 13-440 (484)
3 4f3x_A Putative aldehyde dehyd 100.0 8.2E-89 2.8E-93 689.5 42.9 423 4-430 49-479 (498)
4 3ifg_A Succinate-semialdehyde 100.0 1.2E-88 4.2E-93 686.6 43.9 422 4-430 37-466 (484)
5 3rh9_A Succinate-semialdehyde 100.0 2E-88 6.7E-93 687.3 45.4 420 4-429 36-465 (506)
6 3ed6_A Betaine aldehyde dehydr 100.0 3.3E-88 1.1E-92 687.8 46.0 422 4-430 57-492 (520)
7 3iwj_A Putative aminoaldehyde 100.0 5E-88 1.7E-92 685.8 46.6 425 4-430 32-471 (503)
8 3lns_A Benzaldehyde dehydrogen 100.0 8.4E-88 2.9E-92 677.6 47.4 421 3-430 14-439 (457)
9 3i44_A Aldehyde dehydrogenase; 100.0 9.2E-88 3.1E-92 681.7 47.7 420 4-430 50-480 (497)
10 3ek1_A Aldehyde dehydrogenase; 100.0 2.6E-88 8.9E-93 686.1 42.7 421 4-430 57-484 (504)
11 2o2p_A Formyltetrahydrofolate 100.0 4.3E-88 1.5E-92 686.5 43.4 425 4-430 61-499 (517)
12 1a4s_A ALDH, betaine aldehyde 100.0 1.6E-87 5.5E-92 681.5 47.5 421 4-430 45-478 (503)
13 3sza_A Aldehyde dehydrogenase, 100.0 9.6E-88 3.3E-92 677.5 45.4 414 11-430 12-430 (469)
14 1wnd_A Putative betaine aldehy 100.0 1.1E-87 3.7E-92 680.8 45.3 423 4-430 47-477 (495)
15 3qan_A 1-pyrroline-5-carboxyla 100.0 2.7E-87 9.2E-92 683.8 46.1 421 5-430 62-498 (538)
16 1bxs_A Aldehyde dehydrogenase; 100.0 1.9E-87 6.4E-92 680.0 44.3 421 4-429 45-477 (501)
17 3u4j_A NAD-dependent aldehyde 100.0 1.9E-87 6.5E-92 683.4 44.3 421 5-430 49-480 (528)
18 3k2w_A Betaine-aldehyde dehydr 100.0 9.3E-88 3.2E-92 682.9 41.6 422 4-430 37-470 (497)
19 1o04_A Aldehyde dehydrogenase, 100.0 1.4E-87 4.7E-92 680.8 42.4 421 4-429 44-476 (500)
20 3b4w_A Aldehyde dehydrogenase; 100.0 1.2E-87 4E-92 681.2 41.5 422 4-430 33-464 (495)
21 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.5E-87 2.2E-91 679.6 47.0 421 4-428 61-495 (516)
22 3prl_A NADP-dependent glyceral 100.0 2E-87 6.9E-92 680.4 42.6 421 4-430 36-465 (505)
23 4e4g_A Methylmalonate-semialde 100.0 3.1E-87 1.1E-91 680.8 41.8 420 4-428 51-483 (521)
24 2imp_A Lactaldehyde dehydrogen 100.0 7.1E-87 2.4E-91 674.7 44.0 422 4-430 31-461 (479)
25 2d4e_A 5-carboxymethyl-2-hydro 100.0 8.1E-87 2.8E-91 678.2 44.3 421 4-430 51-487 (515)
26 3jz4_A Succinate-semialdehyde 100.0 1.1E-86 3.9E-91 673.5 44.9 422 4-430 34-463 (481)
27 3pqa_A Lactaldehyde dehydrogen 100.0 6.9E-87 2.4E-91 673.5 43.0 414 4-430 21-446 (486)
28 3r31_A BADH, betaine aldehyde 100.0 3.6E-87 1.2E-91 679.7 40.7 418 4-429 39-469 (517)
29 3etf_A Putative succinate-semi 100.0 1.8E-86 6E-91 669.9 44.9 421 4-430 16-443 (462)
30 2w8n_A Succinate-semialdehyde 100.0 9.2E-87 3.1E-91 674.0 42.7 421 4-429 35-467 (487)
31 2j6l_A Aldehyde dehydrogenase 100.0 4.6E-86 1.6E-90 671.0 46.4 422 4-430 46-481 (500)
32 2ve5_A BADH, betaine aldehyde 100.0 4.2E-86 1.4E-90 671.3 43.5 422 4-430 31-465 (490)
33 3ty7_A Putative aldehyde dehyd 100.0 8E-86 2.7E-90 667.3 41.8 418 4-430 32-459 (478)
34 4h7n_A Aldehyde dehydrogenase; 100.0 1.2E-85 4.1E-90 664.9 42.2 419 4-428 15-442 (474)
35 1euh_A NADP dependent non phos 100.0 8.7E-86 3E-90 666.0 40.9 418 4-430 27-456 (475)
36 1uxt_A Glyceraldehyde-3-phosph 100.0 9.1E-86 3.1E-90 668.3 40.9 420 4-430 41-474 (501)
37 4dng_A Uncharacterized aldehyd 100.0 2.3E-85 7.7E-90 665.2 43.7 421 4-430 31-460 (485)
38 3r64_A NAD dependent benzaldeh 100.0 2.3E-85 7.8E-90 667.1 43.8 420 4-430 37-467 (508)
39 3ju8_A Succinylglutamic semial 100.0 2.3E-84 8E-89 657.5 47.3 418 4-428 29-457 (490)
40 1t90_A MMSDH, probable methylm 100.0 4.7E-85 1.6E-89 661.9 40.7 420 4-429 30-461 (486)
41 4e3x_A Delta-1-pyrroline-5-car 100.0 4.4E-84 1.5E-88 661.2 41.4 421 5-430 88-533 (563)
42 4f9i_A Proline dehydrogenase/d 100.0 3.5E-82 1.2E-86 680.5 45.2 419 5-428 556-989 (1026)
43 2y53_A Aldehyde dehydrogenase 100.0 2.7E-81 9.2E-86 641.4 39.4 421 4-430 31-500 (534)
44 3haz_A Proline dehydrogenase; 100.0 1.4E-79 4.9E-84 658.8 46.4 411 11-428 544-966 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 2.1E-79 7.2E-84 626.6 38.9 416 4-430 49-498 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 5.6E-79 1.9E-83 621.0 39.3 412 4-429 16-462 (510)
47 1vlu_A Gamma-glutamyl phosphat 100.0 1.4E-73 4.7E-78 573.9 26.2 378 18-431 15-424 (468)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.8E-72 6.2E-77 567.1 33.3 381 8-415 3-406 (464)
49 3my7_A Alcohol dehydrogenase/a 100.0 3E-72 1E-76 563.8 31.8 380 11-418 1-407 (452)
50 2h5g_A Delta 1-pyrroline-5-car 100.0 5.2E-71 1.8E-75 554.4 24.6 376 4-427 16-410 (463)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1.4E-68 4.7E-73 535.6 30.5 353 16-414 25-399 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 4.5E-68 1.5E-72 529.3 27.1 365 15-427 12-397 (427)
53 4gic_A HDH, histidinol dehydro 96.6 0.54 1.9E-05 45.1 27.8 321 32-429 26-384 (423)
54 1kae_A HDH, histidinol dehydro 85.9 25 0.00087 33.7 31.3 313 39-429 30-377 (434)
55 3v42_A Folliculin; tumor suppr 53.1 13 0.00044 32.6 4.2 46 137-184 21-66 (226)
56 2fiu_A Conserved hypothetical 40.2 87 0.003 23.2 6.6 59 302-379 15-75 (99)
57 3fgh_A Transcription factor A, 34.9 62 0.0021 21.7 4.7 37 24-60 28-64 (67)
58 1s7i_A Hypothetical protein PA 33.5 88 0.003 24.3 5.9 70 307-381 32-108 (124)
59 1use_A VAsp, vasodilator-stimu 33.0 33 0.0011 21.5 2.5 28 41-68 13-40 (45)
60 2co9_A Thymus high mobility gr 27.5 1.4E+02 0.0049 22.0 6.0 38 25-62 48-85 (102)
61 2eqz_A High mobility group pro 26.8 90 0.0031 22.2 4.6 37 24-60 47-83 (86)
62 1v63_A Nucleolar transcription 25.7 1.1E+02 0.0039 22.6 5.1 41 24-64 36-76 (101)
63 2ioj_A Hypothetical protein AF 25.0 53 0.0018 25.9 3.3 46 176-221 53-100 (139)
64 1hry_A Human SRY; DNA, DNA-bin 22.9 1E+02 0.0035 21.1 4.2 31 26-56 36-66 (76)
65 1gt0_D Transcription factor SO 21.9 1.3E+02 0.0044 20.9 4.6 31 26-56 34-64 (80)
66 2ec4_A FAS-associated factor 1 20.8 45 0.0015 27.9 2.1 39 354-392 26-68 (178)
67 2crj_A SWI/SNF-related matrix- 20.3 1E+02 0.0035 22.2 3.8 35 26-60 39-73 (92)
68 3l2b_A Probable manganase-depe 20.0 2.3E+02 0.0078 24.2 6.9 44 173-217 118-162 (245)
69 1vmd_A MGS, methylglyoxal synt 20.0 3.8E+02 0.013 22.2 7.5 120 113-257 19-151 (178)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.5e-91 Score=705.08 Aligned_cols=422 Identities=24% Similarity=0.315 Sum_probs=390.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..++
T Consensus 31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~ 110 (490)
T 2wme_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999766799999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+....... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~ 186 (490)
T 2wme_A 111 DVLEYYAGLVPAIEGEQIPL----RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEEEEE----ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHhccccccCccccc----cCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence 99999998887654432111 13456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHH-HHhcccCceEEecCCCCceEEcCCCC
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~-~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
.+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+ .+.+++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd 266 (490)
T 2wme_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence 999999999 999999999994 67889999997 999999999999988876 55667899999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~ 345 (490)
T 2wme_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred -hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 319 -VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 319 -~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+|+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 346 ~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~ 425 (490)
T 2wme_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred hcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHH
Confidence 688999999863 25899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||++..+. ..| +..|.||+||+.
T Consensus 426 ~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~ 465 (490)
T 2wme_A 426 RAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGREN 465 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchh
Confidence 99999999999999999865433 222 567999999983
No 2
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.3e-88 Score=685.70 Aligned_cols=420 Identities=19% Similarity=0.284 Sum_probs=393.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 91 (484)
T 3ros_A 13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV 91 (484)
T ss_dssp TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.++..... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 167 (484)
T 3ros_A 92 SICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167 (484)
T ss_dssp HHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999999998876543221 3467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.|++++.++ +|+|++|+++|+.+ .+. |+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl 246 (484)
T 3ros_A 168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP 246 (484)
T ss_dssp HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence 999999999 99999999999654 466 99987 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 67899999975 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 406 ~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 440 (484)
T 3ros_A 406 SAQIETGMTVINGRWITSGELPFGGIKKSGYGREL 440 (484)
T ss_dssp HHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBS
T ss_pred HHhCccceEEECCCCCCCCCCCcCCcCcccCCcCc
Confidence 999999999999954332 122 567889999873
No 3
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=8.2e-89 Score=689.50 Aligned_cols=423 Identities=19% Similarity=0.283 Sum_probs=393.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..++
T Consensus 49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~ 128 (498)
T 4f3x_A 49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128 (498)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999447999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+..... +. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 129 ~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~ 205 (498)
T 4f3x_A 129 DCWRFFAGAVRNLHAPAA-GE--YLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205 (498)
T ss_dssp HHHHHHHHHTTCCEEECB-EE--EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cC--CcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence 999999998887544321 11 113456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~ 285 (498)
T 4f3x_A 206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE 285 (498)
T ss_dssp HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence 99999999999999999999 557889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. +
T Consensus 286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 364 (498)
T 4f3x_A 286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364 (498)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999995 6
Q ss_pred CC-eeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 SG-KIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~~-~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
|+ ++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++
T Consensus 365 Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 444 (498)
T 4f3x_A 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRA 444 (498)
T ss_dssp TTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 77 99999976 34799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..|.||+||+.
T Consensus 445 a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 479 (498)
T 4f3x_A 445 ASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDM 479 (498)
T ss_dssp HHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBS
T ss_pred HHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccc
Confidence 999999999999977654 122 567889999873
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.2e-88 Score=686.56 Aligned_cols=422 Identities=24% Similarity=0.331 Sum_probs=390.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 115 (484)
T 3ifg_A 37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAA 115 (484)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+... .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~l~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 192 (484)
T 3ifg_A 116 SFIEWFAEEGKRVAGDTL-PT--PDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192 (484)
T ss_dssp HHHHHHHHHHTTCCEEEE-CC--SSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhhcCccc-cc--cCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999999888776433221 11 112456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence 999999999 999999999984 57889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 351 (484)
T 3ifg_A 273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALA 351 (484)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999985
Q ss_pred hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++
T Consensus 352 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 431 (484)
T 3ifg_A 352 KGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRV 431 (484)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHH
T ss_pred CCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 678999999864 3699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+..... ..| +..|.||+||+.
T Consensus 432 ~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~ 466 (484)
T 3ifg_A 432 AEALEYGMVGINTGLISNEVAPFGGVKQSGLGREG 466 (484)
T ss_dssp HHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBS
T ss_pred HHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCc
Confidence 999999999999854321 222 667999999983
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2e-88 Score=687.30 Aligned_cols=420 Identities=21% Similarity=0.306 Sum_probs=393.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 114 (506)
T 3rh9_A 36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA 114 (506)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEee-ecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.++++++.++++.+... +.. .+...++++ +|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 115 ~~l~~~a~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 190 (506)
T 3rh9_A 115 GFFDYCAKHISALDSHTI-PEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM 190 (506)
T ss_dssp HHHHHHHHHGGGGCCEEC-SCC---GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCccc-ccC---CCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence 999999999988765432 111 245678888 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD 270 (506)
T 3rh9_A 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD 270 (506)
T ss_dssp HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence 9999999999 999999999994 57889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++++++.++|+++.
T Consensus 271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 349 (506)
T 3rh9_A 271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDAL 349 (506)
T ss_dssp HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5889999999999999999999995
Q ss_pred -hCCeeeecCcc-CC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 319 -VSGKIVHGGER-DK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 319 -~~~~v~~gg~~-~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+|+++++||.. +. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++
T Consensus 350 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 429 (506)
T 3rh9_A 350 DKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQ 429 (506)
T ss_dssp HTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHH
T ss_pred HCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 67899999975 33 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCc
Q 013901 396 QFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRS 429 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~ 429 (434)
++++++++|+|+||+++.+.. .| +..+.||+||+
T Consensus 430 ~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~ 465 (506)
T 3rh9_A 430 RVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGRE 465 (506)
T ss_dssp HHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCB
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcC
Confidence 999999999999999765432 22 56788999987
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.3e-88 Score=687.85 Aligned_cols=422 Identities=22% Similarity=0.327 Sum_probs=393.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~--~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..|+++++++|++|| +.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~ 135 (520)
T 3ed6_A 57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESY-ADMDD 135 (520)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHH
Confidence 678899999999999999999999999 899999999999999999999999999999999999999999997 59999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.+++++...+.+.+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 136 ~~~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t 212 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGEMI-DSP--IPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212 (520)
T ss_dssp HHHHHHHHHHHTTSCCEEEE-CCS--STTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCeec-ccC--CCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence 99999999998877654321 111 124567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++||
T Consensus 213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA 292 (520)
T 3ed6_A 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292 (520)
T ss_dssp HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence 99999999999 99999999999 567899999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a 371 (520)
T 3ed6_A 293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVA 371 (520)
T ss_dssp CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999999
Q ss_pred h-hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013901 318 K-VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 318 ~-~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 372 ~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 451 (520)
T 3ed6_A 372 KAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDI 451 (520)
T ss_dssp HHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCH
T ss_pred HhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 5 677999999763 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++++++|+|+||+.+.+. ..| +..|.||+||+.
T Consensus 452 ~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~ 492 (520)
T 3ed6_A 452 GKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGREL 492 (520)
T ss_dssp HHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccc
Confidence 999999999999999999976553 222 567899999884
No 7
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=5e-88 Score=685.84 Aligned_cols=425 Identities=26% Similarity=0.395 Sum_probs=393.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh-----hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~-----~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e 78 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~e 110 (503)
T 3iwj_A 32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WD 110 (503)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence 5788999999999999999999999999 99999999999999999999999999999999999999999996 69
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCC
Q 013901 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (434)
Q Consensus 79 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~ 158 (434)
+..+++.+++++...+.+.+...........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 190 (503)
T 3iwj_A 111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence 99999999999999888765442221111124567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 159 ~~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
|.++..+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||+
T Consensus 191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~ 270 (503)
T 3iwj_A 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270 (503)
T ss_dssp CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence 99999999999999 999999999995 57888999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++
T Consensus 271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 349 (503)
T 3iwj_A 271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFV 349 (503)
T ss_dssp SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 488999999999999999999
Q ss_pred HHhh-hCCeeeecCccC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCC
Q 013901 315 DDDK-VSGKIVHGGERD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNN 390 (434)
Q Consensus 315 ~~a~-~~~~v~~gg~~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d 390 (434)
+++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|
T Consensus 350 ~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 429 (503)
T 3iwj_A 350 SNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISND 429 (503)
T ss_dssp HHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSC
T ss_pred HHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 9995 678999999764 469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 391 KKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 391 ~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
.++++++++++++|+|+||++.... ..| +..+.||+||++
T Consensus 430 ~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 471 (503)
T 3iwj_A 430 LERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGREL 471 (503)
T ss_dssp HHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBS
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcc
Confidence 9999999999999999999864322 122 567899999874
No 8
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=8.4e-88 Score=677.58 Aligned_cols=421 Identities=30% Similarity=0.536 Sum_probs=385.3
Q ss_pred cccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 3 ~~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
.+++.+++++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+
T Consensus 14 ~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~ 93 (457)
T 3lns_A 14 HIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93 (457)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHH
T ss_pred CCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999976799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++.++++.++..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 94 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 173 (457)
T 3lns_A 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETS 173 (457)
T ss_dssp HHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 99999999999988765433322222356788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 163 SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 163 ~~l~~~~~~alp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
..+++++.+++|+|++|+++|+.+.+..|+++++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.
T Consensus 174 ~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~ 253 (457)
T 3lns_A 174 AVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQ 253 (457)
T ss_dssp HHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHH
Confidence 99999999999999999999988888999986699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCe
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGK 322 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~ 322 (434)
|++.+++++| .|+||.|+++++||||++++++|+++|++++++++ |.++ ++||++++++++++.++++++. ++
T Consensus 254 Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~~a~--~~ 326 (457)
T 3lns_A 254 TVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLEATQ--GQ 326 (457)
T ss_dssp HHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHHHCC--SE
T ss_pred HHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHHhcC--Ce
Confidence 9999999999 99999999999999999999999999999999987 6555 9999999999999999999763 69
Q ss_pred eeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhc-CCCCcEEEEecCCHHHHHHHHhhc
Q 013901 323 IVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINS-GTKPLAAYLFTNNKKLKQQFVETV 401 (434)
Q Consensus 323 v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~~~i~t~d~~~~~~~~~~~ 401 (434)
+++||..+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+ +++||+++|||+|.++++++++++
T Consensus 327 ~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l 406 (457)
T 3lns_A 327 VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI 406 (457)
T ss_dssp EEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS
T ss_pred EEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC
Confidence 9999987667999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ceeeEEECCCchhhhhh----hhhhhcCCCCcc
Q 013901 402 SAGGLVINDTAVHVIML----ALLKNHTLLRSC 430 (434)
Q Consensus 402 ~~g~v~iN~~~~~~~~~----~~~~~~~~~~~~ 430 (434)
++|+|+||+++++...+ +..|.||+||+.
T Consensus 407 ~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~ 439 (457)
T 3lns_A 407 QSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYH 439 (457)
T ss_dssp CCSEEEESCCSGGGGCTTSCBCCCGGGEECCBS
T ss_pred CcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCc
Confidence 99999999987665433 556889999873
No 9
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=9.2e-88 Score=681.66 Aligned_cols=420 Identities=22% Similarity=0.337 Sum_probs=388.9
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 129 (497)
T 3i44_A 50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129 (497)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999756999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEe-eecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
+.++++++.+..+..+... ..+...+++ ++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (497)
T 3i44_A 130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204 (497)
T ss_dssp HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence 9999999888765432211 013456778 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD 284 (497)
T 3i44_A 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD 284 (497)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence 9999999999 99999999999 557889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (497)
T 3i44_A 285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362 (497)
T ss_dssp -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999985
Q ss_pred -hCCeeeecCc-cCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 -VSGKIVHGGE-RDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 -~~~~v~~gg~-~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||. ... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 363 ~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 442 (497)
T 3i44_A 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSK 442 (497)
T ss_dssp HTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 6789999994 332 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
++++++++++|+|+||........| +..|.||+||+.
T Consensus 443 a~~~a~~l~aG~V~iN~~~~~~~~PfGG~k~SG~Gr~~ 480 (497)
T 3i44_A 443 CRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREG 480 (497)
T ss_dssp HHHHHHHSCCSEEEETTCCCCTTCCBCCSGGGCCCCBS
T ss_pred HHHHHHhCCcCeEEECCCCCCCCCCcCCcCcCcCCccc
Confidence 9999999999999999633222223 567999999873
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.6e-88 Score=686.09 Aligned_cols=421 Identities=21% Similarity=0.338 Sum_probs=390.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 135 (504)
T 3ek1_A 57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAA 135 (504)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+..... .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 136 ~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~ 212 (504)
T 3ek1_A 136 SFIEWFAEEAKRVYGDTI-PA--PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212 (504)
T ss_dssp HHHHHHHHHHTTCCEEEE-CC--SSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cc--ccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 999999888766433221 11 112356788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence 999999999 999999999984 57889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 371 (504)
T 3ek1_A 293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVS 371 (504)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999995
Q ss_pred hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 319 VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 319 ~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
+|+++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 372 ~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 372 KGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp TTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred CCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 67899999976 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||+..... ..| +..|.||+||+.
T Consensus 451 ~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 484 (504)
T 3ek1_A 451 EALEYGMVGHNTGLISNEVAPFGGVKQSGLGREG 484 (504)
T ss_dssp HHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCC
Confidence 99999999999865322 223 667999999973
No 11
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.3e-88 Score=686.48 Aligned_cols=425 Identities=20% Similarity=0.274 Sum_probs=391.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+.+|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 140 (517)
T 2o2p_A 61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM 140 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6788999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
+++.+++++++++.+.+.. .+... .......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 141 ~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ 219 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHH
Confidence 9999999999888765532 11110 011225689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~ 236 (434)
++..+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++
T Consensus 220 ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~ 299 (517)
T 2o2p_A 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECC
Confidence 999999999999 999999999994 56789999997 999999999999999999999 89999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 300 dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~ 378 (517)
T 2o2p_A 300 DCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQ 378 (517)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999995 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHHhcCCCCcEEEEecCCH
Q 013901 316 DDK-VSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNK 391 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i~t~d~ 391 (434)
++. +|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++|+++|||+++|||+|.
T Consensus 379 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 458 (517)
T 2o2p_A 379 RGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDI 458 (517)
T ss_dssp HHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBH
T ss_pred HHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCH
Confidence 985 6789999998643 689999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 392 KLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 392 ~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++++++|+|+||++.... ..| +..|.||+||+.
T Consensus 459 ~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~ 499 (517)
T 2o2p_A 459 NKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499 (517)
T ss_dssp HHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBS
T ss_pred HHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccC
Confidence 999999999999999999865321 223 567899999873
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.6e-87 Score=681.48 Aligned_cols=421 Identities=23% Similarity=0.334 Sum_probs=391.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 123 (503)
T 1a4s_A 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++++.+.. .... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 124 ~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 199 (503)
T 1a4s_A 124 QCIEYYAGLAPTLSGQH-IQLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCEEE-EECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCCc-ccCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999988775422 1111 2346788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence 999999999 99999999998447788999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++. +
T Consensus 280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999996 4889999999999999999999985 6
Q ss_pred CCeeeecCccC-------CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 320 SGKIVHGGERD-------KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 320 ~~~v~~gg~~~-------~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 78999999764 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 439 ~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~ 478 (503)
T 1a4s_A 439 RAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGREN 478 (503)
T ss_dssp HHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBS
T ss_pred HHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccc
Confidence 99999999999999999866432 223 567899999873
No 13
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=9.6e-88 Score=677.53 Aligned_cols=414 Identities=41% Similarity=0.689 Sum_probs=380.6
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 013901 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (434)
Q Consensus 11 ~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~ 90 (434)
.+.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++..+++++
T Consensus 12 ~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 12 PRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44567779999999999999999999999999999999999999999999999999999999997679999999999999
Q ss_pred HHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH
Q 013901 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~ 170 (434)
+.++.|..+..........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 99988876543332222234568899999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHH
Q 013901 171 EYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250 (434)
Q Consensus 171 ~alp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~ 250 (434)
+++|+|++|+++|+.+.+..|+.|++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.|++.++++
T Consensus 172 ~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 172 QYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp HHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred HhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 99999999999998777788888889999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC-CCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCcc
Q 013901 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGER 329 (434)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~ 329 (434)
+| .|+||.|+++++||||++++++|+++|++++++++ |+| ++++++||++++.+++++.+++ +|+++++||..
T Consensus 252 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTG 325 (469)
T ss_dssp HH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCE
T ss_pred HH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCcc
Confidence 99 99999999999999999999999999999999985 665 5689999999999999999998 58899999987
Q ss_pred CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEC
Q 013901 330 DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVIN 409 (434)
Q Consensus 330 ~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN 409 (434)
+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++++++++|+|+||
T Consensus 326 ~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN 405 (469)
T 3sza_A 326 DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAAN 405 (469)
T ss_dssp ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEe
Confidence 76899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhh----hhhhhcCCCCcc
Q 013901 410 DTAVHVIML----ALLKNHTLLRSC 430 (434)
Q Consensus 410 ~~~~~~~~~----~~~~~~~~~~~~ 430 (434)
+...|...+ +..|.||+||+.
T Consensus 406 ~~~~~~~~~~~PfGG~k~SG~Gr~~ 430 (469)
T 3sza_A 406 DVIVHITLHSLPFGGVGNSGMGSYH 430 (469)
T ss_dssp CSSGGGSCTTSCBCCCGGGEECCBS
T ss_pred CCCCCCCCCCCCcCCccccccCccc
Confidence 987665433 567999999983
No 14
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.1e-87 Score=680.79 Aligned_cols=423 Identities=22% Similarity=0.313 Sum_probs=390.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~ 126 (495)
T 1wnd_A 47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 126 (495)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999733999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 127 ~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 203 (495)
T 1wnd_A 127 DVFRFFAGAARCLNGLAA-GEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 203 (495)
T ss_dssp HHHHHHHHHTTCCEEECB-EEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHH
Confidence 999999998887654321 111 12335688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~alp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.+++|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 204 ~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~ 283 (495)
T 1wnd_A 204 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 283 (495)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHH
Confidence 99999999999999999999 567889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. +
T Consensus 284 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 362 (495)
T 1wnd_A 284 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKAT 362 (495)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999996 4889999999999999999999985 5
Q ss_pred C-CeeeecCc-cCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 320 S-GKIVHGGE-RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 320 ~-~~v~~gg~-~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
| +++++||. .+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 363 G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 442 (495)
T 1wnd_A 363 GHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRV 442 (495)
T ss_dssp SSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHH
T ss_pred CCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHH
Confidence 6 79999997 544699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 443 ~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~ 477 (495)
T 1wnd_A 443 SARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDM 477 (495)
T ss_dssp HHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBS
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccc
Confidence 999999999999865321 222 557888998873
No 15
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.7e-87 Score=683.75 Aligned_cols=421 Identities=21% Similarity=0.336 Sum_probs=390.1
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++..+..|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999997 59999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.++++++.+..+......... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 999999985555444332211 24567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc------cCceEEecCCCCceEEc
Q 013901 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD 235 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~------~~p~~~e~gG~~~~iv~ 235 (434)
+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.++++ +||+++|+|||||+||+
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~ 297 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD 297 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence 99999998 99999999999 567889999997 99999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|
T Consensus 298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i 376 (538)
T 3qan_A 298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYI 376 (538)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 588999999999999999999
Q ss_pred HHhhhCCeeeecCccCC-CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGERDK-NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~~~-~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+++...+++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 377 ~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 456 (538)
T 3qan_A 377 EIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAH 456 (538)
T ss_dssp HHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHH
T ss_pred HHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHH
Confidence 99964339999998754 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh---hhh-hhhhhcCCC-Ccc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV---IML-ALLKNHTLL-RSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~---~~~-~~~~~~~~~-~~~ 430 (434)
++++++++++|+|+||+..++. ..| +..+.||+| |+.
T Consensus 457 a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 457 IEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp HHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred HHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 9999999999999999533332 222 667899999 873
No 16
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.9e-87 Score=680.02 Aligned_cols=421 Identities=23% Similarity=0.301 Sum_probs=391.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~ 80 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~ 124 (501)
T 1bxs_A 45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 124 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 6788999999999999999999999999 8999999999999999999999999999999999999999987667999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
.+++.++++++.++++.++.. .. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 125 ~~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 200 (501)
T 1bxs_A 125 GCIKTLRYCAGWADKIQGRTI-PM---DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200 (501)
T ss_dssp HHHHHHHHHHHHGGGCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHhhCCee-ec---cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence 999999999999988765421 11 12345688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~ 236 (434)
++..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||++
T Consensus 201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~ 280 (501)
T 1bxs_A 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280 (501)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence 999999999999 99999999999 567889999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 359 (501)
T 1bxs_A 281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIE 359 (501)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 360 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 439 (501)
T 1bxs_A 360 SGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 439 (501)
T ss_dssp HHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHH
Confidence 985 678999999763 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||++.... ..| +..+.||+||+
T Consensus 440 a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~ 477 (501)
T 1bxs_A 440 AITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRE 477 (501)
T ss_dssp HHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCcc
Confidence 9999999999999999865321 222 45788888887
No 17
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-87 Score=683.38 Aligned_cols=421 Identities=25% Similarity=0.336 Sum_probs=392.2
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhh--hhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~--~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
++.+++++..+..++++++++|++|| ..|+.++.++|.++|+++++.|++++++|++++++|+|||..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 78899999999999999999999999 78999999999999999999999999999999999999999999 4799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~ 162 (434)
++.++++++.++++.+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEGQTH-NNI--GDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCEEEE-CCS--CTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCeee-ccC--CCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 9999999999887754221 111 1245678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD 284 (528)
T 3u4j_A 205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD 284 (528)
T ss_dssp HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence 9999999999 99999999999 667899999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~ 363 (528)
T 3u4j_A 285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI 363 (528)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 4789999999999999999999985
Q ss_pred -hCCeeeecCccCC--CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 319 -VSGKIVHGGERDK--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 319 -~~~~v~~gg~~~~--~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++
T Consensus 364 ~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 443 (528)
T 3u4j_A 364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETAL 443 (528)
T ss_dssp HTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHH
T ss_pred HCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Confidence 6789999998644 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+++... ..| +..+.||+||+.
T Consensus 444 ~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 480 (528)
T 3u4j_A 444 QTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGREL 480 (528)
T ss_dssp HHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCc
Confidence 99999999999999975432 122 567889999873
No 18
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=9.3e-88 Score=682.92 Aligned_cols=422 Identities=20% Similarity=0.298 Sum_probs=392.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 115 (497)
T 3k2w_A 37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA 115 (497)
T ss_dssp SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++..++++.+.... . ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~~~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (497)
T 3k2w_A 116 TFIDYGCDNALTIEGDILP-S--DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192 (497)
T ss_dssp HHHHHHHHTTTTCCEEEEE-C--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCcccc-c--CCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999999988877654321 1 123456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|+||+++| +.+.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||+
T Consensus 193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence 999999999 99999999999 557889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 351 (497)
T 3k2w_A 273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIK 351 (497)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5789999999999999999999995
Q ss_pred hCCeeeecCcc--C-C--CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGER--D-K--NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~--~-~--~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||.. . . .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++
T Consensus 352 ~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 431 (497)
T 3k2w_A 352 QGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFAN 431 (497)
T ss_dssp HHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHH
T ss_pred CCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHH
Confidence 68899999973 2 2 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhh-hh-hhhhhcCCCCcc
Q 013901 394 KQQFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLLRSC 430 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~~~~ 430 (434)
++++++++++|+|+||+++.+.. .| +..|.||+||+.
T Consensus 432 a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~ 470 (497)
T 3k2w_A 432 INQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGED 470 (497)
T ss_dssp HHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBS
T ss_pred HHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccc
Confidence 99999999999999999876642 12 456899999873
No 19
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.4e-87 Score=680.85 Aligned_cols=421 Identities=24% Similarity=0.311 Sum_probs=391.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~---~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~ 80 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+.
T Consensus 44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~ 123 (500)
T 1o04_A 44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD 123 (500)
T ss_dssp TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 6788999999999999999999999999 8999999999999999999999999999999999999999988667999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
.+++.++++++.++++.++.. +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 124 ~~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 199 (500)
T 1o04_A 124 MVLKCLRYYAGWADKYHGKTI-PI---DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199 (500)
T ss_dssp HHHHHHHHHHHHTTTCCEEEE-CC---SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHhhCcce-ec---CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 999999999999888765421 11 12345688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh-cccCceEEecCCCCceEEcC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~-~~~~p~~~e~gG~~~~iv~~ 236 (434)
++..|++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|++.++ +++||+++|+|||||+||++
T Consensus 200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~ 279 (500)
T 1o04_A 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 279 (500)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence 999999999999 99999999999 567889999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~ 358 (500)
T 1o04_A 280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYIN 358 (500)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. +|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 359 ~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 438 (500)
T 1o04_A 359 TGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438 (500)
T ss_dssp HHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred HHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 985 678999999764 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||++.... ..| +..+.||+||+
T Consensus 439 a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~ 476 (500)
T 1o04_A 439 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRE 476 (500)
T ss_dssp HHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCcc
Confidence 9999999999999999865321 222 45788888887
No 20
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-87 Score=681.21 Aligned_cols=422 Identities=25% Similarity=0.333 Sum_probs=390.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~ 81 (434)
+++.+++++..+..++++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..
T Consensus 33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 112 (495)
T 3b4w_A 33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG 112 (495)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 6788999999999999999999999999 99999999999999999999999999999999999999999986469999
Q ss_pred HHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+++.++++++.++++.+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 113 ~~~~~~~~a~~~~~~~g~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 188 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTE-TRT---GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEE-EEE---ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCc-ccC---CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence 9999999998888776532 111 123356899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
+..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD 268 (495)
T 3b4w_A 189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD 268 (495)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence 99999999999 99999999999767899999986 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~ 347 (495)
T 3b4w_A 269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGI 347 (495)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999995 5889999999999999999999985
Q ss_pred -hCCeeeecCccCC---CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 -VSGKIVHGGERDK---NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 -~~~~v~~gg~~~~---~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|+++++||.... .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 348 ~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 427 (495)
T 3b4w_A 348 EEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427 (495)
T ss_dssp HTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHH
T ss_pred hCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 5779999997643 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||++......| +..+.||+||+.
T Consensus 428 ~~~~~~l~aG~V~iN~~~~~~~~PfGG~k~SG~Gr~~ 464 (495)
T 3b4w_A 428 IKISQQIRTGTYGINWYAFDPGSPFGGYKNSGIGREN 464 (495)
T ss_dssp HHHHHHSCCSCCEESSCCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCcCccc
Confidence 999999999999999865111222 457888888873
No 21
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.5e-87 Score=679.64 Aligned_cols=421 Identities=20% Similarity=0.307 Sum_probs=391.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 139 (516)
T 1uzb_A 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 378899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.++..... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 140 DFIEYYARAALRYRYPAVEVV--PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCCC--CCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccc--CCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 999999999988876432101 112345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh------cccCceEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~------~~~~p~~~e~gG~~~~iv 234 (434)
.+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999 99999999999 567889999997 999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i 314 (434)
++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|++++++||++++.+++++.++|
T Consensus 298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i 376 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYI 376 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999995589999999999999999999
Q ss_pred HHhhhCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+++...+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 377 ~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 456 (516)
T 1uzb_A 377 EIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREH 456 (516)
T ss_dssp HHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHH
T ss_pred HHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHH
Confidence 999655599999976 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhh---h-hhhhhcCCCC
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIM---L-ALLKNHTLLR 428 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~---~-~~~~~~~~~~ 428 (434)
++++++++++|+|+||+++++... | +..+.||+|+
T Consensus 457 a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 495 (516)
T 1uzb_A 457 LEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495 (516)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC
T ss_pred HHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC
Confidence 999999999999999987655332 2 5568999994
No 22
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2e-87 Score=680.43 Aligned_cols=421 Identities=23% Similarity=0.341 Sum_probs=390.1
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 114 (505)
T 3prl_A 36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTA 114 (505)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccccccc--CCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITT--FPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~ 161 (434)
+.++++++.++++.+.......... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 115 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t 194 (505)
T 3prl_A 115 DIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194 (505)
T ss_dssp HHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999999887653221110000 02356889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 162 SSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 162 ~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
+..|++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||++||
T Consensus 195 a~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 272 (505)
T 3prl_A 195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDA 272 (505)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTC
T ss_pred HHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCC
Confidence 99999999998 999999999994 67889999997 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++.+++++.++++++.
T Consensus 273 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~ 351 (505)
T 3prl_A 273 DLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDAL 351 (505)
T ss_dssp CHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999999999999999999999999997789999999999999999999995
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 352 ~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 429 (505)
T 3prl_A 352 ENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI 429 (505)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHH
T ss_pred HCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 67899999974 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..|.||+||++
T Consensus 430 ~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~ 465 (505)
T 3prl_A 430 GKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQG 465 (505)
T ss_dssp HHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBS
T ss_pred HHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCc
Confidence 999999999999977532 223 667999999984
No 23
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-87 Score=680.77 Aligned_cols=420 Identities=19% Similarity=0.238 Sum_probs=388.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 129 (521)
T 4e4g_A 51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL 129 (521)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+...... ... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~~~~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~ 206 (521)
T 4e4g_A 130 EVCEFVIGIPHLQKSEF-TEG--AGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206 (521)
T ss_dssp HHHHHHHTHHHHTCEEE-EEE--EETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999987665433221 111 112345788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~ 286 (521)
T 4e4g_A 207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD 286 (521)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence 999999999 99999999999888889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
.|++.+++++| .|+||.|+++++||||++ ++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.
T Consensus 287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (521)
T 4e4g_A 287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIE 365 (521)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999999999999 9999999999999999999995 5889999999999999999999995
Q ss_pred hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 319 VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 319 ~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
+|+++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 366 ~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 445 (521)
T 4e4g_A 366 QGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDA 445 (521)
T ss_dssp HTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHH
T ss_pred CCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHH
Confidence 688999999642 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCC
Q 013901 394 KQQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLR 428 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~ 428 (434)
++++++++++|+|+||+++.+. ..| +..|.||+|+
T Consensus 446 a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~ 483 (521)
T 4e4g_A 446 ARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGD 483 (521)
T ss_dssp HHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESS
T ss_pred HHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCC
Confidence 9999999999999999875432 123 6678999993
No 24
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.1e-87 Score=674.66 Aligned_cols=422 Identities=23% Similarity=0.342 Sum_probs=391.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (479)
T 2imp_A 31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA 109 (479)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.++.. +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 110 ~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 186 (479)
T 2imp_A 110 DYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186 (479)
T ss_dssp HHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 999999988777655431 111 12345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence 999999999 999999999995 46788999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC--CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL--ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~--~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 4889999999999999999999985
Q ss_pred -hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 319 -VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 319 -~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
+|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 57899999976 3368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 397 FVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++|+|+||+++.+. ..| +..|.||+||+.
T Consensus 426 ~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 461 (479)
T 2imp_A 426 AIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGAD 461 (479)
T ss_dssp HHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBS
T ss_pred HHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCc
Confidence 9999999999999977652 222 556888998874
No 25
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=8.1e-87 Score=678.20 Aligned_cols=421 Identities=22% Similarity=0.299 Sum_probs=390.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 129 (515)
T 2d4e_A 51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA 129 (515)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++++.+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 206 (515)
T 2d4e_A 130 ENFAFYAEYAEHAMEDR-TFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206 (515)
T ss_dssp HHHHHHHTTGGGTTCEE-ECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-cccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence 99999998887765432 1111 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence 999999999 999999999994 57889999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLE-SKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~-~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++.
T Consensus 287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 365 (515)
T 2d4e_A 287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKR 365 (515)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999965 789999999999999999999985
Q ss_pred hCCeeeecCccCC---------CCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecC
Q 013901 319 VSGKIVHGGERDK---------NKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTN 389 (434)
Q Consensus 319 ~~~~v~~gg~~~~---------~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~ 389 (434)
+|+++++||.... .|+|++|||+.+ +++|++++||+||||++|++|+|++|||+++|++++||+++|||+
T Consensus 366 ~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 444 (515)
T 2d4e_A 366 EGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTR 444 (515)
T ss_dssp TTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred CCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECC
Confidence 6789999997643 589999999999 999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 390 NKKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 390 d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
|.++++++++++++|+|+||++.... ..| +..+.||+||+.
T Consensus 445 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~ 487 (515)
T 2d4e_A 445 DLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREG 487 (515)
T ss_dssp BHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBS
T ss_pred CHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccc
Confidence 99999999999999999999865421 223 667999999873
No 26
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.1e-86 Score=673.52 Aligned_cols=422 Identities=22% Similarity=0.344 Sum_probs=390.6
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 112 (481)
T 3jz4_A 34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAA 112 (481)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 577899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++....+...... +. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 113 ~~~~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 189 (481)
T 3jz4_A 113 SFIEWFAEEGKRIYGDTI-PG--HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189 (481)
T ss_dssp HHHHHHHHHGGGCCEEEE-CC--SSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cc--cCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 999998887765433211 11 112456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||+
T Consensus 190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence 999999998 99999999999 567889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 348 (481)
T 3jz4_A 270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALE 348 (481)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999995 5889999999999999999999985
Q ss_pred hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 ~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++++
T Consensus 349 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~ 428 (481)
T 3jz4_A 349 KGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRV 428 (481)
T ss_dssp TTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHH
T ss_pred CCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHH
Confidence 67899999976 44689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 429 ~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (481)
T 3jz4_A 429 GEALEYGIVGINTGIISNEVAPFGGIKASGLGREG 463 (481)
T ss_dssp HHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBS
T ss_pred HHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCc
Confidence 999999999999866432 222 667899999873
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=6.9e-87 Score=673.50 Aligned_cols=414 Identities=28% Similarity=0.401 Sum_probs=387.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 99 (486)
T 3pqa_A 21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSI 99 (486)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.+... +. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~a~~~~~~~~~~~-~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 174 (486)
T 3pqa_A 100 GTFKLAAFYVKEHRDEVI-PS----DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174 (486)
T ss_dssp HHHHHHHHHHHHCCEEEE-CC----TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcee-cC----CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence 999999999988755331 11 2456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-----cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 164 LLAKLVGEY-----MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 164 ~l~~~~~~a-----lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
.+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||++
T Consensus 175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~ 252 (486)
T 3pqa_A 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK 252 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence 999999998 999999999994 45689999997 999999999999999999887 899999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
|||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++++++.++++
T Consensus 253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~ 331 (486)
T 3pqa_A 253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVE 331 (486)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999995 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 316 DDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
++. +|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| +|||+++|++++||++||||+|.+++
T Consensus 332 ~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a 407 (486)
T 3pqa_A 332 KAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKS 407 (486)
T ss_dssp HHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHH
T ss_pred HHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHH
Confidence 985 67899999975 6899999999 9999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+++++. ..| +..|.||+||+.
T Consensus 408 ~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~ 446 (486)
T 3pqa_A 408 LKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREG 446 (486)
T ss_dssp HHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCC
Confidence 999999999999999987643 223 667899999874
No 28
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.6e-87 Score=679.74 Aligned_cols=418 Identities=25% Similarity=0.307 Sum_probs=387.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++ |+..++
T Consensus 39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~ 115 (517)
T 3r31_A 39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT 115 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999887 899999
Q ss_pred HHHHHHHHHHHh---hccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 84 TSIKSALKELKH---WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 84 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
+.++++++..+. +......+. ..+. .+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 116 ~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 191 (517)
T 3r31_A 116 SGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191 (517)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCS
T ss_pred HHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHH
Confidence 999999988876 222222111 1233 889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
++..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++||
T Consensus 192 t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dA 271 (517)
T 3r31_A 192 GALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDA 271 (517)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCC
Confidence 999999999999 99999999999778899999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++
T Consensus 272 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a 350 (517)
T 3r31_A 272 DIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKG 350 (517)
T ss_dssp CHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999999
Q ss_pred h-hCCeeeecCc-cC---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 K-VSGKIVHGGE-RD---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~-~~~~v~~gg~-~~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
. +|+++++||. .+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 351 ~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 430 (517)
T 3r31_A 351 KAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430 (517)
T ss_dssp HHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHH
Confidence 5 6889999993 11 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
+++++++++++|+|+||+++... ..| +..+.||+||+
T Consensus 431 ~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~ 469 (517)
T 3r31_A 431 RAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRE 469 (517)
T ss_dssp HHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCB
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcC
Confidence 99999999999999999965332 122 55788999987
No 29
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.8e-86 Score=669.89 Aligned_cols=421 Identities=21% Similarity=0.325 Sum_probs=393.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 94 (462)
T 3etf_A 16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSA 94 (462)
T ss_dssp TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.++... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 170 (462)
T 3etf_A 95 ALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ 170 (462)
T ss_dssp HHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 9999999998887655411 112456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence 999999998 99999999999888889999987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-h
Q 013901 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-V 319 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 319 (434)
.|++.+++++| +|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++. +
T Consensus 251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 329 (462)
T 3etf_A 251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAE 329 (462)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHC
Confidence 99999999999 9999999999999999999999999999999999999995 5889999999999999999999985 6
Q ss_pred CCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 320 SGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 320 ~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++++++
T Consensus 330 ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~ 409 (462)
T 3etf_A 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMA 409 (462)
T ss_dssp TCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHH
T ss_pred CCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 7899999974 457999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 399 ETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++|+|+||++.... ..| +..+.||+||+.
T Consensus 410 ~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~ 443 (462)
T 3etf_A 410 ARLECGGVFINGYSASDARVAFGGVKKSGFGREL 443 (462)
T ss_dssp HHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBS
T ss_pred HhCCcceEEECCCCCCCCCCCcCCcCCCCCCccc
Confidence 99999999999865432 222 567899999884
No 30
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=9.2e-87 Score=674.00 Aligned_cols=421 Identities=23% Similarity=0.348 Sum_probs=390.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 113 (487)
T 2w8n_A 35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSA 113 (487)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++++.+.. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 190 (487)
T 2w8n_A 114 FFLEWFSEEARRVYGDI-IHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190 (487)
T ss_dssp HHHHHHHHHGGGCCCEE-ECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-cccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999998887743322 1111 12456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEe---C-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~---~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.|++++.++ +|+|++|+++ | +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|
T Consensus 191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence 999999999 9999999999 7 556788999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhc-ccCCCCC-CCCcccccCCHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELEN-FYGKNPL-ESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|++++++ +++|+|. +++++||++++.+++++.++++
T Consensus 271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 349 (487)
T 2w8n_A 271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVN 349 (487)
T ss_dssp SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999 9999996 5889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCc-ccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 316 DDK-VSGKIVHGGERDKNKL-RIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~-~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++. +|+++++||..+..|+ |++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++
T Consensus 350 ~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~ 429 (487)
T 2w8n_A 350 DAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429 (487)
T ss_dssp HHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHH
T ss_pred HHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHH
Confidence 985 5779999998755688 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCc
Q 013901 394 KQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRS 429 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~ 429 (434)
++++++++++|+|+||+++.+. ..| +..+.||+||+
T Consensus 430 a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~ 467 (487)
T 2w8n_A 430 IWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGRE 467 (487)
T ss_dssp HHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCB
T ss_pred HHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCC
Confidence 9999999999999999977653 222 45788888887
No 31
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=4.6e-86 Score=670.96 Aligned_cols=422 Identities=17% Similarity=0.187 Sum_probs=387.3
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..++
T Consensus 46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 124 (500)
T 2j6l_A 46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV 124 (500)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999995 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++++.+.+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 125 ~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 201 (500)
T 2j6l_A 125 DICDYAVGLSRMIGGPI-LPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201 (500)
T ss_dssp HHHHHHHHHTTTCCCBE-ECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCcc-cccc--CCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence 99999998877654322 1110 11233577899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh----h-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCC
Q 013901 164 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 164 ~l~~~~~~----a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~d 237 (434)
.+++++.+ + +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|
T Consensus 202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d 281 (500)
T 2j6l_A 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED 281 (500)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence 99988765 4 99999999999777889999986 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 360 (500)
T 2j6l_A 282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEE 360 (500)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 48899999999999999999999
Q ss_pred hh-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 317 DK-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 317 a~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+. +|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++
T Consensus 361 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a 440 (500)
T 2j6l_A 361 AKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRI 440 (500)
T ss_dssp HHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 85 57899999976 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--hhcceeeEEECCCchh--hhhh-hhhhhcCCCCcc
Q 013901 395 QQFV--ETVSAGGLVINDTAVH--VIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~--~~~~~g~v~iN~~~~~--~~~~-~~~~~~~~~~~~ 430 (434)
++++ +++++|+|+||+++.+ ...| +..+.||+||+.
T Consensus 441 ~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~ 481 (500)
T 2j6l_A 441 FRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRES 481 (500)
T ss_dssp HHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEE
T ss_pred HHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcc
Confidence 9999 7799999999986543 1223 677999999884
No 32
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.2e-86 Score=671.32 Aligned_cols=422 Identities=24% Similarity=0.316 Sum_probs=391.2
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 110 (490)
T 2ve5_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999745999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.... .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~~~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~ 186 (490)
T 2ve5_A 111 DVLEYYAGLVPAIEGEQ-IPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEE-EEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccC---CCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 99999999887653322 111 13456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHH-hcccCceEEecCCCCceEEcCCCC
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAA-AKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~-~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
.|++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.+ ++++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dAD 266 (490)
T 2ve5_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCC
Confidence 999999999 99999999999 668899999997 99999999999999999999 889999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| .|+||.|+++++||||++++++|+++|++++.++++|+|. +++++||++++.+++++.++++++.
T Consensus 267 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~ 345 (490)
T 2ve5_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGK 345 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999995 5789999999999999999999985
Q ss_pred -hCCeeeecCccC-----CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 319 -VSGKIVHGGERD-----KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 319 -~~~~v~~gg~~~-----~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 346 ~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 425 (490)
T 2ve5_A 346 AQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425 (490)
T ss_dssp HTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred HCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 678999999762 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||++..+. ..| +..+.||+||+.
T Consensus 426 ~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~ 465 (490)
T 2ve5_A 426 RAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGREN 465 (490)
T ss_dssp HHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBS
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcc
Confidence 99999999999999999865432 122 556888999873
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8e-86 Score=667.32 Aligned_cols=418 Identities=23% Similarity=0.366 Sum_probs=377.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..++
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 111 (478)
T 3ty7_A 32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL 111 (478)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999557999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++.+.... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (478)
T 3ty7_A 112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183 (478)
T ss_dssp HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 99999999988765532 1245788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||++|||+
T Consensus 184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 263 (478)
T 3ty7_A 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI 263 (478)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence 999999999 99999999999 557889999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
+.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++++++++.++++++.
T Consensus 264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~ 342 (478)
T 3ty7_A 264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE 342 (478)
T ss_dssp HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999996 5889999999999999999999984
Q ss_pred hCCeeeecCcc-C---CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 319 VSGKIVHGGER-D---KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 319 ~~~~v~~gg~~-~---~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
+|+++++||.. . ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 343 ~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a 422 (478)
T 3ty7_A 343 EGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETL 422 (478)
T ss_dssp HTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 68899999943 2 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECCCchhhhhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVINDTAVHVIML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~~~~~~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+.......| +..+.||+||+.
T Consensus 423 ~~~~~~l~~G~v~vN~~~~~~~~PfGG~k~SG~G~~~ 459 (478)
T 3ty7_A 423 HKVARSIEAGTVEINEAGRKPDLPFGGYKQSGLGREW 459 (478)
T ss_dssp HHHHHHSCSSEEEETTCC-------------------
T ss_pred HHHHHhCCcCeEEECCCCCCCCCCcCCcCcCcCCccc
Confidence 999999999999999944333333 667899999873
No 34
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.2e-85 Score=664.86 Aligned_cols=419 Identities=23% Similarity=0.333 Sum_probs=388.0
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+..+. .|+..++
T Consensus 15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~ 92 (474)
T 4h7n_A 15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFL 92 (474)
T ss_dssp TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999986443 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
..+++++....++.+....... ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 9999999888887665433222 12334567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
.+.+++.++ +|+|++++++|+.+.+..|+.| +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||++.
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~ 249 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL 249 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence 999999998 9999999999988889999876 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-hC
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK-VS 320 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~ 320 (434)
|++.+++++| +|+||.|++++|||||++++++|+++|+++..++++|+|. +++++||++++.+.+++.++++++. +|
T Consensus 250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~g 328 (474)
T 4h7n_A 250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKG 328 (474)
T ss_dssp HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhC
Confidence 9999999999 9999999999999999999999999999999999999996 5889999999999999999999985 67
Q ss_pred CeeeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q 013901 321 GKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFV 398 (434)
Q Consensus 321 ~~v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 398 (434)
++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 408 (474)
T 4h7n_A 329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVA 408 (474)
T ss_dssp CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHH
T ss_pred ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 7899998764 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCchhhhhh----hhhhhcCCCC
Q 013901 399 ETVSAGGLVINDTAVHVIML----ALLKNHTLLR 428 (434)
Q Consensus 399 ~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~ 428 (434)
+++++|+|+||+.+++...+ +..+.||+|+
T Consensus 409 ~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~ 442 (474)
T 4h7n_A 409 RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG 442 (474)
T ss_dssp TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC
T ss_pred HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC
Confidence 99999999999988776543 4568888873
No 35
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=8.7e-86 Score=666.04 Aligned_cols=418 Identities=22% Similarity=0.322 Sum_probs=387.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 105 (475)
T 1euh_A 27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA 105 (475)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCC----Ccc-eEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCC
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~ 158 (434)
+.+++++++++.+.+... +.. ..+ ... +++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 106 ~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t 182 (475)
T 1euh_A 106 EIINYAAEEGLRMEGEVL-EGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182 (475)
T ss_dssp HHHHHHHHHHTTCCEEEE-EGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred HHHHHHHHHHHHhcCCcc-cCC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence 999999998887654421 111 122 345 899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 159 ~~~~~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
|.++..+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||+
T Consensus 183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence 99999999999999 999999999996 45788999997 999999999999999999887 89999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++.+++++.++++
T Consensus 261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~ 339 (475)
T 1euh_A 261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLIN 339 (475)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999999966889999999999999999999
Q ss_pred Hhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013901 316 DDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLK 394 (434)
Q Consensus 316 ~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~ 394 (434)
++. +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.+++
T Consensus 340 ~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~ 417 (475)
T 1euh_A 340 DANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 417 (475)
T ss_dssp HHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHH
T ss_pred HHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHH
Confidence 985 57799999976 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeEEECC-Cchhh-hhh-hhhhhcCCCCcc
Q 013901 395 QQFVETVSAGGLVIND-TAVHV-IML-ALLKNHTLLRSC 430 (434)
Q Consensus 395 ~~~~~~~~~g~v~iN~-~~~~~-~~~-~~~~~~~~~~~~ 430 (434)
+++++++++|+|+||+ +..+. ..| +..|.||+||+.
T Consensus 418 ~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~ 456 (475)
T 1euh_A 418 FGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQG 456 (475)
T ss_dssp HHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBS
T ss_pred HHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCc
Confidence 9999999999999998 65442 222 556888998873
No 36
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=9.1e-86 Score=668.33 Aligned_cols=420 Identities=19% Similarity=0.290 Sum_probs=386.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhh-hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~-~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+..|+++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~ 119 (501)
T 1uxt_A 41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 119 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 6788999999999999999999999999 99999999999999999999999999999999999999999997 799999
Q ss_pred HHHHHHHHHHHHhhccccccccccccC--CCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChH
Q 013901 83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~ 160 (434)
++.+++++++++.+.+.. .+...... +...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 120 ~~~l~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 120 VDRLRLAELDLKKIGGDY-IPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHTGGGGGGGTCCEE-EESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHhcCcc-ccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 999999988887764322 11110011 225689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCC
Q 013901 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (434)
Q Consensus 161 ~~~~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~da 238 (434)
++..+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.+.+.++ +||+++|+|||||+||++||
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 276 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA 276 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence 999999999999 99999999999667788999996 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a 355 (501)
T 1uxt_A 277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDA 355 (501)
T ss_dssp CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 588999999999999999999998
Q ss_pred h-hCCeeeecCccCCCC-cccccEEEEeCC---CCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 318 K-VSGKIVHGGERDKNK-LRIAPTLLLDVP---RDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 318 ~-~~~~v~~gg~~~~~~-~~~~Ptv~~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
. +|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|++|||+++|++++||++||||+|.+
T Consensus 356 ~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 433 (501)
T 1uxt_A 356 VEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVV 433 (501)
T ss_dssp HHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHH
T ss_pred HHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHH
Confidence 5 57799999976 67 999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCc-hh-hhhh-hhhhhcCCCCcc
Q 013901 393 LKQQFVETVSAGGLVINDTA-VH-VIML-ALLKNHTLLRSC 430 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~-~~-~~~~-~~~~~~~~~~~~ 430 (434)
+++++++++++|+|+||+++ .. ...| +..+.||+||+.
T Consensus 434 ~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 434 KIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp HHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred HHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 99999999999999999873 21 1222 557889999873
No 37
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.3e-85 Score=665.17 Aligned_cols=421 Identities=20% Similarity=0.282 Sum_probs=374.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..++
T Consensus 31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 109 (485)
T 4dng_A 31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTI 109 (485)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH-
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~- 162 (434)
+.++++++..+.+.+.. .+.. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 110 ~~~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 110 AILDEAMTYTGELGGVK-EVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHGGGCSCEE-CCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHhCCee-cccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 99999998887543321 1111 11235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad 239 (434)
..|.+++.++ +|+|++|+++|+. +.+..|++|+ +|.|.||||+.+|+.+.+.+++++||+++|+|||||+||++|||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD 267 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence 9999999999 9999999999965 5889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh
Q 013901 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK 318 (434)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~ 318 (434)
++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~ 346 (485)
T 4dng_A 268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAK 346 (485)
T ss_dssp HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999996 5889999999999999999999985
Q ss_pred -hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q 013901 319 -VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQF 397 (434)
Q Consensus 319 -~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 397 (434)
+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||+++|||+|.++++++
T Consensus 347 ~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~ 424 (485)
T 4dng_A 347 TDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424 (485)
T ss_dssp HTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHH
T ss_pred HCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 67899999976 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 398 VETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 398 ~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 425 ~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~ 460 (485)
T 4dng_A 425 ALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFG 460 (485)
T ss_dssp HTTSCSSEEEESCC----------------------
T ss_pred HHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccc
Confidence 999999999999987652 222 567899999873
No 38
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.3e-85 Score=667.07 Aligned_cols=420 Identities=23% Similarity=0.336 Sum_probs=378.4
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~ 115 (508)
T 3r64_A 37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAG 115 (508)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHH-
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~- 162 (434)
+.+++++...+...+ ..+.. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 116 ~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 116 NITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999988877665333 11111 01235678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhc--ccCceEEecCCCCceEEcCC
Q 013901 163 SLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG 237 (434)
Q Consensus 163 ~~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~--~~~p~~~e~gG~~~~iv~~d 237 (434)
..+++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+.+|+.+.+.+++ ++||+++|+|||||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 9999999999 999999999995 78899999997 9999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHH
Q 013901 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDD 316 (434)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~ 316 (434)
||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 351 (508)
T 3r64_A 273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIEL 351 (508)
T ss_dssp SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 58899999999999999999999
Q ss_pred hh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 317 DK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 317 a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
+. +|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++++||++||||+|.++++
T Consensus 352 a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 429 (508)
T 3r64_A 352 AKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAA 429 (508)
T ss_dssp HHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHH
T ss_pred HHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHH
Confidence 95 67899999976 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhh--hhh-hhhhhcCCCCcc
Q 013901 396 QFVETVSAGGLVINDTAVHV--IML-ALLKNHTLLRSC 430 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~--~~~-~~~~~~~~~~~~ 430 (434)
++++++++|+|+||+++.+. ..| +..+.||+||+.
T Consensus 430 ~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~ 467 (508)
T 3r64_A 430 QFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFN 467 (508)
T ss_dssp HHHTTSCSSEEEECC--------------------CCC
T ss_pred HHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCc
Confidence 99999999999999987652 222 567899999873
No 39
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.3e-84 Score=657.46 Aligned_cols=418 Identities=20% Similarity=0.276 Sum_probs=385.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 107 (490)
T 3ju8_A 29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV 107 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++..+.+.+..... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (490)
T 3ju8_A 108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183 (490)
T ss_dssp HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence 99999998888765543211 12345677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCce-EEecCCCCceEEcCCCCH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL 240 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~-~~e~gG~~~~iv~~dad~ 240 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.+.+.++++++|+ ++|+|||||+||++|||+
T Consensus 184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence 999999999 99999999999888899999997 999999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCc-HHHHHHHHHHHHhcccCCC-CC-CCCcccccCCHHHHHHHHHHHHHh
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLLESLKNELENFYGKN-PL-ESKDLSRIVNSNHFARLSKLLDDD 317 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~-~~~~~gpl~~~~~~~~~~~~i~~a 317 (434)
+.|++.+++++| +|+||.|++++++|||+++ +++|+++|+++++++++|+ |. +++++||++++++++++.++++++
T Consensus 264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a 342 (490)
T 3ju8_A 264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHL 342 (490)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999996 9999999999999999999 75 588999999999999999999998
Q ss_pred h-hCCeeeecCcc-CCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 318 K-VSGKIVHGGER-DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 318 ~-~~~~v~~gg~~-~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
. +|+++++||.. +.+|+|++|||+. ++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++
T Consensus 343 ~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~ 421 (490)
T 3ju8_A 343 IGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE 421 (490)
T ss_dssp HHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHH
T ss_pred HHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHH
Confidence 5 67899999865 3479999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh--hh-hhhhhcCCCC
Q 013901 396 QFVETVSAGGLVINDTAVHVI--ML-ALLKNHTLLR 428 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~--~~-~~~~~~~~~~ 428 (434)
++++++++|+|+||+++.+.. .| +..+.||+++
T Consensus 422 ~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~~ 457 (490)
T 3ju8_A 422 QFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHR 457 (490)
T ss_dssp HHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSSC
T ss_pred HHHHhcCcceEEECCCcCCCCCCCCcCCccccchhH
Confidence 999999999999999765321 12 3456666554
No 40
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.7e-85 Score=661.92 Aligned_cols=420 Identities=20% Similarity=0.270 Sum_probs=385.5
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
+++.+++++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 108 (486)
T 1t90_A 30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI 108 (486)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999999999996 7999999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++...+.+.+. ..... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 109 ~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 185 (486)
T 1t90_A 109 ENVEFAAGAPSLMMGD-SLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185 (486)
T ss_dssp HHHHHHTTHHHHHCEE-EEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCc-ccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 9999987655443322 11111 12345688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHH
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~ 241 (434)
.+++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~ 265 (486)
T 1t90_A 186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265 (486)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence 999999999 99999999999778889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCccCCCCE-EEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhh-
Q 013901 242 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDK- 318 (434)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~- 318 (434)
.|++.+++++| .|+||.|+++++ ||||++ +++|+++|+++++++++|+|. +++++||++++.+++++.++++++.
T Consensus 266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~ 343 (486)
T 1t90_A 266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLE 343 (486)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999 999999999999 999999 999999999999999999995 5889999999999999999999984
Q ss_pred hCCeeeecCccC--CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q 013901 319 VSGKIVHGGERD--KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQ 396 (434)
Q Consensus 319 ~~~~v~~gg~~~--~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~ 396 (434)
+|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++
T Consensus 344 ~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~ 423 (486)
T 1t90_A 344 EGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRY 423 (486)
T ss_dssp HTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHH
T ss_pred CCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHH
Confidence 688999999742 358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCchh--hhhh-hhhhhcCCC--Cc
Q 013901 397 FVETVSAGGLVINDTAVH--VIML-ALLKNHTLL--RS 429 (434)
Q Consensus 397 ~~~~~~~g~v~iN~~~~~--~~~~-~~~~~~~~~--~~ 429 (434)
+++++++|+|+||++... ...| +..+.||+| |+
T Consensus 424 ~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~ 461 (486)
T 1t90_A 424 FRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHA 461 (486)
T ss_dssp HHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCS
T ss_pred HHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCcc
Confidence 999999999999985432 1122 557888888 66
No 41
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.4e-84 Score=661.19 Aligned_cols=421 Identities=18% Similarity=0.221 Sum_probs=384.8
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhc-HHHHHHHHHhhcCCCchhhhHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYEVALLK 83 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~a~~~ei~~~~ 83 (434)
++.+++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++ +++|+.++++|+|||..+++..++..++
T Consensus 88 ~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~ 167 (563)
T 4e3x_A 88 AHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELI 167 (563)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999998 9999999999999999999754499999
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.++++++.++++.+....... .....+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 168 ~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~ 243 (563)
T 4e3x_A 168 DFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASY 243 (563)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHH
Confidence 9999999999888764432211 122345667778999999999999999999999999 699999999999999999
Q ss_pred HHHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCc------eEEecCCCCceEE
Q 013901 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVVF 234 (434)
Q Consensus 164 ~l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p------~~~e~gG~~~~iv 234 (434)
.+++++.++ +|+|+||+++|+ .+.++.|++|+ +|.|.||||+.+|+.|.+.+++++|| +++|+|||||+||
T Consensus 244 ~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV 323 (563)
T 4e3x_A 244 AVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFV 323 (563)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceee
Confidence 999999999 999999999995 45789999997 99999999999999999999998885 9999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCC-CC-CCcccccCCHHHHHHHHH
Q 013901 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNP-LE-SKDLSRIVNSNHFARLSK 312 (434)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~-~~~~gpl~~~~~~~~~~~ 312 (434)
++|||++.|++.+++++| .|+||.|++++|||||++++++|+++|+++++++++|+| .+ ++++||++++.+++++.+
T Consensus 324 ~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~ 402 (563)
T 4e3x_A 324 HSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKK 402 (563)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999999999 64 789999999999999999
Q ss_pred HHHHhh--hCCeeeecCccC-CCCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHH-hcCCCCcEEEE
Q 013901 313 LLDDDK--VSGKIVHGGERD-KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDII-NSGTKPLAAYL 386 (434)
Q Consensus 313 ~i~~a~--~~~~v~~gg~~~-~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~i 386 (434)
+|++++ .|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+| ++|||+++ |+++|||+++|
T Consensus 403 ~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V 482 (563)
T 4e3x_A 403 WLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAV 482 (563)
T ss_dssp HHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEE
T ss_pred HHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEE
Confidence 999996 477999999764 4689999999999999999999999999999999997 79999999 78999999999
Q ss_pred ecCCHHHHHHHHhhcc--eeeEEECCCchhhhh---h-hhhhhcCCC-Ccc
Q 013901 387 FTNNKKLKQQFVETVS--AGGLVINDTAVHVIM---L-ALLKNHTLL-RSC 430 (434)
Q Consensus 387 ~t~d~~~~~~~~~~~~--~g~v~iN~~~~~~~~---~-~~~~~~~~~-~~~ 430 (434)
||+|.+++++++++++ +|+|+||+.+++... | +..+.||+| |++
T Consensus 483 ~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~ 533 (563)
T 4e3x_A 483 FAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533 (563)
T ss_dssp ECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTT
T ss_pred EeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccC
Confidence 9999999999999976 999999997655432 2 567888988 553
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.5e-82 Score=680.50 Aligned_cols=419 Identities=17% Similarity=0.241 Sum_probs=390.9
Q ss_pred cchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHH
Q 013901 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (434)
Q Consensus 5 ~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~ 84 (434)
++.+++++.++..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+.+++.|+|||..++. .|+..+++
T Consensus 556 ~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid 634 (1026)
T 4f9i_A 556 SEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAID 634 (1026)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHH
T ss_pred CceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999997 69999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++.+++.+.++..... ..+..+++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 635 ~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~ 711 (1026)
T 4f9i_A 635 FLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711 (1026)
T ss_dssp HHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHH
Confidence 99999999988765443221 134567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-cCCCcEEEEeCC-hHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHh------cccCceEEecCCCCceEEc
Q 013901 165 LAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 165 l~~~~~~a-lp~g~v~~i~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~------~~~~p~~~e~gG~~~~iv~ 235 (434)
+++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+.+|+.|.+.++ +++||+++|+|||||+||+
T Consensus 712 l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~ 791 (1026)
T 4f9i_A 712 LVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIID 791 (1026)
T ss_dssp HHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEEC
T ss_pred HHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEEC
Confidence 99999999 999999999995 56789999997 999999999999999999988 4689999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLL 314 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i 314 (434)
+|||++.|++.+++|+| .|+||.|++++++|||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|
T Consensus 792 ~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i 870 (1026)
T 4f9i_A 792 DDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYA 870 (1026)
T ss_dssp TTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 588999999999999999999
Q ss_pred HHhhhCCeeeecCccCCC-CcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 315 DDDKVSGKIVHGGERDKN-KLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 315 ~~a~~~~~v~~gg~~~~~-~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++++..+++++||..+.. |+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 871 ~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~ 950 (1026)
T 4f9i_A 871 EIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEH 950 (1026)
T ss_dssp HHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHH
T ss_pred HHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHH
Confidence 999755599999987555 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchhhhhh----hhhhhcCCCC
Q 013901 394 KQQFVETVSAGGLVINDTAVHVIML----ALLKNHTLLR 428 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~~~~~----~~~~~~~~~~ 428 (434)
++++++++++|+|+||+.+++...+ +..+.||+|+
T Consensus 951 a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~ 989 (1026)
T 4f9i_A 951 LAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT 989 (1026)
T ss_dssp HHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC
T ss_pred HHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC
Confidence 9999999999999999987664322 5578888884
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.7e-81 Score=641.41 Aligned_cols=421 Identities=16% Similarity=0.199 Sum_probs=374.7
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHh-hhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A-~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+++++..+ .|+++++++|++| |+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~ 108 (534)
T 2y53_A 31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGG 108 (534)
T ss_dssp TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 677889999987 8999999999999 5999999999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcccccc--cc--ccccCCC-cceEeeecc-eEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCC
Q 013901 83 KTSIKSALKELKHWMTPEKA--KT--SITTFPS-SAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (434)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~-~~~~~~~P~-GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~ 156 (434)
++.+++++...+.+...... +. +....+. ..+++++|+ |||++|+|||||+...++++++||++||+||+|||+
T Consensus 109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999887665321110 00 1000111 357889997 999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhh--cCCCcEEEEeCChHhHHHHhcC--CCCeEEEeCChHHHHHHHHHHh--cccCceEEecCCCC
Q 013901 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS 230 (434)
Q Consensus 157 ~~~~~~~~l~~~~~~a--lp~g~v~~i~~~~~~~~~L~~~--~v~~v~ftGs~~~~~~v~~~~~--~~~~p~~~e~gG~~ 230 (434)
.+|+++..+++++.++ +|+|++|+++|+.. .+.++ .+|.|.||||+.+|+.|.+.++ +++||+++|+||||
T Consensus 189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~ 265 (534)
T 2y53_A 189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265 (534)
T ss_dssp GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence 9999999999999997 69999999998532 24433 4899999999999999998875 78999999999999
Q ss_pred ceEEcCCC-----CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCH
Q 013901 231 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNS 304 (434)
Q Consensus 231 ~~iv~~da-----d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~ 304 (434)
|+||++|| |++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~ 344 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSR 344 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCH
T ss_pred eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCH
Confidence 99999999 99999999999999 9999999999999999999999999999999999999996 48899999999
Q ss_pred HHHHHHHHHHHHhhhCCeeeecCccC-------CCCcccccEEEEeCCCC--CCccccccccceeeEeecC---CH----
Q 013901 305 NHFARLSKLLDDDKVSGKIVHGGERD-------KNKLRIAPTLLLDVPRD--SLIMSEEIFGPLLPILTVD---KI---- 368 (434)
Q Consensus 305 ~~~~~~~~~i~~a~~~~~v~~gg~~~-------~~~~~~~Ptv~~~~~~~--~~~~~~E~fgPvl~v~~~~---~~---- 368 (434)
.+++++.++|+++.+|+++++||... ..|+|++|||+.+++++ |++++||+||||++|++|+ |+
T Consensus 345 ~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~ 424 (534)
T 2y53_A 345 EQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALP 424 (534)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCC
Confidence 99999999999987788999999742 35899999999999987 6899999999999999999 99
Q ss_pred -HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEECCCchh----------hhhh-hhhhhcCCCCcc
Q 013901 369 -EDSFDIINSGTKPLAAYLFTNNKKLKQQFVETV--SAGGLVINDTAVH----------VIML-ALLKNHTLLRSC 430 (434)
Q Consensus 369 -~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~--~~g~v~iN~~~~~----------~~~~-~~~~~~~~~~~~ 430 (434)
+|||+++|+++|||++||||+|.++++++++++ ++|+|+||+++.+ ...| +..|.||+||+.
T Consensus 425 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~ 500 (534)
T 2y53_A 425 EAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEEL 500 (534)
T ss_dssp THHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEE
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCc
Confidence 999999999999999999999999999999999 8999999986532 1222 667899999983
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.4e-79 Score=658.82 Aligned_cols=411 Identities=19% Similarity=0.274 Sum_probs=379.7
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 013901 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (434)
Q Consensus 11 ~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~ 90 (434)
++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|+.+++.|+|||..++. .|+..+++.+++++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999996 79999999999999
Q ss_pred HHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHH
Q 013901 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~ 170 (434)
...+.+.+...... ...+..++++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.
T Consensus 623 ~~a~~~~g~~~~~~--~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 623 AQGRKLFGSETAMP--GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHSSCEECC--CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHhhcCcccccc--CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 99888755321111 1134577899999999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcc---cCceEEecCCCCceEEcCCCCHHHHHH
Q 013901 171 EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACR 245 (434)
Q Consensus 171 ~a-lp~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~---~~p~~~e~gG~~~~iv~~dad~~~aa~ 245 (434)
++ +|+|+||+++|+.+.+..|++|+ +|.|+||||+.+|+.|.+.++++ ++|+++|+|||||+||++|||++.|++
T Consensus 701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~ 780 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD 780 (1001)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence 98 99999999999655589999997 99999999999999999998864 799999999999999999999999999
Q ss_pred HHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHhhhCCeee
Q 013901 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDDKVSGKIV 324 (434)
Q Consensus 246 ~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~ 324 (434)
.+++|+| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.++|+++...+++
T Consensus 781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v- 858 (1001)
T 3haz_A 781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL- 858 (1001)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-
T ss_pred HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-
Confidence 9999999 9999999999999999999999999999999999999996 588999999999999999999999766688
Q ss_pred ecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc
Q 013901 325 HGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDK--IEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS 402 (434)
Q Consensus 325 ~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~ 402 (434)
+||..+..|+|+.|||+.. +++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+++++++++++
T Consensus 859 ~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~ 936 (1001)
T 3haz_A 859 HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQ 936 (1001)
T ss_dssp EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCC
Confidence 9988766799999999974 6788999999999999999986 79999999999999999999999999999999999
Q ss_pred eeeEEECCCchhhhh---h-hhhhhcCCCC
Q 013901 403 AGGLVINDTAVHVIM---L-ALLKNHTLLR 428 (434)
Q Consensus 403 ~g~v~iN~~~~~~~~---~-~~~~~~~~~~ 428 (434)
+|+|+||+.+++... | +..+.||+|+
T Consensus 937 aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~ 966 (1001)
T 3haz_A 937 VGNIYVNRNMIGAVVGVQPFGGNGLSGTGP 966 (1001)
T ss_dssp CSEEEESSCSCCCCTTTSCBCCCGGGBCCC
T ss_pred eeeEEEeCCCcCCCCCCCCCCCcccCcCCC
Confidence 999999998766532 2 5678899994
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-79 Score=626.59 Aligned_cols=416 Identities=16% Similarity=0.199 Sum_probs=372.7
Q ss_pred ccchhh-cccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~~-~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.++ +++..+..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 127 (528)
T 3v4c_A 49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT 127 (528)
T ss_dssp CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 577888 999999999999999999999999999999999999999999999999999999999999999987 699999
Q ss_pred HHHHHHHHHHHHh--hcccccc---ccccccCCCcceEeeecceEEEEEcCCchhHHhhH--hHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKH--WMTPEKA---KTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~vVlkps 155 (434)
++.++++++.++. +..+... +......+...+++++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps 207 (528)
T 3v4c_A 128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207 (528)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence 9999999999887 4332211 00001122456889999999999999999999865 899999999999999999
Q ss_pred CCChHHHHHHHHHHH----hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc--CceEEec
Q 013901 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~----~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~--~p~~~e~ 226 (434)
+.+|.++..+++++. ++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++ ||+++|+
T Consensus 208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl 287 (528)
T 3v4c_A 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL 287 (528)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence 999999999998765 45 99999999999 568889999997 999999999999999999999998 9999999
Q ss_pred CCCCceEEcCCC---CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCCCCcccccC
Q 013901 227 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIV 302 (434)
Q Consensus 227 gG~~~~iv~~da---d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~ 302 (434)
|||||+||++|| |++.|++.+++++| .|+||.|+++++||||++ ++++|+++|++++++++.+ +.+||++
T Consensus 288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~ 361 (528)
T 3v4c_A 288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGI 361 (528)
T ss_dssp CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHH
T ss_pred CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC-----CCCCHHH
Confidence 999999999999 88999999999999 999999999999999998 9999999999999998754 6799999
Q ss_pred CHHHHHHHHHHHHHhhhCCeeeecCccCCCCcccccEEEEeCCCC---CCccccccccceeeEeecCCHHHHHHHHhcCC
Q 013901 303 NSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (434)
Q Consensus 303 ~~~~~~~~~~~i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 379 (434)
+++..+++.++++ ..|+++++||.. .|+|++|||+.+++++ |++++||+||||++|++|+|++|||+++|+++
T Consensus 362 ~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~ 437 (528)
T 3v4c_A 362 AKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437 (528)
T ss_dssp HHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCC
Confidence 8887777777764 467899999976 7999999999988887 89999999999999999999999999999999
Q ss_pred CCcEEEEecC--CHHHHHHHHhhcc--eeeEEECCCchhh----hhh-hh-hhhcCCCCcc
Q 013901 380 KPLAAYLFTN--NKKLKQQFVETVS--AGGLVINDTAVHV----IML-AL-LKNHTLLRSC 430 (434)
Q Consensus 380 ~gl~~~i~t~--d~~~~~~~~~~~~--~g~v~iN~~~~~~----~~~-~~-~~~~~~~~~~ 430 (434)
|||+++|||+ |.+++++|+++++ +|+|+||+++++. ..| +. .+.||+||+.
T Consensus 438 ~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~ 498 (528)
T 3v4c_A 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGAT 498 (528)
T ss_dssp CEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCC
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCC
Confidence 9999999999 8899999999998 9999999976532 222 44 7888888863
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=5.6e-79 Score=620.95 Aligned_cols=412 Identities=16% Similarity=0.205 Sum_probs=368.0
Q ss_pred ccchh-hcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHH
Q 013901 4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (434)
Q Consensus 4 ~~~~~-~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~ 82 (434)
+++.+ ++++.++..|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+
T Consensus 16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~ 94 (510)
T 1ez0_A 16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 94 (510)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 67788 7999999999999999999999999999999999999999999999999999999999999998885 699999
Q ss_pred HHHHHHHHHHHHh--hccccccc-cccc-cCC-CcceEeeecceEEEEEcCCchhHHhhH--hHHHHHHhhCCEEEEeCC
Q 013901 83 KTSIKSALKELKH--WMTPEKAK-TSIT-TFP-SSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (434)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~-~~~~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~~~~AL~aGN~vVlkps 155 (434)
++.++++++.+++ +.++.... .+.. ..+ ...+++++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps 174 (510)
T 1ez0_A 95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174 (510)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence 9999999998886 54432110 0000 011 235789999999999999999999854 999999999999999999
Q ss_pred CCChHHHHHHHHHHH----hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhccc--CceEEec
Q 013901 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (434)
Q Consensus 156 ~~~~~~~~~l~~~~~----~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~--~p~~~e~ 226 (434)
+.+|.++..+++++. ++ +|+|++|+++| +.+.+..|++|+ +|.|.||||+.+|+.|.+.+++++ ||+++|+
T Consensus 175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL 254 (510)
T 1ez0_A 175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence 999999999999985 45 89999999999 667889999997 999999999999999999999886 9999999
Q ss_pred CCCCceEEcCCCCHH--HHHHHHHHHhcccCCCCccCCCCEEEEeCC-cHHHHHHHHHHHHhcccCCCCCCCCcccccCC
Q 013901 227 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLLESLKNELENFYGKNPLESKDLSRIVN 303 (434)
Q Consensus 227 gG~~~~iv~~dad~~--~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~ 303 (434)
|||||+||++|||++ .|++.+++++| .|+||.|+++++||||++ ++++|+++|++++++++. ||+++
T Consensus 255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---------gp~~~ 324 (510)
T 1ez0_A 255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---------STLLT 324 (510)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---------BCCSS
T ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---------CCCCC
Confidence 999999999999999 99999999999 999999999999999999 999999999999999864 58888
Q ss_pred HHHHHHHHHHHHHhh--hCCeeeecCccCCCCcccccEEEEeCCCC---CCccccccccceeeEeecCCHHHHHHHHhcC
Q 013901 304 SNHFARLSKLLDDDK--VSGKIVHGGERDKNKLRIAPTLLLDVPRD---SLIMSEEIFGPLLPILTVDKIEDSFDIINSG 378 (434)
Q Consensus 304 ~~~~~~~~~~i~~a~--~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 378 (434)
+.+.+++.++++++. .|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|+|++|||+++|++
T Consensus 325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~ 401 (510)
T 1ez0_A 325 PGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML 401 (510)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC
Confidence 889999999999886 4679999987 3899999999988777 9999999999999999999999999999999
Q ss_pred CCCcEEEEecCCH--HHHHHHHhhc--ceeeEEECCCchh----hhhh-hh-hhhcCCCCc
Q 013901 379 TKPLAAYLFTNNK--KLKQQFVETV--SAGGLVINDTAVH----VIML-AL-LKNHTLLRS 429 (434)
Q Consensus 379 ~~gl~~~i~t~d~--~~~~~~~~~~--~~g~v~iN~~~~~----~~~~-~~-~~~~~~~~~ 429 (434)
++||++||||+|. ++++++++++ ++|+|+||+++++ ...| +. .+.+|+|+.
T Consensus 402 ~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~ 462 (510)
T 1ez0_A 402 AGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAS 462 (510)
T ss_dssp CCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSC
T ss_pred CCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCC
Confidence 9999999999987 7899999999 7999999987642 1222 33 466777754
No 47
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.4e-73 Score=573.88 Aligned_cols=378 Identities=18% Similarity=0.166 Sum_probs=307.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHHHHHH-HHHHHHHHHHH
Q 013901 18 AASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSALKE 92 (434)
Q Consensus 18 ~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ei~~-~~~~~~~~~~~ 92 (434)
.+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8876579998 89999999999
Q ss_pred HHhhcccccccccc-c----cCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHH
Q 013901 93 LKHWMTPEKAKTSI-T----TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (434)
Q Consensus 93 ~~~~~~~~~~~~~~-~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~ 167 (434)
++.+.......+.. . ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 98876432210010 0 01335688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----h----h-cCCCcEEEEeCCh-HhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 168 LVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 168 ~~~----~----a-lp~g~v~~i~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
++. + + +|+|++|+++ +. +.+..|..|+ +|.|.||||+.+|+.+.+.+ +||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 7 9999999999 65 5788899997 99999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccC---CCCCCCCcccccCCHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~ 313 (434)
|||++.|++.+++++| +|+| .|+++++||||+++ ++|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999987 76522 344
Q ss_pred -HHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013901 314 -LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 314 -i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~ 392 (434)
++++. ++++||. | ++||++ ++++|.+++||+||||++|++|+|++|||+++|++++||+++|||+|.+
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 55554 4677875 4 789887 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEECCCchhh-hhh-h-----hhhhcCCCCccc
Q 013901 393 LKQQFVETVSAGGLVINDTAVHV-IML-A-----LLKNHTLLRSCI 431 (434)
Q Consensus 393 ~~~~~~~~~~~g~v~iN~~~~~~-~~~-~-----~~~~~~~~~~~~ 431 (434)
+++++++++++|+|+||+++.+. ..| + ..++||+||++.
T Consensus 379 ~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~G~ 424 (468)
T 1vlu_A 379 NAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGP 424 (468)
T ss_dssp HHHHHHHHCCCSEEEESSCGGGCC----------------------
T ss_pred HHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCCcc
Confidence 99999999999999999876542 223 4 688899998743
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-72 Score=567.14 Aligned_cols=381 Identities=14% Similarity=0.188 Sum_probs=332.4
Q ss_pred hhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHH
Q 013901 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (434)
Q Consensus 8 ~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~ 87 (434)
+..++..+.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+..+++..+...+.+.
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~-- 80 (464)
T 3k9d_A 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKH-- 80 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHH--
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH--
Confidence 456677889999999999999999999999999999999999999999999999999999999988865444333333
Q ss_pred HHHHHHHhhccccccccc-cccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHH
Q 013901 88 SALKELKHWMTPEKAKTS-ITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (434)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~ 166 (434)
+..++......+. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++
T Consensus 81 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~ 155 (464)
T 3k9d_A 81 -----VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETV 155 (464)
T ss_dssp -----HHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH
T ss_pred -----HHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHH
Confidence 3333332211111 1123567788999999999999999999999999999999999999999999999998866
Q ss_pred HH----HHhh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecC-CCCceEEcCCC
Q 013901 167 KL----VGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGI 238 (434)
Q Consensus 167 ~~----~~~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~g-G~~~~iv~~da 238 (434)
++ +.++ +|+|+||++++ +.+.+..|++|+ +|.|.||||+.. .+.+++++||+ +|+| ||+|+||++||
T Consensus 156 ~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dA 230 (464)
T 3k9d_A 156 RIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSA 230 (464)
T ss_dssp HHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTS
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCC
Confidence 54 5677 99999999999 578899999997 999999999984 56677788999 6777 99999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHH-------hcccCCCCC--CCCcccccCCHHHHHH
Q 013901 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNEL-------ENFYGKNPL--ESKDLSRIVNSNHFAR 309 (434)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~--~~~~~gpl~~~~~~~~ 309 (434)
|++.|++.+++|+| +|+||.|+++++||||+++|++|+++|+++. .++++|+|. +++++||+++.+++++
T Consensus 231 Dl~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~ 309 (464)
T 3k9d_A 231 NIPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQH 309 (464)
T ss_dssp CHHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHH
T ss_pred CHHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHH
Confidence 99999999999999 9999999999999999999999999999986 345677774 4789999999999999
Q ss_pred HHHHHHHhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHH----HHHhcCCCCcEE
Q 013901 310 LSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSF----DIINSGTKPLAA 384 (434)
Q Consensus 310 ~~~~i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~ 384 (434)
+.++++.+. .|+++++||.. ++++++++ .+|+||||++|++|+|++||| +++|++++||++
T Consensus 310 i~~~~~~a~~~ga~vl~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a 375 (464)
T 3k9d_A 310 IANLAGLTVPADARVLIAEET-------------KVGAKIPY-SREKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375 (464)
T ss_dssp HHHHTTCCCCTTCCEEEEECC-------------CCSTTCGG-GSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEcCCC-------------CCCCCCcc-cccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence 999998774 67899999853 45777875 489999999999999999997 799999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEECCCchhh
Q 013901 385 YLFTNNKKLKQQFVETVSAGGLVINDTAVHV 415 (434)
Q Consensus 385 ~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~ 415 (434)
+|||+|.+++++|++++++|+|+||+++.|.
T Consensus 376 ~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~ 406 (464)
T 3k9d_A 376 IIHSEDKEIIREFALKKPVSRLLVNTPGALG 406 (464)
T ss_dssp EEECSCHHHHHHHHHHSSEEEEEESSCHHHH
T ss_pred EEEeCCHHHHHHHHHhCCEeEEEEECCcccc
Confidence 9999999999999999999999999998874
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3e-72 Score=563.78 Aligned_cols=380 Identities=18% Similarity=0.193 Sum_probs=323.0
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCchhhhHHHHHHHHHHHHHHH
Q 013901 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (434)
Q Consensus 11 ~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ei~~~~~~~~~~~ 90 (434)
++..+.+++++++++|++||+.|+.+|.++|.++|+++++.+++++++|++++++|+|||..+++..|+..+.+.+.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~--- 77 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIY--- 77 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH---
Confidence 35678999999999999999999999999999999999999999999999999999999999987546555444442
Q ss_pred HHHHhhcccccccccc-ccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHH
Q 013901 91 KELKHWMTPEKAKTSI-TTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 91 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~ 169 (434)
.++......+.. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++
T Consensus 78 ----~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 78 ----NKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp ----HHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred ----HHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 222222111111 112345788999999999999999999999999999999999999999999999999988887
Q ss_pred H----hh-cCCCcEEEEeC-ChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHH
Q 013901 170 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (434)
Q Consensus 170 ~----~a-lp~g~v~~i~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~ 242 (434)
. ++ +|+|++|++++ +.+.++.|++|+ +|.|.||||+..+ +.+++++||+++|+|||+|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 6 56 99999999999 678899999997 9999999999854 456678899999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhh-hCC
Q 013901 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK-VSG 321 (434)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~ 321 (434)
|++.+++|+| +|+||.|+++++||||+++||+|+++|+++ +||++++++.+++.++++++. .++
T Consensus 230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999 999999999999999999999999999875 489999999999999998653 345
Q ss_pred eeeecCccC----CCCcccccEE-------EEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCC----CCcEEEE
Q 013901 322 KIVHGGERD----KNKLRIAPTL-------LLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT----KPLAAYL 386 (434)
Q Consensus 322 ~v~~gg~~~----~~~~~~~Ptv-------~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~~i 386 (434)
++ +||... ..|+|++||+ +.++++++++.+ |+||||++|++|+|++|||+++|++. +||+++|
T Consensus 295 ~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i 372 (452)
T 3my7_A 295 KI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGL 372 (452)
T ss_dssp GG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred eE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEE
Confidence 55 577542 3589999997 567888998765 89999999999999999999999974 9999999
Q ss_pred ecCCHHHHHH---HHhhcceeeEEECCCchhhhhh
Q 013901 387 FTNNKKLKQQ---FVETVSAGGLVINDTAVHVIML 418 (434)
Q Consensus 387 ~t~d~~~~~~---~~~~~~~g~v~iN~~~~~~~~~ 418 (434)
||+|.+.+++ |++++++|+|+||+++.+....
T Consensus 373 ~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G 407 (452)
T 3my7_A 373 YTNQDVNADRIRYFGDKMKTARILINIPTTHGGIG 407 (452)
T ss_dssp ESCTTTCHHHHHHHHHHCCCSEEEESCCCC-----
T ss_pred EcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccc
Confidence 9999877777 9999999999999988776443
No 50
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.2e-71 Score=554.44 Aligned_cols=376 Identities=20% Similarity=0.160 Sum_probs=302.8
Q ss_pred ccchhhcccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhc-------CCCch----
Q 013901 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL---- 72 (434)
Q Consensus 4 ~~~~~~~~~~~~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~-------Gk~~~---- 72 (434)
+++.+++++..+..++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+ |||..
T Consensus 16 tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~ 95 (463)
T 2h5g_A 16 ENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLS 95 (463)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhh
Confidence 6888999999999999999999999999999999999999999999999999999999999999 69987
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEE
Q 013901 73 ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVL 152 (434)
Q Consensus 73 ~a~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVl 152 (434)
++. .|+..+++.++++++.++++.++.. +......+...+++++|+|||++|+||| |.... +++++||++||+||+
T Consensus 96 ~a~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVl 171 (463)
T 2h5g_A 96 LST-SKLNSLAIGLRQIAASSQDSVGRVL-RRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLL 171 (463)
T ss_dssp CCH-HHHHHHHHHHHHHHHHCTTSTTCEE-EEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEE
T ss_pred hhH-HHHHHHHHHHHHHHHhhHhhcCccc-ccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEE
Confidence 454 7999999999999988877765431 1110012335688999999999999776 66655 799999999999999
Q ss_pred eCCCCChHHHHHHHHHHHhhc----CCCcEEEEeCChHhHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecC
Q 013901 153 KPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227 (434)
Q Consensus 153 kps~~~~~~~~~l~~~~~~al----p~g~v~~i~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~g 227 (434)
|||+.+|.++..|++++.+++ |+|+||+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ +||+++|+|
T Consensus 172 Kps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElG 249 (463)
T 2h5g_A 172 KGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSE 249 (463)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSC
T ss_pred ECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecC
Confidence 999999999999999999986 5999999998656788999997 999999999999999999887 899999999
Q ss_pred CCCceEEcCCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHH
Q 013901 228 GKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHF 307 (434)
Q Consensus 228 G~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~ 307 (434)
||||+||++|||++.|++.+++++| .| ||.|+++++||||+++++ ||+ +
T Consensus 250 Gk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-----~ 298 (463)
T 2h5g_A 250 GICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TPL-----F 298 (463)
T ss_dssp CCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SHH-----H
T ss_pred CcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hHH-----H
Confidence 9999999999999999999999999 98 999999999999999998 232 2
Q ss_pred HHHHHHHHHhh-hCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEE
Q 013901 308 ARLSKLLDDDK-VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYL 386 (434)
Q Consensus 308 ~~~~~~i~~a~-~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i 386 (434)
+ ++++++. +|++++.|+.....++|+ +++|++++||+||||++|++|+|++|||+++|++++||+++|
T Consensus 299 ~---~~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v 367 (463)
T 2h5g_A 299 D---QIIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVI 367 (463)
T ss_dssp H---HHHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEE
T ss_pred H---HHHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEE
Confidence 2 3455554 577877444322234432 578999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEECCCchhh-hhh-hhhhhcCCC
Q 013901 387 FTNNKKLKQQFVETVSAGGLVINDTAVHV-IML-ALLKNHTLL 427 (434)
Q Consensus 387 ~t~d~~~~~~~~~~~~~g~v~iN~~~~~~-~~~-~~~~~~~~~ 427 (434)
||+|.++++++++++++|+|+||+++.+. ..| +..+.||+|
T Consensus 368 ~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G 410 (463)
T 2h5g_A 368 VTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGIS 410 (463)
T ss_dssp ECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCC
Confidence 99999999999999999999999876432 222 556888888
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.4e-68 Score=535.62 Aligned_cols=353 Identities=18% Similarity=0.199 Sum_probs=290.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhHH-------HHHHHHH
Q 013901 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIY-------EVALLKT 84 (434)
Q Consensus 16 ~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ei~~~~~ 84 (434)
.+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+. .+++.. |+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999985 355433 5666777
Q ss_pred HHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHH
Q 013901 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (434)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~ 164 (434)
.+++++.+.+.. +. ..+......+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~-g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-GE-MSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-TC-EEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-Cc-cCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 776665443211 11 111110112456789999999999999998 8 5889999999999999999999999999999
Q ss_pred HHHHH----Hhh-cCCCcEEEEeC-ChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEcC
Q 013901 165 LAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (434)
Q Consensus 165 l~~~~----~~a-lp~g~v~~i~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~ 236 (434)
+++++ .++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+++.+.+.+ +||+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 566 99999999998 544 566677786 99999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccC---CCCCCCCcccccCCHHHHHHHHHH
Q 013901 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYG---KNPLESKDLSRIVNSNHFARLSKL 313 (434)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~gpl~~~~~~~~~~~~ 313 (434)
|||++.|++.+++++| .|+| .|+++++||||++++++|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH----------------HHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH----------------HHHH
Confidence 9999999999999999 9999 9999999999999999999999999999887 6542 2456
Q ss_pred HHHhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013901 314 LDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKL 393 (434)
Q Consensus 314 i~~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 393 (434)
++++.. | ++ +++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.++
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 665421 1 11 24678999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeEEECCCchh
Q 013901 394 KQQFVETVSAGGLVINDTAVH 414 (434)
Q Consensus 394 ~~~~~~~~~~g~v~iN~~~~~ 414 (434)
++++++++++|+|+||+++.+
T Consensus 379 a~~~a~~l~aG~V~vN~~~~~ 399 (444)
T 4ghk_A 379 AMRFLREVDSASVMVNASTRF 399 (444)
T ss_dssp HHHHHHHCCSSEEEEEECGGG
T ss_pred HHHHHHhCCcceEEEcCCCcc
Confidence 999999999999999997654
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=4.5e-68 Score=529.31 Aligned_cols=365 Identities=17% Similarity=0.219 Sum_probs=307.1
Q ss_pred CHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCCc----hhhhH-------HHHHHHH
Q 013901 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLK 83 (434)
Q Consensus 15 ~~~~v~~a~~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ei~~~~ 83 (434)
..+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+. .++.. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 345799999999999999999999999999999999999999999999999999986 55532 4788888
Q ss_pred HHHHHHHHHHHhhccccccccccccCCCcceEeeecceEEEEEcCCchhHHhhHhHHHHHHhhCCEEEEeCCCCChHHHH
Q 013901 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (434)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~ 163 (434)
+.+++++++.+. .+. ..+......+...+++++|+|||++|+||| +...++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~l~~~a~~~~~-~g~-~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-VGE-VIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-TTC-EEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-cCc-cccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 888877654432 111 111000011344688999999999999885 4788999999999999999999999999999
Q ss_pred HHHHHHH----hh-cCCCcEEEEeC-ChH-hHHHHhcCC-CCeEEEeCChHHHHHHHHHHhcccCceEEecCCCCceEEc
Q 013901 164 LLAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (434)
Q Consensus 164 ~l~~~~~----~a-lp~g~v~~i~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~ 235 (434)
.+++++. ++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+|+.+.+.+ +||+++|+|||||+||+
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 9999998 45 89999999998 444 566677786 99999999999999999887 49999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 013901 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLD 315 (434)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~ 315 (434)
+|||++.|++.+++++| .|+| .|+++++||||++++|+|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 99999999999999999 9999 99999999999999999999999999987542
Q ss_pred HhhhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013901 316 DDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQ 395 (434)
Q Consensus 316 ~a~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~ 395 (434)
++||... .+ |+ |||. +.++.+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++
T Consensus 298 --------~~gg~~~-~~-~~-Ptl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 --------VRGCEKT-RE-IV-PDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp --------EEECHHH-HH-HS-TTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred --------eecChhh-hh-hC-Cccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233211 12 33 8862 457889999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEECCCchhhh-hh-hhhhhcCCC
Q 013901 396 QFVETVSAGGLVINDTAVHVI-ML-ALLKNHTLL 427 (434)
Q Consensus 396 ~~~~~~~~g~v~iN~~~~~~~-~~-~~~~~~~~~ 427 (434)
++++++++|+|+||++..+.. .| +..+.||+|
T Consensus 364 ~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g 397 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGIS 397 (427)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEE
T ss_pred HHHHhCCccEEEECCCCccCCCCCCCCccccccc
Confidence 999999999999998765321 12 445677775
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=96.61 E-value=0.54 Score=45.10 Aligned_cols=321 Identities=16% Similarity=0.142 Sum_probs=168.6
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHhhcCC-C------chhhhHHHHHHH--------HHHHHHHHHHHHhh
Q 013901 32 SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDK-P------ELESSIYEVALL--------KTSIKSALKELKHW 96 (434)
Q Consensus 32 ~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk-~------~~~a~~~ei~~~--------~~~~~~~~~~~~~~ 96 (434)
.|+..+.++-.+.++.+-+.++++.|+-+...++..-+ . +.-. ..|+..+ .+.++.+.++.+.|
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 45555666666777777777777766655444443221 1 1111 1244333 23345555666666
Q ss_pred ccccccccc-c-ccCCCcceEeeecceEEEEEcCCc---hhHHhhHhHHHHHHhhCCEE-E-EeCCCCChHHHHHHHHHH
Q 013901 97 MTPEKAKTS-I-TTFPSSAEIVPEPFGVVLIISPWN---YPFLLSLDPVVGAIAAGNAL-V-LKPSEVAPASSSLLAKLV 169 (434)
Q Consensus 97 ~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~~~~AL~aGN~v-V-lkps~~~~~~~~~l~~~~ 169 (434)
...+..... . ...+.....++.|+--|+++.|.- || ++.+..++||-.+|+.= | ..|++....-...|+.+-
T Consensus 105 h~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~ 183 (423)
T 4gic_A 105 AERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAY 183 (423)
T ss_dssp HHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHH
T ss_pred HHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHH
Confidence 544432221 1 123445567888999999999963 55 44555789999999973 3 334432211122222111
Q ss_pred HhhcCCCcEEEEe-CChHhHHHHhc---C-C-CCeEEEeCChHHHHHHHHHHhcccCceEEec-CCCCceEE--cCCCCH
Q 013901 170 GEYMDLSSIRVVE-GAVAETSALLD---Q-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINL 240 (434)
Q Consensus 170 ~~alp~g~v~~i~-~~~~~~~~L~~---~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~-gG~~~~iv--~~dad~ 240 (434)
. .|+=.+.. |+.+...+|.= . + ||.|+=.|+.=+...= +... ..+-..+ .|.+=+.| ++++|.
T Consensus 184 l----~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK-r~v~---g~VgIDm~AGPSEilViAD~~a~p 255 (423)
T 4gic_A 184 I----SGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAK-KLVF---GQVGIDMVAGPSEILVISDGRTDP 255 (423)
T ss_dssp H----HTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHB---TTBEECCCCCCCEEEEEECSCSCH
T ss_pred h----cCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHH-HHhc---CCcCcccccccceEEEEeCCCCCH
Confidence 1 12223332 34455555531 2 3 9999988876554221 2221 1122222 34444333 556899
Q ss_pred HHHHHHHHHHhcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhC
Q 013901 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVS 320 (434)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 320 (434)
+..+-.++--+= .+. ..+.++|..+ ++|.+++.+++.++.-. +... +...+-++
T Consensus 256 ~~vAaDLlsQAE-Hd~-----~a~~iLvT~s--~~la~~V~~~i~~~l~~----------l~r~---~i~~~sl~----- 309 (423)
T 4gic_A 256 DWIAMDLFSQAE-HDE-----DAQAILISPD--AAHLEAVQASIERLLPG----------MERA---EVIRTSLE----- 309 (423)
T ss_dssp HHHHHHHHHHHT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHGGG----------CTTH---HHHHHHHH-----
T ss_pred HHHHHHHHHhhc-cCC-----CCeEEEEeCc--HHHHHHHHHHHHHHHhh----------CccH---HHHHHHHh-----
Confidence 999988887775 332 2345667666 66666666666553211 1111 11111111
Q ss_pred CeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh
Q 013901 321 GKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVET 400 (434)
Q Consensus 321 ~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~ 400 (434)
-+| .++.++|++|+++++|..-.- -.-|.++|.. .+..+
T Consensus 310 ----------------------------------~~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~ 348 (423)
T 4gic_A 310 ----------------------------------RRG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVES 348 (423)
T ss_dssp ----------------------------------HHC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGG
T ss_pred ----------------------------------cCc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhh
Confidence 011 255679999999999995333 3678888876 56677
Q ss_pred cc-eeeEEECCCchhh------hhhhhhhhcCCCCc
Q 013901 401 VS-AGGLVINDTAVHV------IMLALLKNHTLLRS 429 (434)
Q Consensus 401 ~~-~g~v~iN~~~~~~------~~~~~~~~~~~~~~ 429 (434)
++ +|.|++..++.-. ...+.|.++|..|.
T Consensus 349 i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~ 384 (423)
T 4gic_A 349 IRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARF 384 (423)
T ss_dssp CCCCSEEEEC----------------CCCCTTGGGT
T ss_pred CcEeceeecCCCCchhhhhcCcCCCccCCCCCcccc
Confidence 76 8999997644222 23356666666554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=85.93 E-value=25 Score=33.75 Aligned_cols=313 Identities=17% Similarity=0.197 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHhhcCCC----chhhhHHHHHHH--------HHHHHHHHHHHHhhcccccccc-c
Q 013901 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKP----ELESSIYEVALL--------KTSIKSALKELKHWMTPEKAKT-S 105 (434)
Q Consensus 39 ~~R~~~l~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~ei~~~--------~~~~~~~~~~~~~~~~~~~~~~-~ 105 (434)
.+-.+.++.+-+.++++.|+-+...++...+. +.-. ..|+..+ .+.++.+.++.+.|...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 44555666677777777776555555544321 1111 1344433 3445555666666665553321 1
Q ss_pred c-ccCCCcceEeeecceEEEEEcCC---chhHHhhHhHHHHHHhhCCEEEEe--CCCCChHHHHHHHHHHHhhcCCCcEE
Q 013901 106 I-TTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALVLK--PSEVAPASSSLLAKLVGEYMDLSSIR 179 (434)
Q Consensus 106 ~-~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~~~~AL~aGN~vVlk--ps~~~~~~~~~l~~~~~~alp~g~v~ 179 (434)
. ...|-....++.|+.-|+++.|. -|| ++.+..++||-.+|+.=|+. |+.-.|.+ |+..- -.|+=.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~AA~----l~Gv~e 180 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADEI---LYAAQ----LCGVQD 180 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHHH---HHHHH----HTTCCE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHHH---HHHHH----HcCCCE
Confidence 1 11233455678899999999998 355 45566789999999875544 44222222 21111 113222
Q ss_pred EEe-CChHhHHHHh---cC-C-CCeEEEeCChHHHHHHHHHHhcccCceEEec-CCCCceEE--cCCCCHHHHHHHHHHH
Q 013901 180 VVE-GAVAETSALL---DQ-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINLKVACRRMIMG 250 (434)
Q Consensus 180 ~i~-~~~~~~~~L~---~~-~-v~~v~ftGs~~~~~~v~~~~~~~~~p~~~e~-gG~~~~iv--~~dad~~~aa~~i~~~ 250 (434)
+.. |+.+...+|. +. + ||.|+=.|..=+... .+........|-..+ .|.+=+.| +++||.+..+-.++--
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A-Kr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA-KRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH-HHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHH-HHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 332 3445555553 22 3 999998887654311 111100011122222 34444433 5568999999888877
Q ss_pred hcccCCCCccCCCCEEEEeCCcHHHHHHHHHHHHhcccCCCCCCCCcccccCCHHHHHHHHHHHHHhhhCCeeeecCccC
Q 013901 251 KWGCNNGQACISPDHIITTKDYAPKLLESLKNELENFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERD 330 (434)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~v~~gg~~~ 330 (434)
+= .+. ..+.++|..+ +++.+++.+++.++.-. +... +. ++
T Consensus 260 AE-Hd~-----~a~aiLvT~s--~~la~~V~~ev~~ql~~----------lpr~---~i----a~--------------- 299 (434)
T 1kae_A 260 AE-HGP-----DSQVILLTPA--ADMARRVAEAVERQLAE----------LPRA---ET----AR--------------- 299 (434)
T ss_dssp HT-TCT-----TCEEEEEESC--HHHHHHHHHHHHHHHTT----------CTTH---HH----HH---------------
T ss_pred hc-cCC-----CCcEEEEECC--HHHHHHHHHHHHHHHHh----------CChH---HH----HH---------------
Confidence 65 332 2345666655 56666666555543211 1110 11 11
Q ss_pred CCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEEC
Q 013901 331 KNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVS-AGGLVIN 409 (434)
Q Consensus 331 ~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~-~g~v~iN 409 (434)
+-+..- .++.++|++|+++++|..-.- -.-|.++|.. .+..+++ +|.|++.
T Consensus 300 -----------------------~sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 300 -----------------------QALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp -----------------------HHHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred -----------------------HHHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcC
Confidence 111122 466789999999999995443 3678898885 5566666 8999999
Q ss_pred CCchhh------hhhhhhhhcCCCCc
Q 013901 410 DTAVHV------IMLALLKNHTLLRS 429 (434)
Q Consensus 410 ~~~~~~------~~~~~~~~~~~~~~ 429 (434)
.++.-. ...+.|.++|..|.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~G~AR~ 377 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTYGYTAT 377 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCTTGGGT
T ss_pred CCCchhhcccccCCCcccCCCCceec
Confidence 755322 22255566665554
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=53.13 E-value=13 Score=32.59 Aligned_cols=46 Identities=9% Similarity=0.190 Sum_probs=35.4
Q ss_pred HhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHhhcCCCcEEEEeCC
Q 013901 137 LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGA 184 (434)
Q Consensus 137 ~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~alp~g~v~~i~~~ 184 (434)
+..++..+.+||-||++.+. +.....+..++...+|.|++++++.+
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s 66 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYS 66 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEE
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccc
Confidence 44567788999999999753 34555667778888999999998653
No 56
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=40.22 E-value=87 Score=23.16 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHh--hhCCeeeecCccCCCCcccccEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCC
Q 013901 302 VNSNHFARLSKLLDDD--KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (434)
Q Consensus 302 ~~~~~~~~~~~~i~~a--~~~~~v~~gg~~~~~~~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 379 (434)
.+++.+++..+..... +.|++++..|.. |.++.. +. .+-+.|+.|+|.+.|.++.|+-+
T Consensus 15 ~d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG-~~----------~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 15 RDSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEG-TA----------RARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEES-CC----------CSEEEEEEESSHHHHHHHHHSHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEec-CC----------cCeEEEEECCCHHHHHHHHcCHH
Confidence 3445554444444443 357787776543 233332 11 23678999999999999998743
No 57
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=34.90 E-value=62 Score=21.74 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=27.1
Q ss_pred HHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 013901 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60 (434)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~ 60 (434)
+.++...+.|..+|.++|..+.......-.++..++.
T Consensus 28 ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 28 EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667889999999999988776665555555543
No 58
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=33.47 E-value=88 Score=24.28 Aligned_cols=70 Identities=9% Similarity=0.143 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhhCCeeeecCccCC--CCcccc-----cEEEEeCCCCCCccccccccceeeEeecCCHHHHHHHHhcCC
Q 013901 307 FARLSKLLDDDKVSGKIVHGGERDK--NKLRIA-----PTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGT 379 (434)
Q Consensus 307 ~~~~~~~i~~a~~~~~v~~gg~~~~--~~~~~~-----Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 379 (434)
.+....+.++..+.+.++.|+...+ .+..+. |+|... + ..-..|..|=.. |+.++|.+||++++.+.+
T Consensus 32 ~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdG-P---faEtkE~lgG~~-iie~~s~deA~e~A~~~P 106 (124)
T 1s7i_A 32 VDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDG-P---FAETKEQLGGFY-LIEARDLNQALQIAAKIP 106 (124)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEES-C---SSCCSSEEEEEE-EEEESSHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecC-C---CcCCcccceeEE-EEEeCCHHHHHHHHHhCC
Confidence 3445556655555566665543321 122221 233222 1 111346665544 778999999999999876
Q ss_pred CC
Q 013901 380 KP 381 (434)
Q Consensus 380 ~g 381 (434)
..
T Consensus 107 ~~ 108 (124)
T 1s7i_A 107 PG 108 (124)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 59
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=32.96 E-value=33 Score=21.49 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhcHHHHHHHHHhhcC
Q 013901 41 RVSQLKSLMKMLNEREPDIVDALRQDLD 68 (434)
Q Consensus 41 R~~~l~~~a~~l~~~~~~l~~~~~~e~G 68 (434)
..++|..+.+.|.+-++++++++-.++.
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888999999999999988866643
No 60
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.47 E-value=1.4e+02 Score=21.97 Aligned_cols=38 Identities=5% Similarity=-0.235 Sum_probs=27.4
Q ss_pred HHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 013901 25 ELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDA 62 (434)
Q Consensus 25 ~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~ 62 (434)
.++...+.|..++.++|..+.......-+++..++..-
T Consensus 48 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y 85 (102)
T 2co9_A 48 VSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAY 85 (102)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455578999999999998877777666666555543
No 61
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.84 E-value=90 Score=22.20 Aligned_cols=37 Identities=8% Similarity=-0.222 Sum_probs=26.9
Q ss_pred HHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 013901 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60 (434)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~ 60 (434)
+.++...+.|..++.+++..+.......-.++..++.
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666789999999999988777766666655543
No 62
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=25.68 E-value=1.1e+02 Score=22.60 Aligned_cols=41 Identities=5% Similarity=-0.158 Sum_probs=31.9
Q ss_pred HHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 013901 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALR 64 (434)
Q Consensus 24 ~~A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~~~~~ 64 (434)
+.++...+.|..++.+++..+.......-+++..++..-..
T Consensus 36 eisK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 36 ERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44666778999999999999988877777777777765544
No 63
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.99 E-value=53 Score=25.90 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=30.0
Q ss_pred CcEEEEeCChH-hHHHHhc-CCCCeEEEeCChHHHHHHHHHHhcccCc
Q 013901 176 SSIRVVEGAVA-ETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTP 221 (434)
Q Consensus 176 g~v~~i~~~~~-~~~~L~~-~~v~~v~ftGs~~~~~~v~~~~~~~~~p 221 (434)
|.+.+++|+.+ .....+. .++.++++||+......+.+.+.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 45777767543 3334444 4588999999887777777776654444
No 64
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=22.92 E-value=1e+02 Score=21.15 Aligned_cols=31 Identities=6% Similarity=-0.157 Sum_probs=21.9
Q ss_pred HHHhhhhcCCCCHHHHHHHHHHHHHHHHhcH
Q 013901 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNERE 56 (434)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~ 56 (434)
++...+.|..+|.++|..+.......-.++.
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~ 66 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHR 66 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4555678999999999888766655444443
No 65
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=21.91 E-value=1.3e+02 Score=20.90 Aligned_cols=31 Identities=10% Similarity=-0.171 Sum_probs=22.3
Q ss_pred HHHhhhhcCCCCHHHHHHHHHHHHHHHHhcH
Q 013901 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNERE 56 (434)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~ 56 (434)
++...+.|..+|.++|..+.......-..+.
T Consensus 34 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~ 64 (80)
T 1gt0_D 34 SKRLGAEWKLLSETEKRPFIDEAKRLRALHM 64 (80)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4556678999999999988876665444443
No 66
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.77 E-value=45 Score=27.85 Aligned_cols=39 Identities=23% Similarity=0.425 Sum_probs=27.7
Q ss_pred ccccceeeEeecCCHHHHHHHH----hcCCCCcEEEEecCCHH
Q 013901 354 EIFGPLLPILTVDKIEDSFDII----NSGTKPLAAYLFTNNKK 392 (434)
Q Consensus 354 E~fgPvl~v~~~~~~~eai~~~----n~~~~gl~~~i~t~d~~ 392 (434)
|.||+..+..--.++++|++.+ .+...-|-.++++.+..
T Consensus 26 ~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~ 68 (178)
T 2ec4_A 26 SRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESV 68 (178)
T ss_dssp HHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCS
T ss_pred HHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCc
Confidence 4455555555557889999998 77667788899887643
No 67
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=20.28 E-value=1e+02 Score=22.22 Aligned_cols=35 Identities=9% Similarity=-0.174 Sum_probs=25.1
Q ss_pred HHHhhhhcCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 013901 26 LRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV 60 (434)
Q Consensus 26 A~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~l~ 60 (434)
++...+.|..++.++|..+.......-+++..++.
T Consensus 39 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~ 73 (92)
T 2crj_A 39 TKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELW 73 (92)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556789999999999888777665555555443
No 68
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=20.03 E-value=2.3e+02 Score=24.19 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=27.9
Q ss_pred cCCCcEEEEeC-ChHhHHHHhcCCCCeEEEeCChHHHHHHHHHHhc
Q 013901 173 MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK 217 (434)
Q Consensus 173 lp~g~v~~i~~-~~~~~~~L~~~~v~~v~ftGs~~~~~~v~~~~~~ 217 (434)
+.++.+-++ | ..+.....++..+..++.||+......+...+.+
T Consensus 118 ~~~~~ivIv-gdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 118 ISEGDIAIA-GDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp CCTTCEEEE-CSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEE-CCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence 445556555 5 3445555666778888888877666666655554
No 69
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=20.00 E-value=3.8e+02 Score=22.24 Aligned_cols=120 Identities=12% Similarity=0.049 Sum_probs=74.2
Q ss_pred ceEeeecc-eEEEEEcCCch-hHHhhHhHHHHHHhhCCEEEEeCCCCChHHHHHHHHHHHh-h-cCCCcEEEEeC-ChHh
Q 013901 113 AEIVPEPF-GVVLIISPWNY-PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-Y-MDLSSIRVVEG-AVAE 187 (434)
Q Consensus 113 ~~~~~~P~-GVv~~i~p~n~-P~~~~~~~~~~AL~aGN~vVlkps~~~~~~~~~l~~~~~~-a-lp~g~v~~i~~-~~~~ 187 (434)
...+.-|. |.++++...+. +-...+.+-...+++|..++- +.-|+ +.|.+ . +|-..++-++. +.+.
T Consensus 19 ~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 19 RYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp EEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHH
T ss_pred ceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCch
Confidence 33444454 77776666554 555556666777888998876 23344 44444 3 76444432221 2233
Q ss_pred HHHHhcC-CCCeEEEeCC-------hHHHHHHHHHHhcccCceEEecCCCCceEEcCCCCHHHHHHHHHHHhcccCCC
Q 013901 188 TSALLDQ-KWDKICYTGN-------SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNG 257 (434)
Q Consensus 188 ~~~L~~~-~v~~v~ftGs-------~~~~~~v~~~~~~~~~p~~~e~gG~~~~iv~~dad~~~aa~~i~~~~~~~~~G 257 (434)
...++.. .+|.|+||-+ ...+..+.+.+.....|+...+ ..|+.++.+.+ ++..
T Consensus 90 I~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail-~~~~ 151 (178)
T 1vmd_A 90 IGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPL-MNDV 151 (178)
T ss_dssp HHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGG-GGSC
T ss_pred HHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 4445544 5999999876 3356888999888777876543 56778888877 6654
Done!