Query 013903
Match_columns 434
No_of_seqs 155 out of 691
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:16:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.1 0.0045 1.6E-07 59.2 12.4 103 187-304 71-180 (261)
2 3dh0_A SAM dependent methyltra 95.6 0.28 9.6E-06 43.9 14.2 107 176-301 27-141 (219)
3 3dtn_A Putative methyltransfer 94.3 0.16 5.5E-06 46.1 8.9 109 176-301 33-146 (234)
4 2r3s_A Uncharacterized protein 94.1 0.61 2.1E-05 44.8 13.2 113 176-307 153-276 (335)
5 4a6d_A Hydroxyindole O-methylt 94.1 0.24 8.3E-06 49.0 10.5 156 174-386 167-331 (353)
6 3dp7_A SAM-dependent methyltra 93.9 0.39 1.3E-05 47.5 11.5 116 177-307 170-292 (363)
7 3bkx_A SAM-dependent methyltra 93.8 2.2 7.6E-05 39.4 16.0 117 177-309 34-166 (275)
8 3dlc_A Putative S-adenosyl-L-m 93.7 0.37 1.3E-05 42.6 10.0 107 174-302 32-147 (219)
9 3ujc_A Phosphoethanolamine N-m 93.3 1 3.5E-05 41.1 12.7 118 165-301 34-157 (266)
10 1x19_A CRTF-related protein; m 93.2 1.7 5.9E-05 42.4 14.8 114 174-305 178-298 (359)
11 3r0q_C Probable protein argini 92.6 0.45 1.5E-05 47.6 9.7 144 176-334 53-208 (376)
12 1vl5_A Unknown conserved prote 92.2 1.9 6.4E-05 39.7 12.8 103 177-301 28-138 (260)
13 2ip2_A Probable phenazine-spec 91.7 1.6 5.3E-05 42.1 12.1 112 175-305 157-275 (334)
14 3mgg_A Methyltransferase; NYSG 91.7 2.3 7.8E-05 39.4 12.9 97 186-301 37-140 (276)
15 3p9c_A Caffeic acid O-methyltr 91.5 0.77 2.6E-05 45.5 9.9 109 176-305 190-301 (364)
16 3u81_A Catechol O-methyltransf 91.4 0.73 2.5E-05 41.8 8.9 107 187-305 59-172 (221)
17 3reo_A (ISO)eugenol O-methyltr 91.0 0.98 3.3E-05 44.8 10.0 110 176-306 192-304 (368)
18 3gwz_A MMCR; methyltransferase 90.8 1.8 6.3E-05 42.7 11.8 113 176-306 192-311 (369)
19 3lcv_B Sisomicin-gentamicin re 90.5 1.4 4.7E-05 42.9 10.1 131 177-329 125-258 (281)
20 1qzz_A RDMB, aclacinomycin-10- 90.3 1.7 5.8E-05 42.5 11.0 109 176-303 172-288 (374)
21 3mcz_A O-methyltransferase; ad 90.2 2.1 7.3E-05 41.4 11.6 116 177-306 169-291 (352)
22 3jwg_A HEN1, methyltransferase 90.2 0.84 2.9E-05 40.9 8.0 116 177-308 20-146 (219)
23 2aot_A HMT, histamine N-methyl 90.2 1.6 5.6E-05 41.2 10.4 109 185-301 51-170 (292)
24 3kkz_A Uncharacterized protein 89.8 2.7 9.2E-05 38.9 11.5 122 158-301 17-148 (267)
25 3hem_A Cyclopropane-fatty-acyl 89.7 3.1 0.00011 39.3 12.0 108 176-301 62-181 (302)
26 3jwh_A HEN1; methyltransferase 89.3 1.4 4.8E-05 39.4 8.8 103 186-304 29-142 (217)
27 1kpg_A CFA synthase;, cyclopro 89.1 2.9 9.8E-05 39.1 11.1 107 177-301 55-166 (287)
28 3hnr_A Probable methyltransfer 89.1 1.8 6.3E-05 38.5 9.4 107 176-301 35-143 (220)
29 3i53_A O-methyltransferase; CO 88.8 1.4 4.8E-05 42.6 8.9 109 177-303 160-275 (332)
30 3m70_A Tellurite resistance pr 88.5 1.5 5E-05 41.1 8.6 108 176-301 110-221 (286)
31 3f4k_A Putative methyltransfer 88.2 6 0.0002 35.9 12.5 120 160-301 19-148 (257)
32 3frh_A 16S rRNA methylase; met 87.5 1.5 5E-05 42.2 7.9 98 187-303 106-206 (253)
33 1xxl_A YCGJ protein; structura 87.1 10 0.00034 34.4 13.3 105 175-301 10-122 (239)
34 1nkv_A Hypothetical protein YJ 87.1 8 0.00027 35.0 12.6 106 174-301 24-138 (256)
35 2xvm_A Tellurite resistance pr 87.0 5.3 0.00018 34.5 10.9 106 175-300 21-133 (199)
36 3q7e_A Protein arginine N-meth 86.8 1.5 5E-05 43.3 7.8 102 187-303 67-173 (349)
37 1tw3_A COMT, carminomycin 4-O- 86.5 4.5 0.00015 39.3 11.1 111 176-304 173-290 (360)
38 3p9n_A Possible methyltransfer 86.5 3 0.0001 36.5 9.0 106 188-308 46-158 (189)
39 3ofk_A Nodulation protein S; N 86.2 6.3 0.00022 34.8 11.1 107 177-301 42-152 (216)
40 3ccf_A Cyclopropane-fatty-acyl 85.5 7 0.00024 36.3 11.5 104 176-302 47-153 (279)
41 4htf_A S-adenosylmethionine-de 84.7 3.6 0.00012 38.4 9.0 107 178-302 61-172 (285)
42 2y1w_A Histone-arginine methyl 84.5 2.7 9.1E-05 41.3 8.4 114 175-302 39-154 (348)
43 3bus_A REBM, methyltransferase 84.2 8.2 0.00028 35.4 11.2 105 176-301 51-164 (273)
44 1ve3_A Hypothetical protein PH 84.1 7.1 0.00024 34.5 10.4 98 187-301 39-140 (227)
45 3htx_A HEN1; HEN1, small RNA m 84.1 3.7 0.00013 46.0 9.9 117 178-308 713-840 (950)
46 2qe6_A Uncharacterized protein 84.0 8.4 0.00029 36.4 11.4 106 188-304 79-198 (274)
47 3hm2_A Precorrin-6Y C5,15-meth 83.9 12 0.0004 31.7 11.4 106 176-301 15-125 (178)
48 1wzn_A SAM-dependent methyltra 83.5 7.5 0.00026 35.2 10.5 108 178-303 33-145 (252)
49 3lst_A CALO1 methyltransferase 83.0 1.9 6.4E-05 42.1 6.5 112 175-304 173-288 (348)
50 2o57_A Putative sarcosine dime 82.9 13 0.00045 34.6 12.2 110 176-306 68-191 (297)
51 2p35_A Trans-aconitate 2-methy 82.8 7.8 0.00027 35.1 10.3 107 177-302 24-131 (259)
52 3lcc_A Putative methyl chlorid 82.1 7.7 0.00026 34.9 9.9 95 188-301 68-169 (235)
53 2yxd_A Probable cobalt-precorr 82.0 9 0.00031 32.4 9.8 100 177-301 26-129 (183)
54 1dus_A MJ0882; hypothetical pr 81.8 8.5 0.00029 32.8 9.7 111 174-303 40-157 (194)
55 3bkw_A MLL3908 protein, S-aden 81.8 11 0.00039 33.6 10.9 107 174-301 31-142 (243)
56 2fk8_A Methoxy mycolic acid sy 81.4 13 0.00046 35.1 11.8 106 176-301 80-192 (318)
57 2yqz_A Hypothetical protein TT 81.4 13 0.00045 33.6 11.3 96 186-302 39-140 (263)
58 3g5l_A Putative S-adenosylmeth 81.2 18 0.00062 32.7 12.2 108 174-302 32-144 (253)
59 1yzh_A TRNA (guanine-N(7)-)-me 80.6 10 0.00035 33.7 10.1 107 187-304 42-157 (214)
60 1g6q_1 HnRNP arginine N-methyl 79.6 4.8 0.00017 39.1 8.1 102 187-301 39-143 (328)
61 1fp1_D Isoliquiritigenin 2'-O- 79.0 6.7 0.00023 38.5 9.0 107 176-303 198-307 (372)
62 1wy7_A Hypothetical protein PH 78.6 20 0.00067 31.3 11.2 89 187-294 50-141 (207)
63 3e8s_A Putative SAM dependent 78.6 12 0.0004 32.8 9.7 109 173-302 39-151 (227)
64 2kw5_A SLR1183 protein; struct 78.4 23 0.00078 30.7 11.5 95 189-302 32-130 (202)
65 1zg3_A Isoflavanone 4'-O-methy 77.9 14 0.00047 35.9 10.8 108 177-305 182-296 (358)
66 1y8c_A S-adenosylmethionine-de 77.8 4.7 0.00016 36.1 6.9 99 186-302 37-141 (246)
67 3mq2_A 16S rRNA methyltransfer 77.6 6.4 0.00022 35.0 7.7 110 178-302 19-139 (218)
68 3sm3_A SAM-dependent methyltra 77.1 6.7 0.00023 34.7 7.7 97 187-301 31-139 (235)
69 3d2l_A SAM-dependent methyltra 77.0 13 0.00043 33.2 9.6 105 177-302 26-136 (243)
70 3b3j_A Histone-arginine methyl 77.0 2.3 8E-05 44.0 5.1 112 176-303 148-263 (480)
71 3cc8_A Putative methyltransfer 76.8 17 0.00059 31.8 10.3 103 175-301 22-128 (230)
72 3fzg_A 16S rRNA methylase; met 76.7 4.9 0.00017 37.2 6.6 98 189-303 52-152 (200)
73 3iv6_A Putative Zn-dependent a 75.5 11 0.00037 35.9 9.0 53 176-237 35-87 (261)
74 3bgv_A MRNA CAP guanine-N7 met 73.6 8.8 0.0003 36.4 7.9 107 186-301 34-153 (313)
75 4hc4_A Protein arginine N-meth 73.4 6.2 0.00021 39.7 7.1 98 189-300 86-186 (376)
76 3g5t_A Trans-aconitate 3-methy 72.9 17 0.00057 34.1 9.7 102 185-301 35-147 (299)
77 2fyt_A Protein arginine N-meth 72.9 13 0.00044 36.3 9.1 112 176-300 54-168 (340)
78 1jsx_A Glucose-inhibited divis 72.8 8.7 0.0003 33.6 7.2 93 188-302 67-164 (207)
79 3giw_A Protein of unknown func 71.5 20 0.00067 34.7 9.8 140 156-303 44-201 (277)
80 3pfg_A N-methyltransferase; N, 71.2 8 0.00027 35.4 6.8 96 187-302 51-150 (263)
81 1nv8_A HEMK protein; class I a 71.1 15 0.00052 34.9 8.9 106 188-306 125-252 (284)
82 2ift_A Putative methylase HI07 70.9 11 0.00037 33.5 7.4 103 188-307 55-167 (201)
83 2p7i_A Hypothetical protein; p 70.8 21 0.00071 31.6 9.4 93 188-301 44-139 (250)
84 1ri5_A MRNA capping enzyme; me 70.7 13 0.00045 34.3 8.2 101 187-302 65-173 (298)
85 3eey_A Putative rRNA methylase 70.6 22 0.00074 30.8 9.2 103 188-301 24-137 (197)
86 3vc1_A Geranyl diphosphate 2-C 70.2 18 0.00062 34.2 9.3 104 176-301 106-219 (312)
87 3njr_A Precorrin-6Y methylase; 70.2 33 0.0011 30.4 10.5 103 176-302 45-153 (204)
88 3h2b_A SAM-dependent methyltra 70.1 18 0.00061 31.5 8.6 95 187-302 42-140 (203)
89 4e2x_A TCAB9; kijanose, tetron 70.0 6.7 0.00023 38.9 6.4 106 177-302 98-207 (416)
90 4dcm_A Ribosomal RNA large sub 69.9 20 0.00069 35.6 9.9 116 173-302 209-333 (375)
91 3lpm_A Putative methyltransfer 69.3 23 0.00078 32.6 9.6 107 186-302 49-175 (259)
92 2p8j_A S-adenosylmethionine-de 68.3 15 0.00053 31.9 7.8 96 188-302 25-127 (209)
93 3gu3_A Methyltransferase; alph 67.7 59 0.002 30.1 12.2 103 185-304 21-128 (284)
94 3g2m_A PCZA361.24; SAM-depende 67.6 17 0.00059 34.0 8.4 108 174-302 71-189 (299)
95 1xtp_A LMAJ004091AAA; SGPP, st 67.5 29 0.00099 31.1 9.7 108 176-302 83-196 (254)
96 1ws6_A Methyltransferase; stru 67.2 5.6 0.00019 33.5 4.4 100 188-306 43-150 (171)
97 3ocj_A Putative exported prote 67.2 6.2 0.00021 37.4 5.2 100 187-301 119-225 (305)
98 3uwp_A Histone-lysine N-methyl 66.8 21 0.00071 36.8 9.3 114 175-301 162-286 (438)
99 3ege_A Putative methyltransfer 66.6 11 0.00039 34.6 6.8 111 176-309 24-137 (261)
100 3dli_A Methyltransferase; PSI- 66.6 9.1 0.00031 34.6 6.0 95 187-301 42-138 (240)
101 3e05_A Precorrin-6Y C5,15-meth 66.1 33 0.0011 29.9 9.6 107 176-302 30-141 (204)
102 1fp2_A Isoflavone O-methyltran 65.7 16 0.00055 35.3 8.0 99 186-305 188-291 (352)
103 4fsd_A Arsenic methyltransfera 65.4 28 0.00097 34.2 9.9 104 186-301 83-201 (383)
104 4hg2_A Methyltransferase type 64.9 16 0.00056 34.2 7.6 101 189-313 42-146 (257)
105 3ggd_A SAM-dependent methyltra 64.8 6.8 0.00023 35.4 4.8 104 187-303 57-164 (245)
106 2vdw_A Vaccinia virus capping 62.5 30 0.001 33.1 9.1 102 187-301 49-167 (302)
107 3e23_A Uncharacterized protein 62.5 25 0.00085 30.8 8.0 95 187-302 44-140 (211)
108 2jjq_A Uncharacterized RNA met 62.4 59 0.002 32.8 11.8 92 188-302 292-386 (425)
109 3lbf_A Protein-L-isoaspartate 62.2 32 0.0011 30.0 8.7 103 176-302 67-173 (210)
110 3l8d_A Methyltransferase; stru 61.9 44 0.0015 29.6 9.7 94 187-302 54-152 (242)
111 3ou2_A SAM-dependent methyltra 61.1 35 0.0012 29.6 8.7 106 175-301 34-144 (218)
112 3g89_A Ribosomal RNA small sub 60.9 13 0.00046 34.4 6.2 98 186-301 80-182 (249)
113 2fpo_A Methylase YHHF; structu 60.7 14 0.00047 32.8 6.0 99 188-304 56-161 (202)
114 3p2e_A 16S rRNA methylase; met 59.4 34 0.0012 31.1 8.6 102 186-301 24-137 (225)
115 3grz_A L11 mtase, ribosomal pr 59.3 21 0.00073 31.1 6.9 64 173-244 45-114 (205)
116 1zx0_A Guanidinoacetate N-meth 59.1 18 0.00061 32.6 6.6 101 186-301 60-168 (236)
117 2ex4_A Adrenal gland protein A 59.0 56 0.0019 29.2 10.0 97 186-301 79-183 (241)
118 2pjd_A Ribosomal RNA small sub 58.5 9.6 0.00033 37.0 4.9 114 174-302 184-302 (343)
119 1uwv_A 23S rRNA (uracil-5-)-me 58.1 58 0.002 32.7 10.8 105 179-301 279-387 (433)
120 3dxy_A TRNA (guanine-N(7)-)-me 58.1 22 0.00074 32.2 6.9 107 186-304 34-151 (218)
121 3m33_A Uncharacterized protein 57.4 39 0.0013 30.1 8.6 47 188-244 50-96 (226)
122 1xdz_A Methyltransferase GIDB; 57.2 35 0.0012 30.8 8.3 97 187-302 71-173 (240)
123 2fhp_A Methylase, putative; al 56.9 30 0.001 29.3 7.4 104 187-307 45-158 (187)
124 3tfw_A Putative O-methyltransf 56.6 18 0.00063 33.1 6.3 100 187-303 64-170 (248)
125 3gjy_A Spermidine synthase; AP 56.4 60 0.002 31.7 10.2 105 185-303 88-200 (317)
126 2gb4_A Thiopurine S-methyltran 55.9 54 0.0018 30.4 9.4 45 186-239 68-112 (252)
127 1dl5_A Protein-L-isoaspartate 53.8 62 0.0021 30.7 9.8 108 174-302 63-174 (317)
128 3fut_A Dimethyladenosine trans 53.2 33 0.0011 32.6 7.6 61 160-230 16-81 (271)
129 1zq9_A Probable dimethyladenos 53.1 48 0.0016 31.3 8.7 44 176-228 18-61 (285)
130 2h1r_A Dimethyladenosine trans 52.5 50 0.0017 31.4 8.8 56 175-239 31-89 (299)
131 1pjz_A Thiopurine S-methyltran 52.2 67 0.0023 28.2 9.1 44 186-238 22-65 (203)
132 2i62_A Nicotinamide N-methyltr 51.7 31 0.0011 31.0 6.9 40 183-230 53-92 (265)
133 3i9f_A Putative type 11 methyl 51.6 67 0.0023 26.7 8.7 98 178-301 9-110 (170)
134 1ne2_A Hypothetical protein TA 50.9 38 0.0013 29.4 7.1 93 187-300 52-144 (200)
135 3thr_A Glycine N-methyltransfe 50.8 25 0.00086 32.5 6.3 46 176-230 47-92 (293)
136 2g72_A Phenylethanolamine N-me 50.6 29 0.00099 32.2 6.7 38 186-231 71-108 (289)
137 2fca_A TRNA (guanine-N(7)-)-me 50.2 73 0.0025 28.3 9.1 105 186-303 38-153 (213)
138 4dzr_A Protein-(glutamine-N5) 49.8 13 0.00043 32.3 3.8 44 178-228 21-65 (215)
139 1l3i_A Precorrin-6Y methyltran 48.4 51 0.0018 27.6 7.4 59 177-244 24-87 (192)
140 2avn_A Ubiquinone/menaquinone 48.0 1.1E+02 0.0038 27.6 10.2 94 186-302 54-151 (260)
141 2gpy_A O-methyltransferase; st 47.6 67 0.0023 28.5 8.5 98 188-302 56-159 (233)
142 3dmg_A Probable ribosomal RNA 47.2 1.2E+02 0.0042 29.9 11.0 115 174-303 215-340 (381)
143 2esr_A Methyltransferase; stru 46.3 61 0.0021 27.3 7.6 102 188-307 33-142 (177)
144 2yxe_A Protein-L-isoaspartate 44.8 45 0.0016 29.1 6.7 62 177-244 68-133 (215)
145 3mti_A RRNA methylase; SAM-dep 44.7 64 0.0022 27.3 7.5 101 188-302 24-134 (185)
146 3ghf_A Septum site-determining 43.6 25 0.00087 29.5 4.5 49 188-241 49-99 (120)
147 3mb5_A SAM-dependent methyltra 43.3 1.1E+02 0.0036 27.5 9.2 105 176-301 83-192 (255)
148 2gs9_A Hypothetical protein TT 43.1 1.2E+02 0.0042 26.0 9.3 98 178-301 29-130 (211)
149 3id6_C Fibrillarin-like rRNA/T 42.1 1.5E+02 0.0053 27.2 10.2 56 176-237 63-124 (232)
150 2nxc_A L11 mtase, ribosomal pr 42.0 47 0.0016 30.6 6.6 92 187-301 121-216 (254)
151 3dr5_A Putative O-methyltransf 41.7 59 0.002 29.3 7.1 107 180-303 50-163 (221)
152 3ftd_A Dimethyladenosine trans 41.0 54 0.0018 30.5 6.8 53 176-237 21-73 (249)
153 3fpf_A Mtnas, putative unchara 40.0 1.5E+02 0.0051 28.7 10.0 95 186-302 122-221 (298)
154 3g07_A 7SK snRNA methylphospha 38.3 57 0.0019 30.6 6.6 44 178-228 36-81 (292)
155 2b3t_A Protein methyltransfera 38.2 50 0.0017 30.5 6.2 52 186-244 109-164 (276)
156 3tqs_A Ribosomal RNA small sub 37.8 95 0.0032 29.0 8.0 44 176-228 19-62 (255)
157 3ntv_A MW1564 protein; rossman 37.7 47 0.0016 29.9 5.7 100 186-303 71-176 (232)
158 3bzb_A Uncharacterized protein 37.2 1.7E+02 0.0058 27.1 9.8 33 188-228 81-114 (281)
159 2h00_A Methyltransferase 10 do 37.2 54 0.0019 29.6 6.1 53 186-245 65-122 (254)
160 2ozv_A Hypothetical protein AT 36.8 1.1E+02 0.0038 28.1 8.3 37 185-228 35-71 (260)
161 2ipx_A RRNA 2'-O-methyltransfe 36.6 1.1E+02 0.0037 27.2 8.0 98 187-302 78-181 (233)
162 2qn6_B Translation initiation 36.6 33 0.0011 27.7 4.0 32 213-244 49-91 (93)
163 1o54_A SAM-dependent O-methylt 35.6 1.7E+02 0.0057 26.8 9.3 58 176-239 102-162 (277)
164 3tr6_A O-methyltransferase; ce 35.1 35 0.0012 30.1 4.4 99 188-303 66-174 (225)
165 3bwc_A Spermidine synthase; SA 34.4 1.2E+02 0.004 28.8 8.2 104 187-303 96-210 (304)
166 2pxx_A Uncharacterized protein 34.2 1.4E+02 0.0047 25.5 8.1 39 186-232 42-80 (215)
167 1qam_A ERMC' methyltransferase 32.9 71 0.0024 29.3 6.2 48 176-232 20-67 (244)
168 3adn_A Spermidine synthase; am 32.2 2.1E+02 0.0073 27.0 9.6 126 187-330 84-223 (294)
169 3gdh_A Trimethylguanosine synt 30.6 94 0.0032 27.6 6.5 51 186-245 78-133 (241)
170 1o9g_A RRNA methyltransferase; 30.0 83 0.0028 28.4 6.1 46 178-228 43-88 (250)
171 1yb2_A Hypothetical protein TA 29.7 84 0.0029 28.9 6.2 62 177-244 101-167 (275)
172 1xj5_A Spermidine synthase 1; 28.9 1.5E+02 0.0052 28.7 8.1 110 187-308 121-240 (334)
173 1i1n_A Protein-L-isoaspartate 28.2 1.2E+02 0.0043 26.4 6.8 46 177-228 66-113 (226)
174 3bxo_A N,N-dimethyltransferase 28.1 2.3E+02 0.008 24.5 8.7 96 186-302 40-140 (239)
175 3uzu_A Ribosomal RNA small sub 27.7 1.6E+02 0.0055 27.8 7.8 48 176-228 32-79 (279)
176 3orh_A Guanidinoacetate N-meth 27.7 76 0.0026 28.7 5.3 102 186-300 60-167 (236)
177 3q87_B N6 adenine specific DNA 27.1 54 0.0019 27.9 4.0 34 189-232 26-59 (170)
178 1fbn_A MJ fibrillarin homologu 26.9 1.8E+02 0.0063 25.6 7.8 38 186-230 74-111 (230)
179 1mjf_A Spermidine synthase; sp 26.4 1.5E+02 0.005 27.7 7.3 33 188-228 77-109 (281)
180 4e7p_A Response regulator; DNA 26.4 1.9E+02 0.0065 23.1 7.2 79 215-301 18-99 (150)
181 1vlm_A SAM-dependent methyltra 26.1 2.5E+02 0.0085 24.4 8.5 86 187-301 48-137 (219)
182 2yxl_A PH0851 protein, 450AA l 25.8 3.5E+02 0.012 27.0 10.4 64 174-243 247-314 (450)
183 1ixk_A Methyltransferase; open 25.0 1.4E+02 0.0048 28.4 7.0 61 174-240 106-169 (315)
184 3duw_A OMT, O-methyltransferas 24.9 71 0.0024 28.0 4.5 100 187-303 59-167 (223)
185 1nt2_A Fibrillarin-like PRE-rR 24.6 1.1E+02 0.0036 27.3 5.6 44 187-237 58-104 (210)
186 3tm4_A TRNA (guanine N2-)-meth 24.5 2.5E+02 0.0086 27.3 8.9 104 185-301 216-329 (373)
187 1vbf_A 231AA long hypothetical 23.9 1.2E+02 0.0039 26.7 5.7 43 177-228 61-103 (231)
188 1sui_A Caffeoyl-COA O-methyltr 23.8 1.5E+02 0.005 27.1 6.6 99 188-303 81-190 (247)
189 3opn_A Putative hemolysin; str 23.3 1.3E+02 0.0046 27.3 6.2 59 164-231 15-74 (232)
190 2o07_A Spermidine synthase; st 23.2 2.3E+02 0.0078 26.9 8.1 128 187-328 96-232 (304)
191 2pt6_A Spermidine synthase; tr 23.2 2.5E+02 0.0086 26.8 8.4 104 187-304 117-231 (321)
192 3a27_A TYW2, uncharacterized p 23.0 4.4E+02 0.015 24.1 10.8 91 189-301 122-217 (272)
193 3c3y_A Pfomt, O-methyltransfer 22.0 2.2E+02 0.0077 25.4 7.4 99 188-303 72-181 (237)
194 2i7c_A Spermidine synthase; tr 21.9 2.9E+02 0.01 25.6 8.5 103 187-304 79-193 (283)
195 2pbf_A Protein-L-isoaspartate 21.9 1.7E+02 0.0058 25.6 6.4 50 177-228 69-120 (227)
196 2zfu_A Nucleomethylin, cerebra 21.8 1E+02 0.0035 26.7 4.9 89 177-301 57-149 (215)
197 2ksn_A Ubiquitin domain-contai 20.9 1E+02 0.0035 26.7 4.3 38 75-113 56-93 (137)
198 4a69_A Histone deacetylase 3,; 20.4 54 0.0019 33.0 3.0 26 177-202 153-180 (376)
199 2yvl_A TRMI protein, hypotheti 20.2 4.3E+02 0.015 23.0 10.1 55 176-239 81-138 (248)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.09 E-value=0.0045 Score=59.25 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=61.2
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH---HHHHHcCC--ceEEeeeccCccccccccccCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA---DFAMSLGL--PFDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~---~fA~slgv--pFeF~~V~~~~e~l~~~~~L~~ 261 (434)
.-+|+|+|.|.|. +...|+.+- ++|..+||||+.+.+.|. +.++..|. +.+|. ..++.++ ..
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~--~~D~~~~------~~ 137 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVI--EGDIRDI------AI 137 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEE--ESCTTTC------CC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEe--ecccccc------cc
Confidence 3479999999985 445565543 346789999999987443 33444454 44443 3333333 33
Q ss_pred CCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEE-EecC
Q 013903 262 RPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITI-VEQD 304 (434)
Q Consensus 262 ~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~-vE~e 304 (434)
.+-.+++.|+.+|.+.. ..+..+|+.| +.|+|.-.++ .|.-
T Consensus 138 ~~~d~v~~~~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 138 ENASMVVLNFTLQFLEP--SERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CSEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cccccceeeeeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 34456666755443321 2345677765 7799987554 4543
No 2
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.57 E-value=0.28 Score=43.91 Aligned_cols=107 Identities=14% Similarity=0.213 Sum_probs=62.6
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCcc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIG 251 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e 251 (434)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+.+.+ ...+.++..|++ ++|.. .++.
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--~d~~ 98 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLK--SEEN 98 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE--CBTT
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe--cccc
Confidence 566776665556689999999987444444333 34569999998876 444455556765 44443 2233
Q ss_pred ccccccccCCCCC--ceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 252 NIIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 252 ~l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
++ ...++ ++++.+. ++| + .....+|+. .+.|+|.-.+++
T Consensus 99 ~~------~~~~~~fD~v~~~~~l~~-~----~~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 99 KI------PLPDNTVDFIFMAFTFHE-L----SEPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp BC------SSCSSCEEEEEEESCGGG-C----SSHHHHHHHHHHHEEEEEEEEE
T ss_pred cC------CCCCCCeeEEEeehhhhh-c----CCHHHHHHHHHHHhCCCeEEEE
Confidence 32 12222 4555553 333 2 234566655 477899866554
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.27 E-value=0.16 Score=46.13 Aligned_cols=109 Identities=17% Similarity=0.150 Sum_probs=59.8
Q ss_pred HHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCC--ceEEeeeccCccc
Q 013903 176 QAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGL--PFDFNPLEGKIGN 252 (434)
Q Consensus 176 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgv--pFeF~~V~~~~e~ 252 (434)
+.+++.+. ..+.-+|+|+|.|.|.- ...|+.+. |..++|||+.+.+.+....+.+.- ..+|. ..+..+
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~d~~~ 103 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMSEKMLEIAKNRFRGNLKVKYI--EADYSK 103 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESCHHHHHHHHHHTCSCTTEEEE--ESCTTT
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECCHHHHHHHHHhhccCCCEEEE--eCchhc
Confidence 56667665 44568999999999853 34444432 457999999988744433333321 34443 333333
Q ss_pred cccccccCCCCCceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPGETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+ .. . ..=++++.+. ++| +.+ .....+|+.+ +.|+|.-.+++
T Consensus 104 ~-~~---~-~~fD~v~~~~~l~~-~~~--~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 104 Y-DF---E-EKYDMVVSALSIHH-LED--EDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp C-CC---C-SCEEEEEEESCGGG-SCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred c-CC---C-CCceEEEEeCcccc-CCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 3 11 1 1224555543 344 211 1123566655 67899866654
No 4
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.14 E-value=0.61 Score=44.79 Aligned_cols=113 Identities=14% Similarity=0.154 Sum_probs=63.8
Q ss_pred HHHHhhcCC--CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeecc
Q 013903 176 QAIFQALDG--ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEG 248 (434)
Q Consensus 176 qAILEA~~g--~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~ 248 (434)
..|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|+++.+ . ...+..+..|++ .+|...
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~-- 222 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAG-- 222 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEES--
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEec--
Confidence 467777765 667899999999995 444555443 45699999988 5 223333445654 555542
Q ss_pred CccccccccccCCCC-CceEEEe-cccccccccCCChHHHHHHH-HhcCCCE-EEEEecCCCC
Q 013903 249 KIGNIIDVSQLGVRP-GETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKL-ITIVEQDLSH 307 (434)
Q Consensus 249 ~~e~l~~~~~L~~~~-~EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~v-vv~vE~ea~~ 307 (434)
++.+. .+.. -++++.+ .+|| ..+ .....+|+.+ +.|+|.- ++++|...+.
T Consensus 223 d~~~~------~~~~~~D~v~~~~~l~~-~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 223 SAFEV------DYGNDYDLVLLPNFLHH-FDV--ATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp CTTTS------CCCSCEEEEEEESCGGG-SCH--HHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred ccccC------CCCCCCcEEEEcchhcc-CCH--HHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 22221 1112 2445443 3333 211 1234666655 6689987 5566665443
No 5
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.12 E-value=0.24 Score=48.99 Aligned_cols=156 Identities=21% Similarity=0.263 Sum_probs=86.3
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHc----C-CceEEeeecc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSL----G-LPFDFNPLEG 248 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~sl----g-vpFeF~~V~~ 248 (434)
..+.|++++.-...-+|+|+|-+.|. +..+|+++. |.+|+|.++.+. ..+.|+.. + =..+|.+ .
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~--v~~~a~~~~~~~~~~rv~~~~--g 235 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPE--VVWTAKQHFSFQEEEQIDFQE--G 235 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHH--HHHHHHHHSCC--CCSEEEEE--S
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHH--HHHHHHHhhhhcccCceeeec--C
Confidence 35678888765555689999999995 555666553 578999888643 22333321 1 1244443 2
Q ss_pred CccccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCE-EEEEecCCCCC--CChhHHHHHHHHHHHH
Q 013903 249 KIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKL-ITIVEQDLSHG--GSFLGRFVEALHYYSA 324 (434)
Q Consensus 249 ~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~v-vv~vE~ea~~n--~~F~~RF~eaL~yYsa 324 (434)
+ +.+. .....+++....++|...+ .....+|+.+ +.|+|.- ++++|.-.+.+ +|....
T Consensus 236 D---~~~~---~~~~~D~~~~~~vlh~~~d--~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~---------- 297 (353)
T 4a6d_A 236 D---FFKD---PLPEADLYILARVLHDWAD--GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQ---------- 297 (353)
T ss_dssp C---TTTS---CCCCCSEEEEESSGGGSCH--HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHH----------
T ss_pred c---cccC---CCCCceEEEeeeecccCCH--HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHH----------
Confidence 1 1110 1223456655544332222 1234567665 6799975 55667544432 243221
Q ss_pred HHHHhhccCCCCChHHHHHHHHHhhhhhhhHHhhCCCCcccccccccHHHHHhcCCCeeccC
Q 013903 325 LFDALGDGLGADSIERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGEELKRVGFRPVSL 386 (434)
Q Consensus 325 lFDsLea~l~~~~~eR~~vE~~~lg~eI~niVAcEG~~R~ER~e~~~W~~rm~~AGF~~v~l 386 (434)
+|| |.-.+.+.|.+|. .++|+..++.|||+.+.+
T Consensus 298 ~~d------------------------l~ml~~~~g~ert----~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 298 LYS------------------------LNMLVQTEGQERT----PTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp HHH------------------------HHHHHSSSCCCCC----HHHHHHHHHHHTCEEEEE
T ss_pred HHH------------------------HHHHHhCCCcCCC----HHHHHHHHHHCCCceEEE
Confidence 121 1112334566664 457999999999998765
No 6
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.89 E-value=0.39 Score=47.46 Aligned_cols=116 Identities=9% Similarity=0.052 Sum_probs=61.6
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEeeeccCcc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFNPLEGKIG 251 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~~V~~~~e 251 (434)
.+++.+.....-+|+|+|.|.|. +...|+.+. |.+++|+++. .+ ...+.++..|+ ..+|..- ++.
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d~~ 239 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGA--NLL 239 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEEC--CCC
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEc--ccc
Confidence 34444433455799999999986 344454442 4579999997 44 33334444565 3555532 222
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecCCCC
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQDLSH 307 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ea~~ 307 (434)
+. + ..+. ..-++++.+.++|.+.+ .....+|+.+ +.|+|.-.+ ++|.-.+.
T Consensus 240 ~~-~-~~~p-~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 240 DR-D-VPFP-TGFDAVWMSQFLDCFSE--EEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SS-S-CCCC-CCCSEEEEESCSTTSCH--HHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred cc-C-CCCC-CCcCEEEEechhhhCCH--HHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 11 0 0011 23356666554442322 1234677666 668997655 55644433
No 7
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=93.77 E-value=2.2 Score=39.38 Aligned_cols=117 Identities=13% Similarity=0.095 Sum_probs=63.2
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---------HHHHHHHHcCC--ceEEee
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---------RLADFAMSLGL--PFDFNP 245 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---------rL~~fA~slgv--pFeF~~ 245 (434)
.|++.+.-.+.-+|+|+|.|.|.- ...|+.+- .|..++|||+.+.+ ...+.++..|+ ..+|..
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 456665544556899999988853 33344332 13468999998653 33333444454 355543
Q ss_pred eccCccccccccccCC--CCCceEEEec-ccccccccCCChHHHHHHHHhcCC--CEEEEEecCCCCCC
Q 013903 246 LEGKIGNIIDVSQLGV--RPGETIVVHW-MHHCLYDITGSDLGTLRMLTLLRP--KLITIVEQDLSHGG 309 (434)
Q Consensus 246 V~~~~e~l~~~~~L~~--~~~EaLaVN~-~~h~l~~~~~~~~~~L~~ir~L~P--~vvv~vE~ea~~n~ 309 (434)
.. ++ ....+.. ..=++++.+. ++| + +. ...+++.++.|.| ..+++.+.....+.
T Consensus 108 ~d----~~-~~~~~~~~~~~fD~v~~~~~l~~-~---~~-~~~~~~~~~~l~~~gG~l~~~~~~~~~~~ 166 (275)
T 3bkx_A 108 NT----NL-SDDLGPIADQHFDRVVLAHSLWY-F---AS-ANALALLFKNMAAVCDHVDVAEWSMQPTA 166 (275)
T ss_dssp SC----CT-TTCCGGGTTCCCSEEEEESCGGG-S---SC-HHHHHHHHHHHTTTCSEEEEEEECSSCSS
T ss_pred CC----hh-hhccCCCCCCCEEEEEEccchhh-C---CC-HHHHHHHHHHHhCCCCEEEEEEecCCCCc
Confidence 21 11 0111111 2224565554 333 2 22 3458899998887 46666676655443
No 8
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.69 E-value=0.37 Score=42.61 Aligned_cols=107 Identities=16% Similarity=0.148 Sum_probs=64.6
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeecc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEG 248 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~ 248 (434)
..+.|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+.+.+ ...+.++..|+. .+|.. .
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~ 100 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQ--G 100 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--C
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEE--c
Confidence 34566666665555 99999999986 45555555 3589999998876 444555566664 55543 2
Q ss_pred CccccccccccCCCCC--ceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 249 KIGNIIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 249 ~~e~l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
++.++ ...++ ++++.+. ++|. .....+|+. .+.|+|.-.+++.
T Consensus 101 d~~~~------~~~~~~~D~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 101 DVHNI------PIEDNYADLIVSRGSVFFW-----EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp BTTBC------SSCTTCEEEEEEESCGGGC-----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHC------CCCcccccEEEECchHhhc-----cCHHHHHHHHHHhCCCCCEEEEE
Confidence 23332 12222 4555553 4442 335566655 4678998776653
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=93.34 E-value=1 Score=41.15 Aligned_cols=118 Identities=10% Similarity=0.068 Sum_probs=65.1
Q ss_pred CCccchhHhHhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcC--CceE
Q 013903 165 PLIKFSHFTANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLG--LPFD 242 (434)
Q Consensus 165 P~~kfa~~tANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slg--vpFe 242 (434)
.++.-........+++.+.-...-+|+|+|.|.|.- ...|+.+.+ .++|||+.+.+.+....+... -..+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~----~~~l~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~ 105 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGG----CMYINEKYG----AHTHGIDICSNIVNMANERVSGNNKII 105 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEESCHHHHHHHHHTCCSCTTEE
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHHcC----CEEEEEeCCHHHHHHHHHHhhcCCCeE
Confidence 445555555567778877666677999999998853 334444322 489999988865544433332 2334
Q ss_pred EeeeccCccccccccccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 243 FNPLEGKIGNIIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 243 F~~V~~~~e~l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
|.. .++.++ ...++ ++++.+ .++|+ . ......+|+.+ +-|+|.-.+++
T Consensus 106 ~~~--~d~~~~------~~~~~~fD~v~~~~~l~~~-~--~~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 106 FEA--NDILTK------EFPENNFDLIYSRDAILAL-S--LENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp EEE--CCTTTC------CCCTTCEEEEEEESCGGGS-C--HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEE--CccccC------CCCCCcEEEEeHHHHHHhc-C--hHHHHHHHHHHHHHcCCCCEEEE
Confidence 432 222222 12122 344444 34442 1 12345666554 67899755544
No 10
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.17 E-value=1.7 Score=42.42 Aligned_cols=114 Identities=10% Similarity=-0.014 Sum_probs=65.5
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeecc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEG 248 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~ 248 (434)
..+.|++.+.-.+.-+|+|+|.|.|.- ...|+.+. |.+++|+++. .+ ...+.++..|++ .+|.. .
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~--~ 247 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDI----SAAMLKHF---PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIA--V 247 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHH----HHHHHHHC---TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEE--C
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHH----HHHHHHHC---CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEe--C
Confidence 346788888756677999999999974 34444432 4679999998 54 333334445653 55543 2
Q ss_pred CccccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecCC
Q 013903 249 KIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQDL 305 (434)
Q Consensus 249 ~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ea 305 (434)
++.+. .+..+++++.+..+|.+.+ .....+|+.+ +.|+|.-.+ ++|...
T Consensus 248 d~~~~------~~~~~D~v~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 248 DIYKE------SYPEADAVLFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp CTTTS------CCCCCSEEEEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred ccccC------CCCCCCEEEEechhccCCH--HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 22222 1223466666544332211 1245667655 667997555 566543
No 11
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=92.59 E-value=0.45 Score=47.55 Aligned_cols=144 Identities=14% Similarity=0.170 Sum_probs=82.2
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGN 252 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~ 252 (434)
++|++...-.+.-.|+|+|.|.|. +...++.+ |. -++|||+.+ + ...+.++..|++=....+..++++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~----ls~~la~~--g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGI----LAIWSAQA--GA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVED 123 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTH----HHHHHHHT--TC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHhccccCCCCEEEEeccCcCH----HHHHHHhc--CC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhh
Confidence 445444444455689999999983 44455555 21 389999988 5 555566667776223333444444
Q ss_pred cccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEecCCCCCC----C-hh---HHHHHHHHHHH
Q 013903 253 IIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQDLSHGG----S-FL---GRFVEALHYYS 323 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ea~~n~----~-F~---~RF~eaL~yYs 323 (434)
+ .. . ..=++|+.|++.|.+.. ......+|+.+ +-|+|.-+++...-.-+.. + +. ..|.+.+..+.
T Consensus 124 ~-~~---~-~~~D~Iv~~~~~~~l~~-e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 197 (376)
T 3r0q_C 124 I-SL---P-EKVDVIISEWMGYFLLR-ESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMADWH 197 (376)
T ss_dssp C-CC---S-SCEEEEEECCCBTTBTT-TCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHHHHHHHHHHHH
T ss_pred c-Cc---C-CcceEEEEcChhhcccc-hHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhhhhhhhhhhhh
Confidence 4 11 1 22356666777665432 34567888887 8899998887643322211 2 22 13445555555
Q ss_pred HHHHHhhccCC
Q 013903 324 ALFDALGDGLG 334 (434)
Q Consensus 324 alFDsLea~l~ 334 (434)
.+++..+...+
T Consensus 198 ~fw~~~~~~~G 208 (376)
T 3r0q_C 198 NFSDEIKSYYG 208 (376)
T ss_dssp HHHHHHHHSTT
T ss_pred hhhhccCcccc
Confidence 56554444433
No 12
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=92.19 E-value=1.9 Score=39.70 Aligned_cols=103 Identities=11% Similarity=0.162 Sum_probs=59.2
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHHcCCc-eEEeeeccCccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMSLGLP-FDFNPLEGKIGN 252 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~slgvp-FeF~~V~~~~e~ 252 (434)
.|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+.+.| .+.++..|++ .+|.. .+.++
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~--~d~~~ 96 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQ--GDAEQ 96 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--CCC-C
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEE--ecHHh
Confidence 34555544455689999999886 555666653 2 999999987733 3444555654 44442 22333
Q ss_pred cccccccCCCCC--ceEEEe-cccccccccCCChHHHHH-HHHhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLR-MLTLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~v 301 (434)
+ ...++ +.|+.+ .++| +. +...+|+ ..+-|+|.-.+++
T Consensus 97 l------~~~~~~fD~V~~~~~l~~-~~----d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 97 M------PFTDERFHIVTCRIAAHH-FP----NPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp C------CSCTTCEEEEEEESCGGG-CS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred C------CCCCCCEEEEEEhhhhHh-cC----CHHHHHHHHHHHcCCCCEEEE
Confidence 2 22222 455555 3444 22 2455665 4577899866654
No 13
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=91.71 E-value=1.6 Score=42.10 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=59.0
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEeeeccC
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFNPLEGK 249 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~~V~~~ 249 (434)
...|++.+.-.. .+|+|+|.+.|. +...|+.+. |.+++|+++. .+ ...+..+..|+ .++|..- +
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d 225 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGG--D 225 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEES--C
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecC--C
Confidence 356777765344 899999999995 444455442 3569999998 44 22222222333 3555432 2
Q ss_pred ccccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecCC
Q 013903 250 IGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQDL 305 (434)
Q Consensus 250 ~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ea 305 (434)
+.+ .+. ..-++++.+.++|...+ .....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 226 ~~~-----~~~-~~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 226 MLQ-----EVP-SNGDIYLLSRIIGDLDE--AASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp TTT-----CCC-SSCSEEEEESCGGGCCH--HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCC-----CCC-CCCCEEEEchhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 211 111 12345555544332211 1224667655 678997654 455443
No 14
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=91.67 E-value=2.3 Score=39.41 Aligned_cols=97 Identities=20% Similarity=0.225 Sum_probs=54.6
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~ 261 (434)
+.-+|+|+|.+.|. +...|+.+. |..++|||+.+.. ...+.+...|++ .+|.. .++.++ ..
T Consensus 37 ~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--~d~~~~------~~ 101 (276)
T 3mgg_A 37 PGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPESLEKARENTEKNGIKNVKFLQ--ANIFSL------PF 101 (276)
T ss_dssp TTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--CCGGGC------CS
T ss_pred CCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--cccccC------CC
Confidence 45689999999984 344555442 3459999999876 444445556664 44432 222232 12
Q ss_pred CCC--ceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 262 RPG--ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 262 ~~~--EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.++ +.|+.+.+++.+. ....+|+.+ +-|+|.-++++
T Consensus 102 ~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHLQ----SPEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp CTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCeeEEEEechhhhcC----CHHHHHHHHHHHcCCCcEEEE
Confidence 222 4555554322222 245666655 67899866554
No 15
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=91.51 E-value=0.77 Score=45.53 Aligned_cols=109 Identities=14% Similarity=0.156 Sum_probs=58.8
Q ss_pred HHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccc
Q 013903 176 QAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 176 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
..|++.+. -...-+|+|+|.+.|.- ...|+.+. |.+++|+++. .+ ..+.|+.. -..+|.. .++.+
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~-~~~~a~~~-~~v~~~~--~D~~~-- 255 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGAT----VAAIAAHY---PTIKGVNFDL-PH-VISEAPQF-PGVTHVG--GDMFK-- 255 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC-HH-HHTTCCCC-TTEEEEE--CCTTT--
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHH----HHHHHHHC---CCCeEEEecC-HH-HHHhhhhc-CCeEEEe--CCcCC--
Confidence 45777776 34567999999999964 34444432 4678999987 32 22333332 1344433 22111
Q ss_pred cccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecCC
Q 013903 255 DVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQDL 305 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ea 305 (434)
.+ ..+++++...++|.+.+ .....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 256 ---~~--p~~D~v~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 256 ---EV--PSGDTILMKWILHDWSD--QHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp ---CC--CCCSEEEEESCGGGSCH--HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ---CC--CCCCEEEehHHhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 11 12366665544332222 2235677766 668997644 555443
No 16
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=91.45 E-value=0.73 Score=41.76 Aligned_cols=107 Identities=12% Similarity=0.113 Sum_probs=58.3
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCcccccc--cccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIID--VSQL 259 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~--~~~L 259 (434)
.-+|+|+|.+.|.-=. .|+..- ++.-+||+|+.+.+ ...+.++..|+. ++|.. .+..+... ....
T Consensus 59 ~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 59 PSLVLELGAYCGYSAV----RMARLL--QPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILN--GASQDLIPQLKKKY 130 (221)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHGGGTTTTS
T ss_pred CCEEEEECCCCCHHHH----HHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEE--CCHHHHHHHHHHhc
Confidence 3479999999886422 333321 23459999999876 444556667764 55543 22212100 0000
Q ss_pred CCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEecCC
Q 013903 260 GVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQDL 305 (434)
Q Consensus 260 ~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE~ea 305 (434)
...+=+.++++..++... +...++..++-|+|.-+++++.-.
T Consensus 131 ~~~~fD~V~~d~~~~~~~----~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYL----PDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCCCSEEEECSCGGGHH----HHHHHHHHTTCCCTTCEEEESCCC
T ss_pred CCCceEEEEEcCCcccch----HHHHHHHhccccCCCeEEEEeCCC
Confidence 112235666664322111 123456656899999999886433
No 17
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=90.96 E-value=0.98 Score=44.77 Aligned_cols=110 Identities=17% Similarity=0.240 Sum_probs=59.5
Q ss_pred HHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccc
Q 013903 176 QAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 176 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
..|++.+. -...-+|+|+|.|.|. +...|+.+. |.+++|+++. .+ ..+.|+.. -..+|.. .++.+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~-~~~~a~~~-~~v~~~~--~d~~~-- 257 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDL-PH-VIQDAPAF-SGVEHLG--GDMFD-- 257 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HH-HHTTCCCC-TTEEEEE--CCTTT--
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeh-HH-HHHhhhhc-CCCEEEe--cCCCC--
Confidence 45677765 3446799999999986 344444442 5678999997 32 22333332 1234432 22111
Q ss_pred cccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCE-EEEEecCCC
Q 013903 255 DVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKL-ITIVEQDLS 306 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~v-vv~vE~ea~ 306 (434)
.+ ..+++++.+.++|.+.+ .....+|+.+ +.|+|.- ++++|.-.+
T Consensus 258 ---~~--p~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 258 ---GV--PKGDAIFIKWICHDWSD--EHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ---CC--CCCSEEEEESCGGGBCH--HHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred ---CC--CCCCEEEEechhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 11 12466666554443322 1234677766 6789976 445565433
No 18
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=90.82 E-value=1.8 Score=42.67 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=62.7
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~~V~~~~ 250 (434)
..|++.+.-.+..+|+|+|.+.|. +...|+.+. |.+++|+++. .+ ...+.+...|+ ..+|..-.-.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~- 262 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF- 262 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-
Confidence 567777766667899999999996 444555442 4679999998 44 33333444554 3566543211
Q ss_pred cccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecCCC
Q 013903 251 GNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQDLS 306 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ea~ 306 (434)
+.+ + . .-++++.+.++|...+ .....+|+.+ +.|+|.-.+ ++|.-.+
T Consensus 263 ~~~--p----~-~~D~v~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 263 ETI--P----D-GADVYLIKHVLHDWDD--DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp TCC--C----S-SCSEEEEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred CCC--C----C-CceEEEhhhhhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 111 1 1 2345555433332221 1123577666 668997554 4455433
No 19
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=90.47 E-value=1.4 Score=42.95 Aligned_cols=131 Identities=13% Similarity=0.061 Sum_probs=78.7
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCcccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNI 253 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l 253 (434)
.|++.+.. .-.|+|+|.|.|.= --.++ ..+|..++++++-+.. .+.+++..+|+++.|.......+
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~GpL----Al~~~---~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-- 193 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNPL----AAPWM---GLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-- 193 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGGG----CCTTT---TCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS--
T ss_pred HHHhccCC--CceeeeeccCccHH----HHHHH---hhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc--
Confidence 45555533 44889999887742 11111 2347899999998876 66778888899988865321111
Q ss_pred ccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHh
Q 013903 254 IDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDAL 329 (434)
Q Consensus 254 ~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE~ea~~n~~F~~RF~eaL~yYsalFDsL 329 (434)
.--.+.+++.+|-+.|+|.+. .....++.+..|+|..|++.=+-=..++ |=..=-..|+..|+..
T Consensus 194 -----~p~~~~DvaL~lkti~~Le~q--~kg~g~~ll~aL~~~~vvVSfp~ksl~G----rs~gm~~~Y~~~~e~~ 258 (281)
T 3lcv_B 194 -----RLDEPADVTLLLKTLPCLETQ--QRGSGWEVIDIVNSPNIVVTFPTKSLGQ----RSKGMFQNYSQSFESQ 258 (281)
T ss_dssp -----CCCSCCSEEEETTCHHHHHHH--STTHHHHHHHHSSCSEEEEEEECC-----------CHHHHHHHHHHHH
T ss_pred -----CCCCCcchHHHHHHHHHhhhh--hhHHHHHHHHHhCCCCEEEeccchhhcC----CCcchhhHHHHHHHHH
Confidence 123456777788666666552 1223449999999999998744322333 1111124577777764
No 20
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=90.29 E-value=1.7 Score=42.45 Aligned_cols=109 Identities=17% Similarity=0.162 Sum_probs=60.8
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
..|++.+.-.+..+|+|+|.|.|. +...|+.+. |.+++|+++. .+ ...+.++..|++ .+|..- ++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d~ 241 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGG----MLAAIALRA---PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG--DF 241 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC--CT
T ss_pred HHHHHhCCCCCCCEEEEECCCcCH----HHHHHHHHC---CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeC--CC
Confidence 567777765566799999999993 445555442 4679999998 54 223334445653 566532 22
Q ss_pred c-ccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCE-EEEEec
Q 013903 251 G-NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKL-ITIVEQ 303 (434)
Q Consensus 251 e-~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~v-vv~vE~ 303 (434)
. .+ +. .-++++.+..+|.+.+ .....+|+.+ +.|+|.- ++++|.
T Consensus 242 ~~~~--~~-----~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 242 FKPL--PV-----TADVVLLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp TSCC--SC-----CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcC--CC-----CCCEEEEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 1 11 11 1234544433332211 1123666655 6789986 455665
No 21
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=90.24 E-value=2.1 Score=41.45 Aligned_cols=116 Identities=10% Similarity=0.097 Sum_probs=63.2
Q ss_pred HHHhhcCCCC-eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHHHHHHHcCCc--eEEeeeccCcc
Q 013903 177 AIFQALDGAD-CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLADFAMSLGLP--FDFNPLEGKIG 251 (434)
Q Consensus 177 AILEA~~g~~-~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~~fA~slgvp--FeF~~V~~~~e 251 (434)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+. |.+++|+++.+.- ...+.++..|+. .+|..- ++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~--d~~ 239 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEK--NLL 239 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEEC--CTT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeC--Ccc
Confidence 6788776555 7899999999996 444555442 3589999987321 344455556653 555542 222
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecCCC
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQDLS 306 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ea~ 306 (434)
+. . .+....-++++.+.++|.+.+ .....+|+.+ +.|+|.-.+ ++|.-.+
T Consensus 240 ~~-~--~~~~~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 240 DA-R--NFEGGAADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp CG-G--GGTTCCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred cC-c--ccCCCCccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 21 0 000111245544433332211 1235677655 678997655 4554433
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=90.23 E-value=0.84 Score=40.89 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=62.9
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHH---cCC------ceEEeeec
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMS---LGL------PFDFNPLE 247 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~s---lgv------pFeF~~V~ 247 (434)
.|++.+...+.-.|+|+|.+.|. +...|+.+. |..++|||+.+.+.+....+. .++ .++|..
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~-- 90 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ-- 90 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE--
T ss_pred HHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe--
Confidence 34444443444589999999986 555666542 347999999987643333322 233 344443
Q ss_pred cCccccccccccCCCCCceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEecCCCCC
Q 013903 248 GKIGNIIDVSQLGVRPGETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQDLSHG 308 (434)
Q Consensus 248 ~~~e~l~~~~~L~~~~~EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ea~~n 308 (434)
.++..+ +. ....=++++.+ .++|+ .+ .....+|+.+ +.|+|.-++++.....+|
T Consensus 91 ~d~~~~-~~---~~~~fD~V~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 91 SSLVYR-DK---RFSGYDAATVIEVIEHL-DE--NRLQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp CCSSSC-CG---GGTTCSEEEEESCGGGC-CH--HHHHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred Cccccc-cc---ccCCCCEEEEHHHHHhC-CH--HHHHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 222222 11 11122455544 34442 11 1235677655 778999888776654443
No 23
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=90.18 E-value=1.6 Score=41.23 Aligned_cols=109 Identities=10% Similarity=0.054 Sum_probs=57.1
Q ss_pred CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHH----cC---CceEEeeeccCcccccccc
Q 013903 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMS----LG---LPFDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 185 ~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~s----lg---vpFeF~~V~~~~e~l~~~~ 257 (434)
....+|+|+|.|.|.--..++..|+.+..+ -.+.+|||+++.+.|....+. -| +.|+|... ..+++....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKE--TSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECS--CHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEec--chhhhhhhh
Confidence 457899999999995444567777655211 133459999998855433332 13 44555432 222220000
Q ss_pred ccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 258 QLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 258 ~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.....++ +.|+.+ .+|| +. +...+|+.+ +-|+|.-.+++
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~-~~----d~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYY-VK----DIPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGG-CS----CHHHHHHHHHHTEEEEEEEEE
T ss_pred ccccCCCceeEEEEeeeeee-cC----CHHHHHHHHHHHcCCCcEEEE
Confidence 0001111 344444 3444 32 256667655 56799965544
No 24
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=89.85 E-value=2.7 Score=38.85 Aligned_cols=122 Identities=15% Similarity=0.022 Sum_probs=71.0
Q ss_pred HHHHhcCCCccchhHhHhHHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHH
Q 013903 158 QSYNSICPLIKFSHFTANQAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADF 233 (434)
Q Consensus 158 ~~f~~~sP~~kfa~~tANqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~f 233 (434)
..+|+..+...-.+......+++.+. -...-+|+|+|.|.|. +...|+.+ +..++|||+.+.. ...+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s~~~~~~a~~~ 88 (267)
T 3kkz_A 17 CDFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFLSGFIDIFNRN 88 (267)
T ss_dssp HHHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESCHHHHHHHHHH
T ss_pred HHHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCCHHHHHHHHHH
Confidence 33444444444444444555666665 2345689999998874 55666666 3459999999876 45555
Q ss_pred HHHcCCc--eEEeeeccCccccccccccCCCCC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 234 AMSLGLP--FDFNPLEGKIGNIIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 234 A~slgvp--FeF~~V~~~~e~l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
++..|++ .+|.. .+++++ ...++ +.++.+. ++|. ....+|+.+ +.|+|.-.+++
T Consensus 89 ~~~~~~~~~v~~~~--~d~~~~------~~~~~~fD~i~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 89 ARQSGLQNRVTGIV--GSMDDL------PFRNEELDLIWSEGAIYNI------GFERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp HHHTTCTTTEEEEE--CCTTSC------CCCTTCEEEEEESSCGGGT------CHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHcCCCcCcEEEE--cChhhC------CCCCCCEEEEEEcCCceec------CHHHHHHHHHHHcCCCCEEEE
Confidence 6667775 55543 333333 12222 4555543 3332 245666554 77899866654
No 25
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=89.71 E-value=3.1 Score=39.35 Aligned_cols=108 Identities=12% Similarity=0.081 Sum_probs=61.7
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.+ ...+.++..|++ .+|. ..++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~--~~d~ 131 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVR--IQGW 131 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEE--ECCG
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE--ECCH
Confidence 346666655556789999998875 4444444422 58999999876 444455666765 4443 2222
Q ss_pred cccccccccCCCCCceEEEe-ccccccccc-----CCChHHHHHHH-HhcCCCEEEEE
Q 013903 251 GNIIDVSQLGVRPGETIVVH-WMHHCLYDI-----TGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN-~~~h~l~~~-----~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.++ -..=++++.+ .++| +.+. ......+|+.+ +-|+|.-.+++
T Consensus 132 ~~~-------~~~fD~v~~~~~~~~-~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 132 EEF-------DEPVDRIVSLGAFEH-FADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp GGC-------CCCCSEEEEESCGGG-TTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred HHc-------CCCccEEEEcchHHh-cCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 222 1122455555 4444 3231 12235677654 77899866655
No 26
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=89.31 E-value=1.4 Score=39.37 Aligned_cols=103 Identities=24% Similarity=0.248 Sum_probs=57.2
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHH---HHHcCCc------eEEeeeccCccccccc
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADF---AMSLGLP------FDFNPLEGKIGNIIDV 256 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~f---A~slgvp------FeF~~V~~~~e~l~~~ 256 (434)
+.-.|+|+|.|.|. +...|+.+. |..++|||+.+.+.+... ++..|++ .+|.. .++... +.
T Consensus 29 ~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~--~d~~~~-~~ 98 (217)
T 3jwh_A 29 NARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ--GALTYQ-DK 98 (217)
T ss_dssp TCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE--CCTTSC-CG
T ss_pred CCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe--CCcccc-cc
Confidence 44589999999986 455566542 346999999987643333 3333442 44443 222222 11
Q ss_pred cccCCCCCceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEEecC
Q 013903 257 SQLGVRPGETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIVEQD 304 (434)
Q Consensus 257 ~~L~~~~~EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~e 304 (434)
....=++++.+. ++|+ .+ .....+|+.+ +.|+|.-++++...
T Consensus 99 ---~~~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 99 ---RFHGYDAATVIEVIEHL-DL--SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp ---GGCSCSEEEEESCGGGC-CH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ---cCCCcCEEeeHHHHHcC-CH--HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 112224555554 4442 11 1236777655 66899987776553
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.07 E-value=2.9 Score=39.06 Aligned_cols=107 Identities=12% Similarity=0.070 Sum_probs=57.7
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCcccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNI 253 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l 253 (434)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+. ++|||+.+.+ ...+.++..|+.-....+..++.++
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~~----~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYDV----NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHCC----EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcCC----EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 35555544455689999988876 44455533321 9999998876 3333444455532222233333333
Q ss_pred ccccccCCCCCceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 254 IDVSQLGVRPGETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 254 ~~~~~L~~~~~EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
. ..=+.|+.+ .++|+- ......+|+.+ +-|+|.-.+++
T Consensus 127 ------~-~~fD~v~~~~~l~~~~---~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 127 ------D-EPVDRIVSIGAFEHFG---HERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp ------C-CCCSEEEEESCGGGTC---TTTHHHHHHHHHHHSCTTCEEEE
T ss_pred ------C-CCeeEEEEeCchhhcC---hHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 222344444 444431 13456666654 67899865554
No 28
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=89.06 E-value=1.8 Score=38.45 Aligned_cols=107 Identities=19% Similarity=0.213 Sum_probs=59.4
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCcccccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIID 255 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~ 255 (434)
..+++.+...+.-.|+|+|.|.|. +...|+.+ ..++|||+.+.+.+....+.+.-..+|. ..++.++ .
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~--~~d~~~~-~ 102 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-----GRTVYGIEPSREMRMIAKEKLPKEFSIT--EGDFLSF-E 102 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-----TCEEEEECSCHHHHHHHHHHSCTTCCEE--SCCSSSC-C
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-----CCeEEEEeCCHHHHHHHHHhCCCceEEE--eCChhhc-C
Confidence 456666655566789999999985 55556665 2489999998875544444443122332 2223333 1
Q ss_pred ccccCCCCCceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 256 VSQLGVRPGETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 256 ~~~L~~~~~EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
. . ..=+.++.+. ++|+ .+ .....+|+. .+.|+|.-.+++
T Consensus 103 ~---~-~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 103 V---P-TSIDTIVSTYAFHHL-TD--DEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp C---C-SCCSEEEEESCGGGS-CH--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred C---C-CCeEEEEECcchhcC-Ch--HHHHHHHHHHHHhcCCCCEEEE
Confidence 1 1 2334555553 4442 22 011235654 477899866554
No 29
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=88.77 E-value=1.4 Score=42.55 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=58.5
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCcc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIG 251 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e 251 (434)
.|++.+.-.+..+|+|+|.+.| .+...|+.+. |.+++|+++. .+ ...+.+...|+. .+|..-.-. +
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~ 230 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-D 230 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-S
T ss_pred HHHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-C
Confidence 3445544345679999999999 3445555543 4679999988 44 333334445553 666543211 1
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEec
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQ 303 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~ 303 (434)
.+ + . .-++++.+.++|...+ .....+|+.+ +.|+|.-.+ ++|.
T Consensus 231 ~~--p----~-~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 231 PL--P----A-GAGGYVLSAVLHDWDD--LSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp CC--C----C-SCSEEEEESCGGGSCH--HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CC--C----C-CCcEEEEehhhccCCH--HHHHHHHHHHHHhcCCCCEEEEEee
Confidence 11 1 1 2345544433222211 1135677665 678997555 4454
No 30
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=88.46 E-value=1.5 Score=41.14 Aligned_cols=108 Identities=12% Similarity=0.035 Sum_probs=63.8
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGN 252 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~ 252 (434)
..+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ...+.++..|+..+|.. .++.+
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--~d~~~ 178 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNENSIAFLNETKEKENLNISTAL--YDINA 178 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEE--CCGGG
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHHHHHHHHHHHHHcCCceEEEE--ecccc
Confidence 455565554466789999999986 44556665 2 38999999876 45556666777665553 23333
Q ss_pred cccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+ .. -..=++++.|..+|.+. ......+|+.+ +.|+|.-++++
T Consensus 179 ~-~~----~~~fD~i~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 179 A-NI----QENYDFIVSTVVFMFLN--RERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp C-CC----CSCEEEEEECSSGGGSC--GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred c-cc----cCCccEEEEccchhhCC--HHHHHHHHHHHHHhcCCCcEEEE
Confidence 2 11 11124555554433221 12345677655 77899876444
No 31
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=88.24 E-value=6 Score=35.93 Aligned_cols=120 Identities=15% Similarity=0.085 Sum_probs=68.1
Q ss_pred HHhcCCCccchhHhHhHHHHhhcCC-CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHH
Q 013903 160 YNSICPLIKFSHFTANQAIFQALDG-ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAM 235 (434)
Q Consensus 160 f~~~sP~~kfa~~tANqAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~ 235 (434)
+++..+-..-.+......+++.+.+ ...-+|+|+|.|.|.. ...|+.+.+ . ++|||+.+.. ...+.++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~~---~-~v~~vD~s~~~~~~a~~~~~ 90 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYVK---G-QITGIDLFPDFIEIFNENAV 90 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHCC---S-EEEEEESCHHHHHHHHHHHH
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhCC---C-eEEEEECCHHHHHHHHHHHH
Confidence 3343444334444455556666643 2345899999999864 344444432 2 9999999876 4555666
Q ss_pred HcCCc--eEEeeeccCccccccccccCCCCC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 236 SLGLP--FDFNPLEGKIGNIIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 236 slgvp--FeF~~V~~~~e~l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
..|++ .+|.. .++.++ ...++ +.++.+. ++|. +...+|+.+ +-|+|.-.+++
T Consensus 91 ~~~~~~~~~~~~--~d~~~~------~~~~~~fD~v~~~~~l~~~------~~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 91 KANCADRVKGIT--GSMDNL------PFQNEELDLIWSEGAIYNI------GFERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp HTTCTTTEEEEE--CCTTSC------SSCTTCEEEEEEESCSCCC------CHHHHHHHHHTTEEEEEEEEE
T ss_pred HcCCCCceEEEE--CChhhC------CCCCCCEEEEEecChHhhc------CHHHHHHHHHHHcCCCcEEEE
Confidence 77876 55543 333333 12222 4555553 3442 256677655 66899766654
No 32
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=87.54 E-value=1.5 Score=42.19 Aligned_cols=98 Identities=12% Similarity=0.073 Sum_probs=65.4
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
.-.|+|+|.|.|. |--.+ + |..+++|++-+.. .+.+++...|+++.|.......... -.+
T Consensus 106 p~~VLDlGCG~gp----Lal~~--~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~-------~~~ 168 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYE--R----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP-------AEA 168 (253)
T ss_dssp CSEEEEETCTTTH----HHHHH--T----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC-------CCB
T ss_pred CCeEEEecCCccH----HHHHh--c----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC-------CCC
Confidence 4489999998774 11111 1 6789999998876 7777888889999988643211111 125
Q ss_pred CceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEec
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQ 303 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE~ 303 (434)
.+++.++-+.|+|.+.. ....++.+..|+|..|++.=+
T Consensus 169 ~DvvLllk~lh~LE~q~--~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 169 GDLALIFKLLPLLEREQ--AGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CSEEEEESCHHHHHHHS--TTHHHHHHHHCBCSEEEEEEE
T ss_pred cchHHHHHHHHHhhhhc--hhhHHHHHHHhcCCCEEEEcC
Confidence 67787886666665522 224458888999998888644
No 33
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=87.14 E-value=10 Score=34.39 Aligned_cols=105 Identities=13% Similarity=0.162 Sum_probs=60.2
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCc
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKI 250 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~ 250 (434)
+.-+++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|||+.+.+ ...+.++..|++ ++|.. .++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~--~d~ 78 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKEMVEVASSFAQEKGVENVRFQQ--GTA 78 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEE--CBT
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEe--ccc
Confidence 3445555655566789999999886 444555542 2 8999999876 334444555654 44442 233
Q ss_pred cccccccccCCCCC--ceEEEe-cccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 251 GNIIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 251 e~l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
+++ ...++ +.++.+ .++|. . ....+|+. .+-|+|.-.+++
T Consensus 79 ~~~------~~~~~~fD~v~~~~~l~~~-~----~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 79 ESL------PFPDDSFDIITCRYAAHHF-S----DVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp TBC------CSCTTCEEEEEEESCGGGC-S----CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccC------CCCCCcEEEEEECCchhhc-c----CHHHHHHHHHHHcCCCcEEEE
Confidence 333 22222 445544 34442 2 24556654 577899866654
No 34
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.08 E-value=8 Score=35.05 Aligned_cols=106 Identities=17% Similarity=0.122 Sum_probs=60.3
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeecc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEG 248 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~ 248 (434)
.-..|++.+.-...-+|+|+|.|.|.. ...|+.+.+ .++|||+.+.+ ...+.++..|++ .+|.. .
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~--~ 93 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH--N 93 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--S
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE--C
Confidence 344556665544556899999999874 334444332 27899999876 444556667765 66653 2
Q ss_pred CccccccccccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 249 KIGNIIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 249 ~~e~l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+++++ .. ++ ++|+.+ .++|. + ....+|+.+ +-|+|.-.+++
T Consensus 94 d~~~~------~~-~~~fD~V~~~~~~~~~----~-~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 94 DAAGY------VA-NEKCDVAACVGATWIA----G-GFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp CCTTC------CC-SSCEEEEEEESCGGGT----S-SSHHHHHHHTTSEEEEEEEEE
T ss_pred ChHhC------Cc-CCCCCEEEECCChHhc----C-CHHHHHHHHHHHcCCCeEEEE
Confidence 33333 11 12 344333 34442 2 245666554 67899865554
No 35
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=87.05 E-value=5.3 Score=34.54 Aligned_cols=106 Identities=11% Similarity=0.117 Sum_probs=60.1
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC-ceEEeeeccCc
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL-PFDFNPLEGKI 250 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv-pFeF~~V~~~~ 250 (434)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+.+.. ...+.++..|+ ..+|.. .++
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--~d~ 89 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAMSIANVERIKSIENLDNLHTRV--VDL 89 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE--CCG
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEE--cch
Confidence 3466666664455599999999886 34455555 2 38999998876 33444445565 445443 222
Q ss_pred cccccccccCC-CCCceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEE
Q 013903 251 GNIIDVSQLGV-RPGETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITI 300 (434)
Q Consensus 251 e~l~~~~~L~~-~~~EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~ 300 (434)
.++ .. ..=+.++.+. ++| +. +.....+|+.+ +.|+|.-.++
T Consensus 90 ~~~------~~~~~~D~v~~~~~l~~-~~--~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 90 NNL------TFDRQYDFILSTVVLMF-LE--AKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp GGC------CCCCCEEEEEEESCGGG-SC--GGGHHHHHHHHHHTEEEEEEEE
T ss_pred hhC------CCCCCceEEEEcchhhh-CC--HHHHHHHHHHHHHhcCCCeEEE
Confidence 222 12 1114555553 343 21 12356677655 6789986643
No 36
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=86.79 E-value=1.5 Score=43.28 Aligned_cols=102 Identities=19% Similarity=0.287 Sum_probs=62.6
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHHHHHHHcCCc--eEEeeeccCccccccccccCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~~~ 262 (434)
.-.|+|+|.|.|. +...|+.+ +.-+++||+.+.- ...+.++..|++ .+|. ..+++++ . +.-.
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~--~~d~~~~-~---~~~~ 132 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECSSISDYAVKIVKANKLDHVVTII--KGKVEEV-E---LPVE 132 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEE--ESCTTTC-C---CSSS
T ss_pred CCEEEEEeccchH----HHHHHHHC----CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEE--ECcHHHc-c---CCCC
Confidence 3479999999995 45556665 2459999998831 444455566766 4544 3334443 1 1111
Q ss_pred CCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEec
Q 013903 263 PGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 263 ~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
+=++|+.|++.+.+.. ......+|..+ +-|+|.-+++.+.
T Consensus 133 ~fD~Iis~~~~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFY-ESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CEEEEEECCCBBTBTB-TCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ceEEEEEccccccccC-chhHHHHHHHHHHhCCCCCEEcccc
Confidence 2256666666554433 35567888776 7899998887433
No 37
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=86.50 E-value=4.5 Score=39.25 Aligned_cols=111 Identities=19% Similarity=0.156 Sum_probs=60.1
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
+.|++.+.-.+.-+|+|+|.|.|.- ...|+.+. |.+++|+++. .+ ...+.++..|++ ++|..- ++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d~ 242 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGF----AAAIARRA---PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG--DF 242 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC--CT
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHH----HHHHHHhC---CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeC--CC
Confidence 5677777655667999999999953 34444432 4579999996 33 333444455663 666542 22
Q ss_pred cccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCE-EEEEecC
Q 013903 251 GNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKL-ITIVEQD 304 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~v-vv~vE~e 304 (434)
.+- +.- .-++++.+..+|.+.+ .....+|+.+ +.|+|.- ++++|..
T Consensus 243 ~~~-----~~~-~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 243 FEP-----LPR-KADAIILSFVLLNWPD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp TSC-----CSS-CEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCC-----CCC-CccEEEEcccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 111 110 1234444433222211 1124667655 6689986 4455654
No 38
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=86.49 E-value=3 Score=36.46 Aligned_cols=106 Identities=16% Similarity=0.146 Sum_probs=60.3
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC-ceEEeeeccCccccccccccCCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL-PFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv-pFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
-+|+|+|.|.|.- ...++.+. .-++|||+.+.+ ...+-++..|+ ..+|. ..++.++. ..+.-..
T Consensus 46 ~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~--~~d~~~~~--~~~~~~~ 113 (189)
T 3p9n_A 46 LAVLDLYAGSGAL----GLEALSRG----AASVLFVESDQRSAAVIARNIEALGLSGATLR--RGAVAAVV--AAGTTSP 113 (189)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEE--ESCHHHHH--HHCCSSC
T ss_pred CEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECCHHHHHHHHHHHHHcCCCceEEE--EccHHHHH--hhccCCC
Confidence 4799999998853 22233342 348999999876 44445566676 34443 23333321 1111122
Q ss_pred CceEEEecccccccccCCChHHHHHHHHh---cCCCEEEEEecCCCCC
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRMLTL---LRPKLITIVEQDLSHG 308 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~ir~---L~P~vvv~vE~ea~~n 308 (434)
=+.++.|...|.. ......+|..+.+ |+|.-+++++.+....
T Consensus 114 fD~i~~~~p~~~~---~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 114 VDLVLADPPYNVD---SADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp CSEEEECCCTTSC---HHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred ccEEEECCCCCcc---hhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 3577777543311 1235667777764 9999999887765443
No 39
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=86.24 E-value=6.3 Score=34.80 Aligned_cols=107 Identities=13% Similarity=0.104 Sum_probs=58.7
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCC--ceEEeeeccCccccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGL--PFDFNPLEGKIGNII 254 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgv--pFeF~~V~~~~e~l~ 254 (434)
.|...+...+.-+|+|+|.|.|. +...|+.+ .-++|||+.+.+.+....+.+.- ..+|.. .++.++
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~--~d~~~~- 109 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH-----CKRLTVIDVMPRAIGRACQRTKRWSHISWAA--TDILQF- 109 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG-----EEEEEEEESCHHHHHHHHHHTTTCSSEEEEE--CCTTTC-
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc-----CCEEEEEECCHHHHHHHHHhcccCCCeEEEE--cchhhC-
Confidence 34445556677899999999994 45556655 24899999987744433333321 344432 333333
Q ss_pred cccccCCCCCceEEEec-ccccccccCCChHHHHH-HHHhcCCCEEEEE
Q 013903 255 DVSQLGVRPGETIVVHW-MHHCLYDITGSDLGTLR-MLTLLRPKLITIV 301 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~-~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~v 301 (434)
.+ -..=+.++.|. ++| +.+ +.....+|+ ..+.|+|.-++++
T Consensus 110 ~~----~~~fD~v~~~~~l~~-~~~-~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 110 ST----AELFDLIVVAEVLYY-LED-MTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp CC----SCCEEEEEEESCGGG-SSS-HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CC----CCCccEEEEccHHHh-CCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 11 11114555553 344 222 112245565 4577899877665
No 40
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=85.52 E-value=7 Score=36.29 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=56.8
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHc-CCceEEeeeccCccccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSL-GLPFDFNPLEGKIGNII 254 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~sl-gvpFeF~~V~~~~e~l~ 254 (434)
+.+++.+.-...-+|+|+|.|.|.-- ..|+. + ..++|||+.+.+.+....+.+ ++.| .. .+.+++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~----~~l~~-~----~~~v~gvD~s~~~~~~a~~~~~~~~~--~~--~d~~~~- 112 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLT----EKIAQ-S----GAEVLGTDNAATMIEKARQNYPHLHF--DV--ADARNF- 112 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHH----HHHHH-T----TCEEEEEESCHHHHHHHHHHCTTSCE--EE--CCTTTC-
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHH----HHHHh-C----CCeEEEEECCHHHHHHHHhhCCCCEE--EE--CChhhC-
Confidence 34556665455568999999998643 34443 2 348999999887555444433 3333 22 222232
Q ss_pred cccccCCC-CCceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 255 DVSQLGVR-PGETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 255 ~~~~L~~~-~~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
... .=+.++.+..+|.+. +...+|+. .+.|+|.-.+++.
T Consensus 113 -----~~~~~fD~v~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 113 -----RVDKPLDAVFSNAMLHWVK----EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp -----CCSSCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CcCCCcCEEEEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEE
Confidence 111 113455554332222 24566654 5778998766654
No 41
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=84.68 E-value=3.6 Score=38.40 Aligned_cols=107 Identities=13% Similarity=0.157 Sum_probs=58.4
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccc
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
+++.+... .-+|+|+|.|.|. +...|+.+ + .++|||+.+.+ ...+.++..|++-....+..++.++
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 129 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDV- 129 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGT-
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHh-
Confidence 44444433 5789999999984 55566665 2 38999999876 3444455556642222233333333
Q ss_pred cccccCCCCCceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 255 DVSQLGVRPGETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
. .+.-..=++|+.+. ++| + + ....+|+. .+-|+|.-++++.
T Consensus 130 ~--~~~~~~fD~v~~~~~l~~-~---~-~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 130 A--SHLETPVDLILFHAVLEW-V---A-DPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp G--GGCSSCEEEEEEESCGGG-C---S-CHHHHHHHHHHTEEEEEEEEEE
T ss_pred h--hhcCCCceEEEECchhhc-c---c-CHHHHHHHHHHHcCCCeEEEEE
Confidence 1 01111124555443 334 2 2 23556654 4778998777654
No 42
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=84.54 E-value=2.7 Score=41.30 Aligned_cols=114 Identities=16% Similarity=0.143 Sum_probs=62.2
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHHHHHHHcCCceEEeeeccCccc
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLADFAMSLGLPFDFNPLEGKIGN 252 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~~fA~slgvpFeF~~V~~~~e~ 252 (434)
.++|++.+...+.-+|+|+|.|.|. |...++.++ .-++|||+.+.. ...+.++..|++=....+..++++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhh
Confidence 3677777765555689999999885 445555552 348999998742 222233334653222333344444
Q ss_pred cccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEe
Q 013903 253 IIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVE 302 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE 302 (434)
+ .. . ..=+.|+.+.+.+.+.. ......+...-+-|+|.-+++..
T Consensus 111 ~-~~---~-~~~D~Ivs~~~~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 111 V-SL---P-EQVDIIISEPMGYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp C-CC---S-SCEEEEEECCCBTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred C-CC---C-CceeEEEEeCchhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 3 11 1 11245666655332221 11234444555788999888743
No 43
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=84.20 E-value=8.2 Score=35.41 Aligned_cols=105 Identities=19% Similarity=0.246 Sum_probs=59.2
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
..|++.+.-...-+|+|+|.|.|.. ...|+.+.+ .++|||+.+.+ ...+.++..|++ .+|.. .+.
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~ 120 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKP----AVRLATARD----VRVTGISISRPQVNQANARATAAGLANRVTFSY--ADA 120 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHH----HHHHHHHSC----CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--CCT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHH----HHHHHHhcC----CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE--Ccc
Confidence 3455555544556999999988863 344444432 48999998876 344455556764 55543 223
Q ss_pred cccccccccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 251 GNIIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 251 e~l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.++ ...++ +.|+.+ .++|+ .....+|+.+ +-|+|.-.+++
T Consensus 121 ~~~------~~~~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 121 MDL------PFEDASFDAVWALESLHHM-----PDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp TSC------CSCTTCEEEEEEESCTTTS-----SCHHHHHHHHHTTEEEEEEEEE
T ss_pred ccC------CCCCCCccEEEEechhhhC-----CCHHHHHHHHHHHcCCCeEEEE
Confidence 332 12222 344444 34442 2246667655 66899865544
No 44
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=84.14 E-value=7.1 Score=34.55 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=52.2
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
.-+|+|+|.|.|. +...|+.+ ++ ++|||+.+.+ ...+.++..+...+|.. .++.++ . +.-..
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--~d~~~~-~---~~~~~ 103 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISEDMIRKAREYAKSRESNVEFIV--GDARKL-S---FEDKT 103 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEE--CCTTSC-C---SCTTC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHHHHHHHHHHHHhcCCCceEEE--CchhcC-C---CCCCc
Confidence 4589999999984 34555554 33 9999998876 33334444454455543 222222 1 11112
Q ss_pred CceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
=+.++.|...|.. .. .....+|+. .+.|+|.-.+++
T Consensus 104 ~D~v~~~~~~~~~-~~-~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 104 FDYVIFIDSIVHF-EP-LELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp EEEEEEESCGGGC-CH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEEcCchHhC-CH-HHHHHHHHHHHHHcCCCcEEEE
Confidence 2456555432211 11 123456654 467899865554
No 45
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=84.06 E-value=3.7 Score=46.05 Aligned_cols=117 Identities=16% Similarity=0.207 Sum_probs=65.1
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHH---------HcCCceEEeeecc
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAM---------SLGLPFDFNPLEG 248 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~---------slgvpFeF~~V~~ 248 (434)
|++.+...+.-.|+|+|.|.|. +...|+.+ ++|.-+||||+.+.+.|....+ ..|++ ....+..
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqG 785 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDG 785 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEES
T ss_pred HHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEEC
Confidence 4444443345579999999994 55666654 3466799999998763322212 22443 3333334
Q ss_pred CccccccccccCCCCCceEEEe-cccccccccCCChHHHHHH-HHhcCCCEEEEEecCCCCC
Q 013903 249 KIGNIIDVSQLGVRPGETIVVH-WMHHCLYDITGSDLGTLRM-LTLLRPKLITIVEQDLSHG 308 (434)
Q Consensus 249 ~~e~l~~~~~L~~~~~EaLaVN-~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE~ea~~n 308 (434)
++.++ .. ....=++|+.+ .++|+ .+ .....+++. .+-|+|.++++...+.++|
T Consensus 786 Da~dL-p~---~d~sFDlVV~~eVLeHL-~d--p~l~~~L~eI~RvLKPG~LIISTPN~eyN 840 (950)
T 3htx_A 786 SILEF-DS---RLHDVDIGTCLEVIEHM-EE--DQACEFGEKVLSLFHPKLLIVSTPNYEFN 840 (950)
T ss_dssp CTTSC-CT---TSCSCCEEEEESCGGGS-CH--HHHHHHHHHHHHTTCCSEEEEEECBGGGH
T ss_pred chHhC-Cc---ccCCeeEEEEeCchhhC-Ch--HHHHHHHHHHHHHcCCCEEEEEecCchhh
Confidence 44444 11 11223566555 34453 22 112356654 6889999777777665444
No 46
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=83.97 E-value=8.4 Score=36.42 Aligned_cols=106 Identities=11% Similarity=-0.035 Sum_probs=53.0
Q ss_pred eEEEEcccCC---ccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcC--CceEEeeeccCccccc----cc--
Q 013903 188 VHIIDLDIMQ---GLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLG--LPFDFNPLEGKIGNII----DV-- 256 (434)
Q Consensus 188 VHIIDfgI~~---G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slg--vpFeF~~V~~~~e~l~----~~-- 256 (434)
-+|+|+|.|. |. +. +.+..+. |..|+|+|+.+...|..--+.+. -..+|.. .++.+.. .+
T Consensus 79 ~~vLDlGcG~pt~G~-~~---~~~~~~~---p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~--~D~~~~~~~~~~~~~ 149 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQN-TH---EVAQSVN---PDARVVYVDIDPMVLTHGRALLAKDPNTAVFT--ADVRDPEYILNHPDV 149 (274)
T ss_dssp CEEEEETCCSCCSSC-HH---HHHHHHC---TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEE--CCTTCHHHHHHSHHH
T ss_pred CEEEEECCCCCCCCh-HH---HHHHHhC---CCCEEEEEECChHHHHHHHHhcCCCCCeEEEE--eeCCCchhhhccchh
Confidence 4899999998 73 33 2332221 34699999988764432222222 1344443 2222210 00
Q ss_pred -cccCCCCCceEEEecccccccccCCChHHHHHHHHh-cCCCEEEE-EecC
Q 013903 257 -SQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTL-LRPKLITI-VEQD 304 (434)
Q Consensus 257 -~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~-L~P~vvv~-vE~e 304 (434)
..+....-.+++.+.++|.+.+ .....+|+.+++ |+|.-.++ .+..
T Consensus 150 ~~~~d~~~~d~v~~~~vlh~~~d--~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 150 RRMIDFSRPAAIMLVGMLHYLSP--DVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHCCTTSCCEEEETTTGGGSCT--TTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred hccCCCCCCEEEEEechhhhCCc--HHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 1122222245555544443333 246678877655 99975444 4443
No 47
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=83.94 E-value=12 Score=31.72 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=59.0
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCc-c
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKI-G 251 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~-e 251 (434)
+.+++.+.-...-+|+|+|.|.|. +...|+.+. |..++|||+.+.+ ...+.++..|++-.+ .+..+. +
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 345555555566789999999874 445555553 4689999999876 444455566776222 222222 2
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.+ + .. ...=++++++...+. ..+|+.+ +.|+|.-.+++
T Consensus 87 ~~--~-~~-~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 87 AF--D-DV-PDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp GG--G-GC-CSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEE
T ss_pred hh--h-cc-CCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEE
Confidence 22 1 00 022356666543221 3455544 66899766654
No 48
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=83.46 E-value=7.5 Score=35.22 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=58.4
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccc
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
+++.....+.-+|+|+|.|.|. +...|+.+ + .++|||+.+.+ ...+-++..|+..+|.. .++.++
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~--~d~~~~- 100 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHEEMLRVARRKAKERNLKIEFLQ--GDVLEI- 100 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHHHTTCCCEEEE--SCGGGC-
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHHHHhcCCceEEEE--CChhhc-
Confidence 3444433445689999999985 34455554 2 38999999877 33334445566655543 223232
Q ss_pred cccccCCCCCceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEec
Q 013903 255 DVSQLGVRPGETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
.. . ..=++++.+ ..++.+ . ......+|+.+ +.|+|.-+++++-
T Consensus 101 ~~---~-~~fD~v~~~~~~~~~~-~-~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 101 AF---K-NEFDAVTMFFSTIMYF-D-EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CC---C-SCEEEEEECSSGGGGS-C-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---C-CCccEEEEcCCchhcC-C-HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 11 1 111334332 222211 1 12345666654 6789998888763
No 49
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=83.02 E-value=1.9 Score=42.09 Aligned_cols=112 Identities=7% Similarity=-0.016 Sum_probs=59.3
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCC--ceEEeeeccCccc
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGL--PFDFNPLEGKIGN 252 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgv--pFeF~~V~~~~e~ 252 (434)
...|++.+.-.+.-+|+|+|.|.|.- ...|+.+. |.+++|+++.+.....+.++..++ ..+|..- ++.+
T Consensus 173 ~~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~--d~~~ 243 (348)
T 3lst_A 173 HLILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEG--DFLR 243 (348)
T ss_dssp HHHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECHHHHTTCCCCCGGGTTSEEEEEC--CTTT
T ss_pred HHHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCHHHhhcccccccCCCCCeEEEec--CCCC
Confidence 34678887656678999999999963 34444432 468999999743211111111222 2455432 1111
Q ss_pred cccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEE-EEecC
Q 013903 253 IIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLIT-IVEQD 304 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv-~vE~e 304 (434)
.+. .-++++.+.++|...+ .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 244 -----~~p--~~D~v~~~~vlh~~~d--~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 244 -----EVP--HADVHVLKRILHNWGD--EDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp -----CCC--CCSEEEEESCGGGSCH--HHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred -----CCC--CCcEEEEehhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 111 3345555544332222 1124677665 678997555 44543
No 50
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=82.95 E-value=13 Score=34.61 Aligned_cols=110 Identities=15% Similarity=0.117 Sum_probs=60.1
Q ss_pred HHHHhhc----CCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeee
Q 013903 176 QAIFQAL----DGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPL 246 (434)
Q Consensus 176 qAILEA~----~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V 246 (434)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+.+.. ...+.++..|++ ++|..
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~- 138 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKY- 138 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEE-
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE-
Confidence 3455555 33445689999999887544444433 2 28999998876 333444555654 55543
Q ss_pred ccCccccccccccCCCCC--ceEEEe-cccccccccCCChHHHHHH-HHhcCCCEEEE-EecCCC
Q 013903 247 EGKIGNIIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRM-LTLLRPKLITI-VEQDLS 306 (434)
Q Consensus 247 ~~~~e~l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~-vE~ea~ 306 (434)
.++.++ ...++ ++|+.+ .++|+ +. ...+|+. .+-|+|.-.++ ++....
T Consensus 139 -~d~~~~------~~~~~~fD~v~~~~~l~~~----~~-~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 139 -GSFLEI------PCEDNSYDFIWSQDAFLHS----PD-KLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp -CCTTSC------SSCTTCEEEEEEESCGGGC----SC-HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred -cCcccC------CCCCCCEeEEEecchhhhc----CC-HHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 223332 22222 344444 34442 22 5666654 47789976554 444333
No 51
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=82.80 E-value=7.8 Score=35.09 Aligned_cols=107 Identities=15% Similarity=0.112 Sum_probs=58.2
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDV 256 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~ 256 (434)
.+++.+.....-+|+|+|.|.|.--..|.+.+ |..++|||+.+.+.+.. |+...-..+|.. .+.+++ .+
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~~~~~-a~~~~~~~~~~~--~d~~~~-~~ 92 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDDMLEK-AADRLPNTNFGK--ADLATW-KP 92 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHHHHHH-HHHHSTTSEEEE--CCTTTC-CC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHHHHHH-HHHhCCCcEEEE--CChhhc-Cc
Confidence 45555544455689999999987555554443 23479999988764433 333222334432 222232 11
Q ss_pred cccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 257 SQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 257 ~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
-..=+.++.|..+|.+ .....+|+.+ +.|+|.-.+++.
T Consensus 93 ----~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 93 ----AQKADLLYANAVFQWV----PDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp ----SSCEEEEEEESCGGGS----TTHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----cCCcCEEEEeCchhhC----CCHHHHHHHHHHhcCCCeEEEEE
Confidence 0111455555433222 2356666655 788998666553
No 52
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=82.13 E-value=7.7 Score=34.89 Aligned_cols=95 Identities=15% Similarity=0.002 Sum_probs=51.6
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH---HHHHHcCC--ceEEeeeccCccccccccccCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA---DFAMSLGL--PFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~---~fA~slgv--pFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
-.|+|+|.|.|. +...|+. +..++|||+.+...+. +.+...+. ..+|.. .++.++ .+. .
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~-~~~----~ 131 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISESALAKANETYGSSPKAEYFSFVK--EDVFTW-RPT----E 131 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEEC--CCTTTC-CCS----S
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEE--CchhcC-CCC----C
Confidence 499999999885 3345554 2468999999876333 33333222 244443 223333 111 0
Q ss_pred CCceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 263 PGETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 263 ~~EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.=++++.+. ++| +. +.....+|+.+ +.|+|.-.+++
T Consensus 132 ~fD~v~~~~~l~~-~~--~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 132 LFDLIFDYVFFCA-IE--PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CEEEEEEESSTTT-SC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEEEChhhhc-CC--HHHHHHHHHHHHHHCCCCcEEEE
Confidence 113444443 333 21 23456777766 55899877765
No 53
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=81.96 E-value=9 Score=32.35 Aligned_cols=100 Identities=6% Similarity=-0.036 Sum_probs=57.9
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC-ceEEeeeccCccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL-PFDFNPLEGKIGN 252 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv-pFeF~~V~~~~e~ 252 (434)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+.+.+ ...+.++..|+ ..+|.. .++.+
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~--~d~~~ 94 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK--GRAED 94 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE--SCHHH
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE--CCccc
Confidence 34444444445589999999987 3344444 3569999998876 44445555665 344432 22222
Q ss_pred cccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~v 301 (434)
.. +. ..=+.++.|.. .....+|+.++++ |.-.+++
T Consensus 95 ~~-~~----~~~D~i~~~~~--------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 95 VL-DK----LEFNKAFIGGT--------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp HG-GG----CCCSEEEECSC--------SCHHHHHHHHHHT-TCCEEEE
T ss_pred cc-cC----CCCcEEEECCc--------ccHHHHHHHHhhC-CCCEEEE
Confidence 10 11 12245554433 3467889999888 8755554
No 54
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=81.80 E-value=8.5 Score=32.77 Aligned_cols=111 Identities=11% Similarity=-0.061 Sum_probs=64.1
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc---eEEeeec
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP---FDFNPLE 247 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp---FeF~~V~ 247 (434)
..+.+++.+.-.+.-+|+|+|.|.|. +...++.+ ..++|||+.+.+ ...+.++..|++ .+|..
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-- 108 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVH-- 108 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEE--
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEE--
Confidence 44667777765566789999999884 44455555 238999998876 444445556765 55543
Q ss_pred cCccccccccccCCCCCceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEec
Q 013903 248 GKIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVEQ 303 (434)
Q Consensus 248 ~~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE~ 303 (434)
.++.+. +.-..=+.++.|...|. .......+|+. .+.|+|.-.+++..
T Consensus 109 ~d~~~~-----~~~~~~D~v~~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 109 SDLYEN-----VKDRKYNKIITNPPIRA---GKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp CSTTTT-----CTTSCEEEEEECCCSTT---CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Cchhcc-----cccCCceEEEECCCccc---chhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 222221 11112246666654331 11223456654 46789987666543
No 55
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=81.77 E-value=11 Score=33.56 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=58.9
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCC-ceEEeeeccCccc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGL-PFDFNPLEGKIGN 252 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgv-pFeF~~V~~~~e~ 252 (434)
.-..|.+.+.....-+|+|+|.|.|. +...|+.+ |. -++|||+.+.+.+....+...- .++|.. .++.+
T Consensus 31 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~ 100 (243)
T 3bkw_A 31 EWPALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLSEKMLARARAAGPDTGITYER--ADLDK 100 (243)
T ss_dssp THHHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHHHHHHHHHTSCSSSEEEEE--CCGGG
T ss_pred hHHHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCCHHHHHHHHHhcccCCceEEE--cChhh
Confidence 33467777765556689999999885 34455555 22 2899999887644433333321 233332 22222
Q ss_pred cccccccCCCCC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+ ...++ +.++.+. ++|. + ....+|+.+ +.|+|.-.+++
T Consensus 101 ~------~~~~~~fD~v~~~~~l~~~----~-~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 101 L------HLPQDSFDLAYSSLALHYV----E-DVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp C------CCCTTCEEEEEEESCGGGC----S-CHHHHHHHHHHHEEEEEEEEE
T ss_pred c------cCCCCCceEEEEecccccc----c-hHHHHHHHHHHhcCcCcEEEE
Confidence 2 12222 3444443 3442 2 355666554 67899866554
No 56
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=81.42 E-value=13 Score=35.07 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=58.8
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.+ ...+.++..|++ .+|. ..++
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~--~~d~ 149 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSKNQHARCEQVLASIDTNRSRQVL--LQGW 149 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEE--ESCG
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE--ECCh
Confidence 345665554455689999998875 3344444432 28999999876 333444445654 4443 2333
Q ss_pred cccccccccCCCCCceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 251 GNIIDVSQLGVRPGETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.++ + ..=++++.+ .++|+ .. .....+|+.+ +-|+|.-.+++
T Consensus 150 ~~~-~------~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 150 EDF-A------EPVDRIVSIEAFEHF-GH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp GGC-C------CCCSEEEEESCGGGT-CG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred HHC-C------CCcCEEEEeChHHhc-CH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 333 1 122455544 34442 11 2346666654 67899865554
No 57
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=81.37 E-value=13 Score=33.59 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=53.4
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHc---CCceEEeeeccCccccccccccCCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSL---GLPFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~sl---gvpFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
+.-+|+|+|.|.|.- ...|+.+ + .++|||+.+.+.+....+.+ .-.++|.. .+.+++ ...
T Consensus 39 ~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--~d~~~~------~~~ 101 (263)
T 2yqz_A 39 EEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDADAAMLEVFRQKIAGVDRKVQVVQ--ADARAI------PLP 101 (263)
T ss_dssp SCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESCHHHHHHHHHHTTTSCTTEEEEE--SCTTSC------CSC
T ss_pred CCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECCHHHHHHHHHHhhccCCceEEEE--cccccC------CCC
Confidence 456899999999864 2344444 2 38999999887554443332 23445443 223332 222
Q ss_pred CC--ceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 263 PG--ETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 263 ~~--EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
++ +.++.+..+|.+. ....+|+. .+-|+|.-.+++.
T Consensus 102 ~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 22 4555554333222 34566655 4778998766654
No 58
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=81.20 E-value=18 Score=32.66 Aligned_cols=108 Identities=13% Similarity=0.135 Sum_probs=63.1
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcC-CceEEeeeccCccc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLG-LPFDFNPLEGKIGN 252 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slg-vpFeF~~V~~~~e~ 252 (434)
.-+.|++.+...+.-.|+|+|.|.|. +...|+.+ ++. ++|||+.+.+.+....+.+. -..+|.. .++.+
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~ 101 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQ--KAIED 101 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHHHHHHHHHHCCCTTEEEEE--CCGGG
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCHHHHHHHHHhhccCCeEEEE--cchhh
Confidence 34556666666567889999999984 45556655 222 89999998875544444443 3344432 22222
Q ss_pred cccccccCCCCC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 253 IIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 253 l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
+ ...++ ++++.+. ++| + .....+|+.+ +.|+|.-.+++.
T Consensus 102 ~------~~~~~~fD~v~~~~~l~~-~----~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 102 I------AIEPDAYNVVLSSLALHY-I----ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp C------CCCTTCEEEEEEESCGGG-C----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred C------CCCCCCeEEEEEchhhhh-h----hhHHHHHHHHHHHcCCCcEEEEE
Confidence 2 22222 3454443 344 2 3356777655 668998777763
No 59
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=80.61 E-value=10 Score=33.74 Aligned_cols=107 Identities=7% Similarity=0.007 Sum_probs=57.6
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC-ceEEeeeccCccccccccccCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL-PFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv-pFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
.-.|+|+|.|.|.- ...|+.+. |..++|||+.+.+ ...+-++..|+ ..+|. ..++.++ +..+.-.
T Consensus 42 ~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~--~~d~~~~--~~~~~~~ 110 (214)
T 1yzh_A 42 NPIHVEVGSGKGAF----VSGMAKQN---PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLL--WVDGSDL--TDYFEDG 110 (214)
T ss_dssp CCEEEEESCTTSHH----HHHHHHHC---TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEE--ECCSSCG--GGTSCTT
T ss_pred CCeEEEEccCcCHH----HHHHHHHC---CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEE--eCCHHHH--HhhcCCC
Confidence 44699999999853 33444432 3568999999876 34445555666 34443 2333333 1111111
Q ss_pred CCceEEEeccccccc---c-cCCChHHHHHHH-HhcCCCEEEEEecC
Q 013903 263 PGETIVVHWMHHCLY---D-ITGSDLGTLRML-TLLRPKLITIVEQD 304 (434)
Q Consensus 263 ~~EaLaVN~~~h~l~---~-~~~~~~~~L~~i-r~L~P~vvv~vE~e 304 (434)
.=+.+++|....-.. . .......+|+.+ +.|+|.-+++++.+
T Consensus 111 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 111 EIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 225677774311000 0 001135677766 55999988777643
No 60
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=79.63 E-value=4.8 Score=39.06 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=57.1
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHHHHHHHcCCceEEeeeccCccccccccccCCCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG 264 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~ 264 (434)
.-+|+|+|.|.|. +...++.++ .-+++||+.+.- ...+.++..|++=....+..+++++ . +...+=
T Consensus 39 ~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~---~~~~~~ 106 (328)
T 1g6q_1 39 DKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-H---LPFPKV 106 (328)
T ss_dssp TCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-C---CSSSCE
T ss_pred CCEEEEecCccHH----HHHHHHHCC----CCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhc-c---CCCCcc
Confidence 3489999999995 334555542 248999998831 3333444456542222333444443 1 111122
Q ss_pred ceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 265 ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 265 EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
++++.+++.+.+.. ......+|..+ +-|+|.-+++.
T Consensus 107 D~Ivs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 107 DIIISEWMGYFLLY-ESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEEECCCBTTBST-TCCHHHHHHHHHHHEEEEEEEES
T ss_pred cEEEEeCchhhccc-HHHHHHHHHHHHhhcCCCeEEEE
Confidence 46666666444433 24456777665 77899987763
No 61
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=79.00 E-value=6.7 Score=38.47 Aligned_cols=107 Identities=15% Similarity=0.195 Sum_probs=56.4
Q ss_pred HHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccc
Q 013903 176 QAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 176 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+. |.+++|+++. .+ ..+.|+... ..+|.. .++.+
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~~-~~~~a~~~~-~v~~~~--~d~~~-- 263 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDL-PQ-VIENAPPLS-GIEHVG--GDMFA-- 263 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HH-HHTTCCCCT-TEEEEE--CCTTT--
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeCh-HH-HHHhhhhcC-CCEEEe--CCccc--
Confidence 56777765 2345789999999986 344555442 4678999997 33 333444321 234432 22111
Q ss_pred cccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEE-Eec
Q 013903 255 DVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITI-VEQ 303 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~-vE~ 303 (434)
.+ ...++++.+..+|.+.+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 264 ---~~--~~~D~v~~~~~lh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 264 ---SV--PQGDAMILKAVCHNWSD--EKCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp ---CC--CCEEEEEEESSGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CC--CCCCEEEEecccccCCH--HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 11 11355555543332222 1123677655 6689976444 454
No 62
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=78.57 E-value=20 Score=31.33 Aligned_cols=89 Identities=11% Similarity=-0.002 Sum_probs=50.6
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
.-+|+|+|.|.|. +...|+.+ |+ -++|||+.+.+ ...+-++..|+..+|. ..+..++ . ..
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~--~~d~~~~-~------~~ 112 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVDKEAVDVLIENLGEFKGKFKVF--IGDVSEF-N------SR 112 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEE--ESCGGGC-C------CC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEE--ECchHHc-C------CC
Confidence 4589999999997 44455555 21 28999999876 3333444556644443 3333333 1 12
Q ss_pred CceEEEecccccccccCCChHHHHHHHHhcC
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRMLTLLR 294 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~ 294 (434)
=+.++.|...|... .+....+|+.+.++-
T Consensus 113 ~D~v~~~~p~~~~~--~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 113 VDIVIMNPPFGSQR--KHADRPFLLKAFEIS 141 (207)
T ss_dssp CSEEEECCCCSSSS--TTTTHHHHHHHHHHC
T ss_pred CCEEEEcCCCcccc--CCchHHHHHHHHHhc
Confidence 35777885533221 133456777665554
No 63
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=78.56 E-value=12 Score=32.83 Aligned_cols=109 Identities=18% Similarity=0.246 Sum_probs=61.7
Q ss_pred hHhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccc
Q 013903 173 TANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGN 252 (434)
Q Consensus 173 tANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~ 252 (434)
...+.|++.+.....-+|+|+|.|.|. +...|+.+ + .++|||+.+...+....+..++.|... ...+
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~----~~~~ 105 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR-G----IEAVGVDGDRTLVDAARAAGAGEVHLA----SYAQ 105 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCHHHHHHHHHTCSSCEEEC----CHHH
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC-C----CEEEEEcCCHHHHHHHHHhcccccchh----hHHh
Confidence 355677777766566899999999984 55666666 2 289999988765444333323333221 1222
Q ss_pred cccccccCCCCC---ceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 253 IIDVSQLGVRPG---ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 253 l~~~~~L~~~~~---EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
+ ... ...++ +.++.+..+| ......+|+.+ +.|+|.-.+++.
T Consensus 106 ~-~~~--~~~~~~~fD~v~~~~~l~-----~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 106 L-AEA--KVPVGKDYDLICANFALL-----HQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp H-HTT--CSCCCCCEEEEEEESCCC-----SSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred h-ccc--ccccCCCccEEEECchhh-----hhhHHHHHHHHHHHhCCCeEEEEE
Confidence 2 000 11122 3555554433 23345666554 778998766653
No 64
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=78.42 E-value=23 Score=30.71 Aligned_cols=95 Identities=20% Similarity=0.173 Sum_probs=52.8
Q ss_pred EEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCCCc
Q 013903 189 HIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGE 265 (434)
Q Consensus 189 HIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~E 265 (434)
.|+|+|.|.|. +...|+.+ + .++|||+.+.+ ...+.++..|+..+|... ++.++ . +.-..=+
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--d~~~~-~---~~~~~fD 96 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQS--NLADF-D---IVADAWE 96 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSSHHHHHHHHHHHHHHTCCEEEECC--BTTTB-S---CCTTTCS
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECCHHHHHHHHHHHHhcCCceEEEEc--Chhhc-C---CCcCCcc
Confidence 89999998876 34556555 2 38999998876 333444445666665432 22222 1 1111224
Q ss_pred eEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 266 TIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 266 aLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
.++.+.. |. .......+|+.+ +.|+|.-.+++.
T Consensus 97 ~v~~~~~-~~---~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 97 GIVSIFC-HL---PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp EEEEECC-CC---CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred EEEEEhh-cC---CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 5554432 32 112345666554 678998776654
No 65
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=77.91 E-value=14 Score=35.91 Aligned_cols=108 Identities=12% Similarity=0.201 Sum_probs=56.3
Q ss_pred HHHhhc--CCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccc
Q 013903 177 AIFQAL--DGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 177 AILEA~--~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
.|++.+ .=.+.-+|+|+|.+.|. +...|+.+. |.+++|+++. .. ..+.|+... ..+|.. .++.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~-~~~~a~~~~-~v~~~~--~d~~~-- 247 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQ-PQ-VVGNLTGNE-NLNFVG--GDMFK-- 247 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEEC-HH-HHSSCCCCS-SEEEEE--CCTTT--
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEecc-HH-HHhhcccCC-CcEEEe--CccCC--
Confidence 566665 11233589999999986 444555442 4678999987 33 333344321 134432 22111
Q ss_pred cccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCC---C-EEEEEecCC
Q 013903 255 DVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRP---K-LITIVEQDL 305 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P---~-vvv~vE~ea 305 (434)
.+ ..-++++.+.++|.+.+ .....+|+.+ +.|+| . .++++|.-.
T Consensus 248 ---~~--~~~D~v~~~~vlh~~~d--~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 248 ---SI--PSADAVLLKWVLHDWND--EQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp ---CC--CCCSEEEEESCGGGSCH--HHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred ---CC--CCceEEEEcccccCCCH--HHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 11 12456666654442322 1123677665 66899 3 456666543
No 66
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=77.76 E-value=4.7 Score=36.06 Aligned_cols=99 Identities=16% Similarity=0.086 Sum_probs=54.7
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
+.-+|+|+|.|.|.- ...|+.+ + .++|||+.+.. ...+.+...|+..+|.. .++.++ . +. .
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~--~d~~~~-~---~~-~ 100 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLSQEMLSEAENKFRSQGLKPRLAC--QDISNL-N---IN-R 100 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSCHHHHHHHHHHHHHTTCCCEEEC--CCGGGC-C---CS-C
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECCHHHHHHHHHHHhhcCCCeEEEe--cccccC-C---cc-C
Confidence 456899999999873 3445554 2 37999998876 33333444555455543 223332 1 11 1
Q ss_pred CCceEEEec--ccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 263 PGETIVVHW--MHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 263 ~~EaLaVN~--~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
.=++++.+. ++|+ .+ +.....+|+.+ +.|+|.-+++++
T Consensus 101 ~fD~v~~~~~~l~~~-~~-~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 101 KFDLITCCLDSTNYI-ID-SDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CEEEEEECTTGGGGC-CS-HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CceEEEEcCcccccc-CC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 224555543 3442 11 12345666655 668998777764
No 67
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=77.64 E-value=6.4 Score=34.97 Aligned_cols=110 Identities=16% Similarity=0.113 Sum_probs=57.8
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH---HHHHH----cCC-ceEEeeeccC
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA---DFAMS----LGL-PFDFNPLEGK 249 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~---~fA~s----lgv-pFeF~~V~~~ 249 (434)
.++.+.....-+|+|+|.|.|.- ...|+.+. |..++|||+.+.+.|. +.|+. .++ ..+|. ..+
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~--~~d 89 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKH----PYKVARQN---PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYL--WAT 89 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHH----HHHHHHHC---TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEE--ECC
T ss_pred HHHHhhccCCCEEEEecCCCCHH----HHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEE--ecc
Confidence 34444445667899999999853 33444431 4579999999887444 34432 444 34443 233
Q ss_pred ccccccccccCCCCCceEEEeccccccc--ccCCChHHHHH-HHHhcCCCEEEEEe
Q 013903 250 IGNIIDVSQLGVRPGETIVVHWMHHCLY--DITGSDLGTLR-MLTLLRPKLITIVE 302 (434)
Q Consensus 250 ~e~l~~~~~L~~~~~EaLaVN~~~h~l~--~~~~~~~~~L~-~ir~L~P~vvv~vE 302 (434)
.+++ .. .-.. +.+.++.....++ ..+++ ..+|+ ..+-|+|.-.+++.
T Consensus 90 ~~~l-~~---~~~~-d~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 90 AERL-PP---LSGV-GELHVLMPWGSLLRGVLGSS-PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp STTC-CS---CCCE-EEEEEESCCHHHHHHHHTSS-SHHHHHHHHTEEEEEEEEEE
T ss_pred hhhC-CC---CCCC-CEEEEEccchhhhhhhhccH-HHHHHHHHHHcCCCcEEEEE
Confidence 3333 11 1111 3343332111111 12223 45555 45778999887773
No 68
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=77.07 E-value=6.7 Score=34.74 Aligned_cols=97 Identities=19% Similarity=0.240 Sum_probs=51.2
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHHcCC------ceEEeeeccCcccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMSLGL------PFDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~slgv------pFeF~~V~~~~e~l~~~~ 257 (434)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...+ .+.++..++ ..+|.. .+..++
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~d~~~~---- 95 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-G----YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKV--ENASSL---- 95 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEE--CCTTSC----
T ss_pred CCeEEEECCCCCH----HHHHHHhC-C----CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEE--eccccc----
Confidence 3479999999985 44455555 2 3899999887633 333334555 234432 222222
Q ss_pred ccCCCCC--ceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 258 QLGVRPG--ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 258 ~L~~~~~--EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
...++ ++++.+..++.+.+ +.....+|+.+ +.|+|.-.+++
T Consensus 96 --~~~~~~~D~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 96 --SFHDSSFDFAVMQAFLTSVPD-PKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp --CSCTTCEEEEEEESCGGGCCC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCCCceeEEEEcchhhcCCC-HHHHHHHHHHHHHHcCCCeEEEE
Confidence 12222 45555533222222 11123667655 67899766544
No 69
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=76.97 E-value=13 Score=33.23 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=57.6
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHH---HHHHHHHcCCceEEeeeccCcccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSER---LADFAMSLGLPFDFNPLEGKIGNI 253 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~r---L~~fA~slgvpFeF~~V~~~~e~l 253 (434)
.|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.+.+. ..+.+...+...+|... ++.++
T Consensus 26 ~~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--d~~~~ 91 (243)
T 3d2l_A 26 WVLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQ--DMREL 91 (243)
T ss_dssp HHHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEEC--CGGGC
T ss_pred HHHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEc--Chhhc
Confidence 345555432 479999999885 44556554 489999998763 33334444555555432 22222
Q ss_pred ccccccCCCCCceEEEe--cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 254 IDVSQLGVRPGETIVVH--WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 254 ~~~~~L~~~~~EaLaVN--~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
. +. ..=++++.+ .++|+ .. ......+|+.+ +.|+|.-.++++
T Consensus 92 -~---~~-~~fD~v~~~~~~~~~~-~~-~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 92 -E---LP-EPVDAITILCDSLNYL-QT-EADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp -C---CS-SCEEEEEECTTGGGGC-CS-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -C---CC-CCcCEEEEeCCchhhc-CC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 11 122455554 34442 11 12245566554 678999877764
No 70
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=76.95 E-value=2.3 Score=44.04 Aligned_cols=112 Identities=16% Similarity=0.139 Sum_probs=62.1
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHHHHHHHcCCc--eEEeeeccCcc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLADFAMSLGLP--FDFNPLEGKIG 251 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~~fA~slgvp--FeF~~V~~~~e 251 (434)
.+|++.+...+.-+|+|+|.|.|. +...|+.++ ..++|||+.+.. ...+.++..|+. .+|. ..+++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~--~~d~~ 217 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEASTMAQHAEVLVKSNNLTDRIVVI--PGKVE 217 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEECHHHHHHHHHHHHHTTCTTTEEEE--ESCTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEE--ECchh
Confidence 456676654455689999999886 444566542 459999998651 223334445663 4443 33344
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEec
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQ 303 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE~ 303 (434)
++ .. . ..=+.++.|.+.+.+.. ......+....+-|+|.-+++.+.
T Consensus 218 ~~-~~---~-~~fD~Ivs~~~~~~~~~-e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 218 EV-SL---P-EQVDIIISEPMGYMLFN-ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp TC-CC---S-SCEEEEECCCCHHHHTC-HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hC-cc---C-CCeEEEEEeCchHhcCc-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 43 11 1 11245666665332221 111234444557889998887543
No 71
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=76.81 E-value=17 Score=31.79 Aligned_cols=103 Identities=12% Similarity=0.222 Sum_probs=57.6
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccc
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNII 254 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~ 254 (434)
.+.|++.+. .+.-+|+|+|.|.|. +...|+.+ + .++|||+.+.+.+ +.|+.... +|. ..++.+.
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~----~~~~~~D~~~~~~-~~~~~~~~--~~~--~~d~~~~- 85 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN-G----TRVSGIEAFPEAA-EQAKEKLD--HVV--LGDIETM- 85 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT-T----CEEEEEESSHHHH-HHHHTTSS--EEE--ESCTTTC-
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc-C----CeEEEEeCCHHHH-HHHHHhCC--cEE--Ecchhhc-
Confidence 356667665 456789999999884 55566666 2 5899999887644 34444333 222 2222221
Q ss_pred cccccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 255 DVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 255 ~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.+...++ +.++.+ .++| + + +...+|+.+ +.|+|.-.+++
T Consensus 86 ---~~~~~~~~fD~v~~~~~l~~-~---~-~~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 86 ---DMPYEEEQFDCVIFGDVLEH-L---F-DPWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp ---CCCSCTTCEEEEEEESCGGG-S---S-CHHHHHHHTGGGEEEEEEEEE
T ss_pred ---CCCCCCCccCEEEECChhhh-c---C-CHHHHHHHHHHHcCCCCEEEE
Confidence 0112222 445444 3344 2 2 235677665 66799865554
No 72
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=76.74 E-value=4.9 Score=37.25 Aligned_cols=98 Identities=14% Similarity=0.095 Sum_probs=58.9
Q ss_pred EEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCCCc
Q 013903 189 HIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGE 265 (434)
Q Consensus 189 HIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~E 265 (434)
+|+|+|.|.| +|--.++.. .|..++++++-+.+ -..+.|...|+...+... + .. ....-.+-+
T Consensus 52 ~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~-d-~~-----~~~~~~~~D 117 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFL-N-KE-----SDVYKGTYD 117 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEE-C-CH-----HHHTTSEEE
T ss_pred eEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEe-c-cc-----ccCCCCCcC
Confidence 7899988765 444445443 34559999999876 556677788988554442 1 11 111112224
Q ss_pred eEEEecccccccccCCChHHHHHHHHhcCCCEEEEEec
Q 013903 266 TIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVEQ 303 (434)
Q Consensus 266 aLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE~ 303 (434)
++..+-++|+|.+. ....++.++.|+|..++|.=+
T Consensus 118 vVLa~k~LHlL~~~---~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQ---DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEETCHHHHHHT---TCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhHhhHHHhhhhh---HHHHHHHHHHhCCCCEEEEeC
Confidence 55555444555443 234457888999999888744
No 73
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=75.54 E-value=11 Score=35.92 Aligned_cols=53 Identities=15% Similarity=0.077 Sum_probs=35.8
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSL 237 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~sl 237 (434)
..|++.+.-...-+|+|+|.|.|. +-..|+.+ + -++|||+.+...|....+.+
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~~ml~~Ar~~~ 87 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQRMCDDLAEAL 87 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCHHHHHHHHHHH
Confidence 456666665556789999999886 44556655 2 27999999887554443333
No 74
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=73.63 E-value=8.8 Score=36.40 Aligned_cols=107 Identities=9% Similarity=0.018 Sum_probs=52.8
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHH---HcC------CceEEeeeccCccccccc
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAM---SLG------LPFDFNPLEGKIGNIIDV 256 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~---slg------vpFeF~~V~~~~e~l~~~ 256 (434)
+.-+|+|+|.|.|.- ...|+.++ .-++|||+.+.+.|....+ ..+ .....+.+..+.+++.-.
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchh
Confidence 456899999998873 33444432 3489999988763322222 111 112233333333333000
Q ss_pred cccCCC--CCceEEEecc-cccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 257 SQLGVR--PGETIVVHWM-HHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 257 ~~L~~~--~~EaLaVN~~-~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
..+.-. .=+.|+.+.. |++..+ ......+|+.+ +.|+|.-++++
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYSFES-YEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGGGGS-HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhcccCCCCEEEEEEecchhhccCC-HHHHHHHHHHHHHHhCCCcEEEE
Confidence 012111 1145555543 332122 12235667655 67899876665
No 75
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=73.39 E-value=6.2 Score=39.69 Aligned_cols=98 Identities=16% Similarity=0.278 Sum_probs=57.6
Q ss_pred EEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCCh--HHHHHHHHHcCCceEEeeeccCccccccccccCCCCCce
Q 013903 189 HIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSS--ERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGET 266 (434)
Q Consensus 189 HIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~--~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~Ea 266 (434)
+|+|+|.|.| ++-.+|.|.|. -+++||+.+. +...+.++..|+.=....+..+++++ +.. .+=++
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aGA---~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~-~lp----e~~Dv 152 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAGA---RRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV-ELP----EQVDA 152 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTTC---SEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC-CCS----SCEEE
T ss_pred EEEEeCCCcc-----HHHHHHHHhCC---CEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee-cCC----ccccE
Confidence 5889888887 33344555442 2889999763 23344555567665555566666666 221 11123
Q ss_pred EEEecccccccccCCChHHHHHHH-HhcCCCEEEE
Q 013903 267 IVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITI 300 (434)
Q Consensus 267 LaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~ 300 (434)
|+-++|-+.|.. .+....+|... |-|+|.-+++
T Consensus 153 ivsE~~~~~l~~-e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 153 IVSEWMGYGLLH-ESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp EECCCCBTTBTT-TCSHHHHHHHHHHHEEEEEEEE
T ss_pred EEeecccccccc-cchhhhHHHHHHhhCCCCceEC
Confidence 333466544433 34567888766 6788887776
No 76
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=72.90 E-value=17 Score=34.09 Aligned_cols=102 Identities=12% Similarity=-0.020 Sum_probs=55.1
Q ss_pred CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHHc---CCceEEeeeccCccccccccc
Q 013903 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMSL---GLPFDFNPLEGKIGNIIDVSQ 258 (434)
Q Consensus 185 ~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~sl---gvpFeF~~V~~~~e~l~~~~~ 258 (434)
...-+|+|+|.|.|. +...|+.+- ++..++|||+.+...+ .+.++.. .-..+|.. .+++++ ....
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~--~d~~~~-~~~~ 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKI--SSSDDF-KFLG 105 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEE--CCTTCC-GGGC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEE--cCHHhC-Cccc
Confidence 356789999999884 344444321 1356899999987633 3333333 33555543 233333 1111
Q ss_pred -cCC--CCCceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 259 -LGV--RPGETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 259 -L~~--~~~EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
..+ ..=+.|+.+. +||+ ....+|+.+ +.|+|.-.+++
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS------CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCCeeEEeHhhHHHHh------CHHHHHHHHHHhcCCCcEEEE
Confidence 011 1224555553 4443 356666554 67899877655
No 77
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=72.89 E-value=13 Score=36.29 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=61.1
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHHHHHHHcCCceEEeeeccCcccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLADFAMSLGLPFDFNPLEGKIGNI 253 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~~fA~slgvpFeF~~V~~~~e~l 253 (434)
++|++.+.-.+.-+|+|+|.|.|. +...++.+ + .-+++||+.+.- ...+.++..|+.=....+..+.+++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV 125 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHh
Confidence 566665543444589999999985 44455555 2 348999998731 2222333445421222233333333
Q ss_pred ccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEE
Q 013903 254 IDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITI 300 (434)
Q Consensus 254 ~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~ 300 (434)
. +....=++++.|++.+.+.. ......+|+.+ +-|+|.-+++
T Consensus 126 -~---~~~~~~D~Ivs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 126 -H---LPVEKVDVIISEWMGYFLLF-ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -C---CSCSCEEEEEECCCBTTBTT-TCHHHHHHHHHHHHEEEEEEEE
T ss_pred -c---CCCCcEEEEEEcCchhhccC-HHHHHHHHHHHHhhcCCCcEEE
Confidence 1 11112256666665433322 23456677765 7789998776
No 78
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=72.82 E-value=8.7 Score=33.63 Aligned_cols=93 Identities=14% Similarity=0.038 Sum_probs=55.0
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
-+|+|+|.|.|.--..|.+.+ |..++|||+.+.+ .+.+.++..|++ .+|.. .++.++ .+. ..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~-~~~----~~ 132 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQ--SRVEEF-PSE----PP 132 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE--CCTTTS-CCC----SC
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEe--cchhhC-Ccc----CC
Confidence 489999999997654444432 2458999998876 445556667775 55543 333333 110 11
Q ss_pred CceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
=+.++.|.+ .....+|+.+ +.|+|.-.++++
T Consensus 133 ~D~i~~~~~--------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 133 FDGVISRAF--------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEEEECSCS--------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred cCEEEEecc--------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 133433322 2345677665 568998877776
No 79
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=71.52 E-value=20 Score=34.66 Aligned_cols=140 Identities=14% Similarity=0.106 Sum_probs=71.4
Q ss_pred HHHHHHhcCCCccchhHhHhHHHHhhc----CCC-CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH
Q 013903 156 ALQSYNSICPLIKFSHFTANQAIFQAL----DGA-DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL 230 (434)
Q Consensus 156 A~~~f~~~sP~~kfa~~tANqAILEA~----~g~-~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL 230 (434)
+-..+.+..|-+. ...-+|.+.+.-+ .++ ..=+|+|+|.|.|.. ..+..++.+. -|..|||+|+.+...|
T Consensus 44 ~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~--~~~~~la~~~--~P~arVv~VD~sp~mL 118 (277)
T 3giw_A 44 AGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTS--PNLHEIAQSV--APESRVVYVDNDPIVL 118 (277)
T ss_dssp HHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCS--SCHHHHHHHH--CTTCEEEEEECCHHHH
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcc--cHHHHHHHHH--CCCCEEEEEeCChHHH
Confidence 4455666778873 3345788777642 222 233799999987542 1223333221 1356999999988755
Q ss_pred HHHHHHcC-C---ceEEeeeccCcccc---cc-c---cccCCCCCceEEEecccccccccCCChHHHH-HHHHhcCCCEE
Q 013903 231 ADFAMSLG-L---PFDFNPLEGKIGNI---ID-V---SQLGVRPGETIVVHWMHHCLYDITGSDLGTL-RMLTLLRPKLI 298 (434)
Q Consensus 231 ~~fA~slg-v---pFeF~~V~~~~e~l---~~-~---~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L-~~ir~L~P~vv 298 (434)
..--+.+. - ..+|.. .++.+. .. + ..|.+..--+|+.|.++|.+.+... ...+| +..+.|+|.-+
T Consensus 119 a~Ar~~l~~~~~~~~~~v~--aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~-p~~~l~~l~~~L~PGG~ 195 (277)
T 3giw_A 119 TLSQGLLASTPEGRTAYVE--ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDD-AVGIVRRLLEPLPSGSY 195 (277)
T ss_dssp HTTHHHHCCCSSSEEEEEE--CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGC-HHHHHHHHHTTSCTTCE
T ss_pred HHHHHHhccCCCCcEEEEE--ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhh-HHHHHHHHHHhCCCCcE
Confidence 43323232 1 244443 222222 00 0 1122221125666766555544211 24555 55677899755
Q ss_pred E-EEec
Q 013903 299 T-IVEQ 303 (434)
Q Consensus 299 v-~vE~ 303 (434)
+ +++-
T Consensus 196 Lvls~~ 201 (277)
T 3giw_A 196 LAMSIG 201 (277)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 4 4443
No 80
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=71.24 E-value=8 Score=35.40 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=54.0
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCC-CCCc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGV-RPGE 265 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~-~~~E 265 (434)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+.+.+....+.+. ..+|. ..++.++ .. ..=+
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~-~~~~~--~~d~~~~------~~~~~fD 112 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--FG---TVEGLELSADMLAIARRRNP-DAVLH--HGDMRDF------SLGRRFS 112 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESCHHHHHHHHHHCT-TSEEE--ECCTTTC------CCSCCEE
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECCHHHHHHHHhhCC-CCEEE--ECChHHC------CccCCcC
Confidence 3579999999985 55566665 22 79999988765544333332 33333 2223332 11 1124
Q ss_pred eEEEe--cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 266 TIVVH--WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 266 aLaVN--~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
+++.+ .++| +.+ +.....+|+.+ +.|+|.-+++++
T Consensus 113 ~v~~~~~~l~~-~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 113 AVTCMFSSIGH-LAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EEEECTTGGGG-SCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEcCchhhh-cCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 55554 3334 221 12345666655 678999888886
No 81
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=71.08 E-value=15 Score=34.86 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=58.4
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~~~ 262 (434)
-.|+|+|.|.|.- .-.|+.+ |..++|||+.+.+ ...+-++..|+. .+|.. .++.+.. +.. ..
T Consensus 125 ~~vLDlG~GsG~~----~~~la~~----~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~--~D~~~~~-~~~--f~ 191 (284)
T 1nv8_A 125 KTVADIGTGSGAI----GVSVAKF----SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRK--GEFLEPF-KEK--FA 191 (284)
T ss_dssp CEEEEESCTTSHH----HHHHHHH----SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEE--SSTTGGG-GGG--TT
T ss_pred CEEEEEeCchhHH----HHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE--Ccchhhc-ccc--cC
Confidence 4799999999953 3444444 3579999999876 334456667875 56553 3332221 111 11
Q ss_pred CCceEEEeccc-----cc----ccc------cCCChHHHHH-HH-HhcCCCEEEEEecCCC
Q 013903 263 PGETIVVHWMH-----HC----LYD------ITGSDLGTLR-ML-TLLRPKLITIVEQDLS 306 (434)
Q Consensus 263 ~~EaLaVN~~~-----h~----l~~------~~~~~~~~L~-~i-r~L~P~vvv~vE~ea~ 306 (434)
+-+.++.|--. ++ .+. .......+++ .+ +.++|.-++++|...+
T Consensus 192 ~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 192 SIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp TCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred CCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 11677777110 00 011 0011124554 55 6889998888876543
No 82
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=70.85 E-value=11 Score=33.49 Aligned_cols=103 Identities=15% Similarity=0.082 Sum_probs=56.6
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC---ceEEeeeccCccccccccccCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL---PFDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv---pFeF~~V~~~~e~l~~~~~L~~ 261 (434)
-.|+|+|.|.|.-- ..++.+. . -++|||+.+.+ ...+-++..|+ ..+|.. .+..++. + .+.-
T Consensus 55 ~~vLDlGcGtG~~~----~~~~~~~--~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~--~d~~~~~-~-~~~~ 122 (201)
T 2ift_A 55 SECLDGFAGSGSLG----FEALSRQ--A--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN--QSSLDFL-K-QPQN 122 (201)
T ss_dssp CEEEETTCTTCHHH----HHHHHTT--C--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC--SCHHHHT-T-SCCS
T ss_pred CeEEEcCCccCHHH----HHHHHcc--C--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEE--CCHHHHH-H-hhcc
Confidence 37999999988532 2223331 1 38999999876 33444556676 455542 2222220 1 0101
Q ss_pred CC-CceEEEecccccccccCCChHHHHHHHHh---cCCCEEEEEecCCCC
Q 013903 262 RP-GETIVVHWMHHCLYDITGSDLGTLRMLTL---LRPKLITIVEQDLSH 307 (434)
Q Consensus 262 ~~-~EaLaVN~~~h~l~~~~~~~~~~L~~ir~---L~P~vvv~vE~ea~~ 307 (434)
.. =++++.|..++ .+....+|+.+.. |+|.-+++++.....
T Consensus 123 ~~~fD~I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 123 QPHFDVVFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SCCEEEEEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCCCEEEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 11 24555554432 2345678888755 999877776554433
No 83
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=70.81 E-value=21 Score=31.62 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=50.3
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCCceE
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETI 267 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~EaL 267 (434)
-+|+|+|.|.|. +...|+.+ ++ ++|||+.+.+.+....+...-..+|.. .+.+++. + -..=++|
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~--~d~~~~~-~----~~~fD~v 107 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEEAISHAQGRLKDGITYIH--SRFEDAQ-L----PRRYDNI 107 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHHHHHHHHHHSCSCEEEEE--SCGGGCC-C----SSCEEEE
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHHHHHHHHHhhhCCeEEEE--ccHHHcC-c----CCcccEE
Confidence 369999999885 45556554 33 799999887655444444322334432 2232220 1 0111344
Q ss_pred EEe-cccccccccCCChHHHHHHHH--hcCCCEEEEE
Q 013903 268 VVH-WMHHCLYDITGSDLGTLRMLT--LLRPKLITIV 301 (434)
Q Consensus 268 aVN-~~~h~l~~~~~~~~~~L~~ir--~L~P~vvv~v 301 (434)
+.+ .++|+ + +...+|+.++ -|+|.-.+++
T Consensus 108 ~~~~~l~~~----~-~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 108 VLTHVLEHI----D-DPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp EEESCGGGC----S-SHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEhhHHHhh----c-CHHHHHHHHHHHhcCCCCEEEE
Confidence 444 34442 2 2467776665 7899765554
No 84
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=70.70 E-value=13 Score=34.27 Aligned_cols=101 Identities=14% Similarity=-0.000 Sum_probs=54.2
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHH---HHHHHHHcCCceEEeeeccCccccccccccCC-C
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSER---LADFAMSLGLPFDFNPLEGKIGNIIDVSQLGV-R 262 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~r---L~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~-~ 262 (434)
.-+|+|+|.|.|.--.. |+.++ ..++|||+.+.+. ..+-+...|+.-..+.+..++.++ .. .
T Consensus 65 ~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------~~~~ 130 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR------HMDL 130 (298)
T ss_dssp TCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS------CCCC
T ss_pred CCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc------ccCC
Confidence 35899999999864322 44432 3489999998763 333444455533333333333332 11 1
Q ss_pred CC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 263 PG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 263 ~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
++ ++|+.+. +||.+.. ......+|+.+ +.|+|.-.+++.
T Consensus 131 ~~~fD~v~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 131 GKEFDVISSQFSFHYAFST-SESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp SSCEEEEEEESCGGGGGSS-HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEECchhhhhcCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 22 4555553 4442222 22345666554 678998766653
No 85
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=70.55 E-value=22 Score=30.78 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=52.8
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEeeeccCccccccccccCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+.+.+ ...+.++..|+ .++|. ..+..++. ..+. .
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~--~~~~-~ 92 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLI--KDGHQNMD--KYID-C 92 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEE--CSCGGGGG--GTCC-S
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEE--ECCHHHHh--hhcc-C
Confidence 379999999984 3334444411 1239999999876 44555666676 34443 33333331 0111 1
Q ss_pred CCceEEEeccc-----ccccccCCChHHHHH-HHHhcCCCEEEEE
Q 013903 263 PGETIVVHWMH-----HCLYDITGSDLGTLR-MLTLLRPKLITIV 301 (434)
Q Consensus 263 ~~EaLaVN~~~-----h~l~~~~~~~~~~L~-~ir~L~P~vvv~v 301 (434)
.=+.++.|... +.....+.....+|+ ..+.|+|.-.+++
T Consensus 93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 22466666422 000000111234554 4577899866554
No 86
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=70.17 E-value=18 Score=34.22 Aligned_cols=104 Identities=12% Similarity=-0.004 Sum_probs=60.6
Q ss_pred HHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccC
Q 013903 176 QAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGK 249 (434)
Q Consensus 176 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~ 249 (434)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.+ ...+.++..|++ .+|.. .+
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d 175 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLSAAQADFGNRRARELRIDDHVRSRV--CN 175 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--CC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE--CC
Confidence 34666665 3445689999998884 3344544432 48999998876 445566667776 55543 22
Q ss_pred ccccccccccCCCCC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 250 IGNIIDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 250 ~e~l~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+.++ ...++ ++++.+. ++| + + ...+|+.+ +.|+|.-.+++
T Consensus 176 ~~~~------~~~~~~fD~V~~~~~l~~-~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 176 MLDT------PFDKGAVTASWNNESTMY-V-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp TTSC------CCCTTCEEEEEEESCGGG-S-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred hhcC------CCCCCCEeEEEECCchhh-C-C----HHHHHHHHHHHcCCCcEEEE
Confidence 3332 11222 3444443 333 2 2 56666554 77899765554
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=70.17 E-value=33 Score=30.44 Aligned_cols=103 Identities=13% Similarity=0.045 Sum_probs=60.7
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
..+++.+.-...-.|+|+|.|.|. +...|+.+ + .++|||+.+.+ ...+-++..|++ ++|.. .+.
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~--~d~ 113 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQ--GTA 113 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCT
T ss_pred HHHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEe--Cch
Confidence 446666665555679999999885 34455655 2 48999999877 445566777886 55543 333
Q ss_pred cccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 251 GNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
.+. .. ....=++++++.. + ... +++.+ +.|+|.-.+++.
T Consensus 114 ~~~--~~--~~~~~D~v~~~~~---~-----~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 114 PAA--LA--DLPLPEAVFIGGG---G-----SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp TGG--GT--TSCCCSEEEECSC---C-----CHH-HHHHHHHHSCTTCEEEEE
T ss_pred hhh--cc--cCCCCCEEEECCc---c-----cHH-HHHHHHHhcCCCcEEEEE
Confidence 331 01 1112245555431 1 234 66655 668998666653
No 88
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=70.08 E-value=18 Score=31.46 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=53.1
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCC--
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG-- 264 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~-- 264 (434)
.-+|+|+|.|.|. +...|+.+ | .++|||+.+.+.+. .|+...-..+|.. .++.++ ...++
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~-~a~~~~~~~~~~~--~d~~~~------~~~~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATRLVE-LARQTHPSVTFHH--GTITDL------SDSPKRW 103 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHHHHH-HHHHHCTTSEEEC--CCGGGG------GGSCCCE
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHHHHH-HHHHhCCCCeEEe--Cccccc------ccCCCCe
Confidence 4579999999986 55566665 2 28999998876444 3433322333332 222222 12222
Q ss_pred ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 265 ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 265 EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
++++.+ .++|+ . ......+|+.+ +.|+|.-.+++.
T Consensus 104 D~v~~~~~l~~~-~--~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 104 AGLLAWYSLIHM-G--PGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp EEEEEESSSTTC-C--TTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEehhhHhcC-C--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 344444 34442 1 23456777655 678997666553
No 89
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=70.01 E-value=6.7 Score=38.92 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=61.6
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccc
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDV 256 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~ 256 (434)
.|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++|||+.+.+.+ +.|+..|++..-..... - +.
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~~~~-~~a~~~~~~~~~~~~~~----~-~~ 162 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSSGVA-AKAREKGIRVRTDFFEK----A-TA 162 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCHHHH-HHHHTTTCCEECSCCSH----H-HH
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCHHHH-HHHHHcCCCcceeeech----h-hH
Confidence 45555554456789999999998 55566654 2 2899999887544 56666677654322110 0 11
Q ss_pred cccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 257 SQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 257 ~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
..+...++ ++++.+ .++|+ + ....+|+.+ +-|+|.-+++++
T Consensus 163 ~~l~~~~~~fD~I~~~~vl~h~----~-d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 163 DDVRRTEGPANVIYAANTLCHI----P-YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HHHHHHHCCEEEEEEESCGGGC----T-THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccCCCCEEEEEECChHHhc----C-CHHHHHHHHHHHcCCCeEEEEE
Confidence 11111111 344444 44553 2 356777655 678998777765
No 90
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=69.90 E-value=20 Score=35.60 Aligned_cols=116 Identities=10% Similarity=-0.045 Sum_probs=66.0
Q ss_pred hHhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc----eEEee
Q 013903 173 TANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP----FDFNP 245 (434)
Q Consensus 173 tANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp----FeF~~ 245 (434)
.....+++.+.....-+|+|+|.|.|. +...++.+. |..++|||+.+.. ...+-++..|++ ++|..
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~ 281 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMI 281 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEe
Confidence 345678888876666789999999995 344444442 3468999998876 444455556653 55543
Q ss_pred eccCccccccccccCCCCCceEEEecccccccccCCC-hHHHHHHH-HhcCCCEEEEEe
Q 013903 246 LEGKIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGS-DLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 246 V~~~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~-~~~~L~~i-r~L~P~vvv~vE 302 (434)
- +..+. +.-..=+.|+.|-.+|........ ...+++.+ +.|+|.-.+++.
T Consensus 282 ~--D~~~~-----~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 282 N--NALSG-----VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp C--STTTT-----CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c--hhhcc-----CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 2 21111 111122567777554422222222 23566655 568998777764
No 91
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=69.34 E-value=23 Score=32.55 Aligned_cols=107 Identities=16% Similarity=0.104 Sum_probs=57.2
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
+.-.|+|+|.|.|. +...|+.+.. . +||||+.+.+ ...+-++..|+.=....+..++.++. ..+.-.
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~~---~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~--~~~~~~ 118 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRTK---A-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT--DLIPKE 118 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTCC---C-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG--GTSCTT
T ss_pred CCCEEEEcCCchhH----HHHHHHHhcC---C-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh--hhhccC
Confidence 34589999999985 4456676632 2 9999998876 33444555666522333333333331 111112
Q ss_pred CCceEEEecccccc--ccc--------------CCChHHHHHHH-HhcCCCEEEEEe
Q 013903 263 PGETIVVHWMHHCL--YDI--------------TGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 263 ~~EaLaVN~~~h~l--~~~--------------~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
.=+.|+.|-..+.. ... ......+++.+ +-|+|.-.+++.
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 23577777322111 000 01234566554 668998777663
No 92
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=68.27 E-value=15 Score=31.89 Aligned_cols=96 Identities=13% Similarity=0.191 Sum_probs=51.6
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG 264 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~ 264 (434)
-+|+|+|.|.|.-...++ +. ++ .++|||+.+.+ ...+.++..+..++|.. .++.++ ...++
T Consensus 25 ~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--~d~~~~------~~~~~ 88 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISDLQLKKAENFSRENNFKLNISK--GDIRKL------PFKDE 88 (209)
T ss_dssp SEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCHHHHHHHHHHHHHHTCCCCEEE--CCTTSC------CSCTT
T ss_pred CEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCHHHHHHHHHHHHhcCCceEEEE--CchhhC------CCCCC
Confidence 479999998886544333 22 22 38999999876 33334444454444432 222222 22222
Q ss_pred --ceEEEe-cccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 265 --ETIVVH-WMHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 265 --EaLaVN-~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
+.++.+ .++|+ . ......+|+. .+.|+|.-++++.
T Consensus 89 ~fD~v~~~~~l~~~-~--~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 89 SMSFVYSYGTIFHM-R--KNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp CEEEEEECSCGGGS-C--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEcChHHhC-C--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 344444 34443 1 1234566654 4778998666553
No 93
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=67.74 E-value=59 Score=30.09 Aligned_cols=103 Identities=19% Similarity=0.209 Sum_probs=57.4
Q ss_pred CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCC
Q 013903 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 185 ~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~ 261 (434)
.+.-.|+|+|.|.|. +...|+.+- |+..++|||+.+.. ...+.++..+...+|.. .++.++ .. .
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~--~d~~~~-~~---~- 87 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGETLLAEARELFRLLPYDSEFLE--GDATEI-EL---N- 87 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEE--SCTTTC-CC---S-
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEE--cchhhc-Cc---C-
Confidence 356789999999984 445555542 23478999998876 33444444555555543 333333 11 0
Q ss_pred CCCceEEEecccccccccCCChHHHHH-HHHhcCCCEEEEE-ecC
Q 013903 262 RPGETIVVHWMHHCLYDITGSDLGTLR-MLTLLRPKLITIV-EQD 304 (434)
Q Consensus 262 ~~~EaLaVN~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~v-E~e 304 (434)
..=+.++.+.+++.+ + +...+|+ ..+.|+|.-.+++ |.+
T Consensus 88 ~~fD~v~~~~~l~~~---~-~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAFLLHM---T-TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESCGGGC---S-SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECChhhcC---C-CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 112455555433222 2 2356665 4577899876654 443
No 94
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=67.59 E-value=17 Score=33.99 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=58.7
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcC----CceEEeee
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLG----LPFDFNPL 246 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slg----vpFeF~~V 246 (434)
.-..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+.+.. ...+-+...| ...+|..
T Consensus 71 ~~~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~- 139 (299)
T 3g2m_A 71 EAREFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQ- 139 (299)
T ss_dssp HHHHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEE-
T ss_pred HHHHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHHHHhhcccccccceEEEe-
Confidence 33455566554434 89999999997 44555555 2 47999999876 3333344444 2345543
Q ss_pred ccCccccccccccCCCCC--ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 247 EGKIGNIIDVSQLGVRPG--ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 247 ~~~~e~l~~~~~L~~~~~--EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
.++.++ .. ++ +.|++. ..+|.+. +.....+|+.+ +.|+|.-.+++.
T Consensus 140 -~d~~~~------~~-~~~fD~v~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 140 -GDMSAF------AL-DKRFGTVVISSGSINELD--EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp -CBTTBC------CC-SCCEEEEEECHHHHTTSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CchhcC------Cc-CCCcCEEEECCcccccCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 223333 12 22 333333 2223221 12246677655 678998777664
No 95
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=67.49 E-value=29 Score=31.09 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=58.5
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcC--CceEEeeeccCcccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLG--LPFDFNPLEGKIGNI 253 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slg--vpFeF~~V~~~~e~l 253 (434)
..+++.+.....-+|+|+|.|.|.-- ..|+.+. ..++|||+.+...+....+.+. -..+|. ..++.++
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~----~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~~d~~~~ 152 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRIT----KNLLTKL----YATTDLLEPVKHMLEEAKRELAGMPVGKFI--LASMETA 152 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHH----HHTHHHH----CSEEEEEESCHHHHHHHHHHTTTSSEEEEE--ESCGGGC
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHH----HHHHHhh----cCEEEEEeCCHHHHHHHHHHhccCCceEEE--EccHHHC
Confidence 56677776556779999999998733 3333331 2379999988764433333332 233443 2223332
Q ss_pred ccccccCCCCC--ceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 254 IDVSQLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 254 ~~~~~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
...++ +.++.+. ++|+ .+ .....+|+. .+.|+|.-.+++.
T Consensus 153 ------~~~~~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 153 ------TLPPNTYDLIVIQWTAIYL-TD--ADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp ------CCCSSCEEEEEEESCGGGS-CH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCCCCeEEEEEcchhhhC-CH--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 22222 4454443 3442 11 124566654 4778998666553
No 96
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=67.24 E-value=5.6 Score=33.46 Aligned_cols=100 Identities=9% Similarity=-0.088 Sum_probs=54.3
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCC--C
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGV--R 262 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~--~ 262 (434)
-+|+|+|.|.|. +...|+.+ ++ . +|||+.+.+ ...+-++..|+..+|. ..++.+.. + .+.- .
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~--~~d~~~~~-~-~~~~~~~ 109 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKDPEAVRLLKENVRRTGLGARVV--ALPVEVFL-P-EAKAQGE 109 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCCHHHHHHHHHHHHHHTCCCEEE--CSCHHHHH-H-HHHHTTC
T ss_pred CeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCCHHHHHHHHHHHHHcCCceEEE--eccHHHHH-H-hhhccCC
Confidence 479999999995 34445554 33 2 999999876 3344455566644443 22222210 0 0100 0
Q ss_pred CCceEEEecccccccccCCChHHHHHHH---HhcCCCEEEEEecCCC
Q 013903 263 PGETIVVHWMHHCLYDITGSDLGTLRML---TLLRPKLITIVEQDLS 306 (434)
Q Consensus 263 ~~EaLaVN~~~h~l~~~~~~~~~~L~~i---r~L~P~vvv~vE~ea~ 306 (434)
.=+.++.|...| .....+++.+ +-|+|.-+++++....
T Consensus 110 ~~D~i~~~~~~~------~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 110 RFTVAFMAPPYA------MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CEEEEEECCCTT------SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ceEEEEECCCCc------hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 124566664433 1234455555 5689998877765443
No 97
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=67.19 E-value=6.2 Score=37.38 Aligned_cols=100 Identities=10% Similarity=0.005 Sum_probs=55.4
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~~ 261 (434)
.-+|+|+|.|.|. +...|+.+ ..|..++|||+.+.. ...+.++..|++ .+|.. .++.++ . +.
T Consensus 119 ~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~-~---~~- 185 (305)
T 3ocj_A 119 GCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHR--QDAWKL-D---TR- 185 (305)
T ss_dssp TCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE--CCGGGC-C---CC-
T ss_pred CCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CchhcC-C---cc-
Confidence 4579999999884 33444322 235679999999876 444555566665 55543 333333 1 11
Q ss_pred CCCceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 262 RPGETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 262 ~~~EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
..=++++.|. ++| +.+ +.....+|+.+ +.|+|.-.+++
T Consensus 186 ~~fD~v~~~~~~~~-~~~-~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 186 EGYDLLTSNGLNIY-EPD-DARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp SCEEEEECCSSGGG-CCC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeEEEEECChhhh-cCC-HHHHHHHHHHHHHhcCCCeEEEE
Confidence 1223454443 333 222 11122466655 67899887776
No 98
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=66.76 E-value=21 Score=36.82 Aligned_cols=114 Identities=10% Similarity=0.074 Sum_probs=63.8
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH--HHH--------HHHHHcCCc-eEE
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE--RLA--------DFAMSLGLP-FDF 243 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~--rL~--------~fA~slgvp-FeF 243 (434)
-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+-+.+ .++ +.++..|+. -.+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 3556666654455679999999885 3333443332 238999998864 221 234566762 234
Q ss_pred eeeccCccccccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEE
Q 013903 244 NPLEGKIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIV 301 (434)
Q Consensus 244 ~~V~~~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~v 301 (434)
..+..++.++ .... .+..-.+|++|...+ . ++....+....+.|+|.-.+++
T Consensus 235 efi~GD~~~l-p~~d-~~~~aDVVf~Nn~~F---~-pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 235 TLERGDFLSE-EWRE-RIANTSVIFVNNFAF---G-PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EEEECCTTSH-HHHH-HHHTCSEEEECCTTC---C-HHHHHHHHHHHTTSCTTCEEEE
T ss_pred EEEECcccCC-cccc-ccCCccEEEEccccc---C-chHHHHHHHHHHcCCCCcEEEE
Confidence 4444444443 1110 112335777885432 1 2223455567789999887776
No 99
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=66.61 E-value=11 Score=34.60 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=59.3
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCcccccc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIID 255 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~ 255 (434)
+.|++.+.-.+.-+|+|+|.|.|. +...|+. |..++|||+.+...+. .|+... ..+|.. .+.+++ .
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~~~~-~a~~~~-~~~~~~--~d~~~~-~ 89 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSIVMRQ-QAVVHP-QVEWFT--GYAENL-A 89 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCHHHHH-SSCCCT-TEEEEC--CCTTSC-C
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCHHHHH-HHHhcc-CCEEEE--CchhhC-C
Confidence 445555554556689999999987 3344443 2359999998875443 333222 344432 223332 1
Q ss_pred ccccCCCCCceEEEec-ccccccccCCChHHHHHH-HHhcCCC-EEEEEecCCCCCC
Q 013903 256 VSQLGVRPGETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPK-LITIVEQDLSHGG 309 (434)
Q Consensus 256 ~~~L~~~~~EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~-vvv~vE~ea~~n~ 309 (434)
+.-..=+.++.+. ++|. .....+|+. .+.|+ . .+++++.+.++..
T Consensus 90 ---~~~~~fD~v~~~~~l~~~-----~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~ 137 (261)
T 3ege_A 90 ---LPDKSVDGVISILAIHHF-----SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQ 137 (261)
T ss_dssp ---SCTTCBSEEEEESCGGGC-----SSHHHHHHHHHHHBC-SSCEEEEEECGGGCC
T ss_pred ---CCCCCEeEEEEcchHhhc-----cCHHHHHHHHHHHhC-CcEEEEEEcCCchhH
Confidence 1111224555554 4442 234556654 46677 6 3666666544433
No 100
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=66.57 E-value=9.1 Score=34.58 Aligned_cols=95 Identities=9% Similarity=0.223 Sum_probs=49.2
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCCce
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGET 266 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~Ea 266 (434)
.-+|+|+|.|.|. +...|+.+ | .++|||+.+.+.+. .|+.. ++|.. .+..+.. ..+.-..=+.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~~~-~a~~~---~~~~~--~d~~~~~--~~~~~~~fD~ 104 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINEDMIK-FCEGK---FNVVK--SDAIEYL--KSLPDKYLDG 104 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCHHHHH-HHHTT---SEEEC--SCHHHHH--HTSCTTCBSE
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCHHHHH-HHHhh---cceee--ccHHHHh--hhcCCCCeeE
Confidence 3579999998886 34555554 2 26899998876444 34433 33332 2222210 0111111145
Q ss_pred EEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 267 IVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 267 LaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
|+.+ .++|+ . ......+|+.+ +.|+|.-.+++
T Consensus 105 i~~~~~l~~~-~--~~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 105 VMISHFVEHL-D--PERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp EEEESCGGGS-C--GGGHHHHHHHHHHHBCTTCCEEE
T ss_pred EEECCchhhC-C--cHHHHHHHHHHHHHcCCCcEEEE
Confidence 5444 34443 1 12346677655 77899755544
No 101
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=66.05 E-value=33 Score=29.87 Aligned_cols=107 Identities=8% Similarity=0.001 Sum_probs=61.0
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCcc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIG 251 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e 251 (434)
..+++.+.-.+.-+|+|+|.|.|. +...|+.+. |..++|||+.+.+ ...+.++..|++ ++|. ..+..
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~--~~d~~ 100 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALERNPQYLGFIRDNLKKFVARNVTLV--EAFAP 100 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEE--ECCTT
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE--eCChh
Confidence 445666665566789999999886 233444431 3569999999876 444555556763 4443 22222
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
+... ....=++++++...+ ....+|+.+ +.|+|.-.+++.
T Consensus 101 ~~~~----~~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 101 EGLD----DLPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp TTCT----TSCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEE
T ss_pred hhhh----cCCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEE
Confidence 2101 112224555553322 345666654 668998777763
No 102
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=65.71 E-value=16 Score=35.34 Aligned_cols=99 Identities=12% Similarity=0.196 Sum_probs=52.3
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCCc
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGE 265 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~E 265 (434)
+.-+|+|+|.|.|. +...|+.+. |.+++|+++. .+ ..+.|+... ..+|.. .++.+ .+. .-+
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~-~~~~a~~~~-~v~~~~--~d~~~-----~~p--~~D 248 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR-PQ-VVENLSGSN-NLTYVG--GDMFT-----SIP--NAD 248 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-HH-HHTTCCCBT-TEEEEE--CCTTT-----CCC--CCS
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC-HH-HHhhcccCC-CcEEEe--ccccC-----CCC--Ccc
Confidence 34689999999995 455555542 3568999998 43 333444322 144432 22111 111 135
Q ss_pred eEEEecccccccccCCChHHHHHHH-HhcCC----CEEEEEecCC
Q 013903 266 TIVVHWMHHCLYDITGSDLGTLRML-TLLRP----KLITIVEQDL 305 (434)
Q Consensus 266 aLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P----~vvv~vE~ea 305 (434)
+++.+..+|.+.+ .....+|+.+ +.|+| ..++++|...
T Consensus 249 ~v~~~~~lh~~~d--~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 249 AVLLKYILHNWTD--KDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp EEEEESCGGGSCH--HHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred EEEeehhhccCCH--HHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 5655543332222 1123667655 66899 4566666543
No 103
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=65.43 E-value=28 Score=34.19 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=53.6
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHH-------HHHHc-C----CceEEeeeccCcccc
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLAD-------FAMSL-G----LPFDFNPLEGKIGNI 253 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~-------fA~sl-g----vpFeF~~V~~~~e~l 253 (434)
+.-+|+|+|.|.|.-=..|.+.+ .|..++|||+.+.+.|.. .+..+ | -..+|.. .+++++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~--~d~~~l 154 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK--GFIENL 154 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE--SCTTCG
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE--ccHHHh
Confidence 34589999999986333333332 123599999998762222 22221 4 3455543 223332
Q ss_pred ccccccCCCCC--ceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 254 IDVSQLGVRPG--ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 254 ~~~~~L~~~~~--EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.+.....+.++ +.|+.|.++|.+. ....+|+.+ +-|+|.-.+++
T Consensus 155 ~~~~~~~~~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 155 ATAEPEGVPDSSVDIVISNCVCNLST----NKLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp GGCBSCCCCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcccCCCCCCCEEEEEEccchhcCC----CHHHHHHHHHHHcCCCCEEEE
Confidence 10100022222 5666665544332 245666554 77899866554
No 104
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=64.86 E-value=16 Score=34.21 Aligned_cols=101 Identities=11% Similarity=0.085 Sum_probs=53.2
Q ss_pred EEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCC--ce
Q 013903 189 HIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG--ET 266 (434)
Q Consensus 189 HIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~--Ea 266 (434)
.|+|+|.|.|. +...|+.+- -++|||+.+...|.. |+.. -.++|.. ...+++ .+.++ +.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~~-----~~v~gvD~s~~ml~~-a~~~-~~v~~~~--~~~e~~------~~~~~sfD~ 102 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEFF-----ERVHAVDPGEAQIRQ-ALRH-PRVTYAV--APAEDT------GLPPASVDV 102 (257)
T ss_dssp EEEEESCTTTT----THHHHHTTC-----SEEEEEESCHHHHHT-CCCC-TTEEEEE--CCTTCC------CCCSSCEEE
T ss_pred CEEEEcCCCCH----HHHHHHHhC-----CEEEEEeCcHHhhhh-hhhc-CCceeeh--hhhhhh------cccCCcccE
Confidence 58999999985 344555542 279999998875543 3332 1233332 223333 23333 34
Q ss_pred EEEecccccccccCCChHHHHHH-HHhcCCCEEEEE-ecCCCCCCChhH
Q 013903 267 IVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIV-EQDLSHGGSFLG 313 (434)
Q Consensus 267 LaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v-E~ea~~n~~F~~ 313 (434)
|+.+..+|.. +.+.+|+. -|-|+|.-++++ ........|.++
T Consensus 103 v~~~~~~h~~-----~~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~ 146 (257)
T 4hg2_A 103 AIAAQAMHWF-----DLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVD 146 (257)
T ss_dssp EEECSCCTTC-----CHHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHH
T ss_pred EEEeeehhHh-----hHHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHH
Confidence 4444333322 24556654 477899876644 443333334333
No 105
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=64.84 E-value=6.8 Score=35.40 Aligned_cols=104 Identities=15% Similarity=0.005 Sum_probs=53.9
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCC-ceEEeeeccCccccccccccCC-CCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGL-PFDFNPLEGKIGNIIDVSQLGV-RPG 264 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgv-pFeF~~V~~~~e~l~~~~~L~~-~~~ 264 (434)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+...+....+.++. ..+|.. .++.++.....+.- .+-
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKSALEIAAKENTAANISYRL--LDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHHHHHHHHHHSCCTTEEEEE--CCTTCHHHHHHHHHHHCS
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHHHHHHHHHhCcccCceEEE--CcccccccccccccccCc
Confidence 3469999999885 44445543 22 899999987755444444332 344432 22333200000100 113
Q ss_pred ceEEEecccccccccCCChHHHHHHH-HhcCCCEE-EEEec
Q 013903 265 ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLI-TIVEQ 303 (434)
Q Consensus 265 EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vv-v~vE~ 303 (434)
.+++.+.++|.+. ......+|+.+ +.|+|.-. ++++.
T Consensus 126 d~v~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 126 ANIYMRTGFHHIP--VEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp CEEEEESSSTTSC--GGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cEEEEcchhhcCC--HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4566565444332 12356666654 67899764 55654
No 106
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=62.54 E-value=30 Score=33.14 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=50.8
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHH---HHHHcCCc-------eEEeeec--cCc--cc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLAD---FAMSLGLP-------FDFNPLE--GKI--GN 252 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~---fA~slgvp-------FeF~~V~--~~~--e~ 252 (434)
.-+|+|+|.|.|.- +..++.+.+ -++|||+.+.+.|.. -+...++. ++|.... ... ++
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~ 120 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSS 120 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHH
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhh
Confidence 45899999999852 222333322 379999999873322 23334542 4554321 110 11
Q ss_pred cccccccCCCCC--ceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPG--ETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~--EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+ ++. ..++ ++|.....+|.+.+.. ....+|+.+ +.|+|.-++++
T Consensus 121 l--~~~--~~~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 121 V--REV--FYFGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp H--HTT--CCSSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEE
T ss_pred h--hcc--ccCCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence 1 000 1122 2333333333222222 346777655 77999877765
No 107
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=62.47 E-value=25 Score=30.77 Aligned_cols=95 Identities=16% Similarity=0.232 Sum_probs=54.0
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCCce
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGET 266 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~Ea 266 (434)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+.+.+....+.+++.|.-. .+.++ .+ -..=+.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~----d~~~~-~~----~~~fD~ 105 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDGSPELAAEASRRLGRPVRTM----LFHQL-DA----IDAYDA 105 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHHHHTSCCEEC----CGGGC-CC----CSCEEE
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCCHHHHHHHHHhcCCceEEe----eeccC-CC----CCcEEE
Confidence 3479999999886 45566655 2 389999998875555545556554322 22222 10 111134
Q ss_pred EEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 267 IVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 267 LaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
++.+ .++|+ . ......+|+.+ +.|+|.-++++.
T Consensus 106 v~~~~~l~~~-~--~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 106 VWAHACLLHV-P--RDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp EEECSCGGGS-C--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecCchhhc-C--HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4444 34442 1 12345666655 678998777664
No 108
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=62.36 E-value=59 Score=32.82 Aligned_cols=92 Identities=18% Similarity=0.156 Sum_probs=57.5
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG 264 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~ 264 (434)
-.|+|+|.|.|.- ...||.+ + -+++||+.+.+ ...+-|+..|++.+|. ..+..++. +. .=
T Consensus 292 ~~VLDlgcG~G~~----sl~la~~-~----~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~--~~d~~~~~-~~-----~f 354 (425)
T 2jjq_A 292 EKILDMYSGVGTF----GIYLAKR-G----FNVKGFDSNEFAIEMARRNVEINNVDAEFE--VASDREVS-VK-----GF 354 (425)
T ss_dssp SEEEEETCTTTHH----HHHHHHT-T----CEEEEEESCHHHHHHHHHHHHHHTCCEEEE--ECCTTTCC-CT-----TC
T ss_pred CEEEEeeccchHH----HHHHHHc-C----CEEEEEECCHHHHHHHHHHHHHcCCcEEEE--ECChHHcC-cc-----CC
Confidence 3689999998863 3345554 2 28999998876 3444456667774443 34444431 11 22
Q ss_pred ceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEe
Q 013903 265 ETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVE 302 (434)
Q Consensus 265 EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE 302 (434)
+++++|-.. .+....+++.++.|+|+-++.+.
T Consensus 355 D~Vv~dPPr------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 355 DTVIVDPPR------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp SEEEECCCT------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred CEEEEcCCc------cchHHHHHHHHHhcCCCcEEEEE
Confidence 466665221 23345789999999999888874
No 109
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=62.21 E-value=32 Score=29.96 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=55.9
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCcc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIG 251 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e 251 (434)
..+++.+.-.+.-+|+|+|.|.|..= ..|+.+ + -++|+|+.+.+ ...+.++..|++ .+|. ..+..
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~-~----~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~--~~d~~ 135 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQT----AILAHL-V----QHVCSVERIKGLQWQARRRLKNLDLHNVSTR--HGDGW 135 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEEESCHHHHHHHHHHHHHTTCCSEEEE--ESCGG
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh-C----CEEEEEecCHHHHHHHHHHHHHcCCCceEEE--ECCcc
Confidence 34456665556678999999988643 333433 2 48999999876 334445556765 3433 22222
Q ss_pred ccccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEe
Q 013903 252 NIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVE 302 (434)
Q Consensus 252 ~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE 302 (434)
+.. + .-.+=+.++++...+.+.+ ...+.|+|.-.+++.
T Consensus 136 ~~~-~---~~~~~D~i~~~~~~~~~~~---------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 136 QGW-Q---ARAPFDAIIVTAAPPEIPT---------ALMTQLDEGGILVLP 173 (210)
T ss_dssp GCC-G---GGCCEEEEEESSBCSSCCT---------HHHHTEEEEEEEEEE
T ss_pred cCC-c---cCCCccEEEEccchhhhhH---------HHHHhcccCcEEEEE
Confidence 220 1 1112256666643222221 356778887655543
No 110
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=61.92 E-value=44 Score=29.59 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=50.9
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHc-CCceEEeeeccCccccccccccCCCCC-
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSL-GLPFDFNPLEGKIGNIIDVSQLGVRPG- 264 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~sl-gvpFeF~~V~~~~e~l~~~~~L~~~~~- 264 (434)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+.+.+....+.. +...+|.. .++.++ ...++
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~~------~~~~~~ 116 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDISEVMIQKGKERGEGPDLSFIK--GDLSSL------PFENEQ 116 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHHHHHHHTTTCBTTEEEEE--CBTTBC------SSCTTC
T ss_pred CCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECCHHHHHHHHhhcccCCceEEE--cchhcC------CCCCCC
Confidence 3489999999985 45556655 2 38999998876443333321 23344432 222222 22222
Q ss_pred -ceEEEe-cccccccccCCChHHHHH-HHHhcCCCEEEEEe
Q 013903 265 -ETIVVH-WMHHCLYDITGSDLGTLR-MLTLLRPKLITIVE 302 (434)
Q Consensus 265 -EaLaVN-~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~vE 302 (434)
++++.+ .++|. .....+|+ ..+.|+|.-++++.
T Consensus 117 fD~v~~~~~l~~~-----~~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 117 FEAIMAINSLEWT-----EEPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp EEEEEEESCTTSS-----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEEcChHhhc-----cCHHHHHHHHHHHhCCCeEEEEE
Confidence 344433 34442 23445555 45778997766554
No 111
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=61.14 E-value=35 Score=29.60 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=57.1
Q ss_pred hHHHHhhcCC-CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcC-CceEEeeeccCccc
Q 013903 175 NQAIFQALDG-ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLG-LPFDFNPLEGKIGN 252 (434)
Q Consensus 175 NqAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slg-vpFeF~~V~~~~e~ 252 (434)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ + .++|||+.+.+.+ +.|+..| -..+|.. .++.+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~s~~~~-~~a~~~~~~~~~~~~--~d~~~ 101 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL-A----DRVTALDGSAEMI-AEAGRHGLDNVEFRQ--QDLFD 101 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH-S----SEEEEEESCHHHH-HHHGGGCCTTEEEEE--CCTTS
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc-C----CeEEEEeCCHHHH-HHHHhcCCCCeEEEe--ccccc
Confidence 4456666652 233499999999986 44445544 2 3899999887543 3444455 3344443 22222
Q ss_pred cccccccCCCCCceEEEec-ccccccccCCC-hHHHHHHH-HhcCCCEEEEE
Q 013903 253 IIDVSQLGVRPGETIVVHW-MHHCLYDITGS-DLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 253 l~~~~~L~~~~~EaLaVN~-~~h~l~~~~~~-~~~~L~~i-r~L~P~vvv~v 301 (434)
+ +.-..=++++.+. ++|. +.+ ...+|+.+ +.|+|.-.+++
T Consensus 102 ~-----~~~~~~D~v~~~~~l~~~----~~~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 102 W-----TPDRQWDAVFFAHWLAHV----PDDRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp C-----CCSSCEEEEEEESCGGGS----CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred C-----CCCCceeEEEEechhhcC----CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 2 1111113455553 3442 222 35666554 77899755544
No 112
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=60.88 E-value=13 Score=34.44 Aligned_cols=98 Identities=13% Similarity=0.056 Sum_probs=56.0
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~ 261 (434)
..-+|+|+|.|.|.--..|-+. . |..+||+|+.+.+ .+.+-++.+|+. .+| +..+.+++. .....-
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~--~~~d~~~~~-~~~~~~ 149 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDATRKKVAFVERAIEVLGLKGARA--LWGRAEVLA-REAGHR 149 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEE--EECCHHHHT-TSTTTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECCHHHHHHHHHHHHHhCCCceEE--EECcHHHhh-cccccC
Confidence 4458999999999753333332 1 3579999999876 455666777875 444 334444441 110000
Q ss_pred CCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 262 RPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 262 ~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
..=++++.+.+ .+...++..+ +-|+|.-..++
T Consensus 150 ~~fD~I~s~a~--------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 150 EAYARAVARAV--------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TCEEEEEEESS--------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCceEEEECCc--------CCHHHHHHHHHHHcCCCeEEEE
Confidence 11134444322 2346677655 67788876654
No 113
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=60.66 E-value=14 Score=32.84 Aligned_cols=99 Identities=15% Similarity=0.054 Sum_probs=55.4
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC-ceEEeeeccCccccccccccCCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL-PFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv-pFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
-+|+|+|.|.|.--..+ +.+ + . -+||||+.+.+ ...+-++..|+ ..+|. ..+..+.. +. .-..
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~-~-~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~--~~D~~~~~-~~--~~~~ 122 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSR-Y-A--AGATLIEMDRAVSQQLIKNLATLKAGNARVV--NSNAMSFL-AQ--KGTP 122 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHT-T-C--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEE--CSCHHHHH-SS--CCCC
T ss_pred CeEEEeCCCcCHHHHHH----Hhc-C-C--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEE--ECCHHHHH-hh--cCCC
Confidence 47999999988643322 233 1 1 28999999876 34445566676 44444 22222210 10 0011
Q ss_pred CceEEEecccccccccCCChHHHHHHHHh---cCCCEEEEEecC
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRMLTL---LRPKLITIVEQD 304 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~ir~---L~P~vvv~vE~e 304 (434)
=+.|++|...| .+....+++.+.. |+|.-+++++..
T Consensus 123 fD~V~~~~p~~-----~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 123 HNIVFVDPPFR-----RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp EEEEEECCSSS-----TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCEEEECCCCC-----CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 14566664422 2345677888776 999877776543
No 114
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=59.37 E-value=34 Score=31.06 Aligned_cols=102 Identities=16% Similarity=0.056 Sum_probs=53.7
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHH---H----HcCCc-eEEeeeccCcccccccc
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFA---M----SLGLP-FDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA---~----slgvp-FeF~~V~~~~e~l~~~~ 257 (434)
..=+|+|+|.|.|. +...|+.+. |..++|||+.+.+.+.+.| + ..|++ .+|. ..+.+++ +.
T Consensus 24 ~~~~vLDiGCG~G~----~~~~la~~~---~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~--~~d~~~l--~~ 92 (225)
T 3p2e_A 24 FDRVHIDLGTGDGR----NIYKLAIND---QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFV--IAAAESL--PF 92 (225)
T ss_dssp CSEEEEEETCTTSH----HHHHHHHTC---TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEE--CCBTTBC--CG
T ss_pred CCCEEEEEeccCcH----HHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEE--EcCHHHh--hh
Confidence 34479999999884 555666542 4589999999966554444 3 34554 5553 2333343 11
Q ss_pred ccCCCCCceEEE--eccc-ccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 258 QLGVRPGETIVV--HWMH-HCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 258 ~L~~~~~EaLaV--N~~~-h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
.+ .+-+..| |... +...........+|+. -|-|+|.-.+++
T Consensus 93 ~~---~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 EL---KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp GG---TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred hc---cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 11 1323333 3211 0001111122445554 477899877766
No 115
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=59.31 E-value=21 Score=31.13 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=40.1
Q ss_pred hHhHHHHhhcC--CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEe
Q 013903 173 TANQAIFQALD--GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFN 244 (434)
Q Consensus 173 tANqAILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~ 244 (434)
...+.+++.+. -.+.-.|+|+|.|.|. +...|+.++ ..++|||+.+.+ ...+.++..|++ ++|.
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~ 114 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDISDESMTAAEENAALNGIYDIALQ 114 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 34455555554 2345689999999984 333466542 358999998876 444455556765 5554
No 116
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=59.07 E-value=18 Score=32.61 Aligned_cols=101 Identities=10% Similarity=-0.011 Sum_probs=53.0
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHH---HHHHHHHcCCceEEeeeccCccccccccccCCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSER---LADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~r---L~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
..-+|+|+|.|.|. +...|+.+. +. ++|||+.+.+. ..+.++..|...+|. ..+++++. . .+.
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~--~~d~~~~~--~--~~~ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL--KGLWEDVA--P--TLP 125 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---EE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE--ESCHHHHG--G--GSC
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---CC-eEEEEcCCHHHHHHHHHHHHhcCCCeEEE--ecCHHHhh--c--ccC
Confidence 45689999999984 334444432 22 89999998873 334444445444443 33333321 0 122
Q ss_pred CC--ceEEE-eccccccccc-CCChHHHHH-HHHhcCCCEEEEE
Q 013903 263 PG--ETIVV-HWMHHCLYDI-TGSDLGTLR-MLTLLRPKLITIV 301 (434)
Q Consensus 263 ~~--EaLaV-N~~~h~l~~~-~~~~~~~L~-~ir~L~P~vvv~v 301 (434)
++ ++|+. ++.++ .... ....+.+|+ ..+-|+|.-+++.
T Consensus 126 ~~~fD~V~~d~~~~~-~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 126 DGHFDGILYDTYPLS-EETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp TTCEEEEEECCCCCB-GGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred CCceEEEEECCcccc-hhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 22 45555 22211 1111 112345565 4577899987764
No 117
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=59.05 E-value=56 Score=29.17 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=51.7
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHH---c-CCceEEeeeccCccccccccccCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMS---L-GLPFDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~s---l-gvpFeF~~V~~~~e~l~~~~~L~~ 261 (434)
+.-.|+|+|.|.|. +...|+.+. ..++|||+.+...+....+. . +...+|.. ..+.++ ..
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--~d~~~~------~~ 142 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFC--CGLQDF------TP 142 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEE--CCGGGC------CC
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEE--cChhhc------CC
Confidence 35689999999886 444555543 23899999887644332222 2 12244432 223333 12
Q ss_pred CCC--ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 262 RPG--ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 262 ~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
.++ ++++.+. ++|+ .+ .....+|+.+ +.|+|.-.+++
T Consensus 143 ~~~~fD~v~~~~~l~~~-~~--~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 143 EPDSYDVIWIQWVIGHL-TD--QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp CSSCEEEEEEESCGGGS-CH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEEEEcchhhhC-CH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 222 4555553 3442 11 1134666554 67899866654
No 118
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=58.50 E-value=9.6 Score=37.04 Aligned_cols=114 Identities=11% Similarity=-0.025 Sum_probs=64.5
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKI 250 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~ 250 (434)
..+.|++.+.....-+|+|+|.|.|.-- ..|+.+ + |..++|+|+.+.. ...+-++..|+..+|. ..+.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~----~~la~~--~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~~d~ 254 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLS----VAFARH--S-PKIRLTLCDVSAPAVEASRATLAANGVEGEVF--ASNV 254 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHH----HHHHHH--C-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEE--ECST
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHH----HHHHHH--C-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEE--Eccc
Confidence 4678888885433447999999988743 334433 1 4468999998876 3334445567776663 2222
Q ss_pred cccccccccCCCCCceEEEeccccccc-ccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 251 GNIIDVSQLGVRPGETIVVHWMHHCLY-DITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN~~~h~l~-~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
.+. .-..=+.++.|..+|... ........+|+.+ +.|+|.-.+++.
T Consensus 255 ~~~------~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 255 FSE------VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp TTT------CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccc------ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 111 111225666675544211 1112245666654 678998777654
No 119
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=58.14 E-value=58 Score=32.69 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=59.8
Q ss_pred HhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccc
Q 013903 179 FQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNII 254 (434)
Q Consensus 179 LEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~ 254 (434)
++.+.....-+|+|+|.|.|.-- ..||.+ .-+++||+.+.+ ...+-|+..|++ .+|.. .++.+..
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~----~~la~~-----~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~--~d~~~~l 347 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFT----LPLATQ-----AASVVGVEGVPALVEKGQQNARLNGLQNVTFYH--ENLEEDV 347 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTH----HHHHTT-----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--CCTTSCC
T ss_pred HHhhcCCCCCEEEECCCCCCHHH----HHHHhh-----CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEE--CCHHHHh
Confidence 34443333347999999998743 345554 248999999876 334445667774 55543 3333321
Q ss_pred cccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEE
Q 013903 255 DVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIV 301 (434)
Q Consensus 255 ~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~v 301 (434)
....+.-..=+++++|-.. .+ ...+++.+..++|+-++.+
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr------~g-~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPAR------AG-AAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp SSSGGGTTCCSEEEECCCT------TC-CHHHHHHHHHHCCSEEEEE
T ss_pred hhhhhhcCCCCEEEECCCC------cc-HHHHHHHHHhcCCCeEEEE
Confidence 0000111122566665221 12 2468899999999998876
No 120
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=58.08 E-value=22 Score=32.25 Aligned_cols=107 Identities=8% Similarity=0.052 Sum_probs=57.4
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~ 261 (434)
+.-.|+|+|.|.|.-. ..||.+. |..+++||+.+.+ ...+-++..|++ ++|. ..+..++. +.. +
T Consensus 34 ~~~~vLDiGcG~G~~~----~~lA~~~---p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~--~~Da~~~l-~~~--~ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASL----VAMAKDR---PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVM--CHDAVEVL-HKM--I 101 (218)
T ss_dssp CCCEEEEESCTTCHHH----HHHHHHC---TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEE--CSCHHHHH-HHH--S
T ss_pred CCCeEEEEeeeChHHH----HHHHHHC---CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEE--ECCHHHHH-HHH--c
Confidence 4457999999998643 3444432 3468999999887 445556667764 4443 33322220 101 1
Q ss_pred CCC--ceEEEecc--cccc-cc-cCCChHHHHHHH-HhcCCCEEEEEecC
Q 013903 262 RPG--ETIVVHWM--HHCL-YD-ITGSDLGTLRML-TLLRPKLITIVEQD 304 (434)
Q Consensus 262 ~~~--EaLaVN~~--~h~l-~~-~~~~~~~~L~~i-r~L~P~vvv~vE~e 304 (434)
.++ +.+.+|+. ++.. +. ..--...||+.+ +.|+|.-++++.-+
T Consensus 102 ~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 102 PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 222 35555532 1100 00 000013588776 56999998887543
No 121
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=57.43 E-value=39 Score=30.10 Aligned_cols=47 Identities=15% Similarity=0.045 Sum_probs=30.8
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEe
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFN 244 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~ 244 (434)
-+|+|+|.|.|. +...|+.+ + .++|||+.+...+.. |+...-..+|.
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~~~~~-a~~~~~~~~~~ 96 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFSPELLKL-ARANAPHADVY 96 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG-S----SEEEEEESCHHHHHH-HHHHCTTSEEE
T ss_pred CeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECCHHHHHH-HHHhCCCceEE
Confidence 479999999987 55666666 2 389999988764443 33333334443
No 122
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=57.23 E-value=35 Score=30.80 Aligned_cols=97 Identities=11% Similarity=0.067 Sum_probs=55.1
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCC-
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGV- 261 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~- 261 (434)
.-+|+|+|.|.|.-=.. |+.+ .|..++|||+.+.+ .+.+.++..|++ .+|. ..+.+++ ... ...
T Consensus 71 ~~~vLDiG~G~G~~~~~----la~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~--~~d~~~~-~~~-~~~~ 139 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLP----IKIC---FPHLHVTIVDSLNKRITFLEKLSEALQLENTTFC--HDRAETF-GQR-KDVR 139 (240)
T ss_dssp CCEEEEECSSSCTTHHH----HHHH---CTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEE--ESCHHHH-TTC-TTTT
T ss_pred CCEEEEecCCCCHHHHH----HHHh---CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEE--eccHHHh-ccc-cccc
Confidence 34899999998863222 2221 12458999999886 455566677874 4444 3334343 110 000
Q ss_pred CCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 262 RPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 262 ~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
..=+.++.+.+ .....+++.+ +-|+|.-.+++.
T Consensus 140 ~~fD~V~~~~~--------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 140 ESYDIVTARAV--------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp TCEEEEEEECC--------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEEecc--------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 01133333321 3467788776 778998777664
No 123
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=56.89 E-value=30 Score=29.28 Aligned_cols=104 Identities=13% Similarity=0.025 Sum_probs=55.8
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccC-
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLG- 260 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~- 260 (434)
.-+|+|+|.|.|.-- ..++.++ .-++|||+.+.+ ...+-++..|++ .+|.. .++.+.. + .+.
T Consensus 45 ~~~vLD~GcG~G~~~----~~~~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~-~-~~~~ 112 (187)
T 2fhp_A 45 GGMALDLYSGSGGLA----IEAVSRG----MDKSICIEKNFAALKVIKENIAITKEPEKFEVRK--MDANRAL-E-QFYE 112 (187)
T ss_dssp SCEEEETTCTTCHHH----HHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHH-H-HHHH
T ss_pred CCCEEEeCCccCHHH----HHHHHcC----CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEE--CcHHHHH-H-HHHh
Confidence 348999999988642 2234432 358999998876 334445556663 55543 2222210 0 000
Q ss_pred -CCCCceEEEecccccccccCCChHHHHHHH---HhcCCCEEEEEecCCCC
Q 013903 261 -VRPGETIVVHWMHHCLYDITGSDLGTLRML---TLLRPKLITIVEQDLSH 307 (434)
Q Consensus 261 -~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i---r~L~P~vvv~vE~ea~~ 307 (434)
-..=+.++.|...+ ......++..+ +-|+|.-+++++.....
T Consensus 113 ~~~~fD~i~~~~~~~-----~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYA-----KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TTCCEEEEEECCCGG-----GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCCEEEECCCCC-----chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 11124566664422 12234555554 56899988877654443
No 124
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=56.64 E-value=18 Score=33.14 Aligned_cols=100 Identities=13% Similarity=0.147 Sum_probs=55.9
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccC-
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLG- 260 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~- 260 (434)
.-+|+|+|.+.|.--. .|+.+- |+..+||+|+.+.+ ...+.++..|++ .+|.. .+..+. ...+.
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~--l~~~~~ 133 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--PADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE--GPALQS--LESLGE 133 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHH--HHTCCS
T ss_pred CCEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHH--HHhcCC
Confidence 3489999999886543 333332 33579999999876 445566667775 55543 222221 01110
Q ss_pred CCCCceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEec
Q 013903 261 VRPGETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVEQ 303 (434)
Q Consensus 261 ~~~~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE~ 303 (434)
..+=+.++++.- ......+|+. .+.|+|.-+++++.
T Consensus 134 ~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 134 CPAFDLIFIDAD-------KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp CCCCSEEEECSC-------GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCCeEEEEECCc-------hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 112245555421 1123445644 57889998888753
No 125
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=56.43 E-value=60 Score=31.73 Aligned_cols=105 Identities=10% Similarity=0.024 Sum_probs=56.4
Q ss_pred CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHH-HcCCc----eEEeeeccCcccccccccc
Q 013903 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAM-SLGLP----FDFNPLEGKIGNIIDVSQL 259 (434)
Q Consensus 185 ~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~-slgvp----FeF~~V~~~~e~l~~~~~L 259 (434)
.+..+|+|+|.|.| .+...|+++. |..+||+|+.+.+.+ +.|+ .++.+ ++|. ..+..+.. ..+
T Consensus 88 p~~~rVLdIG~G~G----~la~~la~~~---p~~~v~~VEidp~vi-~~Ar~~~~~~~~~rv~v~--~~Da~~~l--~~~ 155 (317)
T 3gjy_A 88 ASKLRITHLGGGAC----TMARYFADVY---PQSRNTVVELDAELA-RLSREWFDIPRAPRVKIR--VDDARMVA--ESF 155 (317)
T ss_dssp GGGCEEEEESCGGG----HHHHHHHHHS---TTCEEEEEESCHHHH-HHHHHHSCCCCTTTEEEE--ESCHHHHH--HTC
T ss_pred CCCCEEEEEECCcC----HHHHHHHHHC---CCcEEEEEECCHHHH-HHHHHhccccCCCceEEE--ECcHHHHH--hhc
Confidence 34689999999988 4566666532 234899999887633 3343 34432 3332 22111110 001
Q ss_pred CCCCCceEEEecccccccccCCC--hHHHHHHH-HhcCCCEEEEEec
Q 013903 260 GVRPGETIVVHWMHHCLYDITGS--DLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 260 ~~~~~EaLaVN~~~h~l~~~~~~--~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
.-..=++|+++...+. ..+.. ...|++.+ +.|+|.-++++.-
T Consensus 156 ~~~~fDvIi~D~~~~~--~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 156 TPASRDVIIRDVFAGA--ITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CTTCEEEEEECCSTTS--CCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCEEEECCCCcc--ccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 1112257777754321 11111 25777665 7799998877644
No 126
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=55.85 E-value=54 Score=30.40 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=31.8
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGL 239 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgv 239 (434)
+.-.|+|+|.|.|. +...||.+ | .++|||+.+...+....+..++
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~S~~~i~~a~~~~~~ 112 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEISEIGIREFFAEQNL 112 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECSCHHHHHHHHHHTTC
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEECCHHHHHHHHHhccc
Confidence 45689999999885 34557765 3 3899999998866555455543
No 127
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=53.78 E-value=62 Score=30.72 Aligned_cols=108 Identities=12% Similarity=-0.018 Sum_probs=58.3
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccC
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGK 249 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~ 249 (434)
.-..+++.+.-...-+|+|+|.|.|. +...|+.+ ++..-++|||+.+.+ ...+.++..|++ .+|.. .+
T Consensus 63 ~~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~--~d 134 (317)
T 1dl5_A 63 LMALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC--GD 134 (317)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--SC
T ss_pred HHHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE--CC
Confidence 34456666665555689999998885 33444443 222458999998876 333344455654 44432 22
Q ss_pred ccccccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEEe
Q 013903 250 IGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIVE 302 (434)
Q Consensus 250 ~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~vE 302 (434)
..+.. + .-.+=++++++.+.+-+. + ...+.|+|.-++++.
T Consensus 135 ~~~~~-~---~~~~fD~Iv~~~~~~~~~------~---~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 135 GYYGV-P---EFSPYDVIFVTVGVDEVP------E---TWFTQLKEGGRVIVP 174 (317)
T ss_dssp GGGCC-G---GGCCEEEEEECSBBSCCC------H---HHHHHEEEEEEEEEE
T ss_pred hhhcc-c---cCCCeEEEEEcCCHHHHH------H---HHHHhcCCCcEEEEE
Confidence 22220 1 011225666665432121 2 335678887666653
No 128
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=53.18 E-value=33 Score=32.62 Aligned_cols=61 Identities=13% Similarity=0.161 Sum_probs=40.6
Q ss_pred HHhcCCCccchh-HhHhH----HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH
Q 013903 160 YNSICPLIKFSH-FTANQ----AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL 230 (434)
Q Consensus 160 f~~~sP~~kfa~-~tANq----AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL 230 (434)
-+.+.|=-++++ |..|+ .|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+.+.+.+
T Consensus 16 ~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~~~ 81 (271)
T 3fut_A 16 RHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLRLR 81 (271)
T ss_dssp HTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGGGH
T ss_pred hcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHHHH
Confidence 344556556665 44343 45666665556 99999999886 666777663 3799999887633
No 129
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=53.09 E-value=48 Score=31.27 Aligned_cols=44 Identities=7% Similarity=0.052 Sum_probs=30.6
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
+.|++.+.-...-+|+|+|.|.|.--..|.+ + + -++|||+.+.+
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~----~-~----~~v~~vD~~~~ 61 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLE----K-A----KKVVACELDPR 61 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHH----H-S----SEEEEEESCHH
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHh----h-C----CEEEEEECCHH
Confidence 4555666544556899999999986554444 3 2 18999998876
No 130
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=52.46 E-value=50 Score=31.38 Aligned_cols=56 Identities=11% Similarity=0.054 Sum_probs=35.9
Q ss_pred hHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC
Q 013903 175 NQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL 239 (434)
Q Consensus 175 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv 239 (434)
.+.|++++.-...-.|+|+|.|.|.- ...|+.+ + -++|||+.+.+ .+.+-++..|+
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~l----t~~La~~-~----~~v~~vDi~~~~~~~a~~~~~~~~~ 89 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNL----TVKLLPL-A----KKVITIDIDSRMISEVKKRCLYEGY 89 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTT----HHHHTTT-S----SEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHH----HHHHHhc-C----CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 44566666544455899999999974 3455555 2 28999998876 33333334454
No 131
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=52.22 E-value=67 Score=28.21 Aligned_cols=44 Identities=9% Similarity=0.076 Sum_probs=30.2
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLG 238 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slg 238 (434)
+.-+|+|+|.|.|.- ...|+.+ | .++|||+.+.+.|....+..+
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~-g----~~V~gvD~S~~~l~~a~~~~~ 65 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ-G----YHVVGAELSEAAVERYFTERG 65 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH-C----CEEEEEEECHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC-C----CeEEEEeCCHHHHHHHHHHcc
Confidence 345799999998853 3446655 2 389999999886655544444
No 132
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=51.68 E-value=31 Score=31.03 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=26.2
Q ss_pred CCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH
Q 013903 183 DGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL 230 (434)
Q Consensus 183 ~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL 230 (434)
...+.-.|+|+|.|.|.-= ..|+.+ ++ .++|||+.+...+
T Consensus 53 ~~~~~~~vLDlGcG~G~~~----~~l~~~--~~--~~v~gvD~s~~~l 92 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQ----LLSACE--SF--TEIIVSDYTDQNL 92 (265)
T ss_dssp SSCCEEEEEEESCTTCCGG----GTTGGG--TE--EEEEEEESCHHHH
T ss_pred cccCCCEEEEECCCccHHH----HHHhhc--cc--CeEEEecCCHHHH
Confidence 3355678999999988532 123322 22 6899999887633
No 133
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=51.57 E-value=67 Score=26.71 Aligned_cols=98 Identities=9% Similarity=0.023 Sum_probs=53.6
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCcccccccc
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~ 257 (434)
+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+.+.+.+....+. .-..+|..- +
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~~~~~a~~~-~~~v~~~~~--d-------- 68 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVIALKEVKEK-FDSVITLSD--P-------- 68 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHHHHHHHHHH-CTTSEEESS--G--------
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHHHHHHHHHh-CCCcEEEeC--C--------
Confidence 4444544566789999999987 344555442 3 999999887644333333 222333321 1
Q ss_pred ccCCCCC--ceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 258 QLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 258 ~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
+...++ +.++.+. ++|. + ....+|+. .+.|+|.-.+++
T Consensus 69 -~~~~~~~~D~v~~~~~l~~~----~-~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 69 -KEIPDNSVDFILFANSFHDM----D-DKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp -GGSCTTCEEEEEEESCSTTC----S-CHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCCCCceEEEEEccchhcc----c-CHHHHHHHHHHhcCCCCEEEE
Confidence 112222 4454443 3332 2 34566654 477899766654
No 134
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=50.91 E-value=38 Score=29.38 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=46.9
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCCce
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGET 266 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~Ea 266 (434)
.-+|+|+|.|.|. +...|+.++ .-++|||+.+.+.+....+.+. ..+|. ..+..++ . ..=++
T Consensus 52 ~~~vlD~gcG~G~----~~~~l~~~~----~~~v~~vD~~~~~~~~a~~~~~-~~~~~--~~d~~~~------~-~~~D~ 113 (200)
T 1ne2_A 52 GRSVIDAGTGNGI----LACGSYLLG----AESVTAFDIDPDAIETAKRNCG-GVNFM--VADVSEI------S-GKYDT 113 (200)
T ss_dssp TSEEEEETCTTCH----HHHHHHHTT----BSEEEEEESCHHHHHHHHHHCT-TSEEE--ECCGGGC------C-CCEEE
T ss_pred CCEEEEEeCCccH----HHHHHHHcC----CCEEEEEECCHHHHHHHHHhcC-CCEEE--ECcHHHC------C-CCeeE
Confidence 3479999999987 344555551 3489999988765444333332 33333 2222222 1 12257
Q ss_pred EEEecccccccccCCChHHHHHHHHhcCCCEEEE
Q 013903 267 IVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITI 300 (434)
Q Consensus 267 LaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~ 300 (434)
++.|...|.+.+ +....+|+.+.+.- .++.+
T Consensus 114 v~~~~p~~~~~~--~~~~~~l~~~~~~~-g~~~~ 144 (200)
T 1ne2_A 114 WIMNPPFGSVVK--HSDRAFIDKAFETS-MWIYS 144 (200)
T ss_dssp EEECCCC---------CHHHHHHHHHHE-EEEEE
T ss_pred EEECCCchhccC--chhHHHHHHHHHhc-CcEEE
Confidence 777754332322 22345666554443 44333
No 135
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=50.83 E-value=25 Score=32.47 Aligned_cols=46 Identities=20% Similarity=0.302 Sum_probs=30.6
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL 230 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL 230 (434)
+.|++.+.....-+|+|+|.|.|. +...|+.+ |+ ++|||+.+.+.|
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~l 92 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDKML 92 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHHHH
Confidence 344444443455689999999986 34445554 32 999999988643
No 136
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=50.65 E-value=29 Score=32.23 Aligned_cols=38 Identities=13% Similarity=-0.055 Sum_probs=25.5
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA 231 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~ 231 (434)
+.-+|+|+|.|.|. +..+. +.++ .-+||||+.+.+.|.
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~---~~~~----~~~v~gvD~s~~~l~ 108 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLS---ACSH----FEDITMTDFLEVNRQ 108 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTT---GGGG----CSEEEEECSCHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHh---hccC----CCeEEEeCCCHHHHH
Confidence 44689999999998 54322 2222 238999999877443
No 137
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=50.17 E-value=73 Score=28.25 Aligned_cols=105 Identities=7% Similarity=0.011 Sum_probs=55.2
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~ 261 (434)
+.-.|+|+|.|.|.- ...||.+. |..++|||+.+.+ ...+-++..|++ ++|. ..+..++ . .. +
T Consensus 38 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~--~~d~~~l-~-~~--~ 104 (213)
T 2fca_A 38 DNPIHIEVGTGKGQF----ISGMAKQN---PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLL--NIDADTL-T-DV--F 104 (213)
T ss_dssp CCCEEEEECCTTSHH----HHHHHHHC---TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--CCCGGGH-H-HH--C
T ss_pred CCceEEEEecCCCHH----HHHHHHHC---CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEE--eCCHHHH-H-hh--c
Confidence 345699999999864 33445442 3468999999887 334445556763 4443 2333222 0 01 1
Q ss_pred CCC--ceEEEeccc--cc-cccc-CCChHHHHHHH-HhcCCCEEEEEec
Q 013903 262 RPG--ETIVVHWMH--HC-LYDI-TGSDLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 262 ~~~--EaLaVN~~~--h~-l~~~-~~~~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
.++ +.+.+|+.- .. .+.. .-....+|+.+ +-|+|.-.+++.-
T Consensus 105 ~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 105 EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 122 345555321 00 0000 00125677655 5689997777654
No 138
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=49.77 E-value=13 Score=32.30 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=27.8
Q ss_pred HHhhcCC-CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 178 IFQALDG-ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 178 ILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
+++.+.. .+.-+|+|+|.|.|.-- ..|+.+. |..++|||+.+.+
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~----~~l~~~~---~~~~v~~vD~~~~ 65 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIA----VSIALAC---PGVSVTAVDLSMD 65 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHH----HHHHHHC---TTEEEEEEECC--
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHH----HHHHHhC---CCCeEEEEECCHH
Confidence 3334433 56679999999999633 3333331 4579999998776
No 139
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=48.37 E-value=51 Score=27.59 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=36.0
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEe
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFN 244 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~ 244 (434)
.+++.+.-...-+|+|+|.|.|. +...|+.+. .++|+++.+.+ ...+.++..|+ .++|.
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~ 87 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM 87 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCHHHHHHHHHHHHHcCCCcceEEE
Confidence 34444444445589999998874 334444443 58999998876 33444455665 44444
No 140
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=47.98 E-value=1.1e+02 Score=27.60 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=51.9
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCC-
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG- 264 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~- 264 (434)
..-.|+|+|.|.|. +...|+.+ + .++|||+.+.+.+....+... . .| +..+.+++ ...++
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~~l~~a~~~~~-~-~~--~~~d~~~~------~~~~~~ 114 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPSKEMLEVAREKGV-K-NV--VEAKAEDL------PFPSGA 114 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCHHHHHHHHHHTC-S-CE--EECCTTSC------CSCTTC
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCCHHHHHHHHhhcC-C-CE--EECcHHHC------CCCCCC
Confidence 45689999999886 44556655 2 389999988765443333332 1 12 22223332 22222
Q ss_pred -ceEEEe-cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 265 -ETIVVH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 265 -EaLaVN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
+.++.+ .++|... ....+|+.+ +.|+|.-.+++.
T Consensus 115 fD~v~~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 115 FEAVLALGDVLSYVE----NKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp EEEEEECSSHHHHCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEcchhhhccc----cHHHHHHHHHHHcCCCeEEEEE
Confidence 344443 3444322 266677655 678998666653
No 141
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=47.64 E-value=67 Score=28.52 Aligned_cols=98 Identities=9% Similarity=0.065 Sum_probs=53.1
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~~~ 262 (434)
-+|+|+|.+.|.-=. .|+.+- |..++|+|+.+.+ ...+.++..|+. ++|.. .+..+.. +....-.
T Consensus 56 ~~vLdiG~G~G~~~~----~la~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~-~~~~~~~ 125 (233)
T 2gpy_A 56 ARILEIGTAIGYSAI----RMAQAL---PEATIVSIERDERRYEEAHKHVKALGLESRIELLF--GDALQLG-EKLELYP 125 (233)
T ss_dssp SEEEEECCTTSHHHH----HHHHHC---TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC--SCGGGSH-HHHTTSC
T ss_pred CEEEEecCCCcHHHH----HHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--CCHHHHH-HhcccCC
Confidence 379999999886433 333321 1369999998876 334445556763 55542 2222210 1000001
Q ss_pred CCceEEEecccccccccCCChHHHHH-HHHhcCCCEEEEEe
Q 013903 263 PGETIVVHWMHHCLYDITGSDLGTLR-MLTLLRPKLITIVE 302 (434)
Q Consensus 263 ~~EaLaVN~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~vE 302 (434)
+=+.++++...+ ....+|+ ..+.|+|.-++++.
T Consensus 126 ~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 126 LFDVLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CEEEEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 124566554321 3455555 45778999888875
No 142
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=47.25 E-value=1.2e+02 Score=29.95 Aligned_cols=115 Identities=15% Similarity=0.087 Sum_probs=64.8
Q ss_pred HhHHHHhhcC------CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEe
Q 013903 174 ANQAIFQALD------GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFN 244 (434)
Q Consensus 174 ANqAILEA~~------g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~ 244 (434)
..+.+++.+. ..+.-+|+|+|.|.|.- ...|+.+ + .+||+|+.+.. ...+-++..|+..+|.
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~----~~~la~~-g----~~V~gvDis~~al~~A~~n~~~~~~~v~~~ 285 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGAL----TLPLARM-G----AEVVGVEDDLASVLSLQKGLEANALKAQAL 285 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTT----HHHHHHT-T----CEEEEEESBHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHH----HHHHHHc-C----CEEEEEECCHHHHHHHHHHHHHcCCCeEEE
Confidence 3355555552 22445899999999964 3344444 2 39999998876 4444556677776665
Q ss_pred eeccCccccccccccCCCCCceEEEeccccccccc-CCChHHHHH-HHHhcCCCEEEEEec
Q 013903 245 PLEGKIGNIIDVSQLGVRPGETIVVHWMHHCLYDI-TGSDLGTLR-MLTLLRPKLITIVEQ 303 (434)
Q Consensus 245 ~V~~~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~-~~~~~~~L~-~ir~L~P~vvv~vE~ 303 (434)
. .++.+.. . .-..=+.|+.|..+|..... ......+++ ..+.|+|.-.+++..
T Consensus 286 ~--~D~~~~~-~---~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 286 H--SDVDEAL-T---EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp E--CSTTTTS-C---TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred E--cchhhcc-c---cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 3 2232321 1 11122577777554421111 122345665 457789988777653
No 143
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=46.30 E-value=61 Score=27.27 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=57.5
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~~~ 262 (434)
-.|+|+|.|.|.- ...|+.++ .-++|||+.+.+ ...+.++..|++ .+|. ..++.+.. + .+. .
T Consensus 33 ~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~--~~d~~~~~-~-~~~-~ 99 (177)
T 2esr_A 33 GRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLL--KMEAERAI-D-CLT-G 99 (177)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEE--CSCHHHHH-H-HBC-S
T ss_pred CeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE--ECcHHHhH-H-hhc-C
Confidence 4799999998863 33455552 358999999876 444556667765 4544 23222210 0 000 1
Q ss_pred CCceEEEecccccccccCCChHHHHHHH---HhcCCCEEEEEecCCCC
Q 013903 263 PGETIVVHWMHHCLYDITGSDLGTLRML---TLLRPKLITIVEQDLSH 307 (434)
Q Consensus 263 ~~EaLaVN~~~h~l~~~~~~~~~~L~~i---r~L~P~vvv~vE~ea~~ 307 (434)
.=+.++.|...+. .....+++.+ +-|+|.-+++++.....
T Consensus 100 ~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 100 RFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 1245555543221 1234556655 67899988877655443
No 144
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=44.83 E-value=45 Score=29.09 Aligned_cols=62 Identities=11% Similarity=0.055 Sum_probs=38.0
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEe
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFN 244 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~ 244 (434)
.+++.+.-...-+|+|+|.|.|.--..|.+.. .|.-++|+|+.+.+ ...+.++..|++ .+|.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~ 133 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERIPELAEKAERTLRKLGYDNVIVI 133 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEE
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEE
Confidence 45555554455689999999887555554443 13458999998876 333334445553 4443
No 145
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=44.67 E-value=64 Score=27.35 Aligned_cols=101 Identities=12% Similarity=0.094 Sum_probs=52.2
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC-ceEEeeeccCccccccccccCCCC
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL-PFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv-pFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
-+|+|+|.|.|.- ...|+.+ .-++|||+.+.+ ...+-++..|+ ..+|.. ...+++. .+.-.+
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~--~~~~~l~---~~~~~~ 89 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-----SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL--DGHENLD---HYVREP 89 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-----SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE--SCGGGGG---GTCCSC
T ss_pred CEEEEEcCCCCHH----HHHHHHh-----CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe--CcHHHHH---hhccCC
Confidence 3689999998863 3445655 348999999876 33445555665 345543 3333321 011111
Q ss_pred CceEEEecc--cccccc---cCCChHHHHH-HHHhcCCCEEEEEe
Q 013903 264 GETIVVHWM--HHCLYD---ITGSDLGTLR-MLTLLRPKLITIVE 302 (434)
Q Consensus 264 ~EaLaVN~~--~h~l~~---~~~~~~~~L~-~ir~L~P~vvv~vE 302 (434)
=++++.|.- ++.-.. .+.....+|+ ..+-|+|.-.+++-
T Consensus 90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 245555531 110000 1122334554 44789998766653
No 146
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=43.61 E-value=25 Score=29.48 Aligned_cols=49 Identities=27% Similarity=0.512 Sum_probs=38.4
Q ss_pred eEEEEcccC-CccccHHHHHHHhcCCCCCceEEEEeecCCh-HHHHHHHHHcCCce
Q 013903 188 VHIIDLDIM-QGLQWPGLFHILVSRSKKIRSMRITGFGSSS-ERLADFAMSLGLPF 241 (434)
Q Consensus 188 VHIIDfgI~-~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~-~rL~~fA~slgvpF 241 (434)
-=|||++-. ...+|..|++.|.++ .|++-||.... +.+.+.|...|+|+
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~-----gl~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTST-----GLRIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTT-----TCEEEEEESCCCHHHHHHHHHHTCCE
T ss_pred cEEEEccccCChHHHHHHHHHHHHc-----CCEEEEEeCCCcHHHHHHHHHCCCCc
Confidence 347888744 457899999999876 58888886544 57889999999986
No 147
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=43.26 E-value=1.1e+02 Score=27.49 Aligned_cols=105 Identities=10% Similarity=0.022 Sum_probs=57.6
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKI 250 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~ 250 (434)
..|++.+.-...-+|+|+|.|.|.--..|.+.+ .|..++++++.+.+ ...+.++..|++ .+|.. .++
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~ 154 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL--KDI 154 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC--SCG
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE--Cch
Confidence 356666665556689999999986433333333 13468999999876 334445556765 45442 222
Q ss_pred cccccccccCCCCCceEEEecccccccccCCChHHHHHHHHhcCCCEEEEE
Q 013903 251 GNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLTLLRPKLITIV 301 (434)
Q Consensus 251 e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir~L~P~vvv~v 301 (434)
.+. +.-..=++++.| .+.+...+-...+.|+|.-.+++
T Consensus 155 ~~~-----~~~~~~D~v~~~--------~~~~~~~l~~~~~~L~~gG~l~~ 192 (255)
T 3mb5_A 155 YEG-----IEEENVDHVILD--------LPQPERVVEHAAKALKPGGFFVA 192 (255)
T ss_dssp GGC-----CCCCSEEEEEEC--------SSCGGGGHHHHHHHEEEEEEEEE
T ss_pred hhc-----cCCCCcCEEEEC--------CCCHHHHHHHHHHHcCCCCEEEE
Confidence 221 111111233332 12223334445577899877765
No 148
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=43.14 E-value=1.2e+02 Score=26.01 Aligned_cols=98 Identities=12% Similarity=0.043 Sum_probs=51.2
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCcccccccc
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~ 257 (434)
+++.+.. +.-+|+|+|.|.|. +...| + .-++|||+.+.+.+....+.. -..+|. ..+.+++
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~--~~d~~~~---- 89 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----P---YPQKVGVEPSEAMLAVGRRRA-PEATWV--RAWGEAL---- 89 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----C---CSEEEEECCCHHHHHHHHHHC-TTSEEE--CCCTTSC----
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----C---CCeEEEEeCCHHHHHHHHHhC-CCcEEE--EcccccC----
Confidence 3444433 45589999999885 22333 1 128999998886554433333 223332 2222222
Q ss_pred ccCCCCC--ceEEEec-ccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 258 QLGVRPG--ETIVVHW-MHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 258 ~L~~~~~--EaLaVN~-~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
...++ +.++.+. ++|. + ....+|+. .+-|+|.-.+++
T Consensus 90 --~~~~~~fD~v~~~~~l~~~----~-~~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 90 --PFPGESFDVVLLFTTLEFV----E-DVERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp --CSCSSCEEEEEEESCTTTC----S-CHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCCCcEEEEEEcChhhhc----C-CHHHHHHHHHHHcCCCCEEEE
Confidence 22222 4454443 3342 2 34566655 477899865554
No 149
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=42.10 E-value=1.5e+02 Score=27.21 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=37.0
Q ss_pred HHHHhhcC---CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHc
Q 013903 176 QAIFQALD---GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSL 237 (434)
Q Consensus 176 qAILEA~~---g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~sl 237 (434)
.+|+++++ =...=+|+|+|.+.|. |...+-.+... . =+|+||+.+.. .|.+.|+..
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-~----G~V~avD~s~~~l~~l~~~a~~r 124 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-N----GKAYGVEFSPRVVRELLLVAQRR 124 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-T----SEEEEEECCHHHHHHHHHHHHHC
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-C----CEEEEEECcHHHHHHHHHHhhhc
Confidence 45566554 2334579999999998 66666555422 2 28999999876 455666553
No 150
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=41.98 E-value=47 Score=30.56 Aligned_cols=92 Identities=16% Similarity=0.106 Sum_probs=51.6
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
.-+|+|+|.|.|. +...++.+ |+ ++|||+.+.. ...+-++..|++.+|. ..++.+. +.-.+
T Consensus 121 ~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~--~~d~~~~-----~~~~~ 184 (254)
T 2nxc_A 121 GDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPMVLPQAEANAKRNGVRPRFL--EGSLEAA-----LPFGP 184 (254)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGGGHHHHHHHHHHTTCCCEEE--ESCHHHH-----GGGCC
T ss_pred CCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHHHHHHHHHHHHHcCCcEEEE--ECChhhc-----CcCCC
Confidence 3479999999886 33345543 33 9999998876 4445566667764443 2222221 11112
Q ss_pred CceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 264 GETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 264 ~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
=+.++.|.+.+. ...++.. .+.|+|.-.+++
T Consensus 185 fD~Vv~n~~~~~-------~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 185 FDLLVANLYAEL-------HAALAPRYREALVPGGRALL 216 (254)
T ss_dssp EEEEEEECCHHH-------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCcHHH-------HHHHHHHHHHHcCCCCEEEE
Confidence 256666754331 2344544 466788766554
No 151
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=41.73 E-value=59 Score=29.30 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=59.2
Q ss_pred hhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc---eEEeeeccCcccc
Q 013903 180 QALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP---FDFNPLEGKIGNI 253 (434)
Q Consensus 180 EA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp---FeF~~V~~~~e~l 253 (434)
......+.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.+.+ ...+..+..|+. .+|.. .+..++
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~--gda~~~ 121 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL--SRPLDV 121 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC--SCHHHH
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE--cCHHHH
Confidence 33344445689999998886544444443 23458999999886 455666777876 55543 222221
Q ss_pred ccccccCCCCCceEEEecccccccccCCChHHHHH-HHHhcCCCEEEEEec
Q 013903 254 IDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLR-MLTLLRPKLITIVEQ 303 (434)
Q Consensus 254 ~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~vE~ 303 (434)
. ..+.-.+=+.+.++.- ......+++ ..+.|+|.-+++++.
T Consensus 122 l--~~~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 122 M--SRLANDSYQLVFGQVS-------PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp G--GGSCTTCEEEEEECCC-------TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred H--HHhcCCCcCeEEEcCc-------HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 0 1110011134444321 122345564 457889998888743
No 152
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=40.96 E-value=54 Score=30.47 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=36.1
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHc
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSL 237 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~sl 237 (434)
..|++++.-...-+|+|+|.|.|. |-..|+.++ .-++|||+.+.+ +.+.|+..
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~~-~~~~~~~~ 73 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDRE-MVENLKSI 73 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCHH-HHHHHTTS
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCHH-HHHHHHhc
Confidence 345666654455689999999875 677787772 348999998875 44444443
No 153
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=40.01 E-value=1.5e+02 Score=28.69 Aligned_cols=95 Identities=12% Similarity=0.037 Sum_probs=52.9
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHHcCC-ceEEeeeccCccccccccccCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMSLGL-PFDFNPLEGKIGNIIDVSQLGV 261 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~slgv-pFeF~~V~~~~e~l~~~~~L~~ 261 (434)
.-=+|+|+|.|.|. ..+++ +|..++ -++|||+.+.+++ .+.++..|+ .++|. ..+..++ .-
T Consensus 122 ~g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v--~gDa~~l------~d 186 (298)
T 3fpf_A 122 RGERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIEPDIAELSRKVIEGLGVDGVNVI--TGDETVI------DG 186 (298)
T ss_dssp TTCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESSHHHHHHHHHHHHHHTCCSEEEE--ESCGGGG------GG
T ss_pred CcCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECCHHHHHHHHHHHHhcCCCCeEEE--ECchhhC------CC
Confidence 34578999887763 33332 344444 4899999998733 344555676 34443 2222222 11
Q ss_pred CCCceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEe
Q 013903 262 RPGETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVE 302 (434)
Q Consensus 262 ~~~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE 302 (434)
.+=+++.++.. ..+...+++. .+.|+|.-.+++.
T Consensus 187 ~~FDvV~~~a~-------~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 187 LEFDVLMVAAL-------AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CCCSEEEECTT-------CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCcCEEEECCC-------ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 12245555432 2345566654 4779998777764
No 154
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=38.25 E-value=57 Score=30.56 Aligned_cols=44 Identities=18% Similarity=0.232 Sum_probs=28.3
Q ss_pred HHhhcCCC--CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 178 IFQALDGA--DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 178 ILEA~~g~--~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
+++.+... +.-.|+|+|.+.|. +...|+.+-+ ..+||||+.+..
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDis~~ 81 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDIDSR 81 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEESCHH
T ss_pred HHHhhhhhhcCCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECCCHH
Confidence 34444332 34579999999993 4445555432 249999998875
No 155
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=38.24 E-value=50 Score=30.48 Aligned_cols=52 Identities=17% Similarity=0.119 Sum_probs=33.2
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEe
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFN 244 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~ 244 (434)
+.-+|+|+|.|.|.-=. .|+... |..++|||+.+.+ ...+-++..|++ .+|.
T Consensus 109 ~~~~vLDlG~GsG~~~~----~la~~~---~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~ 164 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIAL----ALASER---PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHIL 164 (276)
T ss_dssp SCCEEEEETCTTSHHHH----HHHHHC---TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCEEEEecCCccHHHH----HHHHhC---CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 44589999999986433 333221 3468999998876 334455666775 4443
No 156
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=37.85 E-value=95 Score=28.97 Aligned_cols=44 Identities=14% Similarity=0.196 Sum_probs=32.3
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
+.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+.+.+
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid~~ 62 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEIDRD 62 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECCHH
T ss_pred HHHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECCHH
Confidence 346666665555689999999987 456666663 38999998876
No 157
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=37.73 E-value=47 Score=29.90 Aligned_cols=100 Identities=9% Similarity=0.088 Sum_probs=56.0
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLG 260 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~ 260 (434)
+.-.|+|+|.+.|.-- ..|+.. .|..++|+|+.+.+ ...+.++..|++ .+|.. .+..+.. ++.+
T Consensus 71 ~~~~vLDiG~G~G~~~----~~la~~---~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~-~~~~- 139 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSS----MQFASI---SDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIE--GNALEQF-ENVN- 139 (232)
T ss_dssp TCCEEEEECCSSSHHH----HHHHTT---CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE--SCGGGCH-HHHT-
T ss_pred CCCEEEEEeCchhHHH----HHHHHh---CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--CCHHHHH-Hhhc-
Confidence 3448999999988642 234432 12569999999876 445556667764 55543 2222220 1011
Q ss_pred CCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEec
Q 013903 261 VRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 261 ~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
-.+=+.++++.- ......+|+.+ +.|+|.-+++++.
T Consensus 140 ~~~fD~V~~~~~-------~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 140 DKVYDMIFIDAA-------KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TSCEEEEEEETT-------SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cCCccEEEEcCc-------HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 011235554421 22345566554 7789999988843
No 158
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=37.20 E-value=1.7e+02 Score=27.08 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=22.5
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecC-ChH
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGS-SSE 228 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~-~~~ 228 (434)
-.|+|+|.|.|.- + ..|+.+ | .-++|||+. +.+
T Consensus 81 ~~vLDlG~G~G~~--~--~~~a~~--~--~~~v~~~D~s~~~ 114 (281)
T 3bzb_A 81 KTVCELGAGAGLV--S--IVAFLA--G--ADQVVATDYPDPE 114 (281)
T ss_dssp CEEEETTCTTSHH--H--HHHHHT--T--CSEEEEEECSCHH
T ss_pred CeEEEecccccHH--H--HHHHHc--C--CCEEEEEeCCCHH
Confidence 3799999998852 2 245544 2 138999999 665
No 159
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=37.15 E-value=54 Score=29.60 Aligned_cols=53 Identities=11% Similarity=-0.050 Sum_probs=35.5
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEee
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNP 245 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~ 245 (434)
+.-+|+|+|.|.|.--..|.+.. |..++|||+.+.+ ...+-++..|++ .+|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEE
Confidence 34589999999997655555443 2368999998876 334445556765 56653
No 160
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=36.76 E-value=1.1e+02 Score=28.08 Aligned_cols=37 Identities=22% Similarity=0.209 Sum_probs=26.3
Q ss_pred CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 185 ~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
.+.-+|+|+|.|.|.- ...|+.+. |..+||||+.+.+
T Consensus 35 ~~~~~VLDlG~G~G~~----~l~la~~~---~~~~v~gvDi~~~ 71 (260)
T 2ozv_A 35 DRACRIADLGAGAGAA----GMAVAARL---EKAEVTLYERSQE 71 (260)
T ss_dssp CSCEEEEECCSSSSHH----HHHHHHHC---TTEEEEEEESSHH
T ss_pred cCCCEEEEeCChHhHH----HHHHHHhC---CCCeEEEEECCHH
Confidence 3456899999999863 33444442 3579999998876
No 161
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=36.64 E-value=1.1e+02 Score=27.18 Aligned_cols=98 Identities=9% Similarity=-0.052 Sum_probs=52.5
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCC
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRP 263 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~ 263 (434)
.-+|+|+|.|.|.- ...|+.+-+ |.-+++||+.+.+ .+.+.|+.. -..+|. ..+..+. ..+...+
T Consensus 78 ~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~--~~d~~~~---~~~~~~~ 145 (233)
T 2ipx_A 78 GAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEFSHRSGRDLINLAKKR-TNIIPV--IEDARHP---HKYRMLI 145 (233)
T ss_dssp TCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECCCHHHHHHHHHHHHHC-TTEEEE--CSCTTCG---GGGGGGC
T ss_pred CCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHHHHHhhcc-CCeEEE--EcccCCh---hhhcccC
Confidence 44899999999863 334444321 2348999998865 455666653 233333 2222221 1111111
Q ss_pred C--ceEEEecccccccccCCChHHHHH-HHHhcCCCEEEEEe
Q 013903 264 G--ETIVVHWMHHCLYDITGSDLGTLR-MLTLLRPKLITIVE 302 (434)
Q Consensus 264 ~--EaLaVN~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~vE 302 (434)
+ +.++.|.. .+.....++. ..+.|+|.-.+++.
T Consensus 146 ~~~D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 146 AMVDVIFADVA------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCEEEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcEEEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 2 34444322 1222344554 77899999877764
No 162
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=36.63 E-value=33 Score=27.67 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=26.0
Q ss_pred CCCceEEEEeecCChH-----------HHHHHHHHcCCceEEe
Q 013903 213 KKIRSMRITGFGSSSE-----------RLADFAMSLGLPFDFN 244 (434)
Q Consensus 213 ~gPP~LRITgI~~~~~-----------rL~~fA~slgvpFeF~ 244 (434)
-|||..|||...++.. .+.+..+..|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 4789999998888753 6777888899999886
No 163
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=35.58 E-value=1.7e+02 Score=26.80 Aligned_cols=58 Identities=21% Similarity=0.189 Sum_probs=36.3
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL 239 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv 239 (434)
..|++.+.-...-.|+|+|.|.|.- ...|+.+-+ |..++|+++.+.+ ...+.++..|+
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~----~~~la~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~ 162 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAM----CAVLARAVG--SSGKVFAYEKREEFAKLAESNLTKWGL 162 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHTT--TTCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHH----HHHHHHHhC--CCcEEEEEECCHHHHHHHHHHHHHcCC
Confidence 4566666544555899999999853 333443311 2358999998876 33444555676
No 164
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=35.07 E-value=35 Score=30.06 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=54.3
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccCC-
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLGV- 261 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~~- 261 (434)
-+|+|+|.+.|.--. .|+.+- |+..+||+|+.+.+ ...+.++..|+. .+|.. .+..+.. + .+.-
T Consensus 66 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~-~-~~~~~ 135 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL--SPAKDTL-A-ELIHA 135 (225)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHH-H-HHHTT
T ss_pred CEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--CCHHHHH-H-Hhhhc
Confidence 389999999886432 344332 23579999999876 445556666775 55543 2221110 0 0100
Q ss_pred ---CCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEec
Q 013903 262 ---RPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 262 ---~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
..=+.++++.. ......+|+.+ +.|+|.-+++++.
T Consensus 136 ~~~~~fD~v~~~~~-------~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 136 GQAWQYDLIYIDAD-------KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp TCTTCEEEEEECSC-------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCccEEEECCC-------HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 11134443321 12234555544 7889998888753
No 165
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=34.36 E-value=1.2e+02 Score=28.81 Aligned_cols=104 Identities=10% Similarity=0.003 Sum_probs=52.1
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH---HH----HHHc-CCceEEeeeccCccccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA---DF----AMSL-GLPFDFNPLEGKIGNIIDVSQ 258 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~---~f----A~sl-gvpFeF~~V~~~~e~l~~~~~ 258 (434)
.-.|+|+|.|.|. +...|+.+ +|..+||+|+.+.+.+. ++ +..+ +-.++|. ..+..+. +..
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~--~~~ 164 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGDGLAF--VRQ 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHH--HHS
T ss_pred CCeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHH--HHh
Confidence 3579999999886 45556654 34579999998875221 11 1111 1223433 2222111 000
Q ss_pred cCCCCCceEEEecccccccccCCC--hHHHHHHH-HhcCCCEEEEEec
Q 013903 259 LGVRPGETIVVHWMHHCLYDITGS--DLGTLRML-TLLRPKLITIVEQ 303 (434)
Q Consensus 259 L~~~~~EaLaVN~~~h~l~~~~~~--~~~~L~~i-r~L~P~vvv~vE~ 303 (434)
+.-..=+++++|...+... ... ...|++.+ +.|+|.-++++..
T Consensus 165 ~~~~~fDvIi~d~~~~~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTDPAGP--ASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp SCTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCceeEEEECCCCcccc--chhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 0011125777775432110 111 15677655 7889988777754
No 166
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=34.21 E-value=1.4e+02 Score=25.47 Aligned_cols=39 Identities=18% Similarity=-0.023 Sum_probs=25.9
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHH
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLAD 232 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~ 232 (434)
+.-+|+|+|.|.|.- ...|+.+ |+. ++|||+.+...+..
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s~~~~~~ 80 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYSSVVVAA 80 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESCHHHHHH
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCCHHHHHH
Confidence 345799999998853 3344444 333 89999988764433
No 167
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=32.91 E-value=71 Score=29.26 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=32.0
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHH
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLAD 232 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~ 232 (434)
+.|++.+.-...-+|+|+|.|.|. +...|+.+. -++|||+.+.+.+..
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~-----~~v~~vD~~~~~~~~ 67 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC-----NFVTAIEIDHKLCKT 67 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEECSCHHHHHH
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC-----CeEEEEECCHHHHHH
Confidence 445555554445689999999986 444555542 489999988864433
No 168
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=32.18 E-value=2.1e+02 Score=27.03 Aligned_cols=126 Identities=11% Similarity=0.072 Sum_probs=61.5
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHH--H-HHHHHHc-----C-CceEEeeeccCcccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSER--L-ADFAMSL-----G-LPFDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~r--L-~~fA~sl-----g-vpFeF~~V~~~~e~l~~~~ 257 (434)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+.+. + .++.... + -.++|. ..+..+.
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~--~~D~~~~---- 150 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH---KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGVNF---- 150 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC---TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE--CSCSCC-----
T ss_pred CCEEEEEeCChhH----HHHHHHhC---CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEE--EChHHHH----
Confidence 3489999999885 45566654 346799999987651 1 2222211 1 122222 1111111
Q ss_pred ccCC--CCCceEEEecccccccccCCC--hHHHHHHH-HhcCCCEEEEEecCCCCCCChhHHHHHHHHHHHHHHHHhh
Q 013903 258 QLGV--RPGETIVVHWMHHCLYDITGS--DLGTLRML-TLLRPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDALG 330 (434)
Q Consensus 258 ~L~~--~~~EaLaVN~~~h~l~~~~~~--~~~~L~~i-r~L~P~vvv~vE~ea~~n~~F~~RF~eaL~yYsalFDsLe 330 (434)
+.- ..=+++++|...+. ..... ...|++.+ +.|+|.-++++..+..... .+.+.+.+......|....
T Consensus 151 -l~~~~~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~--~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 151 -VNQTSQTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQ--QEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp ---CCCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSC--CHHHHHHHHHHHHHCSEEE
T ss_pred -HhhcCCCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEecCCcccc--hHHHHHHHHHHHHHCCCeE
Confidence 111 11256777643221 00111 15677654 7789998888754332221 2344444444555565544
No 169
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=30.60 E-value=94 Score=27.58 Aligned_cols=51 Identities=16% Similarity=0.108 Sum_probs=34.8
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEee
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFNP 245 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~~ 245 (434)
..-+|+|+|.|.|. +...|+.+ | .++|||+.+.+ ...+-++..|+ ..+|..
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDIDPVKIALARNNAEVYGIADKIEFIC 133 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCCEEEECccccCH----HHHHHHHc--C---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEE
Confidence 34579999999985 33444544 2 68999999876 44555677787 455553
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=30.04 E-value=83 Score=28.37 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=30.4
Q ss_pred HHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 178 IFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 178 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
+++.+.+.+...|+|+|.|.|. +.-.|+.+- ..|..+||||+.+.+
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis~~ 88 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVDPA 88 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESCHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECCHH
Confidence 3444555567899999999994 333444331 113579999998876
No 171
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=29.69 E-value=84 Score=28.94 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=35.2
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHH---HHHHHHHc-CCc-eEEe
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSER---LADFAMSL-GLP-FDFN 244 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~r---L~~fA~sl-gvp-FeF~ 244 (434)
.+++.+.-...-.|+|+|.+.|.--..|.+.+ .|..++|||+.+.+. ..+.++.. |++ .+|.
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~------~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~ 167 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL------NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS 167 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH------TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc------CCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 55555554455689999999886444444433 123589999988763 33444444 642 5554
No 172
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=28.88 E-value=1.5e+02 Score=28.69 Aligned_cols=110 Identities=8% Similarity=0.013 Sum_probs=56.8
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHHc--CC---ceEEeeeccCccccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMSL--GL---PFDFNPLEGKIGNIIDVSQ 258 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~sl--gv---pFeF~~V~~~~e~l~~~~~ 258 (434)
.-+|+|+|.|.|. +...|+.+ +|..+||+|+.+.+.+ .++...+ |+ .++|.. .+..+. ...
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~D~~~~--l~~ 189 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI--GDGVAF--LKN 189 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE--SCHHHH--HHT
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE--CCHHHH--HHh
Confidence 3589999999886 45566655 3467999999887622 1222211 22 344432 221111 000
Q ss_pred cCCCCCceEEEecccccccccCC-ChHHHHHHH-HhcCCCEEEEEecCCCCC
Q 013903 259 LGVRPGETIVVHWMHHCLYDITG-SDLGTLRML-TLLRPKLITIVEQDLSHG 308 (434)
Q Consensus 259 L~~~~~EaLaVN~~~h~l~~~~~-~~~~~L~~i-r~L~P~vvv~vE~ea~~n 308 (434)
+.-..=+++++|...+. ..... ....|++.+ +.|+|.-++++..+....
T Consensus 190 ~~~~~fDlIi~d~~~p~-~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPI-GPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp SCTTCEEEEEECCCCTT-SGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred ccCCCccEEEECCCCcc-CcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 10011256777653211 10001 024666554 778999988886544333
No 173
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=28.22 E-value=1.2e+02 Score=26.44 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=30.2
Q ss_pred HHHhhcC--CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 177 AIFQALD--GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 177 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
.+++.+. -...-+|+|+|.+.|..-..|.+.+ + |..++|+|+.+..
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~----~--~~~~v~~vD~s~~ 113 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV----G--CTGKVIGIDHIKE 113 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH----C--TTCEEEEEESCHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh----C--CCcEEEEEeCCHH
Confidence 4555554 2344589999999887544444433 1 3458999998876
No 174
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=28.09 E-value=2.3e+02 Score=24.54 Aligned_cols=96 Identities=14% Similarity=0.148 Sum_probs=50.9
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCC-
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG- 264 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~- 264 (434)
+.-.|+|+|.|.|.--. .|+.+ ++ ++|||+.+.+.+....+.+ -..+|.. .++.++ .. ++
T Consensus 40 ~~~~vLdiG~G~G~~~~----~l~~~--~~---~v~~~D~s~~~~~~a~~~~-~~~~~~~--~d~~~~------~~-~~~ 100 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLE----HFTKE--FG---DTAGLELSEDMLTHARKRL-PDATLHQ--GDMRDF------RL-GRK 100 (239)
T ss_dssp TCCEEEEETCTTSHHHH----HHHHH--HS---EEEEEESCHHHHHHHHHHC-TTCEEEE--CCTTTC------CC-SSC
T ss_pred CCCeEEEecccCCHHHH----HHHHh--CC---cEEEEeCCHHHHHHHHHhC-CCCEEEE--CCHHHc------cc-CCC
Confidence 44689999999986433 33333 22 8999998876544333332 2233332 222222 12 22
Q ss_pred -ceEE-Ee-cccccccccCCChHHHHHHH-HhcCCCEEEEEe
Q 013903 265 -ETIV-VH-WMHHCLYDITGSDLGTLRML-TLLRPKLITIVE 302 (434)
Q Consensus 265 -EaLa-VN-~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE 302 (434)
+.++ .+ .++|+ .+ +.....+|+.+ +.|+|.-.++++
T Consensus 101 ~D~v~~~~~~~~~~-~~-~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 101 FSAVVSMFSSVGYL-KT-TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp EEEEEECTTGGGGC-CS-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CcEEEEcCchHhhc-CC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2333 12 33442 11 12345666655 778999888775
No 175
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=27.69 E-value=1.6e+02 Score=27.79 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=32.4
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
+.|++++.-...-+|+|+|.|.|.-=..|.+....+ ..++|||+.+.+
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~-----~~~V~avDid~~ 79 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATP-----GSPLHAVELDRD 79 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBT-----TBCEEEEECCHH
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCc-----CCeEEEEECCHH
Confidence 346666665556689999999998655555442110 356999998875
No 176
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=27.68 E-value=76 Score=28.70 Aligned_cols=102 Identities=11% Similarity=-0.029 Sum_probs=53.2
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCC
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVR 262 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~ 262 (434)
.--+|+|+|.|.|. ....++++. |. ++|||+.+.+ +..+.++..+....|.. ..++++. . .+.-.
T Consensus 60 ~G~rVLdiG~G~G~----~~~~~~~~~---~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~--~~a~~~~-~-~~~~~ 127 (236)
T 3orh_A 60 KGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK--GLWEDVA-P-TLPDG 127 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHTTSC---EE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE--SCHHHHG-G-GSCTT
T ss_pred CCCeEEEECCCccH----HHHHHHHhC---Cc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe--ehHHhhc-c-ccccc
Confidence 34579999998884 334455442 22 7899999876 55566666776666543 2233321 1 11111
Q ss_pred CCceEEEeccc--ccccccCCChHHHHH-HHHhcCCCEEEE
Q 013903 263 PGETIVVHWMH--HCLYDITGSDLGTLR-MLTLLRPKLITI 300 (434)
Q Consensus 263 ~~EaLaVN~~~--h~l~~~~~~~~~~L~-~ir~L~P~vvv~ 300 (434)
.=+.+.+.... ..+.. ......+++ ..|-|+|.-+.+
T Consensus 128 ~FD~i~~D~~~~~~~~~~-~~~~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 128 HFDGILYDTYPLSEETWH-THQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp CEEEEEECCCCCBGGGTT-THHHHHHHHTHHHHEEEEEEEE
T ss_pred CCceEEEeeeecccchhh-hcchhhhhhhhhheeCCCCEEE
Confidence 11333333110 00111 112456676 457799987665
No 177
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=27.07 E-value=54 Score=27.93 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=26.1
Q ss_pred EEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHH
Q 013903 189 HIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLAD 232 (434)
Q Consensus 189 HIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~ 232 (434)
.|+|+|.|.|. +...|+.+. ++|||+.+.+.+..
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDLNIRALES 59 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEESCHHHHHT
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEECCHHHHhc
Confidence 89999999984 555666552 99999998875544
No 178
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=26.88 E-value=1.8e+02 Score=25.65 Aligned_cols=38 Identities=8% Similarity=-0.006 Sum_probs=25.8
Q ss_pred CeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH
Q 013903 186 DCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL 230 (434)
Q Consensus 186 ~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL 230 (434)
..-.|+|+|.|.|.- ...|+.+-+ .-++|||+.+.+.+
T Consensus 74 ~~~~VLDlGcG~G~~----~~~la~~~~---~~~v~gvD~s~~~~ 111 (230)
T 1fbn_A 74 RDSKILYLGASAGTT----PSHVADIAD---KGIVYAIEYAPRIM 111 (230)
T ss_dssp TTCEEEEESCCSSHH----HHHHHHHTT---TSEEEEEESCHHHH
T ss_pred CCCEEEEEcccCCHH----HHHHHHHcC---CcEEEEEECCHHHH
Confidence 345799999998863 334444422 34899999988744
No 179
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=26.37 E-value=1.5e+02 Score=27.67 Aligned_cols=33 Identities=3% Similarity=-0.028 Sum_probs=25.1
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
-+|+|+|.|.|. +...++.+ |.-+||+|+.+.+
T Consensus 77 ~~VLdiG~G~G~----~~~~l~~~----~~~~v~~vDid~~ 109 (281)
T 1mjf_A 77 KRVLVIGGGDGG----TVREVLQH----DVDEVIMVEIDED 109 (281)
T ss_dssp CEEEEEECTTSH----HHHHHTTS----CCSEEEEEESCHH
T ss_pred CeEEEEcCCcCH----HHHHHHhC----CCCEEEEEECCHH
Confidence 479999999884 55566665 2469999998876
No 180
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.36 E-value=1.9e+02 Score=23.06 Aligned_cols=79 Identities=8% Similarity=-0.061 Sum_probs=41.7
Q ss_pred CceEEEEeecCChH---HHHHHHHHcCCceEEeeeccCccccccccccCCCCCceEEEecccccccccCCChHHHHHHHH
Q 013903 215 IRSMRITGFGSSSE---RLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPGETIVVHWMHHCLYDITGSDLGTLRMLT 291 (434)
Q Consensus 215 PP~LRITgI~~~~~---rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~ir 291 (434)
...+||--|+.+.. .|...-+..|--+....+. +.++. ...+.-.+=+.++++... .+ .+...+++.||
T Consensus 18 ~~m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~-~~~~a--l~~l~~~~~dlii~D~~l---~~--~~g~~~~~~l~ 89 (150)
T 4e7p_A 18 GSHMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAK-NGQEA--IQLLEKESVDIAILDVEM---PV--KTGLEVLEWIR 89 (150)
T ss_dssp --CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEES-SHHHH--HHHHTTSCCSEEEECSSC---SS--SCHHHHHHHHH
T ss_pred CCccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEC-CHHHH--HHHhhccCCCEEEEeCCC---CC--CcHHHHHHHHH
Confidence 34799999998875 5555555555334443332 22222 112222223466665321 11 23467899999
Q ss_pred hcCCCEEEEE
Q 013903 292 LLRPKLITIV 301 (434)
Q Consensus 292 ~L~P~vvv~v 301 (434)
+..|.+-+++
T Consensus 90 ~~~~~~~ii~ 99 (150)
T 4e7p_A 90 SEKLETKVVV 99 (150)
T ss_dssp HTTCSCEEEE
T ss_pred HhCCCCeEEE
Confidence 8877654443
No 181
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=26.15 E-value=2.5e+02 Score=24.36 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=46.3
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCccccccccccCCCCC--
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIIDVSQLGVRPG-- 264 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~~~~L~~~~~-- 264 (434)
.-+|+|+|.|.|.- ...|+.+ ||++.+.+.+ +.|+..++. |.. ..+.++ ...++
T Consensus 48 ~~~vLDiG~G~G~~----~~~l~~~---------~~vD~s~~~~-~~a~~~~~~--~~~--~d~~~~------~~~~~~f 103 (219)
T 1vlm_A 48 EGRGVEIGVGTGRF----AVPLKIK---------IGVEPSERMA-EIARKRGVF--VLK--GTAENL------PLKDESF 103 (219)
T ss_dssp SSCEEEETCTTSTT----HHHHTCC---------EEEESCHHHH-HHHHHTTCE--EEE--CBTTBC------CSCTTCE
T ss_pred CCcEEEeCCCCCHH----HHHHHHH---------hccCCCHHHH-HHHHhcCCE--EEE--cccccC------CCCCCCe
Confidence 34799999998863 3345544 8998877544 344444443 322 222222 12222
Q ss_pred ceEEEec-ccccccccCCChHHHHHHH-HhcCCCEEEEE
Q 013903 265 ETIVVHW-MHHCLYDITGSDLGTLRML-TLLRPKLITIV 301 (434)
Q Consensus 265 EaLaVN~-~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~v 301 (434)
+.++.+. ++| + .....+|+.+ +.|+|.-.+++
T Consensus 104 D~v~~~~~l~~-~----~~~~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 104 DFALMVTTICF-V----DDPERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp EEEEEESCGGG-S----SCHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEcchHhh-c----cCHHHHHHHHHHHcCCCcEEEE
Confidence 3444443 334 2 2345666554 77899865554
No 182
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=25.85 E-value=3.5e+02 Score=27.01 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=41.2
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEE
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDF 243 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF 243 (434)
+.+.+.+.+.-...-+|+|+|.+.|.-=..|.+.+ +..-+||+++.+.. .+.+-++.+|++ .+|
T Consensus 247 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~------~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~ 314 (450)
T 2yxl_A 247 ASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELM------KNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKP 314 (450)
T ss_dssp HHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHT------TTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEE
T ss_pred hhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHc------CCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEE
Confidence 34455555554444589999999987544444333 12358999999877 556667778873 444
No 183
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=25.00 E-value=1.4e+02 Score=28.38 Aligned_cols=61 Identities=16% Similarity=0.046 Sum_probs=40.0
Q ss_pred HhHHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc
Q 013903 174 ANQAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP 240 (434)
Q Consensus 174 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp 240 (434)
+-+.+.+.+.-...-+|+|+|.+.|.--..|.+.+ ++.-+|||++.+.. .+.+-++..|++
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s~~~l~~a~~~~~~~g~~ 169 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVDENRLRETRLNLSRLGVL 169 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCCHHHHHHHHHHHHHhCCC
Confidence 44555556554445589999999987544443333 12458999999877 555666777874
No 184
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=24.94 E-value=71 Score=28.04 Aligned_cols=100 Identities=15% Similarity=0.164 Sum_probs=54.3
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccC-
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLG- 260 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~- 260 (434)
.-+|+|+|.+.|.-- ..|+.+- |+..++|+|+.+.+ ...+.++..|++ .+|.. .+..+.. + .+.
T Consensus 59 ~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~-~-~~~~ 128 (223)
T 3duw_A 59 ARNILEIGTLGGYST----IWLARGL--SSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT--GLALDSL-Q-QIEN 128 (223)
T ss_dssp CSEEEEECCTTSHHH----HHHHTTC--CSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHH-H-HHHH
T ss_pred CCEEEEecCCccHHH----HHHHHhC--CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHH-H-HHHh
Confidence 347999999988542 2344432 33469999998876 444555666773 55543 2211110 0 010
Q ss_pred --CCCCceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEec
Q 013903 261 --VRPGETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVEQ 303 (434)
Q Consensus 261 --~~~~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE~ 303 (434)
..+=+.++++... .....+|+. .+.|+|.-+++++.
T Consensus 129 ~~~~~fD~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 129 EKYEPFDFIFIDADK-------QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp TTCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred cCCCCcCEEEEcCCc-------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 0112355544221 123455554 57889999888754
No 185
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=24.64 E-value=1.1e+02 Score=27.30 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=28.9
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSL 237 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~sl 237 (434)
.-.|+|+|.|.|. +...+ +.+-+ .-++|||+.+.+ .+.+.|+..
T Consensus 58 g~~VLDlGcGtG~-~~~~l---a~~~~---~~~V~gvD~s~~~l~~~~~~a~~~ 104 (210)
T 1nt2_A 58 DERVLYLGAASGT-TVSHL---ADIVD---EGIIYAVEYSAKPFEKLLELVRER 104 (210)
T ss_dssp SCEEEEETCTTSH-HHHHH---HHHTT---TSEEEEECCCHHHHHHHHHHHHHC
T ss_pred CCEEEEECCcCCH-HHHHH---HHHcC---CCEEEEEECCHHHHHHHHHHHhcC
Confidence 3479999999997 33333 33221 238999999986 455667654
No 186
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=24.55 E-value=2.5e+02 Score=27.28 Aligned_cols=104 Identities=15% Similarity=0.087 Sum_probs=54.7
Q ss_pred CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCC--ceEEeeeccCcccccccccc
Q 013903 185 ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGL--PFDFNPLEGKIGNIIDVSQL 259 (434)
Q Consensus 185 ~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgv--pFeF~~V~~~~e~l~~~~~L 259 (434)
...-.|+|.|.|.|. +.-.++.+.. .-+|+|++.+.. ...+-++..|+ ..+|.. .+..++ ..
T Consensus 216 ~~~~~vLD~gCGsG~----~~i~~a~~~~---~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~--~D~~~~-~~--- 282 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGT----ILIELALRRY---SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQ--GDATQL-SQ--- 282 (373)
T ss_dssp CCSCCEEETTCTTCH----HHHHHHHTTC---CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEE--CCGGGG-GG---
T ss_pred CCCCEEEEccCcCcH----HHHHHHHhCC---CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE--CChhhC-Cc---
Confidence 344579999999985 3344444421 237999998876 33444566777 455543 222232 11
Q ss_pred CCCCCceEEEecccccccccCCC----hHHHHHHHHh-cCCCEEEEE
Q 013903 260 GVRPGETIVVHWMHHCLYDITGS----DLGTLRMLTL-LRPKLITIV 301 (434)
Q Consensus 260 ~~~~~EaLaVN~~~h~l~~~~~~----~~~~L~~ir~-L~P~vvv~v 301 (434)
....-++++.|-..+........ -..+++.++. |++.+++++
T Consensus 283 ~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 11222577777432211111111 1567776665 666666664
No 187
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=23.90 E-value=1.2e+02 Score=26.71 Aligned_cols=43 Identities=7% Similarity=0.133 Sum_probs=28.5
Q ss_pred HHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 177 AIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
.|++.+.-...-+|+|+|.|.|.--. .|+.+. -++|||+.+.+
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~----~l~~~~-----~~v~~vD~~~~ 103 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTA----LIAEIV-----DKVVSVEINEK 103 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHH----HHHHHS-----SEEEEEESCHH
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHH----HHHHHc-----CEEEEEeCCHH
Confidence 45555544445589999999887433 333331 48999998876
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=23.78 E-value=1.5e+02 Score=27.09 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=53.7
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccC--
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLG-- 260 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~-- 260 (434)
-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+.+ ...+..+..|+. .+|.. .+..+.. + .+.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l-~-~l~~~ 150 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAI------PEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVL-D-EMIKD 150 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHS------CTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHH-H-HHHHS
T ss_pred CEEEEeCCCcCHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE--CCHHHHH-H-HHHhc
Confidence 379999998887433343433 22359999998876 444555667773 44442 2221110 0 010
Q ss_pred ---CCCCceEEEecccccccccCCChHHHHH-HHHhcCCCEEEEEec
Q 013903 261 ---VRPGETIVVHWMHHCLYDITGSDLGTLR-MLTLLRPKLITIVEQ 303 (434)
Q Consensus 261 ---~~~~EaLaVN~~~h~l~~~~~~~~~~L~-~ir~L~P~vvv~vE~ 303 (434)
-.+=+.++++.- ......+|+ ..+-|+|.-+++++.
T Consensus 151 ~~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 151 EKNHGSYDFIFVDAD-------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GGGTTCBSEEEECSC-------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred cCCCCCEEEEEEcCc-------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 011235554421 122345554 457889998888754
No 189
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=23.26 E-value=1.3e+02 Score=27.30 Aligned_cols=59 Identities=7% Similarity=0.151 Sum_probs=36.8
Q ss_pred CCCccchhHhHhHHHHhhcC-CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH
Q 013903 164 CPLIKFSHFTANQAIFQALD-GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA 231 (434)
Q Consensus 164 sP~~kfa~~tANqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~ 231 (434)
.||+.=+.+---+ +|+.+. ..+.-.|+|+|.|.|. +...|+.+ |. -++|||+.+.+.|.
T Consensus 15 ~~yvsrg~~kL~~-~L~~~~~~~~g~~VLDiGcGtG~----~t~~la~~--g~--~~V~gvDis~~ml~ 74 (232)
T 3opn_A 15 LRYVSRGGLKLEK-ALKEFHLEINGKTCLDIGSSTGG----FTDVMLQN--GA--KLVYALDVGTNQLA 74 (232)
T ss_dssp CCSSSTTHHHHHH-HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHT--TC--SEEEEECSSCCCCC
T ss_pred CCccCCcHHHHHH-HHHHcCCCCCCCEEEEEccCCCH----HHHHHHhc--CC--CEEEEEcCCHHHHH
Confidence 4676666554433 344443 2234579999999986 45556655 22 28999998876443
No 190
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=23.25 E-value=2.3e+02 Score=26.86 Aligned_cols=128 Identities=9% Similarity=0.039 Sum_probs=60.8
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHH----c-CCceEEeeeccCccccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMS----L-GLPFDFNPLEGKIGNIIDVSQ 258 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~s----l-gvpFeF~~V~~~~e~l~~~~~ 258 (434)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+.+.+ .++... + +-.+++. ..+..+... .
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~--~~Da~~~l~--~ 164 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKH---PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH--VGDGFEFMK--Q 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHHHHHH--T
T ss_pred CCEEEEECCCchH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHHHHHh--h
Confidence 3589999999885 45566655 2467999999887622 111111 1 1123333 221111100 0
Q ss_pred cCCCCCceEEEecccccccccCCChHHHHHHH-HhcCCCEEEEEecCCCCCCChhHHHHHHHHHHHHHHHH
Q 013903 259 LGVRPGETIVVHWMHHCLYDITGSDLGTLRML-TLLRPKLITIVEQDLSHGGSFLGRFVEALHYYSALFDA 328 (434)
Q Consensus 259 L~~~~~EaLaVN~~~h~l~~~~~~~~~~L~~i-r~L~P~vvv~vE~ea~~n~~F~~RF~eaL~yYsalFDs 328 (434)
.-..=+++++|...+.-.........|++.+ +.|+|.-+++++....... .+.+.....+...+|..
T Consensus 165 -~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--~~~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 165 -NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--LDLIKEMRQFCQSLFPV 232 (304)
T ss_dssp -CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--HHHHHHHHHHHHHHCSE
T ss_pred -CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--hHHHHHHHHHHHHhCCC
Confidence 0112256777754321100001124566554 7789999888865433222 12233333444455543
No 191
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=23.23 E-value=2.5e+02 Score=26.80 Aligned_cols=104 Identities=8% Similarity=0.051 Sum_probs=54.5
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHH---HHHHHc--CC---ceEEeeeccCccccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLA---DFAMSL--GL---PFDFNPLEGKIGNIIDVSQ 258 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~---~fA~sl--gv---pFeF~~V~~~~e~l~~~~~ 258 (434)
.-+|+|+|.|.|. +...++.+ +|..+||+|+.+.+.+. +.+..+ ++ .++|. ..+..+... .
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~--~~D~~~~l~--~ 185 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKY---KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDASKFLE--N 185 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTC---TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCHHHHHH--H
T ss_pred CCEEEEEcCCccH----HHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--EccHHHHHh--h
Confidence 3579999999886 45566654 34579999998876322 222211 11 23333 222111100 0
Q ss_pred cCCCCCceEEEecccccccccCCC--hHHHHHHH-HhcCCCEEEEEecC
Q 013903 259 LGVRPGETIVVHWMHHCLYDITGS--DLGTLRML-TLLRPKLITIVEQD 304 (434)
Q Consensus 259 L~~~~~EaLaVN~~~h~l~~~~~~--~~~~L~~i-r~L~P~vvv~vE~e 304 (434)
.-..=+++++|...+. .. ... ...|++.+ +.|+|.-+++++..
T Consensus 186 -~~~~fDvIi~d~~~p~-~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 186 -VTNTYDVIIVDSSDPI-GP-AETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp -CCSCEEEEEEECCCSS-SG-GGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -cCCCceEEEECCcCCC-Cc-chhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 0011256777753211 00 111 15677655 77899999888754
No 192
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=23.02 E-value=4.4e+02 Score=24.12 Aligned_cols=91 Identities=11% Similarity=0.102 Sum_probs=50.4
Q ss_pred EEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc-eEEeeeccCccccccccccCCCCC
Q 013903 189 HIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP-FDFNPLEGKIGNIIDVSQLGVRPG 264 (434)
Q Consensus 189 HIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp-FeF~~V~~~~e~l~~~~~L~~~~~ 264 (434)
.|+|+|.|.|.--..+ |.+.+ .-++|||+.+.+ .+.+-++..|++ .+| +..+..++ .. -..=
T Consensus 122 ~VLDlgcG~G~~s~~l----a~~~~---~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~--~~~d~~~~-~~----~~~~ 187 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPL----AKYSK---PKLVYAIEKNPTAYHYLCENIKLNKLNNVIP--ILADNRDV-EL----KDVA 187 (272)
T ss_dssp EEEETTCTTTTTHHHH----HHHTC---CSEEEEEECCHHHHHHHHHHHHHTTCSSEEE--EESCGGGC-CC----TTCE
T ss_pred EEEEecCcCCHHHHHH----HHhCC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEE--EECChHHc-Cc----cCCc
Confidence 6899999998743333 33311 358999999876 445556666763 443 33333222 11 0111
Q ss_pred ceEEEecccccccccCCChHHHH-HHHHhcCCCEEEEE
Q 013903 265 ETIVVHWMHHCLYDITGSDLGTL-RMLTLLRPKLITIV 301 (434)
Q Consensus 265 EaLaVN~~~h~l~~~~~~~~~~L-~~ir~L~P~vvv~v 301 (434)
+.+++|... ....+| ..++.|+|.-++++
T Consensus 188 D~Vi~d~p~--------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 188 DRVIMGYVH--------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp EEEEECCCS--------SGGGGHHHHHHHEEEEEEEEE
T ss_pred eEEEECCcc--------cHHHHHHHHHHHcCCCCEEEE
Confidence 455555321 233444 45788999766654
No 193
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=22.05 E-value=2.2e+02 Score=25.44 Aligned_cols=99 Identities=12% Similarity=0.029 Sum_probs=53.3
Q ss_pred eEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH---HHHHHHHHcCCc--eEEeeeccCccccccccccC--
Q 013903 188 VHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE---RLADFAMSLGLP--FDFNPLEGKIGNIIDVSQLG-- 260 (434)
Q Consensus 188 VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~---rL~~fA~slgvp--FeF~~V~~~~e~l~~~~~L~-- 260 (434)
-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+.+ ...+..+..|+. .+|.. .+..++. ..+.
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l--~~l~~~ 141 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSI------PDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE--SDAMLAL--DNLLQG 141 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHS------CTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHH--HHHHHS
T ss_pred CEEEEeCCCCCHHHHHHHHhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHH--HHHHhc
Confidence 379999999887433343333 22459999998876 444555667774 45542 2111110 0110
Q ss_pred ---CCCCceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEEec
Q 013903 261 ---VRPGETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIVEQ 303 (434)
Q Consensus 261 ---~~~~EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~vE~ 303 (434)
-.+=+.+.++.- ......+|+. .+.|+|.-+++++.
T Consensus 142 ~~~~~~fD~I~~d~~-------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 142 QESEGSYDFGFVDAD-------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCTTCEEEEEECSC-------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCcCEEEECCc-------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 011134444321 1123455554 47789998888754
No 194
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=21.93 E-value=2.9e+02 Score=25.61 Aligned_cols=103 Identities=7% Similarity=-0.015 Sum_probs=54.2
Q ss_pred eeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHH-c---C-----CceEEeeeccCcccccccc
Q 013903 187 CVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMS-L---G-----LPFDFNPLEGKIGNIIDVS 257 (434)
Q Consensus 187 ~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~s-l---g-----vpFeF~~V~~~~e~l~~~~ 257 (434)
.-+|+|+|.|.|. +...++.+ +|..+||+|+.+.+.+ +.|+. + + -.+++. ..+..+.. .
T Consensus 79 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~~i-~~a~~~~~~~~~~~~~~~v~~~--~~D~~~~l-~- 146 (283)
T 2i7c_A 79 PKNVLVVGGGDGG----IIRELCKY---KSVENIDICEIDETVI-EVSKIYFKNISCGYEDKRVNVF--IEDASKFL-E- 146 (283)
T ss_dssp CCEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESCHHHH-HHHHHHCTTTSGGGGSTTEEEE--ESCHHHHH-H-
T ss_pred CCeEEEEeCCcCH----HHHHHHHc---CCCCEEEEEECCHHHH-HHHHHHhHHhccccCCCcEEEE--ECChHHHH-H-
Confidence 3589999999885 55566654 3467999999887622 22222 2 1 123332 22111110 0
Q ss_pred ccCCCCCceEEEecccccccccCCCh--HHHHHHH-HhcCCCEEEEEecC
Q 013903 258 QLGVRPGETIVVHWMHHCLYDITGSD--LGTLRML-TLLRPKLITIVEQD 304 (434)
Q Consensus 258 ~L~~~~~EaLaVN~~~h~l~~~~~~~--~~~L~~i-r~L~P~vvv~vE~e 304 (434)
. .-..=++++++...+... .... ..|++.+ +.|+|.-++++...
T Consensus 147 ~-~~~~fD~Ii~d~~~~~~~--~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 147 N-VTNTYDVIIVDSSDPIGP--AETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp H-CCSCEEEEEEECCCTTTG--GGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred h-CCCCceEEEEcCCCCCCc--chhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 0 011125677765322111 1111 5777665 77899988887543
No 195
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=21.92 E-value=1.7e+02 Score=25.56 Aligned_cols=50 Identities=10% Similarity=-0.005 Sum_probs=30.0
Q ss_pred HHHhhcC--CCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChH
Q 013903 177 AIFQALD--GADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSE 228 (434)
Q Consensus 177 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~ 228 (434)
.+++.+. -...-+|+|+|.+.|..-..|.+.+..+ ..|..++|+|+.+.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~~~~v~~vD~~~~ 120 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENKNSYVIGLERVKD 120 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCTTCEEEEEESCHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCCCCEEEEEeCCHH
Confidence 4455552 2234589999999986444333332111 124569999998876
No 196
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=21.78 E-value=1e+02 Score=26.68 Aligned_cols=89 Identities=11% Similarity=0.020 Sum_probs=47.9
Q ss_pred HHHhhcCC-CCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHHHHHHHHcCCceEEeeeccCcccccc
Q 013903 177 AIFQALDG-ADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERLADFAMSLGLPFDFNPLEGKIGNIID 255 (434)
Q Consensus 177 AILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL~~fA~slgvpFeF~~V~~~~e~l~~ 255 (434)
.|++.+.. ...-+|+|+|.|.|.- ...|+ .++|||+.+.. ++.|. ..++.++
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s~~---------~~~~~----~~d~~~~-- 109 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLASL---------DPRVT----VCDMAQV-- 109 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESSCS---------STTEE----ESCTTSC--
T ss_pred HHHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCCCC---------CceEE----EeccccC--
Confidence 35555432 2346899999998863 23332 47999997765 33332 1222222
Q ss_pred ccccCCCCC--ceEEEecccccccccCCChHHHHHH-HHhcCCCEEEEE
Q 013903 256 VSQLGVRPG--ETIVVHWMHHCLYDITGSDLGTLRM-LTLLRPKLITIV 301 (434)
Q Consensus 256 ~~~L~~~~~--EaLaVN~~~h~l~~~~~~~~~~L~~-ir~L~P~vvv~v 301 (434)
...++ ++++.+..+|. .....+|+. .+-|+|.-.+++
T Consensus 110 ----~~~~~~fD~v~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 110 ----PLEDESVDVAVFCLSLMG-----TNIRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp ----SCCTTCEEEEEEESCCCS-----SCHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CCCCCCEeEEEEehhccc-----cCHHHHHHHHHHhCCCCeEEEE
Confidence 22222 45555544341 335566654 467899865544
No 197
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=20.88 E-value=1e+02 Score=26.71 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHhcccCCCCCCc
Q 013903 75 LRLLGLLLQCAECVAMDNLDDATDLLPEISELSSPFVSS 113 (434)
Q Consensus 75 ~~L~~LLl~CAeAV~~gd~~~A~~lL~~l~~~aSp~Gd~ 113 (434)
-.+-+-|-+|+++++.||...|+.||..-. +..|+||-
T Consensus 56 ~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL 93 (137)
T 2ksn_A 56 KEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGAL 93 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCS
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcH
Confidence 357889999999999999999999997654 55577773
No 198
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=20.40 E-value=54 Score=32.96 Aligned_cols=26 Identities=35% Similarity=0.409 Sum_probs=18.8
Q ss_pred HHHhhcCCCCeeEEEEcccCC--ccccH
Q 013903 177 AIFQALDGADCVHIIDLDIMQ--GLQWP 202 (434)
Q Consensus 177 AILEA~~g~~~VHIIDfgI~~--G~QWp 202 (434)
||..+.+..+||=|||+|+.| |.|+.
T Consensus 153 Aa~~l~~~~~RV~ivD~DvHHGnGtq~i 180 (376)
T 4a69_A 153 GILELLKYHPRVLYIDIDIHHGDGVQEA 180 (376)
T ss_dssp HHHHHTTTCSCEEEEECSSSCCHHHHHH
T ss_pred HHHHHHHhCCcEEEEeccCCCCcchhhH
Confidence 344555666999999999966 56753
No 199
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=20.23 E-value=4.3e+02 Score=22.98 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=34.1
Q ss_pred HHHHhhcCCCCeeEEEEcccCCccccHHHHHHHhcCCCCCceEEEEeecCChHHH---HHHHHHcCC
Q 013903 176 QAIFQALDGADCVHIIDLDIMQGLQWPGLFHILVSRSKKIRSMRITGFGSSSERL---ADFAMSLGL 239 (434)
Q Consensus 176 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLa~R~~gPP~LRITgI~~~~~rL---~~fA~slgv 239 (434)
..|++.+.-...-+|+|+|.|.|.- ...|+.+ + .++++++.+.+++ .+.++..|+
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~----~~~l~~~-~----~~v~~vD~~~~~~~~a~~~~~~~~~ 138 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGAL----LAVLSEV-A----GEVWTFEAVEEFYKTAQKNLKKFNL 138 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHH----HHHHHHH-S----SEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHH----HHHHHHh-C----CEEEEEecCHHHHHHHHHHHHHcCC
Confidence 3566666544455899999988753 3334444 2 3899999887633 333444565
Done!