Query 013908
Match_columns 434
No_of_seqs 166 out of 752
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 19:21:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jhn_A Calnexin; jelly-roll, b 100.0 1E-143 4E-148 1095.5 29.3 390 20-413 15-421 (424)
2 3rg0_A Calreticulin; beta-sand 100.0 6E-114 2E-118 855.2 23.6 309 29-421 4-320 (332)
3 3pow_A Calreticulin; legume le 100.0 5.6E-85 1.9E-89 634.1 21.6 247 28-421 8-261 (265)
4 1hhn_A Calreticulin; molecular 100.0 4E-37 1.4E-41 261.1 7.1 100 223-362 1-100 (101)
5 1jhn_A Calnexin; jelly-roll, b 100.0 5E-36 1.7E-40 305.7 16.3 144 200-357 233-378 (424)
6 1hhn_A Calreticulin; molecular 99.9 1.9E-25 6.4E-30 189.6 5.0 87 259-363 1-87 (101)
7 3rg0_A Calreticulin; beta-sand 99.6 1.3E-16 4.6E-21 158.8 0.4 69 247-363 179-247 (332)
8 3ici_C Calnexin, PP90; protein 99.3 2.4E-12 8.1E-17 91.3 3.4 35 275-309 4-38 (38)
9 3ici_C Calnexin, PP90; protein 98.1 2.3E-06 7.9E-11 60.7 3.5 35 237-285 4-38 (38)
10 3zyp_A CIP1; metal binding pro 22.7 4.1E+02 0.014 23.7 11.7 72 35-110 3-80 (218)
11 1qd1_A Formiminotransferase-cy 22.5 1.4E+02 0.0049 29.8 6.4 50 368-433 172-221 (325)
No 1
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=100.00 E-value=1.3e-143 Score=1095.51 Aligned_cols=390 Identities=49% Similarity=1.012 Sum_probs=358.4
Q ss_pred hhcccccCCCcceeeecccCcccCCCceeccCC---------CccceEEEeCCCC---CCCCceeecCcccceeeecccC
Q 013908 20 VSFQLISASDDATILYESFDESFEGRWIVSQKD---------EYKGVWKHSKSEG---HEDYGLLVGEPAKKYAIVKELD 87 (434)
Q Consensus 20 ~~~~~~~~~~~~~~F~E~F~~~~~~rWv~S~~~---------~y~G~W~~~~~~~---~~D~GLv~~~~ar~yaIS~kl~ 87 (434)
++|.+ +.+++++||+|+|+++|.+|||+|+++ +|.|+|+++++.. .+|+||||+++|||||||++|+
T Consensus 15 ~~y~~-p~~~~~~~F~E~F~~~~~~rWv~S~~~k~~~~~~~~~y~G~w~~~~~~~~~~~~DkGL~~~~~ar~yaISa~~~ 93 (424)
T 1jhn_A 15 VTYKA-PVPSGEVYFADSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRAKHHAISAKLN 93 (424)
T ss_dssp --CCC-CCCCSCCSSEECCCSSSCCSCCCCCCC-----------CCEEECCBCTTCSSTTCBCCEEECSSCCCEEEEEEE
T ss_pred ceeec-CCCCcceeEeeecCCCccCCceeCcccccccccccccCCeEEEEecCccCCCccccceeeccchhHHHHHHhhc
Confidence 34443 567899999999999999999999986 5789999999853 6899999999999999999999
Q ss_pred CCccCCCCcEEEEEEEEecCccccCCceeEecCcCCCCCcccccCCCCCeEEEEccCCCCCCCeEEEEEecCCCCCcccc
Q 013908 88 EPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYI 167 (434)
Q Consensus 88 ~P~~~~~k~LVvQYeVk~q~~~~CGGaYiKLl~~~~~~~~~~~f~~~tpY~imFGPD~Cg~~~kvh~i~~~~np~~g~~~ 167 (434)
+||+|++|+||||||||||++|+|||||||||+.. .++++++|+++|||+||||||+||.++||||||+|+||+||+++
T Consensus 94 kpf~~~~k~LVvQYeVk~q~~idCGGaYiKLl~~~-~~~d~~~f~~~TpY~IMFGPD~CG~~~kvH~I~~~knp~~g~~~ 172 (424)
T 1jhn_A 94 KPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKT-PELNLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYE 172 (424)
T ss_dssp EEECSSSSCEEEEEEECCTTCCSEEECCEEEEBCC-SSCCGGGCCSSCCEEEEEEEEEESSCCEEEEEEEEECTTTCCEE
T ss_pred CccccCCCCEEEEEEEEecccccccceEEEeecCc-ccCCHhHcCCCCCceEeccCCccCCCCeEEEEEecCCCCCCchh
Confidence 99999999999999999999999999999999743 35889999999999999999999999999999999999999999
Q ss_pred ccccCCCCC----CCCCCCCceEEEEEcCCCceEEEecCeeeccccccccCCCCCCCCCCCCcCCCCCCCCCCccccCcc
Q 013908 168 EHHLKNPPS----VPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIPDPDDKKPEDWDERAKI 243 (434)
Q Consensus 168 e~~~~~~~~----~~~d~~tHlYTLii~pdnt~ei~IDg~~~~~g~l~~~~d~~p~~~pp~~I~DP~d~KP~DWdd~~~I 243 (434)
|+|+++++. +..|++||||||||||||||||+|||+++.+|||+ +||+|+|+||++|+||+|+||+|||++++|
T Consensus 173 ekh~~~~~~~~~~~~~D~~tHlYTLIl~pdntyei~ID~~~v~~GsL~--~D~~Pp~~pp~~I~Dp~~~KP~DWde~~~I 250 (424)
T 1jhn_A 173 EKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLL--NDMTPPVNPSREIEDPEDQKPEDWDERPKI 250 (424)
T ss_dssp EECCCCCSSCCTHHHHSCSCEEEEEEEETTTEEEEEETTEEEEEEC---------CCSSCCCCBCTTCCCCTTCCCCSEE
T ss_pred hhcccCCcccccccccCCCceEEEEEEcCCCcEEEEECCceecccccH--HhccccCCCcccccCccccCcccccccccc
Confidence 999988763 24799999999999999999999999999999999 799999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCcCCCCCCCCCCCC
Q 013908 244 PDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPKCEAAPGCGEWKRPM 323 (434)
Q Consensus 244 ~Dp~~~KPeDWde~~p~~I~Dp~a~KP~dW~e~ep~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~~~~~~~cG~W~~P~ 323 (434)
+||+|+||+|||+++|.+|+||+|+||+||+++||++|+||+++||+||++++||+|++|+|+||+|+.++|||+|++||
T Consensus 251 ~Dp~a~KPeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~~G~W~~P~i~NP~~~~~~gcG~W~~P~ 330 (424)
T 1jhn_A 251 PDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPM 330 (424)
T ss_dssp ECSSCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTTSCCCCCCBCCCGGGTTSSCBSSCCCCE
T ss_pred CCcccCCccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCCCccccCcccCCchhcccccCCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCccCCCCCCCCCCCCCCCCCCCCCCCCC-CCCccceeEEEEeEeecCcEEeEeEeeCCHHHHHHHHHh
Q 013908 324 KRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKP-DFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRAS 402 (434)
Q Consensus 324 I~NP~ykG~W~pp~I~NP~YkG~W~P~~I~NP~y~~~~~p-~~~~i~~ig~ElW~~~~~~~fdNi~v~~d~~~A~~~~~~ 402 (434)
|.||+|||+|+||||+||+|+|+|+||+|+||+|+++.+| +|.+|++||||||||++|++|||||||+|+++|++++++
T Consensus 331 I~NP~ykG~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i~~iG~ElW~~~~g~~FDNilItdd~~~A~~~~~~ 410 (424)
T 1jhn_A 331 IDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNFIVCGDRRVVDDWAND 410 (424)
T ss_dssp EECTTCCCSCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCEEEEEECCCCSSSCCBCEEEEEESSSHHHHHHHHH
T ss_pred CCCccccCcccCCccCCCcccccccccccCCccccCCCcccccCcccEEEEEeEEeeCCcEEeeEEEcCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hcCCcchHHHH
Q 013908 403 AWKPKFDVEKE 413 (434)
Q Consensus 403 t~~~k~~~e~~ 413 (434)
||+.|+.+|.+
T Consensus 411 t~~~k~~~e~~ 421 (424)
T 1jhn_A 411 GWGLKKAADGA 421 (424)
T ss_dssp TTTC-------
T ss_pred hhhhhhhhhhh
Confidence 99999987754
No 2
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=100.00 E-value=5.6e-114 Score=855.17 Aligned_cols=309 Identities=37% Similarity=0.724 Sum_probs=265.1
Q ss_pred CcceeeecccCc--ccCCCceeccCCCccceEEEeCCCC----CCCCceeecCcccceeeecccCCCccCCCCcEEEEEE
Q 013908 29 DDATILYESFDE--SFEGRWIVSQKDEYKGVWKHSKSEG----HEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYE 102 (434)
Q Consensus 29 ~~~~~F~E~F~~--~~~~rWv~S~~~~y~G~W~~~~~~~----~~D~GLv~~~~ar~yaIS~kl~~P~~~~~k~LVvQYe 102 (434)
++++||+|+|++ +|++|||+|+++++.|+|+++++.. ++|+||||+++|||||||++| +||+|++|+||||||
T Consensus 4 ~~~vyF~E~F~d~~~w~~rWv~S~~~~~~G~w~~~~g~~~~~~~~DkGL~t~~~ak~yAISakf-~pf~n~~k~LVvQYe 82 (332)
T 3rg0_A 4 DPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKF-EPFSNKGQTLVVQFT 82 (332)
T ss_dssp CCCEEEEECCCSGGGGGGTEEECCSSSSCCCEEEECCSSCSSTTTTCEEEECSSSEEEEEEEEE-EEECCTTSCEEEEEE
T ss_pred ceEEEEEeecCCCCcccCCceeCCCcccCCeEEeecCcccCCcccccceeecchhhhhhhhccc-CCccCCCCCEEEEEE
Confidence 688999999985 7999999999999999999999853 679999999999999999999 899999999999999
Q ss_pred EEecCccccCCceeEecCcCCCCCcccccCCCCCeEEEEccCCCCC-CCeEEEEEecCCCCCccccccccCCCCCCCCCC
Q 013908 103 VRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGA-TNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDK 181 (434)
Q Consensus 103 Vk~q~~~~CGGaYiKLl~~~~~~~~~~~f~~~tpY~imFGPD~Cg~-~~kvh~i~~~~np~~g~~~e~~~~~~~~~~~d~ 181 (434)
||||++|+|||||||||+ +++++++|+++|||+||||||+||+ ++||||||+|+|+ +|+++++++|+.|+
T Consensus 83 VK~e~~idCGGaYiKLl~---~~~d~~~f~~~TpY~IMFGPD~CG~~~~kvH~I~~~k~~------~h~~kk~i~~~~D~ 153 (332)
T 3rg0_A 83 VKHEQNIDCGGGYVKLFP---SGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGK------NVLINKDIRSKDDE 153 (332)
T ss_dssp EEETTCCSEEECCEEEEC---SSCCGGGCCTTSCCSEEEEEEEETTTEEEEEEEEEETTE------EEECSSCCBCCCSS
T ss_pred EEcccccccCceEEEeec---CcCCHhhcCCCCcceEEecCcccCCCCCEEEEEEEeCCc------cccccCCCCCCCCC
Confidence 999999999999999997 4689999999999999999999998 8999999999985 47778899999999
Q ss_pred CCceEEEEEcCCCceEEEecCeeeccccccccCCCCCCCCCCCCcCCCCCCCCCCccccCccCCCCCCCCCCCCCCCCCc
Q 013908 182 LTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIPDPDDKKPEDWDERAKIPDPDAVKPEDWDEDAPME 261 (434)
Q Consensus 182 ~tHlYTLii~pdnt~ei~IDg~~~~~g~l~~~~d~~p~~~pp~~I~DP~d~KP~DWdd~~~I~Dp~~~KPeDWde~~p~~ 261 (434)
+||||||||||||||||+|||+++.+|||+ +||+ ++||++|+||+|+||+||||+++|+||+|+||+|||+
T Consensus 154 ~THLYTLIi~pdntyeI~ID~~~v~~GsL~--~Dwd--~~ppk~I~Dp~d~KPedWdd~~~I~DP~a~KPeDWd~----- 224 (332)
T 3rg0_A 154 FTHLYTLIVRPDNTYEVKIDNSQVESGSLE--DDWD--FLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK----- 224 (332)
T ss_dssp SEEEEEEEECTTSEEEEEETTEEEEEEEHH--HHSC--CSCCSEEECTTCCCCTTCCCCCCCC-----------------
T ss_pred CCceEEEEEcCCCeEEEEECCEEEeccccc--CCCC--cCCccccCCcccCCcccCcCcccCCCcccCCcccccc-----
Confidence 999999999999999999999999999999 5665 7899999999999999999999999999998888851
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCcCCccCCC
Q 013908 262 IEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNP 341 (434)
Q Consensus 262 I~Dp~a~KP~dW~e~ep~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~~~~~~~cG~W~~P~I~NP~ykG~W~pp~I~NP 341 (434)
|+|||+|+||||+||
T Consensus 225 -----------------------------------------------------------------p~YkG~Wkp~~I~NP 239 (332)
T 3rg0_A 225 -----------------------------------------------------------------GGSGGEWKPRQIDNP 239 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------ccccccccccccCCC
Confidence 229999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCccceeEEEEeEeecCcEEeEeEeeCCHHHHHHHHHhhcCCcchHHHHhHHHHHH
Q 013908 342 NYKGIWKPQQIPNPNYFELDKP-DFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVEKEKLKAEEA 420 (434)
Q Consensus 342 ~YkG~W~P~~I~NP~y~~~~~p-~~~~i~~ig~ElW~~~~~~~fdNi~v~~d~~~A~~~~~~t~~~k~~~e~~~~~~~~~ 420 (434)
+|+|+|+||+|+||+|+++.+| +|.+|++||||||||++|++|||||||+|+++|++++++||++++.+|++.+.++++
T Consensus 240 ~YkG~W~p~~I~NP~Y~~D~~~~~~~~i~~iG~ElWq~~sg~iFDNilItdd~~~A~~~~~~t~~~~~~~Ek~~~~~~~~ 319 (332)
T 3rg0_A 240 DYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDE 319 (332)
T ss_dssp -CCCCCCCCEEECTTCCCCTTTTCCSCEEEEEEEEEESSCCEEEEEEEEESCHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cccCCccCCccCCCCCcCCcchhccccccEEEEEEEeccCCcEEeeEEEcCCHHHHHHHHHHhhhhhhHHHHHHHHHHhH
Confidence 9999999999999999999998 899999999999999999999999999999999999999999999999977766554
Q ss_pred h
Q 013908 421 A 421 (434)
Q Consensus 421 ~ 421 (434)
+
T Consensus 320 ~ 320 (332)
T 3rg0_A 320 E 320 (332)
T ss_dssp H
T ss_pred H
Confidence 4
No 3
>3pow_A Calreticulin; legume lectin fold, CNX/CRT family, multi-functional, carboh binding, peptide binding, multi-compartmental, chaperone; 1.55A {Homo sapiens} PDB: 3pos_A 3o0w_A* 3o0v_A* 3o0x_A*
Probab=100.00 E-value=5.6e-85 Score=634.08 Aligned_cols=247 Identities=30% Similarity=0.593 Sum_probs=221.5
Q ss_pred CCcceeeecccCc--ccCCCceeccCCCccceEEEeCCCC----CCCCceeecCcccceeeecccCCCccCCCCcEEEEE
Q 013908 28 SDDATILYESFDE--SFEGRWIVSQKDEYKGVWKHSKSEG----HEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQY 101 (434)
Q Consensus 28 ~~~~~~F~E~F~~--~~~~rWv~S~~~~y~G~W~~~~~~~----~~D~GLv~~~~ar~yaIS~kl~~P~~~~~k~LVvQY 101 (434)
.++++||+|+|++ +|++|||+|+++++.|+|+++++.. ++|+||||+++|||||||++| +||+|++|+|||||
T Consensus 8 ~~~~v~F~E~Fdd~~~w~~rWv~S~~kk~~G~w~~~~g~~~~~~~~DkGL~t~~~Ak~yaISakl-~pf~~~~k~LVvQY 86 (265)
T 3pow_A 8 REPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQF 86 (265)
T ss_dssp CCCSEEEEECCCSGGGGGGTEEECCSSSCCCCEEEECCSSCSCTTTTCEEEECSSSEEEEEEEEE-EEECCTTSCEEEEE
T ss_pred eeeeEEEEeecCCCCcccCCeeeCCCcCcCCeEEeecccccCCcccccceeecchhhhhhhhccc-CCccCCCCCEEEEE
Confidence 4788999999985 8999999999999999999999853 689999999999999999999 99999999999999
Q ss_pred EEEecCccccCCceeEecCcCCCCCcccccCCCCCeEEEEccCCCCC-CCeEEEEEecCCCCCccccccccCCCCCCCCC
Q 013908 102 EVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGA-TNKVHFILKHKNPKSGEYIEHHLKNPPSVPSD 180 (434)
Q Consensus 102 eVk~q~~~~CGGaYiKLl~~~~~~~~~~~f~~~tpY~imFGPD~Cg~-~~kvh~i~~~~np~~g~~~e~~~~~~~~~~~d 180 (434)
|||||++|+|||||||||+ +++++++|+++|||+||||||+||+ ++||||||+|+|+ +|+++++++++.|
T Consensus 87 eVk~q~~idCGGaYiKLl~---~~~~~~~f~~~tpY~IMFGPD~CG~~~~kvHfI~~~k~~------~h~~~~~~~~~~D 157 (265)
T 3pow_A 87 TVKHEQNIDCGGGYVKLFP---NSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGK------NVLINKDIRCKDD 157 (265)
T ss_dssp EEECTTCCSEEECCEEEEC---TTCCGGGCCTTSCCSEEEEEEEESTTCEEEEEEEEETTE------EEECSSCCBCCCS
T ss_pred EEEeccccccCceEEEeec---CCCCHhhcCCCCCceEEecCcccCCCCCEEEEEEEcCCc------cccccCCCCCCCC
Confidence 9999999999999999997 4589999999999999999999998 9999999999985 5777889999999
Q ss_pred CCCceEEEEEcCCCceEEEecCeeeccccccccCCCCCCCCCCCCcCCCCCCCCCCccccCccCCCCCCCCCCCCCCCCC
Q 013908 181 KLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIPEKTIPDPDDKKPEDWDERAKIPDPDAVKPEDWDEDAPM 260 (434)
Q Consensus 181 ~~tHlYTLii~pdnt~ei~IDg~~~~~g~l~~~~d~~p~~~pp~~I~DP~d~KP~DWdd~~~I~Dp~~~KPeDWde~~p~ 260 (434)
++||||||||+|||||||+|||+++.+|||++++||. ||
T Consensus 158 ~~tHLYTLIi~pdntyeI~ID~~~v~~GsL~~d~df~----Pp------------------------------------- 196 (265)
T 3pow_A 158 EFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFL----PG------------------------------------- 196 (265)
T ss_dssp SSEEEEEEEECTTSEEEEEETTEEEEEEEHHHHSCC--------------------------------------------
T ss_pred CCCceEEEEEcCCCeEEEEECCEEeeeccccCccccC----CC-------------------------------------
Confidence 9999999999999999999999999999999655554 33
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCcCCccCC
Q 013908 261 EIEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDN 340 (434)
Q Consensus 261 ~I~Dp~a~KP~dW~e~ep~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~~~~~~~cG~W~~P~I~NP~ykG~W~pp~I~N 340 (434)
T Consensus 197 -------------------------------------------------------------------------------- 196 (265)
T 3pow_A 197 -------------------------------------------------------------------------------- 196 (265)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccceeEEEEeEeecCcEEeEeEeeCCHHHHHHHHHhhcCCcchHHHHhHHHHHH
Q 013908 341 PNYKGIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVEKEKLKAEEA 420 (434)
Q Consensus 341 P~YkG~W~P~~I~NP~y~~~~~p~~~~i~~ig~ElW~~~~~~~fdNi~v~~d~~~A~~~~~~t~~~k~~~e~~~~~~~~~ 420 (434)
.++|+++ .|.+|++||||||||++|+||||||||||+++|++++++||+.++.+|++...+.++
T Consensus 197 -----------~~d~~ly-----~~~~i~~vGldlWQvksGtiFDNiLITDd~~~A~~~~eetw~~~k~~Ek~~~~~~~~ 260 (265)
T 3pow_A 197 -----------SGDPSIY-----AYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDE 260 (265)
T ss_dssp ---------------CTT-----CCSCEEEEEEEEEESSCCCEEEEEEEESCHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred -----------CCCcccc-----ccccccEEEEEEEEecCCeEeccEEecCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 1233333 578899999999999999999999999999999999999999999999877665544
Q ss_pred h
Q 013908 421 A 421 (434)
Q Consensus 421 ~ 421 (434)
+
T Consensus 261 ~ 261 (265)
T 3pow_A 261 E 261 (265)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=100.00 E-value=4e-37 Score=261.09 Aligned_cols=100 Identities=60% Similarity=1.183 Sum_probs=83.9
Q ss_pred CCCcCCCCCCCCCCccccCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCC
Q 013908 223 EKTIPDPDDKKPEDWDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEWEA 302 (434)
Q Consensus 223 p~~I~DP~d~KP~DWdd~~~I~Dp~~~KPeDWde~~p~~I~Dp~a~KP~dW~e~ep~~I~DP~~~kP~dWd~~~~G~W~~ 302 (434)
+++|+||+++||+|||++++|+||+|+||+|||+ +++|+||+++||++|+++++
T Consensus 1 p~~I~Dp~~~KPeDWd~~~~I~DP~a~KPeDWde---------------------~~~I~dP~~~kP~dWd~~~~----- 54 (101)
T 1hhn_A 1 SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDK---------------------PEHIPDPDAKKPEDWDEEMD----- 54 (101)
T ss_dssp CCSBCCSTTCCCSCCSTTSEECCSSCCCCSTTCC---------------------CSEEECTTCCCCTTCCHHHH-----
T ss_pred CcccCCcccCCccccccccccCCcccCCccCccc---------------------cccCCCcccCCccccCcccC-----
Confidence 5789999999999999988888888888888864 45777777777777776654
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCcCCccCCCCCCCCCCCCCCCCCCCCCCCC
Q 013908 303 PKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDK 362 (434)
Q Consensus 303 p~I~NP~~~~~~~cG~W~~P~I~NP~ykG~W~pp~I~NP~YkG~W~P~~I~NP~y~~~~~ 362 (434)
|+|++|||.||+|+|+|+++||.||+|+|.|+|++|+||+|+++.+
T Consensus 55 --------------G~W~~p~I~NP~ykG~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~ 100 (101)
T 1hhn_A 55 --------------GEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDAN 100 (101)
T ss_dssp --------------SSCCCCEEECTTCCSSCCCCCEECSSCCCCCCCCCBCCTTCCSSSC
T ss_pred --------------CcccCCcCCCccCcCcccCCccCCCCCCCCccCCccCCCCccCCCC
Confidence 6666678888999999999999999999999999999999998753
No 5
>1jhn_A Calnexin; jelly-roll, beta sandwich, chaperone; 2.90A {Canis lupus familiaris} SCOP: b.29.1.12 b.104.1.1
Probab=100.00 E-value=5e-36 Score=305.74 Aligned_cols=144 Identities=40% Similarity=0.784 Sum_probs=130.2
Q ss_pred ecCeeeccccccccCCCCCCCCCCCCcCCCCCCCCCCcccc--CccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCC
Q 013908 200 IDGEEKQKANFLAADDFQPPLIPEKTIPDPDDKKPEDWDER--AKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLDDD 277 (434)
Q Consensus 200 IDg~~~~~g~l~~~~d~~p~~~pp~~I~DP~d~KP~DWdd~--~~I~Dp~~~KPeDWde~~p~~I~Dp~a~KP~dW~e~e 277 (434)
|+....++. +||+ .+++|+||+++||+||+++ ++|+||+|+||+||++++|.+|+||+|+||++|++++
T Consensus 233 I~Dp~~~KP-----~DWd----e~~~I~Dp~a~KPeDWde~~p~~I~Dp~A~KPedWdd~ep~~I~DP~a~KPedWd~~~ 303 (424)
T 1jhn_A 233 IEDPEDQKP-----EDWD----ERPKIPDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDM 303 (424)
T ss_dssp CBCTTCCCC-----TTCC----CCSEEECSSCCCCTTCCSSCCSEEECTTCCCCSSCBSSSCSCCBCTTCCCCTTCCTTT
T ss_pred ccCccccCc-----cccc----cccccCCcccCCccccccCCccccCCccccCCCCccccccccCCCcccCCccccccCC
Confidence 455555554 6765 5789999999999999986 4899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCcCCccCCCCCCCCCCCCCCCCCCC
Q 013908 278 PEEIDDPEATKPEDWDDEEDGEWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHIDNPNYKGIWKPQQIPNPNY 357 (434)
Q Consensus 278 p~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~~~~~~~cG~W~~P~I~NP~ykG~W~pp~I~NP~YkG~W~P~~I~NP~y 357 (434)
...+..|...+|.+|+..+||+|++|+|.||+| .|+|++|+|.||+|+|+|+|++|+||+|++.+.|..+.+=.+
T Consensus 304 ~G~W~~P~i~NP~~~~~~gcG~W~~P~I~NP~y-----kG~W~pp~I~NP~Ykg~W~p~~I~NP~y~~d~~p~~~~~i~~ 378 (424)
T 1jhn_A 304 DGEWEAPQIANPKCESAPGCGVWQRPMIDNPNY-----KGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSA 378 (424)
T ss_dssp SCCCCCCBCCCGGGTTSSCBSSCCCCEEECTTC-----CCSCCCCEEECTTCCCSCCCCBCCCTTCCCCCCTTCCCCEEE
T ss_pred CccccCcccCCchhcccccCCcccCCCCCCccc-----cCcccCCccCCCcccccccccccCCccccCCCcccccCcccE
Confidence 999999999999999999999999999999999 499999999999999999999999999999999987654333
No 6
>1hhn_A Calreticulin; molecular chaperone; NMR {Rattus norvegicus} SCOP: b.104.1.1 PDB: 1k9c_A 1k91_A
Probab=99.91 E-value=1.9e-25 Score=189.59 Aligned_cols=87 Identities=45% Similarity=0.890 Sum_probs=76.9
Q ss_pred CCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCcCCcc
Q 013908 259 PMEIEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKWHAPHI 338 (434)
Q Consensus 259 p~~I~Dp~a~KP~dW~e~ep~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~~~~~~~cG~W~~P~I~NP~ykG~W~pp~I 338 (434)
|++|+||+|+||+||++ +++|+||+++||+||++ +.+|+||+| ++|..++..++|+|+++||
T Consensus 1 p~~I~Dp~~~KPeDWd~--~~~I~DP~a~KPeDWde-------~~~I~dP~~---------~kP~dWd~~~~G~W~~p~I 62 (101)
T 1hhn_A 1 SKKIKDPDAAKPEDWDE--RAKIDDPTDSKPEDWDK-------PEHIPDPDA---------KKPEDWDEEMDGEWEPPVI 62 (101)
T ss_dssp CCSBCCSTTCCCSCCST--TSEECCSSCCCCSTTCC-------CSEEECTTC---------CCCTTCCHHHHSSCCCCEE
T ss_pred CcccCCcccCCcccccc--ccccCCcccCCccCccc-------cccCCCccc---------CCccccCcccCCcccCCcC
Confidence 45777888888888844 68999999999999997 459999999 4577888999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC
Q 013908 339 DNPNYKGIWKPQQIPNPNYFELDKP 363 (434)
Q Consensus 339 ~NP~YkG~W~P~~I~NP~y~~~~~p 363 (434)
.||+|+|+|+|++|+||+|++.+.|
T Consensus 63 ~NP~ykG~W~pp~I~NP~Ykg~W~p 87 (101)
T 1hhn_A 63 QNPEYKGEWKPRQIDNPDYKGTWIH 87 (101)
T ss_dssp ECTTCCSSCCCCCEECSSCCCCCCC
T ss_pred CCccCcCcccCCccCCCCCCCCccC
Confidence 9999999999999999999998866
No 7
>3rg0_A Calreticulin; beta-sandwich, chaperone, monoglucosylated proteins binding, carbohydrate binding, calcium binding, endoplasmic reticulu; 2.57A {Mus musculus}
Probab=99.58 E-value=1.3e-16 Score=158.81 Aligned_cols=69 Identities=42% Similarity=0.773 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCC
Q 013908 247 DAVKPEDWDEDAPMEIEDEDAVKPEGWLDDDPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPKCEAAPGCGEWKRPMKRN 326 (434)
Q Consensus 247 ~~~KPeDWde~~p~~I~Dp~a~KP~dW~e~ep~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~~~~~~~cG~W~~P~I~N 326 (434)
+++.++||++.+|++|+||+++||+||++ +++|+||+++||+
T Consensus 179 ~GsL~~Dwd~~ppk~I~Dp~d~KPedWdd--~~~I~DP~a~KPe------------------------------------ 220 (332)
T 3rg0_A 179 SGSLEDDWDFLPPKKIKDPDAAKPEDWDE--RAKIDDPTDSKPE------------------------------------ 220 (332)
T ss_dssp EEEHHHHSCCSCCSEEECTTCCCCTTCCC--CCCCC--------------------------------------------
T ss_pred cccccCCCCcCCccccCCcccCCcccCcC--cccCCCcccCCcc------------------------------------
Confidence 35679999999999999999999999954 7899999999985
Q ss_pred CCCCCCCcCCccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 013908 327 PAYKGKWHAPHIDNPNYKGIWKPQQIPNPNYFELDKP 363 (434)
Q Consensus 327 P~ykG~W~pp~I~NP~YkG~W~P~~I~NP~y~~~~~p 363 (434)
.|- ||+|+|.|+|++|+||+|.+.|.|
T Consensus 221 -----DWd-----~p~YkG~Wkp~~I~NP~YkG~W~p 247 (332)
T 3rg0_A 221 -----DWD-----KGGSGGEWKPRQIDNPDYKGTWIH 247 (332)
T ss_dssp ------------------------------CCCCCCC
T ss_pred -----ccc-----cccccccccccccCCCcccCCccC
Confidence 364 789999999999999999998755
No 8
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=99.26 E-value=2.4e-12 Score=91.31 Aligned_cols=35 Identities=57% Similarity=1.208 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCC
Q 013908 275 DDDPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPK 309 (434)
Q Consensus 275 e~ep~~I~DP~~~kP~dWd~~~~G~W~~p~I~NP~ 309 (434)
+++|++|+||+++||+|||+++||+|++|+|+||+
T Consensus 4 ~dep~~IpDP~a~KP~DWdde~DGeWe~P~I~NPk 38 (38)
T 3ici_C 4 MDEPKFIPDPNAEKPDDWNEDMDGEWEAPRISNPA 38 (38)
T ss_pred ccccccccCCCCCCCCCcCcCcCCcccCCcCCCcC
Confidence 35799999999999999999999999999998885
No 9
>3ici_C Calnexin, PP90; protein-protein complex, endoplasmic reticulum, glycoprotein isomerase, rotamase, chaperone, lectin, membrane; HET: MES; 1.70A {Canis lupus familiaris}
Probab=98.07 E-value=2.3e-06 Score=60.72 Aligned_cols=35 Identities=46% Similarity=0.932 Sum_probs=22.7
Q ss_pred ccccCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCC
Q 013908 237 WDERAKIPDPDAVKPEDWDEDAPMEIEDEDAVKPEGWLDDDPEEIDDPE 285 (434)
Q Consensus 237 Wdd~~~I~Dp~~~KPeDWde~~p~~I~Dp~a~KP~dW~e~ep~~I~DP~ 285 (434)
+++.++|+||+|+||+|||+..-. +| ++.+|++|.
T Consensus 4 ~dep~~IpDP~a~KP~DWdde~DG-----------eW---e~P~I~NPk 38 (38)
T 3ici_C 4 MDEPKFIPDPNAEKPDDWNEDMDG-----------EW---EAPRISNPA 38 (38)
T ss_pred ccccccccCCCCCCCCCcCcCcCC-----------cc---cCCcCCCcC
Confidence 445566777777777777655422 36 788888874
No 10
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=22.73 E-value=4.1e+02 Score=23.72 Aligned_cols=72 Identities=15% Similarity=0.223 Sum_probs=46.6
Q ss_pred ecccCccc-CCCceeccC-CCccceEEEeCCCC-CCCCceeecCcccc---eeeecccCCCccCCCCcEEEEEEEEecCc
Q 013908 35 YESFDESF-EGRWIVSQK-DEYKGVWKHSKSEG-HEDYGLLVGEPAKK---YAIVKELDEPLSLKDGTVVLQYEVRLQNG 108 (434)
Q Consensus 35 ~E~F~~~~-~~rWv~S~~-~~y~G~W~~~~~~~-~~D~GLv~~~~ar~---yaIS~kl~~P~~~~~k~LVvQYeVk~q~~ 108 (434)
.|.|+.++ ..+|..... ..-.|+-.+..... .+.+.|.++..+.- |++...+.. ....+-+.|=||+...
T Consensus 3 sddFEsg~~~~~W~~~~~~~~g~g~v~vdt~~a~sG~~slrvt~~~~~~~~~~~~~~~~~----~~~~~y~r~~v~~~~~ 78 (218)
T 3zyp_A 3 SDDFESGWDQTKWPISAPDCNQGGTVSLDTTVAHSGSNSMKVVGGPNGYCGHIFFGTTQV----PTGDVYVRAWIRLQTA 78 (218)
T ss_dssp EECSTTCCCTTTSCEECSSCCCSCEEEEESSSCSSSSCEEEEECCSSGGGGCEEEEECCC----CSSSEEEEEEEEESSC
T ss_pred ccccccCCCCCCceecCCCCCCccEEEEccccccCCceEEEEEccCCCccceEEeecccC----CCceEEEEEEEEeccc
Confidence 57888764 578987443 24457888876543 67789988765433 344444432 3456889999999877
Q ss_pred cc
Q 013908 109 LE 110 (434)
Q Consensus 109 ~~ 110 (434)
+.
T Consensus 79 ~~ 80 (218)
T 3zyp_A 79 LG 80 (218)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 11
>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1
Probab=22.53 E-value=1.4e+02 Score=29.77 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=34.9
Q ss_pred cceeEEEEeEeecCcEEeEeEeeCCHHHHHHHHHhhcCCcchHHHHhHHHHHHhccCCCCCcceec
Q 013908 368 IAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVEKEKLKAEEAAAGSDGLAGFQVM 433 (434)
Q Consensus 368 i~~ig~ElW~~~~~~~fdNi~v~~d~~~A~~~~~~t~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~ 433 (434)
.+.|| -..-++=-||-++.+.+.|++++...-...+... ..+||.+.|-|
T Consensus 172 at~vG-----Ar~~liayNVnLt~~~~~A~~IA~~vR~~gr~~~-----------~pGGL~~VqAm 221 (325)
T 1qd1_A 172 ATVAG-----ARKFLLAFNINLLSTREQAHRIALDLREQGRGKD-----------QPGRLKKVQAI 221 (325)
T ss_dssp CEEEE-----ECSCCEEEEEEESSCHHHHHHHHHHHSTTC-----------------CCSTTEEEE
T ss_pred eEEEe-----cCCceeeEeeeccCcHHHHHHHHHHhhhcCCCCC-----------CCCCccceEEe
Confidence 56676 4555777899999999999999988755543211 16899998876
Done!