Your job contains 1 sequence.
>013903
MLQSLVVPQSPINSSTAMKSKRVDRDDDDDNPNGDPSRAVAKRANVIEQEQKLQEQEEEA
EQHDVVVMEGESAGLRLLGLLLQCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAY
FAHALQARVVSSCLGTYSPLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQ
ALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLP
FDFNPLEGKIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITI
VEQDLSHGGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGG
PKRTGEVKVERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWK
DLSLLTASAWQPSD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013903
(434 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 1261 1.7e-128 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 1106 4.6e-112 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 312 2.8e-51 3
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 518 9.5e-50 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 494 3.3e-47 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 482 6.2e-46 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 470 1.2e-44 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 457 2.8e-43 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 269 3.0e-43 2
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 456 4.1e-43 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 418 3.7e-39 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 222 9.4e-34 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 304 2.5e-26 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 300 6.3e-26 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 300 6.7e-26 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 176 5.8e-23 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 278 6.4e-23 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 263 1.5e-20 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 263 1.6e-20 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 253 7.9e-19 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 245 3.5e-18 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 232 7.9e-17 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 231 9.0e-17 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 230 2.5e-16 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 225 8.9e-16 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 221 3.2e-15 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 217 4.9e-15 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 212 2.4e-14 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 132 4.9e-14 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 207 1.3e-13 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 200 6.5e-13 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 195 2.4e-12 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 95 0.00051 1
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
Identities = 259/364 (71%), Positives = 292/364 (80%)
Query: 83 QCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCL-GTYSPLT 141
QCAE VA D+L +A+ LL EISE+ SPF SSPERV AYFA ALQ RV+SS L G SPL+
Sbjct: 46 QCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYLSGACSPLS 105
Query: 142 TKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQW 201
K LT+ QSQKIF+ALQ+YNS+ PLIKFSHFTANQAIFQALDG D VHIIDLD+MQGLQW
Sbjct: 106 EKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQW 165
Query: 202 PGLFHILVSRSKKIRSMRITGFGSSSE-------RLADFAMSLGLPFDFNPLEGKIGNII 254
P LFHIL SR +K+RS+RITGFGSSS+ RLADFA SL LPF+F+P+EG IGN+I
Sbjct: 166 PALFHILASRPRKLRSIRITGFGSSSDLLASTGRRLADFASSLNLPFEFHPIEGIIGNLI 225
Query: 255 DVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQDLSH--GGSFL 312
D SQL R GE +VVHWM H LYD+TG++L TL +L L+P LIT+VEQ+LS+ GGSFL
Sbjct: 226 DPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFL 285
Query: 313 GRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERW 372
GRFVEALHYYSALFDALGDGLG +S ER TVEQ + G EIRNIVA GG +R K +W
Sbjct: 286 GRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRR----KRMKW 341
Query: 373 GEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAW-- 430
EEL RVGFRPVSL GNPA QA LLLGM PW GYTLVEENG L+LGWKDLSLLTASAW
Sbjct: 342 KEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWKS 401
Query: 431 QPSD 434
QP D
Sbjct: 402 QPFD 405
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 215/357 (60%), Positives = 270/357 (75%)
Query: 83 QCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTT 142
QCAE V+ DNL++A LL EIS+LS+P+ +S +RV AYF+ A+ AR+++SCLG Y+ L +
Sbjct: 296 QCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPS 355
Query: 143 KSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWP 202
+ + + S K+ +A Q +N I PL+KFSHFTANQAI +A + D VHIIDLDIMQGLQWP
Sbjct: 356 RWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWP 415
Query: 203 GLFHILVSRSKKIRSMRITGFGSSSE-------RLADFAMSLGLPFDFNPLEGKIGNIID 255
GLFHIL SR +R+TG G+S E RL+DFA LGLPF+F PL K+GN+ D
Sbjct: 416 GLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNL-D 474
Query: 256 VSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQDLSHGGSFLGRF 315
+L VR E + VHW+ H LYD+TGSD TL +L L PK++T+VEQDLSH GSFLGRF
Sbjct: 475 TERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQDLSHAGSFLGRF 534
Query: 316 VEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGEE 375
VEA+HYYSALFD+LG G +S ERH VEQQL EIRN++AVGGP R+GEVK E W E+
Sbjct: 535 VEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREK 594
Query: 376 LKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQP 432
+++ GF+ +SL+GN A QA+LLLGMFP GYTLV++NG LKLGWKDLSLLTASAW P
Sbjct: 595 MQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWTP 651
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 312 (114.9 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 82/224 (36%), Positives = 126/224 (56%)
Query: 220 ITGFGSSSERLADFAMSLGLPFDFNPL----EGKIGNIIDVSQLGVRP--GETIVVHWMH 273
+TG + +RL FA SLGL F F+ L E G ++ + L + GETI V+ +H
Sbjct: 222 VTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVH 281
Query: 274 --HCLYDITGSDLGT-LRMLTLLRPKLITIVEQDLSHGG-SFLGRFVEALHYYSALFDAL 329
H +++ G +G L + L +++T+ E++ +HG SFL RF EA+ +Y A+FD+L
Sbjct: 282 FLHKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSL 341
Query: 330 GDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVK-VERWGEELKRVGFRPVSLSG 388
L +S ER T+EQ+ FG EI ++VA +R + E W E +KR GF V +
Sbjct: 342 EATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGS 401
Query: 389 NPAAQASLLLGM-FPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 431
+QA LLL + +P +GY L N L LGW++ L + S+W+
Sbjct: 402 FALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 183 (69.5 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 46/99 (46%), Positives = 55/99 (55%)
Query: 161 NSICPLIKFSHFTANQAIFQALDGAD--CVHIIDLDIMQGLQWPGLFHILVSRSKKIRS- 217
N + P I+F H TANQAI A + D +HI+DLDI QGLQWP L L RS S
Sbjct: 150 NQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSP 209
Query: 218 ---MRITGFGS-------SSERLADFAMSLGLPFDFNPL 246
+RITG G + +RL FA SLGL F F+ L
Sbjct: 210 PPSLRITGCGRDVTGLNRTGDRLTRFADSLGLQFQFHTL 248
Score = 66 (28.3 bits), Expect = 2.8e-51, Sum P(3) = 2.8e-51
Identities = 23/70 (32%), Positives = 31/70 (44%)
Query: 85 AECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARV----VSSCLGTYSPL 140
A V+ N A +LL +S SSP S ER+ F AL R+ T +
Sbjct: 49 ANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRINRQQQDQTAETVATW 108
Query: 141 TTKSLTLSQS 150
TT +T+S S
Sbjct: 109 TTNEMTMSNS 118
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 132/384 (34%), Positives = 200/384 (52%)
Query: 65 VVVMEGESAXXXXXXXXXQCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHA 124
VV+++ + CAE + +NL+ A L+ + L+ + +V YFA A
Sbjct: 168 VVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQA 227
Query: 125 LQARVVSSCLGTYSPLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDG 184
L R+ Y+ T ++ S + + Y S CP +KF+HFTANQAI +A+
Sbjct: 228 LARRIYRD----YTAETDVCAAVNPSFEEVLEMHFYES-CPYLKFAHFTANQAILEAVTT 282
Query: 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFG----SSSE-------RLADF 233
A VH+IDL + QG+QWP L L R S R+TG G +S+ +LA F
Sbjct: 283 ARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQF 342
Query: 234 AMSLGLPFDFNPLEGKIGNIIDVSQLGVRP-GETIVVHWMH--HCLYDITGSDLGTLRML 290
A ++G+ F+F L + + ++ RP ET+VV+ + H L +GS L +
Sbjct: 343 AQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTV 402
Query: 291 TLLRPKLITIVEQDLSHGGS-FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFG 349
++P ++T+VEQ+ +H G FL RF EALHYYS+LFD+L D S +R E L G
Sbjct: 403 KAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYL-G 461
Query: 350 CEIRNIVAVGGPKRTGEVKVE-RWGEELKRVGFRPVSLSGNPAAQASLLLGMFPW-KGYT 407
+I N+VA G R + +W +K GF P+ L + QAS+LL ++ GY
Sbjct: 462 RQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYR 521
Query: 408 LVEENGCLKLGWKDLSLLTASAWQ 431
+ E +GCL +GW+ L+T SAW+
Sbjct: 522 VEENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 134/383 (34%), Positives = 194/383 (50%)
Query: 65 VVVMEGESAXXXXXXXXXQCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHA 124
VVV++ + CAE V +NL A L+ + L+S + +V YFA
Sbjct: 140 VVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEG 199
Query: 125 LQARVVSSCLGTYSPLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDG 184
L R+ Y + LS + Y S CP +KF+HFTANQAI +
Sbjct: 200 LARRI-------YRIYPRDDVALSSFSDTLQ-IHFYES-CPYLKFAHFTANQAILEVFAT 250
Query: 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSS----SE---RLADFAMSL 237
A+ VH+IDL + GLQWP L L R R+TG G S E +L A ++
Sbjct: 251 AEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTDIQEVGWKLGQLASTI 310
Query: 238 GLPFDFNPLEGKIGNIIDVS--QLGVRPG-ETIVVHWMH--HCLYDITGSDLGTLRMLTL 292
G+ F+F + + N+ D+ L +RPG E++ V+ + H L GS L +
Sbjct: 311 GVNFEFKSIA--LNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKS 368
Query: 293 LRPKLITIVEQDLSHGGS-FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLF-GC 350
+RP ++T+VEQ+ +H G+ FL RF E+LHYYS+LFD+L G S +R V +LF G
Sbjct: 369 IRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLE---GPPSQDR--VMSELFLGR 423
Query: 351 EIRNIVAVGGPKRTGEVK-VERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWK-GYTL 408
+I N+VA G R + + +W GF+PVS+ N QAS+LL ++ GY +
Sbjct: 424 QILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNV 483
Query: 409 VEENGCLKLGWKDLSLLTASAWQ 431
E GCL LGW+ L+ SAW+
Sbjct: 484 EENEGCLLLGWQTRPLIATSAWR 506
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 130/363 (35%), Positives = 192/363 (52%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTK 143
CAE V ++NL A L+ + L++ + +V YFA AL R+ Y +
Sbjct: 164 CAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRI-------YR-IHPS 215
Query: 144 SLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPG 203
+ + S + + Y+S CP +KF+HFTANQAI +A+ + VH+IDL + QG+QWP
Sbjct: 216 AAAIDPSFEEILQMNFYDS-CPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPA 274
Query: 204 LFHILVSRSKKIRSMRITGFGSSSER---------LADFAMSLGLPFDFNPLEGKIGNII 254
L L R S R+TG G+ S R LA A ++G+ F FN L + + +
Sbjct: 275 LMQALALRPGGPPSFRLTGVGNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDL 334
Query: 255 DVSQLGVRP-GETIVVHWMH--HCLYDITGSDLGTLRMLTLLRPKLITIVEQDLSHGGS- 310
+ R ET+VV+ + H + GS L + ++P L+T+VEQ+ +H G
Sbjct: 335 EPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDV 394
Query: 311 FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVK-V 369
FL RF EALHYYS+LFD+L DG+ S +R E L G +I N+VA G R + +
Sbjct: 395 FLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYL-GRQILNLVATEGSDRIERHETL 453
Query: 370 ERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPW-KGYTLVEENGCLKLGWKDLSLLTAS 428
+W + + GF PV+L + QASLLL + GY + E +G L L W+ L+ AS
Sbjct: 454 AQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAAS 513
Query: 429 AWQ 431
AW+
Sbjct: 514 AWK 516
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 126/388 (32%), Positives = 193/388 (49%)
Query: 65 VVVMEGESAXXXXXXXXXQCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHA 124
V++++ + CAE + +NL A L+ +I L+ + +V YFA A
Sbjct: 209 VILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEA 268
Query: 125 LQARVVSSCLGTYSPLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDG 184
L R+ P LS + + + Y + CP +KF+HFTANQAI +A +G
Sbjct: 269 LARRIYRLS----PPQNQIDHCLSDTLQ----MHFYET-CPYLKFAHFTANQAILEAFEG 319
Query: 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFG----SSSE-------RLADF 233
VH+ID + QGLQWP L L R + R+TG G +S+ +LA
Sbjct: 320 KKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQL 379
Query: 234 AMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGET--IVVHWMHHCLYDITGSDLGTLRMLT 291
A ++ + F++ +D S L +RP +T + V+ + L+ + G G ++L
Sbjct: 380 AEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFE-LHKLLGRPGGIEKVLG 438
Query: 292 L---LRPKLITIVEQDLSHGGS-FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQL 347
+ ++P + T+VEQ+ +H G FL RF E+LHYYS LFD+L G + + + +
Sbjct: 439 VVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE---GVPNSQDKVMSEVY 495
Query: 348 FGCEIRNIVAVGGPKRTGEVK-VERWGEELKRVGFRPVSLSGNPAAQASLLLGMF-PWKG 405
G +I N+VA GP R + + +WG G P L N QAS+LL +F +G
Sbjct: 496 LGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQG 555
Query: 406 YTLVEENGCLKLGWKDLSLLTASAWQPS 433
Y + E NGCL LGW L+T SAW+ S
Sbjct: 556 YRVEESNGCLMLGWHTRPLITTSAWKLS 583
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 125/387 (32%), Positives = 191/387 (49%)
Query: 65 VVVMEGESAXXXXXXXXXQCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHA 124
VV+++ + CAE V +NL A L+ +I L+ + + +V YFA A
Sbjct: 157 VVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEA 216
Query: 125 LQARVVSSCLGTYSPLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDG 184
L AR + + SP+ +LS + + + Y + CP +KF+HFTANQAI +A G
Sbjct: 217 L-ARRIYRLSPSQSPIDH---SLSDTLQ----MHFYET-CPYLKFAHFTANQAILEAFQG 267
Query: 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE-----------RLADF 233
VH+ID + QGLQWP L L R R+TG G + +LA
Sbjct: 268 KKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHL 327
Query: 234 AMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGE--TIVVHWMH--HCLYDITGSDLGTLRM 289
A ++ + F++ +D S L +RP E ++ V+ + H L G+ L +
Sbjct: 328 AEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGV 387
Query: 290 LTLLRPKLITIVEQDLSHGGS-FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLF 348
+ ++P++ T+VEQ+ +H FL RF E+LHYYS LFD+L G S + + +
Sbjct: 388 VNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLE---GVPSGQDKVMSEVYL 444
Query: 349 GCEIRNIVAVGGPKRTGEVK-VERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPW-KGY 406
G +I N+VA GP R + + +W GF + N QAS+LL +F +GY
Sbjct: 445 GKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGY 504
Query: 407 TLVEENGCLKLGWKDLSLLTASAWQPS 433
+ E +GCL LGW L+ SAW+ S
Sbjct: 505 RVEESDGCLMLGWHTRPLIATSAWKLS 531
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 269 (99.8 bits), Expect = 3.0e-43, Sum P(2) = 3.0e-43
Identities = 72/219 (32%), Positives = 115/219 (52%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLT-T 142
CA VA +L +A L ++S L+SP + +R+ AYF AL R++ S G Y L T
Sbjct: 61 CANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNAT 120
Query: 143 KSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWP 202
++ T + S++I + + + + P++K S+ N+AI +A++G VH+IDLD + QW
Sbjct: 121 QTRTNNVSEEI-HVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWL 179
Query: 203 GLFHILVSRSKKIRSMRITGFGSSSE-------RLADFAMSLGLPFDFNPLEGKIGNIID 255
L SR + +RITG E RL + A L +PF FNP+ ++ + ++
Sbjct: 180 ALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRL-DCLN 238
Query: 256 VSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLR 294
V QL V+ GE + V + L+ SD +R LR
Sbjct: 239 VEQLRVKTGEALAVSSVLQ-LHTFLASDDDLMRKNCALR 276
Score = 243 (90.6 bits), Expect = 3.0e-43, Sum P(2) = 3.0e-43
Identities = 56/141 (39%), Positives = 81/141 (57%)
Query: 293 LRPKLITIVEQDLSHGGSFL-GRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCE 351
L PK++ + EQD H GS L R +E+L+ Y+ALFD L + S +R VE+ LFG E
Sbjct: 339 LSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEE 398
Query: 352 IRNIVAVGG-PKRTGEVKVERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVE 410
I+NI++ G +R K+E+W + + GF V LS QA LL + GY + E
Sbjct: 399 IKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKE 458
Query: 411 ENGCLKLGWKDLSLLTASAWQ 431
E+GC + W+D L + SAW+
Sbjct: 459 ESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 456 (165.6 bits), Expect = 4.1e-43, P = 4.1e-43
Identities = 114/332 (34%), Positives = 171/332 (51%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSP-ERVGAYFAHALQARVVSSCLGTYSPLTT 142
C + + N+ + +L+SP +P R+ AY+ AL RV +
Sbjct: 281 CLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPP 340
Query: 143 KSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWP 202
+ + + NAL+ N + P+ KF HFTAN+ + +A +G + VHIID DI QGLQWP
Sbjct: 341 REFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWP 400
Query: 203 GLFHILVSRSKKIRSMRITGFGSSS-------ERLADFAMSLGLPFDFNPLEGKIGNIID 255
F L SR +RITG G S +RL FA ++ L F+F+P+ ++ ++
Sbjct: 401 SFFQSLASRINPPHHVRITGIGESKLELNETGDRLHGFAEAMNLQFEFHPVVDRLEDV-R 459
Query: 256 VSQLGVRPGETIVVHW---MHHCLYDITGSDLGT-LRMLTLLRPKLITIVEQDLSHGGSF 311
+ L V+ GE++ V+ MH LYD TG+ + L ++ P + + EQ+ H
Sbjct: 460 LWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQ 519
Query: 312 LG-RFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGE-VKV 369
L R +L YYSA+FDA+ L DS+ R VE+ LFG EIRNIVA G R V
Sbjct: 520 LETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGF 579
Query: 370 ERWGEELKRVGFRPVSLSGNPAAQASLLLGMF 401
W L+++GFR + +S Q+ +LL M+
Sbjct: 580 RHWRRMLEQLGFRSLGVSEREVLQSKMLLRMY 611
Score = 219 (82.2 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 62/175 (35%), Positives = 87/175 (49%)
Query: 272 MHHCLYDITGSDLGT-LRMLTLLRPKLITIVEQDLSHGGSFLG-RFVEALHYYSALFDAL 329
MH LYD TG+ + L ++ P + + EQ+ H L R +L YYSA+FDA+
Sbjct: 479 MHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAI 538
Query: 330 GDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGE-VKVERWGEELKRVGFRPVSLSG 388
L DS+ R VE+ LFG EIRNIVA G R V W L+++GFR + +S
Sbjct: 539 HTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSE 598
Query: 389 NPAAQASLLLGMFPW--KGYTLVEEN-----------GCLKLGWKDLSLLTASAW 430
Q+ +LL M+ +G+ VE + G + L W + L T SAW
Sbjct: 599 REVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 116/362 (32%), Positives = 182/362 (50%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTK 143
CA+ V+ +NL A + E+ + S +R+GAY L AR+ +S Y L ++
Sbjct: 57 CAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSR 116
Query: 144 SLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPG 203
+S + + + + +CP KF + +AN AI +A+ + +HIID I QG QW
Sbjct: 117 E---PESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIA 173
Query: 204 LFHILVSRSKKIRSMRITGFGSSS------ERLADFAMSLGLPFDFNPLEGKIGNIIDVS 257
L +R ++RITG G S +RL A +PF FN + + ++V
Sbjct: 174 LIQAFAARPGGAPNIRITGVGDGSVLVTVKKRLEKLAKKFDVPFRFNAVS-RPSCEVEVE 232
Query: 258 QLGVRPGETIVVH--WMHHCLYDITGSDLG----TLRMLTLLRPKLITIVEQDLSHGGS- 310
L VR GE + V+ +M H L D + S LRM+ L PK++T+VEQ+ + S
Sbjct: 233 NLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSP 292
Query: 311 FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV- 369
FL RF+E L YY+A+F+++ L + ER +EQ ++ NI+A G +R ++
Sbjct: 293 FLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELL 352
Query: 370 ERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASA 429
+W GF P LS +A LL + GY + E +G L LGW D L+++ A
Sbjct: 353 GKWKSRFSMAGFEPYPLSSIISATIRALLRDYS-NGYAIEERDGALYLGWMDRILVSSCA 411
Query: 430 WQ 431
W+
Sbjct: 412 WK 413
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 222 (83.2 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
Identities = 67/186 (36%), Positives = 96/186 (51%)
Query: 259 LGVRPGETIVVHWMHHCLYDITGSD--LGTLRMLTLLRPKLITIVEQDLSHGGSF----- 311
L P ET+ V+ + L+++ G D L+ + + P ++TI E++ GG
Sbjct: 258 LEFHPDETLAVNCVMF-LHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHID 316
Query: 312 -LGRFVE-ALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAV-GGPKRTGEVK 368
L R V A+ +YSA+F+AL + S ER VEQ++ G EI V GG G
Sbjct: 317 DLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWRG--- 373
Query: 369 VERWGEELKRVGFRPVSLSGNPAAQASLLLGM-FPWKGYTLVEENGCLKLGWKDLSLLTA 427
+ERWG + GF LS +QA LLL + +P +GY + E G LGW+ LL+
Sbjct: 374 IERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPLLSV 433
Query: 428 SAWQPS 433
SAWQPS
Sbjct: 434 SAWQPS 439
Score = 210 (79.0 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
Identities = 58/174 (33%), Positives = 87/174 (50%)
Query: 84 CAECVAMDNLDDATDLLPEI-SELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTT 142
CA+ + +L A + + +SP + +R+ +FA AL RV + G +
Sbjct: 57 CADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKA-GHGHVVVG 115
Query: 143 KSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWP 202
S A ++N I P ++F+H TANQAI +A+DGA VHI+DLD + G+QWP
Sbjct: 116 GGAARPASS---GAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWP 172
Query: 203 GLFHILVSRSKKIRS---MRITGFGSSSE-------RLADFAMSLGLPFDFNPL 246
L + R+ +R+TG G+ + RL FA S+ LPF F PL
Sbjct: 173 PLLQAIAERADPALGPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPL 226
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 304 (112.1 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 107/371 (28%), Positives = 176/371 (47%)
Query: 83 QCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTT 142
+CA+ V +L+ L+ ++ ++ S +R+GAY L AR+ SS Y L
Sbjct: 233 ECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRC 292
Query: 143 KSLT----LSQSQKIFNAL-------QSYN-SICPLIKFSHFTANQAIFQALDGADCVHI 190
K T L+ ++ A +S N +I +K F + FQ G V +
Sbjct: 293 KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFV-HIIDFQISQGGQWVSL 351
Query: 191 IDLDIMQGLQWPGLFHILVSRSKKIRSM--RITGFGSSSERLADFAMSLGLPFDFNPLEG 248
I G + G ++ ++ RS R G +RL A G+PF+F+
Sbjct: 352 IRA---LGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGA-A 407
Query: 249 KIGNIIDVSQLGVRPGETIVVHW---MHHCLYD-ITGSDLGT--LRMLTLLRPKLITIVE 302
+++ +LGVR GE + V++ +HH + +T + LR++ L P ++T+VE
Sbjct: 408 LCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVE 467
Query: 303 QDLS-HGGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGP 361
Q+ + + FL RFVE +++Y A+F+++ L D ER VEQ E+ N++A G
Sbjct: 468 QEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGV 527
Query: 362 KRTGEVK-VERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWK 420
+R + + +W GF+P LS A LL + K YTL E +G L LGWK
Sbjct: 528 EREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEK-YTLEERDGALYLGWK 586
Query: 421 DLSLLTASAWQ 431
+ L+T+ AW+
Sbjct: 587 NQPLITSCAWR 597
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 300 (110.7 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 119/380 (31%), Positives = 180/380 (47%)
Query: 86 ECVAMDNLD--DATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSP---- 139
+C + + D +A+ L +I E S ERV YF AL R+ + T S
Sbjct: 223 DCARISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSPNSPATSSSSSST 282
Query: 140 ----LTTKSLT----------LSQSQKIFNALQSYNSICPLIKFSHFTANQ--AIFQALD 183
L+ K+L L+ +Q I A + N I ++ F Q A+ QAL
Sbjct: 283 EDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKI-HIVDFGIVQGIQWPALLQALA 341
Query: 184 GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDF 243
+ + G+ P L S + S+ TG RL DFA L L FDF
Sbjct: 342 TRTSGKPTQIRV-SGIPAPSL-----GESPE-PSLIATG-----NRLRDFAKVLDLNFDF 389
Query: 244 NPLEGKIGNIIDVSQLGVRPGETIVVHWMHHC--LYDITGSDLGT-LRMLTLLRPKLITI 300
P+ I ++++ S V P E + V++M L D T + + T LR+ L P+++T+
Sbjct: 390 IPILTPI-HLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTL 448
Query: 301 VEQDLS-HGGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVG 359
E ++S + F R AL +YSA+F++L LG DS ER VE++LFG I ++
Sbjct: 449 GEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLI--- 505
Query: 360 GPKRTG------EVKVERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKG-YTLVEEN 412
GP++TG E K E+W ++ GF V LS +QA +LL + + Y++VE
Sbjct: 506 GPEKTGIHRERMEEK-EQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESK 564
Query: 413 -GCLKLGWKDLSLLTASAWQ 431
G + L W DL LLT S+W+
Sbjct: 565 PGFISLAWNDLPLLTLSSWR 584
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 300 (110.7 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 106/370 (28%), Positives = 167/370 (45%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTK 143
CA ++ L++A ++ E+ ++ S +R+ AY L AR+ +S Y L K
Sbjct: 229 CARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCK 288
Query: 144 SLT----LSQSQKIFNA--------LQSYNSICPLIKFSHFTANQAIFQALDGADCVHII 191
L+ Q +F L + +I IK + F G + +I
Sbjct: 289 EPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEE-EVHIIDFDINQGNQYMTLI 347
Query: 192 -DLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKI 250
+ + G + P L + + ++ I G RL A G+ F F + K
Sbjct: 348 RSIAELPGKR-PRLRLTGIDDPESVQRS-IGGLRIIGLRLEQLAEDNGVSFKFKAMPSKT 405
Query: 251 GNIIDVSQLGVRPGETIVVHW---MHHC----LYDITGSDLGTLRMLTLLRPKLITIVEQ 303
+I+ S LG +PGET++V++ +HH + + D L M+ L PKL+T+VEQ
Sbjct: 406 -SIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRD-ELLHMVKSLNPKLVTVVEQ 463
Query: 304 DLSHGGS-FLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPK 362
D++ S F RF+EA YYSA+F++L L +S ER VE+Q +I NIVA G +
Sbjct: 464 DVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEE 523
Query: 363 RTGEVKVE-RWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKD 421
R + +W + GF P +S L+ Y L EE G L W++
Sbjct: 524 RIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEE 583
Query: 422 LSLLTASAWQ 431
SL+ ASAW+
Sbjct: 584 KSLIVASAWR 593
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 176 (67.0 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 60/221 (27%), Positives = 107/221 (48%)
Query: 229 RLADFAMSLGLPFDFNPLEGKIGNI--IDVSQLGVRPGETIVVHWMHHCLYDIT--GSDL 284
R+ FA +G+PF FN + +G++ D+++L V+P E + ++ + ++ I GS
Sbjct: 314 RMEKFARLMGVPFKFNIIH-HVGDLSEFDLNELDVKPDEVLAINCVG-AMHGIASRGSPR 371
Query: 285 -GTLRMLTLLRPKLITIVEQ--DL---SHGG---SFLGRFVEALHYYSALFDALGDGLGA 335
+ LRP+++T+VE+ DL GG FL F E L ++ F++ +
Sbjct: 372 DAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPR 431
Query: 336 DSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVER-WGEELKRVGFRPVSLSGNPAAQA 394
S ER +E+ G I ++VA T + R W ++ GF V S A
Sbjct: 432 TSNERLMLERAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDV 490
Query: 395 SLLLGMFPWKGYTLVE--ENGCLKLGWKDLSLLTASAWQPS 433
LL + +++V+ + + L W+D ++ ASAW+P+
Sbjct: 491 RALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRPT 531
Score = 163 (62.4 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 96 ATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTKSLT--LSQSQKI 153
A +L ++ELSSP+ + +++ +YF AL R+ S Y + T + T +
Sbjct: 162 AQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFEST 221
Query: 154 FNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSK 213
+ + + P F H AN AI +A+DG +HI+D+ QWP L L +RS
Sbjct: 222 RKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSD 281
Query: 214 KIRSMRIT 221
+R+T
Sbjct: 282 DTPHLRLT 289
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 278 (102.9 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 115/364 (31%), Positives = 170/364 (46%)
Query: 98 DLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSP------LTTKSLT----- 146
D L I E S +RVG YFA AL + S + S L+ K+L
Sbjct: 193 DTLIRIKESVSESGDPIQRVGYYFAEALSHKETESPSSSSSSSLEDFILSYKTLNDACPY 252
Query: 147 -----LSQSQKIFNALQSYNSICPLIKFSHFTANQ--AIFQALDGADCVHIIDLDIMQGL 199
L+ +Q I A N+I ++ F F Q A+ QAL + I G+
Sbjct: 253 SKFAHLTANQAILEATNQSNNI-HIVDFGIFQGIQWSALLQALATRSSGKPTRIRI-SGI 310
Query: 200 QWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQL 259
P L S+ TG RL DFA L L F+F P+ I +++ S
Sbjct: 311 PAPSL------GDSPGPSLIATG-----NRLRDFAAILDLNFEFYPVLTPI-QLLNGSSF 358
Query: 260 GVRPGETIVVHWMHHC--LYDITGSDLGT-LRMLTLLRPKLITIVEQDLS-HGGSFLGRF 315
V P E +VV++M L D T + +GT LR+ L P+++T+ E ++S + F R
Sbjct: 359 RVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRV 418
Query: 316 VEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPK-----RTGEVKV- 369
+L +YSA+F++L L DS ER VE+ LFG I ++V R G ++
Sbjct: 419 KNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEK 478
Query: 370 ERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKG-YTLVE-ENGCLKLGWKDLSLLTA 427
E+W +++ GF PV S +QA LLL + + Y+LVE E G + L W ++ LLT
Sbjct: 479 EQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTV 538
Query: 428 SAWQ 431
S+W+
Sbjct: 539 SSWR 542
Score = 39 (18.8 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 92 NLDDATDLLPEISELS-SPFVSSPERVGA 119
N DA+ P+ PFVS P R+ A
Sbjct: 97 NGGDASQTNPDFPIYGHDPFVSFPSRLSA 125
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 263 (97.6 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 97/365 (26%), Positives = 159/365 (43%)
Query: 86 ECVAMDNLDDATDLLPEISE-LSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTKS 144
+CV D L A +L +++ L SP +R YF AL + + S +P+ S
Sbjct: 131 DCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGS---NRNPIRLSS 187
Query: 145 LTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADC---VHIIDLDIMQGLQW 201
+ Q+I A++ Y+ I P+ FSHFTANQAI +L VH++D +I G Q+
Sbjct: 188 WS-EIVQRI-RAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQY 245
Query: 202 PGLFHILVSRSKKIRSMRITGFGSSS---------ERLADFAMSLGLPFDFNPLEGKIGN 252
L + +S +R+T + E L FA + + F + K
Sbjct: 246 ASLMREITEKSVSGGFLRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFE 305
Query: 253 IIDVSQLGVRPGETIVVHWMHHCLYDITG-SDLGTLRMLTLLRPKLITIVEQD----LSH 307
++ + GE VV ++G +D + L + PK++ V+ + ++
Sbjct: 306 MLSFKAIRFVEGERTVVLISPAIFRRLSGITDF--VNNLRRVSPKVVVFVDSEGWTEIAG 363
Query: 308 GGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKR-TGE 366
GSF FV AL +Y+ + ++L + + VE + +I V +R TGE
Sbjct: 364 SGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHTGE 423
Query: 367 VKVERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLT 426
+ W E G RP+ LS QA LL +G+ + + G L L W +L+
Sbjct: 424 MT---WREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVA 480
Query: 427 ASAWQ 431
SAW+
Sbjct: 481 TSAWR 485
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 263 (97.6 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 68/218 (31%), Positives = 109/218 (50%)
Query: 222 GFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETIVVHW---MHHCLYD 278
G RLA A +PF+FN + + + LGVRPGE + V++ +HH +
Sbjct: 275 GLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEV-KPKNLGVRPGEALAVNFAFVLHHMPDE 333
Query: 279 ITGSDLGT---LRMLTLLRPKLITIVEQDLS-HGGSFLGRFVEALHYYSALFDALGDGLG 334
++ LRM+ L PK++T+VEQ+ + + +F RF+E ++YY+A+F+++ L
Sbjct: 334 SVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLP 393
Query: 335 ADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV-ERWGEELKRVGFRPVSLSGNPAAQ 393
D +R VEQ ++ NI+A G R ++ +W GF P LS +
Sbjct: 394 RDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNST 453
Query: 394 ASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 431
LL + K Y L E +G L LGW L+ + AW+
Sbjct: 454 IKSLLRNYSDK-YRLEERDGALYLGWMHRDLVASCAWK 490
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 63/227 (27%), Positives = 106/227 (46%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTK 143
CA+ ++ ++L A ++ ++ ++ S +R+GAY L A++ SS Y L
Sbjct: 126 CAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNR- 184
Query: 144 SLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPG 203
S ++ + + +CP KF + +AN AI +A+ + VHIID I QG QW
Sbjct: 185 -CPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVT 243
Query: 204 LFHILVSRSKKIRSMRITGF----------GSSS---ERLADFAMSLGLPFDFNPLEGKI 250
L +R +RITG G S RLA A +PF+FN + +
Sbjct: 244 LIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSV 303
Query: 251 GNIIDVSQLGVRPGETIVVHW---MHHCLYDITGSDLGTLRMLTLLR 294
+ LGVRPGE + V++ +HH + ++ R+L +++
Sbjct: 304 SEV-KPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVK 349
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 253 (94.1 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 67/201 (33%), Positives = 105/201 (52%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTK 143
CA+ V++D+ A ++L +I E SSP + ER+ YFA++L+AR+ + Y+ L++K
Sbjct: 400 CAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSK 459
Query: 144 SLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPG 203
+ + K A Q+Y S+CP K + AN ++ + A+ +HIID I G QWP
Sbjct: 460 KTSAADMLK---AYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPA 516
Query: 204 LFHIL-VSRSKKIRSMRITGF-----G--------SSSERLADFAMSLGLPFDFNPLEGK 249
L H L +SR +RITG G + RLA + +PF++N + K
Sbjct: 517 LIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQK 576
Query: 250 IGNIIDVSQLGVRPGETIVVH 270
I V L +R GE +VV+
Sbjct: 577 -WETIQVEDLKLRQGEYVVVN 596
Score = 191 (72.3 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 65/221 (29%), Positives = 101/221 (45%)
Query: 222 GFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETIVVHWMHHC--LYDI 279
G + RLA + +PF++N + K I V L +R GE +VV+ + L D
Sbjct: 549 GVQETGHRLARYCQRHNVPFEYNAIAQK-WETIQVEDLKLRQGEYVVVNSLFRFRNLLDE 607
Query: 280 T---GSDL-GTLRMLTLLRPKL-ITIVEQDLSHGGSFLGRFVEALHYYSALFDALGDGLG 334
T S L+++ + P + I + + F+ RF EAL +YSA+FD L
Sbjct: 608 TVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLA 667
Query: 335 ADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV-ERWGEELKRVGFRPVSLSGNPAAQ 393
+ R E++ +G EI N+VA G +R + ++W L R GFR + L
Sbjct: 668 REDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQN 727
Query: 394 ASLLLGMFPWKGYTLVEENG-CLKLGWKDLSLLTASAWQPS 433
L + K + V++NG L GWK + +S W PS
Sbjct: 728 LKLKIENGYDKNFD-VDQNGNWLLQGWKGRIVYASSLWVPS 767
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 245 (91.3 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 101/363 (27%), Positives = 167/363 (46%)
Query: 83 QCAECVAMDNLDDATDLLPEISE-LSSPFVSSP-ERVGAYFAHALQARVVSSCLGTYSPL 140
+ AE + D A +L +++ LSSP V P ER YF AL ++ + T +P
Sbjct: 211 KAAEVIESDTCL-AQGILARLNQQLSSP-VGKPLERAAFYFKEALN-NLLHNVSQTLNPY 267
Query: 141 TTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQ 200
SL KI A +S++ I P+++F++FT+NQA+ ++ G +HIID DI G Q
Sbjct: 268 ---SLIF----KIA-AYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQ 319
Query: 201 WPGLFHILVSRSKKIR-SMRITGFGSSSERLADFAMSLGLPFD-FNPLEGKIGNIIDVSQ 258
W L LV R S++IT F S + D + LG D +I +D+
Sbjct: 320 WASLMQELVLRDNAAPLSLKITVFASPANH--D-QLELGFTQDNLKHFASEINISLDIQV 376
Query: 259 LGVRPGETIVVHWMHHC-----LYDITGSDLG----TLRMLTLLRPKLITIVEQDLSHGG 309
L + +I W + +I+ + LR + L P +I ++
Sbjct: 377 LSLDLLGSI--SWPNSSEKEAVAVNISAASFSHLPLVLRFVKHLSPTIIVCSDRGCERTD 434
Query: 310 -SFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVK 368
F + +LH ++ALF++L D + A+ +E+ L EI +V R E
Sbjct: 435 LPFSQQLAHSLHSHTALFESL-DAVNANLDAMQKIERFLIQPEIEKLVL--DRSRPIERP 491
Query: 369 VERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTAS 428
+ W ++GF PV+ S +QA L+ P +G+ + +++ L L W+ L+ S
Sbjct: 492 MMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVS 551
Query: 429 AWQ 431
AW+
Sbjct: 552 AWR 554
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 232 (86.7 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 72/240 (30%), Positives = 117/240 (48%)
Query: 202 PGLFHILVSRSKKIRSMR--ITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQL 259
P H+ ++ + + + + + RL FA S+G PF + + N S L
Sbjct: 242 PSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDT-NAFSTSSL 300
Query: 260 GVRPGETIVVHWMHHC---LYDITGSDLGTLRMLTLLRPKLITIVEQDLSHGGS--FLGR 314
+ GE +V++ M H + S + L L PKL+T+V +++ G+ FL R
Sbjct: 301 KLVRGEAVVINCMLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYR 360
Query: 315 FVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRN-IVAVGGPKRTGEVK-VERW 372
F++ LH +SA+FD+L GL + R VE+ G + N + + EV+ W
Sbjct: 361 FMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVANWLTRITA--NDAEVESFASW 418
Query: 373 GEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVE--ENGCLKLGWKDLSLLTASAW 430
+ L+ GF+P+ +S QA LLL +F G+ + E +NG L LGWK L++AS W
Sbjct: 419 PQWLETNGFKPLEVSFTNRCQAKLLLSLFN-DGFRVEELGQNG-LVLGWKSRRLVSASFW 476
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 54/192 (28%), Positives = 89/192 (46%)
Query: 99 LLPEISELSSPFV-SSPERVGAYFAHALQARVVSSCLGTYSPLTTKSLTLSQSQKIFNAL 157
+L + +L SP ++ ER+ A+F + L + + P + Q+ + +A
Sbjct: 128 ILARLKDLVSPGDRTNMERLAAHFTNGLSKLLERDSV--LCPQQHRDDVYDQAD-VISAF 184
Query: 158 QSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSK--KI 215
+ ++ P + F + TA QAI +A+ +HI+D DI +G+QW L LVSR+
Sbjct: 185 ELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSA 244
Query: 216 RSMRITGF-----GSSS--------ERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVR 262
+ +RIT G S RL FA S+G PF + + N S L +
Sbjct: 245 QHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDT-NAFSTSSLKLV 303
Query: 263 PGETIVVHWMHH 274
GE +V++ M H
Sbjct: 304 RGEAVVINCMLH 315
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 231 (86.4 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 94/367 (25%), Positives = 152/367 (41%)
Query: 86 ECVAMDNLDDATDLLPEISELSSPFVSSP-ERVGAYFAHALQARVVSSCLGTYSPLTTKS 144
+C+ D L A +L ++++ P +R YF AL G+ T ++
Sbjct: 108 DCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEAL---------GSLLTGTNRN 158
Query: 145 LTLSQS---QKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADC---VHIIDLDIMQG 198
S S QKI A++ ++ I P+ FSHFTANQAI +L VH++D +I G
Sbjct: 159 QLFSWSDIVQKI-RAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFG 217
Query: 199 LQWPGLFHILVSRSKKIRSMRITGFGSSS---------ERLADFAMSLGLPFDFNPLEGK 249
Q+ L + +S +R+T + E L FA + + F + K
Sbjct: 218 GQYASLMREIAEKSANGGFLRVTAVVAEDCAVETRLVKENLTQFAAEMKIRFQIEFVLMK 277
Query: 250 IGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQD----L 305
I+ + GE VV + G + L + P ++ V+ +
Sbjct: 278 TFEILSFKAIRFVDGERTVVLISPAIFRRVIGI-AEFVNNLGRVSPNVVVFVDSEGCTET 336
Query: 306 SHGGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRT- 364
+ GSF FV A +Y+ + ++L + + VE L +I V +R+
Sbjct: 337 AGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAAVETAANRRSA 396
Query: 365 GEVKVERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSL 424
G++ W E L G RPV LS QA LL +G+ + + G L L W +L
Sbjct: 397 GQMT---WREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRAL 453
Query: 425 LTASAWQ 431
+ SAW+
Sbjct: 454 VATSAWR 460
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 230 (86.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 94/341 (27%), Positives = 150/341 (43%)
Query: 116 RVGAYFAHALQARVVSSCLGTYSPLTTKSLTLSQSQKI-FNALQSYNSICPLIKFSHFTA 174
R +Y AL + + S L SP SL+ Q+ A ++++ P ++F +FTA
Sbjct: 294 RAASYITEALHSLLQDSSL---SP---PSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTA 347
Query: 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILV---SRSKKIRSMRITGFGSSS---- 227
NQ I ++ +G D +HI+D DI G QW L L +RS S++IT F S S
Sbjct: 348 NQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSD 407
Query: 228 --------ERLADFAMSLGLPFDFNPLEGKI---GNIIDVSQLGVRPGETIVVHWMHHCL 276
E L FA G+ F+ L +I +S E I V+ +
Sbjct: 408 EFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSM 467
Query: 277 YDITGSDLGTLRMLTLLRPKLITIVEQ--DLSHGGSFLGRFVEALHYYSALFDALGDGLG 334
++G LR L + P ++ ++ D ++ F + AL YY++L ++L G
Sbjct: 468 --VSGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSG-N 524
Query: 335 ADSIERHT-VEQQLFGCEIRNIVAVGGPKRTGEVKVERWGEELKRVGFRPVSLSGNPAAQ 393
++ E T +E+ I+ ++ R E + W + GF PV+LS Q
Sbjct: 525 LNNAEAATSIERFCVQPSIQKLLT--NRYRWME-RSPPWRSLFGQCGFTPVTLSQTAETQ 581
Query: 394 ASLLLGMFPWKGYTLVEENGC---LKLGWKDLSLLTASAWQ 431
A LL P +G+ L + L L W+ L+T SAW+
Sbjct: 582 AEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 225 (84.3 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 66/210 (31%), Positives = 97/210 (46%)
Query: 83 QCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTT 142
QCA+ VA + ATD L EI SS +R+ YFA AL+AR+ G SP +
Sbjct: 230 QCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARIT----GNISPPVS 285
Query: 143 KSLTLSQSQK--IFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQ 200
S + I A + + CP+ +F AN++I++ A +HI+D ++ G Q
Sbjct: 286 NPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQ 345
Query: 201 WPGLFHILVSRSKKIRSMRITGF-----G--------SSSERLADFAMSLGLPFDFNPLE 247
WP L L R +R+TG G + RL F +PF+FN +
Sbjct: 346 WPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIA 405
Query: 248 GKIGNIIDVSQLGVRPGETIVVHWMHHCLY 277
K I + +L + PGET VV+ +H Y
Sbjct: 406 KK-WETITLDELMINPGETTVVNCIHRLQY 434
Score = 201 (75.8 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 59/219 (26%), Positives = 104/219 (47%)
Query: 226 SSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETIVVHWMHHCLY--DITGS- 282
+ RL F +PF+FN + K I + +L + PGET VV+ +H Y D T S
Sbjct: 384 TGRRLKRFCDQFNVPFEFNFIAKK-WETITLDELMINPGETTVVNCIHRLQYTPDETVSL 442
Query: 283 DLGTLRMLTLLR---PKLITIVE-QDLSHGGSFLGRFVEALHYYSALFDALGDGLGADSI 338
D +L L R P L E + + F+ RF EAL +YS+LFD + A+
Sbjct: 443 DSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDE 502
Query: 339 --ERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV-ERWGEELKRVGFRPVSLSGNPAAQAS 395
R +E++L + ++++ G +R + ++W + R GF+P ++S +A
Sbjct: 503 YKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAK 562
Query: 396 LLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 434
++ + + + +N + GWK + S W+P++
Sbjct: 563 EIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPAE 601
Score = 40 (19.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 87 CVAMDNLDDATDLLPEISEL---SSPFVSSP 114
C +NL+ +L P+ E SSP S P
Sbjct: 22 CKPRNNLESGNNLFPDFHESQNQSSPNDSPP 52
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 221 (82.9 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGT-----YS 138
CA+ V+ + A DLL +I + SP + +R+ +FA+AL+AR+ S GT Y
Sbjct: 322 CAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGST-GTMIQSYYD 380
Query: 139 PLTTKSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQG 198
+++K T +Q K ++ + S P + +F +N+ I A A +HI+D I+ G
Sbjct: 381 SISSKKRTAAQILKSYSV---FLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYG 437
Query: 199 LQWPGLFHILVSRSKKIRSMRITGF-----G--------SSSERLADFAMSLGLPFDFNP 245
QWP L + +R +RITG G + RL ++ G+PF++N
Sbjct: 438 FQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNA 497
Query: 246 LEGKIGNIIDVSQLGVRPGETIVVH 270
+ K I + + +RP E + V+
Sbjct: 498 IASKNWETIKMEEFKIRPNEVLAVN 522
Score = 200 (75.5 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 62/221 (28%), Positives = 101/221 (45%)
Query: 226 SSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETIVVHWMHHC--LYD-ITGS 282
+ RL ++ G+PF++N + K I + + +RP E + V+ + L D I G
Sbjct: 478 TGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGE 537
Query: 283 DL----GTLRMLTLLRPKLITIVEQDLSHGGSFLG-RFVEALHYYSALFDALGDGLGADS 337
+ G L+++ + P + + S F RF EAL +YSALFD G L ++
Sbjct: 538 EDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKEN 597
Query: 338 IERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV-ERWGEELKRVGFRPVSLSGNPAAQASL 396
ER E + +G E+ N++A G R + ++W + R GF+ + A L
Sbjct: 598 PERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVE---AELVQL 654
Query: 397 LLG-MFPW---KGYTLVEENGCLKLGWKDLSLLTASAWQPS 433
M W K + L E++ GWK L ++S W PS
Sbjct: 655 FREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVPS 695
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 217 (81.4 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 98/373 (26%), Positives = 159/373 (42%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGT-YSPLTT 142
CA + N L +SEL+S + R+ A+ ALQ + SS + + + P+ T
Sbjct: 152 CALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFT 211
Query: 143 KSLTLSQSQKIFN-ALQSYNSICPLIKFSHFTANQAIFQAL--DGADC--VHIIDLDIMQ 197
+ S K+F L + + P + AN AI Q L D D +HIID+ +
Sbjct: 212 FA---SAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGVSH 268
Query: 198 GLQWPGLFHILVSRSK-KIRSMRITGFGSSSERLADFAMSLGLP-FDF-NPLEG-----K 249
G+QWP L L R + +RIT S+ AD S+G P +++ + L G K
Sbjct: 269 GMQWPTLLEALSCRLEGPPPRVRITVI---SDLTADIPFSVGPPGYNYGSQLLGFARSLK 325
Query: 250 IG---NIIDVSQL-GVRPGETIVV---HWMHHCLYDITGSDLGTLRMLTLLRPKLITIVE 302
I +++D QL P E ++V +HH + I TL+ + LRPK + + E
Sbjct: 326 INLQISVLDKLQLIDTSPHENLIVCAQFRLHHLKHSINDERGETLKAVRSLRPKGVVLCE 385
Query: 303 Q--DLSHGGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGG 360
+ S F F + L Y D+ G ++ E E++L E ++ G
Sbjct: 386 NNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSE----ERKLMEGEATKVLMNAG 441
Query: 361 PKRTGEVKVERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLG-- 418
G+ E+W E ++ GF + + A LL + + + E+G G
Sbjct: 442 DMNEGK---EKWYERMREAGFFVEAFEEDAVDGAKSLLRKYD-NNWEIRMEDGDTFAGLM 497
Query: 419 WKDLSLLTASAWQ 431
WK ++ S W+
Sbjct: 498 WKGEAVSFCSLWK 510
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 212 (79.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 94/371 (25%), Positives = 161/371 (43%)
Query: 83 QCAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTT 142
QCA+ VA + A + L EI E SS + +R+G +FA AL+AR+ + S ++
Sbjct: 215 QCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTPISATSS 274
Query: 143 KSLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQA--LDGADCVHIIDLD---IMQ 197
++ + + +Q+ ++ ++ T N+ +A L D + ++Q
Sbjct: 275 RTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQ 334
Query: 198 GLQ----WPGLFHIL---VSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKI 250
L P L + + +S S R+ G RL F +PF+++ +
Sbjct: 335 ALSKRDIGPPLLRVTGIELPQSGFRPSERVEETG---RRLKRFCDKFNVPFEYSFIAKNW 391
Query: 251 GNIIDVSQLGVRPGETIVVHWMHHCLY--DIT---GSDLGT-LRMLTLLRPKLITIVEQD 304
NI + L + GET VV+ + Y D T S T L++ + P L E +
Sbjct: 392 ENIT-LDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEIN 450
Query: 305 LSHGGSF-LGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKR 363
++ F L RF EAL + S+LFD L D R VE++L + +++A G +R
Sbjct: 451 GTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSER 510
Query: 364 TGEVKV-ERWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDL 422
+ ++W + R GFRP LS ++ K + + +N + GWK
Sbjct: 511 FARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGR 570
Query: 423 SLLTASAWQPS 433
L S W+P+
Sbjct: 571 VLYAVSCWKPA 581
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 132 (51.5 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 56/221 (25%), Positives = 99/221 (44%)
Query: 229 RLADFAMSLGLPFDFN--PLEGKIGNIIDVSQLGVRPG---ETIVV--HWMHHCLYD--I 279
+L +FA + + +F P G + QL + P E +VV H M + + +
Sbjct: 194 KLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPL 253
Query: 280 TGSD--LGT--LRMLTLLRPKLITIVEQDLS-HGGSFLGRFVEALHYYSALFDALGDGLG 334
T S L T L+ L L P+++T++E+D+ + + R A +Y+ FD +
Sbjct: 254 TSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM- 312
Query: 335 ADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVER-WGEELKRVGFRPVSLSGNPAAQ 393
S +R E ++ +I N+VA G +R + +R W E ++ F V + + A
Sbjct: 313 --SEQRRWYEAEI-SWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVAD 369
Query: 394 ASLLLGMFP--WKGYTLVEENGCLKLGWKDLSLLTASAWQP 432
+L W G +++ L L WK S++ A+ W P
Sbjct: 370 VKAMLEEHAVGW-GMKKEDDDESLVLTWKGHSVVFATVWVP 409
Score = 122 (48.0 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 43/157 (27%), Positives = 77/157 (49%)
Query: 84 CAECVAMDNLDDAT--DLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLT 141
CA A+D+ D A +L ++ ++ P S +R+ + F AL +R VS +P
Sbjct: 34 CA--TAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSK-----TPTL 86
Query: 142 TKSLT-LSQSQKI--FNALQ--SYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIM 196
+ +++ L Q+ ++ F+ ++ ++ + P +F AN AI A++G VHI+DL +
Sbjct: 87 SSTISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLT 146
Query: 197 QGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADF 233
+Q P L + SR K + SSS+ F
Sbjct: 147 HCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPF 183
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 62/205 (30%), Positives = 98/205 (47%)
Query: 84 CAECVAMDNLDDATDLLPEISELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTTK 143
CA+ VA D+ A LL +I S+PF +R+ FA+ L+AR+ + Y + +K
Sbjct: 351 CAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYKGIVSK 410
Query: 144 SLTLSQSQKIFNALQSYNSICPLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPG 203
+ + + A Q + + CP K S+F N+ I + + VH+ID I+ G QWP
Sbjct: 411 PRSAAA---VLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPT 467
Query: 204 LFH-ILVSRSKKIRSMRIT----GFG------SSSERLADFAMSLGLPFDFNPLEGKIGN 252
L H + S K+R I GF + +RLA +A G+PF++ + K +
Sbjct: 468 LIHRFSMYGSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKK-WD 526
Query: 253 IIDVSQLGVRPGETIVVHWMHHCLY 277
I + L + E VV+ CLY
Sbjct: 527 AIQLEDLDIDRDEITVVN----CLY 547
Score = 173 (66.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 54/217 (24%), Positives = 103/217 (47%)
Query: 226 SSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETIVVHWMHHC--LYD----I 279
+ +RLA +A G+PF++ + K + I + L + E VV+ ++ L+D +
Sbjct: 501 TGQRLAAYAKLFGVPFEYKAIAKK-WDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKV 559
Query: 280 TGSDLGTLRMLTLLRPKLITI-VEQDLSHGGSFLGRFVEALHYYSALFDALGDGLGADSI 338
L ++ + P L + + F+ RF EAL ++S++FD L + +
Sbjct: 560 ESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDE 619
Query: 339 ERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV-ERWGEELKRVGFRPVSLSGNPAAQASLL 397
ER +E ++FG E N++A G +R + ++W R G V + +P+ + L
Sbjct: 620 ERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGL--VQVPFDPSIMKTSL 677
Query: 398 --LGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQP 432
+ F K + + ++N L GWK +++ S W+P
Sbjct: 678 HKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 200 (75.5 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 91/356 (25%), Positives = 159/356 (44%)
Query: 104 SELSSPFVSSPERVGAYFAHALQARVVSSCLGTYSPLTT-KSLTLSQSQKIFNALQSYNS 162
S SPF +R ++ A AL + + + + PL T ++L L + A +S++
Sbjct: 308 SNHKSPF----QRAASHIAEALLSLIHNE---SSPPLITPENLILRIA-----AYRSFSE 355
Query: 163 ICPLIKFSHFTANQAIFQALD--GADCVHIIDLDIMQGLQWPGLFHILVS-----RSKKI 215
P ++F +FTANQ+I ++ + G D +HIID D+ G QW L L S R +
Sbjct: 356 TSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRA 415
Query: 216 RSMRITGFGS-------------SSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQ--LG 260
S+++T F + E L FA + +PF+ L ++ +++ + L
Sbjct: 416 SSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVEL--LLNPAYWPLS 473
Query: 261 VRPGETIVVHWMHHCLYDITGSDLGT-LRMLTLLRPKLITIVEQDLSHGGS-FLGRFVEA 318
+R E + ++ + + L LR L L P ++ ++ + F + +
Sbjct: 474 LRSSEKEAIA-VNLPVNSVASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHS 532
Query: 319 LHYYSALFDALGDGLGAD--SIERHTVEQQLFGCEIRNIVAVGGPKRTGEV-KVERWGEE 375
L Y+++L ++L D SIER V+ I ++ KR + + W
Sbjct: 533 LQYHTSLLESLDANQNQDDSSIERFWVQPS-----IEKLLM----KRHRWIERSPPWRIL 583
Query: 376 LKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 431
+ GF P SLS AQA LL P +G+ + + L + W+ L+T SAW+
Sbjct: 584 FTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWK 639
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 195 (73.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 64/223 (28%), Positives = 111/223 (49%)
Query: 219 RITGFGSSSERLADFAMSLGLPFDFNPLEG-KIGNIIDVSQLGVRPGETIVVHWMHHCLY 277
R+ G +L D LG+ FN + ++G++ + LG P ET+ V+ + LY
Sbjct: 425 RLKAVGDLLSQLGD---RLGISVSFNVVTSLRLGDL-NRESLGCDPDETLAVN-LAFKLY 479
Query: 278 DITGSDLGT-------LRMLTLLRPKLITIVEQDL-SHGGSFLGRFVEALHYYSALFDAL 329
+ + T LR + L+P+++T+VEQ++ S+ FLGR E+ Y AL +++
Sbjct: 480 RVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESV 539
Query: 330 GDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKV-ERWGEELKRVGFRPVSLSG 388
+ + + +R VE+ + G ++ N VA G R +V +W + GF + LS
Sbjct: 540 ESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLS- 597
Query: 389 NPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ 431
A++ G G+T+ E+NG + GW +L ASAW+
Sbjct: 598 EKIAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 95 (38.5 bits), Expect = 0.00051, P = 0.00051
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 371 RWGEELKRVGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAW 430
+W GF LS + L+ + + YTLVE++G + LGWK +L++ASAW
Sbjct: 12 KWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYS-EHYTLVEKDGAMLLGWKKRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 434 397 0.00097 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 621 (66 KB)
Total size of DFA: 244 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.70u 0.09s 27.79t Elapsed: 00:00:03
Total cpu time: 27.71u 0.09s 27.80t Elapsed: 00:00:03
Start: Mon May 20 21:37:53 2013 End: Mon May 20 21:37:56 2013