Query 013910
Match_columns 434
No_of_seqs 136 out of 1845
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 08:37:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013910.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013910hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 9.3E-52 2E-56 373.1 28.0 406 1-417 110-527 (528)
2 KOG0569 Permease of the major 100.0 5.3E-43 1.2E-47 339.0 32.2 370 19-427 78-472 (485)
3 TIGR01299 synapt_SV2 synaptic 100.0 9.7E-42 2.1E-46 350.3 35.5 395 21-417 222-741 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.7E-39 3.7E-44 327.7 33.3 376 21-422 76-501 (502)
5 TIGR00898 2A0119 cation transp 100.0 4.7E-37 1E-41 310.7 36.0 353 23-420 149-505 (505)
6 KOG0254 Predicted transporter 100.0 1.3E-35 2.9E-40 299.6 31.8 369 21-425 109-499 (513)
7 KOG0255 Synaptic vesicle trans 100.0 1.1E-34 2.5E-39 294.1 33.7 364 24-426 141-509 (521)
8 PF00083 Sugar_tr: Sugar (and 100.0 2.9E-42 6.3E-47 343.8 -22.3 368 19-423 64-450 (451)
9 PRK10642 proline/glycine betai 100.0 3E-32 6.6E-37 274.0 35.0 340 23-419 79-439 (490)
10 PRK10077 xylE D-xylose transpo 100.0 2.1E-32 4.6E-37 274.9 33.3 363 22-424 76-472 (479)
11 KOG0252 Inorganic phosphate tr 100.0 2.3E-34 4.9E-39 268.5 13.8 372 22-423 105-511 (538)
12 PRK09952 shikimate transporter 100.0 1.7E-29 3.6E-34 250.5 35.0 329 21-413 84-436 (438)
13 TIGR00879 SP MFS transporter, 100.0 6.3E-30 1.4E-34 256.0 29.9 370 23-419 93-480 (481)
14 PRK10406 alpha-ketoglutarate t 100.0 1E-28 2.2E-33 244.7 34.9 324 22-417 84-430 (432)
15 TIGR00903 2A0129 major facilit 100.0 2.7E-27 5.9E-32 228.6 32.0 313 22-408 47-364 (368)
16 PRK15075 citrate-proton sympor 100.0 5.2E-26 1.1E-30 225.5 34.9 332 20-419 75-429 (434)
17 PRK12307 putative sialic acid 100.0 4.6E-26 1E-30 225.4 32.2 336 22-413 74-413 (426)
18 PRK11551 putative 3-hydroxyphe 100.0 1.8E-25 3.8E-30 219.8 33.7 323 22-409 71-396 (406)
19 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.8E-25 3.9E-30 220.0 30.7 325 23-387 65-398 (412)
20 TIGR00891 2A0112 putative sial 99.9 3.4E-25 7.5E-30 217.2 30.8 322 22-387 68-393 (405)
21 PRK11663 regulatory protein Uh 99.9 1.2E-24 2.5E-29 215.8 31.6 344 22-416 79-431 (434)
22 TIGR00895 2A0115 benzoate tran 99.9 2.4E-24 5.3E-29 210.5 31.9 324 21-381 72-397 (398)
23 TIGR00893 2A0114 d-galactonate 99.9 1.1E-24 2.4E-29 212.3 28.8 338 21-407 49-397 (399)
24 COG2271 UhpC Sugar phosphate p 99.9 1.2E-25 2.6E-30 209.4 20.5 340 19-409 82-434 (448)
25 PRK09556 uhpT sugar phosphate 99.9 1E-24 2.2E-29 218.2 26.3 342 22-413 85-454 (467)
26 PRK10489 enterobactin exporter 99.9 9.2E-24 2E-28 208.4 28.7 339 21-426 72-416 (417)
27 PRK03545 putative arabinose tr 99.9 7E-23 1.5E-27 200.3 33.3 312 22-409 65-380 (390)
28 TIGR00883 2A0106 metabolite-pr 99.9 3.2E-23 7E-28 202.2 30.8 302 20-386 54-377 (394)
29 PRK03893 putative sialic acid 99.9 3.1E-23 6.6E-28 209.4 30.9 365 20-410 74-455 (496)
30 PRK09705 cynX putative cyanate 99.9 7.1E-23 1.5E-27 200.4 32.4 322 20-418 63-390 (393)
31 PRK05122 major facilitator sup 99.9 2.8E-22 6E-27 196.7 32.7 320 20-419 70-398 (399)
32 PRK11273 glpT sn-glycerol-3-ph 99.9 2.3E-22 5E-27 200.4 32.0 344 22-414 84-441 (452)
33 TIGR00890 2A0111 Oxalate/Forma 99.9 8.8E-23 1.9E-27 197.9 28.2 311 22-401 59-374 (377)
34 PLN00028 nitrate transmembrane 99.9 2.3E-22 5.1E-27 201.4 30.8 327 19-409 89-433 (476)
35 TIGR00894 2A0114euk Na(+)-depe 99.9 1.6E-22 3.4E-27 202.5 28.7 333 23-408 98-449 (465)
36 COG2814 AraJ Arabinose efflux 99.9 1.3E-21 2.8E-26 184.8 31.1 313 23-409 70-386 (394)
37 PRK03699 putative transporter; 99.9 2.1E-21 4.5E-26 190.2 31.4 318 20-409 61-380 (394)
38 TIGR00712 glpT glycerol-3-phos 99.9 1.3E-21 2.8E-26 194.3 29.8 341 23-413 83-437 (438)
39 TIGR00899 2A0120 sugar efflux 99.9 6.1E-21 1.3E-25 185.4 33.3 313 23-408 55-373 (375)
40 cd06174 MFS The Major Facilita 99.9 6.9E-21 1.5E-25 182.6 31.3 293 23-407 56-350 (352)
41 TIGR00881 2A0104 phosphoglycer 99.9 8.2E-22 1.8E-26 191.2 25.1 316 21-386 50-374 (379)
42 TIGR00900 2A0121 H+ Antiporter 99.9 2.4E-21 5.2E-26 187.1 28.2 300 22-385 55-364 (365)
43 PRK12382 putative transporter; 99.9 9.1E-21 2E-25 185.5 31.0 308 22-408 72-388 (392)
44 PRK11010 ampG muropeptide tran 99.9 4.1E-20 8.8E-25 185.6 35.4 326 16-409 61-403 (491)
45 TIGR00711 efflux_EmrB drug res 99.9 2.7E-21 5.9E-26 194.5 25.5 334 21-384 57-410 (485)
46 PRK10473 multidrug efflux syst 99.9 9.7E-20 2.1E-24 178.3 34.0 123 21-143 58-182 (392)
47 PRK09874 drug efflux system pr 99.9 4.5E-20 9.9E-25 181.4 31.6 319 22-409 75-398 (408)
48 PRK10091 MFS transport protein 99.9 6.3E-20 1.4E-24 178.9 31.4 312 22-409 59-376 (382)
49 PRK10213 nepI ribonucleoside t 99.9 1.5E-19 3.3E-24 176.8 33.5 122 22-143 76-199 (394)
50 PRK15011 sugar efflux transpor 99.9 1.5E-19 3.2E-24 177.0 33.3 315 24-412 74-393 (393)
51 PRK10504 putative transporter; 99.9 1.9E-19 4.2E-24 180.5 34.5 340 20-386 64-417 (471)
52 PF07690 MFS_1: Major Facilita 99.9 1.3E-20 2.9E-25 181.0 23.1 293 22-375 53-352 (352)
53 PRK15402 multidrug efflux syst 99.9 7.9E-19 1.7E-23 172.7 35.7 123 22-144 69-193 (406)
54 TIGR00897 2A0118 polyol permea 99.9 5.2E-19 1.1E-23 173.7 34.0 318 22-408 69-400 (402)
55 TIGR00710 efflux_Bcr_CflA drug 99.9 8E-19 1.7E-23 171.0 35.0 122 22-143 61-184 (385)
56 PRK14995 methyl viologen resis 99.9 2.1E-19 4.6E-24 181.1 30.0 332 22-383 62-412 (495)
57 PRK15034 nitrate/nitrite trans 99.9 3.6E-19 7.8E-24 174.0 30.0 309 22-408 91-453 (462)
58 PRK11102 bicyclomycin/multidru 99.9 1.3E-18 2.8E-23 169.3 32.1 122 22-143 47-170 (377)
59 TIGR00892 2A0113 monocarboxyla 99.9 1.2E-19 2.6E-24 180.8 24.9 335 20-403 73-415 (455)
60 PRK11043 putative transporter; 99.9 4.8E-18 1E-22 166.8 35.4 123 21-143 61-184 (401)
61 PRK11195 lysophospholipid tran 99.9 1.6E-18 3.5E-23 169.5 30.9 318 23-409 60-380 (393)
62 COG2223 NarK Nitrate/nitrite t 99.8 8.7E-19 1.9E-23 164.0 25.6 315 23-408 71-400 (417)
63 PRK03633 putative MFS family t 99.8 5.3E-18 1.2E-22 165.3 32.3 307 21-406 61-369 (381)
64 TIGR00886 2A0108 nitrite extru 99.8 5.9E-19 1.3E-23 170.9 25.2 124 21-144 57-193 (366)
65 PRK08633 2-acyl-glycerophospho 99.8 2.5E-18 5.4E-23 190.7 33.2 327 22-411 68-412 (1146)
66 KOG2532 Permease of the major 99.8 4.9E-19 1.1E-23 174.1 23.4 331 23-408 95-446 (466)
67 PRK11646 multidrug resistance 99.8 1.2E-17 2.7E-22 163.7 31.8 119 22-141 67-187 (400)
68 TIGR00885 fucP L-fucose:H+ sym 99.8 1.6E-17 3.4E-22 163.2 32.1 292 21-384 58-381 (410)
69 PRK15403 multidrug efflux syst 99.8 2.4E-17 5.2E-22 162.3 33.0 123 22-144 72-196 (413)
70 PRK10133 L-fucose transporter; 99.8 2.5E-17 5.5E-22 163.1 32.5 305 21-396 81-420 (438)
71 KOG2533 Permease of the major 99.8 7.9E-19 1.7E-23 173.1 21.0 122 23-144 103-232 (495)
72 PRK11902 ampG muropeptide tran 99.8 8E-17 1.7E-21 158.2 34.2 318 23-411 54-392 (402)
73 PRK10054 putative transporter; 99.8 1.4E-17 3E-22 163.1 28.2 313 22-405 64-380 (395)
74 TIGR00901 2A0125 AmpG-related 99.8 1.4E-17 3E-22 160.8 27.5 283 22-368 42-355 (356)
75 PRK11652 emrD multidrug resist 99.8 2.6E-16 5.5E-21 154.2 33.7 123 22-144 64-188 (394)
76 PRK06814 acylglycerophosphoeth 99.8 2.5E-17 5.5E-22 182.3 28.5 298 23-384 74-396 (1140)
77 TIGR00896 CynX cyanate transpo 99.8 9.4E-17 2E-21 155.0 29.0 291 21-387 55-351 (355)
78 TIGR00889 2A0110 nucleoside tr 99.8 2.5E-16 5.4E-21 155.2 31.3 331 23-418 60-411 (418)
79 KOG1330 Sugar transporter/spin 99.8 6.7E-19 1.5E-23 166.0 10.2 122 23-144 90-214 (493)
80 PRK09528 lacY galactoside perm 99.8 2.7E-16 5.9E-21 155.4 28.0 134 278-411 271-405 (420)
81 TIGR00882 2A0105 oligosacchari 99.8 8.9E-16 1.9E-20 150.5 30.5 321 23-407 60-393 (396)
82 TIGR00792 gph sugar (Glycoside 99.8 7.9E-16 1.7E-20 152.8 27.9 297 23-386 57-382 (437)
83 TIGR00902 2A0127 phenyl propri 99.7 6.7E-15 1.4E-19 143.6 33.2 310 23-405 61-375 (382)
84 PRK11128 putative 3-phenylprop 99.7 3.1E-14 6.6E-19 138.9 32.9 308 23-405 61-375 (382)
85 PTZ00207 hypothetical protein; 99.7 5E-15 1.1E-19 149.0 27.3 139 21-161 81-229 (591)
86 TIGR02718 sider_RhtX_FptX side 99.7 6.1E-14 1.3E-18 137.2 31.5 318 17-404 51-386 (390)
87 TIGR00924 yjdL_sub1_fam amino 99.7 4.1E-14 8.8E-19 141.6 30.6 111 22-132 69-184 (475)
88 PF05977 MFS_3: Transmembrane 99.7 6.5E-14 1.4E-18 140.3 30.8 327 16-408 57-393 (524)
89 KOG2504 Monocarboxylate transp 99.7 4.3E-15 9.3E-20 148.1 21.8 363 23-409 103-476 (509)
90 PF06609 TRI12: Fungal trichot 99.7 5.2E-14 1.1E-18 140.9 29.0 335 22-379 99-462 (599)
91 PRK10207 dipeptide/tripeptide 99.7 1.1E-13 2.3E-18 138.9 29.3 107 21-127 70-181 (489)
92 PRK09584 tppB putative tripept 99.7 1.4E-13 3.1E-18 138.5 29.8 112 20-131 76-192 (500)
93 KOG2615 Permease of the major 99.7 1.7E-14 3.6E-19 133.0 20.6 119 23-142 90-216 (451)
94 TIGR00806 rfc RFC reduced fola 99.6 5.1E-14 1.1E-18 135.8 22.0 121 21-142 82-205 (511)
95 PF11700 ATG22: Vacuole efflux 99.6 2.3E-12 5E-17 127.9 34.1 330 24-416 93-474 (477)
96 KOG3764 Vesicular amine transp 99.6 3.4E-14 7.3E-19 131.7 15.5 117 23-139 128-246 (464)
97 TIGR00805 oat sodium-independe 99.6 9.4E-14 2E-18 143.1 18.0 121 22-142 89-283 (633)
98 COG0738 FucP Fucose permease [ 99.6 1.4E-11 3E-16 115.3 29.5 300 21-392 68-392 (422)
99 TIGR01301 GPH_sucrose GPH fami 99.6 2.7E-12 6E-17 126.7 26.4 349 19-414 54-476 (477)
100 TIGR01272 gluP glucose/galacto 99.5 1.5E-11 3.2E-16 116.2 28.6 275 50-393 6-299 (310)
101 TIGR00788 fbt folate/biopterin 99.5 1.5E-12 3.2E-17 130.2 20.6 312 23-386 82-415 (468)
102 PRK09669 putative symporter Ya 99.5 2E-11 4.3E-16 121.6 26.9 293 23-386 67-390 (444)
103 PRK10642 proline/glycine betai 99.5 2.8E-13 6E-18 136.5 13.0 142 21-163 306-458 (490)
104 PRK11462 putative transporter; 99.4 1.7E-10 3.6E-15 115.2 28.8 108 27-134 75-198 (460)
105 COG2807 CynX Cyanate permease 99.4 4E-10 8.8E-15 104.1 28.4 312 19-407 65-383 (395)
106 PF13347 MFS_2: MFS/sugar tran 99.4 4.5E-11 9.8E-16 118.4 23.5 293 23-384 59-384 (428)
107 PRK10429 melibiose:sodium symp 99.4 1.1E-10 2.4E-15 117.2 25.3 109 277-385 274-394 (473)
108 COG2270 Permeases of the major 99.3 1.1E-09 2.3E-14 103.5 25.5 327 23-415 80-434 (438)
109 PF03825 Nuc_H_symport: Nucleo 99.3 1.6E-08 3.4E-13 98.7 34.1 112 276-387 250-367 (400)
110 PF01306 LacY_symp: LacY proto 99.3 3.2E-09 7E-14 102.1 27.7 140 277-416 267-407 (412)
111 TIGR00880 2_A_01_02 Multidrug 99.3 3.5E-11 7.5E-16 99.0 11.8 122 21-142 18-141 (141)
112 PRK15462 dipeptide/tripeptide 99.3 1.5E-08 3.2E-13 100.8 31.9 111 20-130 64-179 (493)
113 COG2211 MelB Na+/melibiose sym 99.2 5.7E-09 1.2E-13 101.4 25.7 292 27-384 78-396 (467)
114 PRK09848 glucuronide transport 99.2 1.1E-08 2.4E-13 102.0 25.8 106 280-385 275-389 (448)
115 PLN00028 nitrate transmembrane 99.2 5.2E-09 1.1E-13 105.1 23.3 181 220-412 33-222 (476)
116 TIGR00880 2_A_01_02 Multidrug 99.2 1.1E-09 2.3E-14 90.0 14.3 133 280-412 9-141 (141)
117 TIGR00710 efflux_Bcr_CflA drug 99.1 4.5E-09 9.8E-14 102.3 18.6 141 275-415 46-186 (385)
118 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.2E-08 2.7E-13 100.5 20.2 137 277-413 51-193 (412)
119 PRK11551 putative 3-hydroxyphe 99.1 9.7E-09 2.1E-13 100.9 19.2 139 275-413 56-194 (406)
120 TIGR00895 2A0115 benzoate tran 99.1 4.5E-09 9.7E-14 102.6 16.5 138 276-413 59-196 (398)
121 PRK15462 dipeptide/tripeptide 99.1 1.1E-08 2.4E-13 101.7 19.2 128 277-405 53-185 (493)
122 KOG4686 Predicted sugar transp 99.1 1.2E-08 2.7E-13 90.9 17.2 123 283-408 314-442 (459)
123 PRK10054 putative transporter; 99.1 1.2E-08 2.7E-13 99.9 19.1 136 277-413 51-186 (395)
124 PRK10473 multidrug efflux syst 99.1 9.2E-09 2E-13 100.7 18.2 140 276-415 45-184 (392)
125 PF07690 MFS_1: Major Facilita 99.1 2.1E-08 4.5E-13 96.2 20.2 140 275-414 38-177 (352)
126 PRK10213 nepI ribonucleoside t 99.0 2.6E-08 5.6E-13 97.6 20.9 137 277-413 63-199 (394)
127 TIGR01299 synapt_SV2 synaptic 99.0 2.3E-08 5.1E-13 104.1 21.0 107 276-382 209-315 (742)
128 TIGR00893 2A0114 d-galactonate 99.0 7.1E-09 1.5E-13 100.8 15.9 139 276-414 36-174 (399)
129 PRK15402 multidrug efflux syst 99.0 2.4E-08 5.3E-13 98.2 19.3 138 277-414 56-193 (406)
130 PRK10504 putative transporter; 99.0 3.2E-08 6.9E-13 99.4 20.4 135 279-413 55-189 (471)
131 PRK11663 regulatory protein Uh 99.0 2.7E-08 5.9E-13 98.8 19.5 137 276-412 65-201 (434)
132 PRK03699 putative transporter; 99.0 6.4E-08 1.4E-12 94.8 21.9 130 277-406 50-180 (394)
133 TIGR00891 2A0112 putative sial 99.0 3.4E-08 7.3E-13 96.7 19.8 137 276-413 54-192 (405)
134 PRK15403 multidrug efflux syst 99.0 3.1E-08 6.6E-13 97.7 19.1 136 279-414 61-196 (413)
135 PRK12307 putative sialic acid 99.0 3.8E-08 8.2E-13 97.4 19.8 118 276-393 60-177 (426)
136 TIGR00900 2A0121 H+ Antiporter 99.0 5.5E-08 1.2E-12 93.6 20.2 133 276-408 41-178 (365)
137 PRK03893 putative sialic acid 99.0 5.1E-08 1.1E-12 98.5 20.6 117 277-393 63-179 (496)
138 KOG2563 Permease of the major 99.0 5.9E-08 1.3E-12 92.4 18.8 333 23-419 101-460 (480)
139 TIGR00711 efflux_EmrB drug res 99.0 2.9E-08 6.3E-13 99.9 17.7 139 276-414 44-182 (485)
140 PRK03545 putative arabinose tr 99.0 8E-08 1.7E-12 94.0 20.2 136 278-413 53-188 (390)
141 PRK11102 bicyclomycin/multidru 98.9 2.8E-08 6.1E-13 96.6 16.5 138 277-414 34-171 (377)
142 TIGR00889 2A0110 nucleoside tr 98.9 5.8E-09 1.3E-13 102.9 11.2 125 18-142 268-405 (418)
143 TIGR00881 2A0104 phosphoglycer 98.9 1.2E-08 2.6E-13 98.8 12.8 138 276-413 37-175 (379)
144 TIGR00924 yjdL_sub1_fam amino 98.9 8.5E-08 1.8E-12 96.2 18.5 172 228-407 15-190 (475)
145 PRK11652 emrD multidrug resist 98.9 1.9E-07 4.2E-12 91.4 19.9 139 276-414 50-188 (394)
146 KOG2816 Predicted transporter 98.9 1.4E-06 3E-11 86.1 25.3 308 16-382 74-390 (463)
147 PRK14995 methyl viologen resis 98.9 2.7E-07 5.8E-12 93.3 21.0 136 279-414 51-187 (495)
148 TIGR00903 2A0129 major facilit 98.9 1.2E-07 2.7E-12 91.8 17.6 136 277-413 34-169 (368)
149 PRK10091 MFS transport protein 98.9 1.7E-07 3.7E-12 91.4 18.5 138 276-413 45-182 (382)
150 PRK11646 multidrug resistance 98.8 3.1E-07 6.8E-12 90.2 20.0 133 279-412 56-188 (400)
151 TIGR00886 2A0108 nitrite extru 98.8 2.6E-07 5.6E-12 89.3 19.1 107 276-383 44-151 (366)
152 PRK11273 glpT sn-glycerol-3-ph 98.8 2.2E-07 4.8E-12 92.8 18.7 138 276-413 70-212 (452)
153 PF01770 Folate_carrier: Reduc 98.8 1.9E-06 4.2E-11 82.7 23.3 124 21-144 61-186 (412)
154 TIGR00712 glpT glycerol-3-phos 98.8 1.9E-07 4.1E-12 92.9 17.2 138 276-413 68-210 (438)
155 PRK09874 drug efflux system pr 98.8 5.4E-07 1.2E-11 88.5 20.2 135 277-412 62-196 (408)
156 PRK15011 sugar efflux transpor 98.8 4.5E-08 9.7E-13 95.9 12.3 122 19-141 270-392 (393)
157 PRK09528 lacY galactoside perm 98.8 1.9E-08 4.1E-13 99.4 9.7 124 19-142 280-406 (420)
158 TIGR00890 2A0111 Oxalate/Forma 98.8 2.9E-07 6.3E-12 88.9 17.8 137 274-411 43-179 (377)
159 PRK05122 major facilitator sup 98.8 4.3E-08 9.3E-13 96.1 11.9 121 21-141 269-390 (399)
160 cd06174 MFS The Major Facilita 98.8 2.8E-07 6E-12 88.1 17.0 133 275-407 40-172 (352)
161 PRK11043 putative transporter; 98.8 7.5E-07 1.6E-11 87.4 19.6 137 276-412 48-184 (401)
162 TIGR00887 2A0109 phosphate:H+ 98.7 1.3E-06 2.7E-11 88.6 20.9 108 274-381 61-174 (502)
163 PRK10207 dipeptide/tripeptide 98.7 5.8E-07 1.3E-11 90.4 18.1 123 283-406 64-190 (489)
164 PRK11195 lysophospholipid tran 98.7 1.2E-06 2.6E-11 85.8 19.7 132 277-413 46-177 (393)
165 PRK15034 nitrate/nitrite trans 98.7 2.5E-06 5.4E-11 84.2 21.7 138 274-412 75-235 (462)
166 PRK10489 enterobactin exporter 98.7 6.8E-07 1.5E-11 88.3 17.7 137 276-413 59-200 (417)
167 PRK12382 putative transporter; 98.7 8.1E-08 1.8E-12 94.0 10.8 117 20-136 268-385 (392)
168 PRK09584 tppB putative tripept 98.7 1E-06 2.2E-11 89.0 18.8 116 286-401 74-193 (500)
169 PF05977 MFS_3: Transmembrane 98.7 1.8E-06 3.9E-11 87.1 20.0 138 276-413 52-194 (524)
170 TIGR00879 SP MFS transporter, 98.7 3.6E-07 7.8E-12 91.3 14.9 138 275-413 77-220 (481)
171 COG2271 UhpC Sugar phosphate p 98.7 2.6E-07 5.7E-12 87.5 12.1 138 276-413 71-210 (448)
172 KOG0255 Synaptic vesicle trans 98.7 4.4E-07 9.5E-12 92.4 14.9 135 275-413 124-258 (521)
173 TIGR00894 2A0114euk Na(+)-depe 98.6 3.3E-07 7.1E-12 91.9 13.3 135 278-412 85-222 (465)
174 PRK03633 putative MFS family t 98.6 2.9E-06 6.3E-11 82.7 19.2 110 275-384 47-156 (381)
175 TIGR00892 2A0113 monocarboxyla 98.6 2.2E-06 4.7E-11 85.7 18.3 130 280-410 65-195 (455)
176 TIGR00898 2A0119 cation transp 98.6 8.1E-07 1.8E-11 90.0 15.4 133 276-412 134-266 (505)
177 TIGR00899 2A0120 sugar efflux 98.6 2.6E-07 5.6E-12 89.6 11.1 122 19-141 253-375 (375)
178 PRK09556 uhpT sugar phosphate 98.6 6.9E-07 1.5E-11 89.6 14.4 134 277-410 72-213 (467)
179 PRK10406 alpha-ketoglutarate t 98.6 4.2E-06 9.2E-11 83.1 19.6 136 277-413 71-222 (432)
180 PRK10077 xylE D-xylose transpo 98.6 1.4E-06 3.1E-11 87.5 16.5 137 276-413 62-218 (479)
181 COG2814 AraJ Arabinose efflux 98.6 5.9E-06 1.3E-10 79.0 19.0 133 277-410 56-189 (394)
182 PRK15075 citrate-proton sympor 98.6 4.5E-06 9.8E-11 82.9 18.9 99 282-380 69-175 (434)
183 COG2223 NarK Nitrate/nitrite t 98.6 5.9E-06 1.3E-10 78.5 17.9 143 267-412 47-196 (417)
184 KOG2615 Permease of the major 98.6 3.2E-07 6.9E-12 85.5 9.2 134 279-413 78-217 (451)
185 TIGR00897 2A0118 polyol permea 98.5 7.1E-06 1.5E-10 80.6 19.2 111 276-386 55-170 (402)
186 PF03092 BT1: BT1 family; Int 98.5 3.9E-05 8.5E-10 75.9 24.2 127 15-141 36-177 (433)
187 PRK09705 cynX putative cyanate 98.5 4.6E-06 1E-10 81.7 16.8 124 277-401 52-176 (393)
188 KOG2325 Predicted transporter/ 98.5 2.4E-06 5.1E-11 83.7 14.2 122 23-144 93-234 (488)
189 PRK09952 shikimate transporter 98.5 1.2E-05 2.6E-10 79.9 19.8 135 278-413 73-223 (438)
190 KOG3764 Vesicular amine transp 98.5 9.3E-07 2E-11 83.0 10.5 137 279-416 116-254 (464)
191 PRK08633 2-acyl-glycerophospho 98.5 1.1E-05 2.5E-10 90.1 20.4 108 277-384 55-165 (1146)
192 PRK06814 acylglycerophosphoeth 98.4 1.6E-05 3.4E-10 88.9 21.1 136 277-413 60-198 (1140)
193 TIGR00885 fucP L-fucose:H+ sym 98.4 1.9E-05 4.1E-10 77.8 19.2 109 274-382 43-154 (410)
194 PRK11010 ampG muropeptide tran 98.4 3.1E-05 6.6E-10 78.2 19.5 129 284-413 60-198 (491)
195 TIGR01301 GPH_sucrose GPH fami 98.4 4E-05 8.6E-10 76.2 19.5 139 275-413 45-222 (477)
196 KOG0569 Permease of the major 98.4 8.8E-06 1.9E-10 80.2 14.4 125 18-143 322-458 (485)
197 KOG1330 Sugar transporter/spin 98.4 6.8E-07 1.5E-11 85.6 6.4 143 277-419 76-219 (493)
198 TIGR00901 2A0125 AmpG-related 98.4 1.6E-05 3.5E-10 76.6 16.0 128 286-413 38-182 (356)
199 TIGR00883 2A0106 metabolite-pr 98.3 1E-05 2.2E-10 78.7 14.6 101 281-381 47-155 (394)
200 KOG3098 Uncharacterized conser 98.3 0.00048 1E-08 67.5 25.1 91 19-110 68-159 (461)
201 TIGR00896 CynX cyanate transpo 98.3 2.9E-05 6.2E-10 74.9 16.6 108 276-385 42-149 (355)
202 TIGR00902 2A0127 phenyl propri 98.3 5.6E-06 1.2E-10 80.8 11.6 112 19-132 258-371 (382)
203 PF03209 PUCC: PUCC protein; 98.3 0.0021 4.6E-08 61.5 28.1 106 23-128 36-165 (403)
204 PRK10133 L-fucose transporter; 98.3 0.00018 3.8E-09 71.6 21.2 110 273-382 65-177 (438)
205 PTZ00207 hypothetical protein; 98.2 0.00013 2.7E-09 74.4 20.0 122 285-409 77-205 (591)
206 COG3104 PTR2 Dipeptide/tripept 98.2 0.00015 3.2E-09 70.8 18.3 115 22-136 82-202 (498)
207 KOG0254 Predicted transporter 98.2 3.6E-05 7.8E-10 78.2 14.6 136 275-413 95-233 (513)
208 KOG0253 Synaptic vesicle trans 98.2 4E-06 8.7E-11 77.9 6.6 120 16-140 396-519 (528)
209 PRK11902 ampG muropeptide tran 98.2 0.00024 5.2E-09 69.8 19.8 130 283-413 46-185 (402)
210 TIGR00882 2A0105 oligosacchari 98.2 1.1E-05 2.5E-10 78.9 10.2 116 19-134 272-389 (396)
211 TIGR00806 rfc RFC reduced fola 98.1 7E-05 1.5E-09 73.3 15.0 128 280-409 73-203 (511)
212 PF06609 TRI12: Fungal trichot 98.1 0.00013 2.9E-09 73.9 17.4 123 278-402 87-210 (599)
213 PF05631 DUF791: Protein of un 98.1 0.00018 3.8E-09 67.6 16.8 120 23-143 91-220 (354)
214 COG3104 PTR2 Dipeptide/tripept 98.1 7E-05 1.5E-09 72.9 14.4 134 285-420 77-217 (498)
215 PRK11128 putative 3-phenylprop 98.1 3E-05 6.6E-10 75.6 11.6 116 19-136 258-375 (382)
216 TIGR00792 gph sugar (Glycoside 98.0 6.4E-05 1.4E-09 74.6 13.1 99 20-118 276-383 (437)
217 PF02487 CLN3: CLN3 protein; 98.0 0.0037 8.1E-08 60.3 24.0 119 19-142 77-198 (402)
218 COG0477 ProP Permeases of the 97.9 7.6E-05 1.6E-09 69.2 11.1 113 19-131 57-176 (338)
219 PF03137 OATP: Organic Anion T 97.9 1.8E-06 3.8E-11 87.4 -0.2 88 55-142 142-252 (539)
220 TIGR00805 oat sodium-independe 97.9 0.0002 4.3E-09 74.4 13.7 105 279-383 78-233 (633)
221 KOG2532 Permease of the major 97.9 0.00021 4.6E-09 71.0 12.9 130 280-409 84-216 (466)
222 KOG2816 Predicted transporter 97.8 0.00021 4.6E-09 70.7 12.1 137 280-419 73-209 (463)
223 TIGR02718 sider_RhtX_FptX side 97.8 0.0002 4.4E-09 69.9 11.7 115 19-133 262-384 (390)
224 PF11700 ATG22: Vacuole efflux 97.8 0.00029 6.3E-09 70.4 12.8 123 19-141 335-469 (477)
225 PF01306 LacY_symp: LacY proto 97.7 0.00014 3.1E-09 70.4 9.2 122 19-140 277-401 (412)
226 KOG0252 Inorganic phosphate tr 97.7 3.5E-05 7.6E-10 73.9 4.4 120 23-144 370-502 (538)
227 KOG2504 Monocarboxylate transp 97.7 0.00069 1.5E-08 68.2 13.6 128 282-410 94-222 (509)
228 PF00083 Sugar_tr: Sugar (and 97.7 1.8E-06 4E-11 86.1 -5.4 105 274-378 51-158 (451)
229 PF03825 Nuc_H_symport: Nucleo 97.6 0.00063 1.4E-08 66.5 11.8 123 19-141 261-397 (400)
230 KOG3626 Organic anion transpor 97.6 0.0024 5.1E-08 65.8 15.7 89 55-143 238-346 (735)
231 PRK10429 melibiose:sodium symp 97.6 0.0011 2.3E-08 66.8 12.9 93 20-112 285-390 (473)
232 TIGR00788 fbt folate/biopterin 97.5 0.0042 9.1E-08 62.3 16.8 125 287-413 78-212 (468)
233 COG0738 FucP Fucose permease [ 97.5 0.012 2.5E-07 56.2 18.4 110 274-383 53-165 (422)
234 PF06813 Nodulin-like: Nodulin 97.5 0.0041 8.8E-08 56.3 14.3 107 274-382 42-155 (250)
235 KOG2533 Permease of the major 97.5 0.0028 6.2E-08 63.4 14.4 138 277-414 89-232 (495)
236 PRK09848 glucuronide transport 97.5 0.0014 3E-08 65.4 12.3 92 21-112 284-385 (448)
237 PRK09669 putative symporter Ya 97.4 0.0015 3.2E-08 65.1 12.1 94 20-113 283-386 (444)
238 PF05978 UNC-93: Ion channel r 97.4 0.0013 2.8E-08 55.0 9.0 93 19-112 55-148 (156)
239 KOG3762 Predicted transporter 97.3 0.0034 7.4E-08 61.8 12.1 129 276-404 413-542 (618)
240 COG2270 Permeases of the major 97.3 0.001 2.3E-08 63.6 8.3 126 13-141 303-430 (438)
241 KOG3762 Predicted transporter 97.2 0.0012 2.7E-08 64.8 8.2 116 23-138 428-545 (618)
242 PF13347 MFS_2: MFS/sugar tran 97.2 0.0025 5.4E-08 63.2 10.3 125 287-411 55-200 (428)
243 PRK11462 putative transporter; 97.1 0.028 6E-07 56.3 16.9 131 281-411 57-206 (460)
244 PF06813 Nodulin-like: Nodulin 97.1 0.0085 1.8E-07 54.3 11.8 121 19-140 54-182 (250)
245 KOG3810 Micronutrient transpor 97.1 0.0032 7E-08 58.5 9.0 121 23-143 64-186 (433)
246 COG2211 MelB Na+/melibiose sym 97.0 0.019 4.1E-07 56.6 14.1 95 18-112 289-393 (467)
247 TIGR00769 AAA ADP/ATP carrier 96.8 0.28 6E-06 49.0 20.7 44 339-382 145-189 (472)
248 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.078 1.7E-06 55.2 15.8 123 284-407 38-180 (654)
249 PF05631 DUF791: Protein of un 96.6 0.19 4E-06 47.7 16.7 133 282-415 82-222 (354)
250 TIGR01272 gluP glucose/galacto 96.5 0.02 4.3E-07 54.1 9.9 106 19-127 196-302 (310)
251 PF13000 Acatn: Acetyl-coenzym 96.4 1.2 2.6E-05 44.2 23.7 44 340-383 423-466 (544)
252 KOG4332 Predicted sugar transp 96.3 0.3 6.5E-06 44.2 15.3 89 21-112 92-186 (454)
253 PF03092 BT1: BT1 family; Int 96.3 0.044 9.5E-07 54.4 11.3 129 287-415 42-181 (433)
254 KOG0637 Sucrose transporter an 96.1 0.043 9.3E-07 53.3 10.0 91 19-109 82-199 (498)
255 PF06963 FPN1: Ferroportin1 (F 96.1 1.6 3.4E-05 43.1 27.8 100 276-375 300-409 (432)
256 KOG2563 Permease of the major 96.1 0.11 2.3E-06 50.5 12.3 108 276-383 86-201 (480)
257 PF00854 PTR2: POT family; In 95.7 0.06 1.3E-06 52.2 9.5 105 32-136 2-119 (372)
258 KOG2325 Predicted transporter/ 95.6 0.33 7.1E-06 48.2 13.9 137 277-414 79-234 (488)
259 TIGR00926 2A1704 Peptide:H+ sy 95.5 0.2 4.3E-06 52.3 12.5 109 27-135 50-177 (654)
260 PF07672 MFS_Mycoplasma: Mycop 95.2 1.1 2.5E-05 40.4 14.5 55 84-138 1-60 (267)
261 TIGR00769 AAA ADP/ATP carrier 94.9 4.6 0.0001 40.4 29.8 39 75-113 151-189 (472)
262 PF05978 UNC-93: Ion channel r 94.9 0.93 2E-05 37.9 12.6 104 275-379 43-146 (156)
263 PF03209 PUCC: PUCC protein; 94.6 0.49 1.1E-05 45.6 11.6 47 340-386 107-153 (403)
264 KOG3574 Acetyl-CoA transporter 94.4 5.2 0.00011 38.5 17.7 44 340-383 387-430 (510)
265 KOG4686 Predicted sugar transp 93.9 0.31 6.7E-06 44.6 8.0 105 23-128 322-430 (459)
266 PF03219 TLC: TLC ATP/ADP tran 93.4 9.5 0.00021 38.4 19.2 42 342-383 164-205 (491)
267 COG0477 ProP Permeases of the 93.1 1.2 2.6E-05 40.6 11.3 105 279-383 49-157 (338)
268 COG2807 CynX Cyanate permease 90.2 4 8.7E-05 38.9 10.9 117 18-135 260-380 (395)
269 PF12832 MFS_1_like: MFS_1 lik 88.9 4.9 0.00011 29.0 8.4 37 271-307 37-73 (77)
270 PF01770 Folate_carrier: Reduc 88.7 26 0.00055 34.4 15.8 123 287-411 59-184 (412)
271 PF02487 CLN3: CLN3 protein; 84.7 4 8.8E-05 39.7 7.8 64 49-112 330-394 (402)
272 KOG1237 H+/oligopeptide sympor 84.1 55 0.0012 33.8 20.1 125 23-149 95-252 (571)
273 PF00854 PTR2: POT family; In 81.7 8.6 0.00019 37.2 9.0 68 341-408 52-122 (372)
274 TIGR00939 2a57 Equilibrative N 80.4 65 0.0014 32.0 26.4 41 335-375 384-425 (437)
275 PF13000 Acatn: Acetyl-coenzym 79.1 26 0.00056 35.2 11.0 22 391-412 203-224 (544)
276 KOG3880 Predicted small molecu 70.6 5.6 0.00012 37.1 3.8 123 10-141 73-201 (409)
277 PRK10697 DNA-binding transcrip 66.2 11 0.00023 29.7 4.1 51 113-163 31-87 (118)
278 PF06779 DUF1228: Protein of u 65.8 51 0.0011 24.3 7.4 44 277-320 35-78 (85)
279 KOG3098 Uncharacterized conser 64.0 78 0.0017 31.6 10.6 99 277-378 58-158 (461)
280 KOG3880 Predicted small molecu 60.7 37 0.0008 31.9 7.1 73 38-110 326-399 (409)
281 PRK03612 spermidine synthase; 59.2 2.1E+02 0.0046 29.2 19.6 41 357-397 144-185 (521)
282 KOG3097 Predicted membrane pro 57.7 28 0.00061 32.9 5.9 89 19-108 76-176 (390)
283 PF06963 FPN1: Ferroportin1 (F 56.0 2.2E+02 0.0047 28.3 20.6 39 369-407 160-198 (432)
284 PF01733 Nucleoside_tran: Nucl 55.1 4.6 9.9E-05 38.0 0.4 35 336-370 261-296 (309)
285 TIGR02978 phageshock_pspC phag 55.0 31 0.00067 27.4 5.0 33 113-145 26-64 (121)
286 PF11947 DUF3464: Protein of u 54.1 61 0.0013 26.8 6.7 81 23-105 56-146 (153)
287 PF04024 PspC: PspC domain; I 53.8 17 0.00036 24.9 2.9 31 113-143 26-60 (61)
288 PF03219 TLC: TLC ATP/ADP tran 53.6 2.5E+02 0.0055 28.4 27.8 37 78-114 169-205 (491)
289 KOG3626 Organic anion transpor 51.4 56 0.0012 34.6 7.5 43 342-384 606-649 (735)
290 KOG3574 Acetyl-CoA transporter 46.0 56 0.0012 31.8 6.0 31 287-317 81-117 (510)
291 PF11947 DUF3464: Protein of u 45.4 1.1E+02 0.0023 25.5 6.8 80 291-371 56-143 (153)
292 PF06341 DUF1056: Protein of u 44.0 20 0.00043 24.6 2.0 36 53-88 27-62 (63)
293 COG5336 Uncharacterized protei 42.3 1.2E+02 0.0026 23.4 6.1 53 353-405 37-91 (116)
294 PF01528 Herpes_glycop: Herpes 40.1 1.3E+02 0.0028 29.1 7.5 43 78-123 259-306 (374)
295 KOG2881 Predicted membrane pro 36.9 3.3E+02 0.0072 24.8 11.6 32 280-311 251-282 (294)
296 COG3202 ATP/ADP translocase [E 34.4 5E+02 0.011 26.3 20.9 36 79-114 174-209 (509)
297 COG4708 Predicted membrane pro 32.6 68 0.0015 26.1 3.7 29 272-300 137-165 (169)
298 PF11151 DUF2929: Protein of u 30.2 1.7E+02 0.0038 19.6 6.6 44 100-143 13-56 (57)
299 KOG0637 Sucrose transporter an 29.6 1.3E+02 0.0029 30.0 5.8 37 338-374 158-195 (498)
300 PF07857 DUF1632: CEO family ( 24.6 2.1E+02 0.0046 26.0 5.9 70 343-412 64-139 (254)
301 PF06779 DUF1228: Protein of u 23.5 3.1E+02 0.0066 20.2 7.0 41 92-132 30-70 (85)
302 COG3202 ATP/ADP translocase [E 22.7 8.2E+02 0.018 24.8 18.9 41 342-382 168-208 (509)
303 TIGR00939 2a57 Equilibrative N 21.3 1.5E+02 0.0032 29.5 4.7 61 52-112 370-431 (437)
304 PHA03242 envelope glycoprotein 21.3 6.7E+02 0.015 24.8 8.9 9 78-86 273-281 (428)
305 PF13829 DUF4191: Domain of un 20.5 4.3E+02 0.0092 23.5 6.7 49 117-165 50-100 (224)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=9.3e-52 Score=373.12 Aligned_cols=406 Identities=37% Similarity=0.566 Sum_probs=334.3
Q ss_pred CCccccccccCCCCchhhhhhh---hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhh
Q 013910 1 MEEGRFSSLLHPDMCPKLLLEP---LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSW 77 (434)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~ 77 (434)
|+||+.+.+-+-+-||+++=.= ...|++|||+.+.++.+...+...+.+.++|+..+.+.|.+.|+|+|+.++..++
T Consensus 110 ~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~ 189 (528)
T KOG0253|consen 110 PSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAI 189 (528)
T ss_pred hhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHH
Confidence 4677777776668888664322 4789999999999999999999999999999999999999999999998888888
Q ss_pred hhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHH
Q 013910 78 FMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHN 157 (434)
Q Consensus 78 ~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~ 157 (434)
..|+.|..+|+..+-+. ..|.+|.+....+++..+...||||..+....|..+...+.+++||||||++.||+.++|.+
T Consensus 190 yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAle 268 (528)
T KOG0253|consen 190 YLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALE 268 (528)
T ss_pred HHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHH
Confidence 89999999999998877 99999999999999999999999999999889999888889999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHH
Q 013910 158 ILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSF 237 (434)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (434)
.+++++++|++..+...+.....++.+++ +....+. +.+..++.-....++++|+.||+++.+|.+||+|.+
T Consensus 269 tL~kiArmNg~qlplgvl~~s~~~~~e~e------~~~~~~~--~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnaf 340 (528)
T KOG0253|consen 269 TLHKIARMNGKQLPLGVLESSAIDRQEQE------ESDLDDS--KSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAF 340 (528)
T ss_pred HHHHHHHhcCCCCCcceeeeehhhhhhhh------hhchhhh--hhccccccccchHhhcChHHHHHHHHHHHHHHhhHH
Confidence 99999999998776554433322221111 0000000 111112233456688999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCccc------ccc---cCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHH
Q 013910 238 VYYGIVLLASELSGSQSKCSSSI------LLS---ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIF 308 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~ 308 (434)
.||+..++...+..+...|+... ... .......-|.+.++.++.++||.++.+++.||+|||+.++.+.++
T Consensus 341 syyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~ 420 (528)
T KOG0253|consen 341 SYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLIL 420 (528)
T ss_pred HHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHH
Confidence 99999998877765433222110 000 112334558999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchh
Q 013910 309 VCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT 388 (434)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~ 388 (434)
++++++.+.........+.+++.+..|..+.+...|+|++|++||.+|++|.|.|.+++|+|++++|++. +......+
T Consensus 421 f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~s 498 (528)
T KOG0253|consen 421 FGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTS 498 (528)
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhcccee
Confidence 9999888776655556667788888899999999999999999999999999999999999999999988 34434456
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccCCccc
Q 013910 389 AAILLLEALIVLSVVVILLIPFETKGKEL 417 (434)
Q Consensus 389 ~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 417 (434)
.+..+++.+++++++.+.++|-|||||++
T Consensus 499 l~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 499 LPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred ehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 88899999999999999999999999976
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-43 Score=338.99 Aligned_cols=370 Identities=22% Similarity=0.326 Sum_probs=278.4
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhh---cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAF---SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVF 94 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~---~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~ 94 (434)
+..+.+.||+|||.++.++.++..++++++.+ .+++++++++|++.|+..|... ....|+.|++|++.||....+.
T Consensus 78 ~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~ 157 (485)
T KOG0569|consen 78 FSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLL 157 (485)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHH
Confidence 56678999999999999999999988877755 4789999999999999988875 4456899999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--HHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhh-cCChHHHHHHHHHHHHHcCCCCC
Q 013910 95 STFWTFGSVSEAALAW--IVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCT-KGRITDAHNILDKIAQFNQTSLP 171 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~--~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~ 171 (434)
+.+..+|.+++..++. .+.+...|++.+.+..+|+++......++||||+||.. |||.+||+++++++++.++.+
T Consensus 158 ~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~-- 235 (485)
T KOG0569|consen 158 QIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVE-- 235 (485)
T ss_pred HHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcch--
Confidence 9999999999987653 45677789999999999999999999999999999999 899999999999986532210
Q ss_pred CCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHHHHHHHHH------HHHHHHHHHH
Q 013910 172 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFG------NSFVYYGIVL 244 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~------~~~~~~~~~~ 244 (434)
.+.+++.++.++ ++..++...++.+++ ++++|+...+...+.+. +...+|+..+
T Consensus 236 ---------~~~e~~~~e~~~----------~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i 296 (485)
T KOG0569|consen 236 ---------AEIEEMLREIEE----------EELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSI 296 (485)
T ss_pred ---------hHHHHHHHHHHH----------hccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHH
Confidence 000000000000 000001112444555 45666665555444443 3445666655
Q ss_pred HHHhhhcccCCCCcccccccCcc-chhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh---h-
Q 013910 245 LASELSGSQSKCSSSILLSENVQ-DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---L- 319 (434)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~---~- 319 (434)
+... +.. +...+. ....+...++..+++.++.||.|||++++.+...+.+..+.+.. .
T Consensus 297 ~~~a----------------G~~~~~a~~a-n~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~ 359 (485)
T KOG0569|consen 297 FKTA----------------GFTPEEAQYA-NLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLS 359 (485)
T ss_pred HHHc----------------CCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5421 111 122333 44556778999999999999999999999988887765544331 1
Q ss_pred h-h-hHHH----HHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHH
Q 013910 320 Q-S-NILL----TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 393 (434)
Q Consensus 320 ~-~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~ 393 (434)
+ . .+.. .+.......+..|+.++.|.+.+|++|++.|+.|.+++..++|+..++..+.++.+.+..|. ..+++
T Consensus 360 ~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~fil 438 (485)
T KOG0569|consen 360 NSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFIL 438 (485)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHH
Confidence 1 1 1211 12222333455688899999999999999999999999999999999999999988888776 67888
Q ss_pred HHHHHHHHHHHHHhcccccCCcccccccccccCc
Q 013910 394 LEALIVLSVVVILLIPFETKGKELVNTIDGVSNS 427 (434)
Q Consensus 394 ~~~~~~i~~~~~~~~~~et~~~~~~e~~~~~~~~ 427 (434)
+++.+.+..+..+++.||||||+..|+.++.++.
T Consensus 439 F~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 439 FVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999999998876654
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=9.7e-42 Score=350.33 Aligned_cols=395 Identities=25% Similarity=0.382 Sum_probs=283.7
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
..++.||+|||+.+++++++++++++++++++++..++++|++.|+|.|+. ++...++.|++|+++||+..++.+.++.
T Consensus 222 ~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~ 301 (742)
T TIGR01299 222 WGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWM 301 (742)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999876 4567789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-------------ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHc
Q 013910 100 FGSVSEAALAWIVMP-------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFN 166 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~-------------~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~ 166 (434)
+|.++++.+++.+.+ ..+||+++++.++|+++.++.++++||||+|+..++|.+||.+.++++++.|
T Consensus 302 iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 302 IGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred HHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 999999988766543 2479999999999988888888899999999999999999999999998766
Q ss_pred CCCCCC--CCccC---CCCCCCcccccCCCCcc--ccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHH
Q 013910 167 QTSLPS--GNLTS---DGTNDLDEEFSTSEETP--LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVY 239 (434)
Q Consensus 167 ~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (434)
.+.... ..... +...+.++..+..+... ..+...+........+..+..+|++++++++++++.+|++..+.|
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~y 461 (742)
T TIGR01299 382 MRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGY 461 (742)
T ss_pred CCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence 432110 00000 00000000000000000 000000000011112234667889999999999999999999999
Q ss_pred HHHHHHHHhhhccc---C--------------------------------------------------------------
Q 013910 240 YGIVLLASELSGSQ---S-------------------------------------------------------------- 254 (434)
Q Consensus 240 ~~~~~~~~~~~~~~---~-------------------------------------------------------------- 254 (434)
|++..|.|.+.... .
T Consensus 462 ygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (742)
T TIGR01299 462 YGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTS 541 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccc
Confidence 99999988653210 0
Q ss_pred ------CCCccc-----------------------cc-c--cC-------ccchhHHHHHHHHHhhhhhHHHHHHHHHHh
Q 013910 255 ------KCSSSI-----------------------LL-S--EN-------VQDASVYINVFITSFAELPGLLTAALLVDR 295 (434)
Q Consensus 255 ------~~~~~~-----------------------~~-~--~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr 295 (434)
+|.-.. +. . .+ ......|...++.+++.++|.+++++++||
T Consensus 542 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr 621 (742)
T TIGR01299 542 SNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDK 621 (742)
T ss_pred cchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00 0 00 000124666777788999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHH
Q 013910 296 VGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 375 (434)
Q Consensus 296 ~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p 375 (434)
+|||++++++.++.+++.+.+.+..+......+.+...++..+.++..+.+.+|++|++.|++++|++++.+++|++++|
T Consensus 622 ~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp 701 (742)
T TIGR01299 622 IGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGI 701 (742)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888887776665544332222222222222333456678889999999999999999999999999999999
Q ss_pred HHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccc
Q 013910 376 LVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKEL 417 (434)
Q Consensus 376 ~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~ 417 (434)
++.+.+.+. +...++++++++.++++++.+++ |||+++.+
T Consensus 702 ~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET~~~~l 741 (742)
T TIGR01299 702 LIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDTRGQVL 741 (742)
T ss_pred HHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCCccccc
Confidence 998877664 34567777888878877777766 79999865
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.7e-39 Score=327.70 Aligned_cols=376 Identities=21% Similarity=0.272 Sum_probs=252.3
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhccc------HHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV 93 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~------~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~ 93 (434)
..++.||+|||+.+.++.+++.+++++++++++ +..++++|++.|++.|... ....|++|++|+++||+..++
T Consensus 76 ~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~ 155 (502)
T TIGR00887 76 FGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAA 155 (502)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHH
Confidence 346899999999999999999999999888876 7899999999999999864 566789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-----------------------ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcC
Q 013910 94 FSTFWTFGSVSEAALAWIVMP-----------------------ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKG 150 (434)
Q Consensus 94 ~~~~~~~G~~l~~~l~~~~~~-----------------------~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~ 150 (434)
.+.++.+|.++++.++..+.. .++||++|.++++|+++..+.++++||||+|+..|+
T Consensus 156 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~ 235 (502)
T TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA 235 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhC
Confidence 999999999998887765421 247999999999999988888889999999999998
Q ss_pred ChH-HHHHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccC----cchHHHH
Q 013910 151 RIT-DAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS----PRFFKTT 225 (434)
Q Consensus 151 ~~~-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 225 (434)
|.+ ++.+.+++..+.+. +++ .++.++..++ +++ .+ .+++++++ +++++.+
T Consensus 236 ~~~~~a~~~~~~~~~~~~---~~~------~~~~~~~~~~----------~~~---~~---~~~~~l~~~~~~~~~~~~~ 290 (502)
T TIGR00887 236 KDVEQAASDMSAVLQVKI---EAE------PDEVEKASTA----------VEV---PK---ASWSDFFTHFFKWRHGKHL 290 (502)
T ss_pred cchHHHHHHHHHHhcccc---ccC------cccccchhcc----------ccc---hh---hhHHHHHHHHhhhHHHHHH
Confidence 875 46766666542110 000 0000000000 000 00 12233332 2333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccc-cCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHH
Q 013910 226 ILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLS-ENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTI 304 (434)
Q Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~ 304 (434)
+.+...++.+.+.+|+...+.+.+....+......... ....-........+..++.++|.+++++++||+|||+.++.
T Consensus 291 ~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~ 370 (502)
T TIGR00887 291 LGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHH
Confidence 44455566667777877665554432211100000000 00000011112334455677899999999999999999887
Q ss_pred HHHHHHHHHHHHHhhh---h-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHH
Q 013910 305 MFIFVCIFLLPLVTLQ---S-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVG 380 (434)
Q Consensus 305 ~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~ 380 (434)
+..+.++.+..+.... . ............++..+..+..|.+++|++|++.|+++.|+.+++++++++++|++.++
T Consensus 371 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~ 450 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLY 450 (502)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 7666555443332211 1 11111111122222345566788899999999999999999999999999999999998
Q ss_pred Hhhhc----------chhhHHHHHHHHHHHHHHHHHhcccccCCcccccccc
Q 013910 381 LVTSC----------HQTAAILLLEALIVLSVVVILLIPFETKGKELVNTID 422 (434)
Q Consensus 381 l~~~~----------g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~e~~~ 422 (434)
+.+.. +....+++++++++++.+.. ++.||||+|+++|+.+
T Consensus 451 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 451 LAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred hhccccccccccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 87742 22346778888888776655 5668999999988654
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.7e-37 Score=310.65 Aligned_cols=353 Identities=33% Similarity=0.568 Sum_probs=266.3
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+.||+|||++++++.++..+++++.++++|+..++++|++.|++.+.. .....++.|++|+++|++..++.+.++.+|
T Consensus 149 ~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g 228 (505)
T TIGR00898 149 YLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLG 228 (505)
T ss_pred HhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999885 456678899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 181 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
.++++.+++.+. +||+.|++.+++.++..+..+++||||+|+..++|.+++.+.+++.++.++.+.+++.
T Consensus 229 ~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~------- 298 (505)
T TIGR00898 229 LVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEV------- 298 (505)
T ss_pred HHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHH-------
Confidence 999998887764 4999999999998887777788999999999999999999999998877654211100
Q ss_pred CCcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 013910 182 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 260 (434)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (434)
.+. +.+++ .+.. ++ ....++++ +++.++.+...+..++.+.+.+|++..+.+.+.
T Consensus 299 --~~~--~~~~~------~~~~---~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 354 (505)
T TIGR00898 299 --LSL--SLEKD------LSSS---KK-QYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG---------- 354 (505)
T ss_pred --Hhh--hhhhh------hhhc---cC-CCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC----------
Confidence 000 00000 0000 00 01233444 456666666667777777777777665443221
Q ss_pred ccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHhh
Q 013910 261 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSN--ILLTALLSGARMFSMG 338 (434)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 338 (434)
.+.+...++.++.++++.+++++++||+|||+.+..+.+++++.++.+....+. +......+...++..+
T Consensus 355 --------~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (505)
T TIGR00898 355 --------GNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITS 426 (505)
T ss_pred --------CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 123556667778889999999999999999999988877777665544432221 2222233333334445
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcccc
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELV 418 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~ 418 (434)
.++..+.+.+|++|++.|+++.|+.++++++|++++|++.+ +.+ .+...++++++++++++++..+++ |||++++++
T Consensus 427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l-pet~~~~l~ 503 (505)
T TIGR00898 427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGILTLFL-PETKGVPLP 503 (505)
T ss_pred HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHHHHcC-cCCCCCCCC
Confidence 56778899999999999999999999999999999999887 433 345567788888888887776655 799999988
Q ss_pred cc
Q 013910 419 NT 420 (434)
Q Consensus 419 e~ 420 (434)
|+
T Consensus 504 ~t 505 (505)
T TIGR00898 504 ET 505 (505)
T ss_pred CC
Confidence 74
No 6
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=299.63 Aligned_cols=369 Identities=23% Similarity=0.341 Sum_probs=263.4
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.....|++|||++++++.+++.++++++++++|+.+++++|++.|+|.|... +...|.+|.+|++.||...+..+..+.
T Consensus 109 ~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~ 188 (513)
T KOG0254|consen 109 AGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFIT 188 (513)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHH
Confidence 3469999999999999999999999999999999999999999999999875 556689999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 100 FGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~-~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
+|.+++..+++...+. .+||+.+.+..+|+++..+..+++||||+|+.++||.++|+++++++.+.++.+
T Consensus 189 ~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~--------- 259 (513)
T KOG0254|consen 189 IGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPED--------- 259 (513)
T ss_pred HHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcc---------
Confidence 9999997766665433 589999999999999998888889999999999999999999999987532100
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHH------HHHHHHHHHHhhhcc
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSF------VYYGIVLLASELSGS 252 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~ 252 (434)
.+.+.++.. .... .+... ......+.+++.++.+++..+...+...+.+ .||+..++...
T Consensus 260 ~~~~~~~~~-----~~~~---~~~~~--~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~---- 325 (513)
T KOG0254|consen 260 VEVELELLK-----IKLL---VEAEV--AEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA---- 325 (513)
T ss_pred hHHHHHHHH-----HHHH---Hhhhc--ccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc----
Confidence 000000000 0000 00000 0000124455556677777665444433332 23443332211
Q ss_pred cCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh--hh--h-------
Q 013910 253 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT--LQ--S------- 321 (434)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~--~~--~------- 321 (434)
+..+.. ....++.++.++++.+++.++.||+|||+.++.+.....+..+.+.. .. .
T Consensus 326 ------------g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~ 392 (513)
T KOG0254|consen 326 ------------GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKG 392 (513)
T ss_pred ------------CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 111111 45667777888999999999999999999999887766655443321 11 0
Q ss_pred -hHHHH-HHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHH
Q 013910 322 -NILLT-ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIV 399 (434)
Q Consensus 322 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~ 399 (434)
.+... ........+..+..++.|.+.+|++|.+.|+++.+++..+++..+.+....++.+....+....+.++++.+.
T Consensus 393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~ 472 (513)
T KOG0254|consen 393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICL 472 (513)
T ss_pred hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH
Confidence 11111 1122222344566788899999999999999999999999999888777776665554322356667777777
Q ss_pred HHHH-HHHhcccccCCccccccccccc
Q 013910 400 LSVV-VILLIPFETKGKELVNTIDGVS 425 (434)
Q Consensus 400 i~~~-~~~~~~~et~~~~~~e~~~~~~ 425 (434)
+... +++++.|||||++++|+.+...
T Consensus 473 ~~~~~fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 473 LSLIIFVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred HHHHHHheEEcccCCCCcHHHHHHHHH
Confidence 7777 8899999999999998866443
No 7
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=294.07 Aligned_cols=364 Identities=32% Similarity=0.450 Sum_probs=271.7
Q ss_pred hHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHHH
Q 013910 24 YFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 102 (434)
Q Consensus 24 ~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 102 (434)
+.||+|||++++.++++.+++++.+++++|+..+++.|+++|++.++.. +...+++|+.++++|+.+..+....+..|.
T Consensus 141 lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~ 220 (521)
T KOG0255|consen 141 LSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGL 220 (521)
T ss_pred hHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999988764 667788999999999999999555666555
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCCC
Q 013910 103 VSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTND 182 (434)
Q Consensus 103 ~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 182 (434)
+..+..+++.. +||+.+++..+|+++.++.++..||||||+..+||.++|.+.++++++.|+.+....+.
T Consensus 221 ~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~------- 290 (521)
T KOG0255|consen 221 MLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKEL------- 290 (521)
T ss_pred HHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHH-------
Confidence 55555555542 99999999999999887777777799999999999999999999999877432211100
Q ss_pred CcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 013910 183 LDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 261 (434)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (434)
.+... . .+.++. ...++...+.+++ .++.++.++.+...++.....||++.+....+.
T Consensus 291 ~~~~~---~-----~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg----------- 349 (521)
T KOG0255|consen 291 LRLEL---L-----LRPLKL--LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLG----------- 349 (521)
T ss_pred HHHHH---H-----hhHhhh--hccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcC-----------
Confidence 00000 0 000000 0001111244444 456888888888888888889999877654332
Q ss_pred cccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHHhh
Q 013910 262 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMG 338 (434)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 338 (434)
.+.|....+......++....+...|+.|||..+..+..+..+.++...+.. .. +........+.++...
T Consensus 350 -------~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (521)
T KOG0255|consen 350 -------GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGS 422 (521)
T ss_pred -------chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Confidence 3456666676778899999999999999999999988888777666554422 11 1233344444555556
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcccc
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELV 418 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~ 418 (434)
.+.+.+.+.+|++||..|+++.+.++.+++++++++|++...... ........+++..+.+.+++...+.|||+++.++
T Consensus 423 ~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~ 501 (521)
T KOG0255|consen 423 AFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLP 501 (521)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCc
Confidence 667779999999999999999999999999999999987653322 2333344446777788888887788999999999
Q ss_pred cccccccC
Q 013910 419 NTIDGVSN 426 (434)
Q Consensus 419 e~~~~~~~ 426 (434)
|+.++.++
T Consensus 502 ~t~~~~~~ 509 (521)
T KOG0255|consen 502 GTLLDAEN 509 (521)
T ss_pred hhHHHHHh
Confidence 88777663
No 8
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.9e-42 Score=343.77 Aligned_cols=368 Identities=29% Similarity=0.485 Sum_probs=258.0
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSP---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVF 94 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~---~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~ 94 (434)
++.+.+.||+|||+++.++.++..+++++.++++ |+..+.++|+++|+|.|... +...|+.|.+|+++||+..++.
T Consensus 64 ~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~ 143 (451)
T PF00083_consen 64 LIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLF 143 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4445689999999999999999999999999999 99999999999999999875 5567889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---cchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCC
Q 013910 95 STFWTFGSVSEAALAWIVMPI---LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 171 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~~---~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 171 (434)
+.++.+|.+++..+++...+. ++||+.+.+..+|+++..+..+++||||+|+..|+|.|||++.++++++.+..+
T Consensus 144 ~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~-- 221 (451)
T PF00083_consen 144 QLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIED-- 221 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccccccccccccccccccccc--
Confidence 999999999998887765433 459999999999998888888899999999999999999999998854321110
Q ss_pred CCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCc-chHHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Q 013910 172 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSP-RFFKTTILLWVLYFGNSFVY-YGIVLLASEL 249 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 249 (434)
++.+++.++.++.+ +.+ ..+.++++. +++++..........+.+.. +....+.+.+
T Consensus 222 ---------~~~~~~~~~~~~~~----------~~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i 279 (451)
T PF00083_consen 222 ---------EEIEEIKAEKKESQ----------ESK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSI 279 (451)
T ss_pred ---------cccccccccccccc----------ccc---eeeeecccccccccccccccccccccccccccccccccccc
Confidence 01111111000000 000 123334433 33444444333332222211 1122222222
Q ss_pred hcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---h--hhh---
Q 013910 250 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T--LQS--- 321 (434)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~--~~~--- 321 (434)
.... +... . +...++..+..+++.+++.+++||+|||+.++.+..+++++...+. . ...
T Consensus 280 ~~~~-----------~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (451)
T PF00083_consen 280 FENA-----------GISN-S-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSW 346 (451)
T ss_pred cccc-----------cccc-c-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1110 0111 1 2333455566777888888999999999998887766665444332 1 111
Q ss_pred -hHHHHHHHHHH-HHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHH
Q 013910 322 -NILLTALLSGA-RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIV 399 (434)
Q Consensus 322 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~ 399 (434)
........... ..+..+..+..+.+.+|+||++.|+++.|+++.++++++++.|++.+.+.+..+....+.+++++++
T Consensus 347 ~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 347 WSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCL 426 (451)
T ss_pred cccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHH
Confidence 11111111111 1223355677889999999999999999999999999999999988877766554567788888889
Q ss_pred HHHHHHHhcccccCCccccccccc
Q 013910 400 LSVVVILLIPFETKGKELVNTIDG 423 (434)
Q Consensus 400 i~~~~~~~~~~et~~~~~~e~~~~ 423 (434)
+..++.+++.||||||+++|+.++
T Consensus 427 i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 427 IAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HHHhheeEEEeeCCCCCHHHHHhh
Confidence 999999999999999999998753
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=3e-32 Score=274.01 Aligned_cols=340 Identities=15% Similarity=0.156 Sum_probs=220.3
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHH--------HHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYIS--------LLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV 93 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~--------l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~ 93 (434)
.+.||+|||+++..+.++++++++++++++|+.+ ++++|+++|+|.|+.. +...+++|++|+++||++.++
T Consensus 79 ~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~ 158 (490)
T PRK10642 79 MLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSW 158 (490)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHH
Confidence 5899999999999999999999999999999975 8999999999999875 556788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHH
Q 013910 94 FSTFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQF 165 (434)
Q Consensus 94 ~~~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~ 165 (434)
.+.+..+|.++++.+...+. +.+|||++|++.++++++.++++..+||||+|...+++.++..+
T Consensus 159 ~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~-------- 230 (490)
T PRK10642 159 LDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR-------- 230 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc--------
Confidence 99999999888886654332 35799999999887777666667789999998643322111000
Q ss_pred cCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 166 NQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLL 245 (434)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (434)
+.. .+ + .+. ++..++++ +++.+.......+.....+|+...+
T Consensus 231 ------------------~~~-~~--~-------------~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (490)
T PRK10642 231 ------------------EGL-QD--G-------------PKV---SFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTY 272 (490)
T ss_pred ------------------ccc-cc--c-------------ccC---CHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 0 000 11222222 2333333334444455666666665
Q ss_pred HHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHH-HH--hhhhh
Q 013910 246 ASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LV--TLQSN 322 (434)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~-~~--~~~~~ 322 (434)
.+.+..... +.+............++.+++.+++++++||+|||+.+..+.+...+.... +. ...+.
T Consensus 273 ~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (490)
T PRK10642 273 MPSYLSHNL----------HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVI 342 (490)
T ss_pred HHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 554432110 111111122233445667788889999999999999887665433322221 11 11111
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch-hhHHHHHHHHHHHH
Q 013910 323 ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLS 401 (434)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~-~~~~~~~~~~~~i~ 401 (434)
...........++..+..+....+.+|++|++.|+++.|+.+.++++++.++|++.+++.+..+. ..+..+..+.++++
T Consensus 343 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 343 GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 11111111111111223345567778999999999999999999999899999999988775442 34444555566666
Q ss_pred HHHHHhcccccCCccccc
Q 013910 402 VVVILLIPFETKGKELVN 419 (434)
Q Consensus 402 ~~~~~~~~~et~~~~~~e 419 (434)
.+..+++ ||++++.+++
T Consensus 423 ~~~~~~~-pes~~~~~~~ 439 (490)
T PRK10642 423 LITGVTM-KETANRPLKG 439 (490)
T ss_pred HHHHHHh-ccccCCCCCC
Confidence 6665555 8998776643
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.1e-32 Score=274.85 Aligned_cols=363 Identities=21% Similarity=0.250 Sum_probs=235.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhc------------ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcch
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFS------------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRG 88 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~------------~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg 88 (434)
.++.||+|||+++.++.+++.++.+.++++ +++..++++|+++|++.|... ....++.|++|+++||
T Consensus 76 G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg 155 (479)
T PRK10077 76 GYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRG 155 (479)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhh
Confidence 368999999999999999999888877763 235678999999999999864 5567889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHH
Q 013910 89 KWMVVFSTFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILD 160 (434)
Q Consensus 89 ~~~~~~~~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~ 160 (434)
+.+++.+.+..+|.++++.++..+. +..+||++|++.+++.++..+..+++||||+|+..+++.+++.+.++
T Consensus 156 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~ 235 (479)
T PRK10077 156 KLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILR 235 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHH
Confidence 9999999999999999887765542 35689999999988888877777789999999998999888877666
Q ss_pred HHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHH-H-HHHHHHHHH
Q 013910 161 KIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILL-W-VLYFGNSFV 238 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~-~~~~~~~~~ 238 (434)
+..+.+. .+...++ ... ..+++ . + . ....+. ........ . ...+.+...
T Consensus 236 ~~~~~~~---------------~~~~~~~-----~~~-~~~~~-~-~-~---~~~~~~--~~~~~~~~~~~~~~~~~~~~ 286 (479)
T PRK10077 236 KIMGNTL---------------ATQALQE-----IKH-SLDHG-R-K-T---GGKLLM--FGVGVIVIGVMLSVFQQFVG 286 (479)
T ss_pred HHcCChh---------------HHHHHHH-----HHH-HHHHh-h-h-h---hhhhcc--hhHHHHHHHHHHHHHHHHhC
Confidence 5421100 0000000 000 00000 0 0 0 000010 00011111 1 111112222
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh
Q 013910 239 YYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~ 318 (434)
++....+.+.+.... +..............+.++++.+++++++||+|||+.++.+.++..+..+.+..
T Consensus 287 ~~~~~~~~p~i~~~~-----------g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~ 355 (479)
T PRK10077 287 INVVLYYAPEIFKTL-----------GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT 355 (479)
T ss_pred hhHHHHHHHHHHHHc-----------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHH
Confidence 223333333332111 111111223334456677889999999999999999998877766655443322
Q ss_pred h--hh-hH-HHH-HHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh------hhcch
Q 013910 319 L--QS-NI-LLT-ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV------TSCHQ 387 (434)
Q Consensus 319 ~--~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~------~~~g~ 387 (434)
. .+ .. ... ........+.....+..+.+.+|++|++.|+++.|++++++++++++++.+.+.+. +..+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~ 435 (479)
T PRK10077 356 AFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN 435 (479)
T ss_pred HHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC
Confidence 1 11 11 111 11111111111223567889999999999999999999999999999887777544 33444
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccccCCcccccccccc
Q 013910 388 TAAILLLEALIVLSVVVILLIPFETKGKELVNTIDGV 424 (434)
Q Consensus 388 ~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~e~~~~~ 424 (434)
...++++++.++++.+..+++.||||+|+++|..+..
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 472 (479)
T PRK10077 436 GFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALW 472 (479)
T ss_pred ccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHH
Confidence 5667777888888888888888999999988875543
No 11
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=268.47 Aligned_cols=372 Identities=22% Similarity=0.287 Sum_probs=262.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhccc-------HHHHHHHHHHHHhcCCCchh-hhhhhhhccCCCcchhHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPN-------YISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVV 93 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~-------~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~ 93 (434)
.++-||+|||+++-..+++.+++++++++..+ ...+...|++.|+|+|+.+. .....+|.+..++||...+.
T Consensus 105 G~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaa 184 (538)
T KOG0252|consen 105 GWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAA 184 (538)
T ss_pred HHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEE
Confidence 47999999999999999999999998777532 46799999999999999865 45567899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHh-------cc--------cchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcC-ChHHHHH
Q 013910 94 FSTFWTFGSVSEAALAWIVM-------PI--------LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKG-RITDAHN 157 (434)
Q Consensus 94 ~~~~~~~G~~l~~~l~~~~~-------~~--------~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~-~~~~a~~ 157 (434)
......+|.+.|..++..+. +. .-||..|.++.+|+++..+.++.+|||++|..... +.++|.+
T Consensus 185 vFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~ 264 (538)
T KOG0252|consen 185 VFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAG 264 (538)
T ss_pred EEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhh
Confidence 88888888887777665531 11 13999999999999999999999999999974332 2222221
Q ss_pred HHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHH
Q 013910 158 ILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSF 237 (434)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 237 (434)
..+ ++.+ .+.+++.... ...+..++....+...+..++-++.+.....||...+
T Consensus 265 d~~-------k~~~---------~~~~~~~~~~----------~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDi 318 (538)
T KOG0252|consen 265 DMK-------KVLS---------VDIEAESTAE----------SDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDI 318 (538)
T ss_pred ccc-------cccc---------cccchhhccc----------cCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 100 0000 0000000000 0001111122233333433355667777788888888
Q ss_pred HHHHHHHHHHhhhcccCCCCcccccccCccc-hhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q 013910 238 VYYGIVLLASELSGSQSKCSSSILLSENVQD-ASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL 316 (434)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~ 316 (434)
.+|+..++.+.+........+.... ... .....+.++..+..+||..+...++|++||+...+.++++++++.+.+
T Consensus 319 afy~~nL~~s~I~~~ig~~~~~~~~---~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 319 AFYGQNLFQSVIFSAIGVIPSANTY---HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVI 395 (538)
T ss_pred hhhccccHHHHHHHhhccCCCcchH---HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHH
Confidence 9999888877776522221111000 000 112234556667788899999999999999999999999998887776
Q ss_pred Hhhhhh----HHHHH-HHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh-----hcc
Q 013910 317 VTLQSN----ILLTA-LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-----SCH 386 (434)
Q Consensus 317 ~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~-----~~g 386 (434)
....++ ....+ .....++...|+.....++++|.||+++|+++.|++.+.|++|++++.+.+.++.+ ..+
T Consensus 396 ~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g 475 (538)
T KOG0252|consen 396 AGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIG 475 (538)
T ss_pred cCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcccc
Confidence 643321 11222 22333445678888999999999999999999999999999999999999998887 556
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcccccCCccccccccc
Q 013910 387 QTAAILLLEALIVLSVVVILLIPFETKGKELVNTIDG 423 (434)
Q Consensus 387 ~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~e~~~~ 423 (434)
....+++++.+++++.++.+++ ||||+|+++|+.++
T Consensus 476 ~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e 511 (538)
T KOG0252|consen 476 VRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNE 511 (538)
T ss_pred chHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcCh
Confidence 6677888888888887777666 59999999987543
No 12
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=1.7e-29 Score=250.54 Aligned_cols=329 Identities=17% Similarity=0.171 Sum_probs=211.3
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWM 91 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~ 91 (434)
..++.||+|||+.+..+.++++++++++++++|+. .++++|+++|++.|+.. ....+..|+.|+++||+..
T Consensus 84 ~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 163 (438)
T PRK09952 84 FGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYS 163 (438)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHH
Confidence 35799999999999999999999999999999987 59999999999999874 4567889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHH
Q 013910 92 VVFSTFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIA 163 (434)
Q Consensus 92 ~~~~~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~ 163 (434)
+..+.++.+|.+++..+...+. ..++||++|.+.+++.++....+..+||||+|...+++.+++
T Consensus 164 ~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~-------- 235 (438)
T PRK09952 164 SGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA-------- 235 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc--------
Confidence 9999999999998877655443 257999999999888777666667789999875322110000
Q ss_pred HHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHH
Q 013910 164 QFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV 243 (434)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 243 (434)
++ +.+ ..+.+++ +++.........+...+.+|...
T Consensus 236 --------------------~~------~~~-----------------~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 270 (438)
T PRK09952 236 --------------------KK------RIP-----------------VIEALLR--HPGAFLKIIALRLCELLTMYIVT 270 (438)
T ss_pred --------------------cc------cCC-----------------HHHHHHH--chHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0000111 11112222223333344445444
Q ss_pred HHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh---hh
Q 013910 244 LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQ 320 (434)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~---~~ 320 (434)
.+.+.+..... +.+.........+.....+++..+.++++||+|||+.+..+.++..+..+.... ..
T Consensus 271 ~~~~~y~~~~~----------g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
T PRK09952 271 AFALNYSTQNL----------GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQ 340 (438)
T ss_pred HHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44333221100 011111111222334556778889999999999999887765554433322211 11
Q ss_pred hhHHH-HHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhh-HhHhhHHHHHHHHhhhcc-h-hhHHHHHHH
Q 013910 321 SNILL-TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR-IGGMVCPLVAVGLVTSCH-Q-TAAILLLEA 396 (434)
Q Consensus 321 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~-ig~~~~p~~~~~l~~~~g-~-~~~~~~~~~ 396 (434)
+.... ........+......+..+.+.+|++|++.|+++.|+.+..++ +++.++|.+.+.+.+..+ . ..++.+.++
T Consensus 341 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~ 420 (438)
T PRK09952 341 SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLA 420 (438)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 11111 1111111122223345678899999999999999999988876 789999999998887543 2 344555666
Q ss_pred HHHHHHHHHHhcccccC
Q 013910 397 LIVLSVVVILLIPFETK 413 (434)
Q Consensus 397 ~~~i~~~~~~~~~~et~ 413 (434)
+++++.+..+.. +||+
T Consensus 421 ~~~i~~v~~~~~-~~~~ 436 (438)
T PRK09952 421 GCLISAMTALLM-KDNQ 436 (438)
T ss_pred HHHHHHHHHHHc-cccc
Confidence 667776666554 5643
No 13
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=6.3e-30 Score=255.97 Aligned_cols=370 Identities=21% Similarity=0.291 Sum_probs=236.1
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~---~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
.+.||+|||+.+..+.+++.++.++..+. .++..++++|++.|+|.|... ....++.|++|+++|+++.++.+.+.
T Consensus 93 ~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 172 (481)
T TIGR00879 93 WLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAI 172 (481)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHH
Confidence 58899999999999999999998888554 345689999999999988764 45668899999999999999999999
Q ss_pred HHHHHHHHHHH---HHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCc
Q 013910 99 TFGSVSEAALA---WIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNL 175 (434)
Q Consensus 99 ~~G~~l~~~l~---~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 175 (434)
.+|..+++.++ ....+..+||+.|++.+++.++..+..+++||+|+++..+++.+++.+..++..+.+..+
T Consensus 173 ~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 246 (481)
T TIGR00879 173 TFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGED------ 246 (481)
T ss_pred HHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCc------
Confidence 99999999988 444567799999999877777776677789999999888888777666554432111000
Q ss_pred cCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 013910 176 TSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 255 (434)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
.+..+... .... ....++. ..+..+......+++...+........++.+.........+.+.+....
T Consensus 247 -----~~~~~~~~-~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 314 (481)
T TIGR00879 247 -----KELLDELE-LIDI---KRSIEKR-SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENA-- 314 (481)
T ss_pred -----HHHHHHHH-HHHH---HHHHHHh-hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHc--
Confidence 00000000 0000 0000000 0001111222221111112222222222222221122222222222111
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---hh-hh------hHHH
Q 013910 256 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL-QS------NILL 325 (434)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~~-~~------~~~~ 325 (434)
+.+............+..+++.+++++++||+|||+.+..+..+..+.+..+. .. .. ....
T Consensus 315 ---------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 315 ---------GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 01111122334455567788999999999999999988877665554433332 11 11 1111
Q ss_pred -HHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 013910 326 -TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 404 (434)
Q Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~ 404 (434)
.........+..+..+..+.+.+|.+|++.|+++.|+.+.+.+++++++|.+.+.+.+..+....+++++++++++++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 465 (481)
T TIGR00879 386 IVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIF 465 (481)
T ss_pred HHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHH
Confidence 1111111222223345567788999999999999999999999999999999998888766666777888888888888
Q ss_pred HHhcccccCCccccc
Q 013910 405 ILLIPFETKGKELVN 419 (434)
Q Consensus 405 ~~~~~~et~~~~~~e 419 (434)
.+++.||+|+++.+|
T Consensus 466 ~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 466 VYFFLPETKGRTLEE 480 (481)
T ss_pred HheecccCCCCChhh
Confidence 888889999887654
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1e-28 Score=244.66 Aligned_cols=324 Identities=19% Similarity=0.212 Sum_probs=204.0
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMV 92 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~ 92 (434)
.++.||+|||+++..+..++.++++++++++|+. .++++|+++|+|.|+.. ....++.|+.|+++||+..+
T Consensus 84 G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~ 163 (432)
T PRK10406 84 GRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYAS 163 (432)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHH
Confidence 3589999999999999999999999999999875 59999999999999864 55678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHH
Q 013910 93 VFSTFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQ 164 (434)
Q Consensus 93 ~~~~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~ 164 (434)
+.+.+...|.++++.+...+. +.+|||++|++.++++++....+..+||+|++..++
T Consensus 164 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~--------------- 228 (432)
T PRK10406 164 FQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA--------------- 228 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh---------------
Confidence 998888888888776544432 257999999999998888776777789988642100
Q ss_pred HcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 165 FNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVL 244 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (434)
. + +. .+++.+++ +++.........+.....+|+...
T Consensus 229 ---~---------------~------~~------------------~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
T PRK10406 229 ---L---------------K------EA------------------GSLKGLWR--NRRAFIMVLGFTAAGSLCFYTFTT 264 (432)
T ss_pred ---h---------------c------cc------------------ccHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 00111221 122222222223333455666665
Q ss_pred HHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH--hh--h
Q 013910 245 LASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV--TL--Q 320 (434)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~--~~--~ 320 (434)
|.+.+..... +.+.........+......++..+.++++||++||+.+..+..+..+...+.. .. .
T Consensus 265 ~lp~~l~~~~----------g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T PRK10406 265 YMQKYLVNTA----------GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVS 334 (432)
T ss_pred HHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5554432110 11111111122233344566677889999999999887765544333222111 11 1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhH-hHhhHHHHHHHHhhhcchh-hHHHHHHHHH
Q 013910 321 SNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQT-AAILLLEALI 398 (434)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~i-g~~~~p~~~~~l~~~~g~~-~~~~~~~~~~ 398 (434)
+......+............+..+.+.+|++|++.|+++.|++++++++ ++...|.+.+. .+.+|.+ ..+++.+++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~ 413 (432)
T PRK10406 335 SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMA 413 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHH
Confidence 1121111111111111122345677889999999999999999999886 34457877774 4544533 3444455666
Q ss_pred HHHHHHHHhcccccCCccc
Q 013910 399 VLSVVVILLIPFETKGKEL 417 (434)
Q Consensus 399 ~i~~~~~~~~~~et~~~~~ 417 (434)
+++.+..+++ ++++|+.
T Consensus 414 ~i~~~~~~~l--~~~~~~~ 430 (432)
T PRK10406 414 VVAFLVSLML--HRKGKGM 430 (432)
T ss_pred HHHHHHHHHh--hhccccc
Confidence 6666665553 5666654
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.96 E-value=2.7e-27 Score=228.64 Aligned_cols=313 Identities=17% Similarity=0.123 Sum_probs=202.6
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.++.||+|||+.+.........+.......+|+.+++++|+++|+|.|...+....++|++|+++|+++.++.+.+..+|
T Consensus 47 G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG 126 (368)
T TIGR00903 47 GLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLG 126 (368)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 57999999999776555444443332333479999999999999998864444555689999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 180 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 180 (434)
.++++.++..+.+..+||+.|.+.++++++. ++.++++||+|++.. +..+
T Consensus 127 ~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~---~~~~-------------------------- 177 (368)
T TIGR00903 127 IIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA---EGFG-------------------------- 177 (368)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCcc--------------------------
Confidence 9999999988888899999999977776665 445667999987420 0000
Q ss_pred CCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 013910 181 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 260 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (434)
.++. .++++++++++ ........++.....+|++..|.+.+..+..
T Consensus 178 -----------~~~~--------------~~~~~~ll~~~---~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g------ 223 (368)
T TIGR00903 178 -----------FKDA--------------VKEFGALAGRK---DLWIIGAILGFGVALFDNLAIWLEAALRPAG------ 223 (368)
T ss_pred -----------hHHH--------------HHHHHHHHcCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------
Confidence 0000 00112222222 1223444555666667777777776653211
Q ss_pred ccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchh---HHHHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 013910 261 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK---LSMTI-MFIFVCIFLLPLVTLQSNILLTALLSGARMFS 336 (434)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
.+ .. ......+..+.|.+..++++||..|| +.... ......+.+..+....+......+.....++.
T Consensus 224 -----~s-~~---~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 294 (368)
T TIGR00903 224 -----LE-DI---AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLM 294 (368)
T ss_pred -----CC-hH---HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhh
Confidence 01 11 11222333445556678888987654 33222 22222222222222222222222333333334
Q ss_pred hhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 337 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 337 ~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
...++..+.+.+|++|++.|+++.|+.++.++++++.+|.+.+.+.. +....+.++++..+++++.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~ 364 (368)
T TIGR00903 295 LPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALLL 364 (368)
T ss_pred hhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhC
Confidence 45556788899999999999999999999999999999998887663 44566777788888888777544
No 16
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=5.2e-26 Score=225.50 Aligned_cols=332 Identities=16% Similarity=0.210 Sum_probs=199.0
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKW 90 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~ 90 (434)
+.+.+.||+|||+.++.+..++.++++++++++|+. .++++|+++|++.|... ....+++|++|+++||+.
T Consensus 75 ~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~ 154 (434)
T PRK15075 75 VLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFY 154 (434)
T ss_pred HHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHH
Confidence 346799999999999999999999999999999987 47999999999998864 445688999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------hcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHH
Q 013910 91 MVVFSTFWTFGSVSEAALAWIV--------MPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKI 162 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~--------~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~ 162 (434)
.++.+.+..+|..+++.++..+ .+..+||++|++..++.++....+...||++++...+++
T Consensus 155 ~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~----------- 223 (434)
T PRK15075 155 TSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR----------- 223 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc-----------
Confidence 9999888888887777766554 246799999998765544333334445665432110000
Q ss_pred HHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHH
Q 013910 163 AQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGI 242 (434)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (434)
. +..+ .++.. .+.++.........+.+...++.+
T Consensus 224 ----------------------~-----~~~~-----------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
T PRK15075 224 ----------------------P-----SMRE-----------------IFRSL--AANWRIVLAGMLMVAMTTVSFYLI 257 (434)
T ss_pred ----------------------c-----cccc-----------------HHHHH--HHhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 00000 011122222222233334445555
Q ss_pred HHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH--Hh-h
Q 013910 243 VLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL--VT-L 319 (434)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~--~~-~ 319 (434)
..+.+.+..+.. +.+............+.++++..++++++||+|||+.+..+.....+..... .. .
T Consensus 258 ~~~~p~~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 327 (434)
T PRK15075 258 TVYTPTFGKTVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA 327 (434)
T ss_pred HHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 555544432110 1111112223345556778899999999999999998776544433222111 11 1
Q ss_pred hhhH-HHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhH-hHhhHHHHHHHHhhhcchhh-HHHHHHH
Q 013910 320 QSNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTA-AILLLEA 396 (434)
Q Consensus 320 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~i-g~~~~p~~~~~l~~~~g~~~-~~~~~~~ 396 (434)
.... ..........++.....+..+.+.+|.+|++.|+++.|+.+++++. ++.++|.+.+.+.+..+... ..+.+..
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~~~~~ 407 (434)
T PRK15075 328 APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGYWLSF 407 (434)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHHHHHH
Confidence 1111 1111111111111222344567789999999999999999888876 58889999998888766421 1211111
Q ss_pred HHHHHHHHHHhcccccCCccccc
Q 013910 397 LIVLSVVVILLIPFETKGKELVN 419 (434)
Q Consensus 397 ~~~i~~~~~~~~~~et~~~~~~e 419 (434)
+.++.+...++..+.++..++.
T Consensus 408 -~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK15075 408 -AAVCGLIATLVLYRRRGARLQA 429 (434)
T ss_pred -HHHHHHHHHHHhccccchhhhh
Confidence 2222233334445666666654
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=4.6e-26 Score=225.44 Aligned_cols=336 Identities=19% Similarity=0.213 Sum_probs=209.5
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+.+.||+|||+.+..+.+++.++.++.++++++..++++|+++|+|.|... ....++.|+.|+|+|++..++.+.+..+
T Consensus 74 g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 153 (426)
T PRK12307 74 GLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI 153 (426)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH
Confidence 468999999999999999999999999999999999999999999988754 4566788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 180 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 180 (434)
|.++++.+...+.+..+||+.|++..++.++........||++++...+.+ .+ +
T Consensus 154 g~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~---------------~~----~------- 207 (426)
T PRK12307 154 GNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLS---------------GK----G------- 207 (426)
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh---------------cc----c-------
Confidence 999998887777777899999998766655544445557888765321100 00 0
Q ss_pred CCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 013910 181 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 260 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (434)
++ + +. . .+ . .....+..++.+..+.........+......+.+..+.+.+....
T Consensus 208 ---~~--~--~~-~-----~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 261 (426)
T PRK12307 208 ---KH--S--QS-A-----WS---V---FSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE------- 261 (426)
T ss_pred ---cc--c--cc-c-----hh---h---hhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 00 0 00 0 00 0 000122333333222222222222211111122222222222111
Q ss_pred ccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-hhHHHH-HHHHHHHHHHhh
Q 013910 261 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLT-ALLSGARMFSMG 338 (434)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~ 338 (434)
+.+............++++++.++.+++.||++||+.+..+.+++.+....+.... ...... ...+.......+
T Consensus 262 ----g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (426)
T PRK12307 262 ----GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVG 337 (426)
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhccc
Confidence 01111111222344567888999999999999999988877666554443332211 111111 112121112223
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhh-HHHHHHHHHHHHHHHHHhcccccC
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~-~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
..+..+.+..|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+... .++..+..+.++.+...+..||+.
T Consensus 338 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (426)
T PRK12307 338 VGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDRL 413 (426)
T ss_pred HhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChhh
Confidence 344566778899999999999999999999999999999998888766432 233444444444444444445543
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=1.8e-25 Score=219.84 Aligned_cols=323 Identities=23% Similarity=0.302 Sum_probs=209.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+.||+|||+.+..+..+..++.++..+++|+..+++.|++.|++.+... ....++.|+.|+++||+..++.+.+..+
T Consensus 71 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 150 (406)
T PRK11551 71 GRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPF 150 (406)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999889999999999999999999987754 4556789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|..+++.++..+.+..+||+.|++.++..++.. ....++||+|++...+++.++.+
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------------------- 207 (406)
T PRK11551 151 GGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRA----------------------- 207 (406)
T ss_pred HHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhh-----------------------
Confidence 999999888777777899999998877655544 34566899987532111000000
Q ss_pred CCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSS 259 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (434)
. .....++++..+.....+..++.....++....+.+.+..+.+
T Consensus 208 --------------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g----- 251 (406)
T PRK11551 208 --------------P-----------------VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQG----- 251 (406)
T ss_pred --------------h-----------------hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 0 0000011111111112222223333333444334443332111
Q ss_pred cccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhh
Q 013910 260 ILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT 339 (434)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (434)
.+............+.++++.++.++++||+|||+.+..+.+...+.+..+....+.+..........++..+.
T Consensus 252 ------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (406)
T PRK11551 252 ------LSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGG 325 (406)
T ss_pred ------CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhH
Confidence 11111122333445678899999999999999999887755544444333332222222212222222223344
Q ss_pred hhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhh-HHHHHHHHHHHHHHHHHhcc
Q 013910 340 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTA-AILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 340 ~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~-~~~~~~~~~~i~~~~~~~~~ 409 (434)
.+..+.+.+|.+|++.|+++.|+.+.++++++.++|.+.+.+.+..+... .+...+.+.+++.+..+.+.
T Consensus 326 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 326 QSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 56677889999999999999999999999999999999998887644332 33344444445545544443
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.95 E-value=1.8e-25 Score=219.98 Aligned_cols=325 Identities=17% Similarity=0.202 Sum_probs=198.8
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+.||+|||+.+..+.+++.++++++++++|+.++++.|+++|++.|... ....++.|++|+++||+..++++.+..+|
T Consensus 65 ~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 144 (412)
T TIGR02332 65 IMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVT 144 (412)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999998764 44567899999999999999999999999
Q ss_pred HHHHHHHHHHHhc------ccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCC
Q 013910 102 SVSEAALAWIVMP------ILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 174 (434)
Q Consensus 102 ~~l~~~l~~~~~~------~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 174 (434)
.++++.++..+.+ ..+||+.|.+.++++++..+ .++++||+|+.. +.-.+++++..++..+.+..+
T Consensus 145 ~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~----- 217 (412)
T TIGR02332 145 MALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQLT----- 217 (412)
T ss_pred HHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhcccc-----
Confidence 9999998876642 46999999999888776544 456789999521 100111111111111100000
Q ss_pred ccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 013910 175 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQS 254 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
.++...+.++.. ......++.++++.. ......++.....++++..+.+.+..+..
T Consensus 218 --------~~~~~~~~~~~~------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 273 (412)
T TIGR02332 218 --------LEQPEGAFAHAA------------MPQRSMLREIFTPAI----MLYTLAYFCLTNTLSAINIWTPQILQSFN 273 (412)
T ss_pred --------cccccccccccc------------ccHHHHHHHhcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 000000000000 000011222333332 22233334444455555555555443210
Q ss_pred CCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHH-HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 013910 255 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM-TIMFIFVCIFLLPLVTLQSNILLTALLSGAR 333 (434)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
. +.+............++.++|.+++++++||++||+.. ........+.+.......+............
T Consensus 274 ~---------~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (412)
T TIGR02332 274 Q---------GSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMAS 344 (412)
T ss_pred C---------CCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 0 00111112233455677888999999999999977643 3322222222221111111111111111111
Q ss_pred HHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch
Q 013910 334 MFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ 387 (434)
Q Consensus 334 ~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~ 387 (434)
+......+..+....|.+|++.|+++.|+.++.+++|++++|.+.+.+.+..|.
T Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~ 398 (412)
T TIGR02332 345 MGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGS 398 (412)
T ss_pred HHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCC
Confidence 111122234556678999999999999999999999999999999988887653
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.95 E-value=3.4e-25 Score=217.24 Aligned_cols=322 Identities=19% Similarity=0.267 Sum_probs=201.5
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
.++.||+|||+.+..+.++..+++++.++++++..+++.|++.|++.+... ....++.|++|+++|++..++.+.+..+
T Consensus 68 G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 147 (405)
T TIGR00891 68 GLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAV 147 (405)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHH
Confidence 469999999999999999999999999999999999999999999988764 4566789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 101 GSVSEAALAWIVMPILT--WRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~--Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
|..+++.++..+.+..+ ||+.|.+.+++.++..+....+||+|++...+++.++..+..++..+.
T Consensus 148 g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 214 (405)
T TIGR00891 148 GAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGG------------- 214 (405)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhcc-------------
Confidence 99999998877766555 999999988877776666777899987653322221111111111000
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
++..++ . .++ ....... ..++.+.................++...+.+.+....
T Consensus 215 -----~~~~~~-~--------~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 268 (405)
T TIGR00891 215 -----EHRIAN-I--------VMT------LAAAMVQ-SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD----- 268 (405)
T ss_pred -----chhhhh-h--------hhh------hhHHhhh-hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-----
Confidence 000000 0 000 0000000 0011111111111111111111112211111111100
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHHHh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLTALLSGARMFSM 337 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 337 (434)
.+.+............+++++|.++.+++.||+|||+.+..+...+.+........ .+.+..........++..
T Consensus 269 -----~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 269 -----LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQ 343 (405)
T ss_pred -----hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 01111111222344567788999999999999999998887766553333222221 222221111122222333
Q ss_pred hhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch
Q 013910 338 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ 387 (434)
Q Consensus 338 ~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~ 387 (434)
+..+..+.+.+|.+|++.|+++.|+.+.++++++.++|.+.+.+.|..|.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 344 GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE 393 (405)
T ss_pred cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44556677889999999999999999999999999999999999887763
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=1.2e-24 Score=215.77 Aligned_cols=344 Identities=15% Similarity=0.132 Sum_probs=211.1
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
.++.||+|||+.+.++.+++.++.++.++++|+..+++.|++.|++.|... ....++.|++|+++||+..++++.+..+
T Consensus 79 G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~ 158 (434)
T PRK11663 79 GIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV 158 (434)
T ss_pred hHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999887654 4556789999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|..+++.+...+.+..+||+.|.+.++..++. ++..+++||+|++...+...++
T Consensus 159 g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~------------------------- 213 (434)
T PRK11663 159 GGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEW------------------------- 213 (434)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccc-------------------------
Confidence 99999998888888889999999988776655 3445568998864311000000
Q ss_pred CCCCcccccCCCCccccccccccccccccccch-hh-hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSS-FL-MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 257 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
+++.++.+++. +++ +.+.+. ++ ..++.+ .........+.....++++..+.+.+.....
T Consensus 214 ----~~~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--- 274 (434)
T PRK11663 214 ----RHDALELAQQQ-----EGA----GLSRKEILTKYVLLNP---YIWLLSFSYVLVYVVRAAINDWGNLYMSETL--- 274 (434)
T ss_pred ----cccccccchhc-----ccc----CCChhhhHHHHHhcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 00000000000 000 000000 00 011111 1111222222233333444444433321110
Q ss_pred cccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhh--chh-HHHHHHHHHH--HHHHHHHHhhhhhHHHHHHHHHH
Q 013910 258 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRK-LSMTIMFIFV--CIFLLPLVTLQSNILLTALLSGA 332 (434)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--gRR-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
+.+............+++++|.+++++++||+ ++| .......... ....+......+........+..
T Consensus 275 -------g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (434)
T PRK11663 275 -------GVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTI 347 (434)
T ss_pred -------CCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 11111111223344567889999999999998 333 3222211111 11111111111111111111111
Q ss_pred HHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 333 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 333 ~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
.++..++........+|.+|++.|+++.|+.++++++|+.++|.+.+.+.|..|....+++.+++++++++..+...++.
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 348 GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11222333344566789999999999999999999999999999999998877766777788888888877777666666
Q ss_pred CCcc
Q 013910 413 KGKE 416 (434)
Q Consensus 413 ~~~~ 416 (434)
++++
T Consensus 428 ~~~~ 431 (434)
T PRK11663 428 APRE 431 (434)
T ss_pred chhc
Confidence 6554
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=2.4e-24 Score=210.50 Aligned_cols=324 Identities=27% Similarity=0.355 Sum_probs=209.1
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+.+.||+|||+.+..+.++..++.++..+++++..+++.|++.|++.+... ....++.|+.|+++|++..++.+.+..
T Consensus 72 ~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 151 (398)
T TIGR00895 72 FGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYP 151 (398)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHH
Confidence 3468999999999999999999999999999999999999999999988754 556788999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHH-HHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFV-LLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l-~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
+|..+++.++..+.+..+||+.|.+.++..++ ..+...++||+|++...+ +.+++.+..++....+..+.
T Consensus 152 ~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------- 222 (398)
T TIGR00895 152 IGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEA-------- 222 (398)
T ss_pred HHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccc--------
Confidence 99999999988888888999999988654444 445566789999887655 44555555554432221100
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
+.+.++ ++. +....+ .....+++++..+.....+...+.....++....+.+.+....
T Consensus 223 -~~~~~~-----~~~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 280 (398)
T TIGR00895 223 -QSALPE-----QKA--------TQGTKR---SVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVEL----- 280 (398)
T ss_pred -cccccc-----ccc--------ccchhh---HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 000000 000 000000 0122233344444444444444444444444444444322111
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMG 338 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
+.+............+..+++.+++++++||+|||..............+......+............++..+
T Consensus 281 ------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (398)
T TIGR00895 281 ------GFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNG 354 (398)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 11111112233455677889999999999999999544433322222222222122222222222222233334
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHH
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 381 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l 381 (434)
..+..+.+.+|.+|++.|+++.|+.++++++++.++|.+.+.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 355 GQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 5567788999999999999999999999999999999988754
No 23
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.94 E-value=1.1e-24 Score=212.32 Aligned_cols=338 Identities=16% Similarity=0.187 Sum_probs=204.5
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+.+.||+|||+.+..+.++..++.++.++++|+..++++|++.|++.+... ....++.|++|+++|++..++.+....
T Consensus 49 ~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 128 (399)
T TIGR00893 49 GGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQG 128 (399)
T ss_pred HHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhch
Confidence 3468999999999999999999999999999999999999999999987654 456788999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
+|.++++.++..+.+..+||+.|.+.++..++..+. .+..||+|+- +.+.++.++.... +..
T Consensus 129 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~------------ 191 (399)
T TIGR00893 129 LGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQK---AKWLTEEEKYIVV--GGL------------ 191 (399)
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCc---cccCCHHHHhhcc--hhh------------
Confidence 999999999888888889999999988877766444 4456777642 1111111110000 000
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 257 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
+.+.++.++. +......+..++ ++.+ ......+.....++....+.+.+.....
T Consensus 192 -----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 246 (399)
T TIGR00893 192 -----LAEQQGKGPS-------------TPKKYQIKELLKDRRVW----GLALGQFLVNIGLGFFLTWFPTYLVQER--- 246 (399)
T ss_pred -----cccccccccc-------------CCCccchHHHhcCHHHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHh---
Confidence 0000000000 000011122222 2222 1122222222222222222222211100
Q ss_pred cccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhH--HHHHH--HHHHHHHHH--HHHhh-hhhHHHHHHHH
Q 013910 258 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL--SMTIM--FIFVCIFLL--PLVTL-QSNILLTALLS 330 (434)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~--~~~~~--~~~~~~~~~--~~~~~-~~~~~~~~~~~ 330 (434)
+.+............+.++++.+++++++||++||+ ..... .....+... ..... .+.........
T Consensus 247 -------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (399)
T TIGR00893 247 -------GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALV 319 (399)
T ss_pred -------cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 011111122233445677889999999999999996 11111 111111111 11111 11111111111
Q ss_pred HHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHh
Q 013910 331 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g-~~~~~~~~~~~~~i~~~~~~~ 407 (434)
....+..+..+..+.+.+|.+|++.|+++.|+.+.+.++++.++|.+.+.+.+..+ ....+.+.+++++++.+..++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 320 ALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 11122233467788899999999999999999999999999999999999888766 445566666666666555543
No 24
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.2e-25 Score=209.38 Aligned_cols=340 Identities=18% Similarity=0.283 Sum_probs=230.9
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
|+-..++||.+.|..+-+++++..+.+++.+++++...+.++-+++|...|.+ +.....++-|+|+++||++.++.+.+
T Consensus 82 f~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~s 161 (448)
T COG2271 82 FVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTS 161 (448)
T ss_pred HHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhh
Confidence 55678999999999999999999999999999999999999999999998886 45666788999999999999999999
Q ss_pred HHHHHHHHHHHH--HHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCC
Q 013910 98 WTFGSVSEAALA--WIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 174 (434)
Q Consensus 98 ~~~G~~l~~~l~--~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 174 (434)
+++|..+.+++. ..+..+.+||..|++.++.+++..+ ..+.+.|+|+= .|-.. ++ +..+
T Consensus 162 hNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs---~GLP~-----ie---~~~~------- 223 (448)
T COG2271 162 HNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS---EGLPP-----IE---EYRG------- 223 (448)
T ss_pred hhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCC-----HH---Hhhc-------
Confidence 999999999888 6667777999999999998888755 45668898872 11110 00 0000
Q ss_pred ccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHH---HHHHHHHHhhhc
Q 013910 175 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVY---YGIVLLASELSG 251 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~ 251 (434)
+..+.+ +++++.+ ....++ .-.+..++.+ .+|.+.+.+.+.| |++..|.|.+..
T Consensus 224 ------d~~e~~-~~~~~~~--------~ls~~~--i~~~YVL~Nk------~iW~la~a~vfvYivR~gi~dW~p~YL~ 280 (448)
T COG2271 224 ------DPLEIY-EEEKENE--------GLTAWQ--IFVKYVLKNK------LIWLLALANVFVYVVRYGINDWGPLYLS 280 (448)
T ss_pred ------Cchhhh-hhhccCC--------CccHHH--HHHHHHHcCh------HHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 000000 0000000 000000 0111122222 2455555555544 788878776654
Q ss_pred ccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhh--chhHHHHHHHHHH-HHHHHHHHhhhh--hHHHH
Q 013910 252 SQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTIMFIFV-CIFLLPLVTLQS--NILLT 326 (434)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--gRR~~~~~~~~~~-~~~~~~~~~~~~--~~~~~ 326 (434)
+... .+..+......+.-+++++|++++|+++||+ |||....+.+.+. .+++.......+ .....
T Consensus 281 e~k~----------~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~ 350 (448)
T COG2271 281 EVKG----------FSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDA 350 (448)
T ss_pred HhcC----------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHH
Confidence 3221 1112223334455688999999999999997 7887665443333 333333333221 23333
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhH-hHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 013910 327 ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 405 (434)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~i-g~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 405 (434)
.+++...++..|+--+......|..|.+..++|.|+...++++ |+..+....+++.|..|....++++.+.++++.+..
T Consensus 351 ~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 351 ILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHH
Confidence 3334444556677777788899999999999999999999999 888888888888787676677777666666666555
Q ss_pred Hhcc
Q 013910 406 LLIP 409 (434)
Q Consensus 406 ~~~~ 409 (434)
+...
T Consensus 431 ~~~~ 434 (448)
T COG2271 431 LPVW 434 (448)
T ss_pred HHHH
Confidence 5443
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.94 E-value=1e-24 Score=218.21 Aligned_cols=342 Identities=14% Similarity=0.136 Sum_probs=202.9
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFS 95 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~-----~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~ 95 (434)
..+.||+|||+.+..+.+++++++++.++ ++|+..+++.|+++|++.|.. +....++.|++|+++||++.++++
T Consensus 85 G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~ 164 (467)
T PRK09556 85 GYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWN 164 (467)
T ss_pred hhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeee
Confidence 36899999999999888888877766554 689999999999999988775 345568899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---cchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCC
Q 013910 96 TFWTFGSVSEAALAWIVMPI---LTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 171 (434)
Q Consensus 96 ~~~~~G~~l~~~l~~~~~~~---~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 171 (434)
.+..+|.++++.++...... .+||..|.+.++.+++..+. +++.+|+|+.. +..++ ++.. ++
T Consensus 165 ~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~~------~~---- 230 (467)
T PRK09556 165 ISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEIF------GE---- 230 (467)
T ss_pred cccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhcc------cC----
Confidence 99999999998887554432 26999999888777766444 44567777521 11000 0000 00
Q ss_pred CCCccCCCCCCCcccccCCCCccccccccccccccccccchh-h-hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013910 172 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSF-L-MLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASEL 249 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 249 (434)
. .+++.++.+++ + ......+ . .+.++.. .......+.....+++...|.+.+
T Consensus 231 -~---------~~~~~~~~~~~--------~----~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~p~y 284 (467)
T PRK09556 231 -P---------ISEEDKETEST--------D----MTKWQIFVEYVLKNPVI----WLLCFANIFLYIVRIGIDNWSPVY 284 (467)
T ss_pred -c---------cchhhhccccc--------c----CcHHHHHHHHHHcChHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000000 0 0000000 0 1111222 122233333344445555555543
Q ss_pred hcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHH--HHHHhhhhhHHHHH
Q 013910 250 SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL--LPLVTLQSNILLTA 327 (434)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 327 (434)
..+. .+.+............++.++|.+++|+++||+|||+..........+.. +......+......
T Consensus 285 l~~~----------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (467)
T PRK09556 285 AFQE----------LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLA 354 (467)
T ss_pred HHHc----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3211 01111112223344556788999999999999999887655433322221 11111112211111
Q ss_pred HHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhH-hHhhHHHHHHHHhh------------hcchhhHHHHH
Q 013910 328 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVT------------SCHQTAAILLL 394 (434)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~i-g~~~~p~~~~~l~~------------~~g~~~~~~~~ 394 (434)
..+...++..++....+....|.+|++.|+++.|+.+.++++ |++++|.+.+.+.| ..+....+.++
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 111111122233333345667999999999999999999997 66899999999988 34445566666
Q ss_pred HHHHHHHHHHHHhcc-cccC
Q 013910 395 EALIVLSVVVILLIP-FETK 413 (434)
Q Consensus 395 ~~~~~i~~~~~~~~~-~et~ 413 (434)
+++++++.+..+++. .|+|
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~ 454 (467)
T PRK09556 435 DIAAIGCICLMAIVAVMEER 454 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 677777666655543 3444
No 26
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=9.2e-24 Score=208.43 Aligned_cols=339 Identities=16% Similarity=0.059 Sum_probs=215.0
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHh-----hcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSA-----FSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVF 94 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~-----~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~ 94 (434)
.+.+.||+|||+.+..+..+..++.+..+ ..+++..+++.|++.|++.+... ....++.|+.|+++|++..++.
T Consensus 72 ~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (417)
T PRK10489 72 GGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAIT 151 (417)
T ss_pred hHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHH
Confidence 34689999999999888777766554433 25788999999999999866543 3455678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCC
Q 013910 95 STFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 174 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 174 (434)
+....+|..+++.++..+.+..+||+.|.+.++..++..+..+.+||+|+.. +++
T Consensus 152 ~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~----------------------- 206 (417)
T PRK10489 152 MLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPP--QPR----------------------- 206 (417)
T ss_pred HHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccc-----------------------
Confidence 9999999999999988877777999999988877776666666777754310 000
Q ss_pred ccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 013910 175 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQS 254 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
++ +.++ ..+.++..++.+..+...+...... . ..+...+.+.+..+.
T Consensus 207 ---------~~-----~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~p~~~~~~- 253 (417)
T PRK10489 207 ---------EH-----PLRS--------------LLAGFRFLLASPVVGGIALLGGLLT---M-ASAVRVLYPALADEV- 253 (417)
T ss_pred ---------cc-----chHH--------------HHHHHHHHHcChHHHHHHHHHHHHH---H-HHhHHHhhHHHHHhc-
Confidence 00 0000 0001112222222222222111111 1 112222222222110
Q ss_pred CCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 013910 255 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARM 334 (434)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
.+.+............++.++|.++.+++.||.++|+.+..+..+.++..+.+....+............+
T Consensus 254 ---------~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (417)
T PRK10489 254 ---------WQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGY 324 (417)
T ss_pred ---------cCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 00111111112234456678888999999999777777666655554444333322222211111111111
Q ss_pred HHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 335 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 335 ~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
......+..+.+..|..|++.|+++.|+.+....+|+.++|.+.+.+.+..+....+...+++..+..++.+...||+|+
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 325 LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 11112244567888999999999999999999999999999999999887776667777777777777777777789999
Q ss_pred cccccccccccC
Q 013910 415 KELVNTIDGVSN 426 (434)
Q Consensus 415 ~~~~e~~~~~~~ 426 (434)
++.+|+++|.+.
T Consensus 405 ~~~~~~~~~~~~ 416 (417)
T PRK10489 405 FRQTPPEVDASD 416 (417)
T ss_pred cccccccCCCCC
Confidence 999999888764
No 27
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=7e-23 Score=200.34 Aligned_cols=312 Identities=16% Similarity=0.125 Sum_probs=197.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+.+.||+|||+.+..+..+..++++.+++++|+..++++|+++|++.+... ....++.|++|+++|+++.++.+.+..+
T Consensus 65 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~ 144 (390)
T PRK03545 65 MLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTAL 144 (390)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999887653 4556788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|..+++.++..+.+..+||+.|++.++.+++..+. ...+||.|+ +.+ +..
T Consensus 145 g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~----~~~--~~~----------------------- 195 (390)
T PRK03545 145 AMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS----EHS--GSL----------------------- 195 (390)
T ss_pred HHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC----CCc--chH-----------------------
Confidence 99999999888878889999999998877665443 444666542 000 000
Q ss_pred CCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcccCCCC
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLL-ASELSGSQSKCS 257 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (434)
++....++ ++.+......... ...+++...+ .+.+....
T Consensus 196 -------------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~---- 236 (390)
T PRK03545 196 -------------------------------KSLPLLFRRPALVSLYLLTVVV----VTAHFTAYSYIEPFVQQVA---- 236 (390)
T ss_pred -------------------------------HHHHHHHhCcHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhc----
Confidence 00011111 2222111111111 1111111111 11111100
Q ss_pred cccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 013910 258 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSM 337 (434)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
+.+............+.+++|.++.+++.||.+||.......+.............+............+...
T Consensus 237 -------g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~ 309 (390)
T PRK03545 237 -------GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIM 309 (390)
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 0111111222334456788999999999999998875444333222222221222222221111111111112
Q ss_pred hhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 338 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 338 ~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
+..........|..| +.|+++.|+.+...++|..++|.+.+.+.+..+....+...+.+.+++.+..++..
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 222334455567777 57899999999999999999999999999887777777777777777776666554
No 28
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=3.2e-23 Score=202.18 Aligned_cols=302 Identities=19% Similarity=0.241 Sum_probs=189.8
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHH--------HHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYI--------SLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKW 90 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~--------~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~ 90 (434)
+..++.||+|||+.+..+.++..++.++.++++++. .++++|+++|++.+... ....++.|+.|+++|++.
T Consensus 54 ~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 133 (394)
T TIGR00883 54 VFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFY 133 (394)
T ss_pred HhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHH
Confidence 345789999999999999999999999999999875 48999999999988754 456688999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHH
Q 013910 91 MVVFSTFWTFGSVSEAALAWIVM--------PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKI 162 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~~--------~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~ 162 (434)
.+..+.+..+|.++++.++..+. +..+||+.|.+.++..++.......+||+|++...+++.
T Consensus 134 ~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 203 (394)
T TIGR00883 134 GSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH---------- 203 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc----------
Confidence 99999999999999988765442 356899999988877776666666788887642110000
Q ss_pred HHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHH
Q 013910 163 AQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGI 242 (434)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (434)
++ ++. +....++.+ ++.........+.....++..
T Consensus 204 ---------------------~~-----~~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (394)
T TIGR00883 204 ---------------------KK-----KRG------------------PIRETLTKH-RKPFLLGLGLVIATTTTFYLI 238 (394)
T ss_pred ---------------------cc-----ccC------------------CHHHHHHhc-hHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 000111111 111222222222233333333
Q ss_pred HHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHH-HH-HHhh-
Q 013910 243 VLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFL-LP-LVTL- 319 (434)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~-~~-~~~~- 319 (434)
..+.+.+.... .+.+............+.+.++..++++++||+|||+.+..+..+..+.. .. ....
T Consensus 239 ~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T TIGR00883 239 TTYLPTYLTQT----------LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD 308 (394)
T ss_pred HHHHHHHHHHh----------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333222110 00111112223344556778888999999999999997765444333222 11 1111
Q ss_pred hhh-HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhh-hHhHhhHHHHHHHHhhhcc
Q 013910 320 QSN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 320 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~-~ig~~~~p~~~~~l~~~~g 386 (434)
..+ +..........++.....+..+.+.+|.+|++.|+++.|+.+..+ .+++.++|.+.+.+.+..+
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 111 221111111112222345667888999999999999999976665 4678899999998888766
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.93 E-value=3.1e-23 Score=209.38 Aligned_cols=365 Identities=18% Similarity=0.240 Sum_probs=209.1
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
+..++.||+|||+.+..+.++..++.++.++++|+..+++.|++.|++.+... ....++.|.+|+++|++..++...+.
T Consensus 74 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 153 (496)
T PRK03893 74 LLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGF 153 (496)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 44579999999999999999999999999999999999999999999987754 45667889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 99 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
.+|..+++.+...+.+..+||+.|.+..++.++.+.....+||++++...+++.++..+..+...+.+.
T Consensus 154 ~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 222 (496)
T PRK03893 154 SIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEH----------- 222 (496)
T ss_pred HHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchh-----------
Confidence 999999999988888889999999987776666555566789988764322211111111100000000
Q ss_pred CCCCCcccccCCCCccccccccccccccccccc-------------hhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFS-------------SFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLL 245 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (434)
+.................... ..+..+. .+.....++.+..........+......++...+
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (496)
T PRK03893 223 ---RIINILLTLAAAAALWFCFAG--NLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQAL 297 (496)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHh--hhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHH
Confidence 000000000000000000000 0000000 0000000000000001111111111111112222
Q ss_pred HHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh-hhh-H
Q 013910 246 ASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSN-I 323 (434)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~-~~~-~ 323 (434)
.+.+.... .+.+............++.++|.+++++++||+|||+.+..+..+..+..+.+... ... +
T Consensus 298 lp~~l~~~----------~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (496)
T PRK03893 298 LPTYLKTD----------LGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVW 367 (496)
T ss_pred HHHHHHhh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 22222100 01111122223344567788899999999999999998877665555443322221 111 1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHH-HHHH
Q 013910 324 LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALI-VLSV 402 (434)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~-~i~~ 402 (434)
......+....+..+.......+.+|.+|++.|++++|+.++.+.+|+.++|.+.+.+.+..+....+...+.++ +++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~ 447 (496)
T PRK03893 368 VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVI 447 (496)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 111111111122223344566778899999999999999999999999999999998888776554444444333 3333
Q ss_pred HHHHhccc
Q 013910 403 VVILLIPF 410 (434)
Q Consensus 403 ~~~~~~~~ 410 (434)
+...+..|
T Consensus 448 ~~~~~~~~ 455 (496)
T PRK03893 448 LLIGLDMP 455 (496)
T ss_pred HHHHhcCc
Confidence 33434333
No 30
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=7.1e-23 Score=200.35 Aligned_cols=322 Identities=16% Similarity=0.092 Sum_probs=206.8
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
..+.+.||+|||+++..+..++.++.+++++++|+..++++|+++|+|.+... ....++.|+.| ++|+++.+.+..+.
T Consensus 63 ~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 141 (393)
T PRK09705 63 AGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAAL 141 (393)
T ss_pred hhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHH
Confidence 34579999999999999999999999999999999999999999999988754 33456778886 88999999999999
Q ss_pred HHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHHhcC-CChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCcc
Q 013910 99 TFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMP-ESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 176 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~-~Wr~~f~~~~i~~~l~~~~~~~lp-ESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 176 (434)
.+|..+++.++..+.++. +||+.+.+.+++.++..+.++... +.|+ +
T Consensus 142 ~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~--- 190 (393)
T PRK09705 142 MGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA----------------------------S--- 190 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc----------------------------c---
Confidence 999999998887766654 899988776666554433322211 1000 0
Q ss_pred CCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 177 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
++ .++.. ....+.+++.+ .....++.....+++...+.+.+..+.
T Consensus 191 -------~~----~~~~~-----------------~~~~l~~~~~~----~l~~~~~~~~~~~~~~~~~lp~~l~~~--- 235 (393)
T PRK09705 191 -------SH----KTTTT-----------------PVRVVFTPRAW----TLGVYFGLINGGYASLIAWLPAFYIEI--- 235 (393)
T ss_pred -------cc----CCCcC-----------------CcccccCHhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 00 00000 00011112211 111222223334444444444333211
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMF 335 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 335 (434)
+.+.........+..+.+++|.++.+++.||.+||+....+..+..+....+.. ..+...... ....+.
T Consensus 236 --------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~l~g~g 305 (393)
T PRK09705 236 --------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWA--MVCGLG 305 (393)
T ss_pred --------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHHH--HHHHHh
Confidence 011111112234556778899999999999999998887776555444333221 111111111 111111
Q ss_pred Hhhhhhhhhhhccccc-CCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 336 SMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 336 ~~~~~~~~~~~~~El~-P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~-~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
..+.++.......+.+ |++.|+++.|+.+.++++++.++|.+.+.+.|..|. ...+.+.++++++..+..+.++|||+
T Consensus 306 ~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 306 LGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred ccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 2223344444545666 467899999999999999999999999999998764 34556666777777788888999999
Q ss_pred Ccccc
Q 013910 414 GKELV 418 (434)
Q Consensus 414 ~~~~~ 418 (434)
.|...
T Consensus 386 ~~~~~ 390 (393)
T PRK09705 386 PQLWV 390 (393)
T ss_pred cchhc
Confidence 87654
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.92 E-value=2.8e-22 Score=196.72 Aligned_cols=320 Identities=15% Similarity=0.051 Sum_probs=198.0
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc--------ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFS--------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKW 90 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~--------~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~ 90 (434)
+.+.+.||+|||+++..+.+++.++++...++ .++..+++.|+++|++.+... ....++.|+.|+++|+++
T Consensus 70 ~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 149 (399)
T PRK05122 70 HAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRV 149 (399)
T ss_pred hhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccc
Confidence 34479999999999999999888776655443 256789999999999988754 445678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCC
Q 013910 91 MVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSL 170 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~ 170 (434)
.++.+.+..+|.++++.++..+.+..+||+.+.+..+..++........||++. +
T Consensus 150 ~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------------------- 204 (399)
T PRK05122 150 ISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP----V--------------------- 204 (399)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC----C---------------------
Confidence 999999999999999999888888889999988776655443333322232211 0
Q ss_pred CCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013910 171 PSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELS 250 (434)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 250 (434)
++ ++. +....++ +.++..... ....+.++....+.+.+.
T Consensus 205 -------------~~-----~~~------------------~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 243 (399)
T PRK05122 205 -------------KG-----ERL------------------PFRRVLG-RVWPYGMGL----ALASIGFGTIATFITLYY 243 (399)
T ss_pred -------------Cc-----cch------------------hHHHHHH-HHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 00 000 0000000 001110000 011111222211211111
Q ss_pred cccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 013910 251 GSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLS 330 (434)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
.+.+ ..... .......++.+++.++.+++.||.+||+.+..+..+..+....+....+.+.......
T Consensus 244 ~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T PRK05122 244 AARG-----------WDGAA--LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAA 310 (399)
T ss_pred HHcc-----------cccch--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 1100 00011 1122334566788899999999999999887766655554443333222222211111
Q ss_pred HHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 013910 331 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 410 (434)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 410 (434)
...++....++.......|.+|++.|+++.|+.+....+|+.++|.+.+.+.+..|....+.+.+++++++.+..+++ +
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~ 389 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL-Y 389 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 111112223344445667899999999999999999999998888888888887776667777777777776666665 4
Q ss_pred ccCCccccc
Q 013910 411 ETKGKELVN 419 (434)
Q Consensus 411 et~~~~~~e 419 (434)
+.++|+.+|
T Consensus 390 ~~~~~~~~~ 398 (399)
T PRK05122 390 RRAPRAVPE 398 (399)
T ss_pred ccccccCCC
Confidence 666666655
No 32
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=2.3e-22 Score=200.44 Aligned_cols=344 Identities=16% Similarity=0.197 Sum_probs=195.2
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhc----ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFST 96 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~----~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~ 96 (434)
+.+.||+|||+.+..+.++++++.++.+++ .++..+++.|++.|++.|... .....+.|++|+++||+..++++.
T Consensus 84 G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 163 (452)
T PRK11273 84 GSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNC 163 (452)
T ss_pred hhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHH
Confidence 468999999999999999999988888765 378889999999999887654 344567899999999999999999
Q ss_pred HHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCC
Q 013910 97 FWTFGSV-SEAALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 174 (434)
Q Consensus 97 ~~~~G~~-l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 174 (434)
+..+|.. .++++...+....+||+.|++.+++.++. ++..+++||+|+... ..++++. + + +.+
T Consensus 164 ~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~--~---~----~~~--- 228 (452)
T PRK11273 164 AHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCG---LPPIEEY--K---N----DYP--- 228 (452)
T ss_pred HHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcC---CCChhhh--h---h----ccc---
Confidence 9988864 44443333333459999999988776665 445667899886421 1111000 0 0 000
Q ss_pred ccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 013910 175 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQS 254 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
.+.++ ++.++ . ..++.+ ....++.+. ........+.....+++...+.|.+..+..
T Consensus 229 ------~~~~~--~~~~~---------~--~~~~~~--~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~ 284 (452)
T PRK11273 229 ------DDYNE--KHEQE---------L--TAKQIF--MQYVLPNKL---LWYIAIANVFVYLLRYGILDWSPTYLKEVK 284 (452)
T ss_pred ------ccccc--ccCCC---------c--cHHHHH--HHHHHcChH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000 00000 0 000000 011111111 111112222222333444444444332110
Q ss_pred CCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhh--chhHHHH-HHHHHHHHHHHHHHhh-h-hhHHHHHHH
Q 013910 255 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMT-IMFIFVCIFLLPLVTL-Q-SNILLTALL 329 (434)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--gRR~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 329 (434)
+.+.........+..+..+++.+++|+++||+ +||.... ....+..+....+... . +........
T Consensus 285 ----------g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
T PRK11273 285 ----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACM 354 (452)
T ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHH
Confidence 01111122223345567788999999999999 5554332 2222222221111111 1 111111111
Q ss_pred HHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhh-HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 330 SGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMV-CPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~-~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
+.......++......+..|.+|++.|+++.|+.++.+++|+.+ +|.+.+.+.|..|....+.+.+++++++.+....+
T Consensus 355 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 355 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 11111112223334456779999999999999999999998765 79999988888776666767777777776666543
Q ss_pred -ccccCC
Q 013910 409 -PFETKG 414 (434)
Q Consensus 409 -~~et~~ 414 (434)
.+|+|+
T Consensus 435 ~~~~~~~ 441 (452)
T PRK11273 435 MIGEKRH 441 (452)
T ss_pred hccccch
Confidence 344443
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=8.8e-23 Score=197.89 Aligned_cols=311 Identities=17% Similarity=0.198 Sum_probs=194.6
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+.+.||+|||+++..+.++..++.++.++++|+..++++|++.|++.|... ....+..|+.| ++||++.++...+..+
T Consensus 59 G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 137 (377)
T TIGR00890 59 GLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGL 137 (377)
T ss_pred HHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcch
Confidence 368999999999999999999999999999999999999999999987653 34445678876 6799999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~-~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|..+++++...+.+..+||+.|.+.++..++..+.. ++++|+|+-. + ++ +
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~----------------~~---~------ 188 (377)
T TIGR00890 138 GSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL----I----------------KT---N------ 188 (377)
T ss_pred hHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc----c----------------cc---C------
Confidence 988776666666667799999999888877765444 4455544200 0 00 0
Q ss_pred CCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
.+.+ ++ + .+.+..++ ++.+. .. ...+...+.......+.+.+..+.
T Consensus 189 -~~~~------~~--------~---------~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~----- 235 (377)
T TIGR00890 189 -IEVS------VK--------D---------YTVWEMLRTPQFWV-LY---LSFFLNAVSGLLLIGLYKPYGQSL----- 235 (377)
T ss_pred -cccc------hh--------h---------hhHHHHHcCccHHH-HH---HHHHHHhHHHHHHHHHHHHHHHHc-----
Confidence 0000 00 0 00111111 22211 11 111111111111111111111100
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHH
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFS 336 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 336 (434)
+.+............+..+++.++.+++.||+|||+.+..+..+..+....+..... ............+..
T Consensus 236 ------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 309 (377)
T TIGR00890 236 ------GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTW 309 (377)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHh
Confidence 111111122334455677889999999999999999888776666554443332221 111111111111122
Q ss_pred hhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 013910 337 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 401 (434)
Q Consensus 337 ~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~ 401 (434)
....+....+.+|.+|++.|+++.|+.+....+|+.++|.+.+.+.+..|....+.+.+++++++
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 310 GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 22334556678899999999999999999999999999999998888766656666666655554
No 34
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=2.3e-22 Score=201.35 Aligned_cols=327 Identities=13% Similarity=0.062 Sum_probs=186.6
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
++..++.||+|||+.+..+.+++.++.++.++++|+..++++|++.|++.+.......++.|++|+++||++.++.+...
T Consensus 89 ~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~ 168 (476)
T PLN00028 89 LAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWG 168 (476)
T ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHH
Confidence 34457899999999999999999999999999999999999999999987754334456889999999999999988776
Q ss_pred HHHHHHHHHHHHHH----hc-----ccchHHHHHHHHHHHHHHHHHHHhcC-CChhHHhhcCChHHHHHHHHHHHHHcCC
Q 013910 99 TFGSVSEAALAWIV----MP-----ILTWRWLLALSAIPAFVLLIFIVFMP-ESPRYLCTKGRITDAHNILDKIAQFNQT 168 (434)
Q Consensus 99 ~~G~~l~~~l~~~~----~~-----~~~Wr~~f~~~~i~~~l~~~~~~~lp-ESp~~l~~~~~~~~a~~~l~~~~~~~~~ 168 (434)
.+|..+++.+...+ .. ..+||+.|++.+++.++..+..++++ |.|+ ++.++.+ +
T Consensus 169 ~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~-------~---- 232 (476)
T PLN00028 169 NLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK-------K---- 232 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH-------h----
Confidence 66766665444322 11 25899999999888777655544444 3342 1100000 0
Q ss_pred CCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhc-cCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 169 SLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLML-FSPRFFKTTILLWVLYFGNSFVYYGIVLLAS 247 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 247 (434)
+. +.++.. ....++.. .+++. ...+..++......++...+.+
T Consensus 233 ---------------~~---~~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p 276 (476)
T PLN00028 233 ---------------SG---TMPKDS--------------FSKVLRYGVTNYRT----WILALTYGYSFGVELTMDNIIA 276 (476)
T ss_pred ---------------cC---cccccc--------------HHHHHHHHHcCchh----HHHHHHHHHHHHHHHHHHhHHH
Confidence 00 000000 00011111 11221 1222222222222233332322
Q ss_pred hhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhH-------HHHHHHHHHHHHHHHHHhhh
Q 013910 248 ELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-------SMTIMFIFVCIFLLPLVTLQ 320 (434)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~-------~~~~~~~~~~~~~~~~~~~~ 320 (434)
.+.... .+.+.........+..+++++|.+++|+++||++||. .......+.++.++.+....
T Consensus 277 ~~l~~~----------~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~ 346 (476)
T PLN00028 277 EYFYDR----------FGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN 346 (476)
T ss_pred HHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc
Confidence 222110 0111112222334556778899999999999998762 22222222222222222222
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHH
Q 013910 321 SNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVL 400 (434)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i 400 (434)
+............++..+..+..+.+.+|+.| +.|+++.|+.+..+++|++++|.+.. ..+..+....+++++++.++
T Consensus 347 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 347 SLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHH
Confidence 22221111111112222334456677778765 68999999999988898888887654 11222234566777777777
Q ss_pred HHHHHHhcc
Q 013910 401 SVVVILLIP 409 (434)
Q Consensus 401 ~~~~~~~~~ 409 (434)
+.++.++..
T Consensus 425 ~~~~~~~~~ 433 (476)
T PLN00028 425 CTLPVAFIH 433 (476)
T ss_pred HHHHHHhee
Confidence 776666554
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=1.6e-22 Score=202.51 Aligned_cols=333 Identities=14% Similarity=0.136 Sum_probs=198.1
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhh--cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAF--SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~--~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+.||+|||+.+..+.+++++++++..+ ..++..+++.|+++|++.+... ....++.|+.|+++||+..++...+..
T Consensus 98 ~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 177 (465)
T TIGR00894 98 YLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQ 177 (465)
T ss_pred HHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 6899999999999999999998887644 3668899999999999998864 556788999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHH-hcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 100 FGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~-~~Wr~~f~~~~i~~~l~~~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
+|.++++.+...+.+. .+||+.|++.++++++..+.++ +.||+|+.. .+.++.++ +.+.+..
T Consensus 178 ~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~--~~i~~~~----------- 241 (465)
T TIGR00894 178 LGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH---PCISKFEK--KYINSSL----------- 241 (465)
T ss_pred HHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC---CCCCHHHH--HHHHhhc-----------
Confidence 9999999998887777 4999999999998887765544 467888521 11111111 1111000
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 257 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
+++.++ . ..+ ..++..++.+ .........+.....++.+..+.|.+.....
T Consensus 242 ------~~~~~~--~------------~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~--- 292 (465)
T TIGR00894 242 ------QGQKGS--T------------RQS---LPIKAIPKSL---PVWAIWFAIFGHFWLYTILPTYLPTFISWVL--- 292 (465)
T ss_pred ------ccccCC--C------------CCC---CCHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 000000 0 000 0122222221 1112233333444444444444444332110
Q ss_pred cccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHH--------HHHHHH--HHHHHHHHHh-hhhhHHHH
Q 013910 258 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSM--------TIMFIF--VCIFLLPLVT-LQSNILLT 326 (434)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~--------~~~~~~--~~~~~~~~~~-~~~~~~~~ 326 (434)
+.+.........+..+..+++.+++|+++||+++|+.. ..+... ..+..+.... ..+.....
T Consensus 293 -------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (465)
T TIGR00894 293 -------RVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTI 365 (465)
T ss_pred -------CcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 01111111223344567788999999999998655211 111111 1111111111 11112222
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhc--c-hhhHHHHHHHHHHHHHH
Q 013910 327 ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--H-QTAAILLLEALIVLSVV 403 (434)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~--g-~~~~~~~~~~~~~i~~~ 403 (434)
........+..+.....+....|..|. .++++.|+.+..+.++++++|.+.+.+.+.. + ....+.+.++..+++.+
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i 444 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVI 444 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHH
Confidence 222222222222233445556677776 8999999999999999999999998776643 2 23455666666666665
Q ss_pred HHHhc
Q 013910 404 VILLI 408 (434)
Q Consensus 404 ~~~~~ 408 (434)
+..+.
T Consensus 445 ~~~~~ 449 (465)
T TIGR00894 445 FYLIF 449 (465)
T ss_pred Heeee
Confidence 55444
No 36
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.3e-21 Score=184.79 Aligned_cols=313 Identities=20% Similarity=0.246 Sum_probs=207.3
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.++||+-||+.++....++.++++++++++||..+.++|++.|++-|... +...+..+..|+++|+++.+....+.+++
T Consensus 70 ~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA 149 (394)
T COG2814 70 LLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLA 149 (394)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999988864 45567789999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 180 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 180 (434)
.++|.+++.++.+..|||+.|...+..+++..+ .+..+| |+-. .
T Consensus 150 ~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~-----~---------------------------- 194 (394)
T COG2814 150 TVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEI-----S---------------------------- 194 (394)
T ss_pred HHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccC-----C----------------------------
Confidence 999999999999999999999999888887644 566788 3200 0
Q ss_pred CCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 013910 181 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 260 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (434)
+... .+ ..+..+.+.+|+.+...... .+++.-.+..|.+ ..|.+.+..
T Consensus 195 ----~~~~-~~-----------------~~~~~~~l~~p~v~~~l~~t-~l~~~g~F~~ftY--i~P~L~~v~------- 242 (394)
T COG2814 195 ----GSLP-GP-----------------LRTLLRLLRRPGVLLGLLAT-FLFMTGHFALYTY--IRPFLESVA------- 242 (394)
T ss_pred ----CCCC-cc-----------------hhHHHHHhcCchHHHHHHHH-HHHHcchhhhHHh--HHHHHHHcc-------
Confidence 0000 00 00012223334433333222 2222222222222 222222111
Q ss_pred ccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHhhh
Q 013910 261 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGT 339 (434)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 339 (434)
+.+....-...+..++++++|..++|.+.|| +.|+.+........+.++.+.+.. +.+......+.. .+...+
T Consensus 243 ----g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~w-g~a~~~ 316 (394)
T COG2814 243 ----GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLW-GFAFSP 316 (394)
T ss_pred ----CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH-HHHhhh
Confidence 1122233345567778899999999999999 777777766555555444444322 222222222221 111122
Q ss_pred -hhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 340 -FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 340 -~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
........++ .-++.+..+.++....-++|..++..+.+.++|..|.....++-+...+++.++.....
T Consensus 317 ~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 317 ALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223334455 33577899999999999999999998888888886655555555566666655555443
No 37
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=2.1e-21 Score=190.16 Aligned_cols=318 Identities=14% Similarity=0.176 Sum_probs=198.8
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
+.++..||+|||+.+..+..+..++.++.++++|+..+++.|+++|++.|... ....++.|+.|+++||...+..+...
T Consensus 61 ~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 140 (394)
T PRK03699 61 LNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFF 140 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999999999999887653 44567889999999999999988888
Q ss_pred HHHHHHHHHHHHHHh-cccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 99 TFGSVSEAALAWIVM-PILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~-~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
.+|..+++.+...+. +..+||+.|.+.+++.++..+..++ .+.|+. ++. +
T Consensus 141 ~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~----~~~--------------------~---- 191 (394)
T PRK03699 141 SMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPAL----GKH--------------------A---- 191 (394)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccc----ccc--------------------C----
Confidence 888888887765544 4579999999888776665443332 222220 000 0
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCS 257 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
++ +++ + . .+.. +++ +........+.....++++..+.+.+..+..
T Consensus 192 ------~~----~~~-~-----~-----~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--- 236 (394)
T PRK03699 192 ------PK----ADK-P-----V-----AKEK-------WGI----GVLFLAIAALLYILAQLTFISWVPEYAQKKF--- 236 (394)
T ss_pred ------cc----ccC-c-----c-----cccc-------CCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 00 000 0 0 0000 011 1112222222222333444444443332110
Q ss_pred cccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 013910 258 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSM 337 (434)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
+.+............+...+|.+++++++||++||+.+.....+..+.+..+....+........+...++..
T Consensus 237 -------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 309 (394)
T PRK03699 237 -------GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSS 309 (394)
T ss_pred -------CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 0000111111223345678899999999999999998877665555443333322222222122122222233
Q ss_pred hhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 338 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 338 ~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
+.++....+..|..|.+ ++...|....++++|+.++|.+.+.+.+..|....++..+++++++.+..+...
T Consensus 310 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 310 AIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHH
Confidence 44555566677777754 677889999999999999999999998877766677776777666665555543
No 38
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.91 E-value=1.3e-21 Score=194.33 Aligned_cols=341 Identities=15% Similarity=0.179 Sum_probs=198.3
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhc----ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFS----PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~----~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
++.||+|||+.+..+.++..++.++.++. +++..+.+.|++.|++.|... ....++.|+.|+++||+..++++.+
T Consensus 83 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~ 162 (438)
T TIGR00712 83 SVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCA 162 (438)
T ss_pred hhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHH
Confidence 68999999999999999988888877654 567888999999999987753 4456778999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HhcccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCc
Q 013910 98 WTFGSVSEAALAWI-VMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNL 175 (434)
Q Consensus 98 ~~~G~~l~~~l~~~-~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 175 (434)
..+|..+++.+... +....+||+.|++.++.+++.. +..+++||+|+....+. . +.. ++ +
T Consensus 163 ~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~-~~~---------~~-~------ 224 (438)
T TIGR00712 163 HNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPP-I-EEY---------RN-D------ 224 (438)
T ss_pred HHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCC-c-hhc---------cc-c------
Confidence 99999888876554 3335689999999888877654 45566899886421000 0 000 00 0
Q ss_pred cCCCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Q 013910 176 TSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQS 254 (434)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
..++..++. +. +. ..++. .....++ ++.+.... ..+.....+++...+.+.+..+..
T Consensus 225 ------~~~~~~~~~-~~--------~~-~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~l~~~~ 282 (438)
T TIGR00712 225 ------YPDDYNEKA-EQ--------EL-TAKEI--FMQYVLPNKLLWYIAI----ANVFVYLLRYGVLDWSPTYLKEVK 282 (438)
T ss_pred ------ccccccccc-cc--------cc-chHHH--HHHHHccCchHHHHHH----HHHHHHHHHHHHHHhHHHHHHHcc
Confidence 000000000 00 00 00000 0011222 22221111 111122223334333333322110
Q ss_pred CCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHH---HHHHHHHh-h-hhhHHHHHHH
Q 013910 255 KCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVC---IFLLPLVT-L-QSNILLTALL 329 (434)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~---~~~~~~~~-~-~~~~~~~~~~ 329 (434)
+.+............+.++++.+++++++||+++++....+..... +....... . .+.+......
T Consensus 283 ----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (438)
T TIGR00712 283 ----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICM 352 (438)
T ss_pred ----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 1111111223344556788999999999999954321112211111 11111111 1 1112111111
Q ss_pred HHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhH-hhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 330 SGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~-~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
+.......++.........|.+|++.|+++.|+.+.++++++ .++|.+.+.+.|..|....+.+..+.++++.+..+++
T Consensus 353 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 353 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred HHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 111111122222233457799999999999999999999875 5789999988887776666677777777888888888
Q ss_pred ccccC
Q 013910 409 PFETK 413 (434)
Q Consensus 409 ~~et~ 413 (434)
.||.|
T Consensus 433 ~~~~~ 437 (438)
T TIGR00712 433 MIGEK 437 (438)
T ss_pred Hhhcc
Confidence 88876
No 39
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=6.1e-21 Score=185.36 Aligned_cols=313 Identities=18% Similarity=0.149 Sum_probs=187.1
Q ss_pred hhHhhhcchHHHHH-HHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhH--HHHHHHHH
Q 013910 23 LYFIFAFSRMSILG-GALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKW--MVVFSTFW 98 (434)
Q Consensus 23 ~~~~~~GRr~~l~~-~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~--~~~~~~~~ 98 (434)
.+.||+|||+.++. +.....++.++.++++|+..+++.|++.|.+.+.. +....+..|+.|+++|++. .+....+.
T Consensus 55 ~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (375)
T TIGR00899 55 TRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQI 134 (375)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Confidence 58999999987665 45555667778889999999999999998766544 3344566788888877754 57777788
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 99 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
.+|.++++.++..+.+..+||+.|++.+++.++..+. .+++||+|++...+
T Consensus 135 ~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 186 (375)
T TIGR00899 135 SLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA---------------------------- 186 (375)
T ss_pred hHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc----------------------------
Confidence 8999999998888888889999999998877666544 45589877521000
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
+.+. + ....+ +++.+.........+............+.....
T Consensus 187 ----~~~~-----~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 230 (375)
T TIGR00899 187 ----LTRL-----E---------------------VRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHEL------ 230 (375)
T ss_pred ----cCcc-----h---------------------hhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHc------
Confidence 0000 0 00001 111111111111122211111111111111000
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 336 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
+.+...............+++..+++++.||+|||+.+..+.....+.........+.+..........++.
T Consensus 231 --------g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 231 --------GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111122333455677888999999999999887765554443333222222222211111111112
Q ss_pred hhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 337 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 337 ~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
....+....+..|..|++ |+++.++.+...++|+.++|.+.+.+.+..+....+.+.+++++++.+...++
T Consensus 303 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 223445566778999876 56999999999999999999999988887665566666667666666655443
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=6.9e-21 Score=182.58 Aligned_cols=293 Identities=27% Similarity=0.359 Sum_probs=208.3
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+.||+|||+.+..+.....++.+...+.+++..+++.|++.|++.+... ....++.|+.|+|+|++..++.+....+|
T Consensus 56 ~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 135 (352)
T cd06174 56 YLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLG 135 (352)
T ss_pred HHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999988764 45678899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 181 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
..+++.++..+.+..+||+.+.+.+++.++..+...+++ |+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------------------------ 177 (352)
T cd06174 136 ALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL--RLL------------------------------------ 177 (352)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--HHH------------------------------------
Confidence 999999998888888899999998887777655554443 100
Q ss_pred CCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q 013910 182 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSIL 261 (434)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (434)
.......+.....+.....+.+.+..+.
T Consensus 178 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 205 (352)
T cd06174 178 --------------------------------------------LLLALAFFLLSFGYYGLLTYLPLYLQEV-------- 205 (352)
T ss_pred --------------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHh--------
Confidence 0011111111111111111111111100
Q ss_pred cccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhH-HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhh
Q 013910 262 LSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-SMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTF 340 (434)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
.+.+............+..+++..+.+.+.||.|||+ .+..+..+..+.........+.+..........++.....
T Consensus 206 --~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 283 (352)
T cd06174 206 --LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAF 283 (352)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccc
Confidence 0111122233445556778889999999999999999 8877776666555544433322222222222222333445
Q ss_pred hhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 013910 341 IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 341 ~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
+....+..|..|++.|+++.|+.+...++++.++|.+.+.+.+..+....+.+.+++.+++.+..++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 284 PALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 6778899999999999999999999999999999999998887666666777777777777665543
No 41
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=8.2e-22 Score=191.24 Aligned_cols=316 Identities=16% Similarity=0.226 Sum_probs=185.8
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
..++.||+|||+.+..+.++..++.++.++++++..+++.|++.|++.+... ....++.|+.|+++|++..++.+.+..
T Consensus 50 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 129 (379)
T TIGR00881 50 MGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHN 129 (379)
T ss_pred hhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccch
Confidence 3478999999999999999999999999999999999999999999988754 556688999999999999999999999
Q ss_pred HHHHHHH-HHHHHHhcccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 100 FGSVSEA-ALAWIVMPILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 100 ~G~~l~~-~l~~~~~~~~~Wr~~f~~~~i~~~l~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
+|..+++ .++..+....+||+.|.+.++..++. ++..++.||+|+.. ++.++ ++. .
T Consensus 130 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------~~~--~- 187 (379)
T TIGR00881 130 VGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC---GLPPA----------------EEM--P- 187 (379)
T ss_pred hHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc---ccCcc----------------ccC--c-
Confidence 9999999 45666666789999999888766655 34455678877521 00000 000 0
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
.++.++..+ .++ ++. ..++ .....+++ +..+. .....+......++...+.+.+....
T Consensus 188 --~~~~~~~~~-~~~--------~~~-~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--- 246 (379)
T TIGR00881 188 --NEEPDGDAE-KKE--------EEL-TKKQ--IFLQYVLLNKVLWY----ISLGYVFVYVVRTGILDWSPLYLTQE--- 246 (379)
T ss_pred --ccccccccc-ccc--------ccc-cchH--HHHHHHHhcchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 000000000 000 000 0000 01112222 22221 11111111112222222222221100
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhc-hhHH-HHHHHHHH-HHHHHHHHh--hhhhHHHHHHHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVG-RKLS-MTIMFIFV-CIFLLPLVT--LQSNILLTALLSG 331 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~g-RR~~-~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 331 (434)
.+.+............+.+++|.++++++.||.. ||+. ........ .+.+..... ..+..........
T Consensus 247 -------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (379)
T TIGR00881 247 -------KGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFA 319 (379)
T ss_pred -------hCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH
Confidence 0111111222334455677889999999999863 3332 22211111 111111111 1111111111111
Q ss_pred HHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 332 ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 332 ~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
...+..++....+.+.+|.+|++.|+++.|+.+.++.+++.++|.+.+.+.+..|
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 320 LGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred HHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 1122334445567788999999999999999999999999999999998888654
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.90 E-value=2.4e-21 Score=187.08 Aligned_cols=300 Identities=13% Similarity=0.107 Sum_probs=189.2
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcc-----cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSP-----NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS 95 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~-----~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~ 95 (434)
..+.||+|||+.+..+.++..++.++..+++ |+..+++.|++.|++.+... ....++.|+.|+++|++..++.+
T Consensus 55 G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (365)
T TIGR00900 55 GALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQ 134 (365)
T ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHH
Confidence 3689999999999999999888888887777 99999999999999887754 45678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhc--CCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCC
Q 013910 96 TFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM--PESPRYLCTKGRITDAHNILDKIAQFNQTSLPSG 173 (434)
Q Consensus 96 ~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~l--pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~ 173 (434)
.+..+|.++++.++..+.+..+||+.|++.++..++..+..+.+ ||+++ +++
T Consensus 135 ~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------------- 188 (365)
T TIGR00900 135 AVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA----SEI---------------------- 188 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC----ccc----------------------
Confidence 99999999999999888888899999998877666554443332 32211 000
Q ss_pred CccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcc
Q 013910 174 NLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGS 252 (434)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 252 (434)
++ .+++ ..++ ....++.+++++............ ...+++.. .+.+.+...
T Consensus 189 ----------~~----~~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 240 (365)
T TIGR00900 189 ----------QA----LSNA-VLRD----------TREGIKFVLKNPLLRTLLLLALLF---NLVFAPAIVALFPYVQSK 240 (365)
T ss_pred ----------cc----cchh-HHHH----------HHhHHHHHHcCcHHHHHHHHHHHH---HHHHHHHHHHHhHHHHHH
Confidence 00 0000 0000 001122223222222222211111 11111111 111111110
Q ss_pred cCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHH
Q 013910 253 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSG 331 (434)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 331 (434)
. .+.+............++.+++.++.+++.||.+||+.+..+..+.++.........+ .+........
T Consensus 241 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T TIGR00900 241 Y----------LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFA 310 (365)
T ss_pred H----------hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH
Confidence 0 0011111222233445677888999999999999999887765555544443333222 2221111111
Q ss_pred HHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 013910 332 ARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 385 (434)
Q Consensus 332 ~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~ 385 (434)
..++.....+....+..|..|++.|+++.|+.+.+.++++.++|.+.+.+.|..
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 112222334566788899999999999999999999999999999999887753
No 43
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=9.1e-21 Score=185.53 Aligned_cols=308 Identities=18% Similarity=0.067 Sum_probs=187.6
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHH---hh-----cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLS---AF-----SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMV 92 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~---~~-----~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~ 92 (434)
..+.||+|||+.+..+.+...++.+.. +. .+|+..++++|+++|++.+... ....+..|+.|+++|+++.+
T Consensus 72 G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~ 151 (392)
T PRK12382 72 GRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMS 151 (392)
T ss_pred hHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhh
Confidence 368999999999999888776654422 22 3578999999999999987643 34567789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCC
Q 013910 93 VFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 172 (434)
Q Consensus 93 ~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 172 (434)
+.+.+...|..++++++..+.+..+||+.+.+..+..++........||.|..
T Consensus 152 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 204 (392)
T PRK12382 152 WNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPAH--------------------------- 204 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCCC---------------------------
Confidence 99999999999999998888778899998776655443332222222332110
Q ss_pred CCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 013910 173 GNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGS 252 (434)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (434)
++ ++.+ . + +..+.++.+ ....... ...+.....+.+.+..+
T Consensus 205 -----------~~-----~~~~-----~------~---~~~~~~~~~-----~~~~~l~----~~~~~~~~~~~~~~~~~ 245 (392)
T PRK12382 205 -----------AG-----ERPS-----L------W---SVVGLIWKP-----GLGLALQ----GVGFAVIGTFVSLYFAS 245 (392)
T ss_pred -----------cc-----cCch-----H------H---HHHHHHHHh-----HHHHHHH----HHHHhHHHHHHHHHHHh
Confidence 00 0000 0 0 000001101 0011010 11111111111111111
Q ss_pred cCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 013910 253 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGA 332 (434)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
.+ .... ........+..+++.++.+.+.||+|||+.+..+..+..+.........+...........
T Consensus 246 ~~-----------~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 246 KG-----------WAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred cC-----------Cchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 00 0011 1122234455678889999999999999888776655554443333322222211111111
Q ss_pred HHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 333 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 333 ~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
........+.......|.+|++.|+++.|+.++...+++.++|.+.+.+.+..|....+.+.+.+.+++.+..++.
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 1111122344556678899999999999999999999999999999988887776667777777777776666544
No 44
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.89 E-value=4.1e-20 Score=185.63 Aligned_cols=326 Identities=18% Similarity=0.159 Sum_probs=200.1
Q ss_pred hhhhhhhhhHhhh-----cchHH-HHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCC
Q 013910 16 PKLLLEPLYFIFA-----FSRMS-ILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPS 85 (434)
Q Consensus 16 ~~~~~~~~~~~~~-----GRr~~-l~~~~~~~~i~~~~~~~~---~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~ 85 (434)
.|.++.| +.||+ |||+. +..+.+...++..+.++. +++..+.+.|++.|++.+.. .....+..|++|++
T Consensus 61 ~~~l~gp-l~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 61 FKFLWSP-LMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHH-HHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 4555554 78999 99986 556666666666666665 46888999999999877654 34557889999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHH
Q 013910 86 NRGKWMVVFSTFWTFGSVSEAALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQ 164 (434)
Q Consensus 86 ~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~-~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~ 164 (434)
+||+..++.+.++.+|.++++.+...+.+ ..|||..|++.++..++..+..+++||+|+.. .+ ++
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~-~~---------- 205 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---PV-PK---------- 205 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc-cc----------
Confidence 99999999999999999999988888777 57999999998887777666666678875410 00 00
Q ss_pred HcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHH-HHHHHHHHHHH
Q 013910 165 FNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLY-FGNSFVYYGIV 243 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ 243 (434)
+ .++ . ...++.++++++...........+ ...... ..
T Consensus 206 --------------------~----~~~-~--------------~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~---~~ 243 (491)
T PRK11010 206 --------------------T----LEQ-A--------------VVAPLRDFFGRNNAWLILLLIVLYKLGDAFA---MS 243 (491)
T ss_pred --------------------c----hhh-h--------------HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH---HH
Confidence 0 000 0 000122222222211121211111 111111 11
Q ss_pred HHHHhhhcccCCCCcccccccCccchhHHHH-HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHH---HHhh
Q 013910 244 LLASELSGSQSKCSSSILLSENVQDASVYIN-VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP---LVTL 319 (434)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~---~~~~ 319 (434)
...+.+.... +.+....... .....+..++|.+++++++||+|||+.+.++.+...+..+. +...
T Consensus 244 ~~~~~l~~~~-----------G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~ 312 (491)
T PRK11010 244 LTTTFLIRGV-----------GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT 312 (491)
T ss_pred HHHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111111100 1111111111 12334677899999999999999988776655443332221 1121
Q ss_pred hhhHHH-HHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHH
Q 013910 320 QSNILL-TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALI 398 (434)
Q Consensus 320 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~ 398 (434)
..+... ........++........+.+..++.|++.+++..|+.++...+|+.+.+.+.+.+.|..|....+.+.++++
T Consensus 313 ~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~ 392 (491)
T PRK11010 313 DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAA 392 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 112111 1111111111112234457788899999999999999999999999888888899988877666677777777
Q ss_pred HHHHHHHHhcc
Q 013910 399 VLSVVVILLIP 409 (434)
Q Consensus 399 ~i~~~~~~~~~ 409 (434)
+++.+..++..
T Consensus 393 l~~l~~~~~~~ 403 (491)
T PRK11010 393 VPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHH
Confidence 78777776664
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=2.7e-21 Score=194.53 Aligned_cols=334 Identities=14% Similarity=0.158 Sum_probs=197.4
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+++.||+|||+.+..+..+..++++++++++|+..++++|+++|++.+... ....++.|++|+++||+..+++.....
T Consensus 57 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 136 (485)
T TIGR00711 57 TGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVL 136 (485)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999988754 556788999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHH-------HHcCCCCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIA-------QFNQTSLP 171 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~-------~~~~~~~~ 171 (434)
+|..+++.++..+.++.+||+.|++.+.++++..+ ..+++||+++- .+++.|.....+.... ...+.+
T Consensus 137 ~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~-- 212 (485)
T TIGR00711 137 VAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPE-- 212 (485)
T ss_pred HHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCC--
Confidence 99999999998888889999999998877666544 34557775541 1222222211111000 000000
Q ss_pred CCCccCCCCCCCcccccCCCCccccc-------cccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 172 SGNLTSDGTNDLDEEFSTSEETPLLS-------SARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVL 244 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (434)
++..++.+...... .....+...+++....+.+.+++........... .+.+++...
T Consensus 213 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 276 (485)
T TIGR00711 213 ------------RGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLL----GLGLYGSFY 276 (485)
T ss_pred ------------CCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHH----HHHHHHHHH
Confidence 00000000000000 0000000001111122222233333222222222 222222222
Q ss_pred HHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh-h--hh
Q 013910 245 LASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-L--QS 321 (434)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~-~--~~ 321 (434)
+.+.+.... .+.+............+..+++.++++++.||+|||+.+..+..+..+....+.. . ..
T Consensus 277 ~~p~~~~~~----------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 346 (485)
T TIGR00711 277 LLPLYLQQV----------LGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDT 346 (485)
T ss_pred HHHHHHHHh----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 222222110 0111112222334455677889999999999999999888776665554443331 1 11
Q ss_pred hHH-HHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 322 NIL-LTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 322 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
+.. .........+.....+........|..|++.|+++.|+.+....+|+.+++.+.+.+.+.
T Consensus 347 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 347 PFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111111111111122233445556788999999999999999999999999888877653
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.89 E-value=9.7e-20 Score=178.27 Aligned_cols=123 Identities=19% Similarity=0.217 Sum_probs=105.3
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
..++.||+|||+.+..+.+...++.++..+++|+..+++.|+++|++.+... ....++.|..|+++|++..+..+....
T Consensus 58 ~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 137 (392)
T PRK10473 58 AGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITC 137 (392)
T ss_pred HhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 4479999999999999999999999999999999999999999999987754 456678899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCCh
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESP 143 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp 143 (434)
+|..+++.++..+.+..+||+.|.+.++..++..+ ....+||++
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999998888777778999999998877666544 345677764
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=4.5e-20 Score=181.43 Aligned_cols=319 Identities=16% Similarity=0.130 Sum_probs=197.9
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
..+.||+|||+.+..+.....++.++..+++|+..+++.|++.|++.+..+....++.|..|+++|++..+.......+|
T Consensus 75 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 154 (408)
T PRK09874 75 GGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSG 154 (408)
T ss_pred HHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHH
Confidence 35899999999999999999998888888999999999999999975543444556789999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 180 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 180 (434)
.++++.++..+.+..+||+.|.+.++..++..+ ..+++||+++-. .+.++ +..
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~--------------------- 208 (408)
T PRK09874 155 ALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV---SKKEM--LHM--------------------- 208 (408)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc---cchhh--hHH---------------------
Confidence 999999988887788999999988877665544 344566653200 00000 000
Q ss_pred CCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHH-HHH-HHHHHHHHHHHHhhhcccCCCCc
Q 013910 181 NDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLY-FGN-SFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
++ ....+.+++............ ... ....+ +..+.......
T Consensus 209 -------------------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 252 (408)
T PRK09874 209 -------------------RE----------VVTSLKNPKLVLSLFVTTLIIQVATGSIAPI-LTLYVRELAGN------ 252 (408)
T ss_pred -------------------HH----------HHHhCcCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc------
Confidence 00 000111122221111111111 110 00000 00111111100
Q ss_pred ccccccCccchh--HHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 013910 259 SILLSENVQDAS--VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 336 (434)
Q Consensus 259 ~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
..... ......+..+..+++....++++||+|||+.+..+.....+..+......+.+...........+.
T Consensus 253 -------~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 325 (408)
T PRK09874 253 -------VSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAAD 325 (408)
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 00000 001112234555677778899999999999888776665554443333222222211111111112
Q ss_pred hhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 337 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 337 ~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
....+.......+..|.+.|++..++.+.+..+|..++|.+.+.+.+..+....+.+.+++.+++.+..++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 326 GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 2223444555678889999999999999999999999999999888876666677777777777776666543
No 48
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.88 E-value=6.3e-20 Score=178.94 Aligned_cols=312 Identities=13% Similarity=0.093 Sum_probs=186.5
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+++.||+|||+++..+..+..++.++.++++|++.+++.|++.|++.|... ....++.|+.|+++|++..+.+..+..+
T Consensus 59 g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (382)
T PRK10091 59 ALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV 138 (382)
T ss_pred HHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999999999999988754 3345678999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|..+++.++..+.+..+||+.|.+.++..++..+ ...++||.++ +.+.+
T Consensus 139 g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~----~~~~~-------------------------- 188 (382)
T PRK10091 139 ANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD----EAKGG-------------------------- 188 (382)
T ss_pred HHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc----ccccC--------------------------
Confidence 9999999888887778999999998887665543 4456777542 00000
Q ss_pred CCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcccCCCCc
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIV-LLASELSGSQSKCSS 258 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 258 (434)
.+ + .++.+.+++.+. ........+ ...+... +..+.+...
T Consensus 189 ---~~----------------~----------~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 229 (382)
T PRK10091 189 ---LR----------------E----------QFHFLRSPAPWL---IFAATMFGN-AGVFAWFSYIKPYMMFI------ 229 (382)
T ss_pred ---HH----------------H----------HHHHhcChHHHH---HHHHHHHHH-HHHHHHHHHHHHHHHHh------
Confidence 00 0 000111111111 110111111 1111100 111111100
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGARMFSM 337 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 337 (434)
.+.+............+..+++.++.+++.||+|+|+.+..+..+..+..+.+.. .++.+..............
T Consensus 230 -----~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 304 (382)
T PRK10091 230 -----SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLF 304 (382)
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 0111112222334555678899999999999999999887766555544332222 2222221111111111111
Q ss_pred hhhh-hhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHhcc
Q 013910 338 GTFI-IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 338 ~~~~-~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g-~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
+..+ .......+..|.+.++.+ ..+....+|+.++|.+.+.+.|..+ ....+...+..+.+.......+.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 305 ALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred hhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 1112 222344455565555554 3466778999999999998888643 34455555555555544444443
No 49
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.88 E-value=1.5e-19 Score=176.80 Aligned_cols=122 Identities=23% Similarity=0.278 Sum_probs=105.6
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+.+.||+|||+.+..+.++..++.++.++++|++.+++.|+++|++.|... ....++.|++|+|+|++..+....+.++
T Consensus 76 g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~ 155 (394)
T PRK10213 76 TQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSI 155 (394)
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999988754 4556788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCCh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESP 143 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp 143 (434)
|.++++.++..+.+..+||+.|++.++.+++..+. ....||+|
T Consensus 156 g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 156 ALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999998888889999999987766654433 33467654
No 50
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.5e-19 Score=176.97 Aligned_cols=315 Identities=13% Similarity=0.131 Sum_probs=177.9
Q ss_pred hHhhhcchHHHH-HHHHHHHHHHHHHhhcccHHHHHHHHHHHH-hcCCCchhhhhhhhhccCCCcc--hhHHHHHHHHHH
Q 013910 24 YFIFAFSRMSIL-GGALVTFVAGLLSAFSPNYISLLILRGLAG-AGLGSGHVFFSWFMEFVPPSNR--GKWMVVFSTFWT 99 (434)
Q Consensus 24 ~~~~~GRr~~l~-~~~~~~~i~~~~~~~~~~~~~l~~~R~l~G-ig~g~~~~~~~~~~E~~p~~~R--g~~~~~~~~~~~ 99 (434)
+.||+|||+.++ .+.+...++..+.++++++..+++.+.+.| .+....+....+..|+.|++.| +...+..+.+.+
T Consensus 74 ~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK15011 74 RSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVS 153 (393)
T ss_pred HHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Confidence 499999998754 555666677777788999998776655544 4432233444566677777666 345578888999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
+|.+++++++..+.+..|||..|.+.++..++..+ .+.++||+|+- + +.
T Consensus 154 lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~-~~-------------------------- 203 (393)
T PRK15011 154 LAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE---L-PL-------------------------- 203 (393)
T ss_pred HHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC---C-cc--------------------------
Confidence 99999999999888888999999998877666544 45567876530 0 00
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
. ++ +.+. .+ +++ ++.+.........+.. ++....+.+.+..+.
T Consensus 204 ~----~~-----~~~~-----~~-----~~~---------~~~~~~~~~~~~~~~~----~~~~~~~~p~~l~~~----- 246 (393)
T PRK15011 204 A----TG-----TLEA-----PR-----RNR---------RDTLLLFVICTLMWGT----NSLYIINMPLFIINE----- 246 (393)
T ss_pred c----cc-----cccc-----cc-----ccc---------ccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH-----
Confidence 0 00 0000 00 000 0001111111111111 111111122111100
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMG 338 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
.+.+...............+++.+++++++||+|||+.+..+.....+.........+.+...............
T Consensus 247 -----~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 247 -----LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 001111111112233355677889999999999999877665544443332222222222211111111111111
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
..+....+..|.+|++ |+++.++.+...++|+.++|.+.+.+.+..+....+.+.+++++++.+..++. ||+
T Consensus 322 ~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 393 (393)
T PRK15011 322 LGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI-KDV 393 (393)
T ss_pred HHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh-cCC
Confidence 1233455678999976 99999999999999999999999988886665555555566666665555554 453
No 51
>PRK10504 putative transporter; Provisional
Probab=99.88 E-value=1.9e-19 Score=180.53 Aligned_cols=340 Identities=13% Similarity=0.091 Sum_probs=192.3
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
+.+++.||+|||+.+..+..+..++.++.++++++..++++|+++|++.|... ....++.|+.|+++|+...++.....
T Consensus 64 ~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (471)
T PRK10504 64 ASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPG 143 (471)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 34468999999999999999999998888999999999999999999988753 45567789999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHHHHH------HcCCCCC
Q 013910 99 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQ------FNQTSLP 171 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~------~~~~~~~ 171 (434)
.+|..+++.++..+.+..+||+.|.+......+..+. ....||++. ++.|.+.+......... ..+.+
T Consensus 144 ~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~-- 218 (471)
T PRK10504 144 QVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSK-- 218 (471)
T ss_pred HHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999999999988888889999999887665554433 344565542 22333333222111100 00000
Q ss_pred CCCccCCCCCCCcccccCC-CCcc--ccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013910 172 SGNLTSDGTNDLDEEFSTS-EETP--LLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASE 248 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 248 (434)
.. ..........-. .... .....+++ .+++..+.+.+.+++++..........+......+...++...
T Consensus 219 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 290 (471)
T PRK10504 219 GL-----GLSPLAIAGLVAVGVVALLLYLLHARN---NNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI 290 (471)
T ss_pred cC-----CcchHHHHHHHHHHHHHHHHHHHHHhc---CCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000000000 0000 00000000 0001111222222333222211122222211111112222111
Q ss_pred hhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--hhhHH-H
Q 013910 249 LSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNIL-L 325 (434)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 325 (434)
.. +.+............+..+++..+.+.+.||+|||+.+..+..+..+....+... ..... .
T Consensus 291 ~~--------------g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (471)
T PRK10504 291 GL--------------GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLL 356 (471)
T ss_pred Hc--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHH
Confidence 11 0111111122233344556666788999999999999887766555543333321 11111 1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 326 TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
..............++.......+.+|.+.|+++.|+.+...++|..+++.+.+.+.+..+
T Consensus 357 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 357 PFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1111111112222345566777889999999999999999999999999988887766443
No 52
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.87 E-value=1.3e-20 Score=181.04 Aligned_cols=293 Identities=25% Similarity=0.343 Sum_probs=180.8
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+.+.||+|||+.+..+.++..++..+..+++|+..+++.|++.|++.+.. .....++.|+.|+++|++..+..+....+
T Consensus 53 g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 132 (352)
T PF07690_consen 53 GYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL 132 (352)
T ss_dssp HHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh
Confidence 46899999999999999999999666667677779999999999998765 45567889999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|.++++.++..+.+..+||+.|++.++..++..+. ..+++|+|.....+.
T Consensus 133 g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~----------------------------- 183 (352)
T PF07690_consen 133 GSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERES----------------------------- 183 (352)
T ss_dssp HHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--S-----------------------------
T ss_pred hhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccccc-----------------------------
Confidence 99999999998888889999999998888877553 345555543100000
Q ss_pred CCCCcccccCCCCccccccccccccccccccch-hhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSS-FLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
+.+++ + .. ++++.+ ++.+++++... ......+...+.++....+.+.+....
T Consensus 184 --~~~~~----------~-~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~----- 236 (352)
T PF07690_consen 184 --PKESE----------S-KK------PKPLKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQEV----- 236 (352)
T ss_dssp --STTTT-------------H------HHCCCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCHH-----
T ss_pred --ccccc----------c-cc------ccccccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhhhhc-----
Confidence 00000 0 00 000011 11222111111 111111222222333333333321100
Q ss_pred ccccccCcc-chhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHH
Q 013910 259 SILLSENVQ-DASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARM 334 (434)
Q Consensus 259 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 334 (434)
.+.+ .........+..+.++++.++.+.++||+++|+..........+....+.. ..+..+.........+
T Consensus 237 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 311 (352)
T PF07690_consen 237 -----LGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF 311 (352)
T ss_dssp -----HHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 0111 112222234455666777899999999999877666554444443333322 1122222222222222
Q ss_pred HHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHH
Q 013910 335 FSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 375 (434)
Q Consensus 335 ~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p 375 (434)
+.....+....+..|.+|++.|+++.|+.+....+++.++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 312 GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 23334667788999999999999999999999999998887
No 53
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.87 E-value=7.9e-19 Score=172.67 Aligned_cols=123 Identities=18% Similarity=0.152 Sum_probs=103.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+.||+|||+.+..+.....++.++..+++++..+++.|+++|++.+.. .....++.|..|+++|++..++......+
T Consensus 69 G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 148 (406)
T PRK15402 69 GPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALL 148 (406)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999988764 34556788999999999999988888888
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPR 144 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~ 144 (434)
|..+++.++..+.+..+||+.|++.++..++..+ ..+.+||+++
T Consensus 149 ~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 149 APLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 8899998888777778999999988877766544 3445677653
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.87 E-value=5.2e-19 Score=173.70 Aligned_cols=318 Identities=14% Similarity=0.125 Sum_probs=183.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHH---hh-cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLS---AF-SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFST 96 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~---~~-~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~ 96 (434)
..+.||+|||+.+..+..++.+++++. ++ .+|+..+++.|++.|+|.+... ....++.|..|+++||++.++.+.
T Consensus 69 g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 148 (402)
T TIGR00897 69 GVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWA 148 (402)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 469999999999999999998887654 23 3588899999999999876543 344567899999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCC
Q 013910 97 FWTFGS-VSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGN 174 (434)
Q Consensus 97 ~~~~G~-~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~ 174 (434)
+..+|. ++++.++..+.+..+|+..++......++.. +..+..+|.|+ +++.
T Consensus 149 ~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------------- 202 (402)
T TIGR00897 149 VYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT----PQHM---------------------- 202 (402)
T ss_pred HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC----cccc----------------------
Confidence 999997 5788877776677786555443322222222 22223333211 0000
Q ss_pred ccCCCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 013910 175 LTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQ 253 (434)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (434)
++ +.+.++ . + +..+..++ ++.+ ......+.+...+++...+.+.+..+.
T Consensus 203 ---------~~---~~~~~~----~-------~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~ 252 (402)
T TIGR00897 203 ---------QT---REKFSE----L-------G---KAATILFTNPNVL----LGGMVRIINTIGLFGFAVFLPMFVAEL 252 (402)
T ss_pred ---------cC---Ccchhh----H-------H---HHHHHHHcChhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 00 000000 0 0 01112222 2221 122223334444455444444333211
Q ss_pred CCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHH-HHHHHHHHHHHHHHh-----hhhhHHHHH
Q 013910 254 SKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMT-IMFIFVCIFLLPLVT-----LQSNILLTA 327 (434)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~ 327 (434)
+.+............++++++.++.++++||++||+... .+.....+....+.. ..+.+....
T Consensus 253 -----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 253 -----------GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred -----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 011111112223345678899999999999999887653 222222222111111 111111111
Q ss_pred HHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 013910 328 LLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
.......+..+. ........|..|+ .|+++.|+.+....+++.++|.+.+.+.+..|....+.+.+++.+++.+...|
T Consensus 322 ~~~~~G~~~~~~-~~~~~~~~~~~~~-~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 322 IAIALGIFLAGY-VPLAAVFPTLAPK-HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhhCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 111111111122 2233445677665 79999999999999999999999999998877677777777777777776666
Q ss_pred c
Q 013910 408 I 408 (434)
Q Consensus 408 ~ 408 (434)
+
T Consensus 400 ~ 400 (402)
T TIGR00897 400 I 400 (402)
T ss_pred h
Confidence 4
No 55
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.87 E-value=8e-19 Score=171.02 Aligned_cols=122 Identities=17% Similarity=0.232 Sum_probs=105.6
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+.||+|||+.+..+.++..++.+..++++++..+++.|++.|++.+... ....++.|+.|+++|++..+..+....+
T Consensus 61 g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (385)
T TIGR00710 61 GPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL 140 (385)
T ss_pred hhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999988754 4566788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCCh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESP 143 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp 143 (434)
|..+++.++..+.+..+||+.|.+.++..++..+ ..+..||++
T Consensus 141 g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 141 APAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988887788999999988777666544 344567754
No 56
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.87 E-value=2.1e-19 Score=181.09 Aligned_cols=332 Identities=13% Similarity=0.082 Sum_probs=189.5
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhh-ccCCCcchhHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFME-FVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E-~~p~~~Rg~~~~~~~~~~~ 99 (434)
..+.||+|||+.+..+..++.++++++++++|+.+++++|+++|+|.+... .....+.+ +.|+++|++..+++.....
T Consensus 62 G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~ 141 (495)
T PRK14995 62 GALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGS 141 (495)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999887643 33334444 4578999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHhhcCChHHHHHHHHH------HHHHcCCCCCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPRYLCTKGRITDAHNILDK------IAQFNQTSLPS 172 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp~~l~~~~~~~~a~~~l~~------~~~~~~~~~~~ 172 (434)
+|..+++.++..+.++.+|||.|++.....++.. +..+++||+|+-. +++.|.....+.. ........
T Consensus 142 ~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~--- 216 (495)
T PRK14995 142 GGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTAL--- 216 (495)
T ss_pred HHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhcc---
Confidence 9999999999999899999999998876655543 3456688876421 1112211111000 00000000
Q ss_pred CCccCCCCCCCcccccCCCCccc-------cccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 173 GNLTSDGTNDLDEEFSTSEETPL-------LSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLL 245 (434)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (434)
+........... .......+...+.+..++. +++.+...... ...+.....+++...+
T Consensus 217 -----------~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~-lf~~~~~~~~~---~~~~~~~~~~~~~~~~ 281 (495)
T PRK14995 217 -----------KGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMR-LFTHRIILSGV---VMAMTAMITLVGFELL 281 (495)
T ss_pred -----------ccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHH-HhCCcccHHHH---HHHHHHHHHHHHHHHH
Confidence 000000000000 0000000000111222222 23222221111 1111222223333322
Q ss_pred HHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--hhhH
Q 013910 246 ASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNI 323 (434)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~--~~~~ 323 (434)
.+...... .+.+............+...++..+.|.+.||+|||+.+..+..+..+....+... ..+.
T Consensus 282 ~~~~lq~v----------~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 351 (495)
T PRK14995 282 MAQELQFV----------HGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQ 351 (495)
T ss_pred HHHHHHHH----------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 22221100 00111111223334456677888999999999999998877766555443332221 1112
Q ss_pred H-HHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 324 L-LTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 324 ~-~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
+ .........+..............+..|.+.++.+.++.+....+|+.+++.+.+.+.+
T Consensus 352 ~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 352 WQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111111112234455566788999999999999999999999888888776654
No 57
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.86 E-value=3.6e-19 Score=174.02 Aligned_cols=309 Identities=15% Similarity=0.167 Sum_probs=186.8
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhc-----ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFS-----PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS 95 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~-----~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~ 95 (434)
..+.||+|.|+.+.++.+++++.++..+++ +|+.++++.|++.|++ |... +....+++++|+++||++.++..
T Consensus 91 G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~ 169 (462)
T PRK15034 91 SFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGING 169 (462)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHH
Confidence 368999999999999999999999999887 8999999999999998 4443 45567899999999999999997
Q ss_pred HHHHHHHHHHHHHHHHHh------------------cccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHhhcCChHHHH
Q 013910 96 TFWTFGSVSEAALAWIVM------------------PILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAH 156 (434)
Q Consensus 96 ~~~~~G~~l~~~l~~~~~------------------~~~~Wr~~f~~~~i~~~l~~~~~-~~lpESp~~l~~~~~~~~a~ 156 (434)
...++|..+++.+...+. +..+||...++-.++.++..+.. +.++|.|. .|.+.
T Consensus 170 g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~---- 242 (462)
T PRK15034 170 GLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI---- 242 (462)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH----
Confidence 666666655544432211 13358888887776666554443 33433221 00000
Q ss_pred HHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHH
Q 013910 157 NILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNS 236 (434)
Q Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 236 (434)
+ .....+.+++.+ ++..++++..
T Consensus 243 ---~--------------------------------------------------~~~~vlk~~~~W----llslly~~tF 265 (462)
T PRK15034 243 ---A--------------------------------------------------DQLPVLQRLHLW----LLSLLYLATF 265 (462)
T ss_pred ---H--------------------------------------------------HHHHHhCCCchh----HHHHHHHHHH
Confidence 0 001111122222 2333333333
Q ss_pred HHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q 013910 237 FVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL 316 (434)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~ 316 (434)
-.|.++..+.+.+.... ..........++..+.+.++..++|+++||+|+|+.+..+.+...+.....
T Consensus 266 G~fvg~s~~lp~~~~~~------------~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~ 333 (462)
T PRK15034 266 GSFIGFSAGFAMLAKTQ------------FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALL 333 (462)
T ss_pred HHHHHHHHHHHHHHHHH------------cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 33333333333332110 001111222334456677788899999999999998887776555443322
Q ss_pred H--hhh----hhHHHHHHHHHHHHHHhhh-hhhhhhhcccccCC---------------------CchhhHHhHHHHhhh
Q 013910 317 V--TLQ----SNILLTALLSGARMFSMGT-FIIANIFAPEIYPT---------------------SMRSTGAGVAYAVGR 368 (434)
Q Consensus 317 ~--~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~El~P~---------------------~~R~~a~gi~~~~~~ 368 (434)
. ... +-...... +...+...|. ....+-+.+..||+ +.-+.+.|+..+.+.
T Consensus 334 ~l~lp~~~~~~~~~~~~~-~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~ 412 (462)
T PRK15034 334 FLTLPGTGSGNFIAFYAV-FMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGA 412 (462)
T ss_pred HHHhccccccHHHHHHHH-HHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHH
Confidence 2 111 11111111 1111122222 34566677788874 135678899999999
Q ss_pred HhHhhHHHHHHHHhhhcchh-hHHHHHHHHHHHHHHHHHhc
Q 013910 369 IGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 369 ig~~~~p~~~~~l~~~~g~~-~~~~~~~~~~~i~~~~~~~~ 408 (434)
+|+++.|.+++...+.+|.+ ..+..+.+..+++.++.+.+
T Consensus 413 ~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 413 VGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred cccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888776653 45566666666666555543
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.86 E-value=1.3e-18 Score=169.29 Aligned_cols=122 Identities=18% Similarity=0.259 Sum_probs=105.3
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+.||+|||+.+..+..+..++..+..+++++..+++.|++.|++.+... ....++.|+.|+++|++..++.+....+
T Consensus 47 g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (377)
T PRK11102 47 GPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI 126 (377)
T ss_pred chHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999887653 4556788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHhcCCCh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESP 143 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp 143 (434)
|..+++.++..+.+..+||+.|.+.++..++.. +..+++||++
T Consensus 127 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 127 APLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999988887777899999998877766654 3455677764
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.86 E-value=1.2e-19 Score=180.84 Aligned_cols=335 Identities=12% Similarity=0.077 Sum_probs=186.9
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHH-HHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLI-LRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~-~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
+..++.||+|||+.++.+.++..++.+++++++++..+++ .|++.|++.|.. .....++.|+.| ++|++..++.+.+
T Consensus 73 ~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~ 151 (455)
T TIGR00892 73 ISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAG 151 (455)
T ss_pred HHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhc
Confidence 3457999999999999999999999999999999998875 579999998864 344456678885 7899999999999
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHh-cCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCcc
Q 013910 98 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 176 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~-lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 176 (434)
..+|..+++.+...+.+..+||+.|++.++..++..+..++ .|+.+... +.+.++ + + +.+
T Consensus 152 ~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~-~---------~--~~~----- 212 (455)
T TIGR00892 152 SPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQR--VSKSKS-K---------E--GLP----- 212 (455)
T ss_pred ccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccc--cccccc-c---------c--cCC-----
Confidence 99999999988887777889999999998877655444333 33322100 000000 0 0 000
Q ss_pred CCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 177 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
++...+..+. +...+. ..+...+..+.+++++. .....+...+.++....+.+.+....
T Consensus 213 -------~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~~~--- 271 (455)
T TIGR00892 213 -------PDGSTKKLSK------KSTAEK-INRFLDFSLFTHRGFLV----YLSGNVIMFLGFFAPIIFLVPYAKDK--- 271 (455)
T ss_pred -------CCCccccccc------cchhhh-hhhhcchHHhcCchHHH----HHHHHHHHHHHccchHHHHHHHHHHc---
Confidence 0000000000 000000 00011112122232221 11111112222222222222222111
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhh--chhHHHHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV--GRKLSMTI--MFIFVCIFLLPLVTLQSNILLTALLSGA 332 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~--gRR~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
+...........+.++..+++..++++++||. ++|+.... +.+..++..+......+.+.........
T Consensus 272 --------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~ 343 (455)
T TIGR00892 272 --------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFF 343 (455)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 01111112223344566777888899999973 33433322 2222222222222222222211111111
Q ss_pred HHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHH
Q 013910 333 RMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVV 403 (434)
Q Consensus 333 ~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g-~~~~~~~~~~~~~i~~~ 403 (434)
.+......+..+.+..|.+|++.++++.|+.+....+|++++|.+.+.+.+..+ ....+.+.+++.+++++
T Consensus 344 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 344 GLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 112222345567778899999999999999999999999999999998877654 33445555554444444
No 60
>PRK11043 putative transporter; Provisional
Probab=99.85 E-value=4.8e-18 Score=166.82 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=104.0
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
...+.||+|||+.+..+..+..++.++.++++++..+++.|+++|++.+... ....++.|+.|+++|++..+.......
T Consensus 61 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (401)
T PRK11043 61 WGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVA 140 (401)
T ss_pred hhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999877643 334567899999999999888888888
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCCh
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESP 143 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp 143 (434)
+|..+++.++..+.+..+||+.|.+.++..++..+..++++|++
T Consensus 141 ~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 141 LSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 89999998888887888999999998887777666555666554
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.85 E-value=1.6e-18 Score=169.50 Aligned_cols=318 Identities=11% Similarity=0.028 Sum_probs=185.7
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+.||+|||+++..+..++.+++++.+++++. ++.|+++|++.+.. ++..+++.|+.|+++|+++.++.+....+|
T Consensus 60 ~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~ 136 (393)
T PRK11195 60 AFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAA 136 (393)
T ss_pred HhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999888877776664 78999999998775 455678899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTN 181 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
.++++.++..+.+. .|+..+.+.+...++..+....+||+|.... ++.++..+.++..
T Consensus 137 ~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~------------------- 194 (393)
T PRK11195 137 ILLGTVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRP--GQSWNPIALLRDF------------------- 194 (393)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCccccc--ccCCCHHHHHHHH-------------------
Confidence 99999998887653 4888777766555544555667888764210 0000000000000
Q ss_pred CCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 013910 182 DLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL-LWVLYFGNSFVYYGIVLLASELSGSQSKCSSSI 260 (434)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (434)
. ...+.+++.+..+.... ....+.......+....+.+...+
T Consensus 195 ------------------~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg--------- 237 (393)
T PRK11195 195 ------------------F----------HACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG--------- 237 (393)
T ss_pred ------------------H----------HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------
Confidence 0 00112222222222222 222222222222333233322211
Q ss_pred ccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhh
Q 013910 261 LLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTF 340 (434)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
.+............++.++|.++.+.+.||.++|+.+..+..+ ++....+....+.+..........++.....
T Consensus 238 -----~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~ 311 (393)
T PRK11195 238 -----ITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFV 311 (393)
T ss_pred -----CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhh
Confidence 1111112223444567778888888888888888777666433 2222222222222211111111111111112
Q ss_pred hhhhhhcccccCCCc-hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 341 IIANIFAPEIYPTSM-RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 341 ~~~~~~~~El~P~~~-R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
........|..|++. ++++.++.+....++..++..+... .+..+-...+++.+...+++....+.+.
T Consensus 312 ~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 312 VPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSL-LVKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred hhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 334445567776665 7999999999999998888877764 4555555455555555555555555554
No 62
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=8.7e-19 Score=163.99 Aligned_cols=315 Identities=19% Similarity=0.186 Sum_probs=203.7
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHH---HHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYI---SLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~---~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.++||+|-|+...++.++..+..+..+++.++. ++++.+++.|++-|...+..++.++++|||++|.+.+++. .-+
T Consensus 71 ~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN 149 (417)
T COG2223 71 FLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGN 149 (417)
T ss_pred hhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-ccc
Confidence 589999999999999999999999998886555 9999999999997766677778899999999999999998 777
Q ss_pred HHHHHHHHHHHHHhcccc---hHHHHHHHHHHHHHH-HHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCc
Q 013910 100 FGSVSEAALAWIVMPILT---WRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNL 175 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~---Wr~~f~~~~i~~~l~-~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~ 175 (434)
+|..+...++-.+....+ ||....+-.++.++. +..++.+.|.|+...+++....
T Consensus 150 ~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--------------------- 208 (417)
T COG2223 150 LGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--------------------- 208 (417)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------------
Confidence 888777776666655556 999888887777765 4455667676653111000000
Q ss_pred cCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 013910 176 TSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 255 (434)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
.+++..++. +++..+...|+.+.-.+-++..+.+.+..+.-
T Consensus 209 -----------------------------------~~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~f- 249 (417)
T COG2223 209 -----------------------------------AQLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQF- 249 (417)
T ss_pred -----------------------------------hHHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 011112211 11223444554444444444444444432211
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-------hhHHHHHH
Q 013910 256 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-------SNILLTAL 328 (434)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 328 (434)
+.+....-...+...+.+.....++|+++||+|.|+.....+..++++........ +.......
T Consensus 250 ---------g~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 320 (417)
T COG2223 250 ---------GLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAV 320 (417)
T ss_pred ---------CCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHH
Confidence 11111111222333344555667799999999988887776666665554443321 11222222
Q ss_pred HHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHh
Q 013910 329 LSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~-~~~~~~~~~~~~i~~~~~~~ 407 (434)
.+....+........+-+.+.++|.+ -+...|+..++|.+|++.-|..++...+.+|. ...+.++..+.+++.++.+.
T Consensus 321 ~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 321 FLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222223455677788888774 57889999999999999999999998888874 45666777777777665554
Q ss_pred c
Q 013910 408 I 408 (434)
Q Consensus 408 ~ 408 (434)
.
T Consensus 400 ~ 400 (417)
T COG2223 400 L 400 (417)
T ss_pred H
Confidence 4
No 63
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.84 E-value=5.3e-18 Score=165.33 Aligned_cols=307 Identities=16% Similarity=0.110 Sum_probs=179.0
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+.+.||+|||+.+..+.++..++.++.++++|+..++++|+++|++.+... +...++.+..|+++||+..+.++.+..
T Consensus 61 ~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (381)
T PRK03633 61 AGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYY 140 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3469999999999999999999999999999999999999999999987653 334556788899999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH-hcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
+|..+++.+...+.+...|...+.. ...........+ ..+|++.
T Consensus 141 ~g~~~g~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------------------------- 185 (381)
T PRK03633 141 LGTVLGQLLVSKVSTELMSVLPWVT-GLVLAAILPLLFTRILNQQA---------------------------------- 185 (381)
T ss_pred HHHHHHHHHHhcccccccchHHHHH-HHHHHHHHHHHHhcccCCCC----------------------------------
Confidence 9999999988776544323222222 111111111111 1111100
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
+ ++ . .. + ....+.+++.+. ......... +.+.....+.+.+....
T Consensus 186 ---~-~~----~-~~---------------~--~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~lp~~~~~~----- 230 (381)
T PRK03633 186 ---E-NH----D-ST---------------S--IWPMLKLRQARL-GVNGCIISG---IVLGSLYGLMPLYLNHQ----- 230 (381)
T ss_pred ---C-CC----C-CC---------------C--HHHHHHhcchHH-HHHHHHHHH---HHHHHHHHHHHHHHHHc-----
Confidence 0 00 0 00 0 000011122221 111111111 11111111122221110
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMG 338 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
+.+............+..+++.+..+++.||+|||+.+..+..+..+....+.. ..... ......+ .....
T Consensus 231 ------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~~~l~g-~~~~~ 301 (381)
T PRK03633 231 ------GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS-QAAMA-PALFILG-AAGFT 301 (381)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh-hHHHH-HHHHHHH-HHHHh
Confidence 111111112223444677889999999999999999887665555443332221 11111 1111111 11123
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 406 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 406 (434)
..+.......|..|++.++.+.+..+....+|+.++|.+.+.+.|..+....+.+.+.+.++..+..+
T Consensus 302 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 302 LYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 34556667789998887777788877778899999999999988877766666666666655544433
No 64
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.84 E-value=5.9e-19 Score=170.88 Aligned_cols=124 Identities=18% Similarity=0.241 Sum_probs=95.9
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~-~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
...+.||+|||+.+..+.++..++.++.++++ ++..+++.|+++|++.+.......++.|+.|+++|++..++......
T Consensus 57 ~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 136 (366)
T TIGR00886 57 LGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGN 136 (366)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhH
Confidence 34699999999999999999999999999999 99999999999999855444455678899999999999999987777
Q ss_pred HHHHHHHHHHHHHhc----------ccchHHHH-HHHHHHHHH-HHHHHHhcCCChh
Q 013910 100 FGSVSEAALAWIVMP----------ILTWRWLL-ALSAIPAFV-LLIFIVFMPESPR 144 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~----------~~~Wr~~f-~~~~i~~~l-~~~~~~~lpESp~ 144 (434)
+|..+++.++..+.. ..+||+.| ...++...+ ..+.....+|+|+
T Consensus 137 ~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 137 MGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 777777666544322 34899999 443444333 3444555677764
No 65
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=2.5e-18 Score=190.68 Aligned_cols=327 Identities=14% Similarity=0.015 Sum_probs=186.3
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHH---hhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~---~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
..+.||+|||++++.+.++.+++.++. ..++++..++++|+++|++.+... +...++.|++|+++|+++.++.+.+
T Consensus 68 G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 147 (1146)
T PRK08633 68 GFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAF 147 (1146)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHH
Confidence 358999999999999887766655443 345789999999999999988754 5567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcc---------cchHHHHHHHHHHH-HHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcC
Q 013910 98 WTFGSVSEAALAWIVMPI---------LTWRWLLALSAIPA-FVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQ 167 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~---------~~Wr~~f~~~~i~~-~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~ 167 (434)
..+|.++++.++.++... .+|++.+.+..+.. ++.++..+.+||+|.+...++
T Consensus 148 ~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 210 (1146)
T PRK08633 148 TIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF----------------- 210 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-----------------
Confidence 999999999998877654 24555555444333 333444566788875311000
Q ss_pred CCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHH-HHHHHHHHHHH-HHHHHHH
Q 013910 168 TSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL-LWVLYFGNSFV-YYGIVLL 245 (434)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~-~~~~~~~ 245 (434)
+. . +... . +.....+..+++.+......+ ....++..... .+...++
T Consensus 211 -----------------~~-~--~~~~-----~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (1146)
T PRK08633 211 -----------------DK-K--KYLF-----P------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYA 259 (1146)
T ss_pred -----------------cc-c--cccc-----H------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 00 0 0000 0 000012223333333222222 12222211111 1111111
Q ss_pred HHhhhcccCCCCcccccccCccch-hHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHH
Q 013910 246 ASELSGSQSKCSSSILLSENVQDA-SVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL 324 (434)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (434)
...+. .+.. ..........++.++|.++++++.||.++|+.+.++.++.++.++.+....+.+.
T Consensus 260 ~~~~g---------------~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (1146)
T PRK08633 260 KEVLG---------------LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLAS 324 (1146)
T ss_pred HHHhC---------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHH
Confidence 11111 1111 1122233445667888999999999999888777666555544443333222222
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhc-chhhHHHHHHHHHHHHHH
Q 013910 325 LTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLSVV 403 (434)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~-g~~~~~~~~~~~~~i~~~ 403 (434)
..+..+...++..........+..|..|++.|++++|+.+.+..+++++++.+...+.... +....+++.+.++++..+
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 404 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTL 404 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 2121111112222234456778889999999999999999999988877776655433211 122233344444444444
Q ss_pred HHHhcccc
Q 013910 404 VILLIPFE 411 (434)
Q Consensus 404 ~~~~~~~e 411 (434)
..+...|+
T Consensus 405 ~~~~~~~~ 412 (1146)
T PRK08633 405 YTLLLLPD 412 (1146)
T ss_pred HHHHHhHH
Confidence 44333343
No 66
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4.9e-19 Score=174.10 Aligned_cols=331 Identities=19% Similarity=0.283 Sum_probs=203.2
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSP--NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+.||+|-|+++..+.+++++.++++-.+. ++..+++.|+++|++.|... +.....+.|+|++||++..++...+..
T Consensus 95 ~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q 174 (466)
T KOG2532|consen 95 YLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQ 174 (466)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999986654 45588999999999999864 555677899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHH-hcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 100 FGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIV-FMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~-~~Wr~~f~~~~i~~~l~~~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
+|.+++.++++.+.+. .||++.|++.++.+++..++++ +.-|+|+- +.+..+. .++++.+...
T Consensus 175 ~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~---h~~is~~--El~~I~~~k~---------- 239 (466)
T KOG2532|consen 175 LGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK---HPNISEK--ELKYIEKGKS---------- 239 (466)
T ss_pred HHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc---CCCCCHH--HHHHHHhccc----------
Confidence 9999999998888776 8999999999999998866654 46688862 1111111 1222211000
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
++ +.++..+ .+++.+++ +..+ ..+...++....++.+..+.|.+..+-
T Consensus 240 ------~~---------------~~~~~~~---vP~~~i~ts~~vw----ai~~~~f~~~~~~~~l~~y~PtY~~~V--- 288 (466)
T KOG2532|consen 240 ------EA---------------HVKKKPP---VPYKAILTSPPVW----AIWISAFGGNWGFYLLLTYLPTYLKEV--- 288 (466)
T ss_pred ------cc---------------ccCCCCC---CCHHHHHcCHHHH----HHHHHHHHHHHHHHHHHHHhhHHHHHH---
Confidence 00 0000001 12333332 3322 233444444444444444444433210
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchh--------HHH-HHHHHHHHHHHHHHHhhh--hhHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK--------LSM-TIMFIFVCIFLLPLVTLQ--SNILL 325 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR--------~~~-~~~~~~~~~~~~~~~~~~--~~~~~ 325 (434)
+..+. ........+..+.+.+..+++|.++||+.+| +.+ .++....+++++.+.+.. +.+..
T Consensus 289 -----L~f~v--~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a 361 (466)
T KOG2532|consen 289 -----LGFDV--RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLA 361 (466)
T ss_pred -----hCCCh--hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHH
Confidence 00011 1112233455667778889999999998663 222 344555555555554433 22223
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccc-CCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh-hc--chhhHHHHHHHHHHHH
Q 013910 326 TALLSGARMFSMGTFIIANIFAPEIY-PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT-SC--HQTAAILLLEALIVLS 401 (434)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~El~-P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~-~~--g~~~~~~~~~~~~~i~ 401 (434)
..++..+. ...|.. ....+.+-.- -++.-+..+|+++.++.+.++++|.+.+.+.. .+ .....+++.+++.+++
T Consensus 362 ~~~l~~~~-~~~g~~-~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~ 439 (466)
T KOG2532|consen 362 VILLTIAI-GLSGFN-ISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVG 439 (466)
T ss_pred HHHHHHHH-HHcccc-hhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 22222221 122222 2222222222 56678999999999999999999999987773 21 1234556666666666
Q ss_pred HHHHHhc
Q 013910 402 VVVILLI 408 (434)
Q Consensus 402 ~~~~~~~ 408 (434)
.++..++
T Consensus 440 ~i~f~~f 446 (466)
T KOG2532|consen 440 NIIFLFF 446 (466)
T ss_pred chheeEe
Confidence 6444444
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.83 E-value=1.2e-17 Score=163.69 Aligned_cols=119 Identities=16% Similarity=0.087 Sum_probs=101.2
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+.||+|||+.+..+.++..++.++..+++++..+++.|+++|++.+.. +....++.|++|+++||+..++.+....+
T Consensus 67 G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 146 (400)
T PRK11646 67 GAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA 146 (400)
T ss_pred hHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999987654 34456788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPE 141 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpE 141 (434)
|..+++.++..+. ..+||+.|++.++..++..+ ..+.+||
T Consensus 147 g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 147 GAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999988877 67999999988776665433 3344555
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=1.6e-17 Score=163.20 Aligned_cols=292 Identities=15% Similarity=0.139 Sum_probs=182.9
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhh---cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAF---SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFST 96 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~---~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~ 96 (434)
.+++.||+|||+++..+..+++++.++... .+|+..+++.|++.|+|.|... ...+++.|..|+++|++..++.+.
T Consensus 58 ~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (410)
T TIGR00885 58 AAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQS 137 (410)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHH
Confidence 447999999999999999999998877543 4689999999999999998764 456688899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc--------------------------ccchHHHHHHHHHHHHHHHHHHHh--cCCChhHHhh
Q 013910 97 FWTFGSVSEAALAWIVMP--------------------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCT 148 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~--------------------------~~~Wr~~f~~~~i~~~l~~~~~~~--lpESp~~l~~ 148 (434)
...+|..+++.+...+.. ..+||++|.+.++..++..+...+ +||.++
T Consensus 138 ~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~---- 213 (410)
T TIGR00885 138 FNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH---- 213 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----
Confidence 999999999988765421 136999999887766655443322 333211
Q ss_pred cCChHHHHHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHH
Q 013910 149 KGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILL 228 (434)
Q Consensus 149 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (434)
++ + ++ .+.. ...+..++++......+.
T Consensus 214 ----~~---------------------------~-~~--~~~~-------------------~~~~~~~~~~~~~~~~l~ 240 (410)
T TIGR00885 214 ----SD---------------------------A-KQ--ISFS-------------------ASLSRLARIRHYREGVIA 240 (410)
T ss_pred ----cc---------------------------c-cc--ccch-------------------hhHHHHHhChhHHHHHHH
Confidence 00 0 00 0000 000011111111112222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHH
Q 013910 229 WVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIF 308 (434)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~ 308 (434)
.+.+.+.....+ .+.+.+..... . .........+.... .....+|.++++++.||+++|+.+.++...
T Consensus 241 ~f~yvg~e~~~~---s~l~~y~~~~~--~-----~~~~~~a~~~~~~~--~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~ 308 (410)
T TIGR00885 241 QFFYVGVQIMCW---TFIIQYAVRLI--P-----GMTAGFAANYNIGA--MVIFFISRFIGTWLISYLAAHKVLMAYAII 308 (410)
T ss_pred HHHHHHHHHHHH---HHHHHHHhhcc--C-----CCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 222332222222 11111111000 0 00001111122222 244578999999999999999988887777
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 309 VCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
+.+..+......+... ...+....++....++..+....+..+++.+..+.+++.++ +|+.+.|.+.+.+.|.
T Consensus 309 ~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 309 GMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 6665554444332222 22222333455566788999999999998887777777766 9999999999999884
No 69
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.83 E-value=2.4e-17 Score=162.30 Aligned_cols=123 Identities=18% Similarity=0.209 Sum_probs=106.3
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..++||+|||+.+..+..++.++++++++++|+..++++|+++|++.+... ....+..|+.|+++|++..+.......+
T Consensus 72 G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (413)
T PRK15403 72 GPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV 151 (413)
T ss_pred hHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999886543 3445678999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCChh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPESPR 144 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~ 144 (434)
|..+++.++..+.+..+||+.|++.++..++..+. .+.+||+++
T Consensus 152 ~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 152 APIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999888877789999999988877766543 456788753
No 70
>PRK10133 L-fucose transporter; Provisional
Probab=99.82 E-value=2.5e-17 Score=163.13 Aligned_cols=305 Identities=14% Similarity=0.081 Sum_probs=174.9
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHH---hhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLS---AFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFST 96 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~---~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~ 96 (434)
...+.||+|||+++..+..++.++.++. .+++|+..++++|+++|+|.|... ....++.|+.|+++|+...+..+.
T Consensus 81 ~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~ 160 (438)
T PRK10133 81 AGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQT 160 (438)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHH
Confidence 3468999999999999999999999775 568999999999999999998764 445677788777777778899999
Q ss_pred HHHHHHHHHHHHHHHHh-c-----------------c--------cchHHHHHH-HHHHHHHHHHH-HHhcCCChhHHhh
Q 013910 97 FWTFGSVSEAALAWIVM-P-----------------I--------LTWRWLLAL-SAIPAFVLLIF-IVFMPESPRYLCT 148 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~-~-----------------~--------~~Wr~~f~~-~~i~~~l~~~~-~~~lpESp~~l~~ 148 (434)
.+.+|..+++.++..+. . . .+||++|.. ..+..++.++. ...+||.|.
T Consensus 161 ~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~---- 236 (438)
T PRK10133 161 FNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS---- 236 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----
Confidence 99999999988765432 0 0 256666654 33333332222 233444211
Q ss_pred cCChHHHHHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHH
Q 013910 149 KGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTIL 227 (434)
Q Consensus 149 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i 227 (434)
++. ++ ++ ..+ ..+..+.++ +++.+... +
T Consensus 237 -~~~-------------------------------~~--~~--~~~--------------~~~~~~~ll~~~~~~~~~-l 265 (438)
T PRK10133 237 -DNH-------------------------------SD--AK--QGS--------------FSASLSRLARIRHWRWAV-L 265 (438)
T ss_pred -ccc-------------------------------cc--cc--ccc--------------hhhhHHHHHhCchHHHHH-H
Confidence 000 00 00 000 000111122 22322222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHH
Q 013910 228 LWVLYFGNSFVYYGIVLLASEL-SGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMF 306 (434)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~ 306 (434)
....+.. ..++...+.+.+ ..+. .+.+............++.++|..+++++.||+|||+.+..+.
T Consensus 266 ~~~~~~~---~~~~~~~~~~~~l~~~~----------~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~ 332 (438)
T PRK10133 266 AQFCYVG---AQTACWSYLIRYAVEEI----------PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYA 332 (438)
T ss_pred HHHHHHH---HHHHHHHHHHHHHhhhc----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 1111111 111111111111 1100 0111122222334455677899999999999999999887776
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 307 IFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
.+....+......... ..........++....++..+....|.+|.+ .+++.++.. +..+|+.+.|.+.+.+.|..|
T Consensus 333 ~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 333 LIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred HHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhcc
Confidence 5555443333222221 1122222233344455778888888988875 566777665 455677888888888777665
Q ss_pred -hhhHHHHHHH
Q 013910 387 -QTAAILLLEA 396 (434)
Q Consensus 387 -~~~~~~~~~~ 396 (434)
....+++...
T Consensus 410 ~~~~~~~v~~~ 420 (438)
T PRK10133 410 NIPTAELIPAL 420 (438)
T ss_pred chHHHHHHHHH
Confidence 3445544333
No 71
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.82 E-value=7.9e-19 Score=173.08 Aligned_cols=122 Identities=22% Similarity=0.301 Sum_probs=108.8
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+.||+.-.+.+....+.+++.++++...+|++.+++.|++.|+..++.. ....++.-|+.+++||..++++..+..+|
T Consensus 103 ~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g 182 (495)
T KOG2533|consen 103 LLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLG 182 (495)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchh
Confidence 58899998888999999999999999889999999999999999999875 45567889999999999999999999999
Q ss_pred HHHHHHHHHHH------hcccchHHHHHHHHHHHHHHHH-HHHhcCCChh
Q 013910 102 SVSEAALAWIV------MPILTWRWLLALSAIPAFVLLI-FIVFMPESPR 144 (434)
Q Consensus 102 ~~l~~~l~~~~------~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~ 144 (434)
.++|+++++.+ ....||||.|++.++.+++..+ ..+++|++|.
T Consensus 183 ~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 183 NIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999886 3457999999999998888755 4567999998
No 72
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.82 E-value=8e-17 Score=158.20 Aligned_cols=318 Identities=15% Similarity=0.083 Sum_probs=179.1
Q ss_pred hhHhhh-----cchH-HHHHHHHHHHHHHHHHhhc---ccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHH
Q 013910 23 LYFIFA-----FSRM-SILGGALVTFVAGLLSAFS---PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMV 92 (434)
Q Consensus 23 ~~~~~~-----GRr~-~l~~~~~~~~i~~~~~~~~---~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~ 92 (434)
.+.||+ |||+ .+..+.....++....++. .++..+++..++.|+..+.. .+..++..|+.|+++|++..+
T Consensus 54 ~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~ 133 (402)
T PRK11902 54 PLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAA 133 (402)
T ss_pred HHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHH
Confidence 479999 8886 5777777777777666666 35677788877777655443 345677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCC
Q 013910 93 VFSTFWTFGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 171 (434)
Q Consensus 93 ~~~~~~~~G~~l~~~l~~~~~~~-~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 171 (434)
+...++.+|.++++.++..+.+. .+||..|++.++..++..+..+++||+++.. ++.++..
T Consensus 134 ~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~---~~~~~~~--------------- 195 (402)
T PRK11902 134 VKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA---RPPRSLG--------------- 195 (402)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cccchhH---------------
Confidence 99999999999999888777664 5999999998887666555556678765410 0000000
Q ss_pred CCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q 013910 172 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVL-YFGNSFVYYGIVLLASELS 250 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~ 250 (434)
++ ....++.+++++..+........ ...+.. ++.. ..+.+.
T Consensus 196 ---------------------~~--------------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~-~~~~--~~~~l~ 237 (402)
T PRK11902 196 ---------------------EA--------------VVGPLRDFFSRRGAWALLLLIVLYKLGDAF-AGSL--STTFLI 237 (402)
T ss_pred ---------------------HH--------------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHH-HHHH--HHHHHH
Confidence 00 00012223333322222222222 111111 1111 111111
Q ss_pred cccCCCCcccccccCccchhHHHH-HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH---Hhhhhh-HHH
Q 013910 251 GSQSKCSSSILLSENVQDASVYIN-VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL---VTLQSN-ILL 325 (434)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~---~~~~~~-~~~ 325 (434)
.. .+.+....... ........++|..+++++.||+|||+.+..+.....+..+.+ ....++ +..
T Consensus 238 ~~-----------~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~ 306 (402)
T PRK11902 238 RG-----------AGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTM 306 (402)
T ss_pred Hh-----------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 10 01111111111 112234578899999999999999988766555444332221 121122 222
Q ss_pred HHHHHHHHHH----HhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 013910 326 TALLSGARMF----SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 401 (434)
Q Consensus 326 ~~~~~~~~~~----~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~ 401 (434)
........++ ..........+..+.+|.+ ..++.+++..++++..+.+.+.+.|..|....+.+.+.+++++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 1111111111 1122344455666666644 4455555555666555557788888877666677777777777
Q ss_pred HHHHHhcccc
Q 013910 402 VVVILLIPFE 411 (434)
Q Consensus 402 ~~~~~~~~~e 411 (434)
.++.+...++
T Consensus 383 ~~~~~~~~~~ 392 (402)
T PRK11902 383 LALLWLMRGT 392 (402)
T ss_pred HHHHHHHhhh
Confidence 6666555433
No 73
>PRK10054 putative transporter; Provisional
Probab=99.82 E-value=1.4e-17 Score=163.06 Aligned_cols=313 Identities=12% Similarity=0.081 Sum_probs=184.0
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+.||+|||+.+.++.....++.++.++++|+..++++|++.|.+.+.. .+...++.|..|+++|++..++.....++
T Consensus 64 G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l 143 (395)
T PRK10054 64 GILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI 143 (395)
T ss_pred HHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH
Confidence 46999999999999999988888888899999999999999988765543 34567889999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
|..+++.++..+.. .+||..|.+.++..++..+ ..+++||+++ +++.++
T Consensus 144 g~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~----~~~~~~------------------------- 193 (395)
T PRK10054 144 GWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK----AIATET------------------------- 193 (395)
T ss_pred HHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc----ccccch-------------------------
Confidence 99999998887654 6899999988777666543 3344565432 000000
Q ss_pred CCCCcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
++ . . +.+..+ +++.+.-........+...........+......
T Consensus 194 ----~~------~-------~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------- 238 (395)
T PRK10054 194 ----GS------V-------W-----------SPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVAD------- 238 (395)
T ss_pred ----hh------h-------h-----------hhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcc-------
Confidence 00 0 0 000011 1222111111111111111000001111111100
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLT-ALLSGARMFSM 337 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 337 (434)
.+.................++.....+.+.||.++|+.+..+..+..+....+....++.... ...........
T Consensus 239 -----~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 313 (395)
T PRK10054 239 -----SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEI 313 (395)
T ss_pred -----cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHH
Confidence 001111111112222233445556677889999999988777655554443333222222111 11111111111
Q ss_pred hhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 013910 338 GTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 405 (434)
Q Consensus 338 ~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 405 (434)
...+.......+..|++.|+++.+.. +.+++|..++|.+.+.+.|..+....+.+++.+..++.++.
T Consensus 314 ~~~p~~~~~~~~~~p~~~~~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 314 IYAPGEYMLIDHIAPPGMKASYFSAQ-SLGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHhhHHHHHHHhCCcccceehHhHH-HHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 22345566788999999999998865 46779999999999999998765555555544444443333
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.81 E-value=1.4e-17 Score=160.84 Aligned_cols=283 Identities=11% Similarity=0.081 Sum_probs=164.8
Q ss_pred hhhHhhh-----cchHHH-HHHHHHHHHHHHHHhhcc---cHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHH
Q 013910 22 PLYFIFA-----FSRMSI-LGGALVTFVAGLLSAFSP---NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWM 91 (434)
Q Consensus 22 ~~~~~~~-----GRr~~l-~~~~~~~~i~~~~~~~~~---~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~ 91 (434)
..+.||+ |||+.+ +.+.+...++....++.+ +...+....++.|.+.+.. .+...++.|++|+|+|+++.
T Consensus 42 g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~ 121 (356)
T TIGR00901 42 SPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGS 121 (356)
T ss_pred HHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHH
Confidence 3578997 999975 566666667766677774 4555666666776655443 34456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc--------hHHHHHHHHHHHHHHHHHHHh-cCCChhHHhhcCChHHHHHHHHHH
Q 013910 92 VVFSTFWTFGSVSEAALAWIVMPILT--------WRWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKI 162 (434)
Q Consensus 92 ~~~~~~~~~G~~l~~~l~~~~~~~~~--------Wr~~f~~~~i~~~l~~~~~~~-lpESp~~l~~~~~~~~a~~~l~~~ 162 (434)
++...+..+|.++++.++..+.+..+ ||..|++.++..++..+..++ .||+++. +.+.++..+
T Consensus 122 ~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~----- 193 (356)
T TIGR00901 122 TIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED---ASVPKPLTQ----- 193 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccchhHHH-----
Confidence 99999999999999999887766666 999999998877776555443 5664320 000000000
Q ss_pred HHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHH
Q 013910 163 AQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGI 242 (434)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (434)
+ .+ ..++.+++.+..++........+.....++..
T Consensus 194 -----------------------------------~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T TIGR00901 194 -----------------------------------A-------VL---KPIREFFQRKNMIQALLLLLLIVLYKLGDSAA 228 (356)
T ss_pred -----------------------------------H-------HH---HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 0 00 01112222221111222222222223333333
Q ss_pred HHHHHhhhcccCCCCcccccccCccchhH-HHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--
Q 013910 243 VLLASELSGSQSKCSSSILLSENVQDASV-YINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-- 319 (434)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~-- 319 (434)
..+.+.+..+. +.+.... ........+..++|.++++++.||+|||+.+..+.++..+........
T Consensus 229 ~~~~~~~l~~~-----------g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~ 297 (356)
T TIGR00901 229 TVLTTLFLLDM-----------GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLAS 297 (356)
T ss_pred HHHHHHHHHHc-----------CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222221110 1111111 112222334567899999999999999988877766655543322221
Q ss_pred h--------hh-HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhh
Q 013910 320 Q--------SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGR 368 (434)
Q Consensus 320 ~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ 368 (434)
. +. +..........++.....+....+..|.+|++.|++.+|+.++..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 298 NGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1 11 2111112122222334466778899999999999999999887654
No 75
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.80 E-value=2.6e-16 Score=154.19 Aligned_cols=123 Identities=14% Similarity=0.133 Sum_probs=103.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchh-hhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
+...||+|||+.+..+.....++.++..+++|+..+++.|++.|++.+...+ ...+..|..++++|++..+..+.+..+
T Consensus 64 G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (394)
T PRK11652 64 GPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV 143 (394)
T ss_pred hhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999998876433 344567889999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHhcCCChh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESPR 144 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp~ 144 (434)
|..+++.++..+.+..+||+.|.+.++..++.. +..+++||+|+
T Consensus 144 ~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 144 SPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999988888777899999999877666543 34556788653
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.80 E-value=2.5e-17 Score=182.30 Aligned_cols=298 Identities=9% Similarity=-0.074 Sum_probs=173.1
Q ss_pred hhHhhhcchHHHHH---HHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILG---GALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 23 ~~~~~~GRr~~l~~---~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
.+.||+|||+++.. ..+......+.....+|+++++++|+++|++.+.. ++..+++.|++|+++|+++.++.+.+.
T Consensus 74 ~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~ 153 (1140)
T PRK06814 74 QLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGT 153 (1140)
T ss_pred hhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHH
Confidence 58999999997643 22222222333334589999999999999998765 456678899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCC
Q 013910 99 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSD 178 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~ 178 (434)
.+|.+++++++.++....+||+.|+...+..++.++..+++||++.- .+++
T Consensus 154 ~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------------------- 204 (1140)
T PRK06814 154 FIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDL--------------------------- 204 (1140)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCC---------------------------
Confidence 99999999999998888899999966555555555556667765420 0000
Q ss_pred CCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 013910 179 GTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTIL-LWVLYFGNSFVYYGIVLLASELSGSQSKCS 257 (434)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
+. +. .... +....++..++.+......+ ....++. ++++..+.+.+....
T Consensus 205 -----~~-----~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~---- 255 (1140)
T PRK06814 205 -----KI-----DR-NIIR----------STITLLKYAKADKRIWLAILGISWFWLV----GAVVLSQLPLLAKET---- 255 (1140)
T ss_pred -----ee-----cc-chHH----------HHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHHHHHhHHHHHHH----
Confidence 00 00 0000 00011222222222222212 1111111 112212222221100
Q ss_pred cccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh------------------
Q 013910 258 SSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL------------------ 319 (434)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~------------------ 319 (434)
.+..............++.++|.++.++++|+.++++.+..+.++.++..+.+...
T Consensus 256 ------~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 329 (1140)
T PRK06814 256 ------LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFL 329 (1140)
T ss_pred ------cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhh
Confidence 00111111222334456778899999999988776655444433333322211110
Q ss_pred --hhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 320 --QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 320 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
.+.+......+...++..........+..+..|++.|++++|+.+.++.++..+++.+.+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 330 SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11121111111111222223345677889999999999999999999999998999888776643
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=9.4e-17 Score=154.99 Aligned_cols=291 Identities=18% Similarity=0.178 Sum_probs=169.9
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+++.||+|||+.+..+.+...++.++. .+++...+++.|++.|+|.+... ....+..|+.| ++|+++.+..+.+..
T Consensus 55 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 132 (355)
T TIGR00896 55 APWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALM 132 (355)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHH
Confidence 3468999999999999998888877776 77899999999999999987643 33345668775 689999999999999
Q ss_pred HHHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 100 FGSVSEAALAWIVMPIL--TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~--~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
+|..+++.+...+.+.. +||+.|...++..++.. ..++||+++ +.+ ++
T Consensus 133 ~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~~~~~------~~~------------------~~---- 182 (355)
T TIGR00896 133 GGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAWIPQVRR------RVA------------------AN---- 182 (355)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhhhhcc------ccC------------------CC----
Confidence 99999988877665543 49999887665544322 233454321 000 00
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhcc-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLF-SPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
++. . .. ..+..+ +++.+.. ....+.....+++...+.+.+..+.
T Consensus 183 ------~~~-~---~~------------------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lp~~~~~~--- 227 (355)
T TIGR00896 183 ------QTT-T---RL------------------TPVRIWRSPLAWQV----TVFFGLQSGLYYSLIGWLPAILISH--- 227 (355)
T ss_pred ------CCC-C---CC------------------CCchhhcCHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 000 0 00 000111 1222111 1111222233334333333332111
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMF 335 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
+.+............++.+++.++.+++.||+ +||+.+..+..+..+....+....+........ ...+.
T Consensus 228 --------g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~g~~ 298 (355)
T TIGR00896 228 --------GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWAWAL-VLGLG 298 (355)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-HHHHh
Confidence 11111112233345577889999999999999 556555555444444333332222111111111 11111
Q ss_pred Hhhhhhhhhhhcc-cccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch
Q 013910 336 SMGTFIIANIFAP-EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ 387 (434)
Q Consensus 336 ~~~~~~~~~~~~~-El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~ 387 (434)
....++....... +..+++.++...++.+.++++++.++|.+.+.+.|..|.
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 299 QGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred hhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2222334344444 444567788999999999999999999999988886653
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.79 E-value=2.5e-16 Score=155.22 Aligned_cols=331 Identities=12% Similarity=0.056 Sum_probs=179.2
Q ss_pred hhHhhhcc-hHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hh----hhhhh----hccCCCcchhHHH
Q 013910 23 LYFIFAFS-RMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VF----FSWFM----EFVPPSNRGKWMV 92 (434)
Q Consensus 23 ~~~~~~GR-r~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~----~~~~~----E~~p~~~Rg~~~~ 92 (434)
...||+|| |+.+.++.+.+.++..+..+.+++..+++.|++.|++.+... .. ..+.. |......|.+..+
T Consensus 60 ~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G 139 (418)
T TIGR00889 60 IIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG 139 (418)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh
Confidence 58999965 778888888888888888888999999999999999765432 21 12322 3333344555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCC
Q 013910 93 VFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 172 (434)
Q Consensus 93 ~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 172 (434)
.+|..+++.++..+.....|+. |++.++..++..+..+++||+|+- +++.++
T Consensus 140 ------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~------------------ 191 (418)
T TIGR00889 140 ------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVFALTLPDIPVA---KSTAKM------------------ 191 (418)
T ss_pred ------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHHHhcCCCCCCC---cccccc------------------
Confidence 2456666666555433345665 445555455544555678887630 000000
Q ss_pred CCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 013910 173 GNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGS 252 (434)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (434)
+. + + .. +......+.+++++.-..........+. .++. +....+..
T Consensus 192 -----------~~--~---~-~~-------------~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~- 237 (418)
T TIGR00889 192 -----------SI--K---V-ML-------------GLDAFILFKNKRMAIFFFFSMLLGAPLQ-ITNI--FGNGFLHE- 237 (418)
T ss_pred -----------CH--H---H-Hh-------------hhhHHHHhcCCCeeeHHHHHHHHHhHHH-HHHH--hHHHHHHH-
Confidence 00 0 0 00 0000001111221111111111111111 1111 11111110
Q ss_pred cCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh-h--HH-HHHH
Q 013910 253 QSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-N--IL-LTAL 328 (434)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~ 328 (434)
... .... ..+...........+..+.++++.+..+.++||+|||+.+..+.+..++.......... . .. ....
T Consensus 238 ~g~-~~~~--~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~ 314 (418)
T TIGR00889 238 FGR-NPEF--ADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLS 314 (418)
T ss_pred hcc-cccc--cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHH
Confidence 000 0000 00000011122334455677888999999999999999998887766654433332111 1 11 1111
Q ss_pred HHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHH-HhhhHhHhhHHHHHHHHhhhcc------hhhHHHHHHHHHHHH
Q 013910 329 LSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAY-AVGRIGGMVCPLVAVGLVTSCH------QTAAILLLEALIVLS 401 (434)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~-~~~~ig~~~~p~~~~~l~~~~g------~~~~~~~~~~~~~i~ 401 (434)
............+....+.+|.+|++.|+++.|+.+ ....+|++++|.+.+.+.+..+ ....+.+.+++.+++
T Consensus 315 ~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~ 394 (418)
T TIGR00889 315 MIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAIL 394 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 111111111223445677899999999999999997 4567899999999999888654 234566777777777
Q ss_pred HHHHHhcccccCCcccc
Q 013910 402 VVVILLIPFETKGKELV 418 (434)
Q Consensus 402 ~~~~~~~~~et~~~~~~ 418 (434)
++..+++.+|+++.-..
T Consensus 395 ~~l~~~~~~~~~~~~~~ 411 (418)
T TIGR00889 395 AVLFMIFFKYSHNAIKV 411 (418)
T ss_pred HHHHHHHhCCcccCCCC
Confidence 77777777888766433
No 79
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=6.7e-19 Score=166.03 Aligned_cols=122 Identities=22% Similarity=0.304 Sum_probs=107.6
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+-|||-||+++.++..+|.+++++++++..|+++.++|-++|+|.+.. ++..+.+++.+|..+|+++.++++.+.++|
T Consensus 90 yLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvG 169 (493)
T KOG1330|consen 90 YLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVG 169 (493)
T ss_pred HHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccc
Confidence 4789999999999999999999999999999999999999999999885 566788999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHH-HHHhcCCChh
Q 013910 102 SVSEAALAWIVMPILT-WRWLLALSAIPAFVLLI-FIVFMPESPR 144 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~-Wr~~f~~~~i~~~l~~~-~~~~lpESp~ 144 (434)
..+|.+.+..+.+..+ |||.|...++.+++..+ .+++.+|.+|
T Consensus 170 sglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 170 SGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred cceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9988887776665544 99999999999888755 4556777654
No 80
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.77 E-value=2.7e-16 Score=155.38 Aligned_cols=134 Identities=12% Similarity=0.083 Sum_probs=88.6
Q ss_pred HHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchh
Q 013910 278 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 357 (434)
Q Consensus 278 ~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~ 357 (434)
..+...++.++++++.||+|||+.+..+..+.++......+..+.+......................+.+|.+|++.|+
T Consensus 271 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a 350 (420)
T PRK09528 271 QVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSA 350 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccee
Confidence 34566789999999999999999887776665554444333333332222111111111111233456778999999999
Q ss_pred hHHhH-HHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccc
Q 013910 358 TGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 411 (434)
Q Consensus 358 ~a~gi-~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~e 411 (434)
++.+. .++.+.+|++++|.+.+.+.|..|....+...+++.++..++.++..++
T Consensus 351 ~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 351 TIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98776 4566789999999999999987776667777777777666666655433
No 81
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.77 E-value=8.9e-16 Score=150.46 Aligned_cols=321 Identities=12% Similarity=0.071 Sum_probs=172.7
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHH---hhc-----ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLS---AFS-----PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV 93 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~---~~~-----~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~ 93 (434)
++.||+|||+.++.......+..... .+. +.+..+.+.|++.|++.+... ....+..|..+ +++...+.
T Consensus 60 ~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~ 137 (396)
T TIGR00882 60 LISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGK 137 (396)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccch
Confidence 68999999999988776665443221 122 223456777888998877643 33445555433 33445556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHh-cCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCC
Q 013910 94 FSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVF-MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPS 172 (434)
Q Consensus 94 ~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~-lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~ 172 (434)
.....++|..+++.++..+. ..+||++|++.++..++..+..+. .||+|+. ++..+ +
T Consensus 138 ~~~~~~~g~~~g~~~~g~l~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~------ 195 (396)
T TIGR00882 138 ARMFGCVGWALCASIAGILF-SIDPQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVAN--------A------ 195 (396)
T ss_pred hhhhcccHHHHHHHHHhhhh-ccCchHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhc--------c------
Confidence 66666788888887776554 359999999988877776554444 4554421 00000 0
Q ss_pred CCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHH-HHHHHHHHHHHHHhhh
Q 013910 173 GNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFG-NSFVYYGIVLLASELS 250 (434)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~ 250 (434)
.+. + .++. ..++..+.++ ++.+.-.......... +....+...+......
T Consensus 196 ----------~~~--~-~~~~---------------~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~ 247 (396)
T TIGR00882 196 ----------LGA--N-ASAF---------------SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFA 247 (396)
T ss_pred ----------ccc--c-cCCC---------------CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000 0 0000 0011222222 2222111111111111 0111111111111110
Q ss_pred cccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 013910 251 GSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLS 330 (434)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
. .+...........+..+.+.++....+.+.||+|||+.+.++..+.++.........+.+.......
T Consensus 248 -~-----------~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 315 (396)
T TIGR00882 248 -T-----------PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKM 315 (396)
T ss_pred -c-----------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 0 0001111112223445667778888999999999999888776665554433333333332222111
Q ss_pred HHHHHHhhhhhhhhhhcccccCCCchhhHHhH-HHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 013910 331 GARMFSMGTFIIANIFAPEIYPTSMRSTGAGV-AYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi-~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
....+..........+..|..|++.++++.+. .+....+|++++|.+.+.+.|..|....+.+.+++.++..++..+
T Consensus 316 l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 316 LHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 11111111122334466788999999998877 466788999999999999999877777777777777777666544
No 82
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.75 E-value=7.9e-16 Score=152.80 Aligned_cols=297 Identities=15% Similarity=0.024 Sum_probs=168.5
Q ss_pred hhHhh----hcchH-HHHHHHHHHHHHHHHHhhccc------HHHHHHHHHHHHhcCCCch-hhhhhhhhcc-CCCcchh
Q 013910 23 LYFIF----AFSRM-SILGGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGH-VFFSWFMEFV-PPSNRGK 89 (434)
Q Consensus 23 ~~~~~----~GRr~-~l~~~~~~~~i~~~~~~~~~~------~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~-p~~~Rg~ 89 (434)
.++|| +|||+ .++.+.....++.++..+.++ ...+++.+++.+++.+... ...++..|.+ ++++|++
T Consensus 57 ~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~ 136 (437)
T TIGR00792 57 NIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERES 136 (437)
T ss_pred EeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHH
Confidence 47886 78855 456677777777777766654 4567778888887766533 3345567877 5789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-------cccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHHHH
Q 013910 90 WMVVFSTFWTFGSVSEAALAWIVM-------PILTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNILDK 161 (434)
Q Consensus 90 ~~~~~~~~~~~G~~l~~~l~~~~~-------~~~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l~~ 161 (434)
..++.+.+..+|.++++.+...+. +..+||+.+.+.++.+++..+. .+..||+++. +.
T Consensus 137 ~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~~--------- 202 (437)
T TIGR00792 137 LSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSE-----IP--------- 202 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCC-----CC---------
Confidence 999999888888877766544332 2468999999888877766444 4456665410 00
Q ss_pred HHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHH
Q 013910 162 IAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYG 241 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 241 (434)
. ++ .++.+ ....++.+++.+........ .+.....++.
T Consensus 203 -------------------~--~~----~~~~~--------------~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~ 240 (437)
T TIGR00792 203 -------------------K--NI----EKKLS--------------LKQIFKALFKNDQLLILCLA---YLFYNLAFNI 240 (437)
T ss_pred -------------------c--cc----ccCCC--------------HHHHHHHHhCCHHHHHHHHH---HHHHHHHHHH
Confidence 0 00 00000 00112223332222212111 1111111221
Q ss_pred HHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh
Q 013910 242 IVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS 321 (434)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~ 321 (434)
...+.+.+... . .+.. ........+..+..+++..+.++++||+|||+.+..+..+..+..+......+
T Consensus 241 ~~~~~~~~~~~-------~---~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (437)
T TIGR00792 241 KNGVQVYYFTY-------V---LGDP-ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS 309 (437)
T ss_pred HcchhheeEee-------e---cCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch
Confidence 11111111100 0 0001 11111223345777888999999999999999888776665554443332222
Q ss_pred h-HHHHHHHHHHHHHHhhhhhhhhhhcccccC-------CCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 322 N-ILLTALLSGARMFSMGTFIIANIFAPEIYP-------TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 322 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~P-------~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
+ +..........+......+..+.+.+|..| .+.++++.|+.+.+.++++.+++.+.+.+.+..|
T Consensus 310 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 310 NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 222222122222222334566777788765 5667999999999999999999999998876543
No 83
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.75 E-value=6.7e-15 Score=143.56 Aligned_cols=310 Identities=13% Similarity=0.003 Sum_probs=174.0
Q ss_pred hhHhhhcchHHHHHHHH-HHHHHH-HHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGAL-VTFVAG-LLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~-~~~i~~-~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+.||+|||........ ...+.. .....+++++.+++.|+++|.+.+.. +....+..|+ +++|++..+......+
T Consensus 61 ~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~s 138 (382)
T TIGR00902 61 PLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGS 138 (382)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHH
Confidence 47899998543322221 111222 23446789999999999999877664 3344444454 5788999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDG 179 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 179 (434)
+|.+++++++..+.+..|||..|.+..+..++.. ..+.++|+++ +++.+
T Consensus 139 lG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~~----~~~~~-------------------------- 187 (382)
T TIGR00902 139 AAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTIP----PKDAI-------------------------- 187 (382)
T ss_pred HHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCCC----CCccc--------------------------
Confidence 9999999998888888899999988765433322 2333344321 00000
Q ss_pred CCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q 013910 180 TNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSS 258 (434)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
++ .+.. ..++....++ ++.+.-.....+.... ...++. +.+.+..+.
T Consensus 188 ----~~----~~~~---------------~~~~~~~~l~~~~~~~~l~~~~l~~~~-~~~~~~---~~~~~l~~~----- 235 (382)
T TIGR00902 188 ----PE----DESQ---------------GDSAFIALLKNPMNLRFLAAVCLIQGA-HAAYYG---FSAIYWQAA----- 235 (382)
T ss_pred ----cc----cccc---------------cchhHHHHHcChHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHC-----
Confidence 00 0000 0001112222 2222221111111111 111221 111111111
Q ss_pred ccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 013910 259 SILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMG 338 (434)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (434)
+.+.........+..+.++++...++.+.||+|+|+.+..+.+...+......+..+.+........-.+....
T Consensus 236 ------g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~ 309 (382)
T TIGR00902 236 ------GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAV 309 (382)
T ss_pred ------CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 11111111222345677888888999999999999999888777776555444433333222211111111112
Q ss_pred hhhhhhhhcccccCCCchhhHHhHHHHh-hhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 013910 339 TFIIANIFAPEIYPTSMRSTGAGVAYAV-GRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 405 (434)
Q Consensus 339 ~~~~~~~~~~El~P~~~R~~a~gi~~~~-~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 405 (434)
..+....+.++. |++.|+++.++.+.. ..+|.+++|.+.+.+.|..+. ..++..+++.+++.++.
T Consensus 310 ~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 310 CHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 233344556677 898999999997654 458888999999999987764 45666677666665443
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.72 E-value=3.1e-14 Score=138.92 Aligned_cols=308 Identities=9% Similarity=-0.046 Sum_probs=162.5
Q ss_pred hhHhhhcch----HHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHH
Q 013910 23 LYFIFAFSR----MSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 23 ~~~~~~GRr----~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
...||+||| +.+.+..... .......++|++.+++.|++.|++.+.. +....+..++ .++|++..+.....
T Consensus 61 ~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~ 136 (382)
T PRK11128 61 PRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLW 136 (382)
T ss_pred HHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHH
Confidence 469999994 3332222211 1223345688999999999999876654 3333344444 45678888888888
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccC
Q 013910 98 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTS 177 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~ 177 (434)
.++|..++++++..+.+..|||..|++.++..++..+.....||.++ +++.
T Consensus 137 ~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~----~~~~------------------------- 187 (382)
T PRK11128 137 GSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP----QGES------------------------- 187 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC----cccc-------------------------
Confidence 89999999999999888889999998877654444333333444311 0000
Q ss_pred CCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 013910 178 DGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKC 256 (434)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
++ + .++ ....++..++ ++.+.-........... .+...+.+.+..+.
T Consensus 188 ------~~--~-~~~----------------~~~~~~~i~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~--- 235 (382)
T PRK11128 188 ------RQ--Q-ESA----------------GWPAWKALLKEPTVWRFLLCVSLLQGSH----AAYYGFSAIYWQAA--- 235 (382)
T ss_pred ------cc--c-ccc----------------ccchHHHHHcChhHHHHHHHHHHHHHHh----HhHHHHHHHHHHHC---
Confidence 00 0 000 0001222332 22222211111111111 11111111111110
Q ss_pred CcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 013910 257 SSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFS 336 (434)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
+.+....-....+..+..+++..+.+.+.||.|+|+.+..+.+...+..+.....++.+..........+..
T Consensus 236 --------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 307 (382)
T PRK11128 236 --------GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTF 307 (382)
T ss_pred --------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 011111111222445667788888999999999999988777666554443333333232222111111111
Q ss_pred hhhhhhhhhhcccccCCCchhhHHhHHHHhh-hHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 013910 337 MGTFIIANIFAPEIYPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 405 (434)
Q Consensus 337 ~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~-~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 405 (434)
....+....+..+. |+..+++..++.+..+ .+|..++|.+.+.+.|..|. ..++..+++.+++.++.
T Consensus 308 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 308 TVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALFIR 375 (382)
T ss_pred HHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 11223333445565 4444678888876554 45668899999999887764 34555555555544433
No 85
>PTZ00207 hypothetical protein; Provisional
Probab=99.71 E-value=5e-15 Score=148.96 Aligned_cols=139 Identities=17% Similarity=0.130 Sum_probs=105.8
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhc------ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFS------PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV 93 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~------~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~ 93 (434)
..++.||+|||+++.++.+++.++.++++++ +++.++++.|++.|+|.+... .....+.+++| ++||++.++
T Consensus 81 ~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi 159 (591)
T PTZ00207 81 YSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAI 159 (591)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHH
Confidence 3468999999999999999999999999887 689999999999999977653 33445678886 789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HH--hcCCChhHHhhcCChHHHHHHHHH
Q 013910 94 FSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IV--FMPESPRYLCTKGRITDAHNILDK 161 (434)
Q Consensus 94 ~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~--~lpESp~~l~~~~~~~~a~~~l~~ 161 (434)
...+..+|..+.+.+...+.. .+|+..|++.++.+++..+. .. ..|++|+|...++|.+++++.+++
T Consensus 160 ~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 160 MKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 999999999765544433322 46888888777666655333 22 357788887677766676666444
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.69 E-value=6.1e-14 Score=137.20 Aligned_cols=318 Identities=13% Similarity=-0.000 Sum_probs=167.5
Q ss_pred hhhhhhh----hHhhhcchHHHHHHHHHHHH-HHHHHh-h--ccc-HHHHHHHHHHHHhcCCC-chhhhhhhhhccCCCc
Q 013910 17 KLLLEPL----YFIFAFSRMSILGGALVTFV-AGLLSA-F--SPN-YISLLILRGLAGAGLGS-GHVFFSWFMEFVPPSN 86 (434)
Q Consensus 17 ~~~~~~~----~~~~~GRr~~l~~~~~~~~i-~~~~~~-~--~~~-~~~l~~~R~l~Gig~g~-~~~~~~~~~E~~p~~~ 86 (434)
|.++.|. ..||+|||+..++.+.+... .....+ + .++ ...++..-++.++..+. ......+..|..++++
T Consensus 51 ~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~ 130 (390)
T TIGR02718 51 KFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT 130 (390)
T ss_pred HHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh
Confidence 5566664 47889999997666533222 121122 2 222 22333333333232222 2233445678888888
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHc
Q 013910 87 RGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFN 166 (434)
Q Consensus 87 Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~ 166 (434)
++...+....+..+|.++++.....+.+..+||..|++.++..++..+..++++|++. ++.++
T Consensus 131 ~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~~~------------ 193 (390)
T TIGR02718 131 LAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAV-----ASPEA------------ 193 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCc-----Ccccc------------
Confidence 8988888888889999999887777777889999999998877765555555544321 00000
Q ss_pred CCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 167 QTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLA 246 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 246 (434)
++ + + . .++...++++...........+......+++.. .
T Consensus 194 -----------------~~-----~--------~------~---~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~ 232 (390)
T TIGR02718 194 -----------------PL-----A--------R------R---ASLFRFFRRPLAWSLLALALLSAMTAVSGFGLS--K 232 (390)
T ss_pred -----------------ch-----h--------h------H---HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHh--h
Confidence 00 0 0 0 011122222222222222222222112222211 1
Q ss_pred HhhhcccCCCCcccccccCccchhHHHHHHHH-HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHH-HHHhhh----
Q 013910 247 SELSGSQSKCSSSILLSENVQDASVYINVFIT-SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLL-PLVTLQ---- 320 (434)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~-~~~~~~---- 320 (434)
+.+. +. +.+........... ....+.|.++++++.||+|+|+.+..+......... ......
T Consensus 233 ~~l~-~~-----------G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 300 (390)
T TIGR02718 233 LYLV-DA-----------GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLA 300 (390)
T ss_pred HHHH-hc-----------CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccC
Confidence 1111 10 11111111111111 234567788999999999999988776655422221 111110
Q ss_pred -hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHH
Q 013910 321 -SNILLTALLSGARMFSMGTFIIANIFAPEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALI 398 (434)
Q Consensus 321 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~-~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~ 398 (434)
.............+......+..+....+..++ +.+++++++.++...+|++++|.+.+.+.|..|....+...+++.
T Consensus 301 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~ 380 (390)
T TIGR02718 301 PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLA 380 (390)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 111111111111111112233444454555555 899999999999999999999999999988776555666666655
Q ss_pred HHHHHH
Q 013910 399 VLSVVV 404 (434)
Q Consensus 399 ~i~~~~ 404 (434)
+++.+.
T Consensus 381 l~a~~~ 386 (390)
T TIGR02718 381 VLAILL 386 (390)
T ss_pred HHHHHH
Confidence 555443
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.69 E-value=4.1e-14 Score=141.64 Aligned_cols=111 Identities=14% Similarity=0.038 Sum_probs=96.0
Q ss_pred hhhHhh-hcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCc---chhHHHHHHH
Q 013910 22 PLYFIF-AFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVFST 96 (434)
Q Consensus 22 ~~~~~~-~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~ 96 (434)
.+..|| +|||+++.++.+++.++.++.++++++..++++|++.|+|.|.. +......+|++|+++ |+...+++..
T Consensus 69 G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~ 148 (475)
T TIGR00924 69 WWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYM 148 (475)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHH
Confidence 468899 89999999999999999999999999999999999999998875 345567789998764 8889999999
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 013910 97 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVL 132 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~ 132 (434)
+.++|..+++.++..+.+..+||+.|.+.++..++.
T Consensus 149 ~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 149 SINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIG 184 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 999999999999888888789999999877644443
No 88
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.68 E-value=6.5e-14 Score=140.34 Aligned_cols=327 Identities=17% Similarity=0.087 Sum_probs=195.7
Q ss_pred hhhhhhh---hhHhhhcchHHHHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCc
Q 013910 16 PKLLLEP---LYFIFAFSRMSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN 86 (434)
Q Consensus 16 ~~~~~~~---~~~~~~GRr~~l~~~~~~~~i~~~~~~~-----~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~ 86 (434)
|.+++.| .+.||+.||+.++.+..+..+..++.++ ..+.+.+++.-++.|++.+.. ++-.+.+-|..|+++
T Consensus 57 P~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 57 PILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh
Confidence 4444444 6999999999999999887765444332 246788999999999987765 344567789999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHc
Q 013910 87 RGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFN 166 (434)
Q Consensus 87 Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~ 166 (434)
...+.++.+...++..++||.+++.+....|=.+.|.+.++.-++.+.....++..+. +++. +.+
T Consensus 137 L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~~~~-~~e---------- 201 (524)
T PF05977_consen 137 LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP----PSSL-PRE---------- 201 (524)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----cccc-chh----------
Confidence 9999999999999999999999998877778888888887655544433333322110 0000 000
Q ss_pred CCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 167 QTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLA 246 (434)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 246 (434)
...++ -+ ..++...+.+..+..++...++......++.+ .
T Consensus 202 ---------------------------~~~~~-------l~---~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aL---l 241 (524)
T PF05977_consen 202 ---------------------------RFFSA-------LR---EGLRYVRSSPPLRSVLLRSFLFNLFASAVWAL---L 241 (524)
T ss_pred ---------------------------hhhhh-------HH---HHHHHHhcchHHHHHHHHHHHHHHhhhHHHHh---h
Confidence 00000 00 01222232233333322222221111112221 1
Q ss_pred HhhhcccCCCCcccccccCccchhHHH-HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 013910 247 SELSGSQSKCSSSILLSENVQDASVYI-NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILL 325 (434)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (434)
+.+.... .+. +...|. .....+++++.|.++.+.+.+|+++++.+..+.+..++.++.+....+.+..
T Consensus 242 Pl~a~~~----------l~~-~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~ 310 (524)
T PF05977_consen 242 PLFARDV----------LGG-GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLA 310 (524)
T ss_pred hHHHHHH----------hCC-cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHH
Confidence 2111100 001 111222 2234456677777777777777887777777776666665555544443333
Q ss_pred HHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 013910 326 TALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 405 (434)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 405 (434)
....+...++.............+..|.++|++++++..++...+..++..+.+.+.+..|....+.+.++..+++.++.
T Consensus 311 ~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 311 LIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 33222222233333445566778999999999999999988888777888888888887776666666555555555555
Q ss_pred Hhc
Q 013910 406 LLI 408 (434)
Q Consensus 406 ~~~ 408 (434)
...
T Consensus 391 ~~~ 393 (524)
T PF05977_consen 391 LRF 393 (524)
T ss_pred HHh
Confidence 433
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.68 E-value=4.3e-15 Score=148.09 Aligned_cols=363 Identities=18% Similarity=0.157 Sum_probs=202.5
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHH-HHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILR-GLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R-~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
.+.||+|.|.+.+.+.++..++.++.+|+++++++++.- ++.|+|.|..+.....+.-.+-+|+|+.+.++...+..+|
T Consensus 103 ~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G 182 (509)
T KOG2504|consen 103 ALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVG 182 (509)
T ss_pred HHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcc
Confidence 589999999999999999999999999999997766654 5777888875433222222334889999999999999999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCC
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGT 180 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~-~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 180 (434)
.++-+.+.-.+.+..|||+.+.+.+...+...+.- ..-|.+|+-. .+ ++++ .+.... ..+..+...+..
T Consensus 183 ~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~---~~-~~~~--~~~~~~----~~~~~~~~~~~~ 252 (509)
T KOG2504|consen 183 TVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK---PN-EEKD--LRNSAA----SVESTPKPVELR 252 (509)
T ss_pred eeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC---ch-hhhh--hccccc----cccccccccccc
Confidence 99989888888889999999998877665554443 3345444311 11 1111 111000 000000000000
Q ss_pred CCCcccccC---CCCccccccccccccccccccchhhhccCcchHH-HHHHHHHHH-HHHHHHHHHHHHHHHhhhcccCC
Q 013910 181 NDLDEEFST---SEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFK-TTILLWVLY-FGNSFVYYGIVLLASELSGSQSK 255 (434)
Q Consensus 181 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
...++.... .+.....++..++. .....+....++..+..+ +..+...+. ..+.+.++-...+.+.+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~--- 327 (509)
T KOG2504|consen 253 ISERDSGLKKLSLSNLATLKRGPDKW--RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS--- 327 (509)
T ss_pred cccCCCCCCcccccchhhhhhCCccc--cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 000000000 00000000000000 000000001011111111 122222221 22333333333333333221
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 013910 256 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGR--KLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGAR 333 (434)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gR--R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
....+.......-+.+...++|.++.|++.|+-.. +....++.+++++.........+.+..... ....
T Consensus 328 --------~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~-~~~f 398 (509)
T KOG2504|consen 328 --------LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVF-SILF 398 (509)
T ss_pred --------cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHH
Confidence 11222223333445567889999999999999874 344455555555554333332222221111 1111
Q ss_pred HHHhhhh-hhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchh-hHHHHHHHHHHHHHHHHHhcc
Q 013910 334 MFSMGTF-IIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 334 ~~~~~~~-~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~-~~~~~~~~~~~i~~~~~~~~~ 409 (434)
.+..+.+ .....+..|+.+.+.-+.+.|+...+..++..++|.+.+.+.|.++.+ ..+++.+.+.+++++..++.+
T Consensus 399 G~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 399 GFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 1223333 344568899999999999999999999999999999999888887744 556666677677766665554
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.68 E-value=5.2e-14 Score=140.88 Aligned_cols=335 Identities=17% Similarity=0.181 Sum_probs=181.7
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
..++|.+|||..++.+.++..++.+.++.++|..+++++-.+.|+|.|........++|..|.|.|+...++........
T Consensus 99 G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~ 178 (599)
T PF06609_consen 99 GRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIIT 178 (599)
T ss_pred HHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhh
Confidence 36999999999999999999999999999999999999999999997766555545789999999988777666555554
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH--HHHhcCCChhHHhhc-CChHHHHHHHHHHHHH-------------
Q 013910 102 SVSEAALAWIVMPILTWRWLLALSAIPAFVLLI--FIVFMPESPRYLCTK-GRITDAHNILDKIAQF------------- 165 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~--~~~~lpESp~~l~~~-~~~~~a~~~l~~~~~~------------- 165 (434)
...++.++..+..+.+|||.|++..+...+.++ ..++.|.+.+-+..+ .+..|..+.++++.-.
T Consensus 179 ~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl 258 (599)
T PF06609_consen 179 TWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGL 258 (599)
T ss_pred hcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 445666666666677999999998876555433 234445332211111 1223344445554421
Q ss_pred cCCCCCCCCccCCCCCCCcccccCCCCccccc-------c--ccccccccccccchhhhccCcchHHHHHHHHHHHHHHH
Q 013910 166 NQTSLPSGNLTSDGTNDLDEEFSTSEETPLLS-------S--ARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNS 236 (434)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 236 (434)
+-...+.. .-++.+.-.... . ..+.....++++.+.+ +++. +|......+..+...
T Consensus 259 ~wgG~~~~------------~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~-Lf~~--~r~~~~~lvi~fi~G 323 (599)
T PF06609_consen 259 SWGGYPYY------------PWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHR-LFKD--RRGFAALLVISFISG 323 (599)
T ss_pred hccCCCCC------------CCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHH-Hhcc--chHHHHHHHHHHHHH
Confidence 10110000 000000000000 0 0000001112222222 2221 112222223333344
Q ss_pred HHHHHHH-HHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhH-HHHHHHHHHHHHHH
Q 013910 237 FVYYGIV-LLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKL-SMTIMFIFVCIFLL 314 (434)
Q Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~-~~~~~~~~~~~~~~ 314 (434)
..||+.. +|+......... ...............+.+...|.++.+.+..|++|-+ .++++..+...++.
T Consensus 324 ~~~~s~~~l~p~~~~~vf~~--------d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~G 395 (599)
T PF06609_consen 324 MNFFSVNILWPQQVVNVFGS--------DPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCG 395 (599)
T ss_pred HHHHHHHHHHHHHHhhhccC--------CCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHH
Confidence 4455554 344332211000 0000000011122234445667777888888887644 44555544444333
Q ss_pred HHHh--hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHH
Q 013910 315 PLVT--LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 379 (434)
Q Consensus 315 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~ 379 (434)
.+.. .++....+.+...+.++..+......+...-..|++.-+++.|+..++..+||.++.-+..
T Consensus 396 ama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 396 AMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3332 2222222233333333333334455667777889999999999999998888877655554
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.66 E-value=1.1e-13 Score=138.85 Aligned_cols=107 Identities=17% Similarity=0.112 Sum_probs=92.1
Q ss_pred hhhhHhh-hcchHHHHHHHHHHHHHHHHHhhcccHHH-HHHHHHHHHhcCCCc-hhhhhhhhhccCCC--cchhHHHHHH
Q 013910 21 EPLYFIF-AFSRMSILGGALVTFVAGLLSAFSPNYIS-LLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVFS 95 (434)
Q Consensus 21 ~~~~~~~-~GRr~~l~~~~~~~~i~~~~~~~~~~~~~-l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~ 95 (434)
-.+..|| +|||+++..+.+++.++.+.++++++... ++++|+++|+|.|.. +...+.+.|.+|++ +|+...+++.
T Consensus 70 ~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~ 149 (489)
T PRK10207 70 GGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFY 149 (489)
T ss_pred HHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHH
Confidence 3478999 99999999999999999999998876554 558999999998876 34566788999987 4577889999
Q ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 013910 96 TFWTFGSVSEAALAWIVMPILTWRWLLALSAI 127 (434)
Q Consensus 96 ~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i 127 (434)
.++++|..+++.++.++.+..|||+.|++..+
T Consensus 150 ~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 150 MSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 99999999999999988888899999998755
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.66 E-value=1.4e-13 Score=138.53 Aligned_cols=112 Identities=14% Similarity=0.031 Sum_probs=91.4
Q ss_pred hhhhhHhh-hcchHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCc--chhHHHHH
Q 013910 20 LEPLYFIF-AFSRMSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN--RGKWMVVF 94 (434)
Q Consensus 20 ~~~~~~~~-~GRr~~l~~~~~~~~i~~~~~~~~~-~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~--Rg~~~~~~ 94 (434)
+-.++.|| +|||+.+..+.++..++..+.++++ +...++++|+++|+|.|... ....++.|++|+++ |+...+++
T Consensus 76 ~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~ 155 (500)
T PRK09584 76 IGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMY 155 (500)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHH
Confidence 44579999 5999999999999999988888874 56678889999999988653 44467789998754 44567888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 013910 95 STFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFV 131 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l 131 (434)
..+.++|..+++.++.++.+..|||+.|.+.++..++
T Consensus 156 ~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 156 YMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 8999999999999998888888999999988754443
No 93
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.66 E-value=1.7e-14 Score=133.00 Aligned_cols=119 Identities=21% Similarity=0.165 Sum_probs=96.4
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 102 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 102 (434)
-++||||||+++.+++...+++..+.++++|+..+.+.|++.|+.-|--.+..++++|+.++|+|++.++..+.++.+|.
T Consensus 90 ~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGf 169 (451)
T KOG2615|consen 90 CLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGF 169 (451)
T ss_pred hhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcch
Confidence 38999999999999999999999999999999777777999999999888888899999999999999999999999999
Q ss_pred HHHHHHHHHHhc---ccchHHHHHH----HHHHHHH-HHHHHHhcCCC
Q 013910 103 VSEAALAWIVMP---ILTWRWLLAL----SAIPAFV-LLIFIVFMPES 142 (434)
Q Consensus 103 ~l~~~l~~~~~~---~~~Wr~~f~~----~~i~~~l-~~~~~~~lpES 142 (434)
++||.++..+.. ..+ +++|.. ..+.... ...+.+++||+
T Consensus 170 ilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 170 ILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred hhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999887654 111 122222 2222222 33445778998
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.63 E-value=5.1e-14 Score=135.79 Aligned_cols=121 Identities=14% Similarity=0.156 Sum_probs=103.4
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
..+++||+|-|+++.++.+.+++.+++.++++++..+.+.|++.|++.|+..+...++..|+|+++|+++.+....+..+
T Consensus 82 ~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~v 161 (511)
T TIGR00806 82 VFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLL 161 (511)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 34699999999999999999999999999999999999999999999999876677899999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHH---HHHHHHHHHHhcCCC
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAI---PAFVLLIFIVFMPES 142 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i---~~~l~~~~~~~lpES 142 (434)
|.+++++++.+ ....|||+.+-+.-+ ...+..+..+++|-.
T Consensus 162 G~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 162 GVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999888 456799997665533 222334455677833
No 95
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.63 E-value=2.3e-12 Score=127.88 Aligned_cols=330 Identities=17% Similarity=0.213 Sum_probs=189.5
Q ss_pred hHhhhcchHHHHHHHHHHH-HHHHHHhhc-cc-HHHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcc------------
Q 013910 24 YFIFAFSRMSILGGALVTF-VAGLLSAFS-PN-YISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNR------------ 87 (434)
Q Consensus 24 ~~~~~GRr~~l~~~~~~~~-i~~~~~~~~-~~-~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~R------------ 87 (434)
+.|+-||||-++....+.. ++++...+. ++ +....+.-++.-++.+...+. .+++-|.++++.+
T Consensus 93 ~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~ 172 (477)
T PF11700_consen 93 IADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGN 172 (477)
T ss_pred HHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCC
Confidence 7898888877766555444 455555553 33 333333333333444444444 4678899999988
Q ss_pred --------------hhHHHHHHHHHHHHHHHHHHHHHHHh--c------ccchHHHHHHHHHHHHHH-HHHHHhcCCChh
Q 013910 88 --------------GKWMVVFSTFWTFGSVSEAALAWIVM--P------ILTWRWLLALSAIPAFVL-LIFIVFMPESPR 144 (434)
Q Consensus 88 --------------g~~~~~~~~~~~~G~~l~~~l~~~~~--~------~~~Wr~~f~~~~i~~~l~-~~~~~~lpESp~ 144 (434)
++.++.-....++|.++.-.+...+. . ..+-|..+.+.++.-++. ++..+++||.|+
T Consensus 173 ~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 173 ISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred CChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 89988877777777776655544431 1 234588888888775554 566777888775
Q ss_pred HHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHH
Q 013910 145 YLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKT 224 (434)
Q Consensus 145 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (434)
-...+....-.....+++. +.++...+.+....
T Consensus 253 ~~~~~~~~~~~~~g~~~l~-----------------------------------------------~t~k~~~~~~~~~~ 285 (477)
T PF11700_consen 253 PRPLPSGSSYLRFGFKRLW-----------------------------------------------RTFKEIRKLRQLFL 285 (477)
T ss_pred CCCCCcchhHHHHHHHHHH-----------------------------------------------HHHHHHHhChHHHH
Confidence 1000000000011111110 01111111122222
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchh--H
Q 013910 225 TILLWVLYF--GNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK--L 300 (434)
Q Consensus 225 ~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR--~ 300 (434)
.++.+.++. .+.+...+..+....+ +.+..+.....++..+.+++|.++.+++.||+|.| +
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~~l---------------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~ 350 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATEVL---------------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKR 350 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc---------------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Confidence 333333321 1222222222222111 12223444556777789999999999999999998 6
Q ss_pred HHHHHHHHHHHH-HHHHH-h------hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHh
Q 013910 301 SMTIMFIFVCIF-LLPLV-T------LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGM 372 (434)
Q Consensus 301 ~~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~ 372 (434)
++..+.+...+. +..+. . ..+.+....+.....++..+..+..-.+.+|+.|+...+.-+|+-...++..++
T Consensus 351 ~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~ 430 (477)
T PF11700_consen 351 TLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSW 430 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 666654444322 22222 0 222333333322222333455778889999999999999999999999999999
Q ss_pred hHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 013910 373 VCPLVAVGLVTSCHQ-TAAILLLEALIVLSVVVILLIPFETKGKE 416 (434)
Q Consensus 373 ~~p~~~~~l~~~~g~-~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 416 (434)
++|.+++.+.+.+|+ ...+....++.+++.++. ...++.|+|.
T Consensus 431 lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 431 LGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 999999999888874 355555556556665555 5555777664
No 96
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=3.4e-14 Score=131.74 Aligned_cols=117 Identities=19% Similarity=0.250 Sum_probs=105.5
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCc-chhHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN-RGKWMVVFSTFWTF 100 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~-Rg~~~~~~~~~~~~ 100 (434)
-++||+|+|-.++.+.+++..++++.++.++|++++++|.+||+|-+... +..+.+++.+|.+. ||+++|....+..+
T Consensus 128 ~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfisl 207 (464)
T KOG3764|consen 128 NLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISL 207 (464)
T ss_pred hhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhc
Confidence 38999999999999999999999999999999999999999999987764 45677888888865 79999999999999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhc
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFM 139 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~l 139 (434)
|.++||+.++++-+..|.+.+|++.++..++-....+++
T Consensus 208 G~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 208 GVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred cceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 999999999998888899999999998888877666654
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.56 E-value=9.4e-14 Score=143.14 Aligned_cols=121 Identities=16% Similarity=0.225 Sum_probs=100.4
Q ss_pred hhhHhhhcchHHHHHHHHHHHHHHHHHhhcc-------------------------------------------------
Q 013910 22 PLYFIFAFSRMSILGGALVTFVAGLLSAFSP------------------------------------------------- 52 (434)
Q Consensus 22 ~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~------------------------------------------------- 52 (434)
..+.||+|||+.+.++.+++++++++.++.+
T Consensus 89 ~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 168 (633)
T TIGR00805 89 SYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKE 168 (633)
T ss_pred HHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCC
Confidence 3688999999999999999999999887652
Q ss_pred --cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhccc-------------
Q 013910 53 --NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPIL------------- 116 (434)
Q Consensus 53 --~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~------------- 116 (434)
.+..++++|+++|+|.+... ....|+.|++|+++|+++.++++.+..+|..++++++..+.+.+
T Consensus 169 ~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l 248 (633)
T TIGR00805 169 SLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVIL 248 (633)
T ss_pred CceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCC
Confidence 25678899999999998864 55678999999999999999999999999999998887654321
Q ss_pred ---------chHHHHHHHHHHHHHHHHHHHhcCCC
Q 013910 117 ---------TWRWLLALSAIPAFVLLIFIVFMPES 142 (434)
Q Consensus 117 ---------~Wr~~f~~~~i~~~l~~~~~~~lpES 142 (434)
.||..|.+.++..++..+..+++||.
T Consensus 249 ~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 249 TPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 27888988888887776666667764
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.4e-11 Score=115.29 Aligned_cols=300 Identities=14% Similarity=0.140 Sum_probs=188.2
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHh---hcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSA---FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFST 96 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~---~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~ 96 (434)
.+.+.+|+|+|+.++++..+++++..+.. -..+|..++++=|+.|.|.|.- ....+|++-.-|++.-...+.+.|.
T Consensus 68 a~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~ 147 (422)
T COG0738 68 AGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQA 147 (422)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHH
Confidence 44688999999999999999999998874 4568999999999999999985 4556788888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHhc-------------------ccchHHHHHHHHHHHHHHHHHHHh--cCCChhHHhhcCChHHH
Q 013910 97 FWTFGSVSEAALAWIVMP-------------------ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDA 155 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~-------------------~~~Wr~~f~~~~i~~~l~~~~~~~--lpESp~~l~~~~~~~~a 155 (434)
+..+|.+++|.++..+.. ...||+++...+...+++.+.... +||-+.
T Consensus 148 fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~----------- 216 (422)
T COG0738 148 FNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV----------- 216 (422)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-----------
Confidence 999999999988765432 124777777766655555444332 222110
Q ss_pred HHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHH
Q 013910 156 HNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGN 235 (434)
Q Consensus 156 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 235 (434)
++.++ .++ + . ....++++.++.+.-.+..++|.+.
T Consensus 217 -------------------------~~~~~--------------~~~----~-~-~~~~~l~~~~~~~~gvl~~FlYVG~ 251 (422)
T COG0738 217 -------------------------AAPSL--------------GAS----G-S-AGLSSLFQNKHLRLGVLAIFLYVGA 251 (422)
T ss_pred -------------------------ccccc--------------ccc----c-c-chHHHHHhChHHHHHHHHHHHHHhH
Confidence 00000 000 0 0 0122344444444444555666655
Q ss_pred HHHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q 013910 236 SFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP 315 (434)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~ 315 (434)
....+..... +..+. ...+..+..-|.. ....+.++|.+++.+++.|+...+.+....++..+.++.
T Consensus 252 Eva~gsfl~~---y~~~~--------~g~~~~~aa~~~s--~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~ 318 (422)
T COG0738 252 EVAIGSFLVS---YLEEL--------LGLNEQQAAYYLS--FFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA 318 (422)
T ss_pred HHHHHHHHHH---HHHhc--------CCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 4443332221 11110 0001111222222 223566789999999999999999988877666666555
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHH
Q 013910 316 LVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAIL 392 (434)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~ 392 (434)
.....+.. ..........+....++..+....+..|..... .|....++-+||.+.|.+.+.+.|..+....+.
T Consensus 319 ~~l~~g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~ts~--~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 319 VALIGGVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHTSV--GSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHhcChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCccccc--cceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 55444322 222233333455667888888888999843333 333344455788999999999988776544444
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.55 E-value=2.7e-12 Score=126.65 Aligned_cols=349 Identities=15% Similarity=0.080 Sum_probs=181.6
Q ss_pred hhhh---hhHh----hhcchHHHHHH-HHHHHHHHHHHhhcccHHHHH------------HHHHHHHh-----cCCCch-
Q 013910 19 LLEP---LYFI----FAFSRMSILGG-ALVTFVAGLLSAFSPNYISLL------------ILRGLAGA-----GLGSGH- 72 (434)
Q Consensus 19 ~~~~---~~~~----~~GRr~~l~~~-~~~~~i~~~~~~~~~~~~~l~------------~~R~l~Gi-----g~g~~~- 72 (434)
+.+| .++| |+|||+.+++. .....++..+.+++++...++ +.+++.|+ +.....
T Consensus 54 i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~ 133 (477)
T TIGR01301 54 LVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG 133 (477)
T ss_pred HHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555 5999 59999999886 444445556667776653222 13444443 332222
Q ss_pred hhhhhhhhccCCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHh--cc-------------cchHHHHHHHHHHHHHHHH-
Q 013910 73 VFFSWFMEFVPPSNR--GKWMVVFSTFWTFGSVSEAALAWIVM--PI-------------LTWRWLLALSAIPAFVLLI- 134 (434)
Q Consensus 73 ~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~~l~~~l~~~~~--~~-------------~~Wr~~f~~~~i~~~l~~~- 134 (434)
...+++.|.+|+++| +...++.+.+..+|.++++.+++... .. .+-|+.|.+.++..++..+
T Consensus 134 p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~ 213 (477)
T TIGR01301 134 PCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYI 213 (477)
T ss_pred HHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 234578899999865 67889999999999999998876531 10 1578999998877666544
Q ss_pred HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhh
Q 013910 135 FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFL 214 (434)
Q Consensus 135 ~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
..+..+|.|... .+ +..+ ++.++ .++.+.. ...++-+++++
T Consensus 214 t~~~v~E~~~~~--~~---~~~~-----------------------~~~~~-~~~~~~~----------~~~~~i~~~~~ 254 (477)
T TIGR01301 214 ALSAVKENPLIG--SD---DFIN-----------------------SEAAP-PSKHGEE----------AFFGELFGAFK 254 (477)
T ss_pred HeeeeeccCCCc--cc---cchh-----------------------hhccc-ccccchh----------hhHHHHHHHHH
Confidence 455688876310 00 0000 00000 0000000 00001111111
Q ss_pred hccCcchHHHHHH-HHHHHHHH-HHHHHHHHHHHHhhhcccCCCCcccccccCccch-h-HHHHHHHHHhhhhhHHHHHH
Q 013910 215 MLFSPRFFKTTIL-LWVLYFGN-SFVYYGIVLLASELSGSQSKCSSSILLSENVQDA-S-VYINVFITSFAELPGLLTAA 290 (434)
Q Consensus 215 ~~~~~~~~~~~~i-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~ 290 (434)
. -|+..++..+ ..+.|++. .+.+|...+....+........ ...++. . --...++.++...+..++-.
T Consensus 255 ~--mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~------~~y~~gvr~G~~~l~~~s~~~~i~s~~l~ 326 (477)
T TIGR01301 255 Y--LPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG------AKYDDGVRAGAFGLMLNSVVLGITSIGME 326 (477)
T ss_pred H--CCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1333333322 22223221 1112222222222221111000 000000 0 01122333344444455566
Q ss_pred HHHHhhch-hHHHHHHHHHHHHHHHHHHhhhh------h--------------HHHHHHHHHHH-HHHhhhhhhhhhhcc
Q 013910 291 LLVDRVGR-KLSMTIMFIFVCIFLLPLVTLQS------N--------------ILLTALLSGAR-MFSMGTFIIANIFAP 348 (434)
Q Consensus 291 ~l~dr~gR-R~~~~~~~~~~~~~~~~~~~~~~------~--------------~~~~~~~~~~~-~~~~~~~~~~~~~~~ 348 (434)
.+.+|+|+ |.....+.++.++.+....+... . .+.....+... +.....+++.|.+.+
T Consensus 327 ~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 327 KLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 77888884 67767775555554443332110 0 11111111111 112234577888999
Q ss_pred cccCCCch--hhHHhHHHHhhhHhHhhHHHHHHHHhhhcch--hhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 349 EIYPTSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ--TAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 349 El~P~~~R--~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~--~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
+..|++.| +..+|+.|.+-.+..++.....+.+.+..|. ...+.+-++.++++++...++.|+++.
T Consensus 407 ~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 407 IRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99996545 8889999999888888777666665554442 244555667778999999999998864
No 100
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.53 E-value=1.5e-11 Score=116.16 Aligned_cols=275 Identities=13% Similarity=0.108 Sum_probs=156.0
Q ss_pred hcccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Q 013910 50 FSPNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP-------------- 114 (434)
Q Consensus 50 ~~~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~-------------- 114 (434)
...+|..++++-|+.|.|.+.. ....+|+++..|++++.+.+++.+.++.+|.+++|.++..+..
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999885 4567899999999999999999999999999999999876542
Q ss_pred --ccchHHHHHHHHHHHHHHHHHHHh--cCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCccCCCCCCCcccccCC
Q 013910 115 --ILTWRWLLALSAIPAFVLLIFIVF--MPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTS 190 (434)
Q Consensus 115 --~~~Wr~~f~~~~i~~~l~~~~~~~--lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (434)
..+||+++.+.+...++..+.+.+ +||.+. +.++ +. .
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~-----------------------------~~----~ 126 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA-----------------------------RV----S 126 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc-----------------------------cc----c
Confidence 147999999665554444333333 455311 0000 00 0
Q ss_pred CCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccCccchh
Q 013910 191 EETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDAS 270 (434)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (434)
+++. .++ + . .+..++... -.+..+.+.+.-. +...|.+.+..+... .+.+...
T Consensus 127 ~~~~-----~~~----~----~--~~~~~~~~l-~~~~~f~yvg~e~---~~~~w~~~yl~~~~~--------~g~s~~~ 179 (310)
T TIGR01272 127 SGDT-----TQK----T----S--AFQFTHLVL-GALGIFVYVGAEV---SAGSFLVNFLSDPHA--------LGLPEDQ 179 (310)
T ss_pred cccc-----cch----h----h--HHhhHHHHH-HHHHHHHHHHHHH---HHHHHHHHHHHhccc--------CCCCHHH
Confidence 0000 000 0 0 000011111 1111222222111 111122222110000 0011111
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 271 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
.-........+..+|.+++++++||+|+|+.+..+..++++..+............ ......++....++.......+.
T Consensus 180 a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~ 258 (310)
T TIGR01272 180 AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALNA 258 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 11122334456788999999999999999888776666655443332222221111 22222234445577777778888
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHH
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 393 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~ 393 (434)
+|.+ .+++.++. .++.+|+.+.|.+.+.+.|..+...++++
T Consensus 259 ~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 259 LGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred hhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 8765 34556664 67889999999999988887665555543
No 101
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.51 E-value=1.5e-12 Score=130.15 Aligned_cols=312 Identities=12% Similarity=0.022 Sum_probs=167.3
Q ss_pred hhHhhhc-----chHHHHHHHHHHH-HHHHHHhhcccHHHHHH-HHHHHHhcCCCc-hhhhhhhhhccCCCcchhHHHHH
Q 013910 23 LYFIFAF-----SRMSILGGALVTF-VAGLLSAFSPNYISLLI-LRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKWMVVF 94 (434)
Q Consensus 23 ~~~~~~G-----Rr~~l~~~~~~~~-i~~~~~~~~~~~~~l~~-~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~~~~~ 94 (434)
.++||++ ||+.++++.++.. +.....+..++...+.+ .+++.+++.+.. .+.-.+..|..+ ++++...+..
T Consensus 82 ~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~ 160 (468)
T TIGR00788 82 VMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLV 160 (468)
T ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCee
Confidence 4899998 7787777776663 33333344456555444 888888887664 345667889988 5554433333
Q ss_pred HHH---HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCC
Q 013910 95 STF---WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLP 171 (434)
Q Consensus 95 ~~~---~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~ 171 (434)
... ..+|.++++.+++.+.+..+||..|++.++..++......++||++.....+.+.++ .
T Consensus 161 s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~-~--------------- 224 (468)
T TIGR00788 161 SWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYL-E--------------- 224 (468)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccc-h---------------
Confidence 333 347999998888888777899999999887777665566778886421000000000 0
Q ss_pred CCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013910 172 SGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELS 250 (434)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 250 (434)
........ ...+ ..++..+.....++ +..++......+. |. ..+...
T Consensus 225 -----------~~~~~~~~---~~~~-------~~~~~~~~l~~~l~~~~i~~~l~fifl~-------~~----~~~~~~ 272 (468)
T TIGR00788 225 -----------MNMALLTL---GVLA-------NVKVQILGLRGAIQLLEIAKPLIFIFLS-------YA----NLPGAS 272 (468)
T ss_pred -----------hhhhhhhh---hHHH-------HHHHHHHHHHHHHhcHHHHHHHHHHHHH-------Hh----hcCCCC
Confidence 00000000 0000 00000111111122 2222211111110 00 000000
Q ss_pred cccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh----hh-----h
Q 013910 251 GSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT----LQ-----S 321 (434)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~----~~-----~ 321 (434)
... .. ......+.+...........+++.++|..+.+.+.+|++.|+++.++.++..+....... .. .
T Consensus 273 ~~~--f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~ 349 (468)
T TIGR00788 273 GSV--FC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGIS 349 (468)
T ss_pred cee--EE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCC
Confidence 000 00 000011112222233334455778888888888889999999998887776654432210 00 1
Q ss_pred hH-HHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 322 NI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 322 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
.. ..........+.....+.....+.+++.|++.+++++++.+++.++|+.+++.+.+.+.+..|
T Consensus 350 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 350 DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11 110100111111112234457788999999999999999999999999999987777776555
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.49 E-value=2e-11 Score=121.60 Aligned_cols=293 Identities=12% Similarity=0.036 Sum_probs=150.1
Q ss_pred hhHhh----hcchHHHH-HHHHHHHHHHHHHhhccc------HHHHHHHHHHHHhcCCCch-hhhhhhhhcc-CCCcchh
Q 013910 23 LYFIF----AFSRMSIL-GGALVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGH-VFFSWFMEFV-PPSNRGK 89 (434)
Q Consensus 23 ~~~~~----~GRr~~l~-~~~~~~~i~~~~~~~~~~------~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~-p~~~Rg~ 89 (434)
.++|| +|||+.++ .+.....++..+....++ ...+++.-++.+.+..... ...++..|.. ++++|++
T Consensus 67 ~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~ 146 (444)
T PRK09669 67 ALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHS 146 (444)
T ss_pred EeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHH
Confidence 36665 89966555 555666666554444443 3455566666665443322 2335677887 5588998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----h---cccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHhhcCChHHHHHHHHH
Q 013910 90 WMVVFSTFWTFGSVSEAALAWIV----M---PILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAHNILDK 161 (434)
Q Consensus 90 ~~~~~~~~~~~G~~l~~~l~~~~----~---~~~~Wr~~f~~~~i~~~l~~~~~-~~lpESp~~l~~~~~~~~a~~~l~~ 161 (434)
..++...+..+|..+++.+...+ . +..+|+..+.+.++..++..+.. +..+|.++
T Consensus 147 l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~----------------- 209 (444)
T PRK09669 147 LQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYT----------------- 209 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecC-----------------
Confidence 88888877788777766543322 1 13579988887776665544332 23333210
Q ss_pred HHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHH-HHHHHHHH
Q 013910 162 IAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLY-FGNSFVYY 240 (434)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~ 240 (434)
+ ++ .++.+ ..+.++..++.+.++......+.. ...... .
T Consensus 210 ---------~------------~~----~~~~~--------------~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~-~ 249 (444)
T PRK09669 210 ---------P------------EV----DNSSS--------------VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTR-G 249 (444)
T ss_pred ---------C------------CC----cCCCC--------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-h
Confidence 0 00 00000 001222333333322222221111 111100 0
Q ss_pred HHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh--
Q 013910 241 GIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-- 318 (434)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~-- 318 (434)
+...+..... + +..+... .......+..+++..++++++||+|+|+.+..+.....+....+..
T Consensus 250 ~~~~y~~~~~----------~---~~~~~~~-~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 315 (444)
T PRK09669 250 GATLYYVNYV----------L---LRPDLAT-LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP 315 (444)
T ss_pred hhhheeeeee----------c---CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 1100000000 0 0001111 1122333556678888899999999999888766544432222222
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccC-------CCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 319 LQSNILLTALLSGARMFSMGTFIIANIFAPEIYP-------TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P-------~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
..+.+..........+......+..+.+.+|..+ .+..+...|+.+.+.++|..+++.+.+.+.+..|
T Consensus 316 ~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 316 PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1222222222222222233445677888888886 3344667888888899999999998887776443
No 103
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.48 E-value=2.8e-13 Score=136.54 Aligned_cols=142 Identities=17% Similarity=-0.002 Sum_probs=104.3
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHH---HHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH-HH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGL---LSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV-FS 95 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~---~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~-~~ 95 (434)
.+...||+|||+.+..+.+...+... ....+++...++++|++.|++.+... ....++.|.+|++.||...++ ++
T Consensus 306 ~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~ 385 (490)
T PRK10642 306 MGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFN 385 (490)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHH
Confidence 45789999999998887765443332 22335667888999999988765432 344567799999999998886 66
Q ss_pred HHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhc-----CChHHHHHHHHHHH
Q 013910 96 TFWTFGSVSEAALAWIVMP-ILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTK-----GRITDAHNILDKIA 163 (434)
Q Consensus 96 ~~~~~G~~l~~~l~~~~~~-~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~-----~~~~~a~~~l~~~~ 163 (434)
.+...| .+++.+...+.+ ..+|+.++++..+++++..+..+++||||+|+.+| ||.|||.+.+++++
T Consensus 386 ~~~~~g-~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 386 ISVLVA-GLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHH-HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 665554 455555444443 34688888877777777777777789999999865 99999999999875
No 104
>PRK11462 putative transporter; Provisional
Probab=99.43 E-value=1.7e-10 Score=115.24 Aligned_cols=108 Identities=15% Similarity=0.004 Sum_probs=67.4
Q ss_pred hhcchHHHHHHH-HHHHHHHHHHhhccc------HHHHHHHHHHHHhcCCCchh-hhhhhhhccC-CCcchhHHHHHHHH
Q 013910 27 FAFSRMSILGGA-LVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGHV-FFSWFMEFVP-PSNRGKWMVVFSTF 97 (434)
Q Consensus 27 ~~GRr~~l~~~~-~~~~i~~~~~~~~~~------~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p-~~~Rg~~~~~~~~~ 97 (434)
|+|||+..++.. ....++..+.-..|+ ...+.+.-++..++.....+ ..++..|.++ +++|.+..++...+
T Consensus 75 r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~ 154 (460)
T PRK11462 75 RWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVL 154 (460)
T ss_pred CCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 789998777544 555555554433442 23344455555554433322 2345678888 78999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-------ccchHHHHHHHHHHHHHHHH
Q 013910 98 WTFGSVSEAALAWIVMP-------ILTWRWLLALSAIPAFVLLI 134 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~-------~~~Wr~~f~~~~i~~~l~~~ 134 (434)
..+|..+++.+...+.. ..+|+....+.+++.++...
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~ 198 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLA 198 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 88888777666443221 13688877777766555443
No 105
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.43 E-value=4e-10 Score=104.07 Aligned_cols=312 Identities=20% Similarity=0.180 Sum_probs=194.3
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
+..|....|+|-++.+..+.++..++.++-... +...++.+-.+.|.|++...+. ..++=|.+|+ +-|.++++|...
T Consensus 65 p~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~s 142 (395)
T COG2807 65 PAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTS 142 (395)
T ss_pred hhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHH
Confidence 356678889999999999999999999888777 7888999999999999887654 4566677754 668899999999
Q ss_pred HHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCCCCCCCCcc
Q 013910 98 WTFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQFNQTSLPSGNLT 176 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~~-~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 176 (434)
...|..+++.++..+.++. +||....+=++++++.++.++ |...|. +. .
T Consensus 143 l~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl--Pq~~r~-----~~---------------~-------- 192 (395)
T COG2807 143 LGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL--PQALRE-----QA---------------A-------- 192 (395)
T ss_pred HHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh--hhcccc-----cc---------------c--------
Confidence 9999999998887776655 799999998889888766554 322210 00 0
Q ss_pred CCCCCCCcccccCCCCccccccccccccccccccchhhhccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 013910 177 SDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFS-PRFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSK 255 (434)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
.. ..+ . + +...+++ +.-++ +...+..+++.||...-|.|.+..+..
T Consensus 193 -------~~----~~~----------~---~----~~~~vw~~~~aW~----vtLfmGlqS~~~Y~~~~WLP~ili~~G- 239 (395)
T COG2807 193 -------SI----ATK----------L---V----SVRKVWRSPLAWQ----VTLFMGLQSLLYYIVIGWLPAILIDRG- 239 (395)
T ss_pred -------cc----ccc----------c---c----cccccccCchhHH----HHHHHHhhHHHHHHHHHHHHHHHHHcC-
Confidence 00 000 0 0 0001221 21221 223334578888988888887764432
Q ss_pred CCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHH
Q 013910 256 CSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVT-LQSNILLTALLSGAR 333 (434)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~-gRR~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 333 (434)
.+........-+..+.+++..+....+.+|. .+|+..+.....+.+....+.+ ..+..+...+.+ .
T Consensus 240 ----------~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~ll--G 307 (395)
T COG2807 240 ----------LSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWALLL--G 307 (395)
T ss_pred ----------CCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH--h
Confidence 1111122233355677889999999999975 4555554443333333333322 222222221111 1
Q ss_pred HHHhhhhhhhhhhcccccCC-CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhH-HHHHHHHHHHHHHHHHh
Q 013910 334 MFSMGTFIIANIFAPEIYPT-SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAA-ILLLEALIVLSVVVILL 407 (434)
Q Consensus 334 ~~~~~~~~~~~~~~~El~P~-~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~-~~~~~~~~~i~~~~~~~ 407 (434)
+...+.+++.-.....-.++ +..+.=.|....+|++-+..+|.+++++.|.+|+... ...++.+.++..+..+.
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 11223455444444444444 3345557888889999999999999999998886533 33444444444444433
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.42 E-value=4.5e-11 Score=118.42 Aligned_cols=293 Identities=18% Similarity=0.169 Sum_probs=165.9
Q ss_pred hhHh----hhcchHHHHH-HHHHHHHHHHHHhhc-c-------cHHHHHHHHHHHHhcCCCchhh-hhhhhhccC-CCcc
Q 013910 23 LYFI----FAFSRMSILG-GALVTFVAGLLSAFS-P-------NYISLLILRGLAGAGLGSGHVF-FSWFMEFVP-PSNR 87 (434)
Q Consensus 23 ~~~~----~~GRr~~l~~-~~~~~~i~~~~~~~~-~-------~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p-~~~R 87 (434)
.++| |+|||+.+++ +.....++..+.... | ....+.+.-++..++.....+. .++..|.++ +++|
T Consensus 59 ~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R 138 (428)
T PF13347_consen 59 YLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDER 138 (428)
T ss_pred EEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhh
Confidence 3677 8998887765 555555655555544 4 1233566666666665554333 456789998 5789
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh----cc---cchHHHHHHHHHHHHHHHHH-HHhcCCChhHHhhcCChHHHHHHH
Q 013910 88 GKWMVVFSTFWTFGSVSEAALAWIVM----PI---LTWRWLLALSAIPAFVLLIF-IVFMPESPRYLCTKGRITDAHNIL 159 (434)
Q Consensus 88 g~~~~~~~~~~~~G~~l~~~l~~~~~----~~---~~Wr~~f~~~~i~~~l~~~~-~~~lpESp~~l~~~~~~~~a~~~l 159 (434)
.+..+.-+.+..+|.++.+.+...+. +. .+|++...+.++..++..+. .+..+|.++ +.+
T Consensus 139 ~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~------~~~------ 206 (428)
T PF13347_consen 139 TRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV------EVT------ 206 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccc------ccc------
Confidence 99999998888888876555544432 11 27999999888877765443 445666110 000
Q ss_pred HHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHH-HHHHHHHH
Q 013910 160 DKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWV-LYFGNSFV 238 (434)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 238 (434)
++ .++.+ ..+.++..++.|.......... .++.+...
T Consensus 207 ------------------------~~----~~~~~--------------~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~ 244 (428)
T PF13347_consen 207 ------------------------EQ----EKKIS--------------LRDSLRSLFRNRPFRILLLAFFLQWLAFALM 244 (428)
T ss_pred ------------------------cc----ccccc--------------cccchhhhcccchHHHHHHHHHHHHhhhhhh
Confidence 00 00000 0012233343333332222222 22222211
Q ss_pred HHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh
Q 013910 239 YYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT 318 (434)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~ 318 (434)
.....++....... .+. .-....+..+..+++..+.++++||+|+|+.+..+..+.++....+.+
T Consensus 245 ~~~~~y~~~~vl~~--------------~~~-~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 245 NTFLPYYFTYVLGN--------------EGL-ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred hhHHHHHHHHHhcC--------------chh-hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 11111112111111 000 011223445667888899999999999999998888777766555444
Q ss_pred hh--hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-------CchhhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 319 LQ--SNILLTALLSGARMFSMGTFIIANIFAPEIYPT-------SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 319 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~-------~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
.. +.+................+...+.+.+|+.+. +..+.-.|+.+...+++..+++.+.+.+++.
T Consensus 310 ~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 310 LGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 32 333333333333333334456778888888873 3447778888888999998888888766543
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.40 E-value=1.1e-10 Score=117.17 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=67.7
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-----LQSNILLTALLSGARMFSMGTFIIANIFAPEIY 351 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 351 (434)
+..+..+++..+.++++||+|+|+.+..+..+..+..+.... ..+.+..........+.........+.+.+|..
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 344667888889999999999999987766554433222211 111122211111111222334556778888884
Q ss_pred C-----CCch--hhHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 013910 352 P-----TSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTSC 385 (434)
Q Consensus 352 P-----~~~R--~~a~gi~~~~~~ig~~~~p~~~~~l~~~~ 385 (434)
+ +..| +..+|....+.+++..+++.+.+.+.+..
T Consensus 354 d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 354 DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred hhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 4444 55678888889999999998888777543
No 108
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.33 E-value=1.1e-09 Score=103.47 Aligned_cols=327 Identities=17% Similarity=0.188 Sum_probs=189.1
Q ss_pred hhHhhhcchHHHHHH-HHHHHHHHHHHhhccc--H-HHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcchhHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGG-ALVTFVAGLLSAFSPN--Y-ISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~-~~~~~i~~~~~~~~~~--~-~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
...|..|+||-.+-. ..+.++++++..++++ + ....+.-++..++.....+. .+++....++++-|+.+++--..
T Consensus 80 ~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~ 159 (438)
T COG2270 80 TIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWAL 159 (438)
T ss_pred hhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCccccccccc
Confidence 378998887665544 4444556666677665 3 34455555666666655554 46777888998888887664444
Q ss_pred HHHHHHHHHHHHHH--H-h---------------cccchHHHHHHHHHHHHHH-HHHHHhcCCChhHHhhcCChHH-HHH
Q 013910 98 WTFGSVSEAALAWI--V-M---------------PILTWRWLLALSAIPAFVL-LIFIVFMPESPRYLCTKGRITD-AHN 157 (434)
Q Consensus 98 ~~~G~~l~~~l~~~--~-~---------------~~~~Wr~~f~~~~i~~~l~-~~~~~~lpESp~~l~~~~~~~~-a~~ 157 (434)
-.+|.++.-..... . . +...=|..+.+.++.-++. +++++..||-++ .+..... -.+
T Consensus 160 gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~---~~~~~~~~l~~ 236 (438)
T COG2270 160 GYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEK---ISSPPPTALRN 236 (438)
T ss_pred ccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccc---ccccchHHHHH
Confidence 44555443322211 1 1 2235788888887765555 455566665543 0000000 000
Q ss_pred HHHHHHHHcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHH--HH
Q 013910 158 ILDKIAQFNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYF--GN 235 (434)
Q Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~ 235 (434)
..+++ +.++++.+..+.....++....+. .|
T Consensus 237 g~k~L-----------------------------------------------~~t~k~i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 237 GFKEL-----------------------------------------------KSTFKEIRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred HHHHH-----------------------------------------------HHHHHHHhcccchHHHHHHHHHHHhhHH
Confidence 01110 112223332233333333333221 23
Q ss_pred HHHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q 013910 236 SFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP 315 (434)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~ 315 (434)
...-.+..+-...+ +.++.+.....+..++.+++|+++++++.||+|-|+++.++.++..+..+.
T Consensus 270 til~~~~~fg~~~~---------------gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~ 334 (438)
T COG2270 270 TILAMGGVFGAADL---------------GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALY 334 (438)
T ss_pred HHHHHHHHHHHHHc---------------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHH
Confidence 33333332222222 233456667777888999999999999999999999888877766655544
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchh-hHHHHH
Q 013910 316 LVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AAILLL 394 (434)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~-~~~~~~ 394 (434)
..+.........+-.....+..+..+..-.+.+++.|++.-+..+|+-+..++..++++|+.+..+.+.+|.. ..+..+
T Consensus 335 ~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i 414 (438)
T COG2270 335 LIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSI 414 (438)
T ss_pred HHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 4443322222222111112233556788899999999999999999999999999999999999888877753 344444
Q ss_pred HHHHHHHHHHHHhcccccCCc
Q 013910 395 EALIVLSVVVILLIPFETKGK 415 (434)
Q Consensus 395 ~~~~~i~~~~~~~~~~et~~~ 415 (434)
..+..++.++.... |+.+.+
T Consensus 415 ~vll~iGl~~L~~v-~~~~~~ 434 (438)
T COG2270 415 IVLLLIGLLLLLRV-KVPGRR 434 (438)
T ss_pred HHHHHhhHhhEEee-cCCCCc
Confidence 45555554444444 444333
No 109
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.32 E-value=1.6e-08 Score=98.69 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=76.3
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHH----HHHHhhhhhhhhhhcccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-QSNILLTALLSGA----RMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~El 350 (434)
.+..+.+++-....+.+..|+|-|++++++.+...+=....... ++.+......... .......+.....+..|.
T Consensus 250 ~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~ 329 (400)
T PF03825_consen 250 ALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRI 329 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 35567888999999999999999999988876665522222222 2222222221111 011112344566788999
Q ss_pred cCCCchhhHHhHHHHhh-hHhHhhHHHHHHHHhhhcch
Q 013910 351 YPTSMRSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCHQ 387 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~-~ig~~~~p~~~~~l~~~~g~ 387 (434)
.|++.|+++.++.+... .+|+.++.++.+.+.|..+.
T Consensus 330 ~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 330 APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGA 367 (400)
T ss_pred CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 99999999999988864 58999999999999987653
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.31 E-value=3.2e-09 Score=102.10 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=92.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
+..+.+++...+..++.+|+|-|+.++++..+..+=.+......+++.....-..-..-.-.......-|.++.+|++..
T Consensus 267 ~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rls 346 (412)
T PF01306_consen 267 VQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLS 346 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGH
T ss_pred HHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHH
Confidence 33467888899999999999999999988777665444434333333322211111000011122345578899999999
Q ss_pred hhHHhHHHHh-hhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 013910 357 STGAGVAYAV-GRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 416 (434)
Q Consensus 357 ~~a~gi~~~~-~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 416 (434)
++...+...+ ..++.++.+...+.+.|..|....+++++.+.+...++..+..+..+...
T Consensus 347 At~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 347 ATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 9999997655 45888888888999999988777888888888877777777765555433
No 111
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.29 E-value=3.5e-11 Score=98.98 Aligned_cols=122 Identities=23% Similarity=0.289 Sum_probs=103.3
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+...||+|||+.+..+.....++.+...+.+++..+.+.+++.|++.+... ....+..|..|+++|++..+..+....
T Consensus 18 ~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (141)
T TIGR00880 18 SGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIA 97 (141)
T ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHH
Confidence 3467899999999999999999888888888999999999999999887653 455678899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPES 142 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpES 142 (434)
+|..+++.+...+.+..+||+.+.+.++..++..+. .+..||+
T Consensus 98 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 98 LGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999888888889999999887776665444 4445653
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.29 E-value=1.5e-08 Score=100.84 Aligned_cols=111 Identities=16% Similarity=0.132 Sum_probs=83.4
Q ss_pred hhhhhHhhh-cchHHHHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCC--cchhHHHHH
Q 013910 20 LEPLYFIFA-FSRMSILGGALVTFVAGLLSAFSP-NYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPS--NRGKWMVVF 94 (434)
Q Consensus 20 ~~~~~~~~~-GRr~~l~~~~~~~~i~~~~~~~~~-~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~ 94 (434)
+-.+..||+ |||+++.++.++..++.++.+... +...++++-.+.++|.|.. ....+++.|.+|++ +|....+++
T Consensus 64 igG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~ 143 (493)
T PRK15462 64 LGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLM 143 (493)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHH
Confidence 344789999 999999999999988877666543 2233444433444455543 23456789999986 798899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q 013910 95 STFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAF 130 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~ 130 (434)
....++|..+++.+...+.+..|||+.|.+.++..+
T Consensus 144 Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~ 179 (493)
T PRK15462 144 YAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMI 179 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Confidence 999999999999999888888899999998766433
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.24 E-value=5.7e-09 Score=101.43 Aligned_cols=292 Identities=16% Similarity=0.109 Sum_probs=160.5
Q ss_pred hhcchHHHHHHH-HHHHHHHHHHhhccc------HHHHHHHHHHHHhcCCCchhh-hhhhhhccC-CCcchhHHHHHHHH
Q 013910 27 FAFSRMSILGGA-LVTFVAGLLSAFSPN------YISLLILRGLAGAGLGSGHVF-FSWFMEFVP-PSNRGKWMVVFSTF 97 (434)
Q Consensus 27 ~~GRr~~l~~~~-~~~~i~~~~~~~~~~------~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p-~~~Rg~~~~~~~~~ 97 (434)
|+|||+-+++.. +..++...++-.+++ ....++.-.+.|++.....+. .++..|.++ ++||.+..++-+.+
T Consensus 78 r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~ 157 (467)
T COG2211 78 RWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVF 157 (467)
T ss_pred ccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHH
Confidence 899988776655 666677766666653 344556666666665443222 234556665 47899999999999
Q ss_pred HHHHHHHHHHHHHHH----hc---ccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHhhcCChHHHHHHHHHHHHHcCCC
Q 013910 98 WTFGSVSEAALAWIV----MP---ILTWRWLLALSAIPAFVLLIFI-VFMPESPRYLCTKGRITDAHNILDKIAQFNQTS 169 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~----~~---~~~Wr~~f~~~~i~~~l~~~~~-~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 169 (434)
..+|.++...+...+ .+ ..|||..-.+.++.+++..+.. +...|.+. ++
T Consensus 158 ~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~---------~~-------------- 214 (467)
T COG2211 158 ASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV---------ET-------------- 214 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC---------cc--------------
Confidence 999987766554333 22 4589998888777776654433 33433321 00
Q ss_pred CCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q 013910 170 LPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYF-GNSFVYYGIVLLASE 248 (434)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~ 248 (434)
+ .++... +++...++...++.|-++..+++....+ ..++.--...++...
T Consensus 215 --------------~-----~~~~~~----------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y 265 (467)
T COG2211 215 --------------Q-----PTKTGV----------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY 265 (467)
T ss_pred --------------c-----cCcccc----------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE
Confidence 0 000000 0000012333443333222222222111 111111000111100
Q ss_pred hhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh--hHHHH
Q 013910 249 LSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLT 326 (434)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 326 (434)
. .+..+...+..........+.+.++...+++|+|+|+++..+.++..+....+.+... .....
T Consensus 266 ~--------------lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~ 331 (467)
T COG2211 266 V--------------LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIV 331 (467)
T ss_pred E--------------cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHH
Confidence 0 1122233334444555666677889999999999999999987777766555544332 22222
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccccC-----CCch--hhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 327 ALLSGARMFSMGTFIIANIFAPEIYP-----TSMR--STGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~El~P-----~~~R--~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
+.............++.|++.+|+.. |..| +...|+..++.++|..++.++.+.++..
T Consensus 332 ~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 332 VALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333334456778888886654 3334 6667888888999988888888776643
No 114
>PRK09848 glucuronide transporter; Provisional
Probab=99.19 E-value=1.1e-08 Score=101.98 Aligned_cols=106 Identities=9% Similarity=0.004 Sum_probs=67.8
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-hh-HHHHHHHHHHHHHHhhhhhhhhhhcccccCC----
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPT---- 353 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~---- 353 (434)
+..+++..+.+.+.||+|+|+.+..+.++..+..+.+.+.. .+ +..........+......+..+...+|..|.
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 45667888889999999999999887766554433333221 12 2111111111122223345567777777764
Q ss_pred ---CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 013910 354 ---SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 385 (434)
Q Consensus 354 ---~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~ 385 (434)
+.++...|+.+...++|..+++.+.+.+.+..
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35688899999999999999988887766543
No 115
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.19 E-value=5.2e-09 Score=105.12 Aligned_cols=181 Identities=13% Similarity=0.193 Sum_probs=104.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchh
Q 013910 220 RFFKTTILLWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK 299 (434)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR 299 (434)
++++.....+..++...+..++...+.+.+..+. +.+............++..++.+++|+++||+|||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r 101 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNL-----------NLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR 101 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 4445555555555555555554444434343221 11111111222334456778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHH
Q 013910 300 LSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAV 379 (434)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~ 379 (434)
+.+..+.++.++..+......+........+...++ .+.......+.+|.+|++.|+++.|+.+..+.+|+.+++.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~-~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~ 180 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS-LATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP 180 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-HHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH
Confidence 988887766665554443332222221111111111 2222333446789999999999999999888888877776665
Q ss_pred HHhh----h-----cchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 380 GLVT----S-----CHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 380 ~l~~----~-----~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
.+.. . .+....+++.++++++..+..++++++.
T Consensus 181 ~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~ 222 (476)
T PLN00028 181 LVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDL 222 (476)
T ss_pred HHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 4422 1 2344566777777776666666665443
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.16 E-value=1.1e-09 Score=90.02 Aligned_cols=133 Identities=18% Similarity=0.186 Sum_probs=93.4
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhH
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 359 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a 359 (434)
+..+++....+++.||+|||+.+..+.....+..+......+.+.................+..+.+..|.+|++.|+++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 44566778889999999999998877666655544433323222222222222222223355677888999999999999
Q ss_pred HhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 360 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 360 ~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
.++.+....++..++|.+.+.+.+..+....+.+.+.+.+++.+..+++.||+
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999998877765555566677777777777777777664
No 117
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.11 E-value=4.5e-09 Score=102.28 Aligned_cols=141 Identities=19% Similarity=0.133 Sum_probs=98.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
.....+...++.++.|.++||+|||+.+..+..+..+..+......+.+......+...+......+....+..|.+|++
T Consensus 46 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 125 (385)
T TIGR00710 46 LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGE 125 (385)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH
Confidence 33445667888999999999999999998877666655554443332222222111111122223455677889999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 415 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 415 (434)
.|+++.|+.+....++..++|.+.+.+.+..+....+++.+...++..+..++..||++.+
T Consensus 126 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 126 ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999888777766656666666777777766666666777544
No 118
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.08 E-value=1.2e-08 Score=100.46 Aligned_cols=137 Identities=9% Similarity=-0.027 Sum_probs=93.1
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...++..++.+..++++||+|||+.+..+.++..+.........+.......-+...+...+..+....+.+|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 130 (412)
T TIGR02332 51 LFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFR 130 (412)
T ss_pred HHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHH
Confidence 33456677888899999999999998887777665554444333222222211121122223345556778999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhh------cchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTS------CHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~------~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+++.|+.+....+|..+++.+.+.+.+. .+....+++.++..++..++.+++.||++
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 131 ARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 9999999999889999999888876532 34456666767666666666666667775
No 119
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.08 E-value=9.7e-09 Score=100.94 Aligned_cols=139 Identities=17% Similarity=0.135 Sum_probs=92.3
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
.....++..++.++.++++||+|||+.+..+.++..+..+......+.+.................+....+.+|.+|++
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 135 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR 135 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH
Confidence 34445677889999999999999999998877666554443333332222222222211222233455677889999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
.|+++.++.+....+|+.+++.+...+.+..+....+++.+++.++..+...+..||+.
T Consensus 136 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 136 LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999988999999887766655555455566656555555555555556764
No 120
>TIGR00895 2A0115 benzoate transport.
Probab=99.07 E-value=4.5e-09 Score=102.57 Aligned_cols=138 Identities=20% Similarity=0.143 Sum_probs=94.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+..+++.++.+.++||+|||+.+..+..+..+..+......+.+..........++.....+....+.+|.+|++.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34456678889999999999999999988776666554444333322222111111112222335667788999999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|+++.|+......+|+.++|.+.+.+.+..+....+++.+..+++..+..+...||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999998888777666555566665555665566666666653
No 121
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.07 E-value=1.1e-08 Score=101.72 Aligned_cols=128 Identities=16% Similarity=0.209 Sum_probs=84.4
Q ss_pred HHHhhhhhHHHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHhhh-hhhhhhhcccccCC
Q 013910 277 ITSFAELPGLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGT-FIIANIFAPEIYPT 353 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~-gRR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~El~P~ 353 (434)
.......++.+++|+++||+ |||+.++.+.++..+..+.+.... ........... ..+..+. .+....+.+|++|+
T Consensus 53 ~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~l-i~iG~G~~~~~~~alv~elfp~ 131 (493)
T PRK15462 53 AYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAI-IVCGYGLFKSNVSCLLGELYEP 131 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH-HHHhcccccccHHHHHHHHCCC
Confidence 33355677889999999999 999999888777665543332211 11111111111 1112232 24456788999998
Q ss_pred C--chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 013910 354 S--MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVI 405 (434)
Q Consensus 354 ~--~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 405 (434)
+ .|.+++++.++.+++|+.++|.+.+.+.+..|....+.+.++.++++.+..
T Consensus 132 ~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 132 TDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred CCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 6 799999999999999999999999988876666666666555444444433
No 122
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.07 E-value=1.2e-08 Score=90.91 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHH-HHh-hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHH
Q 013910 283 LPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLP-LVT-LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGA 360 (434)
Q Consensus 283 ~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~ 360 (434)
.+-..+.|.++||.||+..++.+..+..+..=. +.+ ..+++....+....- .......|-..+-+.|.+.-++|.
T Consensus 314 av~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsy---sllAcslWP~va~~vpE~qLGTay 390 (459)
T KOG4686|consen 314 AVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSY---SLLACSLWPCVASLVPEEQLGTAY 390 (459)
T ss_pred hhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhH---HHHHHHHhhhhhhhCCHHHhcchH
Confidence 344567889999999999888776555443211 111 122333322221110 111123577788889999999999
Q ss_pred hHHHHhhhHhHhhHHHHHHHHhhhcchh----hHHHHHHHHHHHHHHHHHhc
Q 013910 361 GVAYAVGRIGGMVCPLVAVGLVTSCHQT----AAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 361 gi~~~~~~ig~~~~p~~~~~l~~~~g~~----~~~~~~~~~~~i~~~~~~~~ 408 (434)
|.+.++.++|-.+.|++.+.+.|.-|++ ..++..+.+++++..+.+.+
T Consensus 391 gf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 391 GFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 9999999999999999999887754422 23344455555555555444
No 123
>PRK10054 putative transporter; Provisional
Probab=99.06 E-value=1.2e-08 Score=99.87 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=90.8
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...+..+++....|.++||+|||+.+..+.+...+..+...+.++.+.................+....+.+|.+|++.|
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 130 (395)
T PRK10054 51 IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSK 130 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHH
Confidence 33456677888999999999999988877766655444433333222221111111111112244567778899999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+++.|+.+....+|..++|.+.+.+.+ .+....+.+.+++.+++.+...+..||++
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999998887664 45556666666666666655555445554
No 124
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.06 E-value=9.2e-09 Score=100.65 Aligned_cols=140 Identities=15% Similarity=0.080 Sum_probs=95.4
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.++.|+++||+|||+.+..+.....+.........+.+....................+.+..|.+|++.
T Consensus 45 ~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 124 (392)
T PRK10473 45 SVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR 124 (392)
T ss_pred HHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH
Confidence 34445667788999999999999999988776666554444332222221111111111122234566778899999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 415 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 415 (434)
|+++.++.+....+++.++|.+.+.+.+..+....+.+.++++++..++.++..||++.+
T Consensus 125 r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 125 RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999998877666655555666777777777777666666777544
No 125
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.05 E-value=2.1e-08 Score=96.16 Aligned_cols=140 Identities=19% Similarity=0.111 Sum_probs=96.2
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
.....+...++.+..|.++||+|||+.+..+.++.++..+...+..+.+......+....+.....+....+..|.+|++
T Consensus 38 ~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~ 117 (352)
T PF07690_consen 38 FSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPE 117 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhh
Confidence 34455677889999999999999999888887777766333333222222222222222222344567788899999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
.|+++.++.+....+|..++|.+.+.+.+..+....+++.++.+++..++...+.++.+.
T Consensus 118 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 118 ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPP 177 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---ST
T ss_pred hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccc
Confidence 999999999999999999999998877766565667788888887777754444444433
No 126
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.05 E-value=2.6e-08 Score=97.60 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=94.5
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...+...++....+.++||+|||+.+..+.++.++..+......+.+.....-....+......+....+.+|.+|++.|
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~ 142 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTV 142 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHH
Confidence 34556677888999999999999999888777766544433333222222221222222223345667778999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+.+.++......++..++|.+.+.+.+..+....+++.+.++++..+......||++
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999988887666666666666666655555555456654
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.04 E-value=2.3e-08 Score=104.14 Aligned_cols=107 Identities=17% Similarity=0.127 Sum_probs=76.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....++.++|.+++|+++||+|||+.++++.++.++..+...+..+.+...+.-+...++..+..+..+.+.+|.+|++.
T Consensus 209 s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~ 288 (742)
T TIGR01299 209 LIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK 288 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 34457788999999999999999999988776666554444433222222222222223334456788999999999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
|+...++...+..+|+++++.+...+.
T Consensus 289 Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 289 RGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998898888887665444
No 128
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.03 E-value=7.1e-09 Score=100.78 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=97.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.++.|.++||+|||+.+..+.++.++.........+.+..........++.....+....+.+|.+|++.
T Consensus 36 ~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 115 (399)
T TIGR00893 36 SAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE 115 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH
Confidence 34556778889999999999999999888776666554444333322222222112222222334566788999999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
|+++.++......+|..++|.+.+.+.+..+....+.+.++..++..+..++..||++.
T Consensus 116 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 116 RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 99999999999999999999988877776666666777777777766666666666543
No 129
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.02 E-value=2.4e-08 Score=98.16 Aligned_cols=138 Identities=19% Similarity=0.084 Sum_probs=94.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...+...++..+.|.++||+|||+.+..+.....+..+......+.+......+..........+..+.+..|.+|++.|
T Consensus 56 ~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~ 135 (406)
T PRK15402 56 AYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADA 135 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHH
Confidence 44466778888999999999999998887766665544443333222211111111111112234566777899999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
..+.++......++..++|.+.+.+.+..+....+++.+++++++.+..++..||++.
T Consensus 136 ~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 136 IKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 9999999888888888999888877776565566777777777777766666677754
No 130
>PRK10504 putative transporter; Provisional
Probab=99.01 E-value=3.2e-08 Score=99.38 Aligned_cols=135 Identities=13% Similarity=0.044 Sum_probs=91.3
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhh
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 358 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~ 358 (434)
.++..++.++++.++||+|||+.+..+..+..+..+......+.+..........++.....+....+..|.+|++.|++
T Consensus 55 ~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (471)
T PRK10504 55 VLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMA 134 (471)
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHH
Confidence 45567788999999999999999887765555444333332222222111111112222334566777889999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 359 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 359 a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+.|+.+....++..++|.+.+.+.+..+....+.+...++.++.+......|+.+
T Consensus 135 ~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 135 AMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999999999988887666555666666666666666666655543
No 131
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.01 E-value=2.7e-08 Score=98.77 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=93.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.+++|+++||+|||+.+..+.++.++..+......+.+..........++....++....+.+|.+|++.
T Consensus 65 ~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 144 (434)
T PRK11663 65 TLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE 144 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence 34456677889999999999999999988877777665544433322222111111111222234556778899999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
|+++.|+.+....+|+.++|.+.+.+.+..+....+++.++++++..+...+..+|+
T Consensus 145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 145 RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999888887766666666666665555444444444453
No 132
>PRK03699 putative transporter; Provisional
Probab=99.01 E-value=6.4e-08 Score=94.84 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=85.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...++..++.+++++++||+|||+.+..+..+..+.........+.+......+....+.....+....+..|.+|++.|
T Consensus 50 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r 129 (394)
T PRK03699 50 FLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQR 129 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchH
Confidence 34566788899999999999999998887766655544433333322222221222122222334556778899999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHH
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVIL 406 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~ 406 (434)
+.+.+..+....+++.++|.+.+.+.+. .+....+.+.+++.++..++..
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888999888776653 3445566666665555544443
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.01 E-value=3.4e-08 Score=96.74 Aligned_cols=137 Identities=17% Similarity=0.124 Sum_probs=87.0
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.++.|.++||+|||+.+..+.++..+..+......+.+......+..........+....+..|.+|++.
T Consensus 54 ~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 133 (405)
T TIGR00891 54 SAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL 133 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh
Confidence 34456678889999999999999999988776666554444333222221111111112222334556778889999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|+.+.++.+....+|.++++.+.+.+.+..+ ....+.+.+...++. ++.....||++
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 9999999999999999999988877666544 333344333333333 33344446654
No 134
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.00 E-value=3.1e-08 Score=97.71 Aligned_cols=136 Identities=12% Similarity=0.049 Sum_probs=94.1
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhh
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 358 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~ 358 (434)
.++..++.+..|.++||+|||+.+..+..+..+..+......+.....+.-+...+.........+.+..|.+|++.|++
T Consensus 61 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 140 (413)
T PRK15403 61 LAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIK 140 (413)
T ss_pred HHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 35667788899999999999999988776666554444333322222221111111111223445677889999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 359 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 359 a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
+.++.+....++..++|.+.+.+.+..+....+++.++..+++.+...+..||++.
T Consensus 141 ~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 141 LMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999888877766566667777777777776666666678754
No 135
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.00 E-value=3.8e-08 Score=97.42 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=81.8
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.++.|+++||+|||+.+..+.++.++.........+.+.....-+...+...+.++....+..|.+|++.
T Consensus 60 ~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~ 139 (426)
T PRK12307 60 TAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL 139 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH
Confidence 34556778889999999999999999988877776655444333322222222122212222345666778899999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHH
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 393 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~ 393 (434)
|+++.|+......+|.+++|.+.+.+.+..+....+++
T Consensus 140 r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 140 KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 99999999988889999998888777665554444444
No 136
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.99 E-value=5.5e-08 Score=93.65 Aligned_cols=133 Identities=14% Similarity=0.048 Sum_probs=89.3
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-----SNILLTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
....+...++.++.|.++||+|||+.+..+..+..+......... +.+.................+....+.+|.
T Consensus 41 ~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 120 (365)
T TIGR00900 41 LAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDL 120 (365)
T ss_pred HHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566778889999999999999999887766554433332221 222221221121122223345667888999
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
+|++.|+++.|+.+....+|.+++|.+.+.+.+..+....+++.+...+++.+....+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 121 VPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999988887776665555666555555555554444
No 137
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.98 E-value=5.1e-08 Score=98.53 Aligned_cols=117 Identities=20% Similarity=0.172 Sum_probs=81.3
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...++..++.++.+.++||+|||+.+..+.++.++..+......+.+..........+...+.++....+..|.+|.+.|
T Consensus 63 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 142 (496)
T PRK03893 63 AAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLR 142 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 44566778899999999999999998887766665554444333222222222222222233455667788999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHH
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILL 393 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~ 393 (434)
+.+.++.+....+|+.++|.+.+.+.+..+....+.+
T Consensus 143 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 143 NKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 9999999999999999999998877765554444443
No 138
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.97 E-value=5.9e-08 Score=92.36 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=183.5
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcc------cHH--HHHHHHHHHHhcCCCchhhhhhh-hhccCCCcchhHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSP------NYI--SLLILRGLAGAGLGSGHVFFSWF-MEFVPPSNRGKWMVV 93 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~------~~~--~l~~~R~l~Gig~g~~~~~~~~~-~E~~p~~~Rg~~~~~ 93 (434)
|+.|+.|=|.+..++.++..++..+-..+. .+. ..+.+..+.+.+.--.....+=+ .=|+|+++|..+..+
T Consensus 101 w~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~ 180 (480)
T KOG2563|consen 101 WILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVL 180 (480)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhH
Confidence 689999999999999999999988765542 222 45566666655432111111222 356799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc------cchHHH--HHHH-HHHHHHHHHHHHhcCCChhHHhhcCChHHHHHHHHHHHH
Q 013910 94 FSTFWTFGSVSEAALAWIVMPI------LTWRWL--LALS-AIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILDKIAQ 164 (434)
Q Consensus 94 ~~~~~~~G~~l~~~l~~~~~~~------~~Wr~~--f~~~-~i~~~l~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~~ 164 (434)
-..+..+|..++.++...+.++ ..|-.. |... ++..+++.+..+..+|.|..--+ .+..
T Consensus 181 ~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps-----~s~~------- 248 (480)
T KOG2563|consen 181 GVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPS-----ASQA------- 248 (480)
T ss_pred HHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc-----hhHh-------
Confidence 9999999999888887776543 357663 4422 22222233333334443331000 0000
Q ss_pred HcCCCCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 165 FNQTSLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVL 244 (434)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (434)
+++ + .+-.++.+.+++.+ +..++...+..+...+|+...
T Consensus 249 -----------------------~~~-~--------------~~f~~si~~~~~n~---~F~il~~~ygi~~g~F~~l~~ 287 (480)
T KOG2563|consen 249 -----------------------ALQ-D--------------ASFPKSIKSCFKNR---QFIILAICYGIGLGLFNSLST 287 (480)
T ss_pred -----------------------hhh-c--------------CcHHHHHHHHHcCc---cHHHHHHHHhhhHHHHHHHHH
Confidence 000 0 00112333333332 233444555555555666554
Q ss_pred HHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHhhchh-HHHHHHHHHHHHHHHH-HHhh---
Q 013910 245 LASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDRVGRK-LSMTIMFIFVCIFLLP-LVTL--- 319 (434)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR-~~~~~~~~~~~~~~~~-~~~~--- 319 (434)
......... .+.. ........+..+.+.+|.+++|.+.||.+.= ...++......+.... ....
T Consensus 288 ~l~~~l~~s---------gY~~--~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~ 356 (480)
T KOG2563|consen 288 LLNLALCPS---------GYEG--VFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFL 356 (480)
T ss_pred Hhhhccccc---------cCCc--cccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 432111000 0010 1111223444567788999999999998653 3333333333222111 1111
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc----hhhHHHHHH
Q 013910 320 QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH----QTAAILLLE 395 (434)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g----~~~~~~~~~ 395 (434)
...++..........+..+..++..-+..|..=+..-++..|+.+..+.+.+++-.++.+...+..+ .....+.+.
T Consensus 357 ~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 436 (480)
T KOG2563|consen 357 GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLT 436 (480)
T ss_pred CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhH
Confidence 1111111111111122334455555566777666677888999999999999888888887665544 334456677
Q ss_pred HHHHHHHHHHHhcccccCCccccc
Q 013910 396 ALIVLSVVVILLIPFETKGKELVN 419 (434)
Q Consensus 396 ~~~~i~~~~~~~~~~et~~~~~~e 419 (434)
..+++...+..++.|+-+.+..++
T Consensus 437 ~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 437 VSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred HHHHHHHHHHhhhhhhHHhHhhhh
Confidence 777888888889988877665553
No 139
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.96 E-value=2.9e-08 Score=99.91 Aligned_cols=139 Identities=14% Similarity=0.037 Sum_probs=96.8
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....++..++..+.++++||+|||+.+..+.++..+..+......+............++.....+....+..|.+|++.
T Consensus 44 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~ 123 (485)
T TIGR00711 44 TSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK 123 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH
Confidence 34456778889999999999999999988877766655544433322222222222222222344667788899999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
|+++.++......+|..++|.+.+.+.+..+....+++.+...++..+...+..||.+.
T Consensus 124 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 124 RGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 99999999999999999999998888776665556666666666666666666666543
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=98.96 E-value=8e-08 Score=93.99 Aligned_cols=136 Identities=9% Similarity=0.016 Sum_probs=91.6
Q ss_pred HHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchh
Q 013910 278 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 357 (434)
Q Consensus 278 ~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~ 357 (434)
..+...++....+.+.||+|||+.+..+..+.++..+......+.+.................+....+.+|.+|++.|+
T Consensus 53 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~ 132 (390)
T PRK03545 53 YAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKA 132 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhh
Confidence 33455667788899999999999998887766655444433332222211111111111122345567788999999999
Q ss_pred hHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 358 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 358 ~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
++.|+......++..++|.+.+.+.+..+....+.+.++++++..+..+...||.+
T Consensus 133 ~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 133 QALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999998887777666666777777777666666555555543
No 141
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.95 E-value=2.8e-08 Score=96.56 Aligned_cols=138 Identities=14% Similarity=0.100 Sum_probs=96.6
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...+...++.+++|.++||+|||+.+..+.++..+.........+.+......+...++.....+....+..|.+|++.|
T Consensus 34 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 113 (377)
T PRK11102 34 AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEF 113 (377)
T ss_pred HHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 44566778899999999999999999888777666555444333222222222222222223344567788999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
+++.++.+....++..++|.+.+.+.+..+....+++.+.++++..+...+..||++.
T Consensus 114 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 114 SRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 9999999999999999999988887776665566677777777776666666667643
No 142
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.93 E-value=5.8e-09 Score=102.94 Aligned_cols=125 Identities=18% Similarity=0.176 Sum_probs=98.8
Q ss_pred hhhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc-c---cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHH
Q 013910 18 LLLEPLYFIFAFSRMSILGGALVTFVAGLLSAFS-P---NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMV 92 (434)
Q Consensus 18 ~~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~-~---~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~ 92 (434)
.+..+++.||+|||+.+..+.+...++..+.... + ++..+++.+++.|++.+... ....++.|..|+++||+..+
T Consensus 268 ~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g 347 (418)
T TIGR00889 268 ILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQG 347 (418)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 3566789999999999999999888876655553 2 34677889999999987653 34567889999999999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHHHHHHH-HHHHhcCCC
Q 013910 93 VFS-TFWTFGSVSEAALAWIVMPI------LTWRWLLALSAIPAFVLL-IFIVFMPES 142 (434)
Q Consensus 93 ~~~-~~~~~G~~l~~~l~~~~~~~------~~Wr~~f~~~~i~~~l~~-~~~~~lpES 142 (434)
+.+ ..+.+|..+++.+++.+.+. .|||..|.+.++..++.. +..++++|+
T Consensus 348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 997 67889999999998877554 579999998877766654 445567776
No 143
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.92 E-value=1.2e-08 Score=98.77 Aligned_cols=138 Identities=16% Similarity=0.131 Sum_probs=91.8
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.++.|+++||+|||+.+..+..+..+..+......+.+..........++.....+....+.+|.+|++.
T Consensus 37 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 116 (379)
T TIGR00881 37 SSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE 116 (379)
T ss_pred HHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh
Confidence 34456777889999999999999999988877766655544433322222222122112222334566778899999999
Q ss_pred hhhHHhHHHHhhhHhHhhHH-HHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 356 RSTGAGVAYAVGRIGGMVCP-LVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p-~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|+++.++.+....+|+.++| .+...+.+..+....+++.+.++++..+..+++.||++
T Consensus 117 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 117 RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred heeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 99999999999999999998 44444444444455566666666666566666555543
No 144
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.90 E-value=8.5e-08 Score=96.21 Aligned_cols=172 Identities=17% Similarity=0.102 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccccCccchhHHHHHHHHHhhhhhHHHHHHHHHHh-hchhHHHHHHH
Q 013910 228 LWVLYFGNSFVYYGIVLLASELSGSQSKCSSSILLSENVQDASVYINVFITSFAELPGLLTAALLVDR-VGRKLSMTIMF 306 (434)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~dr-~gRR~~~~~~~ 306 (434)
+....+.+.+.+|+..-+.+.+..... ..+.+................++.+++|+++|| +|||+.+..+.
T Consensus 15 l~~~~~~~~~~~~~~~~~L~~yl~~~~--------~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~ 86 (475)
T TIGR00924 15 LFFVELWERFSYYGMQGILAVYLVQQA--------GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGG 86 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHH
Confidence 444555567777776555444432110 001111222223334456678899999999999 89999999888
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc---hhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 307 IFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM---RSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~---R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
++.++..+.+....+.............+.....+....+.+|.+|++. |+++.++.+...++|+.++|.+.+.+.+
T Consensus 87 ~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 87 IVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 7777655544433222221111111111111223455677889998754 8899999999999999999999998877
Q ss_pred hcchhhHHHHHHHHHHHHHHHHHh
Q 013910 384 SCHQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 384 ~~g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
..+....+.+.++.++++.+...+
T Consensus 167 ~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 167 NYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHH
Confidence 666555666655555555444433
No 145
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.88 E-value=1.9e-07 Score=91.40 Aligned_cols=139 Identities=17% Similarity=0.032 Sum_probs=89.4
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++..+.|.++||+|||+.+..+.....+..+......+.+..........++.....+....+..|.+|.+.
T Consensus 50 ~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 129 (394)
T PRK11652 50 AAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ 129 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH
Confidence 34456677888999999999999999888766665544443332222221111111111111223445567788999889
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
|+.+.++.+....++..++|.+.+.+.+..+....+.+.++..++..+...+..||++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 130 LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999988888888888899888877765565566666666555555555555667643
No 146
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.87 E-value=1.4e-06 Score=86.11 Aligned_cols=308 Identities=18% Similarity=0.167 Sum_probs=169.3
Q ss_pred hhhhhhh---hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCc---hhhhhhhhhccCCCcchh
Q 013910 16 PKLLLEP---LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSG---HVFFSWFMEFVPPSNRGK 89 (434)
Q Consensus 16 ~~~~~~~---~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~---~~~~~~~~E~~p~~~Rg~ 89 (434)
+-++-.| -++||+|||..+.+......+..++..+.. ++.++ +.|+.-+.. ....+|+++.+..++|..
T Consensus 74 ~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 74 LTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 4444445 389999999999999998888887776666 22222 566543322 345678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHhhcCChHHHHHHHHHHHHHcCC
Q 013910 90 WMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPESPRYLCTKGRITDAHNILDKIAQFNQT 168 (434)
Q Consensus 90 ~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpESp~~l~~~~~~~~a~~~l~~~~~~~~~ 168 (434)
..++....+..+..+++.++.......+.=.+|.+..+..++..+ .+..+|||-+- +.+.+
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~--------------- 210 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE---KERSD--------------- 210 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc---ccccc---------------
Confidence 999999999999999999988877777888888888887777644 56679998541 10000
Q ss_pred CCCCCCccCCCCCCCcccccCCCCccccccccccccccccccchhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013910 169 SLPSGNLTSDGTNDLDEEFSTSEETPLLSSARKRTTVRKSGFSSFLMLFSPRFFKTTILLWVLYFGNSFVYYGIVLLASE 248 (434)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 248 (434)
.+.. +.+......+.. .+ .+......+..|..+.+....+ +.+ .+.
T Consensus 211 ----~~~~---~~~~~~~~~~~~---------------~~---~~~~~~~~~~~r~~l~l~l~~~---~~~------~~~ 256 (463)
T KOG2816|consen 211 ----ATLR---ELTPGSLDSSHV---------------AD---AFQSLTKVGPDRLLLLLLLVAF---LSS------LPE 256 (463)
T ss_pred ----cccc---ccCCCcccchhh---------------hh---hhhhhcccCCCccchHHHHHHH---HHH------HHH
Confidence 0000 000000000000 00 0001111111111111111111 001 111
Q ss_pred hhcccCCCCcccccccCccchhHHH-HHHHHHhhhhhHHHHHH-HHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 013910 249 LSGSQSKCSSSILLSENVQDASVYI-NVFITSFAELPGLLTAA-LLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLT 326 (434)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~-~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (434)
..... ...-..+......+...+. .....+..+.++.++.. .+...+|-|+....+...-.+......+....|...
T Consensus 257 ~~~~~-~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~ 335 (463)
T KOG2816|consen 257 AGGAS-DVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMF 335 (463)
T ss_pred hcCce-eEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhh
Confidence 11000 0000000000111112222 12233344555666655 777788888866666555554444444433333211
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 327 ALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
...... .+.....+....+.+-...++.++++.++...+..+.++++|.+...+.
T Consensus 336 ~~~v~~-~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 336 AAGVVV-ALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHHHHH-HhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 111111 1122345666777788888999999999999999999999998887664
No 147
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.87 E-value=2.7e-07 Score=93.30 Aligned_cols=136 Identities=17% Similarity=0.045 Sum_probs=90.2
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccc-cCCCchh
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEI-YPTSMRS 357 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El-~P~~~R~ 357 (434)
.+....+.+..|.++||+|||+.+..+..+..+..+......+.+...+.-....+...+..+.......+. .|++.|+
T Consensus 51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~ 130 (495)
T PRK14995 51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRN 130 (495)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 344456678899999999999999988777766555444333322222211111112222233334444454 4779999
Q ss_pred hHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 358 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 358 ~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
++.|+......+|..++|.+.+.+.+..+..+.+++...++++..++.+++.||.++
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999988887666666766666666666666666677543
No 148
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.86 E-value=1.2e-07 Score=91.76 Aligned_cols=136 Identities=13% Similarity=-0.011 Sum_probs=88.2
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...++..++.+..|+++||+|||+++..+...............+.......-+.. ....+.........+|.+|++.|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~-G~g~~~~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLA-ALGQPFLLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH-HhHhHHHHHHHHHHHHHcCHHHH
Confidence 33456678889999999999999876554333322221111111111111111111 11122333445556899999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+++.++......+|+.+++.+.+.+.+..+....+++.+++.++..+..++..||..
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999988888877666666677777777777777777777754
No 149
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.86 E-value=1.7e-07 Score=91.39 Aligned_cols=138 Identities=11% Similarity=0.031 Sum_probs=94.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....++..++..+.|+++||+|||+.+..+..+.++..+......+.+......+...++.....+....+..|.+|++.
T Consensus 45 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 124 (382)
T PRK10091 45 SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH
Confidence 34456778899999999999999999998877777655544443332222222111111111223445567789999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|+.+.++......++..++|.+.+.+.+..+....+.+.+...++..+..++..||.+
T Consensus 125 ~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 125 VTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999888888888888888777766656566677767666666666666667754
No 150
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.85 E-value=3.1e-07 Score=90.17 Aligned_cols=133 Identities=11% Similarity=-0.020 Sum_probs=88.1
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhh
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 358 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~ 358 (434)
.+.......++|.++||+|||+.+..+..+..+..+......+.+.................+....+..|.+|++.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34445556788999999999999988877777665554443332222221111111111223445677889999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 359 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 359 a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
+.|+.+....+|..++|.+.+.+. ..+....+.+.+..+++..+......||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999988776 44555566666666555555544455554
No 151
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.84 E-value=2.6e-07 Score=89.30 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=72.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-SNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
....+...++.+++|.++||+|||+.+..+.++..+..+...... +.+.......... ...+.+.....+.+|.+|++
T Consensus 44 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 122 (366)
T TIGR00886 44 AVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG-IAGGSFASCMPWISFFFPKK 122 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HhchhhHhHHHHHHHhcCHh
Confidence 344567788999999999999999999888777766554443333 2222111111111 11233445566788999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
.|+++.++......+|..+++.+.+.+..
T Consensus 123 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 123 IQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999998888888777776665443
No 152
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.83 E-value=2.2e-07 Score=92.77 Aligned_cols=138 Identities=14% Similarity=0.042 Sum_probs=83.9
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----SNILLTALLSGARMFSMGTFIIANIFAPEIY 351 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 351 (434)
....+...++.+++|.++||+|||+.+..+.++.++..+...... +............++....++.......|.+
T Consensus 70 ~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~ 149 (452)
T PRK11273 70 SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW 149 (452)
T ss_pred HHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhC
Confidence 344566778899999999999999999888776665554443221 1111111111111222222344455677999
Q ss_pred CCCchhhHHhHHHHhhhHhHh-hHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 352 PTSMRSTGAGVAYAVGRIGGM-VCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 352 P~~~R~~a~gi~~~~~~ig~~-~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|++.|+++.|+.+....+|+. .+|.+...+....+....+++.++++++..++.+++.||+.
T Consensus 150 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 150 SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 999999999998888888764 45543322222224445666666666666566656556653
No 153
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.81 E-value=1.9e-06 Score=82.69 Aligned_cols=124 Identities=15% Similarity=0.176 Sum_probs=102.5
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTF 100 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~ 100 (434)
....+|..|-|+++++..+...+...+..+.++...+-+..+.-|++.+...+.++|+--..|+++--++.+....+.-.
T Consensus 61 vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~ 140 (412)
T PF01770_consen 61 VFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLV 140 (412)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHH
Confidence 33589999999999999999999999999999999999999999999988877778877777888888889999999999
Q ss_pred HHHHHHHHHHHHhc--ccchHHHHHHHHHHHHHHHHHHHhcCCChh
Q 013910 101 GSVSEAALAWIVMP--ILTWRWLLALSAIPAFVLLIFIVFMPESPR 144 (434)
Q Consensus 101 G~~l~~~l~~~~~~--~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~ 144 (434)
|..++++++..+.. ..+.+.+..+......+..+..+++|-.++
T Consensus 141 g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 141 GRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999888887654 456777777776655555566677776554
No 154
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.81 E-value=1.9e-07 Score=92.91 Aligned_cols=138 Identities=16% Similarity=0.087 Sum_probs=88.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh---hhHH-HHHHHHHHHHHHhhhhhhhhhhccccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNIL-LTALLSGARMFSMGTFIIANIFAPEIY 351 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~ 351 (434)
....++..++.++.|+++||+|||+.+..+.++.++..+...... ++.. .........++....++.......|.+
T Consensus 68 ~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~ 147 (438)
T TIGR00712 68 SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW 147 (438)
T ss_pred HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhc
Confidence 344566778899999999999999988877666665544332211 1111 111111111111122344556677999
Q ss_pred CCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 352 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 352 P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|++.|+++.|+.+....+++.++|.+.+...+. .+....+++.++++++..+..+++.||+.
T Consensus 148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 999999999999999999988888776654442 34455667777777776666666666653
No 155
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.81 E-value=5.4e-07 Score=88.54 Aligned_cols=135 Identities=19% Similarity=0.125 Sum_probs=91.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
+..+...++..+.|.++||+|||+.+..+.....+..+......+.+..........+ ..+..+....+..|.+|++.|
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~ 140 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGL-LGGFVPNANALIATQVPRNKS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-hhhhHHhHHHHHHHhcCHhhh
Confidence 4445667788889999999999999888766665544433332222221111111111 123334455667789999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
+.+.|+.+....+|.+++|.+.+.+.+..+....+.+.+++.++..+...++.||.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999998999999999988877766656667777777777766666665554
No 156
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.80 E-value=4.5e-08 Score=95.90 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=95.7
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
++..++.||+|||+.+..+.....+........++...+++.|++.+++.|... ....+..|..|. +||+..++++..
T Consensus 270 ~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~ 348 (393)
T PRK15011 270 LIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNT 348 (393)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHH
Confidence 345678999999998887766555544444556788888899999888766532 334567898875 599999999999
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCC
Q 013910 98 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPE 141 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpE 141 (434)
..+|..+++.++..+.+..+|+..|.+..++.++..+..+++||
T Consensus 349 ~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 349 SRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999988888889999999988888877776666665
No 157
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.80 E-value=1.9e-08 Score=99.42 Aligned_cols=124 Identities=12% Similarity=0.064 Sum_probs=98.7
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH-HHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV-FST 96 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~-~~~ 96 (434)
+..+++.||+|||+.+..+.++..++.++.++++|...+++.+++.|++.+... ....++.|..|++.|+...+. ++.
T Consensus 280 ~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 359 (420)
T PRK09528 280 FFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQF 359 (420)
T ss_pred HHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHH
Confidence 345679999999999999999888888888889999999999999998776543 344677899999999987654 677
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH-HHHhcCCC
Q 013910 97 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI-FIVFMPES 142 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~-~~~~lpES 142 (434)
...+|.++++.+.+.+.+..|||..|...++..++..+ .+..+++.
T Consensus 360 ~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 360 AKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 78899999999988888888999999987776655433 33444443
No 158
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.80 E-value=2.9e-07 Score=88.95 Aligned_cols=137 Identities=14% Similarity=0.062 Sum_probs=85.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
......++..++.+..|.++||+|||+.+..+.++.++..+......+.+................+........|.+|
T Consensus 43 ~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 121 (377)
T TIGR00890 43 WFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP- 121 (377)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-
Confidence 3345556778899999999999999999988877766655544433322222111111111111223334445667777
Q ss_pred CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccc
Q 013910 354 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFE 411 (434)
Q Consensus 354 ~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~e 411 (434)
+.|+++.++......+|..+.+.+...+.+..+....+++.++.+++..+..+++.+|
T Consensus 122 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 122 DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 4699999999888888877766555555554455566677777766666666555443
No 159
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.79 E-value=4.3e-08 Score=96.14 Aligned_cols=121 Identities=20% Similarity=0.145 Sum_probs=98.7
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWT 99 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~ 99 (434)
.+++.||+|||+.+..+..+..++.++..+.+|...+++.+++.|++.+... .......|..|+++||+..++++....
T Consensus 269 ~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (399)
T PRK05122 269 FGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLD 348 (399)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3568899999999988888888877777788888888999999999887643 334456799999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCC
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPE 141 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpE 141 (434)
+|..+++.+...+.+..||++.|.+.++..++..+....+++
T Consensus 349 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 349 LSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999888888777777789999999888777766555544443
No 160
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.78 E-value=2.8e-07 Score=88.06 Aligned_cols=133 Identities=23% Similarity=0.195 Sum_probs=90.8
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
.....+...++..+.|.++||+|||+.+..+..+..+..+......+.+.................+....+..|.+|++
T Consensus 40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 119 (352)
T cd06174 40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK 119 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc
Confidence 34455677889999999999999999888877777665554443322222211111111112223456678889999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
.|+++.++.+....+|..++|.+.+.+.+..+....+.+.+...++..+...+
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 120 ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLF 172 (352)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877655555555555555555544433
No 161
>PRK11043 putative transporter; Provisional
Probab=98.76 E-value=7.5e-07 Score=87.42 Aligned_cols=137 Identities=17% Similarity=0.100 Sum_probs=90.3
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
.+..+...++.+++|.++||+|||+.+..+..+..+..+......+.+......+...+...........+..|.+|.+.
T Consensus 48 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 127 (401)
T PRK11043 48 SLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK 127 (401)
T ss_pred HHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH
Confidence 34456677899999999999999999888776665544433332222221111111111111222334566789999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
|..+.+..+....+++.++|.+.+.+.+..+....+.+.+.+.++..+...+++++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 128 ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999988888899999999988887766666666666666666666665665443
No 162
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.74 E-value=1.3e-06 Score=88.62 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=73.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHhhhhhhhhhhc
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS------NILLTALLSGARMFSMGTFIIANIFA 347 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (434)
......++.++|.+++++++||+|||+.+..+.++..+..+......+ .......-+...++..+.++....+.
T Consensus 61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 140 (502)
T TIGR00887 61 VNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIIT 140 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 344556778899999999999999999988776666554433332111 11111111222222333456778999
Q ss_pred ccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHH
Q 013910 348 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL 381 (434)
Q Consensus 348 ~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l 381 (434)
+|.+|++.|+++.++.+....+|..+++.+...+
T Consensus 141 ~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 141 SEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888877766543
No 163
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.74 E-value=5.8e-07 Score=90.39 Aligned_cols=123 Identities=12% Similarity=0.031 Sum_probs=78.3
Q ss_pred hhHHHHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC--chhh
Q 013910 283 LPGLLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTS--MRST 358 (434)
Q Consensus 283 ~~g~~~~~~l~dr-~gRR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~--~R~~ 358 (434)
.....++|+++|| +|||+++..+.++..+..+......+ ...................+....+.+|.+|++ .|..
T Consensus 64 ~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~ 143 (489)
T PRK10207 64 YGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDG 143 (489)
T ss_pred HHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhc
Confidence 3445689999999 99999999988777765544433221 111111111111111122345567889999987 4578
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 013910 359 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVIL 406 (434)
Q Consensus 359 a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 406 (434)
++++.+...++|+.++|.+.+++.+..|....+++.++ .++..++.+
T Consensus 144 ~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~ 190 (489)
T PRK10207 144 AFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVY 190 (489)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHH
Confidence 89999999999999999999988877665555555333 333333333
No 164
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.73 E-value=1.2e-06 Score=85.76 Aligned_cols=132 Identities=11% Similarity=-0.046 Sum_probs=85.5
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...+...+...++|.++||+|||+++..+..+..+..+......+. . ..............+....+.+|++|++.|
T Consensus 46 ~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~--~-~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~ 122 (393)
T PRK11195 46 FFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP--L-LAYGLVGIGAAAYSPAKYGILTELLPGEKL 122 (393)
T ss_pred HHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 3345667788899999999999999988877665543332222221 1 111112222334456778899999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+++.|+......++.+++|.+.+.+.+.. ....+.+.+.+.+++. +..+..||.+
T Consensus 123 ~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 123 VKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 99999999999899999999998877743 2233333333333333 3334556654
No 165
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.73 E-value=2.5e-06 Score=84.15 Aligned_cols=138 Identities=12% Similarity=0.049 Sum_probs=85.4
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL-----QSNILLTALLSGARMFSMGTFIIANIFAP 348 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (434)
...+..+...++.+..|.+.||+|.|+....+..+..+..+...+. .+.......-....+ ..+.++......+
T Consensus 75 l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gi-gg~~f~~~~~~vs 153 (462)
T PRK15034 75 LTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGF-AGANFASSMGNIS 153 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHH-HHHhHHHHHHHHH
Confidence 3334455556777788999999999998888877766555444432 111111111111111 2334566677789
Q ss_pred cccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh-----hhc-------------chhhHHHHHHHHHHHHHHHHHhccc
Q 013910 349 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV-----TSC-------------HQTAAILLLEALIVLSVVVILLIPF 410 (434)
Q Consensus 349 El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~-----~~~-------------g~~~~~~~~~~~~~i~~~~~~~~~~ 410 (434)
+.||++.|+++.|+....+++|..+++++.+.+. ... +.....+++....++..+..+++.+
T Consensus 154 ~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 154 FFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999998888888877766665433 111 1223344666666666666666555
Q ss_pred cc
Q 013910 411 ET 412 (434)
Q Consensus 411 et 412 (434)
+.
T Consensus 234 ~~ 235 (462)
T PRK15034 234 DI 235 (462)
T ss_pred Cc
Confidence 54
No 166
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.71 E-value=6.8e-07 Score=88.26 Aligned_cols=137 Identities=15% Similarity=0.098 Sum_probs=86.0
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---h-hhhh-HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---T-LQSN-ILLTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
....+..+++.++.|.++||+|||+.+..+..+.++....+. + ..++ +..........++.....+....+.+|.
T Consensus 59 ~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 138 (417)
T PRK10489 59 TLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPAL 138 (417)
T ss_pred HHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 344566778889999999999999988776555544332221 1 1111 1111111111111112234456678899
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
.|++.|+++.++.+....+|..++|.+.+.+.+..+....+.+.++..+++.+....+ ||++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~ 200 (417)
T PRK10489 139 VGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PALP 200 (417)
T ss_pred cCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCCC
Confidence 9999999999999999999999999988887776555555555555555555444444 5543
No 167
>PRK12382 putative transporter; Provisional
Probab=98.71 E-value=8.1e-08 Score=93.98 Aligned_cols=117 Identities=20% Similarity=0.083 Sum_probs=98.8
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
..+++.||+|||+.+..+..+..++.++..+.++...+++++++.|++.+... .......|.+|+++||+..++++...
T Consensus 268 ~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 347 (392)
T PRK12382 268 LFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQ 347 (392)
T ss_pred HHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 34568999999999999988888888777888888888999999999887643 34456779999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q 013910 99 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI 136 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~ 136 (434)
.+|..+++.+...+.+..||+..|.+.++..++..+..
T Consensus 348 ~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 348 DIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 99999999998888888899999999887776654443
No 168
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.70 E-value=1e-06 Score=88.98 Aligned_cols=116 Identities=12% Similarity=0.033 Sum_probs=72.9
Q ss_pred HHHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHhhhhhhhhhhcccccCCCc--hhhHHh
Q 013910 286 LLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQSNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSM--RSTGAG 361 (434)
Q Consensus 286 ~~~~~~l~dr-~gRR~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~--R~~a~g 361 (434)
..++|+++|| +|||+.+..+.++..+.........+.. ..........+......+....+.+|.+|++. |..+.+
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~ 153 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT 153 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence 3578999999 5999999888776665544333322111 11111111111111123445677899998643 456788
Q ss_pred HHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 013910 362 VAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLS 401 (434)
Q Consensus 362 i~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~ 401 (434)
+.+...++|+.++|.+.+++.+..|....+.+.++...++
T Consensus 154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 8899999999999999998888766655665555433443
No 169
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.69 E-value=1.8e-06 Score=87.05 Aligned_cols=138 Identities=19% Similarity=0.107 Sum_probs=90.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---hh--hhhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TL--QSNILLTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
....+-.++-.+.+|.+.||+.||+.++.+-++..+....+. .. .+.+....+.+....+.....+...++.+|+
T Consensus 52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~l 131 (524)
T PF05977_consen 52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPEL 131 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333445556677899999999999999887666554332221 11 1222222222222222223346677889999
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
.|.+.-..|+++.....++..+++|.+.+.++...|....+.+-+++.++........+++.+
T Consensus 132 V~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~ 194 (524)
T PF05977_consen 132 VPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP 194 (524)
T ss_pred ccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 999999999999999999999999999998887666655666655555555555555554443
No 170
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.68 E-value=3.6e-07 Score=91.29 Aligned_cols=138 Identities=20% Similarity=0.086 Sum_probs=86.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMGTFIIANIFAPEIY 351 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 351 (434)
.....++..++.++.|.++||+|||+.++.+.++..+..+...... .+ +..........+......+....+.+|.+
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 156 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA 156 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC
Confidence 3455577788999999999999999998887766655444332211 11 11111111111222233456778889999
Q ss_pred CCCchhhHHhHHHHhhhHhHhhHHHHH---HHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 352 PTSMRSTGAGVAYAVGRIGGMVCPLVA---VGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 352 P~~~R~~a~gi~~~~~~ig~~~~p~~~---~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|++.|+.+.++.+....+|..+++.+. ....+..+....+.+.+...++..+ ..++.||+.
T Consensus 157 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~-~~~~l~~~~ 220 (481)
T TIGR00879 157 PKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFL-GLFFLPESP 220 (481)
T ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCCh
Confidence 999999999999999999999999877 3222333444455554444444433 344456753
No 171
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.66 E-value=2.6e-07 Score=87.46 Aligned_cols=138 Identities=17% Similarity=0.122 Sum_probs=106.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
...++..-++-.+.|.++||.+.|..+..+.++++++.+.+.+..+.....++......+-...++.+.-..+.-||++.
T Consensus 71 s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e 150 (448)
T COG2271 71 SAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE 150 (448)
T ss_pred HHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc
Confidence 34445667888999999999999999999999999888877765543333333333333322335777888889999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHH--HHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVA--VGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~--~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|++..++=+...++|+.+.|.+. ..+.+..+....+++-++++++.+++.+++.+|+-
T Consensus 151 RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 151 RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999988888 66666656667888999988888888888775543
No 172
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.66 E-value=4.4e-07 Score=92.39 Aligned_cols=135 Identities=17% Similarity=0.183 Sum_probs=98.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
..+..++.++|.++.|.++||+|||+++..+.++..++.+...+..+-.....+-+...++..+.....+++.+|+++++
T Consensus 124 ~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~ 203 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK 203 (521)
T ss_pred HHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcc
Confidence 34445677889999999999999999999998888877766555554444444445555556677888999999999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
.|+.+..+ ..+.+.++...+....++.. +....+++.....++..+. ++++||.+
T Consensus 204 ~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 204 QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 99999999 88888888888888777665 2233344444444444333 66666764
No 173
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.65 E-value=3.3e-07 Score=91.91 Aligned_cols=135 Identities=10% Similarity=0.021 Sum_probs=93.2
Q ss_pred HHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 278 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 278 ~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
..++..++.+.+|+++||+|||+.+..+.++.++..+..... .........-+...+.....++....+.+|.+|++.
T Consensus 85 ~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~ 164 (465)
T TIGR00894 85 HFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE 164 (465)
T ss_pred HHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH
Confidence 345677888999999999999999988777666554433221 111111111111112222335667788999999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
|+++.|+......+|.+++|.+.+.+.+. .+....+++.++..++..+..+.+++|.
T Consensus 165 r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 165 RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999998888776 3666677777777666666666655543
No 174
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.63 E-value=2.9e-06 Score=82.69 Aligned_cols=110 Identities=14% Similarity=-0.013 Sum_probs=72.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
.....++..++.++.+.++||+|||+.+..+..+..+.........+.+.................+.......+..|++
T Consensus 47 ~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (381)
T PRK03633 47 SSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR 126 (381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 34445677888999999999999999998877776665544433332222222111111111122233334456778888
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
.|+++.+..+....+|..++|.+.+.+.+.
T Consensus 127 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 127 NRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999888766543
No 175
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.62 E-value=2.2e-06 Score=85.69 Aligned_cols=130 Identities=15% Similarity=0.051 Sum_probs=83.6
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhh-hhhhhhhcccccCCCchhh
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGT-FIIANIFAPEIYPTSMRST 358 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~El~P~~~R~~ 358 (434)
+...++..+.|+++||+|||+.++.+.++..+..+...+..+.+...........+..+. ......+..|.+| +.|++
T Consensus 65 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~ 143 (455)
T TIGR00892 65 AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPL 143 (455)
T ss_pred HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHH
Confidence 344566778999999999999888876666554443333222121111110010111121 2344456678886 67999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 013910 359 GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 410 (434)
Q Consensus 359 a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 410 (434)
+.|+.+....+|+.++|.+.+.+.+..+....+++.+++++++.+...++.+
T Consensus 144 a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 144 ANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988888887767667777777766665555544443
No 176
>TIGR00898 2A0119 cation transport protein.
Probab=98.62 E-value=8.1e-07 Score=90.04 Aligned_cols=133 Identities=17% Similarity=0.096 Sum_probs=88.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
.+..++.++|.++.|.++||+|||+.+..+.++..+..+...+..+.+...+..+...+...+..+....+.+|.+|.+.
T Consensus 134 s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~ 213 (505)
T TIGR00898 134 SCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ 213 (505)
T ss_pred HHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh
Confidence 34456778899999999999999999988877776655544443332222222222222233346778889999999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
|+.+.++......+|.+++|.+...+.+ ....+++.++..++..+.. ++.||+
T Consensus 214 r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 214 RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 9999999877777788777776543332 3345555666666665555 445675
No 177
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.61 E-value=2.6e-07 Score=89.62 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=95.4
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
++.+++.||+|||+.+.++.....+......+.++...+.+.+++.|++.|... ....+..|..|+ +|+...++++..
T Consensus 253 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 331 (375)
T TIGR00899 253 LLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNT 331 (375)
T ss_pred HhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHH
Confidence 345679999999999888777665555555566788888889999998877643 445677788875 567999999999
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCC
Q 013910 98 WTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPE 141 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpE 141 (434)
..+|..+++.+...+.+..+|+..|.+.++..++..+...+++|
T Consensus 332 ~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 332 GRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 99999999999888888889999999988877776665555543
No 178
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.61 E-value=6.9e-07 Score=89.62 Aligned_cols=134 Identities=16% Similarity=0.031 Sum_probs=84.2
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT-----LQSNILLTALLSGARMFSMGTFIIANIFAPEIY 351 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 351 (434)
...+...++.+++|+++||+|||+.+..+.++.++..+.... ..+............++....++....+.+|.+
T Consensus 72 ~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (467)
T PRK09556 72 GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT 151 (467)
T ss_pred HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc
Confidence 344666788899999999999999988877666654443322 111111111111111222223456667889999
Q ss_pred CCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhc---chhhHHHHHHHHHHHHHHHHHhccc
Q 013910 352 PTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC---HQTAAILLLEALIVLSVVVILLIPF 410 (434)
Q Consensus 352 P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~---g~~~~~~~~~~~~~i~~~~~~~~~~ 410 (434)
|++.|+++.|+....+.+|+++++.+...+.... +....+.+.++..++.++..+++.+
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~ 213 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGS 213 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999888776554432 1223345555555555455555433
No 179
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.60 E-value=4.2e-06 Score=83.06 Aligned_cols=136 Identities=20% Similarity=0.120 Sum_probs=79.6
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh-h-------HHHHHHHHHHHHHHhhhhhhhhhhcc
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-N-------ILLTALLSGARMFSMGTFIIANIFAP 348 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (434)
...++..+|.+++|+++||+|||+.+..+.....+..+...+..+ . ......-+...+...+.++....+.+
T Consensus 71 ~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~ 150 (432)
T PRK10406 71 AGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMS 150 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHH
Confidence 334556689999999999999999998887777665554433211 1 01111111111222234567788999
Q ss_pred cccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh--------hhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 349 EIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 349 El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~--------~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
|.+|++.|+.+.++.......|.++++.+...+. +..|....+++-++..++. ++.....||++
T Consensus 151 e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~ 222 (432)
T PRK10406 151 EVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETS 222 (432)
T ss_pred HhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 9999999999988876655555555554433222 1234444555444444443 33334456654
No 180
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.60 E-value=1.4e-06 Score=87.53 Aligned_cols=137 Identities=14% Similarity=0.034 Sum_probs=84.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh---------hhhH--H-HHHHHHHHHHHHhhhhhhh
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL---------QSNI--L-LTALLSGARMFSMGTFIIA 343 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~---------~~~~--~-~~~~~~~~~~~~~~~~~~~ 343 (434)
....++..++.++.|+++||+|||+.+..+..+..+..+..... .+.. . ....-....+...+..+..
T Consensus 62 s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~ 141 (479)
T PRK10077 62 ASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLS 141 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHH
Confidence 34456778899999999999999999988766655443322210 0111 1 1111111122223345667
Q ss_pred hhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh--------hhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 344 NIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV--------TSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 344 ~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~--------~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
..+.+|.+|++.|+++.++......+|..+++.+...+. +..+....+++.++..++..+. .++.||+.
T Consensus 142 ~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 142 PMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 788999999999999999988887888877776544332 1223344555555555555444 44557764
No 181
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.58 E-value=5.9e-06 Score=79.00 Aligned_cols=133 Identities=16% Similarity=0.123 Sum_probs=98.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
...++..++..+-..++||+.||++++..+.+..+..+......+ ......-... .+.....+++...+.+++.|++.
T Consensus 56 ~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~-g~a~G~f~~i~~~~a~~lvpp~~ 134 (394)
T COG2814 56 AYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALA-GLAHGVFWSIAAALAARLVPPGK 134 (394)
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCccc
Confidence 344666778888889999999999998776666554443332221 1121111222 22233456788889999999999
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 410 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 410 (434)
|++|.++...-..++.+++.-+..++-|..|...+|.+.+.+.+++.+..+...|
T Consensus 135 ~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 135 RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999888888887767777778788888999999999999999998888
No 182
>PRK15075 citrate-proton symporter; Provisional
Probab=98.57 E-value=4.5e-06 Score=82.90 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=64.2
Q ss_pred hhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 282 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNIL--------LTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 282 ~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
..+|.++.|+++||+|||+.++.+..+.++......+..+... ..+.-+...+.....++....+.+|.+|+
T Consensus 69 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 69 RPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred hhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 3468889999999999999998887766655444433222110 01111111111112244556789999999
Q ss_pred CchhhHHhHHHHhhhHhHhhHHHHHHH
Q 013910 354 SMRSTGAGVAYAVGRIGGMVCPLVAVG 380 (434)
Q Consensus 354 ~~R~~a~gi~~~~~~ig~~~~p~~~~~ 380 (434)
+.|+++.++.....+++..+++.+.+.
T Consensus 149 ~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 149 GRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988877777666655443
No 183
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.55 E-value=5.9e-06 Score=78.46 Aligned_cols=143 Identities=17% Similarity=0.152 Sum_probs=99.4
Q ss_pred cchhHHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHH--Hhhhhhh
Q 013910 267 QDASVYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNILLTALLSGARMF--SMGTFII 342 (434)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~ 342 (434)
+....+....+..+.+.+..+.-+++.||+|.|+....++++..+-.+.+.+. +...+. ++..+.++ ..+-+..
T Consensus 47 S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~--ll~~gll~G~~GasFav 124 (417)
T COG2223 47 SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQ--LLVIGLLLGLAGASFAV 124 (417)
T ss_pred CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHH--HHHHHHHHhcccceehc
Confidence 33445566667777777888889999999999999888877766544444332 221111 11112111 2233566
Q ss_pred hhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHHHhccccc
Q 013910 343 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH---QTAAILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 343 ~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g---~~~~~~~~~~~~~i~~~~~~~~~~et 412 (434)
.-...++-||++.+++|+|+.. .|++|..+..++.|.+....+ .+....++....++.++..++...|.
T Consensus 125 ~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 125 GMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred ccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6778899999999999999999 999999999999988877666 45566677777777677766665443
No 184
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.55 E-value=3.2e-07 Score=85.51 Aligned_cols=134 Identities=16% Similarity=0.085 Sum_probs=87.6
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhh
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST 358 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~ 358 (434)
++.+++.....|.++||.|||..+..|.+...+.........+-...++.-+.+. ...+-.++..++.+|+++.+.|+.
T Consensus 78 ~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~G-i~kgnl~v~rAiisdV~sek~r~l 156 (451)
T KOG2615|consen 78 SILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGG-IFKGNLSVIRAIISDVVSEKYRPL 156 (451)
T ss_pred HHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCchHHHHHHHHhhcChhhccc
Confidence 4667888899999999999999999987777765444333222111111011111 123455778899999999999999
Q ss_pred HHhHHHHhhhHhHhhHHHHHHHHhh---hcchhhHHH---HHHHHHHHHHHHHHhcccccC
Q 013910 359 GAGVAYAVGRIGGMVCPLVAVGLVT---SCHQTAAIL---LLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 359 a~gi~~~~~~ig~~~~p~~~~~l~~---~~g~~~~~~---~~~~~~~i~~~~~~~~~~et~ 413 (434)
+++.......+|-+++|.+.+++.. ..+.+..++ +..............+.|||-
T Consensus 157 ~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 157 GMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred eeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999888765 333322222 222222222344455667883
No 185
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.55 E-value=7.1e-06 Score=80.64 Aligned_cols=111 Identities=12% Similarity=0.026 Sum_probs=70.2
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---hhhhhHHHHH-HHHHHHHHHhhhhhhhhhhccccc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTA-LLSGARMFSMGTFIIANIFAPEIY 351 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~El~ 351 (434)
....+...++..+.|.++||+|||+.+..+..+.++..+... ....+..... ..................+..|.+
T Consensus 55 ~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~ 134 (402)
T TIGR00897 55 TLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNT 134 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhC
Confidence 344567788999999999999999999887776665433221 1111222111 111111111111223344567889
Q ss_pred CCCchhhHHhHHHHhhhHhH-hhHHHHHHHHhhhcc
Q 013910 352 PTSMRSTGAGVAYAVGRIGG-MVCPLVAVGLVTSCH 386 (434)
Q Consensus 352 P~~~R~~a~gi~~~~~~ig~-~~~p~~~~~l~~~~g 386 (434)
|++.|+++.|+.++...+|. .++|.+.+.+.+..+
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 135 KQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999988885 577877777666555
No 186
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.54 E-value=3.9e-05 Score=75.94 Aligned_cols=127 Identities=19% Similarity=0.153 Sum_probs=80.0
Q ss_pred chhhhhhh--hhHhhh---c-chHHH-HHHHHHHHHHHHHHhhcc----cHHHHHHHHHHHHhcCCCch-hhhhhhhhcc
Q 013910 15 CPKLLLEP--LYFIFA---F-SRMSI-LGGALVTFVAGLLSAFSP----NYISLLILRGLAGAGLGSGH-VFFSWFMEFV 82 (434)
Q Consensus 15 ~~~~~~~~--~~~~~~---G-Rr~~l-~~~~~~~~i~~~~~~~~~----~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~ 82 (434)
.||.++-. ..+|-+ | ||+.+ +++.++...+.+..+..+ +.....+.=++..+|....- +.-..+.|..
T Consensus 36 lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~ 115 (433)
T PF03092_consen 36 LPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELA 115 (433)
T ss_pred CchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence 45555433 477844 2 44444 445555444444444433 45555555566666655443 3345566776
Q ss_pred CC--CcchhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcCC
Q 013910 83 PP--SNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMPE 141 (434)
Q Consensus 83 p~--~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lpE 141 (434)
.+ +.||...+.......+|.+++..+++.+.+..++|+.|.+.++...+..+. .+..+|
T Consensus 116 ~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 116 RREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 33 337888888888999999999999888888889999999887666655444 444555
No 187
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.51 E-value=4.6e-06 Score=81.68 Aligned_cols=124 Identities=12% Similarity=-0.013 Sum_probs=80.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...++..++.+..+.++||+|||+++..+..+.++......+..+.......-....+......+....+..|.+| +.|
T Consensus 52 ~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~ 130 (393)
T PRK09705 52 LPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRT 130 (393)
T ss_pred HHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccc
Confidence 3345667788999999999999999999988888776665544332222111111111222223344556788887 679
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhc-chhhHHHHHHHHHHHH
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSC-HQTAAILLLEALIVLS 401 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~-g~~~~~~~~~~~~~i~ 401 (434)
+.++|+.......|+.+++.+.+.+.+.. +....+.+++...++.
T Consensus 131 ~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 131 PLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999888888888888887776643 3334444444444433
No 188
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.50 E-value=2.4e-06 Score=83.66 Aligned_cols=122 Identities=18% Similarity=0.243 Sum_probs=87.7
Q ss_pred hhHhhhcc-hHHHHHHHHHHHHHHHHH-h--h-cc-cHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHH
Q 013910 23 LYFIFAFS-RMSILGGALVTFVAGLLS-A--F-SP-NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFST 96 (434)
Q Consensus 23 ~~~~~~GR-r~~l~~~~~~~~i~~~~~-~--~-~~-~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~ 96 (434)
++..|.|+ |+-++.+.++.+++.++= + . .+ .-..++++|++.|+|.|...+.-.|++.....+.|-++.+....
T Consensus 93 ~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 93 IWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred ccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhh
Confidence 46778875 677888888888888664 2 2 23 56789999999999999887888899999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHhc--ccc-----------hHHHHHHHHHHHHHHHHH-HHhcCCChh
Q 013910 97 FWTFGSVSEAALAWIVMP--ILT-----------WRWLLALSAIPAFVLLIF-IVFMPESPR 144 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~--~~~-----------Wr~~f~~~~i~~~l~~~~-~~~lpESp~ 144 (434)
+..+|..+||.++..+.+ ..| +-.+-++..+..++.++. .+++.|.++
T Consensus 173 ~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 173 GFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 888898888887766532 112 233445555555554433 445666654
No 189
>PRK09952 shikimate transporter; Provisional
Probab=98.50 E-value=1.2e-05 Score=79.92 Aligned_cols=135 Identities=16% Similarity=0.039 Sum_probs=80.6
Q ss_pred HHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhH----H----HHHHHHHHHHHHhhhhhhhhhhccc
Q 013910 278 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----L----LTALLSGARMFSMGTFIIANIFAPE 349 (434)
Q Consensus 278 ~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~E 349 (434)
..+...+|.++.|+++||+|||+.+..+..+.++..+...+..+.. + ....-+...+...+.++....+.+|
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 3355678889999999999999999988877776655544322211 1 1111111112222334556778899
Q ss_pred ccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh--------hcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 350 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT--------SCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 350 l~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~--------~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
.+|++.|+...+.......+|..+++.+...+.. ..+....+++.++..++ .+......||++
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~ 223 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESA 223 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCCh
Confidence 9999999998888877777777776655443321 22334455544443333 233333446653
No 190
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.49 E-value=9.3e-07 Score=82.98 Aligned_cols=137 Identities=19% Similarity=0.158 Sum_probs=103.7
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHhhhhhhhhhhcccccCCCc-h
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI-LLTALLSGARMFSMGTFIIANIFAPEIYPTSM-R 356 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~-R 356 (434)
.+.+++...+.|.+.||+|+|..+++++++.....+.+.+.++.. ..++-. ...............+.++.||.+. |
T Consensus 116 A~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~-LQgvgsA~~~tsglamlAd~f~~d~er 194 (464)
T KOG3764|consen 116 ALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARS-LQGVGSAFADTSGLAMLADVFPEDNER 194 (464)
T ss_pred HHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHH-HhhhhHHHHHhhhHHHHHHHcccchhh
Confidence 466777788899999999999999999888877666655533221 111111 1111112223445678889999966 7
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcc
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKE 416 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~ 416 (434)
++++|+.-.+..+|-.++|.+.+.+++..|...+|++.++++++.....++..+.++.++
T Consensus 195 ~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 195 GSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred hHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 999999999999999999999998999889999999999999999999988886666554
No 191
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.46 E-value=1.1e-05 Score=90.05 Aligned_cols=108 Identities=18% Similarity=0.010 Sum_probs=72.9
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVT---LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
+..+..+++.+++|.++||+|||++++.+.++..+..+.... ..+.+...+..+...++.....+....+.+|++|.
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 134 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK 134 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc
Confidence 344566788889999999999999998776554433222211 11112111111111122223345667889999999
Q ss_pred CchhhHHhHHHHhhhHhHhhHHHHHHHHhhh
Q 013910 354 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS 384 (434)
Q Consensus 354 ~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~ 384 (434)
+.|+.++|+......+|.+++|.+.+.+.+.
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988877654
No 192
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.45 E-value=1.6e-05 Score=88.87 Aligned_cols=136 Identities=15% Similarity=-0.092 Sum_probs=82.0
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHH--HHHHHHHHHhh-hhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIF--VCIFLLPLVTL-QSNILLTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
+..+..++...++|.++||+|||+++...... ....+..+... .+.+...+..+....+.....+....+..|++|.
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~ 139 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNK 139 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc
Confidence 33455667788899999999999976332111 11111111111 2222222222222222333456778899999999
Q ss_pred CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 354 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 354 ~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+.|+.++|+..+...+|.+++|.+.+.+.+..+....+ +..+...+.+++..+..|+++
T Consensus 140 ~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 140 DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999999887765544344 333333333333334445553
No 193
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.44 E-value=1.9e-05 Score=77.76 Aligned_cols=109 Identities=13% Similarity=-0.007 Sum_probs=72.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--hhhHH-HHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--QSNIL-LTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
......++..++.+..+++.||+|||+.+..+..+.++........ .++.. .....+..........+....+..|+
T Consensus 43 l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~ 122 (410)
T TIGR00885 43 VQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVM 122 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHH
Confidence 3345556778888999999999999999998877766654433211 11111 11111111111112233445567788
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
.|++.|++..++.+.+..+|+.++|.+.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 123 GPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999998887664
No 194
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.39 E-value=3.1e-05 Score=78.21 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHhh-----chhHHHH-HHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 284 PGLLTAALLVDRV-----GRKLSMT-IMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 284 ~g~~~~~~l~dr~-----gRR~~~~-~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
.+.++.+.++||+ |||+..+ .+.+...+....+.+.. .+ +..........++..........+.+|.+|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5778899999999 9998644 44444444433333321 11 12211112222222333455678899999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHHHHhh-hcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~~l~~-~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
.|+++.++.....++|.++++.+...+.+ ..|....+++.++..++..+..++ .||+.
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999999999999988887776 346666777777777766555555 46654
No 195
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.37 E-value=4e-05 Score=76.23 Aligned_cols=139 Identities=10% Similarity=-0.024 Sum_probs=84.0
Q ss_pred HHHHHhhhhhHHHHHHHHHH----hhchhHHHHHHHHHHH-HHHHHHHhhhh-------------hHHHHHHHH----HH
Q 013910 275 VFITSFAELPGLLTAALLVD----RVGRKLSMTIMFIFVC-IFLLPLVTLQS-------------NILLTALLS----GA 332 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~d----r~gRR~~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~----~~ 332 (434)
..+..+..++...+.|.++| |+|||+.++....+.. +.+..+.+..+ ......... ..
T Consensus 45 ~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 45 WLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 34555677788888999999 5999998876533333 33333322111 011101111 11
Q ss_pred HHHHhhhhhhhhhhcccccCCCch--hhHHhHHHHhhhHhHhhHHHHHHHHh--hhc-------------chhhHHHHHH
Q 013910 333 RMFSMGTFIIANIFAPEIYPTSMR--STGAGVAYAVGRIGGMVCPLVAVGLV--TSC-------------HQTAAILLLE 395 (434)
Q Consensus 333 ~~~~~~~~~~~~~~~~El~P~~~R--~~a~gi~~~~~~ig~~~~p~~~~~l~--~~~-------------g~~~~~~~~~ 395 (434)
-+..........++.+|+.|++.| ..+.++.+.+..+|+++++.+.+... +.. +....+++-+
T Consensus 125 d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a 204 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDI 204 (477)
T ss_pred HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHH
Confidence 112222344567789999999876 57888888888898888887655321 110 1234456666
Q ss_pred HHHHHHHHHHHhcccccC
Q 013910 396 ALIVLSVVVILLIPFETK 413 (434)
Q Consensus 396 ~~~~i~~~~~~~~~~et~ 413 (434)
++.+++.++..+..+|..
T Consensus 205 ~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 205 ILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHeeeeeccC
Confidence 777788888888877864
No 196
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.36 E-value=8.8e-06 Score=80.19 Aligned_cols=125 Identities=18% Similarity=0.135 Sum_probs=86.4
Q ss_pred hhhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc---ccHH------HHHHHHHHHHh--cCCCchhhhhhhhhccCCCc
Q 013910 18 LLLEPLYFIFAFSRMSILGGALVTFVAGLLSAFS---PNYI------SLLILRGLAGA--GLGSGHVFFSWFMEFVPPSN 86 (434)
Q Consensus 18 ~~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~---~~~~------~l~~~R~l~Gi--g~g~~~~~~~~~~E~~p~~~ 86 (434)
.+..|+..||+|||+.++.+..+..+..++.... .+.. ..+++.++-.+ +.|.+++.+-+.+|.+|++.
T Consensus 322 t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~ 401 (485)
T KOG0569|consen 322 TLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA 401 (485)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc
Confidence 3567789999999999999999988877665433 2222 12445554444 45555666666789999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHhcCCCh
Q 013910 87 RGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLL-IFIVFMPESP 143 (434)
Q Consensus 87 Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~-~~~~~lpESp 143 (434)
|..+.++.....-+...+....-..+-+..|= +.|++..+|+.+.. ..++++||+.
T Consensus 402 R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 402 RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 99999888777777776655444444333333 67777777777764 4567799984
No 197
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.36 E-value=6.8e-07 Score=85.55 Aligned_cols=143 Identities=13% Similarity=0.020 Sum_probs=99.3
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
...+...++..++|++.||.+|++++.+|..+-.+..+...+...-|...++-......-....++...+.+|.||...|
T Consensus 76 vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~R 155 (493)
T KOG1330|consen 76 VFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKR 155 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhh
Confidence 33455667888999999999999999998888777666555443223322222221112223456778889999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCH-QTAAILLLEALIVLSVVVILLIPFETKGKELVN 419 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g-~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~e 419 (434)
++++++.+.....|+.++-.....+...++ ..+++..-+++.++.+++..++.+|...+.-+|
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 999999999998888776554443333333 346677788888888888888887876544443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.35 E-value=1.6e-05 Score=76.61 Aligned_cols=128 Identities=23% Similarity=0.215 Sum_probs=81.0
Q ss_pred HHHHHHHHHhh-----chhHHHH-HHHHHHHHHHHHHHhhh--hh-HHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 286 LLTAALLVDRV-----GRKLSMT-IMFIFVCIFLLPLVTLQ--SN-ILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 286 ~~~~~~l~dr~-----gRR~~~~-~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
..+.|.++||+ |||+.++ .+.+..++....+.+.. .. +...........+..........+.+|.+|++.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67889999997 8888754 44444444433333321 11 1111111111122222235567788999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcc--------hhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCH--------QTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g--------~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+.+.|+......+|.++++.+.+.+....+ ....+++.+++.++..+...+..||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999998888999999988877766555 445566666666666655555556653
No 199
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.35 E-value=1e-05 Score=78.67 Aligned_cols=101 Identities=24% Similarity=0.232 Sum_probs=66.3
Q ss_pred hhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHH----HHhhhhhhhhhhcccccC
Q 013910 281 AELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI----LLTALLSGARM----FSMGTFIIANIFAPEIYP 352 (434)
Q Consensus 281 ~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~El~P 352 (434)
...++.++.|+++||+|||+.+..+.++..+.........+.. +.........+ ......+....+.+|.+|
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 126 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP 126 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC
Confidence 3356788999999999999999888777665544433322111 10011111111 111223455678899999
Q ss_pred CCchhhHHhHHHHhhhHhHhhHHHHHHHH
Q 013910 353 TSMRSTGAGVAYAVGRIGGMVCPLVAVGL 381 (434)
Q Consensus 353 ~~~R~~a~gi~~~~~~ig~~~~p~~~~~l 381 (434)
.+.|+...++......+|.++++.+...+
T Consensus 127 ~~~r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 127 PGKRGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888766543
No 200
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.32 E-value=0.00048 Score=67.51 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=69.6
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
|..|-..|+.|.|+.+.++...+...-...-+ +|-.-+++.-.+.|+|.+.-.+. ..|++|.++++.+.+..++.=..
T Consensus 68 l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai 146 (461)
T KOG3098|consen 68 LFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAI 146 (461)
T ss_pred HhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHH
Confidence 88899999999999999999988876654434 45666888899999997764443 35789999999999888876555
Q ss_pred HHHHHHHHHHHHH
Q 013910 98 WTFGSVSEAALAW 110 (434)
Q Consensus 98 ~~~G~~l~~~l~~ 110 (434)
...+.+.|+.+-.
T Consensus 147 ~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 147 GQSSLIIGGIILF 159 (461)
T ss_pred HHHHHHhhhHhhe
Confidence 5556666655433
No 201
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.31 E-value=2.9e-05 Score=74.85 Aligned_cols=108 Identities=13% Similarity=0.016 Sum_probs=67.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
....+...++.+..++++||+|||+.+..+.+..++..... ...+........+...+...........+..|.+| +.
T Consensus 42 s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~ 119 (355)
T TIGR00896 42 ALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR 119 (355)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch
Confidence 34456677888999999999999999888766554433332 22221211111111111111112234456678887 57
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSC 385 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~ 385 (434)
|+++.|+.+....+|..+++.+.+.+.+..
T Consensus 120 ~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 120 VGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999988899988888877766543
No 202
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.30 E-value=5.6e-06 Score=80.78 Aligned_cols=112 Identities=15% Similarity=0.054 Sum_probs=93.0
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHH-H
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-T 96 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~ 96 (434)
++.+++.||+|+|+.+.++.+...+..++.++++|...+++.++++|++.|... ....|+.+. |+++|+...++++ .
T Consensus 258 ~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~ 336 (382)
T TIGR00902 258 AFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNAL 336 (382)
T ss_pred HHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHH
Confidence 455678999999999999999999999889999999999999999999998865 445678877 9999999999986 5
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 013910 97 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVL 132 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~ 132 (434)
...+|.++++.+++.+.+..++ ..|...++.+++.
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 7889999999999998888887 4455555554443
No 203
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.29 E-value=0.0021 Score=61.47 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=67.9
Q ss_pred hhHhhhc-----chHHHHHHHHHHHHH-HHHHhh-----cc--------cH---HHHHHHHHHHHhcCCCchh-hhhhhh
Q 013910 23 LYFIFAF-----SRMSILGGALVTFVA-GLLSAF-----SP--------NY---ISLLILRGLAGAGLGSGHV-FFSWFM 79 (434)
Q Consensus 23 ~~~~~~G-----Rr~~l~~~~~~~~i~-~~~~~~-----~~--------~~---~~l~~~R~l~Gig~g~~~~-~~~~~~ 79 (434)
..+|+++ ||..+++.-...... ..+..+ +. .+ ....+.=.+.|+|.+...+ ..+..+
T Consensus 36 ~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~ 115 (403)
T PF03209_consen 36 HRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLA 115 (403)
T ss_pred cccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHH
Confidence 4899999 887776655444332 222222 11 11 1234444566777766543 445778
Q ss_pred hccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHH
Q 013910 80 EFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI-LTWRWLLALSAIP 128 (434)
Q Consensus 80 E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~-~~Wr~~f~~~~i~ 128 (434)
|.+|+|+|++..++.-....+|.++++.+...+.+. ..=|..-.+..+.
T Consensus 116 D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 116 DLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred hcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 999999999999999888999999999887766543 3444444444433
No 204
>PRK10133 L-fucose transporter; Provisional
Probab=98.25 E-value=0.00018 Score=71.60 Aligned_cols=110 Identities=13% Similarity=0.045 Sum_probs=69.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHHhhhhhhhhhhccc
Q 013910 273 INVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPE 349 (434)
Q Consensus 273 ~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 349 (434)
.......++..++.+..+.++||+|||+.+..+..+..+..+... ...+........+...+...........+..|
T Consensus 65 l~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~ 144 (438)
T PRK10133 65 LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTV 144 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 344455677788999999999999999999988777666544321 11111111111111111112223444555668
Q ss_pred ccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 350 IYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 350 l~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
..|.+.|....++.+.+..+|..++|.+...+.
T Consensus 145 ~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 145 LGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777777889999888899988887765443
No 205
>PTZ00207 hypothetical protein; Provisional
Probab=98.24 E-value=0.00013 Score=74.40 Aligned_cols=122 Identities=11% Similarity=0.150 Sum_probs=70.8
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh-----hhHHHHHH-HHHHHHHHhhhhhhhhhhcccccCCCchhh
Q 013910 285 GLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ-----SNILLTAL-LSGARMFSMGTFIIANIFAPEIYPTSMRST 358 (434)
Q Consensus 285 g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~El~P~~~R~~ 358 (434)
..+.+|++.||+|||+++.++.++..+..+...... .+.+...+ ...........+........+.|| +.|++
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 445689999999999999988877776554433321 11221111 111111111123344555678887 67999
Q ss_pred HHhHHHHhhhHhHhh-HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 359 GAGVAYAVGRIGGMV-CPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 359 a~gi~~~~~~ig~~~-~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
+.|+......+|+.+ +++....+.+ +....+++.++..++..+..+.+.
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999999875 4444443332 233445555655555444444433
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.20 E-value=0.00015 Score=70.76 Aligned_cols=115 Identities=20% Similarity=0.164 Sum_probs=93.5
Q ss_pred hhhHhh-hcchHHHHHHHHHHHHHHHHHhhc--ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCc--chhHHHHHH
Q 013910 22 PLYFIF-AFSRMSILGGALVTFVAGLLSAFS--PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN--RGKWMVVFS 95 (434)
Q Consensus 22 ~~~~~~-~GRr~~l~~~~~~~~i~~~~~~~~--~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~--Rg~~~~~~~ 95 (434)
.+..|| +|+|++++++.++..++-++.+.. .+...++++-.+.++|.|... ...+.+.|..|++. |=...+++.
T Consensus 82 G~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY 161 (498)
T COG3104 82 GWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFY 161 (498)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEE
Confidence 367886 699999999999999999888887 478899999999999999864 44567788888854 444466778
Q ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q 013910 96 TFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI 136 (434)
Q Consensus 96 ~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~ 136 (434)
.+.++|.++++.+...+....+|...|...++-...-++..
T Consensus 162 ~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 162 MGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred EEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999889999999999877555444433
No 207
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.17 E-value=3.6e-05 Score=78.20 Aligned_cols=136 Identities=20% Similarity=0.176 Sum_probs=85.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNI-LLTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
.....+++..|.+++|.++|++|||..+.++.+...+..+......+.. ....-.+.+ +...+...+..++.+|+.|+
T Consensus 95 ~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G-~g~G~~~~~~piy~sEiap~ 173 (513)
T KOG0254|consen 95 TSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTG-LGVGGASVLAPVYISEIAPA 173 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhc-cchhhhhhcchhhHhhcCCh
Confidence 3455677889999999999999999999888777666555444333221 111111111 12223335678899999999
Q ss_pred CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhc--chhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 354 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC--HQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 354 ~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~--g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+.|+.-.+.......+|..++ ++.++..... +....+.+..+.+++..+. .++.||+.
T Consensus 174 ~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 174 HIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred hhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 999999888887777655555 4455444322 2233444455555565555 56666753
No 208
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=4e-06 Score=77.94 Aligned_cols=120 Identities=15% Similarity=0.147 Sum_probs=86.9
Q ss_pred hhhhhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc--ccH--HHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHH
Q 013910 16 PKLLLEPLYFIFAFSRMSILGGALVTFVAGLLSAFS--PNY--ISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWM 91 (434)
Q Consensus 16 ~~~~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~--~~~--~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~ 91 (434)
|-+++.-+..||+|||+++.+..+++.++.++.-+. +|. ..++.+|++.-.+.+ +.|.|.-|++|.+.|+...
T Consensus 396 PGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fq---vaYvYtPEVyPTavRatgv 472 (528)
T KOG0253|consen 396 PGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQ---VAYVYTPEVYPTAVRATGV 472 (528)
T ss_pred CchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchhe---EEEEecCcccchhhhhcch
Confidence 445667789999999999999999999988776544 332 457788887765544 4455667999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcC
Q 013910 92 VVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMP 140 (434)
Q Consensus 92 ~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lp 140 (434)
|.-....-+|.++.|.++ +....+=-.+..+.+...++..+...++|
T Consensus 473 GtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 473 GTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred hhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeee
Confidence 999999999999999998 33222322333444444444555566666
No 209
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.16 E-value=0.00024 Score=69.78 Aligned_cols=130 Identities=18% Similarity=0.170 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHhh-----chhH-HHHHHHHHHHHHHHHHHhhh--hhHH-HHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 283 LPGLLTAALLVDRV-----GRKL-SMTIMFIFVCIFLLPLVTLQ--SNIL-LTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 283 ~~g~~~~~~l~dr~-----gRR~-~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
.+...+.+.++||+ |||+ .+..+.....+.+..+.... .+.+ .....+....+.....+....+.+|.+|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 45678899999999 7876 45555555554444333321 1122 11111111122223345678889999999
Q ss_pred CchhhHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 354 SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 354 ~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
+.|+++.++......+|.++++.+...+.+. .+....+++.++..++..+... ..||++
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~-~~~e~~ 185 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTL-WAPEPE 185 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCCCc
Confidence 9999999999988888888888887777664 3555666666666666555443 445654
No 210
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.15 E-value=1.1e-05 Score=78.93 Aligned_cols=116 Identities=11% Similarity=0.065 Sum_probs=92.9
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHH-HHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVV-FST 96 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~-~~~ 96 (434)
+..|.+.||+|||+.+.++..+..+...+...++|...+++.++++|++..... ....+..|..|++.|+...+. ++.
T Consensus 272 ~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~ 351 (396)
T TIGR00882 272 FCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQF 351 (396)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHH
Confidence 444679999999999999988888877777788899889999999998864432 233456677888888887665 678
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q 013910 97 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLI 134 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~ 134 (434)
...+|..+++.+++.+.+..||+..|.+.++..++..+
T Consensus 352 ~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 352 AKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 89999999999998888888999999998877666544
No 211
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.14 E-value=7e-05 Score=73.30 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=84.4
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhH
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 359 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a 359 (434)
....+..+.+|+++||+|-|+.+..+.+..+++.+...+..+.....+.-+.. ....++....+.+....+|++.|+++
T Consensus 73 ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll-GvaEA~~~A~~syI~~WfP~kER~ra 151 (511)
T TIGR00806 73 YSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY-SVTMAARIAYSSYIFSLVPPSRYQRA 151 (511)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 45567788999999999999999988877776655554433222111111111 12234433778888999999999999
Q ss_pred HhHHHHhhhHhHhhHHHHHHHHhhhcchh-hH-HHHHH-HHHHHHHHHHHhcc
Q 013910 360 AGVAYAVGRIGGMVCPLVAVGLVTSCHQT-AA-ILLLE-ALIVLSVVVILLIP 409 (434)
Q Consensus 360 ~gi~~~~~~ig~~~~p~~~~~l~~~~g~~-~~-~~~~~-~~~~i~~~~~~~~~ 409 (434)
.|+.++...+|.++++.+.+.+. ..|.. .. .-.+. +...++.++.+++|
T Consensus 152 tsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 152 AAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999998888743 33422 11 12233 44455556665654
No 212
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.13 E-value=0.00013 Score=73.88 Aligned_cols=123 Identities=16% Similarity=0.143 Sum_probs=72.0
Q ss_pred HHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 278 TSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 278 ~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
..+....+..+.|.++|.+|||..++.+.++..+..+.....++ +.......+.+. ..|...+.....+|+.|.+.|
T Consensus 87 ~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gv--gaG~~~~~~~~isEl~p~k~R 164 (599)
T PF06609_consen 87 WTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGV--GAGVQELAALAISELVPNKWR 164 (599)
T ss_pred HHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHH--hhHHHHHHHHHHHHhcccchh
Confidence 34556667788899999999999999888777766655443222 122111111111 123333456668999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSV 402 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~ 402 (434)
..+.++.....-+....+|.+...+....+..+.+++..+...++.
T Consensus 165 ~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 165 GLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred hhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 9888776654434444556655444333333344554444444443
No 213
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.13 E-value=0.00018 Score=67.62 Aligned_cols=120 Identities=19% Similarity=0.155 Sum_probs=76.0
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhh-hhccCCCcchhHH-HHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWF-MEFVPPSNRGKWM-VVFSTFWT 99 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~-~E~~p~~~Rg~~~-~~~~~~~~ 99 (434)
.+.||+|||+.-+..+++++++++ +-..+|+..|+++|++.|++...-. +.=+|+ .|.-.+..+..+. ..+.....
T Consensus 91 ~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf 169 (354)
T PF05631_consen 91 SLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATF 169 (354)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 589999999999999999999886 5666899999999999999977643 444565 5775444333332 23322222
Q ss_pred HHH----HHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHH-HHhcCCCh
Q 013910 100 FGS----VSEAALAWIVMPILT--WRWLLALSAIPAFVLLIF-IVFMPESP 143 (434)
Q Consensus 100 ~G~----~l~~~l~~~~~~~~~--Wr~~f~~~~i~~~l~~~~-~~~lpESp 143 (434)
+++ +.+..++-.+.+..+ =..+|....+..++..+. ....+|++
T Consensus 170 ~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 170 FGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 332 333334444443333 367888776666555443 34456653
No 214
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.12 E-value=7e-05 Score=72.92 Aligned_cols=134 Identities=22% Similarity=0.254 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHhhhh-hhhhhhcccccCCC--chh
Q 013910 285 GLLTAALLVDRV-GRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTF-IIANIFAPEIYPTS--MRS 357 (434)
Q Consensus 285 g~~~~~~l~dr~-gRR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~El~P~~--~R~ 357 (434)
..+++||++||+ |+|+.++.+.++..+--+.+.... .....+.+.... +..|.+ +-...+.+|++|+. .|-
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~--iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALII--VGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHH--hccccccccHHHHHHHhcCCCCcccC
Confidence 457899999995 999999988877766544443321 111111111111 112222 34566788999872 378
Q ss_pred hHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCcccccc
Q 013910 358 TGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVNT 420 (434)
Q Consensus 358 ~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~e~ 420 (434)
.++++-++..++|++++|++.+++.+..+.+..+-..++-+.++.+..+..++..++....+.
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~ 217 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPD 217 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCC
Confidence 888999999999999999999998887776666777666667776666666555555544433
No 215
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.08 E-value=3e-05 Score=75.57 Aligned_cols=116 Identities=15% Similarity=0.035 Sum_probs=88.1
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHH-H
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFS-T 96 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~-~ 96 (434)
++.+++.||+|+|+.+..+.....++.++.+++++...+++..++.|++.+... ....++.+. +++++++..+.++ .
T Consensus 258 ~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 336 (382)
T PRK11128 258 AFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSAL 336 (382)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHH
Confidence 445578999999999999988888877777888999999999999999877653 344566675 6666788888775 6
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q 013910 97 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI 136 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~ 136 (434)
....|..+++.+++.+.+..++. .++..++..++.+..+
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPALFIR 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHH
Confidence 66778888898888888877874 5555555555444433
No 216
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.04 E-value=6.4e-05 Score=74.60 Aligned_cols=99 Identities=20% Similarity=0.220 Sum_probs=74.9
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc-ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccC-------CCcchhH
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAFS-PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVP-------PSNRGKW 90 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~-~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p-------~~~Rg~~ 90 (434)
+.+++.||+|||+.+..+..+..++.++..+. ++...+.+..++.|++.+... ...++++|..+ ++++|..
T Consensus 276 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 355 (437)
T TIGR00792 276 LFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLV 355 (437)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHH
Confidence 34578999999999999988887776666554 456677888888898887653 44556667654 5668999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccch
Q 013910 91 MVVFSTFWTFGSVSEAALAWIVMPILTW 118 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~~~~~~W 118 (434)
.++++....+|..+++.+...+.+..||
T Consensus 356 ~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 356 YSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999887776543333
No 217
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.02 E-value=0.0037 Score=60.33 Aligned_cols=119 Identities=22% Similarity=0.177 Sum_probs=72.2
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFW 98 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~ 98 (434)
+..|++.||.-=+.-.....+++.++-++.++++|...=+++=.+.+++.|.+.+...=++...|+. ..+.+..+.
T Consensus 77 l~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~~y~~~----~l~~wssGT 152 (402)
T PF02487_consen 77 LIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTHFYGKS----SLSAWSSGT 152 (402)
T ss_pred HHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHHhcCcc----ccccccCCc
Confidence 4578888876433334555556777778889999998888888888888877654432233455542 345556666
Q ss_pred HHHHHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHH-HhcCCC
Q 013910 99 TFGSVSEAALAWIVMPILT--WRWLLALSAIPAFVLLIFI-VFMPES 142 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~--Wr~~f~~~~i~~~l~~~~~-~~lpES 142 (434)
..+.++|+..-..+.. .+ -|..+.+....+++..+.+ +.+|.+
T Consensus 153 G~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 153 GGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred ChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 6666666654333333 34 3666666655555444443 445543
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.95 E-value=7.6e-05 Score=69.16 Aligned_cols=113 Identities=27% Similarity=0.310 Sum_probs=85.3
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhccc--HHHHHHHHHHHHhcCCCc-hhhhhhhhhccCC-CcchhHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPN--YISLLILRGLAGAGLGSG-HVFFSWFMEFVPP-SNRGKWMVVF 94 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~--~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~-~~Rg~~~~~~ 94 (434)
.+.+.+.||+|||+.+..+......+.++.++..+ ...+++.|++.|++.|.. .....++.|+.|+ ++|+...+..
T Consensus 57 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (338)
T COG0477 57 LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLV 136 (338)
T ss_pred hhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 45567999999998888888765666677777766 999999999999988864 3556778899988 7889888888
Q ss_pred HH-HHHHHHHHHHHHHHHHhc--ccchHHHHHHHHHHHHH
Q 013910 95 ST-FWTFGSVSEAALAWIVMP--ILTWRWLLALSAIPAFV 131 (434)
Q Consensus 95 ~~-~~~~G~~l~~~l~~~~~~--~~~Wr~~f~~~~i~~~l 131 (434)
.. ...+|.++++.++..+.. ..+||+.|.........
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 137 TLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 77 577888888766554432 36899966666555443
No 219
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.94 E-value=1.8e-06 Score=87.41 Aligned_cols=88 Identities=16% Similarity=0.236 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhcc------------------
Q 013910 55 ISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPI------------------ 115 (434)
Q Consensus 55 ~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~~------------------ 115 (434)
..++++.++.|+|....+ ...+|+=|.+++++-+...|+......+|..+|.+++......
T Consensus 142 ~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~d 221 (539)
T PF03137_consen 142 YVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSD 221 (539)
T ss_dssp ----------SSS-------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCC
Confidence 469999999999988765 5678999999999999999999999999999888887654210
Q ss_pred c----chHHHHHHHHHHHHHHHHHHHhcCCC
Q 013910 116 L----TWRWLLALSAIPAFVLLIFIVFMPES 142 (434)
Q Consensus 116 ~----~Wr~~f~~~~i~~~l~~~~~~~lpES 142 (434)
. .|-.-|.+.++..++..+..+.+|.+
T Consensus 222 p~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 222 PRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp -------------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 1 25556666666666665556666643
No 220
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.88 E-value=0.0002 Score=74.41 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=70.1
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh----------------------------h---------
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ----------------------------S--------- 321 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~----------------------------~--------- 321 (434)
.++..++.++.+++.||.+||+.+.++.++.++..+.....+ .
T Consensus 78 ~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 157 (633)
T TIGR00805 78 EIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQ 157 (633)
T ss_pred hHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccc
Confidence 355567778899999999999988777666665443332111 0
Q ss_pred --------h--HHHHHHHHHHHHH----HhhhhhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 322 --------N--ILLTALLSGARMF----SMGTFIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 322 --------~--~~~~~~~~~~~~~----~~~~~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
. .....+++.+.+. ....++....+..|.+|++.|+...|+.+....+|..+++.+.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 158 CPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred cccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 0 0011112222221 112345667889999999999999999999999999999888776654
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.00021 Score=71.00 Aligned_cols=130 Identities=15% Similarity=0.106 Sum_probs=94.1
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchh
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL--VTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRS 357 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~ 357 (434)
.+.+++.+.++++.||+|-|+++..+.+++++..+.. ......+...+.-+...+.....++....+.+.-.|+..|+
T Consensus 84 ~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers 163 (466)
T KOG2532|consen 84 WGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERS 163 (466)
T ss_pred HHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHH
Confidence 5667888889999999999999998888877654433 22222122122222222233345778888999999999999
Q ss_pred hHHhHHHHhhhHhHhhHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHhcc
Q 013910 358 TGAGVAYAVGRIGGMVCPLVAVGLVTS-CHQTAAILLLEALIVLSVVVILLIP 409 (434)
Q Consensus 358 ~a~gi~~~~~~ig~~~~p~~~~~l~~~-~g~~~~~~~~~~~~~i~~~~~~~~~ 409 (434)
+..++..+...+|.+++-.+.+.+-+. .|....+++++++.++-.++.+++.
T Consensus 164 ~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 164 TFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999887788888877 7777788888877766655554443
No 222
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.82 E-value=0.00021 Score=70.75 Aligned_cols=137 Identities=20% Similarity=0.143 Sum_probs=97.7
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhH
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTG 359 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a 359 (434)
+..++-+.+-|.++||.|||..+....+.+.+-.+.+.+.. ++... ...........++....+.++.-..+.|..+
T Consensus 73 ~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~~ 149 (463)
T KOG2816|consen 73 LLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERSSS 149 (463)
T ss_pred HHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHHHH
Confidence 34455566778999999999998877665554333332211 23222 1111111223455677889999999999999
Q ss_pred HhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCccccc
Q 013910 360 AGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGKELVN 419 (434)
Q Consensus 360 ~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~~~~e 419 (434)
.|+.+..-..+..++|...+.+....+....+.+-++..+++.+...+..||+...+..+
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 999999888888899998888777766667777888888899999999999987665543
No 223
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.80 E-value=0.0002 Score=69.93 Aligned_cols=115 Identities=11% Similarity=0.046 Sum_probs=80.8
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHh------hcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCC-CcchhH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSA------FSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPP-SNRGKW 90 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~------~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~-~~Rg~~ 90 (434)
++.+++.||+|+|+.+..+........+... ..++...+...-.+.+++.|... ....+..+..++ ++||+.
T Consensus 262 ~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 341 (390)
T TIGR02718 262 GGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTD 341 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHH
Confidence 4556899999999998877765533222211 12344444555555555555543 334455566666 889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 013910 91 MVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLL 133 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~ 133 (434)
.++.+....+|..+++.+++.+.+..||+..|...++..++..
T Consensus 342 ~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 342 VTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888899999998877665543
No 224
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.80 E-value=0.00029 Score=70.39 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=97.9
Q ss_pred hhhhhhHhhhcch--HHHHHHHHHHHHHHHHHhh--------cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcc
Q 013910 19 LLEPLYFIFAFSR--MSILGGALVTFVAGLLSAF--------SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNR 87 (434)
Q Consensus 19 ~~~~~~~~~~GRr--~~l~~~~~~~~i~~~~~~~--------~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~R 87 (434)
++-++..||+|-| ++++..+.++.+..+...+ ..+-..+++.=++.|+..|+.. ..-++++|..|+++.
T Consensus 335 ~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e 414 (477)
T PF11700_consen 335 LLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE 414 (477)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh
Confidence 5556899999999 8999998888766655554 5677889999999999999875 456789999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHHhcCC
Q 013910 88 GKWMVVFSTFWTFGSVSEAALAWIVMPIL-TWRWLLALSAIPAFVLLIFIVFMPE 141 (434)
Q Consensus 88 g~~~~~~~~~~~~G~~l~~~l~~~~~~~~-~Wr~~f~~~~i~~~l~~~~~~~lpE 141 (434)
+...+++....-....+||.+...+.+.. +-|+.+....+..++-+++.+++++
T Consensus 415 ~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 415 AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999877765544 4788777766665555555555554
No 225
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.74 E-value=0.00014 Score=70.35 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=98.4
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchh-hhhhhhhccCCCcchhHHHH-HHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVV-FST 96 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~-~~~ 96 (434)
+..|++.+|+|-|+.++++..+..+=.+++++++|...+.+.+.+.|+..+...+ ..-|+++..|++...+...+ ++.
T Consensus 277 ~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~ 356 (412)
T PF01306_consen 277 FFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQF 356 (412)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTT
T ss_pred HHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHH
Confidence 5678999999999999999999999899999999999999999999999887754 45699999999998887776 478
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HHhcC
Q 013910 97 FWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIF-IVFMP 140 (434)
Q Consensus 97 ~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~-~~~lp 140 (434)
+..+|..+.+.+++.+-++.|.|-.|++.+...+...++ .+.++
T Consensus 357 ~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 357 AKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 889999998988888888889998888777665555443 44453
No 226
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.71 E-value=3.5e-05 Score=73.93 Aligned_cols=120 Identities=14% Similarity=0.059 Sum_probs=93.3
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhccc-H---H----HHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPN-Y---I----SLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVF 94 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~-~---~----~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~ 94 (434)
.++|++|||++.+.+.+++.+..+..++..| . . .+-+.-++.-+|. +.....+-+|.+|++.||..-++.
T Consensus 370 ~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP--n~ttfivpaE~FParvR~t~hGIs 447 (538)
T KOG0252|consen 370 YFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP--NATTFIVPAEIFPARVRSTCHGIS 447 (538)
T ss_pred EEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC--CceeEEeehhhchHHHhhhhhhHH
Confidence 5899999999999999999999999888877 2 1 2223333333443 333334458999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHHHHHHHHHHHHhcCCChh
Q 013910 95 STFWTFGSVSEAALAWIVMP-----ILTWRWLLALSAIPAFVLLIFIVFMPESPR 144 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~-----~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~ 144 (434)
.+..-+|++++...-..+.. ..+-|+.|++.+...++-.+..+++|||.+
T Consensus 448 AA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 448 AASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 99999999988876555555 668999999999988888888888999864
No 227
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00069 Score=68.21 Aligned_cols=128 Identities=17% Similarity=0.144 Sum_probs=90.2
Q ss_pred hhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhh-hhhhhhhhcccccCCCchhhHH
Q 013910 282 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMG-TFIIANIFAPEIYPTSMRSTGA 360 (434)
Q Consensus 282 ~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~El~P~~~R~~a~ 360 (434)
......+.+.+.||+|.|...+.+.+++.+.++...+..+-+...........+..+ .+...-++.+..| .+.|+.|.
T Consensus 94 ~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~ 172 (509)
T KOG2504|consen 94 YLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALAT 172 (509)
T ss_pred HHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHH
Confidence 345566777899999999999999888887766655544332222211111111111 1223334445555 56699999
Q ss_pred hHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhccc
Q 013910 361 GVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPF 410 (434)
Q Consensus 361 gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 410 (434)
|++.+-+.+|.++-|.+..++.+..|...+.++++.+++-..+....+.|
T Consensus 173 Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 173 GIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998988999888888888888888888888888877
No 228
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.65 E-value=1.8e-06 Score=86.05 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=69.6
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ---SNILLTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
......++.++|.+++|+++||+|||+.+..+..+..+..+...+.. +.......-+...+...+.......+..|.
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~ 130 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEI 130 (451)
T ss_pred HHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33455678889999999999999999998887766665544433322 222211111111122223456778899999
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHH
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVA 378 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~ 378 (434)
.|++.|+...++......+|.+++..+.
T Consensus 131 ~~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 131 APPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred cccccccccccccccccccccccccccc
Confidence 9999999988888777767666655543
No 229
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.61 E-value=0.00063 Score=66.54 Aligned_cols=123 Identities=17% Similarity=0.246 Sum_probs=89.6
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc-ccHHHH----HHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFS-PNYISL----LILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMV 92 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~-~~~~~l----~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~ 92 (434)
+..+++..|+|-|+.+.++.+.+.+=..+.+.. ++.... .....++|+..|... +...|+.|.+|++.|++..+
T Consensus 261 ~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~ 340 (400)
T PF03825_consen 261 FFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQG 340 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHH
Confidence 456678889999999999999988877777666 454433 334567999988875 45678899999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhccc------chHHHHHHHHHHHHHHHH-HHHhcCC
Q 013910 93 VFST-FWTFGSVSEAALAWIVMPIL------TWRWLLALSAIPAFVLLI-FIVFMPE 141 (434)
Q Consensus 93 ~~~~-~~~~G~~l~~~l~~~~~~~~------~Wr~~f~~~~i~~~l~~~-~~~~lpE 141 (434)
++.. ...+|..+++.+++.+.+.. .|...+.+.++..++..+ +..+.+|
T Consensus 341 l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 341 LYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9865 56799999999988876544 355566666655554433 3333444
No 230
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.58 E-value=0.0024 Score=65.76 Aligned_cols=89 Identities=12% Similarity=0.184 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhc----c-----------c--
Q 013910 55 ISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP----I-----------L-- 116 (434)
Q Consensus 55 ~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~----~-----------~-- 116 (434)
..++++.++.|+|..... ...+|+=|.+.+++-....++......+|.++|.+++.+... . .
T Consensus 238 llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW 317 (735)
T KOG3626|consen 238 LLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW 317 (735)
T ss_pred HHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch
Confidence 368899999999987754 557788899999999999999999999999988888777521 1 0
Q ss_pred --chHHHHHHHHHHHHHHHHHHHhcCCCh
Q 013910 117 --TWRWLLALSAIPAFVLLIFIVFMPESP 143 (434)
Q Consensus 117 --~Wr~~f~~~~i~~~l~~~~~~~lpESp 143 (434)
-|..=|++.+...++..+..+++|...
T Consensus 318 IGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 318 IGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 277777777777777777777777543
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.56 E-value=0.0011 Score=66.78 Aligned_cols=93 Identities=15% Similarity=0.013 Sum_probs=64.9
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhh-----cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccC-------CCc
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAF-----SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVP-------PSN 86 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~-----~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p-------~~~ 86 (434)
+.|++.||+|||+.+..+..+..++.+...+ ..+...+++.-++.|++.+... ...+++.|..+ +++
T Consensus 285 ~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~ 364 (473)
T PRK10429 285 LFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRC 364 (473)
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccc
Confidence 3467999999999999888776655544322 3456667777778888877653 34556667754 334
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 87 RGKWMVVFSTFWTFGSVSEAALAWIV 112 (434)
Q Consensus 87 Rg~~~~~~~~~~~~G~~l~~~l~~~~ 112 (434)
.|...+......-+|..+++.+.+.+
T Consensus 365 ~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 365 ESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678888888888888887776654
No 232
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.54 E-value=0.0042 Score=62.33 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=70.8
Q ss_pred HHHHHHHHhhc-----hhHHHHHHHHHHH-HHHHHHHhhhh-hHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhh-
Q 013910 287 LTAALLVDRVG-----RKLSMTIMFIFVC-IFLLPLVTLQS-NILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRST- 358 (434)
Q Consensus 287 ~~~~~l~dr~g-----RR~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~- 358 (434)
.+.|.++||++ ||+.++.+.++.+ +....+....+ ......+.+...++....-.....+..|..+ +.++.
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 34889999996 6666666655552 22222221111 1112112222222222233456778889988 44433
Q ss_pred --HHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccC
Q 013910 359 --GAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETK 413 (434)
Q Consensus 359 --a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~ 413 (434)
..+..+....+|..+++.+.+.+.+..+....+++.++..++..+...+ .+|.+
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~-~~E~~ 212 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL-SKERR 212 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh-ccccc
Confidence 3344444455788889988888877666666677777766666444444 46764
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.53 E-value=0.012 Score=56.22 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=71.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLV---TLQSNILLTALLSGARMFSMGTFIIANIFAPEI 350 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 350 (434)
..+....+..++.+..+++.+|+|+|.-++.+..+..+.....+ ...+-......++.........-+....+.+.+
T Consensus 53 iqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~l 132 (422)
T COG0738 53 IQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLL 132 (422)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHh
Confidence 33444456677888899999999999999998887776555432 111111111111111000111123345677888
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
.|++..+.=+.+...++.+|++++|.+..+++.
T Consensus 133 g~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 133 GKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred CCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 888878888999999999999999999888776
No 234
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.48 E-value=0.0041 Score=56.32 Aligned_cols=107 Identities=15% Similarity=0.041 Sum_probs=62.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhh--h----hhHHHHHHHHHHHHHHhhh-hhhhhhh
Q 013910 274 NVFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTL--Q----SNILLTALLSGARMFSMGT-FIIANIF 346 (434)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~-~~~~~~~ 346 (434)
.....+++...| +.+|.+.|+.|.|..+.++.+...+.-..++.. . .+.+..++........... ....-..
T Consensus 42 l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt 120 (250)
T PF06813_consen 42 LSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVT 120 (250)
T ss_pred HHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHH
Confidence 334445555554 778999999999999988877666543333221 1 1222222211111111111 1233344
Q ss_pred cccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 347 APEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 347 ~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
..+-||. .|+++.|+.-+...+++.+-..+...+.
T Consensus 121 ~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 121 CVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 5588985 6999999999998887777666555443
No 235
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.47 E-value=0.0028 Score=63.36 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=99.1
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCch
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMR 356 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R 356 (434)
+..++.++|.+.++.+.||+.-.+.+..+.+..+++.+.-...++.....++-+...++-.+.++..-.+.+.-|..+.|
T Consensus 89 ~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~ 168 (495)
T KOG2533|consen 89 VFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSER 168 (495)
T ss_pred HHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhh
Confidence 34467788999999999999966666555555544443322233333333333333344455678888899999999999
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhh------hcchhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVT------SCHQTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~------~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
++-+|+-++.+.+|+++++++...+.. ..|..+.+++-++++++.+++++++.|+...
T Consensus 169 g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 169 GLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 999999999999999999998887532 2234577888899999888888888877654
No 236
>PRK09848 glucuronide transporter; Provisional
Probab=97.46 E-value=0.0014 Score=65.44 Aligned_cols=92 Identities=18% Similarity=0.137 Sum_probs=69.8
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCC-------cchhH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSP--NYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPS-------NRGKW 90 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~-------~Rg~~ 90 (434)
.+.+.||+|+|+.+..+..+..++.+...+.+ ++..+++.-++.|+|.+... ...+...|..|.+ ++|..
T Consensus 284 ~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~ 363 (448)
T PRK09848 284 VPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLT 363 (448)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHH
Confidence 34689999999999999988887776666644 56677777888898877653 3344556666543 46999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 013910 91 MVVFSTFWTFGSVSEAALAWIV 112 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~ 112 (434)
.++++....+|..+++.+...+
T Consensus 364 ~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 364 YSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988876654
No 237
>PRK09669 putative symporter YagG; Provisional
Probab=97.44 E-value=0.0015 Score=65.13 Aligned_cols=94 Identities=13% Similarity=-0.027 Sum_probs=66.3
Q ss_pred hhhhhHhhhcchHHHHHHHHHHHHHHHHHhh--cccHHHHHHHHHHHHhcCCCch-hhhhhhhhccC-------CCcchh
Q 013910 20 LEPLYFIFAFSRMSILGGALVTFVAGLLSAF--SPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVP-------PSNRGK 89 (434)
Q Consensus 20 ~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~--~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p-------~~~Rg~ 89 (434)
+.+++.||+|+|+.+..+.....+......+ .++...+++.-++.|++.+... ...+.++|..+ ++..|.
T Consensus 283 ~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~ 362 (444)
T PRK09669 283 LSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGL 362 (444)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchH
Confidence 4457999999999999887766654433322 3467778888899999887653 34556666654 334567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 013910 90 WMVVFSTFWTFGSVSEAALAWIVM 113 (434)
Q Consensus 90 ~~~~~~~~~~~G~~l~~~l~~~~~ 113 (434)
..+.......+|..+++.++..+.
T Consensus 363 ~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 363 VFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888888887776653
No 238
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.37 E-value=0.0013 Score=54.98 Aligned_cols=93 Identities=15% Similarity=0.137 Sum_probs=76.2
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
+..|...+++|.|++++++.+.+.+.... -+-++...++.+-.+.|+|.+...+. ..|++|...++.|++..+++-..
T Consensus 55 l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i 133 (156)
T PF05978_consen 55 LFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAI 133 (156)
T ss_pred HhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHH
Confidence 77899999999999999999998866543 35667889999999999998876543 46889999999999999887777
Q ss_pred HHHHHHHHHHHHHHH
Q 013910 98 WTFGSVSEAALAWIV 112 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~ 112 (434)
...+.+.|+.+.+++
T Consensus 134 ~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 134 FQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777777665544
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.29 E-value=0.0034 Score=61.80 Aligned_cols=129 Identities=12% Similarity=0.112 Sum_probs=82.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSM 355 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~ 355 (434)
.+.-.++++..+..+.+.+|+|+-+++.++......=++.+...+++|...-+=..........|...-.|.+...|++.
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l 492 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL 492 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 45557788888999999999999999888766666555555555555433222222222333456677789999999999
Q ss_pred hhhHHhHHHHhh-hHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 013910 356 RSTGAGVAYAVG-RIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVV 404 (434)
Q Consensus 356 R~~a~gi~~~~~-~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~ 404 (434)
|+++.++....- .+|-.++.++.+.+....+....+-++++.|++..+.
T Consensus 493 ~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 493 RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred hHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHH
Confidence 999999986652 2333344444444444455545555555555444433
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.28 E-value=0.001 Score=63.59 Aligned_cols=126 Identities=16% Similarity=0.160 Sum_probs=98.2
Q ss_pred CCchhhhhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchh-hhhhhhhccCCCcchhHH
Q 013910 13 DMCPKLLLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWM 91 (434)
Q Consensus 13 ~~~~~~~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~ 91 (434)
..| ++.|++.||+|-|+++..+.+++++..+...+...-..+.++=.+.|...|+... .-+|+.+..|+++-|+..
T Consensus 303 lg~---ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fF 379 (438)
T COG2270 303 LGA---IIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFF 379 (438)
T ss_pred HHH---HHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcccccee
Confidence 456 8899999999999999999999999998888887777888888999999998764 567999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHHhcCC
Q 013910 92 VVFSTFWTFGSVSEAALAWIVMPI-LTWRWLLALSAIPAFVLLIFIVFMPE 141 (434)
Q Consensus 92 ~~~~~~~~~G~~l~~~l~~~~~~~-~~Wr~~f~~~~i~~~l~~~~~~~lpE 141 (434)
++++...-.++.++|.+...+.+. .+=|.-+....+...+-++....+|+
T Consensus 380 glyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~ 430 (438)
T COG2270 380 GLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKV 430 (438)
T ss_pred ehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecC
Confidence 999999999999999876665442 23555444433333333333444554
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.21 E-value=0.0012 Score=64.79 Aligned_cols=116 Identities=15% Similarity=0.070 Sum_probs=96.8
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHH-HHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVF-STFWTF 100 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~-~~~~~~ 100 (434)
.+..++||-+++.+++....+=-+..+..+|.++-+-..+++|+..+... +..+|++..+||+.|..+.++. .....+
T Consensus 428 klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~Gl 507 (618)
T KOG3762|consen 428 KLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGL 507 (618)
T ss_pred HHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhccc
Confidence 57789999999999988877766777888999999999999999998875 5567999999999999999876 556778
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHh
Q 013910 101 GSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVF 138 (434)
Q Consensus 101 G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~ 138 (434)
|--+|+++++.+....+=|..|.+.++.+++.+..+..
T Consensus 508 G~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 508 GKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred CcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 88888999888888888888888888777766554443
No 242
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.17 E-value=0.0025 Score=63.15 Aligned_cols=125 Identities=18% Similarity=0.150 Sum_probs=73.1
Q ss_pred HHHHHHHH----hhchhHHHH-HHHHHHHHHHHHHHhhhh----hHH----HHHHHHHHHHHHhhhhhhhhhhcccccCC
Q 013910 287 LTAALLVD----RVGRKLSMT-IMFIFVCIFLLPLVTLQS----NIL----LTALLSGARMFSMGTFIIANIFAPEIYPT 353 (434)
Q Consensus 287 ~~~~~l~d----r~gRR~~~~-~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~El~P~ 353 (434)
.+.|.++| |.|||+..+ .+....++....+....+ ... ..+.......+.........++.+|+.++
T Consensus 55 p~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~ 134 (428)
T PF13347_consen 55 PLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPD 134 (428)
T ss_pred CcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcccccc
Confidence 36677889 789887665 455555554444432211 111 11111111111112223456688899985
Q ss_pred -CchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHHHHHHhcccc
Q 013910 354 -SMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 411 (434)
Q Consensus 354 -~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g-------~~~~~~~~~~~~~i~~~~~~~~~~e 411 (434)
+.|....+....++.+|+.+...+.+.+.+..+ ......+++++..++.++..+..+|
T Consensus 135 ~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 135 PDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 689999999988888888766666665554333 2233455666667777777777777
No 243
>PRK11462 putative transporter; Provisional
Probab=97.09 E-value=0.028 Score=56.31 Aligned_cols=131 Identities=14% Similarity=0.100 Sum_probs=70.7
Q ss_pred hhhhHHHHHHHHHHh----hchhHHHHH-HHHHHHHHHHHHHhhh----hh--HHHHHHHHHHHHHHhhhhhhhhhhccc
Q 013910 281 AELPGLLTAALLVDR----VGRKLSMTI-MFIFVCIFLLPLVTLQ----SN--ILLTALLSGARMFSMGTFIIANIFAPE 349 (434)
Q Consensus 281 ~~~~g~~~~~~l~dr----~gRR~~~~~-~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E 349 (434)
...+.-.+.|.++|| +|||+..+. +.+..++....+.... .. .+..........+........+++.+|
T Consensus 57 ~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~ 136 (460)
T PRK11462 57 LDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGV 136 (460)
T ss_pred HHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 334555667899996 588776654 4445554444333211 11 111111111111111222345667888
Q ss_pred ccC-CCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHHHHHHhcccc
Q 013910 350 IYP-TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH-------QTAAILLLEALIVLSVVVILLIPFE 411 (434)
Q Consensus 350 l~P-~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g-------~~~~~~~~~~~~~i~~~~~~~~~~e 411 (434)
+.+ .+.|++..+.-...+.+|+.+++.+...+....+ ......+++++.+++.++.+...+|
T Consensus 137 lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 137 ITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 888 5889999999999999988887776655544332 1122334455545555555544444
No 244
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.09 E-value=0.0085 Score=54.26 Aligned_cols=121 Identities=18% Similarity=0.156 Sum_probs=84.3
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhc-------ccHHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCcchhH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFS-------PNYISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSNRGKW 90 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~-------~~~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~Rg~~ 90 (434)
++..+..|++|.+.++.++.+...++-.....+ ++++.+.+.-++.|.|.+.. .+...-..+.+| ++||.+
T Consensus 54 ~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~v 132 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTV 132 (250)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCce
Confidence 344578999999999999999988887655332 35677777777776664432 222222346777 589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcC
Q 013910 91 MVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMP 140 (434)
Q Consensus 91 ~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lp 140 (434)
.++.-....++..+-..+...+-+...-+.+......|.++.++..+++.
T Consensus 133 vgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 133 VGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred ehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 99999999998887766665555556677777777777776655555543
No 245
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.08 E-value=0.0032 Score=58.53 Aligned_cols=121 Identities=14% Similarity=0.215 Sum_probs=85.0
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMVVFSTFWTFGS 102 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~ 102 (434)
..+|-.==|+++++-.+..........+.++...+=+.-+.-|...+...+.++|+-+..+|+++.+..+......-.|.
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~ 143 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGK 143 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHh
Confidence 36675534677766666666667777888888888888888888777776777888899999999999999988888899
Q ss_pred HHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHHHhcCCCh
Q 013910 103 VSEAALAWIVMPIL--TWRWLLALSAIPAFVLLIFIVFMPESP 143 (434)
Q Consensus 103 ~l~~~l~~~~~~~~--~Wr~~f~~~~i~~~l~~~~~~~lpESp 143 (434)
..+..++..+.... +++.+=.+.-....+......++|.-|
T Consensus 144 ~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 144 FVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 88888887765433 344433343333333334455666554
No 246
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.99 E-value=0.019 Score=56.57 Aligned_cols=95 Identities=21% Similarity=0.243 Sum_probs=70.3
Q ss_pred hhhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcc--cHHHHHHHHHHHHhcCCCch-hhhhh------hhhccCCCcc-
Q 013910 18 LLLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSP--NYISLLILRGLAGAGLGSGH-VFFSW------FMEFVPPSNR- 87 (434)
Q Consensus 18 ~~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~R~l~Gig~g~~~-~~~~~------~~E~~p~~~R- 87 (434)
..+.|.+++|+|+|+++.++.+++.++.++.-+.+ +....++..++.++|.+... ...+. ..|+-..++|
T Consensus 289 ~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~e 368 (467)
T COG2211 289 LILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRRE 368 (467)
T ss_pred HHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCch
Confidence 34668899999999999999999999998887765 78889999999998877642 33333 2355444444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 88 GKWMVVFSTFWTFGSVSEAALAWIV 112 (434)
Q Consensus 88 g~~~~~~~~~~~~G~~l~~~l~~~~ 112 (434)
|...+......=+|..++..+..+.
T Consensus 369 Gi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 369 GIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667777777777777777655443
No 247
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.81 E-value=0.28 Score=48.96 Aligned_cols=44 Identities=7% Similarity=-0.151 Sum_probs=38.7
Q ss_pred hhh-hhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 339 TFI-IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 339 ~~~-~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
..+ +.|.+.+|+++++.-.+-.++....+++|.++++.+..++.
T Consensus 145 vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 145 VLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344 78999999999999999999999999999999998877655
No 248
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.59 E-value=0.078 Score=55.22 Aligned_cols=123 Identities=18% Similarity=0.178 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHHHHHhhh---hhhhhhhcccccCC
Q 013910 284 PGLLTAALLVDR-VGRKLSMTIMFIFVCIFLLPLVTLQ------SNILLTALLSGARMFSMGT---FIIANIFAPEIYPT 353 (434)
Q Consensus 284 ~g~~~~~~l~dr-~gRR~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~El~P~ 353 (434)
+..+++++++|+ +||++.+.++.++..+....+.... .......+...+ +...|. =+.......|.++.
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa-Lia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA-LIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH-HHHhhccccccCchhhhHhhcCc
Confidence 345678889996 6999988877666554333222210 001111111111 111122 23455566677764
Q ss_pred C---chhhHHhHHHHhhhHhHhhHHHHHHHHhhhc-------chhhHHHHHHHHHHHHHHHHHh
Q 013910 354 S---MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSC-------HQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 354 ~---~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~-------g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
+ .|...+.+.++.+++|+++++.+.+++.+.. +....+.+.+++++++.++...
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3 4788899999999999999999888776432 2334555555555655555443
No 249
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.58 E-value=0.19 Score=47.66 Aligned_cols=133 Identities=19% Similarity=0.085 Sum_probs=67.5
Q ss_pred hhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhh--hh---hcccccCCCch
Q 013910 282 ELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIA--NI---FAPEIYPTSMR 356 (434)
Q Consensus 282 ~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~El~P~~~R 356 (434)
..+-..+.|.++||+|||+..+..+++-.+..+.--..+...+...-+..+. .....++.. |. ....=+|.+-.
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGi-aTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGI-ATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 3444556678999999999877665555544432211111111111111111 111111111 11 12234555555
Q ss_pred hhHHhHHHHh-hhHhHhhHHHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 013910 357 STGAGVAYAV-GRIGGMVCPLVAVGLVTSCH--QTAAILLLEALIVLSVVVILLIPFETKGK 415 (434)
Q Consensus 357 ~~a~gi~~~~-~~ig~~~~p~~~~~l~~~~g--~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 415 (434)
+.-++..... +.+.++.+..+...+.+..+ .-.|+..-..+..++.+++...-+|..|.
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 5555544422 33455666666655555443 35677776777777777777666676554
No 250
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.48 E-value=0.02 Score=54.10 Aligned_cols=106 Identities=10% Similarity=0.044 Sum_probs=70.3
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHH
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTF 97 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~ 97 (434)
++.....||+|+|+.+.++..+..++.++....++...+ .+=++.|++.+... ...+...+..|++ .+...++.. .
T Consensus 196 ~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~ 272 (310)
T TIGR01272 196 FIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGILC-L 272 (310)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-H
Confidence 344468999999999888887777766555555543332 34446777776653 4455555666654 455666654 4
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 013910 98 WTFGSVSEAALAWIVMPILTWRWLLALSAI 127 (434)
Q Consensus 98 ~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i 127 (434)
..+|..+.|.+.+.+.+..+-+..|++..+
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 557888888888887777788888775433
No 251
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.39 E-value=1.2 Score=44.21 Aligned_cols=44 Identities=20% Similarity=0.232 Sum_probs=31.3
Q ss_pred hhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 340 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 340 ~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
+....++-+.+..+.+-||-+.+-|.++++||---..+.-+++|
T Consensus 423 FVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 423 FVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 34455666788889999999999999999988543333344443
No 252
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.29 E-value=0.3 Score=44.25 Aligned_cols=89 Identities=22% Similarity=0.199 Sum_probs=60.8
Q ss_pred hhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCch-hhhhh-hhhccCCCcchhH----HHHH
Q 013910 21 EPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGH-VFFSW-FMEFVPPSNRGKW----MVVF 94 (434)
Q Consensus 21 ~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~-~~~~~-~~E~~p~~~Rg~~----~~~~ 94 (434)
+..+.|+-|||+.-+..++.++++++ +-.++.|-.++++|.+-|++...-. ..-+| ++|.- ++||.- ...+
T Consensus 92 vgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TF 168 (454)
T KOG4332|consen 92 VGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTF 168 (454)
T ss_pred HHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHH
Confidence 34589999999998888887777664 6778999999999999999876543 33455 45765 344433 3334
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 013910 95 STFWTFGSVSEAALAWIV 112 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~ 112 (434)
.=+..+|.-+.+.+++..
T Consensus 169 skA~ffgNglvAiiaGlf 186 (454)
T KOG4332|consen 169 SKAVFFGNGLVAIIAGLF 186 (454)
T ss_pred HHHHHhhccHHHHHHHHH
Confidence 444555665555555544
No 253
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.26 E-value=0.044 Score=54.38 Aligned_cols=129 Identities=24% Similarity=0.225 Sum_probs=77.8
Q ss_pred HHHHHHHHhh-----chhHHHHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC--c
Q 013910 287 LTAALLVDRV-----GRKLSMTIMFIFVCIFLLPLVTLQ----SNILLTALLSGARMFSMGTFIIANIFAPEIYPTS--M 355 (434)
Q Consensus 287 ~~~~~l~dr~-----gRR~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~--~ 355 (434)
.+.|.++|-+ .||..++++.+++.+....+.... +......+.+...+.....-.+......|....+ .
T Consensus 42 p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 42 PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 4567899976 455666667666654444333211 1122222333333322233344566666766332 2
Q ss_pred hhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhcccccCCc
Q 013910 356 RSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLIPFETKGK 415 (434)
Q Consensus 356 R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~et~~~ 415 (434)
|+.-.+.++.+..+|++++..+.+.+.+..+....+.+.+.+..+..+..+++.+|.+.+
T Consensus 122 ~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~ 181 (433)
T PF03092_consen 122 RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVR 181 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcccc
Confidence 677778888888889999888888887766655566677777777777777887774333
No 254
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.15 E-value=0.043 Score=53.27 Aligned_cols=91 Identities=19% Similarity=0.128 Sum_probs=60.1
Q ss_pred hhhhh---hHh----hhcchHHHHHHHHHHH-HHHHHHhhcccHHH------------HHHHHHHHHhcC---CCch---
Q 013910 19 LLEPL---YFI----FAFSRMSILGGALVTF-VAGLLSAFSPNYIS------------LLILRGLAGAGL---GSGH--- 72 (434)
Q Consensus 19 ~~~~~---~~~----~~GRr~~l~~~~~~~~-i~~~~~~~~~~~~~------------l~~~R~l~Gig~---g~~~--- 72 (434)
++||. .+| ||||||.++....+.. ++.++..++.++.. .-+.-++.|+.. +.+.
T Consensus 82 ~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qg 161 (498)
T KOG0637|consen 82 LVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQG 161 (498)
T ss_pred eecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhh
Confidence 56774 666 8999999988777665 44566677765543 334445555432 2221
Q ss_pred hhhhhhhhccCCCcchh-HHHHHHHHHHHHHHHHHHHH
Q 013910 73 VFFSWFMEFVPPSNRGK-WMVVFSTFWTFGSVSEAALA 109 (434)
Q Consensus 73 ~~~~~~~E~~p~~~Rg~-~~~~~~~~~~~G~~l~~~l~ 109 (434)
..-+++.+.+..++|.+ +.+.+..+..+|..+|..++
T Consensus 162 p~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 162 PCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred hHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 23357777777766666 88899999999988776654
No 255
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.12 E-value=1.6 Score=43.09 Aligned_cols=100 Identities=18% Similarity=0.136 Sum_probs=62.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH----Hhhhhh--HHHHHHHHHHHHHH-hhhh--h-hhhh
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPL----VTLQSN--ILLTALLSGARMFS-MGTF--I-IANI 345 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~-~~~~--~-~~~~ 345 (434)
-+..+.++.|+++..++.+|+|..+.-+.+......++... ....++ ......++.+.... .|.+ . ...-
T Consensus 300 ~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~q 379 (432)
T PF06963_consen 300 GLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQ 379 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 45567788999999999999998887766655544333221 112211 22222222222111 1222 1 3455
Q ss_pred hcccccCCCchhhHHhHHHHhhhHhHhhHH
Q 013910 346 FAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 375 (434)
Q Consensus 346 ~~~El~P~~~R~~a~gi~~~~~~ig~~~~p 375 (434)
+..|..|.+.|++-.|+=++..++.-.+.-
T Consensus 380 i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 380 IMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred hhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999888766543
No 256
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.06 E-value=0.11 Score=50.52 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=64.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHH-HHH-h---hhhhHHHHHHHHHHHHHH-hhhhh--hhhhhc
Q 013910 276 FITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLL-PLV-T---LQSNILLTALLSGARMFS-MGTFI--IANIFA 347 (434)
Q Consensus 276 ~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~-~~~-~---~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~ 347 (434)
.+..+..++-.+.+.|+.||.|-|....++....++... -+. . .++....-+...+..... ..++. +..-+.
T Consensus 86 mIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA 165 (480)
T KOG2563|consen 86 MIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIA 165 (480)
T ss_pred HHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHH
Confidence 344566677788899999999999998887766655322 111 1 111112111222221111 11111 122345
Q ss_pred ccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 348 PEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 348 ~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
.--||+..|++|..++.+.+.+|..++..+-+.+..
T Consensus 166 ~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 166 AVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred HhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 567899999999999999988888777665554443
No 257
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.73 E-value=0.06 Score=52.24 Aligned_cols=105 Identities=20% Similarity=0.220 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHH---hhcccH------HHHHHHHHHHHhcCCCch-hhhhhhhhccCCCc---chhHHHHHHHHH
Q 013910 32 MSILGGALVTFVAGLLS---AFSPNY------ISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSN---RGKWMVVFSTFW 98 (434)
Q Consensus 32 ~~l~~~~~~~~i~~~~~---~~~~~~------~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~---Rg~~~~~~~~~~ 98 (434)
++++++.++..++.++. +..++. ..++++-++.++|.|+.- ...+...|-+++++ |.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888887763 222333 579999999999998874 45567778777763 455566788899
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q 013910 99 TFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFI 136 (434)
Q Consensus 99 ~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~ 136 (434)
++|..++..+...+-++.+|.+.|.+.++..++.+...
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 99999988887777788999999999887766654433
No 258
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.62 E-value=0.33 Score=48.24 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=76.1
Q ss_pred HHHhhhhhHHHHHHHHHHhhch-hHHHHHHHHHHHHHHHHH-Hh-hhhhHHHHHHHHHHHHH-H--hhhhhhhhhhcccc
Q 013910 277 ITSFAELPGLLTAALLVDRVGR-KLSMTIMFIFVCIFLLPL-VT-LQSNILLTALLSGARMF-S--MGTFIIANIFAPEI 350 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gR-R~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~El 350 (434)
..+++..+++++.++...|.+. |+.++++.+++.+..+.. .. ...+.... +.+.+.++ . .+.....-.|.+..
T Consensus 79 a~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y-~mL~~R~l~Gvg~~n~a~lR~Y~a~~ 157 (488)
T KOG2325|consen 79 ASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKY-LMLVARILTGVGVGNFAVLRAYIADA 157 (488)
T ss_pred HHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHH-HHHHHHHHcCcCcccHHHHHHHHHhc
Confidence 4557788888899999999884 555555555555433222 21 11111111 22223222 1 23345566777775
Q ss_pred cCCCchhhHHhHHHHhhhHhHhhHHHHHHH---Hhhh---------cc-hhhHHHHHHHHHHHHHHHHHhcccccCC
Q 013910 351 YPTSMRSTGAGVAYAVGRIGGMVCPLVAVG---LVTS---------CH-QTAAILLLEALIVLSVVVILLIPFETKG 414 (434)
Q Consensus 351 ~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~---l~~~---------~g-~~~~~~~~~~~~~i~~~~~~~~~~et~~ 414 (434)
--.+.|.+|++.....--+|.+++|.+... +.+. .+ .+.+.++++...++..+++.++..|...
T Consensus 158 s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 158 STVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred cCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 556666666666655434444555544332 2211 11 2466788888888888888877766543
No 259
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.45 E-value=0.2 Score=52.27 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=73.0
Q ss_pred hhcchHHHHHHHHHHHHHHHHHhhccc--------HHHHHHHHHHHHhcCCCc-hhhhhhhhhccCCCc---chhHHHHH
Q 013910 27 FAFSRMSILGGALVTFVAGLLSAFSPN--------YISLLILRGLAGAGLGSG-HVFFSWFMEFVPPSN---RGKWMVVF 94 (434)
Q Consensus 27 ~~GRr~~l~~~~~~~~i~~~~~~~~~~--------~~~l~~~R~l~Gig~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~ 94 (434)
++||++++.++.++..++..+.++... ...++++=.+..+|.|+. +...+...|-.++++ |-....++
T Consensus 50 ~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~f 129 (654)
T TIGR00926 50 WLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFF 129 (654)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHH
Confidence 899999999999999888877665421 123555666666677765 334445566665543 44556666
Q ss_pred HHHHHHHHHHHHHHHHHHhc-------ccchHHHHHHHHHHHHHHHHH
Q 013910 95 STFWTFGSVSEAALAWIVMP-------ILTWRWLLALSAIPAFVLLIF 135 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~-------~~~Wr~~f~~~~i~~~l~~~~ 135 (434)
..+.++|++++..+...+.. ..+|...|.+.++..++..++
T Consensus 130 Y~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 130 YFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 77777888877776655542 246999999988776665443
No 260
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.15 E-value=1.1 Score=40.42 Aligned_cols=55 Identities=15% Similarity=0.291 Sum_probs=36.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHH-----hcccchHHHHHHHHHHHHHHHHHHHh
Q 013910 84 PSNRGKWMVVFSTFWTFGSVSEAALAWIV-----MPILTWRWLLALSAIPAFVLLIFIVF 138 (434)
Q Consensus 84 ~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~-----~~~~~Wr~~f~~~~i~~~l~~~~~~~ 138 (434)
.|+|+..+.+...++++|.++....-..- ....+||+++.+.++..++.++.+..
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788888888889999988765432111 11346999999887776665554443
No 261
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.91 E-value=4.6 Score=40.40 Aligned_cols=39 Identities=3% Similarity=0.003 Sum_probs=33.4
Q ss_pred hhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 013910 75 FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVM 113 (434)
Q Consensus 75 ~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~ 113 (434)
..+.+|.++.++=.+..+++..+.++|.++++.+...+.
T Consensus 151 W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 151 WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999999998776654
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.89 E-value=0.93 Score=37.87 Aligned_cols=104 Identities=14% Similarity=0.068 Sum_probs=61.3
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCC
Q 013910 275 VFITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTS 354 (434)
Q Consensus 275 ~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~ 354 (434)
..+......+.+++++.+.+++|.|+.++++.+.-.+................-.+.+ +.....+.....+..+..+.+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G-~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLG-FGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHh-hhhHHhhHhhhHHHHHcCCHH
Confidence 3333444556677888999999999999988776665554433222111111111111 111122344445667777888
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHHH
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVAV 379 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~~ 379 (434)
.|++-.|+...+...+.+.+..+..
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777776666665443
No 263
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=94.63 E-value=0.49 Score=45.63 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=39.5
Q ss_pred hhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcc
Q 013910 340 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCH 386 (434)
Q Consensus 340 ~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g 386 (434)
.+...+..+|..|++.|+++.++.+.+--+|-+++..+.+.+.+...
T Consensus 107 ~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 107 GTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred HHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 34567788999999999999999999988888888888887776543
No 264
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.35 E-value=5.2 Score=38.50 Aligned_cols=44 Identities=20% Similarity=0.232 Sum_probs=33.4
Q ss_pred hhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 340 FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 340 ~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
+....+.-+.+.++..-+|-+.+-|..+++|+---..+...+.|
T Consensus 387 fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 387 FVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 34455677899999999999999999999987554444555554
No 265
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.89 E-value=0.31 Score=44.61 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=68.8
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchh-hhhhhhhccCCCcchhHHHHHHHHHHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFG 101 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G 101 (434)
..+|++||+...+.+..+..+.+-. ...-++..-+++-.+.|++...-.+ ..+.++-..|.++-|++.++.+...++|
T Consensus 322 ~i~Dk~G~n~~wv~~a~~~tl~~H~-~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLg 400 (459)
T KOG4686|consen 322 AISDKYGFNLWWVASACILTLLGHS-GLFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLG 400 (459)
T ss_pred HhHhhhcceehhHHHHHHHHHHHhh-hHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhh
Confidence 3689999887776665555444321 1112233345556667766433221 2334567789999999999999999999
Q ss_pred HHHHHHHHHHHhcccc---hHHHHHHHHHH
Q 013910 102 SVSEAALAWIVMPILT---WRWLLALSAIP 128 (434)
Q Consensus 102 ~~l~~~l~~~~~~~~~---Wr~~f~~~~i~ 128 (434)
..+.+.++..+.+..| |--.|++....
T Consensus 401 la~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 401 LAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred hhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 9999999998876544 55566655443
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.44 E-value=9.5 Score=38.40 Aligned_cols=42 Identities=14% Similarity=-0.056 Sum_probs=37.1
Q ss_pred hhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHhh
Q 013910 342 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 342 ~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~ 383 (434)
+.|.+.+|+++.+...+-.++....+++|.++++.+..++..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999998877766554
No 267
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.14 E-value=1.2 Score=40.61 Aligned_cols=105 Identities=25% Similarity=0.250 Sum_probs=58.7
Q ss_pred HhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHhhhhhhhhhhcccccCC-Cc
Q 013910 279 SFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQS--NILLTALLSGARMFSMGTFIIANIFAPEIYPT-SM 355 (434)
Q Consensus 279 ~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~-~~ 355 (434)
.+....+....|.+.||.|||+.+..+........+....... ............+......+....+.+|.+|. +.
T Consensus 49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 128 (338)
T COG0477 49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE 128 (338)
T ss_pred HHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH
Confidence 3444556688999999999997776655432221111111111 11111111111112223455677888899998 66
Q ss_pred hhhHHhHHHH-hhhHhHhhHHHHHHHHhh
Q 013910 356 RSTGAGVAYA-VGRIGGMVCPLVAVGLVT 383 (434)
Q Consensus 356 R~~a~gi~~~-~~~ig~~~~p~~~~~l~~ 383 (434)
|+...+.... ...++..++|.+.+.+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 129 RGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777 456667777755554443
No 268
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=90.23 E-value=4 Score=38.92 Aligned_cols=117 Identities=18% Similarity=0.159 Sum_probs=71.2
Q ss_pred hhhhhhhHhh-hcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhh-hhhhh-hccCCCcchhHHHHH
Q 013910 18 LLLEPLYFIF-AFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFM-EFVPPSNRGKWMVVF 94 (434)
Q Consensus 18 ~~~~~~~~~~-~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~-~~~~~-E~~p~~~Rg~~~~~~ 94 (434)
-++.|+..+| --||+........+.++.+...+.+.-.-+.- -++.|+|.|..... ...+. -...+++-+...++.
T Consensus 260 ~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgma 338 (395)
T COG2807 260 ALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMA 338 (395)
T ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHh
Confidence 4788988885 44566666666666666666666664333333 38999998886543 33333 334445556666666
Q ss_pred HHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHHHHHHHH
Q 013910 95 STFWTFGSVSEAALAWIVMP-ILTWRWLLALSAIPAFVLLIF 135 (434)
Q Consensus 95 ~~~~~~G~~l~~~l~~~~~~-~~~Wr~~f~~~~i~~~l~~~~ 135 (434)
|...++=...+|.+.+++-+ ..+|+..........++..+.
T Consensus 339 Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 339 QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 65444444455555555533 457999888776666655443
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=88.85 E-value=4.9 Score=28.99 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhchhHHHHHHHH
Q 013910 271 VYINVFITSFAELPGLLTAALLVDRVGRKLSMTIMFI 307 (434)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~ 307 (434)
......+.-+..+++..+.|.++||.+|++.......
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3444445557788899999999999999987766543
No 270
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=88.67 E-value=26 Score=34.39 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=59.9
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHhhhhhhhhhhcccccCCCchhhHHhHHHH
Q 013910 287 LTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTAL-LSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGVAYA 365 (434)
Q Consensus 287 ~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi~~~ 365 (434)
+....++|.+|-|+.++.+.+...+.-..+.+..+....-.. ++.+. ..+.-...+.+.=-..|++.-.++.+.+.+
T Consensus 59 ~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~--~~a~evay~sYiys~v~~~~yq~vts~~ra 136 (412)
T PF01770_consen 59 LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGL--ATAAEVAYYSYIYSVVDKEHYQKVTSYTRA 136 (412)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHH--HHHHHHHHHHHheeecCHHHHHHHHHHHHH
Confidence 456689999999999988765544433323332221111111 11110 112222233444445577776777777777
Q ss_pred hhhHhHhhHHHHHHHHhhhcc-hhhHH-HHHHHHHHHHHHHHHhcccc
Q 013910 366 VGRIGGMVCPLVAVGLVTSCH-QTAAI-LLLEALIVLSVVVILLIPFE 411 (434)
Q Consensus 366 ~~~ig~~~~p~~~~~l~~~~g-~~~~~-~~~~~~~~i~~~~~~~~~~e 411 (434)
..-+|.+++..+.-.++...+ ++... .+-.+...++.++.+++|+-
T Consensus 137 a~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 137 ATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 665555555544333333222 22222 23234445566666666543
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=84.70 E-value=4 Score=39.73 Aligned_cols=64 Identities=23% Similarity=0.211 Sum_probs=52.5
Q ss_pred hhcccHHHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 49 AFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 112 (434)
Q Consensus 49 ~~~~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 112 (434)
-+.+|.+..++.-+..|+--|..++. ...+.|-.|+++|...++....+-+.|.++++.++..+
T Consensus 330 ~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 330 RFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34678888888999999877776654 44567888999999999999999999999998887654
No 272
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=84.12 E-value=55 Score=33.79 Aligned_cols=125 Identities=14% Similarity=0.178 Sum_probs=76.0
Q ss_pred hhHh-hhcchHHHHHHHHHHHHHHHHHhhccc-------------------------HHHHHHHHHHHHhcCCCc-hhhh
Q 013910 23 LYFI-FAFSRMSILGGALVTFVAGLLSAFSPN-------------------------YISLLILRGLAGAGLGSG-HVFF 75 (434)
Q Consensus 23 ~~~~-~~GRr~~l~~~~~~~~i~~~~~~~~~~-------------------------~~~l~~~R~l~Gig~g~~-~~~~ 75 (434)
+..| ..||-+++.++.++..++..+...+.. ...++.+.-+..+|.|+- +...
T Consensus 95 ~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~ 174 (571)
T KOG1237|consen 95 FLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLL 174 (571)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcch
Confidence 4555 678999999999888877543322110 124666666666777764 2333
Q ss_pred hhhhhccC----CCcch--hHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCChhHHhhc
Q 013910 76 SWFMEFVP----PSNRG--KWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTK 149 (434)
Q Consensus 76 ~~~~E~~p----~~~Rg--~~~~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp~~l~~~ 149 (434)
.+-+|-.+ ++.++ ....++....+.|.+++..+.-..-++.+|.+-|.+..+..++.++ .+++-+|.|...+
T Consensus 175 ~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~--iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 175 AFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL--IFLPGFPFYRYKK 252 (571)
T ss_pred hhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH--HHHcCceeEEeeC
Confidence 34344444 44444 4567788888888887766544444678999999887665554333 3445555555444
No 273
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=81.73 E-value=8.6 Score=37.17 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=49.3
Q ss_pred hhhhhhcccccCCC---chhhHHhHHHHhhhHhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhc
Q 013910 341 IIANIFAPEIYPTS---MRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILLI 408 (434)
Q Consensus 341 ~~~~~~~~El~P~~---~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 408 (434)
+....+.+|.++++ .|..++...+...++|+.+++...+++.+..+....+.+.++.++++.+..+.-
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 44566777888775 467788888999999999999888888777666667777666666665554443
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.44 E-value=65 Score=32.04 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=25.5
Q ss_pred HHhhh-hhhhhhhcccccCCCchhhHHhHHHHhhhHhHhhHH
Q 013910 335 FSMGT-FIIANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCP 375 (434)
Q Consensus 335 ~~~~~-~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p 375 (434)
+..|. .+....+.++..+++.|-.|..+...+-.+|-.++.
T Consensus 384 ltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 384 FSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred HhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33443 345666778888888887776666665544444433
No 275
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=79.13 E-value=26 Score=35.17 Aligned_cols=22 Identities=5% Similarity=0.208 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHhccccc
Q 013910 391 ILLLEALIVLSVVVILLIPFET 412 (434)
Q Consensus 391 ~~~~~~~~~i~~~~~~~~~~et 412 (434)
..+.+.+.++..+.+.++..|.
T Consensus 203 l~fwg~~~l~~T~~v~~~k~E~ 224 (544)
T PF13000_consen 203 LKFWGWVFLIVTILVAFFKKEK 224 (544)
T ss_pred HHHHHHHHHHHHHHHheEeecc
Confidence 4466777777777777877664
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=70.57 E-value=5.6 Score=37.08 Aligned_cols=123 Identities=18% Similarity=0.149 Sum_probs=63.1
Q ss_pred cCCCCchhhhhhhhhHhhh--cchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcc
Q 013910 10 LHPDMCPKLLLEPLYFIFA--FSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNR 87 (434)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~--GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~R 87 (434)
+|-..| +...|++.||+ |-|- .+..++.+.+-++.++++|.++=+.+-.+..++-|.+.+...-++-.+|+.--
T Consensus 73 lPsL~i--Kl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~i 148 (409)
T KOG3880|consen 73 LPSLAI--KLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSIVI 148 (409)
T ss_pred hHHHHH--HHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCcee
Confidence 333444 45678999865 4343 33334455566777999999988888888877777654433223333333332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---ccchHHHHHHHH-HHHHHHHHHHHhcCC
Q 013910 88 GKWMVVFSTFWTFGSVSEAALAWIVMP---ILTWRWLLALSA-IPAFVLLIFIVFMPE 141 (434)
Q Consensus 88 g~~~~~~~~~~~~G~~l~~~l~~~~~~---~~~Wr~~f~~~~-i~~~l~~~~~~~lpE 141 (434)
..+ ..+...+.++|+ ..|...+ ..+=|....+.. +|.+.....++.+++
T Consensus 149 ~~W----SSGTGgAGliGa-~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 149 AGW----SSGTGGAGLIGA-SSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred ccc----cCCCCcchhhhh-hHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 222 222222223332 2343332 234566555554 454444444444443
No 277
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=66.24 E-value=11 Score=29.75 Aligned_cols=51 Identities=18% Similarity=0.329 Sum_probs=26.7
Q ss_pred hcccchHHHHHHHHHH-----HHH-HHHHHHhcCCChhHHhhcCChHHHHHHHHHHH
Q 013910 113 MPILTWRWLLALSAIP-----AFV-LLIFIVFMPESPRYLCTKGRITDAHNILDKIA 163 (434)
Q Consensus 113 ~~~~~Wr~~f~~~~i~-----~~l-~~~~~~~lpESp~~l~~~~~~~~a~~~l~~~~ 163 (434)
.+.+--|.++....+. +++ .++.++.+|+.|.....++..+.+.+.++++.
T Consensus 31 i~~~~VRl~~vl~~~~~~~~~~~~~Yi~l~~~lp~~P~~~~~~~~~~s~~~~l~~~~ 87 (118)
T PRK10697 31 VPVKLVRIIVVLSIFFGLFVFTLVAYIILSFALDPMPDNMAFGEQQPSSSELLDEVD 87 (118)
T ss_pred CCHHHHHHHHHHHHHHhhchHHHHHHHHHHHhccCCcccccccccCCCHHHHHHHHH
Confidence 3444456665544322 222 35567778888854333333445555555554
No 278
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=65.84 E-value=51 Score=24.30 Aligned_cols=44 Identities=11% Similarity=0.090 Sum_probs=29.9
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhh
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQ 320 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~ 320 (434)
.+.++.++|.+...++.++.++|+.+..+.+.+.+.+..+...+
T Consensus 35 aNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 35 ANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566677777777777776777777777777766666555443
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.97 E-value=78 Score=31.64 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=61.7
Q ss_pred HHHhhhhhHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HHhh-hhhhhhhhcccccCCC
Q 013910 277 ITSFAELPGLLTAALLVDRVGRKLSMTIMFIFVCIFLLPLVTLQSNILLTALLSGARM-FSMG-TFIIANIFAPEIYPTS 354 (434)
Q Consensus 277 ~~~~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~El~P~~ 354 (434)
+......+.+++++.+.|+++.|..+++++..-..+-....+.+ .+... ...+.. +..+ .+.-...+.+|-.+.+
T Consensus 58 iiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~y--fssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLY--FSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHH--HHHHHhhhhHHheecccceehhhcCChh
Confidence 33344556778889999999999999988765555544443333 11111 111111 1111 1223345788999999
Q ss_pred chhhHHhHHHHhhhHhHhhHHHHH
Q 013910 355 MRSTGAGVAYAVGRIGGMVCPLVA 378 (434)
Q Consensus 355 ~R~~a~gi~~~~~~ig~~~~p~~~ 378 (434)
.+.+..++..+++..+.+++..+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhh
Confidence 999999999999888777665443
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=60.75 E-value=37 Score=31.91 Aligned_cols=73 Identities=22% Similarity=0.140 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchhh-hhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 013910 38 ALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAW 110 (434)
Q Consensus 38 ~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~ 110 (434)
++++.+...+-.+.++++..++.-+.-|+=-|+.++. +.-+.+-.++++|-.+++....+-++|..+++.++.
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 3344444555567899998888888899866666654 334678889999999999999999999998887663
No 281
>PRK03612 spermidine synthase; Provisional
Probab=59.18 E-value=2.1e+02 Score=29.17 Aligned_cols=41 Identities=17% Similarity=0.112 Sum_probs=25.5
Q ss_pred hhHHhHHHHhhhHhHhhHHHHHHHHhh-hcchhhHHHHHHHH
Q 013910 357 STGAGVAYAVGRIGGMVCPLVAVGLVT-SCHQTAAILLLEAL 397 (434)
Q Consensus 357 ~~a~gi~~~~~~ig~~~~p~~~~~l~~-~~g~~~~~~~~~~~ 397 (434)
+...|-.++.+.+|+++++++.+.++- ..|.....++.+.+
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 455777888888888888877775543 44543333333333
No 282
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=57.72 E-value=28 Score=32.91 Aligned_cols=89 Identities=12% Similarity=0.152 Sum_probs=56.7
Q ss_pred hhhhhhHhhhcchHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHhcCCCchh-hhhhhhhccCC--Ccc--------
Q 013910 19 LLEPLYFIFAFSRMSILGGALVTFVAGLLSAFSPNYISLLILRGLAGAGLGSGHV-FFSWFMEFVPP--SNR-------- 87 (434)
Q Consensus 19 ~~~~~~~~~~GRr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~R~l~Gig~g~~~~-~~~~~~E~~p~--~~R-------- 87 (434)
...|....++|-|+++.++...+...-. .-+-+.+..+.-.-...|+|.++..+ ...|+++.... +.|
T Consensus 76 m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~ 154 (390)
T KOG3097|consen 76 MFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGM 154 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCce
Confidence 4557899999999999999888775543 23446788899999999999887532 23344433222 334
Q ss_pred -hhHHHHHHHHHHHHHHHHHHH
Q 013910 88 -GKWMVVFSTFWTFGSVSEAAL 108 (434)
Q Consensus 88 -g~~~~~~~~~~~~G~~l~~~l 108 (434)
.+..+.+...+..+..++..+
T Consensus 155 ~~~ffg~Ffii~~~~qv~gn~i 176 (390)
T KOG3097|consen 155 KVRFFGEFFIIFQCAQVWGNLI 176 (390)
T ss_pred eeeehhHHHHHHHHHHHHHHHH
Confidence 344455555554454444443
No 283
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=56.02 E-value=2.2e+02 Score=28.30 Aligned_cols=39 Identities=21% Similarity=0.232 Sum_probs=27.9
Q ss_pred HhHhhHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHh
Q 013910 369 IGGMVCPLVAVGLVTSCHQTAAILLLEALIVLSVVVILL 407 (434)
Q Consensus 369 ig~~~~p~~~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 407 (434)
+..+++|++.+.+....+......+.++..+++...=++
T Consensus 160 ~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 160 FCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 478899999998777556556666777777777655443
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=55.08 E-value=4.6 Score=38.03 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=2.4
Q ss_pred Hhhh-hhhhhhhcccccCCCchhhHHhHHHHhhhHh
Q 013910 336 SMGT-FIIANIFAPEIYPTSMRSTGAGVAYAVGRIG 370 (434)
Q Consensus 336 ~~~~-~~~~~~~~~El~P~~~R~~a~gi~~~~~~ig 370 (434)
.+|. .+....+.++..+++.|-.+-.+...+-.+|
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~G 296 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFG 296 (309)
T ss_dssp ------HHHH--------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 3443 3456677788888877777655555544333
No 285
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=55.02 E-value=31 Score=27.35 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=19.7
Q ss_pred hcccchHHHHHHHHHHH-----HH-HHHHHHhcCCChhH
Q 013910 113 MPILTWRWLLALSAIPA-----FV-LLIFIVFMPESPRY 145 (434)
Q Consensus 113 ~~~~~Wr~~f~~~~i~~-----~l-~~~~~~~lpESp~~ 145 (434)
.+..-.|..|.+..+.+ ++ .++.++.+|+.|.-
T Consensus 26 i~~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 26 VEVWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred cCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 34455788777654432 22 34566778888753
No 286
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=54.06 E-value=61 Score=26.84 Aligned_cols=81 Identities=17% Similarity=0.219 Sum_probs=49.9
Q ss_pred hhHhhhcchHHHHHHHHHHHHHHHHHhh----------cccHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcchhHHH
Q 013910 23 LYFIFAFSRMSILGGALVTFVAGLLSAF----------SPNYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRGKWMV 92 (434)
Q Consensus 23 ~~~~~~GRr~~l~~~~~~~~i~~~~~~~----------~~~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg~~~~ 92 (434)
..+||.-||..+..++-...-.+....+ .+++..+++.=.+.|+|.-+ ..|..++-.+.+++.|.+.|
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllG--isYGilSaSWD~~r~GSllG 133 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLG--ISYGILSASWDPEREGSLLG 133 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHh--hhhhhcccccCCCCCCCccc
Confidence 6889998888776665443322221111 34566666666666665422 11222444557888999999
Q ss_pred HHHHHHHHHHHHH
Q 013910 93 VFSTFWTFGSVSE 105 (434)
Q Consensus 93 ~~~~~~~~G~~l~ 105 (434)
+-++--+++.+.-
T Consensus 134 ~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 134 WEEFKRNWGRMWE 146 (153)
T ss_pred HHHHHHhHHHHHH
Confidence 9888888887653
No 287
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=53.82 E-value=17 Score=24.91 Aligned_cols=31 Identities=16% Similarity=0.390 Sum_probs=19.6
Q ss_pred hcccchHHHHHHHHHHH----HHHHHHHHhcCCCh
Q 013910 113 MPILTWRWLLALSAIPA----FVLLIFIVFMPESP 143 (434)
Q Consensus 113 ~~~~~Wr~~f~~~~i~~----~l~~~~~~~lpESp 143 (434)
.+..-+|..|.+..+.+ ++.++.++.+|+.|
T Consensus 26 id~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 26 IDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred cCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 34456888888776532 33355566788876
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=53.63 E-value=2.5e+02 Score=28.38 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=31.6
Q ss_pred hhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 013910 78 FMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 114 (434)
Q Consensus 78 ~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~ 114 (434)
..|.++.++=.+..+++..+.++|.++++.+...+.+
T Consensus 169 AN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 169 ANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999998877666544
No 289
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.37 E-value=56 Score=34.60 Aligned_cols=43 Identities=14% Similarity=0.274 Sum_probs=35.2
Q ss_pred hhhhhcccccCCCchhhHHhHHHHhhhH-hHhhHHHHHHHHhhh
Q 013910 342 IANIFAPEIYPTSMRSTGAGVAYAVGRI-GGMVCPLVAVGLVTS 384 (434)
Q Consensus 342 ~~~~~~~El~P~~~R~~a~gi~~~~~~i-g~~~~p~~~~~l~~~ 384 (434)
....+.--..|++.|+.|+|+..++-++ |.+-+|++++.++|.
T Consensus 606 p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 606 PGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred cceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 3455566888999999999999999885 667799999998864
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=45.96 E-value=56 Score=31.78 Aligned_cols=31 Identities=35% Similarity=0.495 Sum_probs=19.3
Q ss_pred HHHHHHHH-----hhchhHHHHH-HHHHHHHHHHHHH
Q 013910 287 LTAALLVD-----RVGRKLSMTI-MFIFVCIFLLPLV 317 (434)
Q Consensus 287 ~~~~~l~d-----r~gRR~~~~~-~~~~~~~~~~~~~ 317 (434)
+++..+.| |+|||+..++ +..+.+.++..+.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs 117 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLS 117 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHh
Confidence 44556666 9999998764 4445555544443
No 291
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=45.43 E-value=1.1e+02 Score=25.47 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=44.9
Q ss_pred HHHHhhchhHHHHHHHHHH-HHHHHHHHh-------hhhhHHHHHHHHHHHHHHhhhhhhhhhhcccccCCCchhhHHhH
Q 013910 291 LLVDRVGRKLSMTIMFIFV-CIFLLPLVT-------LQSNILLTALLSGARMFSMGTFIIANIFAPEIYPTSMRSTGAGV 362 (434)
Q Consensus 291 ~l~dr~gRR~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~P~~~R~~a~gi 362 (434)
.++||+-||..+..+.=.. ++..+.+.+ .+-+.+.+.+ ....+|..+...+.|.+.+-...++..++-.|+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~-~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~ 134 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLL-VSLVFFGLGLLGISYGILSASWDPEREGSLLGW 134 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHH-HHHHHHHHHHHhhhhhhcccccCCCCCCCcccH
Confidence 5679999998776542221 111111111 1112223222 222334456667788888878878878888888
Q ss_pred HHHhhhHhH
Q 013910 363 AYAVGRIGG 371 (434)
Q Consensus 363 ~~~~~~ig~ 371 (434)
-.+--+++-
T Consensus 135 ~e~~~N~~r 143 (153)
T PF11947_consen 135 EEFKRNWGR 143 (153)
T ss_pred HHHHHhHHH
Confidence 777655543
No 292
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=43.97 E-value=20 Score=24.57 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHHhcCCCchhhhhhhhhccCCCcch
Q 013910 53 NYISLLILRGLAGAGLGSGHVFFSWFMEFVPPSNRG 88 (434)
Q Consensus 53 ~~~~l~~~R~l~Gig~g~~~~~~~~~~E~~p~~~Rg 88 (434)
++..+......-|++.|.......+++|+.+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 455566666666677776666677889999886655
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.33 E-value=1.2e+02 Score=23.37 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=35.6
Q ss_pred CCchhhHHhHHHHhhhHhHhhHHHHHHHHhhhcch--hhHHHHHHHHHHHHHHHH
Q 013910 353 TSMRSTGAGVAYAVGRIGGMVCPLVAVGLVTSCHQ--TAAILLLEALIVLSVVVI 405 (434)
Q Consensus 353 ~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~~~~g~--~~~~~~~~~~~~i~~~~~ 405 (434)
++.++.+.++-.+.=.+++++.....++++|..-. ++.++++-.+.+++.+..
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ln 91 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 45677777877777788899988889999986432 344455555555444443
No 294
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=40.11 E-value=1.3e+02 Score=29.11 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=19.5
Q ss_pred hhhccCCCc----chhHHHHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHH
Q 013910 78 FMEFVPPSN----RGKWMVVFSTFWTFGSVSEAALAWIVMP-ILTWRWLLA 123 (434)
Q Consensus 78 ~~E~~p~~~----Rg~~~~~~~~~~~~G~~l~~~l~~~~~~-~~~Wr~~f~ 123 (434)
+.|..-.+. -|...|.+. +.+.+.-|.+-|.-.- ..+|+....
T Consensus 259 ~~E~~L~~Yv~v~~G~~~G~li---a~~~l~~p~~~Y~~~f~~~~~~~~i~ 306 (374)
T PF01528_consen 259 VIEVVLARYVKVQFGPHLGTLI---ACGILGLPAIRYENRFVAANLHTGIA 306 (374)
T ss_pred HHHHHHHHHhhccccchHHHHH---HHHHHHHHHHHHHHHhccccHHHHHH
Confidence 457754443 344443333 3333444444444322 456766444
No 295
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=36.85 E-value=3.3e+02 Score=24.85 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=19.7
Q ss_pred hhhhhHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 013910 280 FAELPGLLTAALLVDRVGRKLSMTIMFIFVCI 311 (434)
Q Consensus 280 ~~~~~g~~~~~~l~dr~gRR~~~~~~~~~~~~ 311 (434)
++...+.+.+-+++.|+.-|++.+++.++..+
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecchhHHH
Confidence 44445555666788888888766655444433
No 296
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=34.44 E-value=5e+02 Score=26.25 Aligned_cols=36 Identities=6% Similarity=0.003 Sum_probs=30.3
Q ss_pred hhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 013910 79 MEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMP 114 (434)
Q Consensus 79 ~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~~~ 114 (434)
.|.+..++-.+..++++.+.+++.++++.+..++..
T Consensus 174 Neitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 174 NEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 577777888999999999999999999888777643
No 297
>COG4708 Predicted membrane protein [Function unknown]
Probab=32.57 E-value=68 Score=26.07 Aligned_cols=29 Identities=28% Similarity=0.652 Sum_probs=24.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhchhH
Q 013910 272 YINVFITSFAELPGLLTAALLVDRVGRKL 300 (434)
Q Consensus 272 ~~~~~~~~~~~~~g~~~~~~l~dr~gRR~ 300 (434)
..+-+..+++++....+++.++||+++|.
T Consensus 137 lltw~tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 137 LLTWFTTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhhh
Confidence 34456667889999999999999999995
No 298
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=30.20 E-value=1.7e+02 Score=19.62 Aligned_cols=44 Identities=11% Similarity=0.142 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhcCCCh
Q 013910 100 FGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESP 143 (434)
Q Consensus 100 ~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~~~~~~~lpESp 143 (434)
+|.+++...+.......+.+...++..+.+++.......+|.+|
T Consensus 13 l~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34444443333333456788888888888877766666666554
No 299
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=29.57 E-value=1.3e+02 Score=29.97 Aligned_cols=37 Identities=8% Similarity=0.006 Sum_probs=26.7
Q ss_pred hhhhhhhhhcccccCCCchhh-HHhHHHHhhhHhHhhH
Q 013910 338 GTFIIANIFAPEIYPTSMRST-GAGVAYAVGRIGGMVC 374 (434)
Q Consensus 338 ~~~~~~~~~~~El~P~~~R~~-a~gi~~~~~~ig~~~~ 374 (434)
......-.+.+++.....|.+ |++....+..+|+.++
T Consensus 158 ~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLG 195 (498)
T KOG0637|consen 158 TLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLG 195 (498)
T ss_pred hhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceee
Confidence 344566778888888877777 8777777776766654
No 300
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.60 E-value=2.1e+02 Score=26.03 Aligned_cols=70 Identities=11% Similarity=0.119 Sum_probs=34.9
Q ss_pred hhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHH----hhhcchhhHHH-HHH-HHHHHHHHHHHhccccc
Q 013910 343 ANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGL----VTSCHQTAAIL-LLE-ALIVLSVVVILLIPFET 412 (434)
Q Consensus 343 ~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l----~~~~g~~~~~~-~~~-~~~~i~~~~~~~~~~et 412 (434)
.|+..+-..-+-+|..++|+...+-...+.+.....+.+ .+......+.+ ..+ ++.+++..+..+..+|.
T Consensus 64 lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 64 LWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 345555555566777777777666555555555544432 11111112222 233 33445555555666665
No 301
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=23.52 E-value=3.1e+02 Score=20.21 Aligned_cols=41 Identities=17% Similarity=-0.015 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 013910 92 VVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVL 132 (434)
Q Consensus 92 ~~~~~~~~~G~~l~~~l~~~~~~~~~Wr~~f~~~~i~~~l~ 132 (434)
++......+|.++|++.+.........|..+....+.+.+.
T Consensus 30 g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 30 GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 45556667777777776665544445555555554444443
No 302
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=22.69 E-value=8.2e+02 Score=24.83 Aligned_cols=41 Identities=17% Similarity=-0.068 Sum_probs=35.1
Q ss_pred hhhhhcccccCCCchhhHHhHHHHhhhHhHhhHHHHHHHHh
Q 013910 342 IANIFAPEIYPTSMRSTGAGVAYAVGRIGGMVCPLVAVGLV 382 (434)
Q Consensus 342 ~~~~~~~El~P~~~R~~a~gi~~~~~~ig~~~~p~~~~~l~ 382 (434)
+.|..++|+...+.-.+-.++.+..++++..++..+..++.
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67889999999999999999999999998888877766554
No 303
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=21.35 E-value=1.5e+02 Score=29.54 Aligned_cols=61 Identities=21% Similarity=0.185 Sum_probs=46.2
Q ss_pred ccHHHHHHHHHHHHhcCCCch-hhhhhhhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013910 52 PNYISLLILRGLAGAGLGSGH-VFFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIV 112 (434)
Q Consensus 52 ~~~~~l~~~R~l~Gig~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~l~~~l~~~~ 112 (434)
++-...++.-++.|+..|-.. ....+--+..++++|..+..+...+..+|...|+.+++.+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355567777889999887643 3333445778889999999999999999999988876554
No 304
>PHA03242 envelope glycoprotein M; Provisional
Probab=21.26 E-value=6.7e+02 Score=24.80 Aligned_cols=9 Identities=22% Similarity=0.002 Sum_probs=4.8
Q ss_pred hhhccCCCc
Q 013910 78 FMEFVPPSN 86 (434)
Q Consensus 78 ~~E~~p~~~ 86 (434)
+.|..-.+.
T Consensus 273 v~E~vL~~Y 281 (428)
T PHA03242 273 VVEGVLSHY 281 (428)
T ss_pred HHHHHHHHh
Confidence 457754443
No 305
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=20.45 E-value=4.3e+02 Score=23.55 Aligned_cols=49 Identities=16% Similarity=0.229 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHHHHH-HHHH-hcCCChhHHhhcCChHHHHHHHHHHHHH
Q 013910 117 TWRWLLALSAIPAFVLL-IFIV-FMPESPRYLCTKGRITDAHNILDKIAQF 165 (434)
Q Consensus 117 ~Wr~~f~~~~i~~~l~~-~~~~-~lpESp~~l~~~~~~~~a~~~l~~~~~~ 165 (434)
++.|.+.+.+++..++. .+.+ .--|...|-...|+...|...|+.+++.
T Consensus 50 ~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~~ 100 (224)
T PF13829_consen 50 GSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRRG 100 (224)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcCC
Confidence 45566666666544433 2222 2457777777789999999999888763
Done!