Your job contains 1 sequence.
>013912
MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV
KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW
AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY
VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG
PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF
KQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGK
PFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQ
EIVNECLHSSTIGK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013912
(434 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 971 2.0e-132 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 223 6.0e-19 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 203 3.5e-18 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 202 6.6e-18 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 202 6.7e-18 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 204 7.4e-18 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 204 7.7e-18 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 202 9.4e-18 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 202 1.2e-17 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 202 1.2e-17 2
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 243 2.6e-17 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 233 1.1e-16 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 226 1.9e-16 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 226 1.9e-16 2
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 227 4.0e-16 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 219 6.2e-16 2
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 204 8.9e-16 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 169 6.8e-15 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 160 2.1e-14 2
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 184 2.2e-14 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 216 2.9e-14 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 168 3.0e-14 2
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 216 3.1e-14 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 219 4.2e-14 2
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 169 4.7e-14 2
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 213 7.0e-14 2
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 209 9.6e-14 1
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 214 1.2e-13 1
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 214 1.2e-13 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 198 1.5e-13 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 210 1.5e-13 2
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 208 2.0e-13 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 220 2.1e-13 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 207 2.3e-13 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 220 2.6e-13 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 220 2.6e-13 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 221 2.6e-13 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 169 2.7e-13 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 201 2.9e-13 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 207 3.1e-13 1
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 200 3.4e-13 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 209 4.0e-13 2
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 209 4.0e-13 2
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 207 4.2e-13 2
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 177 4.5e-13 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 209 6.9e-13 2
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 162 8.1e-13 2
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 170 1.4e-12 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 163 1.5e-12 2
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 194 2.4e-12 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 162 2.4e-12 2
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 159 3.1e-12 2
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 158 3.1e-12 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 193 3.6e-12 1
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 190 4.7e-12 1
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 191 5.3e-12 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 195 5.8e-12 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 187 9.1e-12 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 187 9.1e-12 1
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 187 1.0e-11 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 192 1.3e-11 1
TAIR|locus:2035423 - symbol:AT1G19880 species:3702 "Arabi... 188 1.3e-11 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 142 1.6e-11 3
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 159 2.0e-11 3
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 188 2.1e-11 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 190 2.3e-11 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 173 3.0e-11 3
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 127 4.0e-11 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 187 4.7e-11 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 193 5.2e-11 1
SGD|S000003065 - symbol:SRM1 "Nucleotide exchange factor ... 161 6.2e-11 2
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 183 7.4e-11 1
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 182 9.7e-11 1
UNIPROTKB|P23800 - symbol:RCC1 "Regulator of chromosome c... 178 1.0e-10 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 187 1.1e-10 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 169 1.2e-10 2
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 181 1.2e-10 1
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 173 3.8e-10 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 178 4.6e-10 1
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 177 5.1e-10 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 172 5.5e-10 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 177 6.3e-10 1
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 171 6.4e-10 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 172 7.5e-10 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 172 7.6e-10 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 176 7.7e-10 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 183 9.4e-10 2
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 172 1.2e-09 1
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 125 1.3e-09 2
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 176 1.4e-09 2
DICTYBASE|DDB_G0278255 - symbol:DDB_G0278255 "regulator o... 168 2.1e-09 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 168 2.2e-09 1
POMBASE|SPBC557.03c - symbol:pim1 "Ran GDP/GTP exchange f... 168 2.2e-09 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 169 2.6e-09 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 167 2.8e-09 1
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 119 2.9e-09 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 119 2.9e-09 2
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 172 3.0e-09 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 170 3.4e-09 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 170 3.4e-09 1
WARNING: Descriptions of 84 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 971 (346.9 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 188/319 (58%), Positives = 227/319 (71%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++C+VKAG MMSLAIDN G LWMWGN P DS + S S P P+ DFHG TV+KV
Sbjct: 143 KVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKV 202
Query: 63 ACGSEHVVALVSAGETYKGE--DL-VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
ACG EHVVALV G+ +K D+ V YSWG N++GQLGLGD ESR RP+ +ETFNQ S
Sbjct: 203 ACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSG 262
Query: 120 WAVYEVTCGSFHTALLTHRKR-PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
VY++ CG+ HTALLT+RK P S+CWTFG GENGQLGH + +S+ +PE V +LP
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKG--PSICWTFGFGENGQLGHRSNKSSSLPEPVSDLP 320
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
++ YLVSVDCGLFHTSVVSS G VWSWGME+GLGLCP+ + T EAGD P ISG
Sbjct: 321 EHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSS 380
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 298
+F+DPVQV+CGAAHTVLV D GYKLWSWGRGR+GVLGTG D + P +V WP +
Sbjct: 381 ---RFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWPNELK 437
Query: 299 EFKQDELNTG--GLDDEIK 315
K++ + G +EIK
Sbjct: 438 PEKEEVPDDGKSASTEEIK 456
Score = 348 (127.6 bits), Expect = 2.0e-132, Sum P(2) = 2.0e-132
Identities = 68/111 (61%), Positives = 88/111 (79%)
Query: 320 EGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFD 379
E E D+ S++ EE+K L+SKL VMERYASILHGSIFGKPF E+DIP SL+ G+FD
Sbjct: 439 EKEEVPDDGKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYSLRVSGYFD 498
Query: 380 ITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSS 430
+ KEW MLESAD+S+L+RL+ FY +M+ VKDK+++RRIQEI+ +CL SS
Sbjct: 499 MGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQSS 549
Score = 146 (56.5 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 83/306 (27%), Positives = 122/306 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK 61
+I V AG SLA+ + G++W WG + + GF +S P + + F T
Sbjct: 74 RIVGVAAGAYHSLAVSDDGSVWCWGY----NIYGQLGFDGENSLAPCLIKNLFERETSSS 129
Query: 62 VA------CGSEHVVALVSAGETYK-GEDLV--CYSWGANNNGQLGLGD-RESRLRPKII 111
GS+ V V AG D V + WG N Q D R S I
Sbjct: 130 SLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIP 188
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLT-----HRKRPNDMLESMCWTFGLGENGQLGHGTTQ 166
V +V CG H L H+ D+ S+ +++G +GQLG G +
Sbjct: 189 FPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDV--SVLYSWGNNHHGQLGLGDGE 246
Query: 167 SALVPEQVKELPQYVYLVSVD--CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN-E 223
S P+ V+ Q L D CG HT++++ + KG +C N +
Sbjct: 247 SRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKET-----PKGPSICWTFGFGENGQ 301
Query: 224 AGDAISPILISGNGPHG----PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
G + S + P P+ V V CG HT +V+ +GY +WSWG R LG
Sbjct: 302 LGHRSNK---SSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGY-VWSWGMERG--LGL 355
Query: 280 GKTIDF 285
++F
Sbjct: 356 CPDVNF 361
Score = 135 (52.6 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 62/248 (25%), Positives = 98/248 (39%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ-- 116
++ +A G H +AL G+ V YSWG G+LG G L P ++E NQ
Sbjct: 18 IISLAAGEAHTIALT-------GDGCV-YSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL-------GENG-------QLGH 162
+ V G++H+ ++ D CW + + GEN L
Sbjct: 70 GDRIRIVGVAAGAYHSLAVS------DDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFE 123
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
T S+ + + +E+ + + +V G + + + G +W WG P+ L+
Sbjct: 124 RETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFT 183
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------DDGYK---LWSWGRG 272
PIL HG + ++VACG H V + D+ Y L+SWG
Sbjct: 184 SIPIPF-PILDF----HG---RTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNN 235
Query: 273 RSGVLGTG 280
G LG G
Sbjct: 236 HHGQLGLG 243
Score = 118 (46.6 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 298
+ +A G AHT+ +T DG ++SWGRG G LGTGK D P +V +P E
Sbjct: 19 ISLAAGEAHTIALTGDGC-VYSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
Score = 101 (40.6 bits), Expect = 6.2e-40, Sum P(2) = 6.2e-40
Identities = 44/167 (26%), Positives = 66/167 (39%)
Query: 115 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
++D + + G HT LT + +++G G G+LG G LVP V
Sbjct: 11 SEDLSRKIISLAAGEAHTIALTG--------DGCVYSWGRGMFGRLGTGKESDELVPVLV 62
Query: 175 KELPQY-----VYLVSVDCGLFHTSVVSSAGDVWSWGME-KG-LGLCPNASLT----RNE 223
E P + +V V G +H+ VS G VW WG G LG SL +N
Sbjct: 63 -EFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNL 121
Query: 224 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
S ++ +G V G+ ++ + + G LW WG
Sbjct: 122 FERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVG-GLWMWG 167
Score = 78 (32.5 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSST-EGGFSLVSSFTPSPVWDFHGHTV-- 59
+I S+ AG ++A+ G ++ WG T + LV P G +
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPN-QAEGDRIRI 75
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDS 118
V VA G+ H +A+ G + C WG N GQLG D E+ L P +I+ F +++
Sbjct: 76 VGVAAGAYHSLAVSDDGSVW------C--WGYNIYGQLGF-DGENSLAPCLIKNLFERET 126
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 223 (83.6 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 70/208 (33%), Positives = 95/208 (45%)
Query: 3 QICSVKAGGMMSLAIDNAGA-LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
QI SV G ++A +G ++ WG D G + FTP P+ HG + +
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWG---WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQ 124
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
+ACG H +A+ GE SWG N NGQLGLGD E L P+ I+ F
Sbjct: 125 IACGDSHCLAVTMEGEVQ--------SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--- 173
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
+ V G+ HTA +T D+ W G G G LG G LVPE+V
Sbjct: 174 IKMVAAGAEHTAAVTE---DGDLYG---W--GWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+ V CG HT VS +G ++++G K
Sbjct: 226 -MSMVACGWRHTISVSYSGALYTYGWSK 252
Score = 198 (74.8 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 61/172 (35%), Positives = 89/172 (51%)
Query: 119 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
P V ++ G+ H+ ALL+ D++ S W G GE+GQLGHG + P Q+ L
Sbjct: 14 PRKVLIISAGASHSVALLS-----GDIVCS--W--GRGEDGQLGHGDAEDRPSPTQLSAL 64
Query: 178 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 236
+ +VSV CG HT S +G +V+SWG G L + D +P+ I
Sbjct: 65 DGH-QIVSVTCGADHTVAYSQSGMEVYSWGWGD-FG-----RLGHGNSSDLFTPLPIKAL 117
Query: 237 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
HG + + Q+ACG +H + VT +G ++ SWGR ++G LG G T D P
Sbjct: 118 --HGIRIK---QIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGDTEDSLVP 163
Score = 186 (70.5 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G + GQLGHG + L+P +++ L ++ + G HT ++S G ++ WG K
Sbjct: 246 YTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G + N D SP+ + P Q VQV+CG HT+ VT+ +++W
Sbjct: 305 -FG---QVGVGNNL--DQCSPVQV-----RFPDDQKVVQVSCGWRHTLAVTERN-NVFAW 352
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
GRG +G LG G+++D P I+
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374
Score = 171 (65.3 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G G+ G+LGHG + P +K L + + + CG H V+ G+V SWG +
Sbjct: 90 YSWGWGDFGRLGHGNSSDLFTPLPIKAL-HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
N L + D++ P I G + + VA GA HT VT+DG L+ W
Sbjct: 149 ------NGQLGLGDTEDSLVPQKIQAF--EGIRIK---MVAAGAEHTAAVTEDG-DLYGW 196
Query: 270 GRGRSGVLGTGKTIDFFAP 288
G GR G LG G D P
Sbjct: 197 GWGRYGNLGLGDRTDRLVP 215
Score = 162 (62.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 70/243 (28%), Positives = 101/243 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGAL--WMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 57
+I V AG + A+ G L W WG N L D + LV P V G
Sbjct: 173 RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDR----LV----PERVTSTGGE 224
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+ VACG H +++ +Y G L Y W + GQLG GD E L P +E +
Sbjct: 225 KMSMVACGWRHTISV-----SYSGA-LYTYGW--SKYGQLGHGDLEDHLIPHKLEALSNS 276
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
+ +++ G HT LT + + +G + GQ+G G P QV+
Sbjct: 277 F---ISQISGGWRHTMALTS--------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVR-F 324
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-N 236
P +V V CG HT V+ +V++WG L S+ RN I + + G +
Sbjct: 325 PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP-KIIEALSVDGAS 383
Query: 237 GPH 239
G H
Sbjct: 384 GQH 386
Score = 135 (52.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 169 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD-VWSWGMEKGLGLCPNASLTRNEAGDA 227
+ ++V P+ V ++S G H SV +GD V SWG +G + L +A D
Sbjct: 5 MAADEVTAPPRKVLIISA--GASH-SVALLSGDIVCSWG--RG----EDGQLGHGDAEDR 55
Query: 228 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 287
SP +S H V V CGA HTV + G +++SWG G G LG G + D F
Sbjct: 56 PSPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT 110
Query: 288 P 288
P
Sbjct: 111 P 111
Score = 129 (50.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 43/143 (30%), Positives = 64/143 (44%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G G G LG G LVPE+V + V CG HT VS +G ++++G K
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTISVSYSGALYTYGWSK-- 252
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 271
L + D + P + F Q++ G HT+ +T DG KL+ WG
Sbjct: 253 ----YGQLGHGDLEDHLIPHKLEALSN---SFIS--QISGGWRHTMALTSDG-KLYGWGW 302
Query: 272 GRSGVLGTGKTIDFFAPAIVLWP 294
+ G +G G +D +P V +P
Sbjct: 303 NKFGQVGVGNNLDQCSPVQVRFP 325
Score = 112 (44.5 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 35/154 (22%), Positives = 62/154 (40%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ + AG S+A+ + + WG + G +P+ + GH +V V
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGR---GEDGQLGHGDAEDRPSPTQLSALDGHQIVSV 72
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
CG++H VA +G + YSWG + G+LG G+ P I+ + +
Sbjct: 73 TCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR---I 122
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 156
++ CG H +T + GLG+
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD 156
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 203 (76.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 60/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 4046 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 4102
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V +V
Sbjct: 4103 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDV 4151
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4152 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4202
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4203 VKVECGSQFSVALTKSGAVYTWG 4225
Score = 200 (75.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3107
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3108 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3158
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3206
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3207 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 195 (73.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 45 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 103 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 169 (64.5 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 65/208 (31%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3145 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3201
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3202 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3250
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ AG V++WG + G N + T N P L
Sbjct: 3251 VVEGL-RGKKIVHVAVGALHCLAVTDAGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3303
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3304 VQGL--EGQKI---TRVACGSSHSVAWT 3326
Score = 166 (63.5 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 46/137 (33%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4060 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H V VACG+ A T+ +TDD
Sbjct: 4119 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDVACGSGDAQTLCLTDDD 4167
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4168 -TVWSWGDGDYGKLGRG 4183
Score = 156 (60.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 59/201 (29%), Positives = 79/201 (39%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 767
Query: 187 DCGLFHTSVVSSAGDVWSWGM 207
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGL 787
Score = 156 (60.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 575
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 262
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 576 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 624
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G ++WSWG G G LG G + P ++
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 152 (58.6 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 152 (58.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 203
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 261
SWG + G L R + +P LI K QD V+V CG+ ++ +T
Sbjct: 629 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTK 675
Query: 262 DGYKLWSWGRGRSGVLGTG 280
DG +++SWG+G + LG G
Sbjct: 676 DG-QVYSWGKGDNQRLGHG 693
Score = 148 (57.2 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4117
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG + D P +V
Sbjct: 4118 WGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 140 (54.3 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3108
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3109 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3157
Query: 126 TCGS 129
CGS
Sbjct: 3158 ACGS 3161
Score = 139 (54.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
KA G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 2948 KAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 3003
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 3004 SLFAVTVEGKVY-----AC---GEATNGRLGLGLSSGTVPIPRQITAL---SSYVVKKVA 3052
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 3053 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 3103
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 3104 DIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 138 (53.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4202 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4258
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 4259 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 4307
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 4308 RVACGSAHT 4316
Score = 136 (52.9 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4226
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4227 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4276
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 4277 GDNDEGQLGDGTTNAIQRPRLV 4298
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3231 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDAG-Q 3278
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3279 VYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 134 (52.2 bits), Expect = 0.00016, P = 0.00016
Identities = 55/226 (24%), Positives = 98/226 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3948 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 4005 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 4055
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4056 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4106
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 4107 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 4146
Score = 124 (48.7 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3158 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3208
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3209 CQIECGAQFSLALT 3222
Score = 115 (45.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 41/134 (30%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AGG S + AG L+ WG G P V GH VV V
Sbjct: 4095 EVVDVAAGGAHSACVTAAGDLYTWGKGRY---GRLGHSDSEDQLKPKLVEALQGHRVVDV 4151
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ + V
Sbjct: 4152 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 4202
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4203 VKVECGSQFSVALT 4216
Score = 112 (44.5 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 661
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 97 (39.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3315
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3316 ACGSSHSVA 3324
Score = 97 (39.2 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4279
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4280 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4317
Score = 94 (38.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4270
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4271 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4322
Score = 84 (34.6 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 716
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 717 AGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 81 (33.6 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3166 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3223 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3271
Query: 134 LLT 136
+T
Sbjct: 3272 AVT 3274
Score = 71 (30.1 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3990 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4046
Query: 305 LNTGG 309
+N+GG
Sbjct: 4047 VNSGG 4051
Score = 44 (20.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S +I F Q S W
Sbjct: 2657 YKWGSVTHQSVGIVKAFSANGKDVIVDFPQQSHW 2690
Score = 41 (19.5 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 17/75 (22%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D V+ P+ + +V +
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRVTKPEPAALPGLDTKHIVGI 767
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 768 ACGPAQSFAWSSCSE 782
Score = 40 (19.1 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 230 PILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 271
PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3836 PIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3878
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2966 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 202 (76.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 2817 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 2873
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V ++
Sbjct: 2874 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VIDI 2922
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 2923 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 2973
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 2974 VKVECGSQFSVALTKSGAVYTWG 2996
Score = 200 (75.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 1859 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 1915
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 1916 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 1966
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 2014
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2015 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Score = 166 (63.5 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 1953 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 2009
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 2010 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 2058
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 2059 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 2111
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 2112 VQGL--EGQKI---TRVACGSSHSVAWT 2134
Score = 164 (62.8 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 2831 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 2889
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 2890 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 2938
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 2939 -TVWSWGDGDYGKLGRG 2954
Score = 149 (57.5 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2072
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 2073 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2121
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 148 (57.2 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 2888
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG + D P +V
Sbjct: 2889 WGKGRYGRLGHSDSEDQLKPKLV 2911
Score = 140 (54.3 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 1860 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 1916
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 1917 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 1965
Query: 126 TCGS 129
CGS
Sbjct: 1966 ACGS 1969
Score = 138 (53.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 1980 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2038
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 2039 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 2086
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 2087 VYAWGDNDHGQQGNGTTTVNRKPTLV 2112
Score = 138 (53.6 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 2973 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 3029
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 3030 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 3078
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 3079 RVACGSAHT 3087
Score = 136 (52.9 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 2941 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 2997
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 2998 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 3047
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 3048 GDNDEGQLGDGTTNAIQRPRLV 3069
Score = 134 (52.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
K G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 1756 KTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 1811
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 1812 SLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPRQITAL---SSYVVKKVA 1860
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 1861 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 1911
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 1912 DIACGSSHSAALTSSGELYTWGLGEYGRLG 1941
Score = 134 (52.2 bits), Expect = 0.00012, P = 0.00012
Identities = 55/226 (24%), Positives = 98/226 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 2719 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2775
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 2776 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 2826
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 2827 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 2877
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 2878 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 2917
Score = 124 (48.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 1909 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 1965
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 1966 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 2016
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 2017 CQIECGAQFSLALT 2030
Score = 113 (44.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/134 (29%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AGG S + AG L+ WG G P V GH V+ +
Sbjct: 2866 EVVDVAAGGAHSACVTAAGDLYTWGKGRY---GRLGHSDSEDQLKPKLVEALQGHRVIDI 2922
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ + V
Sbjct: 2923 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 2973
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 2974 VKVECGSQFSVALT 2987
Score = 97 (39.2 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 2993 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 3050
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 3051 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 3088
Score = 94 (38.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 2067 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 2124 ACGSSHSVA 2132
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 2993 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 3041
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 3042 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 3093
Score = 81 (33.6 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 1974 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 2031 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 2079
Query: 134 LLT 136
+T
Sbjct: 2080 AVT 2082
Score = 71 (30.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 2761 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 2817
Query: 305 LNTGG 309
+N+GG
Sbjct: 2818 VNSGG 2822
Score = 47 (21.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +GL S II F Q S W
Sbjct: 1465 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 1498
Score = 43 (20.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 251
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 2577 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 2629
Query: 252 GAA-HTVLVTDDGYKLWSWGR 271
T+ + +K W+W R
Sbjct: 2630 DLELDTLPCCAETHK-WAWFR 2649
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 202 (76.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 2853 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 2909
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V ++
Sbjct: 2910 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VIDI 2958
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 2959 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 3009
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 3010 VKVECGSQFSVALTKSGAVYTWG 3032
Score = 200 (75.5 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 1859 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 1915
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 1916 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 1966
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 2014
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2015 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Score = 166 (63.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 1953 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 2009
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 2010 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 2058
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 2059 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 2111
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 2112 VQGL--EGQKI---TRVACGSSHSVAWT 2134
Score = 164 (62.8 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 2867 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 2925
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 2926 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 2974
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 2975 -TVWSWGDGDYGKLGRG 2990
Score = 149 (57.5 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2072
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 2073 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2121
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 148 (57.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 2924
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG + D P +V
Sbjct: 2925 WGKGRYGRLGHSDSEDQLKPKLV 2947
Score = 140 (54.3 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 1860 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 1916
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 1917 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 1965
Query: 126 TCGS 129
CGS
Sbjct: 1966 ACGS 1969
Score = 138 (53.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 1980 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2038
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 2039 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 2086
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 2087 VYAWGDNDHGQQGNGTTTVNRKPTLV 2112
Score = 138 (53.6 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 3009 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 3065
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 3066 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 3114
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 3115 RVACGSAHT 3123
Score = 136 (52.9 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 2977 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 3033
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 3034 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 3083
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 3084 GDNDEGQLGDGTTNAIQRPRLV 3105
Score = 134 (52.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
K G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 1756 KTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 1811
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 1812 SLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPRQITAL---SSYVVKKVA 1860
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 1861 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 1911
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 1912 DIACGSSHSAALTSSGELYTWGLGEYGRLG 1941
Score = 134 (52.2 bits), Expect = 0.00012, P = 0.00012
Identities = 55/226 (24%), Positives = 98/226 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 2755 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2811
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 2812 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 2862
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 2863 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 2913
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 2914 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 2953
Score = 124 (48.7 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 1909 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 1965
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 1966 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 2016
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 2017 CQIECGAQFSLALT 2030
Score = 113 (44.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 39/134 (29%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AGG S + AG L+ WG G P V GH V+ +
Sbjct: 2902 EVVDVAAGGAHSACVTAAGDLYTWGKGRY---GRLGHSDSEDQLKPKLVEALQGHRVIDI 2958
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ + V
Sbjct: 2959 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 3009
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 3010 VKVECGSQFSVALT 3023
Score = 97 (39.2 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 3029 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 3086
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 3087 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 3124
Score = 94 (38.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 2067 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 2124 ACGSSHSVA 2132
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 3029 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 3077
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 3078 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 3129
Score = 81 (33.6 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 1974 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 2031 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 2079
Query: 134 LLT 136
+T
Sbjct: 2080 AVT 2082
Score = 71 (30.1 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 2797 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 2853
Query: 305 LNTGG 309
+N+GG
Sbjct: 2854 VNSGG 2858
Score = 47 (21.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +GL S II F Q S W
Sbjct: 1465 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 1498
Score = 43 (20.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 251
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 2613 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 2665
Query: 252 GAA-HTVLVTDDGYKLWSWGR 271
T+ + +K W+W R
Sbjct: 2666 DLELDTLPCCAETHK-WAWFR 2685
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 204 (76.9 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 60/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 3966 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGTEVVDVAAG 4022
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V +V
Sbjct: 4023 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDV 4071
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4072 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4122
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4123 VKVECGSQFSVALTKSGAVYTWG 4145
Score = 200 (75.5 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 2971 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3027
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3028 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3078
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3079 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3126
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3127 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3172
Score = 195 (73.7 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 45 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 392 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 443
Query: 103 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 444 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 495
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 496 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 541
Score = 169 (64.5 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 65/208 (31%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3065 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3121
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3122 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3170
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ AG V++WG + G N + T N P L
Sbjct: 3171 VVEGL-RGKKIVHVAVGALHCLAVTDAGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3223
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3224 VQGL--EGQKI---TRVACGSSHSVAWT 3246
Score = 163 (62.4 bits), Expect = 7.4e-18, Sum P(2) = 7.4e-18
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + +V V G H++ V++AGD+++W
Sbjct: 3980 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHSACVTAAGDLYTW 4038
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H V VACG+ A T+ +TDD
Sbjct: 4039 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDVACGSGDAQTLCLTDDD 4087
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4088 -TVWSWGDGDYGKLGRG 4103
Score = 157 (60.3 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 60/201 (29%), Positives = 79/201 (39%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 523 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 579
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
VAL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 580 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 628
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 629 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 677
Query: 187 DCGLFHTSVVSSAGDVWSWGM 207
CG + SS + WS G+
Sbjct: 678 ACGPAQSFAWSSCSE-WSIGL 697
Score = 156 (60.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 428 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 485
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 262
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 486 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 534
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G ++WSWG G G LG G + P ++
Sbjct: 535 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 562
Score = 153 (58.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 203
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 480 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 538
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 261
SWG + G L R + +P LI K QD V+V CG+ +V +T
Sbjct: 539 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTK 585
Query: 262 DGYKLWSWGRGRSGVLGTG 280
DG +++SWG+G + LG G
Sbjct: 586 DG-QVYSWGKGDNQRLGHG 603
Score = 152 (58.6 bits), Expect = 7.4e-18, Sum P(2) = 7.4e-18
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3184
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 3185 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3233
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3234 RVACGSSHSVAWT 3246
Score = 148 (57.2 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 45/141 (31%), Positives = 69/141 (48%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGMEKG 210
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG +
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE- 3990
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
+ L P +I + + V VA G AH+ VT G L++WG
Sbjct: 3991 -----DGKLGHGNRSPCDRPRVIESL-----RGTEVVDVAAGGAHSACVTAAG-DLYTWG 4039
Query: 271 RGRSGVLGTGKTIDFFAPAIV 291
+GR G LG + D P +V
Sbjct: 4040 KGRYGRLGHSDSEDQLKPKLV 4060
Score = 140 (54.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 2972 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3028
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3029 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3077
Query: 126 TCGS 129
CGS
Sbjct: 3078 ACGS 3081
Score = 140 (54.3 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
KA G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 2868 KAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 2923
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 2924 SLFAVTVEGKVY-----AC---GEATNGRLGLGISSGTVPIPRQITAL---SSYVVKKVA 2972
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 2973 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 3023
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 3024 DIACGSSHSAALTSSGELYTWGLGEYGRLG 3053
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3092 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3150
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3151 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDAG-Q 3198
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3199 VYAWGDNDHGQQGNGTTTVNRKPTLV 3224
Score = 136 (52.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4122 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4178
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 4179 TGSLHCVCCSEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 4227
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 4228 RVACGSAHT 4236
Score = 135 (52.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D +SWG + G+LG G + P I++ + V +V CGS + LT
Sbjct: 4085 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGVVKVECGSQFSVALTK---- 4137
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+T+G G+ +LGHG+ P QV+ L Q ++++ G H S G+
Sbjct: 4138 ----SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCSEDGE 4192
Query: 202 VWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
V++WG + G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4193 VYTWG-DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4237
Score = 132 (51.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4090 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4146
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V ++DG ++++W
Sbjct: 4147 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCSEDG-EVYTW 4196
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 4197 GDNDEGQLGDGTTNAIQRPRLV 4218
Score = 132 (51.5 bits), Expect = 0.00027, P = 0.00027
Identities = 55/226 (24%), Positives = 97/226 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3868 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 3924
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 3925 ADGKLY------ATGYGAG--GRLGVGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 3975
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + +V V G H+
Sbjct: 3976 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHS 4026
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 4027 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 4066
Score = 124 (48.7 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3021 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3077
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3078 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3128
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3129 CQIECGAQFSLALT 3142
Score = 113 (44.8 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 520
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 521 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 571
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 572 KVRCGSQFSVALT 584
Score = 97 (39.2 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 3179 KIVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3235
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3236 ACGSSHSVA 3244
Score = 90 (36.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H + +
Sbjct: 4142 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCSE--------D 4190
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4191 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4242
Score = 83 (34.3 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 570 VVKVRCGSQFSVALTKDGQVYSWGK---GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 626
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 627 AGSTHCLALT--------EDSEVHSWGSNDQCQ 651
Score = 81 (33.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3086 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3142
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3143 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3191
Query: 134 LLT 136
+T
Sbjct: 3192 AVT 3194
Score = 72 (30.4 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3910 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGVGGTESVSTPTLL--ESIQHVFIKKVA 3966
Query: 305 LNTGG 309
+N+GG
Sbjct: 3967 VNSGG 3971
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 24/81 (29%), Positives = 36/81 (44%)
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 251
T +S +G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3726 TRALSFSGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3778
Query: 252 GAA-HTVLVTDDGYKLWSWGR 271
T+ + +K W+W R
Sbjct: 3779 DLELDTLPCCAETHK-WAWFR 3798
Score = 44 (20.5 bits), Expect = 9.1e-10, Sum P(3) = 9.1e-10
Identities = 18/75 (24%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D V+ PS + +V +
Sbjct: 621 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRVTKPEPSALPGLDTKHIVGI 677
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 678 ACGPAQSFAWSSCSE 692
Score = 43 (20.2 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S +I F Q S W
Sbjct: 2577 YKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHW 2610
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2886 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2935
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 204 (76.9 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 60/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 4056 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGTEVVDVAAG 4112
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V +V
Sbjct: 4113 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDV 4161
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4162 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4212
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4213 VKVECGSQFSVALTKSGAVYTWG 4235
Score = 200 (75.5 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3061 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3117
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3118 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3168
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3169 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3216
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3217 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3262
Score = 195 (73.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 45 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 103 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 169 (64.5 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 65/208 (31%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3155 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3211
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3212 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3260
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ AG V++WG + G N + T N P L
Sbjct: 3261 VVEGL-RGKKIVHVAVGALHCLAVTDAGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3313
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3314 VQGL--EGQKI---TRVACGSSHSVAWT 3336
Score = 163 (62.4 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + +V V G H++ V++AGD+++W
Sbjct: 4070 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHSACVTAAGDLYTW 4128
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H V VACG+ A T+ +TDD
Sbjct: 4129 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDVACGSGDAQTLCLTDDD 4177
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4178 -TVWSWGDGDYGKLGRG 4193
Score = 157 (60.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 60/201 (29%), Positives = 79/201 (39%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
VAL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 767
Query: 187 DCGLFHTSVVSSAGDVWSWGM 207
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGL 787
Score = 156 (60.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 575
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 262
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 576 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 624
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G ++WSWG G G LG G + P ++
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 153 (58.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 203
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 261
SWG + G L R + +P LI K QD V+V CG+ +V +T
Sbjct: 629 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTK 675
Query: 262 DGYKLWSWGRGRSGVLGTG 280
DG +++SWG+G + LG G
Sbjct: 676 DG-QVYSWGKGDNQRLGHG 693
Score = 152 (58.6 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3274
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 3275 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3323
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3324 RVACGSSHSVAWT 3336
Score = 148 (57.2 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 45/141 (31%), Positives = 69/141 (48%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGMEKG 210
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG +
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE- 4080
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
+ L P +I + + V VA G AH+ VT G L++WG
Sbjct: 4081 -----DGKLGHGNRSPCDRPRVIESL-----RGTEVVDVAAGGAHSACVTAAG-DLYTWG 4129
Query: 271 RGRSGVLGTGKTIDFFAPAIV 291
+GR G LG + D P +V
Sbjct: 4130 KGRYGRLGHSDSEDQLKPKLV 4150
Score = 140 (54.3 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3062 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3118
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3119 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3167
Query: 126 TCGS 129
CGS
Sbjct: 3168 ACGS 3171
Score = 140 (54.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
KA G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 2958 KAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 3013
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 3014 SLFAVTVEGKVY-----AC---GEATNGRLGLGISSGTVPIPRQITAL---SSYVVKKVA 3062
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 3063 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 3113
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 3114 DIACGSSHSAALTSSGELYTWGLGEYGRLG 3143
Score = 136 (52.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3182 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3240
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3241 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDAG-Q 3288
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3289 VYAWGDNDHGQQGNGTTTVNRKPTLV 3314
Score = 136 (52.9 bits), Expect = 0.00010, P = 0.00010
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4212 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4268
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 4269 TGSLHCVCCSEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 4317
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 4318 RVACGSAHT 4326
Score = 135 (52.6 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D +SWG + G+LG G + P I++ + V +V CGS + LT
Sbjct: 4175 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGVVKVECGSQFSVALTK---- 4227
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+T+G G+ +LGHG+ P QV+ L Q ++++ G H S G+
Sbjct: 4228 ----SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCSEDGE 4282
Query: 202 VWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
V++WG + G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4283 VYTWG-DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4327
Score = 132 (51.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4180 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4236
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V ++DG ++++W
Sbjct: 4237 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCSEDG-EVYTW 4286
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 4287 GDNDEGQLGDGTTNAIQRPRLV 4308
Score = 132 (51.5 bits), Expect = 0.00027, P = 0.00027
Identities = 55/226 (24%), Positives = 97/226 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3958 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4014
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 4015 ADGKLY------ATGYGAG--GRLGVGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 4065
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + +V V G H+
Sbjct: 4066 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHS 4116
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 4117 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 4156
Score = 124 (48.7 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3111 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3167
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3168 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3218
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3219 CQIECGAQFSLALT 3232
Score = 113 (44.8 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 661
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 662 KVRCGSQFSVALT 674
Score = 97 (39.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 3269 KIVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3325
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3326 ACGSSHSVA 3334
Score = 90 (36.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H + +
Sbjct: 4232 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCSE--------D 4280
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4281 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4332
Score = 83 (34.3 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGK---GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 716
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 717 AGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 81 (33.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3176 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3232
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3233 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3281
Query: 134 LLT 136
+T
Sbjct: 3282 AVT 3284
Score = 72 (30.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 4000 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGVGGTESVSTPTLL--ESIQHVFIKKVA 4056
Query: 305 LNTGG 309
+N+GG
Sbjct: 4057 VNSGG 4061
Score = 44 (20.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 24/81 (29%), Positives = 36/81 (44%)
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 251
T +S +G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3816 TRALSFSGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3868
Query: 252 GAA-HTVLVTDDGYKLWSWGR 271
T+ + +K W+W R
Sbjct: 3869 DLELDTLPCCAETHK-WAWFR 3888
Score = 44 (20.5 bits), Expect = 9.6e-10, Sum P(3) = 9.6e-10
Identities = 18/75 (24%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D V+ PS + +V +
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRVTKPEPSALPGLDTKHIVGI 767
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 768 ACGPAQSFAWSSCSE 782
Score = 43 (20.2 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S +I F Q S W
Sbjct: 2667 YKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHW 2700
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2976 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3025
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 202 (76.2 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 4043 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 4099
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V ++
Sbjct: 4100 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDI 4148
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4149 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4199
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4200 VKVECGSQFSVALTKSGAVYTWG 4222
Score = 200 (75.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3050 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3106
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3107 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3157
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3205
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 195 (73.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 45 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 103 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Score = 166 (63.5 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3144 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3200
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3201 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3249
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 3250 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3302
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3303 VQGL--EGQKI---TRVACGSSHSVAWT 3325
Score = 165 (63.1 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H V +ACG+ A T+ +TDD
Sbjct: 4116 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDIACGSGDAQTLCLTDDD 4164
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4165 -TVWSWGDGDYGKLGRG 4180
Score = 156 (60.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 59/201 (29%), Positives = 79/201 (39%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 187 DCGLFHTSVVSSAGDVWSWGM 207
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGL 786
Score = 156 (60.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 574
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 262
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 575 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 623
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G ++WSWG G G LG G + P ++
Sbjct: 624 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 152 (58.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 203
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 569 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 261
SWG + G L R + +P LI K QD V+V CG+ ++ +T
Sbjct: 628 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTK 674
Query: 262 DGYKLWSWGRGRSGVLGTG 280
DG +++SWG+G + LG G
Sbjct: 675 DG-QVYSWGKGDNQRLGHG 692
Score = 149 (57.5 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 148 (57.2 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4114
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG + D P +V
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 140 (54.3 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3051 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3107
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3108 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3156
Query: 126 TCGS 129
CGS
Sbjct: 3157 ACGS 3160
Score = 140 (54.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
KA G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 2947 KAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 3002
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 3003 SLFAVTVEGKVY-----AC---GEATNGRLGLGISSGTVPIPRQITAL---SSYVVKKVA 3051
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 3052 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 3102
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 3103 DIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 138 (53.6 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3230 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 3277
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3278 VYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 138 (53.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4199 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4255
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 4256 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 4304
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 4305 RVACGSAHT 4313
Score = 136 (52.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4223
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4224 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4273
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLV 4295
Score = 134 (52.2 bits), Expect = 0.00016, P = 0.00016
Identities = 55/226 (24%), Positives = 98/226 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 4002 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 4052
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 4104 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 4143
Score = 124 (48.7 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3100 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3156
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3157 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3207
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3208 CQIECGAQFSLALT 3221
Score = 114 (45.2 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 40/134 (29%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AGG S + AG L+ WG G P V GH VV +
Sbjct: 4092 EVVDVAAGGAHSACVTAAGDLYTWGKGRY---GRLGHSDSEDQLKPKLVEALQGHRVVDI 4148
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ + V
Sbjct: 4149 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 4199
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4200 VKVECGSQFSVALT 4213
Score = 112 (44.5 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 610 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 660
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 661 KVRCGSQFSIALT 673
Score = 97 (39.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4276
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4277 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4314
Score = 94 (38.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3314
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3315 ACGSSHSVA 3323
Score = 94 (38.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4267
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4268 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4319
Score = 84 (34.6 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 659 VVKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 715
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 716 AGSTHCLALT--------EDSEVHSWGSNDQCQ 740
Score = 81 (33.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3165 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3222 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3270
Query: 134 LLT 136
+T
Sbjct: 3271 AVT 3273
Score = 71 (30.1 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3987 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4043
Query: 305 LNTGG 309
+N+GG
Sbjct: 4044 VNSGG 4048
Score = 46 (21.3 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
+D A Y ++ G+ T T++KR D L + + + EN Q+G
Sbjct: 2530 EDVDDAAYSMSTGAVVTESQTYKKRA-DFLSNDDYAVYVRENIQVG 2574
Score = 44 (20.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S II F Q S W
Sbjct: 2656 YKWGSVTHQSVGVVKAFSANGKDIIVDFPQQSHW 2689
Score = 43 (20.2 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 251
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3803 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3855
Query: 252 GAA-HTVLVTDDGYKLWSWGR 271
T+ + +K W+W R
Sbjct: 3856 DLELDTLPCCAETHK-WAWFR 3875
Score = 41 (19.5 bits), Expect = 5.1e-09, Sum P(3) = 5.1e-09
Identities = 17/75 (22%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D V+ P+ + +V +
Sbjct: 710 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRVTKPEPAALPGLDTKHIVGI 766
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 767 ACGPAQSFAWSSCSE 781
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2965 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 202 (76.2 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 3988 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 4044
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V ++
Sbjct: 4045 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VIDI 4093
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4094 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4144
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4145 VKVECGSQFSVALTKSGAVYTWG 4167
Score = 200 (75.5 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 2994 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3050
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3051 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3101
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3102 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3149
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3150 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3195
Score = 194 (73.4 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 53/164 (32%), Positives = 80/164 (48%)
Query: 48 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTVPL 481
Query: 106 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 164
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 533
Query: 165 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 534 SEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 576
Score = 166 (63.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3088 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3144
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3145 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3193
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 3194 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3246
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3247 VQGL--EGQKI---TRVACGSSHSVAWT 3269
Score = 164 (62.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4002 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4060
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 4061 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 4109
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4110 -TVWSWGDGDYGKLGRG 4125
Score = 158 (60.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 60/211 (28%), Positives = 83/211 (39%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 558 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 614
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 615 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 663
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 664 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDTKHIVGI 712
Query: 187 DCGLFHTSVVSSAGDVWSWGMEKG--LGLCP 215
CG + SS + WS G+ + +CP
Sbjct: 713 ACGPAQSFAWSSCSE-WSIGLRVPFVVDICP 742
Score = 156 (60.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 463 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 520
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 262
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 521 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 569
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G ++WSWG G G LG G + P ++
Sbjct: 570 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 597
Score = 151 (58.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 203
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 515 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 573
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 261
SWG + G L R + +P LI K QD ++V CG+ ++ +T
Sbjct: 574 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTK 620
Query: 262 DGYKLWSWGRGRSGVLGTG 280
DG +++SWG+G + LG G
Sbjct: 621 DG-QVYSWGKGDNQRLGHG 638
Score = 149 (57.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3207
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3208 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3256
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3257 RVACGSSHSVAWT 3269
Score = 148 (57.2 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4059
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG + D P +V
Sbjct: 4060 WGKGRYGRLGHSDSEDQLKPKLV 4082
Score = 140 (54.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 2995 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3051
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3052 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3100
Query: 126 TCGS 129
CGS
Sbjct: 3101 ACGS 3104
Score = 138 (53.6 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3115 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3173
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3174 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 3221
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3222 VYAWGDNDHGQQGNGTTTVNRKPTLV 3247
Score = 138 (53.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4144 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4200
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 4201 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 4249
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 4250 RVACGSAHT 4258
Score = 136 (52.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4112 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4168
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4169 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4218
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 4219 GDNDEGQLGDGTTNAIQRPRLV 4240
Score = 134 (52.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
K G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 2891 KTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 2946
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 2947 SLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPRQITAL---SSYVVKKVA 2995
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 2996 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 3046
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 3047 DIACGSSHSAALTSSGELYTWGLGEYGRLG 3076
Score = 134 (52.2 bits), Expect = 0.00016, P = 0.00016
Identities = 55/226 (24%), Positives = 98/226 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3890 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 3947 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 3997
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3998 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4048
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 4049 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 4088
Score = 124 (48.7 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3044 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3100
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3101 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3151
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3152 CQIECGAQFSLALT 3165
Score = 113 (44.8 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 39/134 (29%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AGG S + AG L+ WG G P V GH V+ +
Sbjct: 4037 EVVDVAAGGAHSACVTAAGDLYTWGKGRY---GRLGHSDSEDQLKPKLVEALQGHRVIDI 4093
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ + V
Sbjct: 4094 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 4144
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4145 VKVECGSQFSVALT 4158
Score = 112 (44.5 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 556 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VI 606
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 607 KVRCGSQFSIALT 619
Score = 97 (39.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4221
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4222 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4259
Score = 94 (38.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3202 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3258
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3259 ACGSSHSVA 3267
Score = 94 (38.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4212
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4213 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4264
Score = 84 (34.6 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 605 VIKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 661
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 662 AGSTHCLALT--------EDSEVHSWGSNDQCQ 686
Score = 81 (33.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3109 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3166 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3214
Query: 134 LLT 136
+T
Sbjct: 3215 AVT 3217
Score = 71 (30.1 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3932 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 3988
Query: 305 LNTGG 309
+N+GG
Sbjct: 3989 VNSGG 3993
Score = 55 (24.4 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
VQVA G+ VT +G K++S G +G LG G
Sbjct: 2939 VQVAGGSKSLFAVTVEG-KVYSCGEATNGRLGLG 2971
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +GL S II F Q S W
Sbjct: 2600 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 2633
Score = 43 (20.2 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 251
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3748 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3800
Query: 252 GAA-HTVLVTDDGYKLWSWGR 271
T+ + +K W+W R
Sbjct: 3801 DLELDTLPCCAETHK-WAWFR 3820
Score = 41 (19.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
Identities = 17/75 (22%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D V+ P+ + +V +
Sbjct: 656 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRVTKPEPTALPGLDTKHIVGI 712
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 713 ACGPAQSFAWSSCSE 727
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2909 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 202 (76.2 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 59/203 (29%), Positives = 94/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV VA G
Sbjct: 4045 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 4101
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL Y+WG G+LG D E +L+PK++E V ++
Sbjct: 4102 GAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VIDI 4150
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4151 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4201
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4202 VKVECGSQFSVALTKSGAVYTWG 4224
Score = 200 (75.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 70 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3107
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 187
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3108 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3158
Query: 188 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 244
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3206
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3207 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 194 (73.4 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 53/164 (32%), Positives = 80/164 (48%)
Query: 48 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTVPL 536
Query: 106 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 164
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 588
Query: 165 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 589 SEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 166 (63.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3145 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3201
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3202 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3250
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 3251 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3303
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3304 VQGL--EGQKI---TRVACGSSHSVAWT 3326
Score = 164 (62.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 4118 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 4166
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4167 -TVWSWGDGDYGKLGRG 4182
Score = 156 (60.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 575
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 262
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 576 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 624
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G ++WSWG G G LG G + P ++
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 155 (59.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 58/201 (28%), Positives = 79/201 (39%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 767
Query: 187 DCGLFHTSVVSSAGDVWSWGM 207
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGL 787
Score = 151 (58.2 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 203
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 261
SWG + G L R + +P LI K QD ++V CG+ ++ +T
Sbjct: 629 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTK 675
Query: 262 DGYKLWSWGRGRSGVLGTG 280
DG +++SWG+G + LG G
Sbjct: 676 DG-QVYSWGKGDNQRLGHG 693
Score = 149 (57.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 148 (57.2 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4116
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG + D P +V
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 140 (54.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3108
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3109 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3157
Query: 126 TCGS 129
CGS
Sbjct: 3158 ACGS 3161
Score = 138 (53.6 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3231 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 3278
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3279 VYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 138 (53.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 40/129 (31%), Positives = 55/129 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4201 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4257
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ V
Sbjct: 4258 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VN 4306
Query: 124 EVTCGSFHT 132
V CGS HT
Sbjct: 4307 RVACGSAHT 4315
Score = 136 (52.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4225
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4226 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4275
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G LG G T P +V
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLV 4297
Score = 134 (52.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 57/210 (27%), Positives = 96/210 (45%)
Query: 8 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 67
K G+ S A +++WG L D GG PS VV+VA GS+
Sbjct: 2948 KTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 3003
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVT 126
+ A+ G+ Y C G NG+LGLG + P+ I S + V +V
Sbjct: 3004 SLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPRQITAL---SSYVVKKVA 3052
Query: 127 C--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H LT ++ +++G G++G+LGH + + P ++ L + +
Sbjct: 3053 VHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIR 3103
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 212
+ CG H++ ++S+G++++WG+ E G LG
Sbjct: 3104 DIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 134 (52.2 bits), Expect = 0.00016, P = 0.00016
Identities = 55/226 (24%), Positives = 98/226 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 4004 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 4054
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ V++AGD+++WG KG L +++ D + P L+ H
Sbjct: 4106 ACVTAAGDLYTWG--KGR----YGRLGHSDSEDQLKPKLVEALQGH 4145
Score = 124 (48.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3158 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3208
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3209 CQIECGAQFSLALT 3222
Score = 113 (44.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 39/134 (29%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AGG S + AG L+ WG G P V GH V+ +
Sbjct: 4094 EVVDVAAGGAHSACVTAAGDLYTWGKGRY---GRLGHSDSEDQLKPKLVEALQGHRVIDI 4150
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ + V
Sbjct: 4151 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 4201
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4202 VKVECGSQFSVALT 4215
Score = 112 (44.5 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VI 661
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 97 (39.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4278
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4279 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4316
Score = 94 (38.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3315
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3316 ACGSSHSVA 3324
Score = 94 (38.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4269
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4270 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4321
Score = 84 (34.6 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 660 VIKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 716
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 717 AGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 81 (33.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3166 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3223 KSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3271
Query: 134 LLT 136
+T
Sbjct: 3272 AVT 3274
Score = 71 (30.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3989 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4045
Query: 305 LNTGG 309
+N+GG
Sbjct: 4046 VNSGG 4050
Score = 55 (24.4 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
VQVA G+ VT +G K++S G +G LG G
Sbjct: 2996 VQVAGGSKSLFAVTVEG-KVYSCGEATNGRLGLG 3028
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +GL S II F Q S W
Sbjct: 2657 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 2690
Score = 43 (20.2 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 17/75 (22%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D V+ P+ + +V +
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRVTKPEPTALPGLDSKHIVGI 767
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 768 ACGPAQSFAWSSCSE 782
Score = 40 (19.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 230 PILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 271
PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3835 PIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3877
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2966 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 243 (90.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 77/221 (34%), Positives = 104/221 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I + G SLA+ G L+ WG L D G S+ TP V + G +V+++
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQ-NL-DGQLGVGRIFASTSTPEIVENLSGVPLVQIS 207
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G H +AL +G Y SWG N+ GQLGLG ++ P IE + V
Sbjct: 208 AGEAHSMALSMSGNVY--------SWGRNDCGQLGLGHTYNKESPSCIEALDDQK---VE 256
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+ CG HTALLT + +TFG G+ GQLGH +TQ+ L P V L +
Sbjct: 257 FLACGGCHTALLTK--------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RV 307
Query: 184 VSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNE 223
+ CG HT + VS G V+S+G K G N TRN+
Sbjct: 308 TQIACGRQHTLAYVSDTGKVFSFGSGKE-GQLGNGG-TRNQ 346
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/171 (29%), Positives = 76/171 (44%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 180
+ ++TCG +H+ L+ E W G +GQLG G S PE V+ L
Sbjct: 150 IIQITCGDYHSLALSKGG------ELFAW--GQNLDGQLGVGRIFASTSTPEIVENLSG- 200
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
V LV + G H+ +S +G+V+SWG C L + SP I
Sbjct: 201 VPLVQISAGEAHSMALSMSGNVYSWGRND----CGQLGLGHTYNKE--SPSCIEALDDQK 254
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+F +ACG HT L+T G ++++G G+ G LG T + P +V
Sbjct: 255 VEF-----LACGGCHTALLTKSGL-VFTFGDGKYGQLGHNSTQNELRPRLV 299
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/140 (32%), Positives = 75/140 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+++G + GQLG G T + P ++ L Q V ++ CG HT++++ +G V+++G
Sbjct: 223 YSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA--CGGCHTALLTKSGLVFTFGDG 280
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
K L N+ T+NE + P L++G G + Q+ACG HT+ D K++S
Sbjct: 281 KYGQLGHNS--TQNE----LRPRLVTGLV--GNRV---TQIACGRQHTLAYVSDTGKVFS 329
Query: 269 WGRGRSGVLGTGKTIDFFAP 288
+G G+ G LG G T + P
Sbjct: 330 FGSGKEGQLGNGGTRNQLIP 349
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 233 (87.1 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 69/212 (32%), Positives = 101/212 (47%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
ED Y+WG N QLG G + P ++ T Q V EV+CGS H+ LTH
Sbjct: 92 EDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGK--RVTEVSCGSHHSLALTHEG-- 147
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
E W G GQ+G G+T + P +V Q +V++ CG + V+ G+
Sbjct: 148 ----EVFAW--GYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGE 201
Query: 202 VWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVT 260
V+ WG G N L G+ ++P LI+ G F +Q+A G AH++ +T
Sbjct: 202 VYGWGYN-G-----NGQLGLGNNGNQLTPCRLIALQG-----FC-VLQIASGYAHSLALT 249
Query: 261 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
D+G L++WG G LGTG + +P V+
Sbjct: 250 DEGL-LYAWGANTYGQLGTGNKSNQLSPVQVM 280
Score = 147 (56.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 45/156 (28%), Positives = 73/156 (46%)
Query: 61 KVA-CGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFN 115
KV+ C V+ ++ G+T ++ Y WG N NGQLGLG+ ++L P ++I
Sbjct: 173 KVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIAL-- 230
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 175
+ V ++ G H+ LT E + + +G GQLG G + L P QV
Sbjct: 231 --QGFCVLQIASGYAHSLALTD--------EGLLYAWGANTYGQLGTGNKSNQLSPVQVM 280
Query: 176 ELPQYVYLVSVDCGLFHTSVVSS-AGDVWSWGMEKG 210
+ + ++ C HTS + +G V+ WG +G
Sbjct: 281 TEKERIVEIAA-CHSTHTSAAKTQSGQVYMWGQCRG 315
Score = 125 (49.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 43/160 (26%), Positives = 71/160 (44%)
Query: 3 QICSVKAG-GMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 58
++ S+ G G L + G L+ WG+ L + +T G S + T + G
Sbjct: 75 KLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-----NLQGKR 129
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V +V+CGS H +AL T++GE ++WG NN GQ+G G ++ P+ + Q+
Sbjct: 130 VTEVSCGSHHSLAL-----THEGE---VFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNK 181
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 158
+ + CG + +T + GLG NG
Sbjct: 182 --VIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNG 219
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I ++ G S+A+ + G ++ WG + G + + TP + G V+++A
Sbjct: 183 IVNIACGQTSSMAVTDNGEVYGWG---YNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIA 239
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G H +AL G + Y+WGAN GQLG G++ ++L P + T + +
Sbjct: 240 SGYAHSLALTDEG--------LLYAWGANTYGQLGTGNKSNQLSPVQVMTEKE----RIV 287
Query: 124 EVT-CGSFHTA 133
E+ C S HT+
Sbjct: 288 EIAACHSTHTS 298
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 42/137 (30%), Positives = 61/137 (44%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-H 131
SA E Y D Y G N + LG GD +S + PK ++ + + ++ GS H
Sbjct: 30 SANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKK---LISLSYGSGPH 86
Query: 132 TALLTHRKRPNDMLESMCWTFGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
L+T E W G NG QLG+GTT + P V Q + V CG
Sbjct: 87 VLLVTEDG------ELYAW----GHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCG 136
Query: 190 LFHTSVVSSAGDVWSWG 206
H+ ++ G+V++WG
Sbjct: 137 SHHSLALTHEGEVFAWG 153
Score = 88 (36.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 44/189 (23%), Positives = 78/189 (41%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G NGQLG G + L P ++ L + L + G H+ ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVL-QIASGYAHSLALTDEGLLYAWGANT-- 261
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 270
L + +SP+ + + + V++A C + HT +++ WG
Sbjct: 262 ----YGQLGTGNKSNQLSPVQVM------TEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Query: 271 --RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 321
RG++ VL T FA V+W L+ E D+ T + +K K+ +
Sbjct: 312 QCRGQAIVLPHLTHFASTDDVFACFATPSVMWRMLSME--HDDFLT--VAQSLK-KEFDN 366
Query: 322 AEERDEKLS 330
E D + S
Sbjct: 367 PETSDLEFS 375
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 226 (84.6 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 73/240 (30%), Positives = 115/240 (47%)
Query: 48 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDTVPL 536
Query: 106 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 164
PK+I + + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 588
Query: 165 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
++ +P V L + + ++ V CG T V+ G VWSWG + G L R
Sbjct: 589 SEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KLGRG 641
Query: 223 EAGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ +P LI K QD V+V CG+ ++ +T DG ++++WG+G + LG G
Sbjct: 642 GSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRLGHG 693
Score = 209 (78.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/203 (28%), Positives = 96/203 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV +A G
Sbjct: 4048 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAG 4104
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL ++WG G+LG GD E +L+PK++E + V ++
Sbjct: 4105 GAHSACITAAG------DL--FTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YRVIDI 4153
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4154 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTD-LGV 4204
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4205 VKVECGSQFSVALTKSGAVYTWG 4227
Score = 196 (74.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+SWG ++G+LG R + +P++IE + ++ CGS H+A +T
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAAITS--------S 3121
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWS 204
+T+GLGE G+LGHG + L P+ VK L + ++ V CG T ++ G V+S
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDG 263
WG + G L R + P I NG Q Q+ CGA ++ +T G
Sbjct: 3181 WG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------QGVCQIECGAQFSLALTKSG 3228
Query: 264 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+W+WG+G LG G + P +V
Sbjct: 3229 V-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 170 (64.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 72/257 (28%), Positives = 121/257 (47%)
Query: 31 LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 90
L D GG PS VV+VA GS+ + A+ G+ Y C G
Sbjct: 2970 LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---G 3021
Query: 91 ANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLES 147
NG+LGLG + P+ I S + V +V G H LT ++
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQITAL---SNYVVKKVAVHSGGRHAMALT--------VDG 3070
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+++G G++G+LGH + + P ++ L + + + CG H++ ++S+G++++WG+
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYTWGL 3129
Query: 208 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
E G LG N + + + + +L+ G + +QVACG+ A T+ +TD+G
Sbjct: 3130 GEYGRLGHGDNTTQLKPK----MVKVLL------GHRV---IQVACGSRDAQTLALTDEG 3176
Query: 264 YKLWSWGRGRSGVLGTG 280
++SWG G G LG G
Sbjct: 3177 L-VFSWGDGDFGKLGRG 3192
Score = 169 (64.5 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3148 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3204
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHGT P+
Sbjct: 3205 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQ 3253
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ G V++WG + G N + T N P L
Sbjct: 3254 VVEGL-RGKKIVHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3306
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3307 VQGL--EGQKI---TRVACGSSHSVAWT 3329
Score = 157 (60.3 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V + G H++ +++AGD+++W
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L ++ D + P L+ G + D +ACG+ A T+ +TDD
Sbjct: 4121 G--KGR----YGRLGHGDSEDQLKPKLVEAL--QGYRVID---IACGSGDAQTLCLTDDD 4169
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4170 -TVWSWGDGDYGKLGRG 4185
Score = 155 (59.6 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 206
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 264
+G L + D P+L++G G K D V+CG+ A T+ VT++G
Sbjct: 578 --RG----NYGRLGHGSSEDQTIPMLVTGL--KGLKVID---VSCGSGDAQTLAVTENG- 625
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 151 (58.2 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 47/143 (32%), Positives = 73/143 (51%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V +A G AH+ +T G L++
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAAGGAHSACITAAG-DLFT 4119
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG G + D P +V
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLV 4142
Score = 145 (56.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 142 (55.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG ++A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3055 AVHSGGRHAMALTVDGKIFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3111
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3112 SSHSAAITSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3160
Query: 126 TCGS 129
CGS
Sbjct: 3161 ACGS 3164
Score = 139 (54.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 42/139 (30%), Positives = 59/139 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4260
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V G GE Y+WG N+ GQLG G + RP+++ +
Sbjct: 4261 TGSLHCVCCTEDG---LGE---VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---IN 4311
Query: 124 EVTCGSFHTALLTHRKRPN 142
V CGS HT + K N
Sbjct: 4312 RVACGSAHTLAWSTSKPAN 4330
Score = 137 (53.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTD-LGVVKVECGSQFSVALTKSGAVYTWG--K 4228
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY-KLWS 268
G L P + G G K + +A G+ H V T+DG ++++
Sbjct: 4229 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDGLGEVYT 4279
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG G LG G T P +V
Sbjct: 4280 WGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 136 (52.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3233
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3234 G--KG----DYFRLGHGTDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDTG-Q 3281
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3282 VYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 129 (50.5 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 39/131 (29%), Positives = 55/131 (41%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
S +G +LA+ G +W WG+ D G TP + +VKV CG
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCG 666
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S+ +AL G+ Y +WG +N +LG G E PK++E V +V
Sbjct: 667 SQFSIALTKDGQVY--------TWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK---VIDV 715
Query: 126 TCGSFHTALLT 136
GS H LT
Sbjct: 716 AAGSTHCLALT 726
Score = 129 (50.5 bits), Expect = 0.00057, P = 0.00057
Identities = 52/220 (23%), Positives = 96/220 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 4007 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 4057
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 4058 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 4108
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 233
+ +++AGD+++WG KG L ++ D + P L+
Sbjct: 4109 ACITAAGDLFTWG--KGR----YGRLGHGDSEDQLKPKLV 4142
Score = 126 (49.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S AI ++G L+ WG L + G + P V GH V++V
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3160
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3161 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3211
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3212 CQIECGAQFSLALT 3225
Score = 109 (43.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 40/133 (30%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD +
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--IV 661
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 107 (42.7 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 87 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
+ WG N+ QLG G + S+++ P ET S V +V GS +T +
Sbjct: 2966 FVWGLNDKDQLG-GLKGSKIKVPSFSETL---SALNVVQVAGGSKSLFAVT--------V 3013
Query: 146 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVW 203
E + G NG+LG G + + +P Q+ L YV V+V G H ++ G ++
Sbjct: 3014 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIF 3073
Query: 204 SWG 206
SWG
Sbjct: 3074 SWG 3076
Score = 106 (42.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 38/134 (28%), Positives = 54/134 (40%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ + AGG S I AG L+ WG G P V G+ V+ +
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRY---GRLGHGDSEDQLKPKLVEALQGYRVIDI 4153
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ V
Sbjct: 4154 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSLTD---LGV 4204
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4205 VKVECGSQFSVALT 4218
Score = 99 (39.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T D L
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE-----DGLG 4275
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+ +T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4276 EV-YTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHTLAWSTS 4326
Score = 93 (37.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3319 ACGSSHSVA 3327
Score = 88 (36.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS--AGDVWSWGM 207
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGLGEVYTWG- 4281
Query: 208 EKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
+ G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4282 DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKIN---RVACGSAHTL 4321
Score = 84 (34.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 27/93 (29%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGK---GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 717 AGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 80 (33.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3169 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3226 KSG--------VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3274
Query: 134 LLT 136
+T
Sbjct: 3275 AVT 3277
Score = 75 (31.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 39/149 (26%), Positives = 63/149 (42%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+ + + +GL + QLG G S + E + +V V G V+ G V++
Sbjct: 2961 IRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 205 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
G G LGL ++ +G P I+ + K V V G H + +T D
Sbjct: 3020 CGEATNGRLGL----GIS---SGTVPIPRQITALSNYVVK---KVAVHSGGRHAMALTVD 3069
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G K++SWG G G LG ++ P ++
Sbjct: 3070 G-KIFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Score = 71 (30.1 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3992 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4048
Query: 305 LNTGG 309
+N+GG
Sbjct: 4049 VNSGG 4053
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S +I F Q S W
Sbjct: 2660 YKWGSVTHRSVGVVKAFSANGKDVIVDFPQQSHW 2693
Score = 41 (19.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 226 DAISPILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 271
D PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3834 DYEDPIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3880
Score = 40 (19.1 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 16/75 (21%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D ++ P+ + +V +
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRITKPEPAALPGLDTKHIVGI 767
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 768 ACGPAQSFAWSSCSE 782
Score = 39 (18.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2969 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Score = 38 (18.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 276 VLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 322
+LG + D A+ EE D+ NTG L + K LE A
Sbjct: 2913 ILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRK-KAAGLESA 2958
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 59 VVKVACGSEHVVALVSAGETY 79
VV++AC + + L G Y
Sbjct: 454 VVQIACAEKRFLILSRNGRVY 474
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 226 (84.6 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 73/240 (30%), Positives = 115/240 (47%)
Query: 48 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDTVPL 536
Query: 106 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 164
PK+I + + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 588
Query: 165 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
++ +P V L + + ++ V CG T V+ G VWSWG + G L R
Sbjct: 589 SEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KLGRG 641
Query: 223 EAGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ +P LI K QD V+V CG+ ++ +T DG ++++WG+G + LG G
Sbjct: 642 GSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRLGHG 693
Score = 209 (78.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 58/203 (28%), Positives = 96/203 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG D G + P + G VV +A G
Sbjct: 4048 AVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVDIAAG 4104
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG DL ++WG G+LG GD E +L+PK++E + V ++
Sbjct: 4105 GAHSACITAAG------DL--FTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YRVIDI 4153
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4154 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTD-LGV 4204
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4205 VKVECGSQFSVALTKSGAVYTWG 4227
Score = 196 (74.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+SWG ++G+LG R + +P++IE + ++ CGS H+A +T
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAAITS--------S 3121
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWS 204
+T+GLGE G+LGHG + L P+ VK L + ++ V CG T ++ G V+S
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDG 263
WG + G L R + P I NG Q Q+ CGA ++ +T G
Sbjct: 3181 WG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------QGVCQIECGAQFSLALTKSG 3228
Query: 264 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+W+WG+G LG G + P +V
Sbjct: 3229 V-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 170 (64.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 72/257 (28%), Positives = 121/257 (47%)
Query: 31 LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 90
L D GG PS VV+VA GS+ + A+ G+ Y C G
Sbjct: 2970 LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---G 3021
Query: 91 ANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLES 147
NG+LGLG + P+ I S + V +V G H LT ++
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQITAL---SNYVVKKVAVHSGGRHAMALT--------VDG 3070
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+++G G++G+LGH + + P ++ L + + + CG H++ ++S+G++++WG+
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYTWGL 3129
Query: 208 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
E G LG N + + + + +L+ G + +QVACG+ A T+ +TD+G
Sbjct: 3130 GEYGRLGHGDNTTQLKPK----MVKVLL------GHRV---IQVACGSRDAQTLALTDEG 3176
Query: 264 YKLWSWGRGRSGVLGTG 280
++SWG G G LG G
Sbjct: 3177 L-VFSWGDGDFGKLGRG 3192
Score = 169 (64.5 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3148 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3204
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHGT P+
Sbjct: 3205 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQ 3253
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ G V++WG + G N + T N P L
Sbjct: 3254 VVEGL-RGKKIVHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3306
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3307 VQGL--EGQKI---TRVACGSSHSVAWT 3329
Score = 157 (60.3 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + + +V + G H++ +++AGD+++W
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L ++ D + P L+ G + D +ACG+ A T+ +TDD
Sbjct: 4121 G--KGR----YGRLGHGDSEDQLKPKLVEAL--QGYRVID---IACGSGDAQTLCLTDDD 4169
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4170 -TVWSWGDGDYGKLGRG 4185
Score = 155 (59.6 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 206
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 264
+G L + D P+L++G G K D V+CG+ A T+ VT++G
Sbjct: 578 --RG----NYGRLGHGSSEDQTIPMLVTGL--KGLKVID---VSCGSGDAQTLAVTENG- 625
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 151 (58.2 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 47/143 (32%), Positives = 73/143 (51%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 209
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG + R +++ I + V +A G AH+ +T G L++
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAAGGAHSACITAAG-DLFT 4119
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG G + D P +V
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLV 4142
Score = 145 (56.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 142 (55.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG ++A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3055 AVHSGGRHAMALTVDGKIFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3111
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3112 SSHSAAITSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3160
Query: 126 TCGS 129
CGS
Sbjct: 3161 ACGS 3164
Score = 139 (54.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 42/139 (30%), Positives = 59/139 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4260
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V G GE Y+WG N+ GQLG G + RP+++ +
Sbjct: 4261 TGSLHCVCCTEDG---LGE---VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---IN 4311
Query: 124 EVTCGSFHTALLTHRKRPN 142
V CGS HT + K N
Sbjct: 4312 RVACGSAHTLAWSTSKPAN 4330
Score = 137 (53.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTD-LGVVKVECGSQFSVALTKSGAVYTWG--K 4228
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY-KLWS 268
G L P + G G K + +A G+ H V T+DG ++++
Sbjct: 4229 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDGLGEVYT 4279
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG G LG G T P +V
Sbjct: 4280 WGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 136 (52.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3233
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3234 G--KG----DYFRLGHGTDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDTG-Q 3281
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3282 VYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 129 (50.5 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 39/131 (29%), Positives = 55/131 (41%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
S +G +LA+ G +W WG+ D G TP + +VKV CG
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCG 666
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S+ +AL G+ Y +WG +N +LG G E PK++E V +V
Sbjct: 667 SQFSIALTKDGQVY--------TWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK---VIDV 715
Query: 126 TCGSFHTALLT 136
GS H LT
Sbjct: 716 AAGSTHCLALT 726
Score = 129 (50.5 bits), Expect = 0.00057, P = 0.00057
Identities = 52/220 (23%), Positives = 96/220 (43%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y +GA G+LG+G ES P ++E+ V V G H
Sbjct: 4007 ADGKLY------ATGYGAG--GRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 4057
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 4058 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 4108
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 233
+ +++AGD+++WG KG L ++ D + P L+
Sbjct: 4109 ACITAAGDLFTWG--KGR----YGRLGHGDSEDQLKPKLV 4142
Score = 126 (49.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S AI ++G L+ WG L + G + P V GH V++V
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3160
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3161 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3211
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3212 CQIECGAQFSLALT 3225
Score = 109 (43.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 40/133 (30%), Positives = 55/133 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L T G+ +SWG + G+LG G + PK+IE QD +
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--IV 661
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 107 (42.7 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 87 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
+ WG N+ QLG G + S+++ P ET S V +V GS +T +
Sbjct: 2966 FVWGLNDKDQLG-GLKGSKIKVPSFSETL---SALNVVQVAGGSKSLFAVT--------V 3013
Query: 146 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVW 203
E + G NG+LG G + + +P Q+ L YV V+V G H ++ G ++
Sbjct: 3014 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIF 3073
Query: 204 SWG 206
SWG
Sbjct: 3074 SWG 3076
Score = 106 (42.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 38/134 (28%), Positives = 54/134 (40%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ + AGG S I AG L+ WG G P V G+ V+ +
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRY---GRLGHGDSEDQLKPKLVEALQGYRVIDI 4153
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D V +SWG + G+LG G + P I++ V
Sbjct: 4154 ACGSGDAQTLCLTDD-----DTV-WSWGDGDYGKLGRGGSDGCKVPMKIDSLTD---LGV 4204
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4205 VKVECGSQFSVALT 4218
Score = 99 (39.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T D L
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE-----DGLG 4275
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+ +T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4276 EV-YTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHTLAWSTS 4326
Score = 93 (37.8 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 63 ACGSEHVVA 71
ACGS H VA
Sbjct: 3319 ACGSSHSVA 3327
Score = 88 (36.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS--AGDVWSWGM 207
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGLGEVYTWG- 4281
Query: 208 EKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
+ G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4282 DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKIN---RVACGSAHTL 4321
Score = 84 (34.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 27/93 (29%), Positives = 40/93 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V+ G S+A+ G ++ WG D+ G + P + G V+ VA
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGK---GDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
GS H +AL ED +SWG+N+ Q
Sbjct: 717 AGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 80 (33.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+LA+ + G ++ WG+ D G P + +G V ++ CG++ +AL
Sbjct: 3169 TLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+G V ++WG + +LG G +P+++E + V G+ H
Sbjct: 3226 KSG--------VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK---IVHVAVGALHCL 3274
Query: 134 LLT 136
+T
Sbjct: 3275 AVT 3277
Score = 75 (31.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 39/149 (26%), Positives = 63/149 (42%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+ + + +GL + QLG G S + E + +V V G V+ G V++
Sbjct: 2961 IRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 205 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
G G LGL ++ +G P I+ + K V V G H + +T D
Sbjct: 3020 CGEATNGRLGL----GIS---SGTVPIPRQITALSNYVVK---KVAVHSGGRHAMALTVD 3069
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G K++SWG G G LG ++ P ++
Sbjct: 3070 G-KIFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Score = 71 (30.1 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3992 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4048
Query: 305 LNTGG 309
+N+GG
Sbjct: 4049 VNSGG 4053
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S +I F Q S W
Sbjct: 2660 YKWGSVTHRSVGVVKAFSANGKDVIVDFPQQSHW 2693
Score = 41 (19.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 226 DAISPILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 271
D PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3834 DYEDPIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3880
Score = 40 (19.1 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 16/75 (21%), Positives = 27/75 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V AG LA+ + WG+ D ++ P+ + +V +
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWGS---NDQCQHFDTLRITKPEPAALPGLDTKHIVGI 767
Query: 63 ACGSEHVVALVSAGE 77
ACG A S E
Sbjct: 768 ACGPAQSFAWSSCSE 782
Score = 39 (18.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2969 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Score = 38 (18.4 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 276 VLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 322
+LG + D A+ EE D+ NTG L + K LE A
Sbjct: 2913 ILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRK-KAAGLESA 2958
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 59 VVKVACGSEHVVALVSAGETY 79
VV++AC + + L G Y
Sbjct: 454 VVQIACAEKRFLILSRNGRVY 474
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 227 (85.0 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 82/252 (32%), Positives = 120/252 (47%)
Query: 54 FHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKII 111
F T ++ V+CG+ HVVAL G + +WG N GQLG G E P++I
Sbjct: 162 FPATTAIRQVSCGTAHVVALSEEG--------LLQAWGYNEQGQLGRGVTCEGLQAPRVI 213
Query: 112 ET---FNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 166
F ++P V +++CG +HTA L+ D E W GLG GQLGH + Q
Sbjct: 214 NAYAKFLDEAPELVKIMQLSCGEYHTAALS------DAGEVYTW--GLGSMGQLGHVSLQ 265
Query: 167 SA---LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTR 221
S L+P +V L V + V CG HT +S G +++WG + G LGL P +
Sbjct: 266 SGDKELIPRRVVGLDG-VSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFF 324
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ + S +L+ N P D VACG +HT++ +G ++ WG G K
Sbjct: 325 SVSNG--SEMLLR-NVPVLVIPTDVRLVACGHSHTLVYMREG-RICGWGYNSYGQAANEK 380
Query: 282 TIDFFAPAIVLW 293
+ + P+ V W
Sbjct: 381 SSYAWYPSPVDW 392
Score = 212 (79.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 81/298 (27%), Positives = 131/298 (43%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S+ + G + A+ + G+L+ WG + G + V P V V
Sbjct: 61 SRWLDISCGREHTAAVASDGSLFAWG---ANEYGQLGDGTEVGRKHPKKVKQLQSEFVKF 117
Query: 62 VACGSEHVVALVSAGE---TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE-TFNQD 117
V+CG+ A+ E T L + WG N L P++ F
Sbjct: 118 VSCGAFCTAAIAEPRENDGTLSTSRL--WVWGQNQGSNL----------PRLFSGAFPAT 165
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVK- 175
+ A+ +V+CG+ H L+ +L++ W G E GQLG G T L P +
Sbjct: 166 T--AIRQVSCGTAHVVALSEE----GLLQA--W--GYNEQGQLGRGVTCEGLQAPRVINA 215
Query: 176 ------ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA-I 228
E P+ V ++ + CG +HT+ +S AG+V++WG+ +G + SL ++GD +
Sbjct: 216 YAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGS-MGQLGHVSL---QSGDKEL 271
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 286
P + G K +VACG HT ++ +G L++WG G++G LG G FF
Sbjct: 272 IPRRVVGLDGVSMK-----EVACGGVHTCALSLEG-ALYAWGGGQAGQLGLGPQSGFF 323
Score = 195 (73.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 68/222 (30%), Positives = 100/222 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLR-PKII--ETFN----QDSPWAVYEVTCGSFHTALLTHRK 139
Y WG N +GQ G ++E LR PK + E F +S W +++CG HTA +
Sbjct: 23 YVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWL--DISCGREHTAAVAS-- 78
Query: 140 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 197
+ + +G E GQLG GT P++VK+L Q ++ V CG F T+ ++
Sbjct: 79 ------DGSLFAWGANEYGQLGDGTEVGRKHPKKVKQL-QSEFVKFVSCGAFCTAAIAEP 131
Query: 198 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 250
S +W WG +G L P L SG P + QV+
Sbjct: 132 RENDGTLSTSRLWVWGQNQGSNL----------------PRLFSGAFPATTAIR---QVS 172
Query: 251 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF-APAIV 291
CG AH V ++++G L +WG G LG G T + AP ++
Sbjct: 173 CGTAHVVALSEEGL-LQAWGYNEQGQLGRGVTCEGLQAPRVI 213
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 219 (82.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 58/201 (28%), Positives = 98/201 (48%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG ++A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3047 AVHSGGRHAMALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3103
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ S+GE Y SWG G+LG GD ++LRPK+++ V +V
Sbjct: 3104 SSHSAAITSSGELY--------SWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR---VVQV 3152
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
CGS L D E M +++G G+ G+LG G ++ +P+ ++ L +
Sbjct: 3153 ACGSRDAQTLAL----TD--EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQ 3205
Query: 186 VDCGLFHTSVVSSAGDVWSWG 206
++CG + ++ +G VW+WG
Sbjct: 3206 IECGAQFSLALTKSGVVWTWG 3226
Score = 216 (81.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 60/203 (29%), Positives = 95/203 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G L+ WG D G + P + G VV +A G
Sbjct: 4041 AVNSGGKHCLALSSEGELYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4097
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + ++GE Y +WG G+LG GD E +L+PK++E V +V
Sbjct: 4098 GAHSACITASGELY--------TWGKGRYGRLGHGDSEDQLKPKLVEALQGHR---VIDV 4146
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + M W++G G+ G+LG G + VP ++ L + +
Sbjct: 4147 ACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4197
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG 206
V V+CG + ++ +G V++WG
Sbjct: 4198 VKVECGSQFSVALTKSGAVYTWG 4220
Score = 169 (64.5 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 64/208 (30%), Positives = 93/208 (44%)
Query: 59 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 112
+VKV G H V V+ G E +V +SWG + G+LG G E P+ IE
Sbjct: 3140 LVKVLLG--HRVVQVACGSRDAQTLALTDEGMV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3196
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
N V ++ CG+ + LT + WT+G G+ +LGHGT P+
Sbjct: 3197 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQ 3245
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V+ L + +V V G H V+ G V++WG + G N + T N P L
Sbjct: 3246 MVEGL-RGKKIVHVAVGALHCLAVTETGQVFAWG-DNDHGQQGNGTTTVNR-----KPTL 3298
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ G G K +VACG++H+V T
Sbjct: 3299 VQGL--EGQKI---TRVACGSSHSVAWT 3321
Score = 164 (62.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 60/201 (29%), Positives = 102/201 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPND 143
Y+ G NG+LGLG + P+ I S + V +V G H LT
Sbjct: 3010 YACGEATNGRLGLGLSSGTIPIPRQISAL---SNYVVKKVAVHSGGRHAMALT------- 3059
Query: 144 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 203
++ +++G G++G+LGH + + P ++ L + + + CG H++ ++S+G+++
Sbjct: 3060 -VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELY 3117
Query: 204 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLV 259
SWG+ E G LG N + R + + +L+ G + VQVACG+ A T+ +
Sbjct: 3118 SWGLGEYGRLGHGDNTTQLRPK----LVKVLL------GHRV---VQVACGSRDAQTLAL 3164
Query: 260 TDDGYKLWSWGRGRSGVLGTG 280
TD+G ++SWG G G LG G
Sbjct: 3165 TDEGM-VFSWGDGDFGKLGRG 3184
Score = 156 (60.0 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E +++G E+G+LGHG P ++ L + V +V + G H++ ++++G++++W
Sbjct: 4055 EGELYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGVEVVDIAAGGAHSACITASGELYTW 4113
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 263
G KG L ++ D + P L+ H + VACG+ A T+ +TDD
Sbjct: 4114 G--KGR----YGRLGHGDSEDQLKPKLVEALQGHRV-----IDVACGSGDAQTLCLTDDD 4162
Query: 264 YKLWSWGRGRSGVLGTG 280
+WSWG G G LG G
Sbjct: 4163 M-VWSWGDGDYGKLGRG 4178
Score = 154 (59.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 48/168 (28%), Positives = 76/168 (45%)
Query: 44 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 101
++ P V ++K+A +H +AL GE + SWG + G+LG GD
Sbjct: 470 TTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVF--------SWGCGDGGRLGHGD 521
Query: 102 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 160
P +I F+ + V + CGS ++A +T + T+G G G+L
Sbjct: 522 TTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAIT--------ADGELHTWGRGNYGRL 573
Query: 161 GHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
GHG+++ P V L + + ++ V CG T V+ G VWSWG
Sbjct: 574 GHGSSEDQTTPMLVTAL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 620
Score = 152 (58.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 43/141 (30%), Positives = 71/141 (50%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGMEKG 210
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+++SWG +
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIRKVAVNSGGKHCLALSSEGELYSWGEAE- 4065
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
+ L P +I + + V +A G AH+ +T G +L++WG
Sbjct: 4066 -----DGKLGHGNRSPCDRPRVIESL-----RGVEVVDIAAGGAHSACITASG-ELYTWG 4114
Query: 271 RGRSGVLGTGKTIDFFAPAIV 291
+GR G LG G + D P +V
Sbjct: 4115 KGRYGRLGHGDSEDQLKPKLV 4135
Score = 150 (57.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKEL---PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+++G G+ G+LGHG T P + P +V + CG +++ +++ G++ +WG
Sbjct: 507 FSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWG 566
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 264
+G L + D +P+L++ G K D VACG+ A T+ VT++G
Sbjct: 567 --RG----NYGRLGHGSSEDQTTPMLVTAL--KGLKVID---VACGSGDAQTLAVTENG- 614
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++WSWG G G LG G + P +V
Sbjct: 615 QVWSWGDGDYGKLGRGGSDGCKTPKLV 641
Score = 145 (56.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+SWG + G+LG G + PK++E QD + +V CGS + LT +
Sbjct: 617 WSWGDGDYGKLGRGGSDGCKTPKLVEKL-QDLD--IVKVCCGSQFSVALTK--------D 665
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T+G G+N +LGHGT + P+ + L Q +V + G H ++ G+V SWG
Sbjct: 666 GQVYTWGKGDNQRLGHGTDEHVRYPKLLDSL-QGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Score = 143 (55.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 151 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGME 208
T+G G G+LGHG+++ P V L + + ++ V CG T V+ G VWSWG +
Sbjct: 564 TWGRGNYGRLGHGSSEDQTTPMLVTAL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-D 621
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKL 266
G L R + +P L+ K QD V+V CG+ +V +T DG ++
Sbjct: 622 GDYG-----KLGRGGSDGCKTPKLVE-------KLQDLDIVKVCCGSQFSVALTKDG-QV 668
Query: 267 WSWGRGRSGVLGTG 280
++WG+G + LG G
Sbjct: 669 YTWGKGDNQRLGHG 682
Score = 142 (55.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+ M W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++W
Sbjct: 4161 DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTW 4219
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P + G G K + +A G+ H V T+DG +
Sbjct: 4220 G--KG----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-E 4267
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G LG G T P +V
Sbjct: 4268 VYTWGDNDEGQLGDGTTNAIQRPRLV 4293
Score = 141 (54.7 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 36/133 (27%), Positives = 58/133 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVA 3259
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ G+ + +WG N++GQ G G +P +++ +
Sbjct: 3260 VGALHCLAVTETGQVF--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3308
Query: 124 EVTCGSFHTALLT 136
V CGS H+ T
Sbjct: 3309 RVACGSSHSVAWT 3321
Score = 139 (54.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 41/139 (29%), Positives = 58/139 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S P V G V+ +A
Sbjct: 4197 VVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4253
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H V GE Y +WG N+ GQLG G + RP+++ +
Sbjct: 4254 TGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---IN 4302
Query: 124 EVTCGSFHTALLTHRKRPN 142
V CGS HT + K N
Sbjct: 4303 RVACGSAHTLAWSTSKPTN 4321
Score = 138 (53.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 44/148 (29%), Positives = 67/148 (45%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVW 203
E + G NG+LG G + + +P Q+ L YV V+V G H ++ G V+
Sbjct: 3006 EGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVF 3065
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 263
SWG +G + L + P LI + +D +ACG++H+ +T G
Sbjct: 3066 SWG--EG----DDGKLGHFSRMNCDKPRLIEALKTK--RIRD---IACGSSHSAAITSSG 3114
Query: 264 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+L+SWG G G LG G P +V
Sbjct: 3115 -ELYSWGLGEYGRLGHGDNTTQLRPKLV 3141
Score = 135 (52.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 47/145 (32%), Positives = 69/145 (47%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGM 207
+++GLGE G+LGHG + L P+ VK L + +V V CG T ++ G V+SWG
Sbjct: 3117 YSWGLGEYGRLGHGDNTTQLRPKLVKVLLGH-RVVQVACGSRDAQTLALTDEGMVFSWG- 3174
Query: 208 EKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
+ G L R + P I NG Q Q+ CGA ++ +T G +
Sbjct: 3175 DGDFG-----KLGRGGSEGCNIPQNIERLNG------QGVCQIECGAQFSLALTKSGV-V 3222
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAIV 291
W+WG+G LG G + P +V
Sbjct: 3223 WTWGKGDYFRLGHGTDVHVRKPQMV 3247
Score = 135 (52.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E M +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3167 EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3225
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G KG L P ++ G G K V VA GA H + VT+ G +
Sbjct: 3226 G--KG----DYFRLGHGTDVHVRKPQMVEGL--RGKKI---VHVAVGALHCLAVTETG-Q 3273
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G G G T P +V
Sbjct: 3274 VFAWGDNDHGQQGNGTTTVNRKPTLV 3299
Score = 127 (49.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 42/143 (29%), Positives = 60/143 (41%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP V +VKV CGS+
Sbjct: 602 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQF 658
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
VAL G+ Y +WG +N +LG G E PK++++ V ++ G
Sbjct: 659 SVALTKDGQVY--------TWGKGDNQRLGHGTDEHVRYPKLLDSLQGKR---VVDIAVG 707
Query: 129 SFHTALLT-----HRKRPNDMLE 146
S H LT H ND L+
Sbjct: 708 STHCLALTEEGEVHSWGSNDKLQ 730
Score = 125 (49.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S AI ++G L+ WG L + G + P V GH VV+V
Sbjct: 3096 RIRDIACGSSHSAAITSSGELYSWG---LGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQV 3152
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E G + +SWG + G+LG G E P+ IE N V
Sbjct: 3153 ACGSRDAQTLALTDE---G---MVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3203
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3204 CQIECGAQFSLALT 3217
Score = 117 (46.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 42/134 (31%), Positives = 56/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
Q+ + G S AI G L WG + G S TP V G V+ V
Sbjct: 542 QVVHIACGSTYSAAITADGELHTWGR---GNYGRLGHGSSEDQTTPMLVTALKGLKVIDV 598
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L T G+ +SWG + G+LG G + PK++E QD +
Sbjct: 599 ACGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLVEKL-QDLD--I 649
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 650 VKVCCGSQFSVALT 663
Score = 114 (45.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 39/134 (29%), Positives = 56/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ + AGG S I +G L+ WG G P V GH V+ V
Sbjct: 4090 EVVDIAAGGAHSACITASGELYTWGKGRY---GRLGHGDSEDQLKPKLVEALQGHRVIDV 4146
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L + D+V +SWG + G+LG G + P I++ + V
Sbjct: 4147 ACGSGDAQTLCLTDD-----DMV-WSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGV 4197
Query: 123 YEVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4198 VKVECGSQFSVALT 4211
Score = 98 (39.6 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4217 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4274
Query: 210 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 257
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4275 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKIN---RVACGSAHTL 4312
Score = 95 (38.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4217 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4265
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4266 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHTLAWSTS 4317
Score = 92 (37.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G + LA+ G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3254 KIVHVAVGALHCLAVTETGQVFAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3310
Query: 63 ACGSEHVVALVSAGET 78
ACGS H VA + T
Sbjct: 3311 ACGSSHSVAWTTVDVT 3326
Score = 88 (36.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 42/158 (26%), Positives = 68/158 (43%)
Query: 23 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 82
+++WG L D GG PS VV+VA GS+ + A+ + G+ Y
Sbjct: 2957 VFVWG---LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY--- 3010
Query: 83 DLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 139
C G NG+LGLG + P+ I S + V +V G H LT
Sbjct: 3011 --AC---GEATNGRLGLGLSSGTIPIPRQISAL---SNYVVKKVAVHSGGRHAMALT--- 3059
Query: 140 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
++ +++G G++G+LGH + + P ++ L
Sbjct: 3060 -----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 3092
Score = 83 (34.3 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 32/125 (25%), Positives = 51/125 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V G S+A+ G ++ WG D+ G + P + G VV +A
Sbjct: 649 IVKVCCGSQFSVALTKDGQVYTWGK---GDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIA 705
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H +AL GE + SWG+N+ Q ++ +PK + N +
Sbjct: 706 VGSTHCLALTEEGEVH--------SWGSNDKLQHFDTLFSNKKQPKALPGLNSKH---IV 754
Query: 124 EVTCG 128
++CG
Sbjct: 755 GISCG 759
Score = 68 (29.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+ G VT DG KL++ G G G LG G T P ++ + F ++
Sbjct: 3985 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIRKVA 4041
Query: 305 LNTGG 309
+N+GG
Sbjct: 4042 VNSGG 4046
Score = 43 (20.2 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
Y WG+ + +G+ S +I F Q S W
Sbjct: 2652 YKWGSVTHRSVGVVKAFSANGKDVIVDFPQQSHW 2685
Score = 40 (19.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 230 PILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 271
PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3831 PIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3873
Score = 39 (18.8 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++ + G LA+ G + WG N L T FS + P + + +V
Sbjct: 700 RVVDIAVGSTHCLALTEEGEVHSWGSNDKLQHFDTL--FS--NKKQPKALPGLNSKHIVG 755
Query: 62 VACG 65
++CG
Sbjct: 756 ISCG 759
Score = 37 (18.1 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 218 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
SL + G + ++SG G P+ D + C + TD
Sbjct: 3556 SLRSGDKGKEVLSAVLSGMGTACPQVADMLLELCVTELEDVATD 3599
Score = 37 (18.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 9/50 (18%), Positives = 23/50 (46%)
Query: 309 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
GL+D+ + L+G++ + S + + ++Q +A G ++
Sbjct: 2961 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3010
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 204 (76.9 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 55/201 (27%), Positives = 97/201 (48%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG +LA+ G ++ WG + G + + P V + VACG
Sbjct: 3077 AVHSGGKHALALTLDGKVFSWGE---GEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACG 3133
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ S GE Y +WG G+LG GD ++L+PK++ + V +V
Sbjct: 3134 SSHSAAISSQGELY--------TWGLGEYGRLGHGDNTTQLKPKLVTAL---AGRRVVQV 3182
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
CGS L + + +++G G+ G+LG G ++ + P +++ L + +V
Sbjct: 3183 ACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSG-IGVVQ 3235
Query: 186 VDCGLFHTSVVSSAGDVWSWG 206
++CG + ++ AG+VW+WG
Sbjct: 3236 IECGAQFSLALTRAGEVWTWG 3256
Score = 189 (71.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 52/149 (34%), Positives = 77/149 (51%)
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V G +H +AL + GE Y +WG +G+LG G+R S RPK++E N S
Sbjct: 4139 VAVNSGGKHCLALTTEGEVY--------AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS- 4189
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V ++ CGS H+A +T +L T+G G G+LGHG ++ L P+ V+ L
Sbjct: 4190 --VADIACGSAHSAAIT---ASGHVL-----TWGKGRYGRLGHGDSEDQLRPKLVEALLG 4239
Query: 180 YVYLVSVDCGL--FHTSVVSSAGDVWSWG 206
Y + + CG T ++ +VWSWG
Sbjct: 4240 Y-RAIDIACGSGDAQTLCITDDDNVWSWG 4267
Score = 185 (70.2 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 60/218 (27%), Positives = 97/218 (44%)
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
SA T G L +WG G+LG GD E +LRPK++E + ++ CGS
Sbjct: 4200 SAAITASGHVL---TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYRAIDIACGSGDAQ 4253
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L N W++G G+ G+LG G + +P +++ L + +V V+CG +
Sbjct: 4254 TLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-LGVVKVECGSQFS 4306
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 253
++ +G V++WG KG L P ++ G K + +A G+
Sbjct: 4307 VALTKSGAVYTWG--KG----DFHRLGHGSVDHVRRPKKVAAL--QGKKI---ISIATGS 4355
Query: 254 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
H V +D G ++++WG G LG G P +V
Sbjct: 4356 LHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Score = 168 (64.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 64/216 (29%), Positives = 100/216 (46%)
Query: 82 EDLVC--YSWGANNNGQLGLGDRESRLRPKIIETFNQD-SPWAVYEVTCGSFHTALLTHR 138
+DL C WG N+ QLG G + S+++ + TF+Q S + GS +++
Sbjct: 2982 QDLPCTVMVWGLNDKEQLG-GLKGSKVK---VPTFSQTISRLRPIHIAGGSKSLFIVSQ- 3036
Query: 139 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVS 197
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3037 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
Query: 198 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 255
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 3136
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ ++ G +L++WG G G LG G P +V
Sbjct: 3137 SAAISSQG-ELYTWGLGEYGRLGHGDNTTQLKPKLV 3171
Score = 161 (61.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 57/225 (25%), Positives = 105/225 (46%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG +
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWG--R 694
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G A L + D P L+ H D V + G AH++ +T +G +++W
Sbjct: 695 GT----YARLGHGNSDDRSLPTLVVALSDH--MVVD-VALGSGDAHSLALTSEGL-VFAW 746
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLTE------EFK-----QDELNTGG----LDDEI 314
G G G LG G P +V P + +F + +L T G L ++
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL 806
Query: 315 KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFG 359
+ ++G +L S+++ +++ +SV A G +FG
Sbjct: 807 VERSVQGCSV--PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Score = 154 (59.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/150 (32%), Positives = 70/150 (46%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S+ P V G ++ +A
Sbjct: 4296 VVKVECGSQFSVALTKSGAVYTWGK---GDFHRLGHGSVDHVRRPKKVAALQGKKIISIA 4352
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H VA +GE Y +WG N+ GQLG G + RP+++ +
Sbjct: 4353 TGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTAIQRPRLVAALQGKH---IV 4401
Query: 124 EVTCGSFHT-AL----LTHRKRP--NDMLE 146
+VTCGS HT AL L+ R RP N LE
Sbjct: 4402 KVTCGSAHTLALSTSQLSERLRPLPNPPLE 4431
Score = 149 (57.5 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ ++ G SLA+ AG +W WG GG V P P+ G V+ VA
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLG-HGGDQHVRK--PQPIGGLRGRRVIHVA 3289
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ AG+ Y +WG N++GQ G G+ +P ++ D+ + V
Sbjct: 3290 VGALHCLAVTDAGQVY--------AWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF-VN 3338
Query: 124 EVTCGSFHT 132
V CGS H+
Sbjct: 3339 RVACGSSHS 3347
Score = 148 (57.2 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 70/274 (25%), Positives = 117/274 (42%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
ED +SWG + G+LG G E P IE S V ++ CG+ + LT R
Sbjct: 3196 EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL---SGIGVVQIECGAQFSLALT---RA 3249
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
++ WT+G G+ +LGHG Q P+ + L + ++ V G H V+ AG
Sbjct: 3250 GEV-----WTWGKGDYYRLGHGGDQHVRKPQPIGGL-RGRRVIHVAVGALHCLAVTDAGQ 3303
Query: 202 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
V++WG + G + + N+ P L+ G F + +VACG++H++
Sbjct: 3304 VYAWG-DNDHGQQGSGNTFVNK-----KPALVIGLDA---VFVN--RVACGSSHSIAW-- 3350
Query: 262 DGYKLWSWGRGRSGVLGTGKTID-FFAPAIVLWPPLT-EEFKQDE--LNTGGLDDEIKTK 317
G S + G + T D ++ ++ T + KQ+ LN L + +
Sbjct: 3351 -GLPNASSDEEKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESLA-- 3407
Query: 318 DLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS 351
LE R L + M +LQ++ ++ S
Sbjct: 3408 -LETPAARQAALGHVLRAMSILQARQLIVAALTS 3440
Score = 147 (56.8 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 48/143 (33%), Positives = 74/143 (51%)
Query: 153 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGM-EK 209
G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V++WG E
Sbjct: 4107 GYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 210 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G LG S R P L+ +G D +ACG+AH+ +T G+ L +
Sbjct: 4166 GKLGHGNRMSYDR--------PKLVEHL--NGMSVAD---IACGSAHSAAITASGHVL-T 4211
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG+GR G LG G + D P +V
Sbjct: 4212 WGKGRYGRLGHGDSEDQLRPKLV 4234
Score = 146 (56.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ G ++ WG + G + +S P V +G +V +ACG
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGE---GEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ ++G +WG G+LG GD E +LRPK++E + ++
Sbjct: 4197 SAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYRAIDI 4245
Query: 126 TCGS 129
CGS
Sbjct: 4246 ACGS 4249
Score = 135 (52.6 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 66 SEHVVALVS--AGETYK----GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
S+H+V V+ +G+ + E LV ++WG + G+LG G+ L+P ++E+ +
Sbjct: 718 SDHMVVDVALGSGDAHSLALTSEGLV-FAWGDGDYGKLGNGNCNGSLQPILVESLPR--- 773
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V V GS + L+ + ++ C LG QL + Q VP V L Q
Sbjct: 774 --VQRVFAGSQFSVALSSEGQLYTWGKATC----LGH--QLVERSVQGCSVPRLVSSL-Q 824
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+ +V V + H +SS+G+V+ WG +CP AS++ +PIL+S
Sbjct: 825 HKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPILVSL---- 877
Query: 240 GPKFQDPVQ-VACGAAHTVLVTDDGYK 265
P F P +AC +A +++ T ++
Sbjct: 878 -PTF--PASGIACTSAQSLVWTQSSHQ 901
Score = 130 (50.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
YSWG + +LG GD +R P I Q +VY CG ++A +T ++L
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY---CGCSYSAAITCG---GNLL- 690
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSW 205
T+G G +LGHG + +P V L ++ + V++ G H+ ++S G V++W
Sbjct: 691 ----TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 206 GM----EKGLGLCPNASL 219
G + G G C N SL
Sbjct: 747 GDGDYGKLGNGNC-NGSL 763
Score = 120 (47.3 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 42/134 (31%), Positives = 55/134 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G S AI + G L+ WG L + G + P V G VV+V
Sbjct: 3126 KIRDVACGSSHSAAISSQGELYTWG---LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQV 3182
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L ED +SWG + G+LG G E P IE S V
Sbjct: 3183 ACGSRDAQTLALT------EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL---SGIGV 3233
Query: 123 YEVTCGSFHTALLT 136
++ CG+ + LT
Sbjct: 3234 VQIECGAQFSLALT 3247
Score = 109 (43.4 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 32/112 (28%), Positives = 58/112 (51%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+ +LGHG+ P++V L Q ++S+ G H S +G+V++WG +
Sbjct: 4316 YTWGKGDFHRLGHGSVDHVRRPKKVAAL-QGKKIISIATGSLHCVACSDSGEVYTWG-DN 4373
Query: 210 GLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVT 260
G + ++T + P L++ G H V+V CG+AHT+ ++
Sbjct: 4374 DEGQLGDGTVTAIQR-----PRLVAALQGKH------IVKVTCGSAHTLALS 4414
Score = 104 (41.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4052 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4103
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 203
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4104 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 204 SWG 206
+WG
Sbjct: 4159 AWG 4161
Score = 90 (36.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 47/139 (33%), Positives = 61/139 (43%)
Query: 1 MSQIC--SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 58
+ Q C SV G S AI G L WG + G S S P+ V H
Sbjct: 665 LEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY--ARLGHGNSDDRSL-PTLVVALSDHM 721
Query: 59 VVKVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
VV VA GS H +AL S G LV ++WG + G+LG G+ L+P ++E+ +
Sbjct: 722 VVDVALGSGDAHSLALTSEG-------LV-FAWGDGDYGKLGNGNCNGSLQPILVESLPR 773
Query: 117 DSPWAVYEVTCGS-FHTAL 134
V V GS F AL
Sbjct: 774 -----VQRVFAGSQFSVAL 787
Score = 83 (34.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 35/133 (26%), Positives = 51/133 (38%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S AI +G + WG G P V G+ + +A
Sbjct: 4190 VADIACGSAHSAAITASGHVLTWGKGRY---GRLGHGDSEDQLRPKLVEALLGYRAIDIA 4246
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS L + D V +SWG + G+LG G + P IE+ + V
Sbjct: 4247 CGSGDAQTLCITDD-----DNV-WSWGDGDYGKLGRGGSDGCKLPYKIESL---AGLGVV 4297
Query: 124 EVTCGSFHTALLT 136
+V CGS + LT
Sbjct: 4298 KVECGSQFSVALT 4310
Score = 80 (33.2 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G + LA+ +AG ++ WG+ D +G + + P+ V V +V
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGSGNTFVNKKPALVIGLDAVFVNRV 3340
Query: 63 ACGSEHVVA 71
ACGS H +A
Sbjct: 3341 ACGSSHSIA 3349
Score = 80 (33.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 27/98 (27%), Positives = 42/98 (42%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCP-LPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
+ ++ V AG S+A+ + G L+ WG L E S+ P V +
Sbjct: 771 LPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER--SVQGCSVPRLVSSLQHKRI 828
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 97
V VA H +AL S+GE + WG N++ Q+
Sbjct: 829 VDVAVSVAHCLALSSSGEVF--------GWGRNDSQQI 858
Score = 76 (31.8 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 304
PVQ+A G VT DG KL++ G G G LG G + + P ++ L F K+
Sbjct: 4084 PVQLAGGEQSLFAVTPDG-KLFATGYGSGGRLGVGGSDSWAIPTLL--GSLQHVFVKKVA 4140
Query: 305 LNTGG 309
+N+GG
Sbjct: 4141 VNSGG 4145
Score = 72 (30.4 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 32/128 (25%), Positives = 50/128 (39%)
Query: 11 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 70
G LAID+ + WG + G + P+ + H V V CG +
Sbjct: 625 GRHFLAIDSNHNAYSWGT---GEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 71 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS- 129
A+ G +L+ +WG +LG G+ + R P ++ S V +V GS
Sbjct: 682 AITCGG------NLL--TWGRGTYARLGHGNSDDRSLPTLVVAL---SDHMVVDVALGSG 730
Query: 130 -FHTALLT 136
H+ LT
Sbjct: 731 DAHSLALT 738
Score = 61 (26.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G SLA+ + G ++ WG+ D G + S P V V +V GS+
Sbjct: 729 SGDAHSLALTSEGLVFAWGD---GDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQF 783
Query: 69 VVALVSAGETYKGEDLVC 86
VAL S G+ Y C
Sbjct: 784 SVALSSEGQLYTWGKATC 801
Score = 39 (18.8 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 196 VSSAGDV--WSW 205
+SS GDV W+W
Sbjct: 3906 ISSTGDVHKWAW 3917
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 169 (64.5 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
W +G E GQLG G TQ P V+ L LV + G +H++ +++ G+V+ WG E
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLT-LVDIAAGGWHSTALTNEGEVYGWGRGE 276
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LG N ++ ++ L++G +D +QV+CG H+V +T DG +++
Sbjct: 277 HGRLGFGDNDKSSKM-LPQKVN--LLAG--------EDIIQVSCGGTHSVALTRDG-RIF 324
Query: 268 SWGRGRSGVLGTGKTIDFFAPAI--VLWPPLTEEFKQ-DELNTG 308
S+GRG G LG G+ + P + PP F DE + G
Sbjct: 325 SFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDG 368
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 88 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 147
+WG+ +GQLGLG E + +++ P+ V V GS ++ + +
Sbjct: 9 AWGSGEDGQLGLGTDEEKELASVVDALE---PFNVRSVVGGSRNSLAICD--------DG 57
Query: 148 MCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T+G + G LGH T++ P VK L V +V G +H V G ++WG
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLAN-VKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYK 265
+ G C +++E G + ++ P Q V QVA G H+V++T +GY
Sbjct: 117 GNE-YGQCGEEP-SKDETGRPVRRDIVI---PKRCAQQLTVRQVAAGGTHSVVLTREGY- 170
Query: 266 LWSWGR 271
+W+WG+
Sbjct: 171 VWTWGQ 176
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/136 (30%), Positives = 61/136 (44%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
+ G +LA+ G LW WGN T G + S+ P PV T+V +A G
Sbjct: 201 IAVGAFHNLALKEDGTLWAWGNNEYGQLGT--GDTQPRSY-PIPVQGLDDLTLVDIAAGG 257
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--SRLRPKIIETFNQDSPWAVYE 124
H AL + GE Y WG +G+LG GD + S++ P+ + + + +
Sbjct: 258 WHSTALTNEGEVY--------GWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGED---IIQ 306
Query: 125 VTCGSFHTALLTHRKR 140
V+CG H+ LT R
Sbjct: 307 VSCGGTHSVALTRDGR 322
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 62/230 (26%), Positives = 103/230 (44%)
Query: 48 PSPVWDFHGHTV-VKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRE 103
P P D +V V+V G E+V L++ G + ED ++WG N GQLG GD +
Sbjct: 177 PWPPGDIKQISVPVRVQ-GLENV-RLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQ 234
Query: 104 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 163
R P ++ + + ++ G +H+ LT+ E + +G GE+G+LG G
Sbjct: 235 PRSYPIPVQGLDD---LTLVDIAAGGWHSTALTN--------EGEVYGWGRGEHGRLGFG 283
Query: 164 TTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
S ++P++V L ++ V CG H+ ++ G ++S+G L +T
Sbjct: 284 DNDKSSKMLPQKVNLLAGED-IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTT 342
Query: 222 NEAGDAISPILI---SGNGPHGPKFQD----PVQVACGAAHTVLVTDDGY 264
+ + PI I G H + D VACG HT+ + + Y
Sbjct: 343 GQPLEL--PIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKY 390
Score = 102 (41.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
G + VP +V+ L + V L++V G FH + G +W+WG + L
Sbjct: 181 GDIKQISVPVRVQGL-ENVRLIAV--GAFHNLALKEDGTLWAWGNNE------YGQLGTG 231
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ PI + G V +A G H+ +T++G +++ WGRG G LG G
Sbjct: 232 DTQPRSYPIPVQGLDD-----LTLVDIAAGGWHSTALTNEG-EVYGWGRGEHGRLGFG 283
Score = 90 (36.7 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 44/153 (28%), Positives = 58/153 (37%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-SLVSSFTPSPVWDFHGHTVVKVAC 64
SV G SLAI + G L+ WG T G + TPS V +V+ A
Sbjct: 42 SVVGGSRNSLAICDDGKLFTWG---WNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAI 98
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG---LGDRESR-LRPKIIETFNQDSPW 120
G H +A+ G Y +WG N GQ G D R +R I+
Sbjct: 99 GGWHCLAVDDQGRAY--------AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQL 150
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 153
V +V G H+ +LT E WT+G
Sbjct: 151 TVRQVAAGGTHSVVLTR--------EGYVWTWG 175
Score = 86 (35.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
+A GA H + + +DG LW+WG G LGTG T
Sbjct: 201 IAVGAFHNLALKEDG-TLWAWGNNEYGQLGTGDT 233
Score = 58 (25.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/79 (29%), Positives = 29/79 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGH 57
+I GG LA+D+ G + WG C S E G + P
Sbjct: 92 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV-IPKRCAQQL 150
Query: 58 TVVKVACGSEHVVALVSAG 76
TV +VA G H V L G
Sbjct: 151 TVRQVAAGGTHSVVLTREG 169
Score = 57 (25.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 22/70 (31%), Positives = 29/70 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V AGG S+ + G +W WG P P G +S P V V +A G+
Sbjct: 155 VAAGGTHSVVLTREGYVWTWGQ-PWPP----GDIKQIS--VPVRVQGLEN--VRLIAVGA 205
Query: 67 EHVVALVSAG 76
H +AL G
Sbjct: 206 FHNLALKEDG 215
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 160 (61.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 58/191 (30%), Positives = 91/191 (47%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
++ +ACG HV+AL S G+ + +WG ++GQLG GD + PK++ F+ D
Sbjct: 49 SISMLACGGAHVIALTSGGKVF--------TWGRGSSGQLGHGDILNITLPKLVSFFD-D 99
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGHGTTQSALVPEQVKE 176
S + + G H+ ++ +S C +T G G GQLGHG T S P +V
Sbjct: 100 S--VITQAAAGWSHSGFVS---------DSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSH 148
Query: 177 LPQ-YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRN----EAG-DAI 228
V +V+ CG+ H+ V+ + V +G K G LG + + N +G +
Sbjct: 149 FNNDSVKMVA--CGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV 206
Query: 229 SPILISGNGPH 239
+ IS NG H
Sbjct: 207 EVVRISANGDH 217
Score = 142 (55.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 46/148 (31%), Positives = 69/148 (46%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W++G G +GQLG Q L+P Q+ L + + CG H ++S G V++W
Sbjct: 14 EEQVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSGGKVFTW 72
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDG 263
G +G + L + + P L+S F D V Q A G +H+ V+D G
Sbjct: 73 G--RG----SSGQLGHGDILNITLPKLVSF-------FDDSVITQAAAGWSHSGFVSDSG 119
Query: 264 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++ G G G LG G T+ PA V
Sbjct: 120 C-IFTCGNGSFGQLGHGDTLSLSTPAKV 146
Score = 129 (50.5 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 76 GETY--KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
GET + E+ +SWGA +GQLG + L P+++ + S + + CG H
Sbjct: 5 GETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPS---ISMLACGGAHVI 61
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
LT + +T+G G +GQLGHG + +P+ V V + G H+
Sbjct: 62 ALTSGGK--------VFTWGRGSSGQLGHGDILNITLPKLVSFFDDSV-ITQAAAGWSHS 112
Query: 194 SVVSSAGDVWSWG 206
VS +G +++ G
Sbjct: 113 GFVSDSGCIFTCG 125
Score = 127 (49.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 45/145 (31%), Positives = 69/145 (47%)
Query: 67 EHVVALVSAGETYKG--EDLVC-YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
+ V+ +AG ++ G D C ++ G + GQLG GD S P + FN DS V
Sbjct: 99 DSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDS---VK 155
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYV 181
V CG H+ +L + +C FG G+ GQLG + + S +P V L V
Sbjct: 156 MVACGMRHSLVLFAGNQ-------VCG-FGSGKRGQLGFSSDRIKSVNLPCVVSGLKD-V 206
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWG 206
+V + H++ +S+ G +SWG
Sbjct: 207 EVVRISANGDHSAAISADGQFFSWG 231
Score = 97 (39.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 40/137 (29%), Positives = 58/137 (42%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTV 59
+ I + GG +A+ + G ++ WG SS + G + + T P V F +
Sbjct: 47 LPSISMLACGGAHVIALTSGGKVFTWGR----GSSGQLGHGDILNITLPKLVSFFDDSVI 102
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVC-YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
+ A G H VS D C ++ G + GQLG GD S P + FN DS
Sbjct: 103 TQAAAGWSHS-GFVS--------DSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDS 153
Query: 119 PWAVYEVTCGSFHTALL 135
V V CG H+ +L
Sbjct: 154 ---VKMVACGMRHSLVL 167
Score = 95 (38.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 306
+Q+A GA H+ VT++G ++ +WG G G LG G T D +P +V + K+ ++
Sbjct: 308 MQIAAGAEHSAAVTENG-EVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVY 366
Query: 307 TG-GLDDEIKTK 317
G G +K K
Sbjct: 367 CGSGFTYAVKRK 378
Score = 79 (32.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/102 (29%), Positives = 44/102 (43%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S I AG S + ++G ++ GN G +S TP+ V F+ +V
Sbjct: 100 SVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL---GHGDTLSLSTPAKVSHFNNDSVKM 156
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DR 102
VACG H + L + + VC +G+ GQLG DR
Sbjct: 157 VACGMRHSLVLFAGNQ-------VC-GFGSGKRGQLGFSSDR 190
Score = 69 (29.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/146 (25%), Positives = 59/146 (40%)
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
SP + EV G H LLT ++ + G N Q Q +++
Sbjct: 248 SPLSFREVAVGWNHALLLT--------VDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKV 299
Query: 178 PQY--VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILI 233
P + V ++ + G H++ V+ G+V W WG LGL D SP L+
Sbjct: 300 PDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGL--------GNTNDQTSPELV 351
Query: 234 SGNGPHGPKFQDPVQVACGAAHTVLV 259
S G + ++ ++V CG+ T V
Sbjct: 352 S-LGSIDLRTKE-IKVYCGSGFTYAV 375
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 184 (69.8 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 63/216 (29%), Positives = 98/216 (45%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVV 60
Q+ + G S+A+ N G L++WG ++ + G + T SP + V
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGE----NTHGQLGLRKEQAGTQSPQHLQSLCEIPVA 171
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+++ G H L +G V + WG+N+ GQLGLGD + R P I+++
Sbjct: 172 QISAGGNHSFVLSLSG--------VVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK-- 221
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 180
++CG HTA L+ +TFG G GQLGH + + P + EL +
Sbjct: 222 -TVSISCGGEHTATLSKG--------GTVFTFGSGGFGQLGHNSLKDEHHPRLIAEL--W 270
Query: 181 VYLVS-VDCGLFHTSVVSSAGD-VWSWG--MEKGLG 212
VS V CG HT V + ++S+G M+ LG
Sbjct: 271 GSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLG 306
Score = 178 (67.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 57/159 (35%), Positives = 75/159 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG G T+ VP VK L VS+ CG HT+ +S G V+++G
Sbjct: 190 FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK-TVSISCGGEHTATLSKGGTVFTFG-SG 247
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N D P LI+ G K QV CG HT++ + ++S+
Sbjct: 248 GFG-----QLGHNSLKDEHHPRLIAELW--GSKVS---QVTCGRHHTLVFEESSKLIYSF 297
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 308
G G G LG G+ + P VL P EF ++L TG
Sbjct: 298 GCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLITG 336
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 50 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-P 108
P+ V+++ACG +H +AL + G+ + WG N +GQLGL ++ + P
Sbjct: 108 PLKSLENRQVIQIACGDQHSMALSNDGQLFV--------WGENTHGQLGLRKEQAGTQSP 159
Query: 109 KIIETFNQDSPWAVYEVTCGSFHTALLT 136
+ +++ + P V +++ G H+ +L+
Sbjct: 160 QHLQSLCE-IP--VAQISAGGNHSFVLS 184
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 216 (81.1 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 62/158 (39%), Positives = 85/158 (53%)
Query: 70 VALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
+A +SAGE + + YSWG N GQLGLG ES+ P +IE + V V
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---VEFVA 249
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 186
CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y + +
Sbjct: 250 CGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-RVTQI 300
Query: 187 DCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNE 223
CG +HT + VS G V+S+G K G N TR++
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKD-GQLGNGG-TRDQ 336
Score = 175 (66.7 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/171 (30%), Positives = 81/171 (47%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 180
+ ++TCG +H+ L+ E W G +GQLG G S P+ V+ L
Sbjct: 140 IIQITCGDYHSLALSKGG------ELFAW--GQNLHGQLGVGRKFPSTTTPQIVEHLAG- 190
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
V L + G H+ +S +G+++SWG + C L E+ D P LI G
Sbjct: 191 VPLAQISAGEAHSMALSMSGNIYSWGKNE----CGQLGLGHTESKD--DPSLIEGLDNQK 244
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+F VACG +H+ L+T DG L+++G G+ G LG T + P +V
Sbjct: 245 VEF-----VACGGSHSALLTQDGL-LFTFGAGKHGQLGHNSTQNELRPCLV 289
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 46/134 (34%), Positives = 61/134 (45%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G SLA+ G L+ WG L G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQ-NL-HGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
+ G H +AL +G Y SWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNIY--------SWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 123 YEVTCGSFHTALLT 136
V CG H+ALLT
Sbjct: 246 EFVACGGSHSALLT 259
Score = 140 (54.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 49/167 (29%), Positives = 85/167 (50%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 117
++++ CG H +AL GE + +WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGELF--------AWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 178 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 223
Q V V+ CG H+++++ G ++++G K L N+ T+NE
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNE 283
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+++G E GQLG G T+S P ++ L Q V V+ CG H+++++ G ++++G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
K L N+ T+NE + P L++ G + Q+ACG HT+ D K++S
Sbjct: 271 KHGQLGHNS--TQNE----LRPCLVAELV--GYRV---TQIACGRWHTLAYVSDLGKVFS 319
Query: 269 WGRGRSGVLGTGKTIDFFAP 288
+G G+ G LG G T D P
Sbjct: 320 FGSGKDGQLGNGGTRDQLMP 339
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 70 VALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
V V+ G ++ +D + +++GA +GQLG ++ LRP ++ + V ++
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL---VGYRVTQIA 301
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 175
CG +HT +D+ ++FG G++GQLG+G T+ L+P VK
Sbjct: 302 CGRWHTLAYV-----SDL--GKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 168 (64.2 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 65/218 (29%), Positives = 100/218 (45%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G SLA+ + G ++ WG G F +S FTP + + +++V+CG
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG-AGSEGQLGIGEFKEIS-FTPKKIMTLNDIKIIQVSCGH 137
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAVYEV 125
H +AL +D +SWG N++GQLGLG S+ P+ + + + P A +V
Sbjct: 138 YHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA--QV 186
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVKELPQ 179
G H+ L S+C T FG G N GQL G + P V L
Sbjct: 187 AAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCP 215
+ +V + CG HT+V++ G V+++G + LG P
Sbjct: 236 -LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSP 272
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 39 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
G S +P V G + +VA G H AL G ++ WG+N+ GQL
Sbjct: 163 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSF--------GWGSNSAGQLA 214
Query: 99 LGDRESRLRP-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 157
L R ++ K + + VY ++CG HTA+LT + +TFG +
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVY-ISCGDAHTAVLTQ--------DGKVFTFGDNRS 265
Query: 158 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 206
GQLG+ T P+ V+ + V +DCG +HT + V + G V S+G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGLVS--QIDCGSYHTLAYVHTTGQVVSFG 313
Score = 148 (57.2 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 180
+ +V+CG +H+ L+ +S +++G +GQLG G S P++V+ L +
Sbjct: 130 IIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EG 180
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
+ L V G H+ +S G + WG L + RN + P+ + G
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPVQSNKPLSVGALKNLG 237
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
V ++CG AHT ++T DG K++++G RSG LG T + P +V
Sbjct: 238 V-----VYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEKRGPQLV 282
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 56/200 (28%), Positives = 84/200 (42%)
Query: 88 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 147
S G N+ GQLG R R ++ E V V+CG H+ + H+ R
Sbjct: 46 SCGDNSRGQLG---RRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRV------ 96
Query: 148 MCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
W G G GQLG G + + P+++ L + ++ V CG +H+ +S V+SWG
Sbjct: 97 FAW--GAGSEGQLGIGEFKEISFTPKKIMTLND-IKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 207 MEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
G LGL E SP + G QVA G AH+ ++ G
Sbjct: 154 KNSHGQLGL-------GKEFPSQASPQRV--RSLEGIPL---AQVAAGGAHSFALSLCGT 201
Query: 265 KLWSWGRGRSGVLG-TGKTI 283
+ WG +G L +G+ +
Sbjct: 202 S-FGWGSNSAGQLALSGRNV 220
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V AGG S A+ G + WG+ + G V S P V VV ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG H L G+ + ++G N +GQLG + P+++E + V
Sbjct: 243 CGDAHTAVLTQDGKVF--------TFGDNRSGQLGYSPTPEKRGPQLVERIDG----LVS 290
Query: 124 EVTCGSFHTALLTH 137
++ CGS+HT H
Sbjct: 291 QIDCGSYHTLAYVH 304
Score = 119 (46.9 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 106
P P+ V V+CG EH +A+ +KG ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVC-----HKGR---VFAWGAGSEGQLGIGEFKEISF 117
Query: 107 RPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
PK I T N + +V+CG +H+ L+
Sbjct: 118 TPKKIMTLNDIK---IIQVSCGHYHSLALS 144
Score = 77 (32.2 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 147 SMCWT-FGLGEN--GQL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
S+C T FG G N GQL G + P V L + +V + CG HT+V++ G
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKN-LGVVYISCGDAHTAVLTQDG 255
Query: 201 DVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
V+++G + LG P + + I L+S Q+ CG+ HT+
Sbjct: 256 KVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-LVS-------------QIDCGSYHTLA 301
Query: 259 VTDDGYKLWSWGRGRS 274
++ S+G G S
Sbjct: 302 YVHTTGQVVSFGHGPS 317
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 216 (81.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 66/213 (30%), Positives = 102/213 (47%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG ++R RP+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKARKRPEHVGALDAQN---IVAVSCGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG GT + VP +K L + + +V V CG +H+ +S
Sbjct: 100 NDKGQVYAW--GLATDGQLGLPGTEECIRVPRNIKSLSE-IQIVQVACGYYHSLALSKGS 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
+V+SWG K G LGL + + I +L G F Q+A G AH+ +
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLL-------GIPF---AQIAAGGAHSFV 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDDNDRYVPTLL 236
Score = 180 (68.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 51/151 (33%), Positives = 71/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ V + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---VVHICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + + CG HT+ V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGTTSNRKSPFTVKGN 344
Score = 131 (51.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F + +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR---IRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH + PE V L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGHEKARKR--PEHVGALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 202 VWSWGM--EKGLGL 213
V++WG+ + LGL
Sbjct: 105 VYAWGLATDGQLGL 118
Score = 124 (48.7 bits), Expect = 8.8e-12, Sum P(3) = 8.8e-12
Identities = 45/152 (29%), Positives = 67/152 (44%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAG- 269
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N I+P + G Q+ CG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSLV---TQITCGRQHTTAFVPSSGRIYSF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEE 299
G G +G LGTG T + +P V W P + +
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQ 351
Score = 122 (48.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 36/134 (26%), Positives = 51/134 (38%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ ++ WG G+ +P + G ++
Sbjct: 138 QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLLGIPFAQI 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---V 244
Query: 123 YEVTCGSFHTALLT 136
+ CG HTA LT
Sbjct: 245 VHICCGEDHTAALT 258
Score = 118 (46.6 bits), Expect = 8.8e-12, Sum P(3) = 8.8e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I +V G +LA+++ G ++ WG G + P + +V+VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIR--VPRNIKSLSEIQIVQVA 143
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAV 122
CG H +AL KG ++ +SWG N GQLGLG + + + P +I++ P+A
Sbjct: 144 CGYYHSLALS------KGSEV--FSWGQNKYGQLGLGYEYKKQNSPHVIKSL-LGIPFA- 193
Query: 123 YEVTCGSFHTALLT 136
++ G H+ +LT
Sbjct: 194 -QIAAGGAHSFVLT 206
Score = 106 (42.4 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
P V +V V+CG H +AL G+ Y +WG +GQLGL E +R
Sbjct: 75 PEHVGALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLATDGQLGLPGTEECIR 126
Query: 108 -PKIIETFNQDSPWAVYEVTCGSFHTALLT 136
P+ I++ ++ + +V CG +H+ L+
Sbjct: 127 VPRNIKSLSEIQ---IVQVACGYYHSLALS 153
Score = 82 (33.9 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 30/113 (26%), Positives = 43/113 (38%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WGN GG P F + V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
C G N+ GQLG ++R RP+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKARKRPEHVGALDAQN---IVAVSCGEAHTLALNDK 102
Score = 46 (21.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISL 372
+KL ++ L V+E + S+L +F K +D+ + L
Sbjct: 534 LKLEKAPLKVLENWWSVLEPPLFLKIVELYKDVVVHL 570
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 219 (82.2 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 69 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 184 (69.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 29 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 77
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 78 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 134
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 153 (58.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 6 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 61 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 178 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 206
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 43 (20.2 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 344 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 402
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 403 YRNMLAGVKDKLMKRRIQEIVNECL 427
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 169 (64.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 67/217 (30%), Positives = 96/217 (44%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
ED Y+ G N GQLG S+ P I Q + V CG H+ L+
Sbjct: 51 EDGEVYTCGLNTKGQLGHESEGSKPEP-IGALAGQH----IVHVACGESHSVALS----- 100
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
D + W G G +GQLG T + A+ VP +K+L Q L + CG +H +++ G
Sbjct: 101 -DQGQVFSW--GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTIL-QISCGNWHCLALAADG 156
Query: 201 DVWSWGMEK----GLGL-CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
++WG GLG CP+ AS R ++ D I P+ QVA G A
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PL---------------AQVAAGGA 200
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
H+ ++ G ++ WG+ SG LG D +P V
Sbjct: 201 HSFALSLSG-AVFGWGKNSSGQLGLSDERDRESPCHV 236
Score = 157 (60.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N++GQLGL D R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 206 G 206
G
Sbjct: 320 G 320
Score = 138 (53.6 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVACG 65
V GG S+ + G ++ C L +T+G S + P P+ G +V VACG
Sbjct: 39 VACGGNHSVFLLEDGEVY---TCGL---NTKGQLGHESEGSKPEPIGALAGQHIVHVACG 92
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYE 124
H VAL G+ + SWGA ++GQLGL E + P++I+ NQ + + +
Sbjct: 93 ESHSVALSDQGQVF--------SWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQT---ILQ 141
Query: 125 VTCGSFHTALL 135
++CG++H L
Sbjct: 142 ISCGNWHCLAL 152
Score = 128 (50.1 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G+N GQLG + P VK L +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK-VVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G C L + D ++P + G + Q+ACG HT+ ++++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLEL--MGSEVS---QIACGRHHTLAFVPSSGMIYAF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G G LGTG T + P+ V
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPV 341
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 84 LVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 142
++C WG ++ GQ G+G + P+ + F D V EV CG H+ L
Sbjct: 1 MLC--WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRN--VKEVACGGNHSVFLLE----- 51
Query: 143 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 202
+ +T GL GQLGH + S PE + L ++V V CG H+ +S G V
Sbjct: 52 ---DGEVYTCGLNTKGQLGHESEGSK--PEPIGALAGQ-HIVHVACGESHSVALSDQGQV 105
Query: 203 WSWG 206
+SWG
Sbjct: 106 FSWG 109
Score = 122 (48.0 bits), Expect = 0.00062, P = 0.00062
Identities = 42/134 (31%), Positives = 62/134 (46%)
Query: 148 MCWTFGLGENGQLGHGTTQSALVPE-QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+CW G GQ G G+ ++PE QV + V CG H+ + G+V++ G
Sbjct: 2 LCW--GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 207 ME-KGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
+ KG L G PI ++G Q V VACG +H+V ++D G
Sbjct: 60 LNTKG-------QLGHESEGSKPEPIGALAG--------QHIVHVACGESHSVALSDQG- 103
Query: 265 KLWSWGRGRSGVLG 278
+++SWG G G LG
Sbjct: 104 QVFSWGAGSDGQLG 117
Score = 112 (44.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 61
I V G S+A+ + G ++ WG S + G + + P + + T+++
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWG----AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 120
++CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ + P
Sbjct: 142 ISCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GIPL 192
Query: 121 AVYEVTCGSFHTALLT 136
A +V G H+ L+
Sbjct: 193 A--QVAAGGAHSFALS 206
Score = 91 (37.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 32/91 (35%), Positives = 39/91 (42%)
Query: 48 PSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P P V+ F H V +VACG H V L+ GE Y C G N GQLG S+
Sbjct: 23 PEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLGHESEGSK 74
Query: 106 LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
P I Q + V CG H+ L+
Sbjct: 75 PEP-IGALAGQH----IVHVACGESHSVALS 100
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 213 (80.0 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 68/215 (31%), Positives = 102/215 (47%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLQGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 201 DVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 256
+V+ WG K GLG+ E SP LI G F +QVA G AH+
Sbjct: 157 EVFCWGQNKYGQLGLGI---------ECQKQTSPQLIKSL--LGIPF---MQVAAGGAHS 202
Query: 257 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++T G ++ WGR + G LG D + P ++
Sbjct: 203 FVLTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 189 (71.6 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 166 (63.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 61/213 (28%), Positives = 96/213 (45%)
Query: 80 KGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
K ++ C WG N GQLGLG + + + P++I++ P+ +V G H+ +LT
Sbjct: 154 KASEVFC--WGQNKYGQLGLGIECQKQTSPQLIKSL-LGIPFM--QVAAGGAHSFVLT-- 206
Query: 139 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 198
L + +G + GQLG VP +K L +V + CG HT+ ++
Sbjct: 207 ------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK-IVYICCGEDHTAALTK 259
Query: 199 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
G V+++G G G L N I+P + G Q+ACG HT
Sbjct: 260 EGGVFTFGAG-GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSA 308
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++S+G G +G LGTG T + +P V
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 144 (55.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 202 VWSWGMEKG--LGL 213
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 130 (50.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 39/134 (29%), Positives = 53/134 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IV 245
Query: 123 YEVTCGSFHTALLT 136
Y + CG HTA LT
Sbjct: 246 Y-ICCGEDHTAALT 258
Score = 46 (21.3 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 395
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 396 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 424
L LE +R N G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNERTGQLIQYDKFYIHEVQELID 626
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 209 (78.6 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 79/301 (26%), Positives = 128/301 (42%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDF---- 54
+++ V AG + +G L MW P T GG SL P V F
Sbjct: 338 TEVVQVSAGRTQKAGVTKSGRLIMW---EAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQ 394
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ V+CG L G + ++G+ +NG LG G+ +PKI+E
Sbjct: 395 SGVTIKHVSCGDLFTACLTDRG--------IIMTFGSGSNGCLGHGNFTDVSQPKIVEAL 446
Query: 115 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
+ + +V CG+ H +++ + E W G G+NG+LG GT + P+QV
Sbjct: 447 ---LGYEMVQVACGASHVLAVSNER------EVFAW--GRGDNGRLGLGTLECHNSPQQV 495
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPIL 232
P++ V CG+ + V++ + + G + LGL +S D +
Sbjct: 496 AVPPEHE-AQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEAT 554
Query: 233 ISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ P Q+PV A G AH+ VT G + +++G + G LGT + P +V
Sbjct: 555 VFTCAQSAPLNQEPVVCADIGTAHSAAVTASG-QCYTFGSNQHGQLGTNSCRNSRVPHLV 613
Query: 292 L 292
+
Sbjct: 614 V 614
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G LA+ N ++ WG D+ G +L +P V H +V
Sbjct: 450 EMVQVACGASHVLAVSNEREVFAWGR---GDNGRLGLGTLECHNSPQQVAVPPEHEAQRV 506
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---------ESRLRPKIIET 113
CG + + L T + L C G+N +LGL DR E ++ + T
Sbjct: 507 ICGIDSSMVL-----TVNNQILAC---GSNRCNKLGL-DRISSAEEPSPEDQVEEATVFT 557
Query: 114 FNQDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 170
Q +P V C G+ H+A +T C+TFG ++GQLG + +++ V
Sbjct: 558 CAQSAPLNQEPVVCADIGTAHSAAVT--------ASGQCYTFGSNQHGQLGTNSCRNSRV 609
Query: 171 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
P V L + + + V CG T + + G+V +WG
Sbjct: 610 PHLVVGL-RAMKVTVVACGDAFTVAIGADGEVCTWG 644
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 53/226 (23%), Positives = 89/226 (39%)
Query: 59 VVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V+ G E V A + ++WG +NG+LGLG E P+ + +
Sbjct: 442 IVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEH 501
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V CG + +LT + + C GL + + + V
Sbjct: 502 E---AQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTC 558
Query: 178 PQYVYL-----VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
Q L V D G H++ V+++G +++G + + L N ++ P L
Sbjct: 559 AQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQ------HGQLGTNSCRNSRVPHL 612
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
+ G + VACG A TV + DG ++ +WG+G G LG
Sbjct: 613 VVGL-----RAMKVTVVACGDAFTVAIGADG-EVCTWGKGARGRLG 652
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 214 (80.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 88/296 (29%), Positives = 121/296 (40%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V+ GG SL + + G LW WG S G + S P PV G+ A G+
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNA---SGQLGDGTTTPSAIPVPVVGGAGNWRT-TATGT 458
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP---WAVY 123
H VA+ + G ++WG N++GQLG+G + P+ I N S W
Sbjct: 459 AHSVAVRADG--------TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTA- 509
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQ-VKELPQYV 181
V G H+ L + W++G GQLG GT T + P Q V P
Sbjct: 510 -VAGGGAHSLGLK--------ADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNF 560
Query: 182 --YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNG 237
V+V G + + + G +W+WG LG P A LT A P ++
Sbjct: 561 DRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDP-AMLT--PATQRNVPAQLAVAS 617
Query: 238 PHGPKFQDP-VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
P F V +A G H + + DG LW+WG G LG G T F P V+
Sbjct: 618 PPSTAFNSSWVAIAAGQDHGLSLQADG-TLWAWGANSVGQLGNGVTTATFTPVQVI 672
Score = 203 (76.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 81/304 (26%), Positives = 127/304 (41%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCP---LPDSS-TEGGFSLVSSFTPSPVWDFHGHTVVK 61
+V GG SL + G LW WG+ L D + T + V T +P +F + V
Sbjct: 509 AVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNP-GNFDRNWVA- 566
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VA G +AL + G ++WG +N L LG + L P N + A
Sbjct: 567 VAAGGVFSLALQADG--------TIWTWG--DNSLLQLGTDPAMLTPATQR--NVPAQLA 614
Query: 122 VYEVTCGSFHTALLTHRKRPNDML----ESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V +F+++ + + L + W +G GQLG+G T + P QV
Sbjct: 615 VASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA 674
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILI 233
Y VS+ G H+ S G +W+WG + G G P + N + ++
Sbjct: 675 EGVPY-VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARIL 733
Query: 234 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 293
+ N P D + G +H+ + +G LW+WG+ SG LG G T + P +L
Sbjct: 734 TSN-PVSAA-DDWLVATAGGSHSAALKSNG-TLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Query: 294 PPLT 297
P ++
Sbjct: 791 PRIS 794
Score = 134 (52.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/148 (31%), Positives = 63/148 (42%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W G + GQLG GT + P QV + +V G H+ + + G +W+WG
Sbjct: 54 WAAGSNQFGQLGDGTGINRTSPVQVPGTWK-----TVAAGTTHSLGIKADGSLWAWGSNL 108
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G + A + SPI I G G D V V+ G + + DG LWSW
Sbjct: 109 -FGQLGQPLVNGQLATNKFSPIRI-GTG------NDWVAVSAGELTSFGLKGDG-TLWSW 159
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLT 297
G G LG G T+ P V+ PL+
Sbjct: 160 GNNLFGELGDGTTVSRPQPVQVVADPLS 187
Score = 126 (49.4 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 207
W +G GQLG G T P +K + ++ G H+ + + G +WSWG
Sbjct: 211 WAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW-TAISAGEMHSVALKADGSLWSWGQNL 269
Query: 208 --EKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
E G G+ P A++T +P + G G D V +A GA HTV + +G
Sbjct: 270 FGELGNGVALPGANVT--------TPTRV-GTG------SDWVAIAAGALHTVALHRNG- 313
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+ +WG G +G G + P +++ P
Sbjct: 314 TVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Score = 126 (49.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
W++G G+LG GTT S P QV P V+V G H + + G +W+WG
Sbjct: 157 WSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG-- 214
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
A+LT + G + IL + +D ++ G H+V + DG LWS
Sbjct: 215 --------ANLT-GQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADG-SLWS 264
Query: 269 WGRGRSGVLGTG 280
WG+ G LG G
Sbjct: 265 WGQNLFGELGNG 276
Score = 122 (48.0 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 52/227 (22%), Positives = 87/227 (38%)
Query: 70 VALVSAGETYKG--EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ + GE D ++WGAN GQLG G P ++ D W ++
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA--ISA 248
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQYVYLV 184
G H+ L + W++G G+LG+G + P +V +V
Sbjct: 249 GEMHSVALK--------ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV--- 297
Query: 185 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 244
++ G HT + G V +WG + R+ ++P+ + N
Sbjct: 298 AIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN-------- 349
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
V +A G + V +G ++ WG +G LG G AP ++
Sbjct: 350 --VAIAAGTGVSFSVLANG-TVFGWGGNGAGQLGNGTFGAVTAPTVL 393
Score = 87 (35.7 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+V AG SL I G+LW WG+ L G + + F+P + G+ V V
Sbjct: 84 TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLA-TNKFSPIRIGT--GNDWVAV 140
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 108
+ G L S G KG+ + +SWG N G+LG G SR +P
Sbjct: 141 SAGE-----LTSFG--LKGDGTL-WSWGNNLFGELGDGTTVSRPQP 178
Score = 62 (26.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/97 (25%), Positives = 37/97 (38%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S + V AGG L + + G LW G+ G + S W
Sbjct: 32 SAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWK-------T 84
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
VA G+ H + + + G + +WG+N GQLG
Sbjct: 85 VAAGTTHSLGIKADGSLW--------AWGSNLFGQLG 113
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 214 (80.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 88/296 (29%), Positives = 121/296 (40%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V+ GG SL + + G LW WG S G + S P PV G+ A G+
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNA---SGQLGDGTTTPSAIPVPVVGGAGNWRT-TATGT 458
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP---WAVY 123
H VA+ + G ++WG N++GQLG+G + P+ I N S W
Sbjct: 459 AHSVAVRADG--------TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTA- 509
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQ-VKELPQYV 181
V G H+ L + W++G GQLG GT T + P Q V P
Sbjct: 510 -VAGGGAHSLGLK--------ADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNF 560
Query: 182 --YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNG 237
V+V G + + + G +W+WG LG P A LT A P ++
Sbjct: 561 DRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDP-AMLT--PATQRNVPAQLAVAS 617
Query: 238 PHGPKFQDP-VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
P F V +A G H + + DG LW+WG G LG G T F P V+
Sbjct: 618 PPSTAFNSSWVAIAAGQDHGLSLQADG-TLWAWGANSVGQLGNGVTTATFTPVQVI 672
Score = 203 (76.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 81/304 (26%), Positives = 127/304 (41%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCP---LPDSS-TEGGFSLVSSFTPSPVWDFHGHTVVK 61
+V GG SL + G LW WG+ L D + T + V T +P +F + V
Sbjct: 509 AVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNP-GNFDRNWVA- 566
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VA G +AL + G ++WG +N L LG + L P N + A
Sbjct: 567 VAAGGVFSLALQADG--------TIWTWG--DNSLLQLGTDPAMLTPATQR--NVPAQLA 614
Query: 122 VYEVTCGSFHTALLTHRKRPNDML----ESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V +F+++ + + L + W +G GQLG+G T + P QV
Sbjct: 615 VASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA 674
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILI 233
Y VS+ G H+ S G +W+WG + G G P + N + ++
Sbjct: 675 EGVPY-VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARIL 733
Query: 234 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 293
+ N P D + G +H+ + +G LW+WG+ SG LG G T + P +L
Sbjct: 734 TSN-PVSAA-DDWLVATAGGSHSAALKSNG-TLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Query: 294 PPLT 297
P ++
Sbjct: 791 PRIS 794
Score = 134 (52.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/148 (31%), Positives = 63/148 (42%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W G + GQLG GT + P QV + +V G H+ + + G +W+WG
Sbjct: 54 WAAGSNQFGQLGDGTGINRTSPVQVPGTWK-----TVAAGTTHSLGIKADGSLWAWGSNL 108
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G + A + SPI I G G D V V+ G + + DG LWSW
Sbjct: 109 -FGQLGQPLVNGQLATNKFSPIRI-GTG------NDWVAVSAGELTSFGLKGDG-TLWSW 159
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLT 297
G G LG G T+ P V+ PL+
Sbjct: 160 GNNLFGELGDGTTVSRPQPVQVVADPLS 187
Score = 126 (49.4 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 207
W +G GQLG G T P +K + ++ G H+ + + G +WSWG
Sbjct: 211 WAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW-TAISAGEMHSVALKADGSLWSWGQNL 269
Query: 208 --EKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
E G G+ P A++T +P + G G D V +A GA HTV + +G
Sbjct: 270 FGELGNGVALPGANVT--------TPTRV-GTG------SDWVAIAAGALHTVALHRNG- 313
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+ +WG G +G G + P +++ P
Sbjct: 314 TVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Score = 126 (49.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
W++G G+LG GTT S P QV P V+V G H + + G +W+WG
Sbjct: 157 WSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG-- 214
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
A+LT + G + IL + +D ++ G H+V + DG LWS
Sbjct: 215 --------ANLT-GQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADG-SLWS 264
Query: 269 WGRGRSGVLGTG 280
WG+ G LG G
Sbjct: 265 WGQNLFGELGNG 276
Score = 122 (48.0 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 52/227 (22%), Positives = 87/227 (38%)
Query: 70 VALVSAGETYKG--EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
VA+ + GE D ++WGAN GQLG G P ++ D W ++
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA--ISA 248
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQYVYLV 184
G H+ L + W++G G+LG+G + P +V +V
Sbjct: 249 GEMHSVALK--------ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV--- 297
Query: 185 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 244
++ G HT + G V +WG + R+ ++P+ + N
Sbjct: 298 AIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN-------- 349
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
V +A G + V +G ++ WG +G LG G AP ++
Sbjct: 350 --VAIAAGTGVSFSVLANG-TVFGWGGNGAGQLGNGTFGAVTAPTVL 393
Score = 87 (35.7 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+V AG SL I G+LW WG+ L G + + F+P + G+ V V
Sbjct: 84 TVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLA-TNKFSPIRIGT--GNDWVAV 140
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 108
+ G L S G KG+ + +SWG N G+LG G SR +P
Sbjct: 141 SAGE-----LTSFG--LKGDGTL-WSWGNNLFGELGDGTTVSRPQP 178
Score = 62 (26.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/97 (25%), Positives = 37/97 (38%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S + V AGG L + + G LW G+ G + S W
Sbjct: 32 SAVPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWK-------T 84
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
VA G+ H + + + G + +WG+N GQLG
Sbjct: 85 VAAGTTHSLGIKADGSLW--------AWGSNLFGQLG 113
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 198 (74.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 64/214 (29%), Positives = 96/214 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
Q+ + G S+A+ N G L++WG L + +P + G V ++
Sbjct: 117 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRK--EQAGTQSPQHLQSLCGIPVAQI 174
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
+ G H L +G V + WG+N+ GQLGLGD R P I+++ +
Sbjct: 175 SAGGNHSFVLSLSG--------VVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK---T 223
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
++CG HTA L+ +TFG G GQLGH + + P V EL +
Sbjct: 224 VSISCGGEHTATLSKG--------GTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WGS 273
Query: 183 LVS-VDCGLFHTSVVS-SAGDVWSWG--MEKGLG 212
VS V CG HT V S+ ++S+G M+ LG
Sbjct: 274 KVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLG 307
Score = 178 (67.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 55/159 (34%), Positives = 74/159 (46%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG G T +P VK L VS+ CG HT+ +S G V+++G
Sbjct: 191 FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK-TVSISCGGEHTATLSKGGTVFTFG-SG 248
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N D P L++ G K QV CG HT++ D +++S+
Sbjct: 249 GFG-----QLGHNSLKDEHHPRLVAELW--GSKVS---QVTCGRHHTLVFEDSSNQIYSF 298
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 308
G G G LG G+ + P VL P EF ++L G
Sbjct: 299 GCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAG 337
Score = 80 (33.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 23/88 (26%), Positives = 45/88 (51%)
Query: 50 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-P 108
P+ V+++ACG +H +AL + G+ + WG N GQLGL ++ + P
Sbjct: 109 PLKGLENRQVIQIACGDQHSMALTNDGQLFV--------WGENALGQLGLRKEQAGTQSP 160
Query: 109 KIIETFNQDSPWAVYEVTCGSFHTALLT 136
+ +++ P V +++ G H+ +L+
Sbjct: 161 QHLQSLC-GIP--VAQISAGGNHSFVLS 185
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 210 (79.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 66/213 (30%), Positives = 101/213 (47%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG +SR +P+ + + + + V CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVACGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLQGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
+V+ WG K G LGL + + I +L G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLL-------GIPF---MQVAAGGAHSFV 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 190 (71.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 54/151 (35%), Positives = 72/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + V CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 171 (65.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 63/213 (29%), Positives = 96/213 (45%)
Query: 80 KGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
K ++ C WG N GQLGLG D + + P++I++ P+ +V G H+ +LT
Sbjct: 154 KASEVFC--WGQNKYGQLGLGIDCQKQTSPQLIKSL-LGIPFM--QVAAGGAHSFVLT-- 206
Query: 139 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 198
L + +G + GQLG VP +K L +V + CG HT+ ++
Sbjct: 207 ------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK-IVYICCGEDHTAALTK 259
Query: 199 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
G V+++G G G L N I+P + G QVACG HT
Sbjct: 260 EGGVFTFGAG-GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQVACGRQHTSA 308
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++S+G G +G LGTG T + +P V
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 142 (55.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVACGEAHTLALNDKGQ 104
Query: 202 VWSWGMEKG--LGL 213
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 130 (50.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 39/134 (29%), Positives = 53/134 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IV 245
Query: 123 YEVTCGSFHTALLT 136
Y + CG HTA LT
Sbjct: 246 Y-ICCGEDHTAALT 258
Score = 123 (48.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 39/134 (29%), Positives = 63/134 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I +V G +LA+++ G ++ WG +G + P + +V+VA
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIR--VPRNIKSLSDIQIVQVA 143
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAV 122
CG H +AL A E + C WG N GQLGLG D + + P++I++ P+
Sbjct: 144 CGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCQKQTSPQLIKSL-LGIPFM- 193
Query: 123 YEVTCGSFHTALLT 136
+V G H+ +LT
Sbjct: 194 -QVAAGGAHSFVLT 206
Score = 46 (21.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 395
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 396 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 424
L LE +R N G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNEKTGQLIQYDKFYIHEVQELID 626
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 208 (78.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 68/213 (31%), Positives = 105/213 (49%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
+V+ WG K G LGL + + +A SP LI G F +Q+A G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGLGIDC---KKQA----SPQLIKSL--LGIPF---MQIAAGGAHSFV 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 188 (71.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVY-ICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 143 (55.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 202 VWSWGMEKG--LGL 213
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/134 (28%), Positives = 53/134 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G +++
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQI 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IV 245
Query: 123 YEVTCGSFHTALLT 136
Y + CG HTA LT
Sbjct: 246 Y-ICCGEDHTAALT 258
Score = 126 (49.4 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 47/156 (30%), Positives = 68/156 (43%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N I+P + G Q+ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSAFVPSSGRIYSF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEEFKQD 303
G G +G LGTG T + +P V W P + D
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPD 355
Score = 121 (47.7 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG DS +G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + C WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P+ ++ G H+ +LT
Sbjct: 191 PFM--QIAAGGAHSFVLT 206
Score = 109 (43.4 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLLGSEECIR 126
Query: 108 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 150
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 47 (21.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 395
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 396 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 424
L LE +R N +G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNEKSGQIIQYDKFYIHEVQELID 626
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 220 (82.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 69 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 58 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4133
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4134 EE---VVQMSCGFKHSAVVT--------ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4182
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 206
L Y + V CGL HT VS+ G VW++G
Sbjct: 4183 LEGY-QIGQVACGLNHTVAVSTDGSMVWAFG 4212
Score = 184 (69.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 29 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 77
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 78 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 134
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 161 (61.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTVAVS-----TD--G 4205
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG-IGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 207 M--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
++ +GL P RN P+L G +D +A GA HT+ ++ G
Sbjct: 4265 QVSDRLIGL-PEGR-ARNHNRPQQVPVL------SGVFIED---IAVGAEHTLALSSTG- 4312
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++WG G LG G T P ++
Sbjct: 4313 DVYAWGSNSEGQLGLGHTNHVREPTLI 4339
Score = 153 (58.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 6 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 61 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 178 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 206
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 151 (58.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV++ G ++++G +
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4162
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL ++ E A+ I QVACG HTV V+ DG +W
Sbjct: 4163 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTVAVSTDGSMVW 4209
Query: 268 SWGRGRSGVLGTGKT 282
++G G G LG G +
Sbjct: 4210 AFGDGDYGKLGLGNS 4224
Score = 122 (48.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C V AG S A+ G L+ WG D G S P+ V D V +V+
Sbjct: 514 VC-VSAGYRHSAAVTEDGELYTWGE---GDFGRLGHGDSNSRNIPTLVKDISN--VGEVS 567
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS H +AL G T +S+G +NG+LG GD +PK+IE +
Sbjct: 568 CGSSHTIALSKDGRTV-------WSFGGGDNGKLGHGDTNRVYKPKVIEALQG---MFIR 617
Query: 124 EVTCGSFHTALLT 136
+V GS + LT
Sbjct: 618 KVCAGSQSSLALT 630
Score = 118 (46.6 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 40/137 (29%), Positives = 59/137 (43%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 59
+ ++ S K +LA G ++ WG+ D G G S + G V
Sbjct: 457 IKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 514 VCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN--- 562
Query: 120 WAVYEVTCGSFHTALLT 136
V EV+CGS HT L+
Sbjct: 563 --VGEVSCGSSHTIALS 577
Score = 105 (42.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/143 (24%), Positives = 63/143 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V AG SLA+ + G ++ WG C + G S ++ P + + +V ++
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDIS 671
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAV 122
G H +AL E Y +WG N+ GQ G G+ + +PK + + S +
Sbjct: 672 IGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVS---I 720
Query: 123 YEVTCGSFHTALLTHRKRPNDML 145
+++ G+ H+ T R ++
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVV 743
Score = 104 (41.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 1 MSQICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
+S + V G ++A+ G +W +G D+ G + P + G +
Sbjct: 560 ISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDS 118
KV GS+ +AL S G+ Y +WG LG G E+ LRPK+IE +
Sbjct: 617 RKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGCGSSEATALRPKLIEEL---A 663
Query: 119 PWAVYEVTCGSFHTALLTH 137
+ +++ G H L+H
Sbjct: 664 ATRIVDISIGDSHCLALSH 682
Score = 87 (35.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 140 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3987 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPVAA---PSFSQAQQVVCGQNCTFVI 4042
Query: 197 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 255
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4043 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4093
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ +T+ G +++SWG G G LG G +
Sbjct: 4094 SMALTESG-EVFSWGDGDYGKLGHGNS 4119
Score = 54 (24.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 13/70 (18%), Positives = 30/70 (42%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++I + G LA+ + ++ WGN + ++ P V G ++ +
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGVSIQQ 722
Query: 62 VACGSEHVVA 71
++ G+ H +A
Sbjct: 723 ISAGTSHSLA 732
Score = 41 (19.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 404 RNMLAGVKDKLMKRRIQEIVNECL 427
RN+L + D + IQE+V E L
Sbjct: 823 RNLLFRLMDSSVPDEIQEVVIETL 846
Score = 38 (18.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 311 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 369
+ E+K + +E+ DE L +++ ++E + HGS GK + A +
Sbjct: 2010 EQEMKLQKQGESEDEDENLPIQEVSFDPEKAQCCIVENGQILTHGS-GGKGYGLASTGVT 2068
Query: 370 ISLKDMGFFDITKE 383
F+ I KE
Sbjct: 2069 SGCYQWKFY-IVKE 2081
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 207 (77.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 66/211 (31%), Positives = 105/211 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH----RKRPN 142
+++G+ G LG G ES +PK +E+ + V V+CG +HTA + RK N
Sbjct: 417 FTYGSGTFGVLGHGSLESVTKPKEVESLRR---MKVISVSCGPWHTAAIVETANDRKFYN 473
Query: 143 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 202
+T+G G+ G+LGH ++ LVP V EL + + + V CG T +S +G V
Sbjct: 474 AKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDF-IKVSCGWTLTVALSISGTV 532
Query: 203 WSWGME-KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 260
++ G G LG CP A +++ +L GN Q +A G+ H ++T
Sbjct: 533 YTMGSSIHGQLG-CPRAK------DKSVNVVL--GNLTR----QFVKDIASGSHHVAVLT 579
Query: 261 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G +++WG+G +G LG G D +P +V
Sbjct: 580 SFG-NVYTWGKGMNGQLGLGDVRDRNSPVLV 609
Score = 206 (77.6 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 70/222 (31%), Positives = 106/222 (47%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSST--EGGFSLVSSFTPSPVWDFHGH--TVVK 61
SV + A+ +G L++WG D T + G S F + D G TV+
Sbjct: 348 SVACSDHQTCAVTESGELYLWGI----DGGTIEQSG----SQFLTRKISDVLGGSLTVLS 399
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VACG+ H + S+G+ + ++G+ G LG G ES +PK +E+ +
Sbjct: 400 VACGAWHTAIVTSSGQLF--------TYGSGTFGVLGHGSLESVTKPKEVESLRR---MK 448
Query: 122 VYEVTCGSFHTALLTH----RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V V+CG +HTA + RK N +T+G G+ G+LGH ++ LVP V EL
Sbjct: 449 VISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTEL 508
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME-KG-LGLCPNA 217
+ + + V CG T +S +G V++ G G LG CP A
Sbjct: 509 IDHDF-IKVSCGWTLTVALSISGTVYTMGSSIHGQLG-CPRA 548
Score = 138 (53.6 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 46/136 (33%), Positives = 69/136 (50%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E CW G G +G+LG P++V+ L V + SV C T V+ +G+++ W
Sbjct: 312 EVFCW--GNGNSGKLGLKVNIDIDHPKRVESLED-VAVRSVACSDHQTCAVTESGELYLW 368
Query: 206 GMEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
G++ G + + LTR IS +L G+ + VACGA HT +VT G
Sbjct: 369 GIDGGTIEQSGSQFLTRK-----ISDVL-GGS-------LTVLSVACGAWHTAIVTSSG- 414
Query: 265 KLWSWGRGRSGVLGTG 280
+L+++G G GVLG G
Sbjct: 415 QLFTYGSGTFGVLGHG 430
Score = 47 (21.6 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 317 KDLEGAEERDEKLSSAMEEMKLLQSKL 343
K E A+E EK +A E +K L SKL
Sbjct: 832 KTWEVAKEEAEKSKAAKEIIKALASKL 858
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 379 DITKEWENMLESADRSKLVR 398
++ K WE E A++SK +
Sbjct: 829 ELDKTWEVAKEEAEKSKAAK 848
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 220 (82.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 69 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 58 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4128
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4129 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4177
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 206
L Y + V CGL HT VS+ G VW++G
Sbjct: 4178 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4207
Score = 184 (69.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 29 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 77
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 78 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 134
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 172 (65.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4151 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4200
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4259
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 4260 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 4307
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAIV 291
++WG G LG G T P +V
Sbjct: 4308 YAWGSNSEGQLGLGHTNHVREPTLV 4332
Score = 153 (58.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 6 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 61 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 178 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 206
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 150 (57.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4099 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4157
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4158 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4204
Query: 268 SWGRGRSGVLGTGKT 282
++G G G LG G +
Sbjct: 4205 AFGDGDYGKLGLGNS 4219
Score = 122 (48.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C V AG S A+ G L+ WG D G S P+ V D V +V+
Sbjct: 514 VC-VSAGYRHSAAVTEDGELYTWGE---GDFGRLGHGDSNSRNIPTLVKDISN--VGEVS 567
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS H +AL G T +S+G +NG+LG GD +PK+IE +
Sbjct: 568 CGSSHTIALSKDGRTV-------WSFGGGDNGKLGHGDTNRVYKPKVIEALQG---MFIR 617
Query: 124 EVTCGSFHTALLT 136
+V GS + LT
Sbjct: 618 KVCAGSQSSLALT 630
Score = 118 (46.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 40/137 (29%), Positives = 59/137 (43%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 59
+ ++ S K +LA G ++ WG+ D G G S + G V
Sbjct: 457 IKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 514 VCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN--- 562
Query: 120 WAVYEVTCGSFHTALLT 136
V EV+CGS HT L+
Sbjct: 563 --VGEVSCGSSHTIALS 577
Score = 105 (42.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 35/143 (24%), Positives = 63/143 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V AG SLA+ + G ++ WG C + G S ++ P + + +V ++
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDIS 671
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAV 122
G H +AL E Y +WG N+ GQ G G+ + +PK + + A+
Sbjct: 672 IGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---AI 720
Query: 123 YEVTCGSFHTALLTHRKRPNDML 145
+++ G+ H+ T R ++
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVV 743
Score = 104 (41.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 1 MSQICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
+S + V G ++A+ G +W +G D+ G + P + G +
Sbjct: 560 ISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDS 118
KV GS+ +AL S G+ Y +WG LG G E+ LRPK+IE +
Sbjct: 617 RKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGCGSSEATALRPKLIEEL---A 663
Query: 119 PWAVYEVTCGSFHTALLTH 137
+ +++ G H L+H
Sbjct: 664 ATRIVDISIGDSHCLALSH 682
Score = 88 (36.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 140 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3982 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4037
Query: 197 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 255
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4038 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4088
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ +T+ G +++SWG G G LG G +
Sbjct: 4089 SMALTESG-EVFSWGDGDYGKLGHGNS 4114
Score = 53 (23.7 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++I + G LA+ + ++ WGN + ++ P V G + +
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGIAIQQ 722
Query: 62 VACGSEHVVA 71
++ G+ H +A
Sbjct: 723 ISAGTSHSLA 732
Score = 43 (20.2 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 344 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 402
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 403 YRNMLAGVKDKLMKRRIQEIVNECL 427
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 42 (19.8 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 311 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 369
+ EIK + EE DE L +++ ++E + HGS GK + A +
Sbjct: 2007 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGS-GGKGYGLASTGVT 2065
Query: 370 ISLKDMGFFDITKE 383
F+ I KE
Sbjct: 2066 SGCYQWKFY-IVKE 2078
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 220 (82.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 69 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 58 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4131
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4132 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4180
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 206
L Y + V CGL HT VS+ G VW++G
Sbjct: 4181 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4210
Score = 184 (69.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 29 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 77
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 78 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 134
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 172 (65.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4203
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 4263 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 4310
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAIV 291
++WG G LG G T P +V
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 153 (58.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 6 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 61 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 178 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 206
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 150 (57.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4160
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4161 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4207
Query: 268 SWGRGRSGVLGTGKT 282
++G G G LG G +
Sbjct: 4208 AFGDGDYGKLGLGNS 4222
Score = 122 (48.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C V AG S A+ G L+ WG D G S P+ V D V +V+
Sbjct: 514 VC-VSAGYRHSAAVTEDGELYTWGE---GDFGRLGHGDSNSRNIPTLVKDISN--VGEVS 567
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS H +AL G T +S+G +NG+LG GD +PK+IE +
Sbjct: 568 CGSSHTIALSKDGRTV-------WSFGGGDNGKLGHGDTNRVYKPKVIEALQG---MFIR 617
Query: 124 EVTCGSFHTALLT 136
+V GS + LT
Sbjct: 618 KVCAGSQSSLALT 630
Score = 118 (46.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 40/137 (29%), Positives = 59/137 (43%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 59
+ ++ S K +LA G ++ WG+ D G G S + G V
Sbjct: 457 IKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 514 VCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN--- 562
Query: 120 WAVYEVTCGSFHTALLT 136
V EV+CGS HT L+
Sbjct: 563 --VGEVSCGSSHTIALS 577
Score = 105 (42.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 35/143 (24%), Positives = 63/143 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V AG SLA+ + G ++ WG C + G S ++ P + + +V ++
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDIS 671
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAV 122
G H +AL E Y +WG N+ GQ G G+ + +PK + + A+
Sbjct: 672 IGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---AI 720
Query: 123 YEVTCGSFHTALLTHRKRPNDML 145
+++ G+ H+ T R ++
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVV 743
Score = 104 (41.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 1 MSQICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
+S + V G ++A+ G +W +G D+ G + P + G +
Sbjct: 560 ISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDS 118
KV GS+ +AL S G+ Y +WG LG G E+ LRPK+IE +
Sbjct: 617 RKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGCGSSEATALRPKLIEEL---A 663
Query: 119 PWAVYEVTCGSFHTALLTH 137
+ +++ G H L+H
Sbjct: 664 ATRIVDISIGDSHCLALSH 682
Score = 88 (36.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 140 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3985 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4040
Query: 197 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 255
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4041 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4091
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ +T+ G +++SWG G G LG G +
Sbjct: 4092 SMALTESG-EVFSWGDGDYGKLGHGNS 4117
Score = 53 (23.7 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++I + G LA+ + ++ WGN + ++ P V G + +
Sbjct: 665 TRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGIAIQQ 722
Query: 62 VACGSEHVVA 71
++ G+ H +A
Sbjct: 723 ISAGTSHSLA 732
Score = 43 (20.2 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 344 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 402
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 403 YRNMLAGVKDKLMKRRIQEIVNECL 427
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 42 (19.8 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 311 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 369
+ EIK + EE DE L +++ ++E + HGS GK + A +
Sbjct: 2008 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGS-GGKGYGLASTGVT 2066
Query: 370 ISLKDMGFFDITKE 383
F+ I KE
Sbjct: 2067 SGCYQWKFY-IVKE 2079
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 221 (82.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 68/217 (31%), Positives = 106/217 (48%)
Query: 69 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
V+ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---VSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 58 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4133
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4134 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4182
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 206
L Y + V CGL HT VS+ G VW++G
Sbjct: 4183 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4212
Score = 184 (69.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 29 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 77
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 78 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 134
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 172 (65.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 56/205 (27%), Positives = 98/205 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4205
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
SM W FG G+ G+LG G + + P+++ L + + V CG + ++ G V+++G
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
++ +GL P RN P+L G +D VA GA HT+ + +G +
Sbjct: 4265 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGAEHTLALASNG-DV 4312
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAIV 291
++WG G LG G T P +V
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 153 (58.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 6 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 61 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 178 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 206
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 150 (57.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4162
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4163 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4209
Query: 268 SWGRGRSGVLGTGKT 282
++G G G LG G +
Sbjct: 4210 AFGDGDYGKLGLGNS 4224
Score = 122 (48.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C V AG S A+ G L+ WG D G S P+ V D V +V+
Sbjct: 514 VC-VSAGYRHSAAVTEDGELYTWGE---GDFGRLGHGDSNSRNIPTLVKDISN--VGEVS 567
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CGS H +AL G T +S+G +NG+LG GD +PK+IE +
Sbjct: 568 CGSSHTIALSKDGRTV-------WSFGGGDNGKLGHGDTNRVYKPKVIEALQG---MFIR 617
Query: 124 EVTCGSFHTALLT 136
+V GS + LT
Sbjct: 618 KVCAGSQSSLALT 630
Score = 118 (46.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 40/137 (29%), Positives = 59/137 (43%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 59
+ ++ S K +LA G ++ WG+ D G G S + G V
Sbjct: 457 IKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 514 VCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN--- 562
Query: 120 WAVYEVTCGSFHTALLT 136
V EV+CGS HT L+
Sbjct: 563 --VGEVSCGSSHTIALS 577
Score = 106 (42.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 36/143 (25%), Positives = 63/143 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V AG SLA+ + G ++ WG C + G S ++ P + + +V V+
Sbjct: 616 IRKVCAGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDVS 671
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAV 122
G H +AL E Y +WG N+ GQ G G+ + +PK + + A+
Sbjct: 672 IGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---AI 720
Query: 123 YEVTCGSFHTALLTHRKRPNDML 145
+++ G+ H+ T R ++
Sbjct: 721 QQISAGTSHSLAWTALPRDRQVV 743
Score = 105 (42.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 1 MSQICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
+S + V G ++A+ G +W +G D+ G + P + G +
Sbjct: 560 ISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDS 118
KV GS+ +AL S G+ Y +WG LG G E+ LRPK+IE +
Sbjct: 617 RKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGCGSSEATALRPKLIEEL---A 663
Query: 119 PWAVYEVTCGSFHTALLTH 137
+ +V+ G H L+H
Sbjct: 664 ATRIVDVSIGDSHCLALSH 682
Score = 88 (36.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 140 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3987 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4042
Query: 197 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 255
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4043 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4093
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ +T+ G +++SWG G G LG G +
Sbjct: 4094 SMALTESG-EVFSWGDGDYGKLGHGNS 4119
Score = 54 (24.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 14/70 (20%), Positives = 29/70 (41%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++I V G LA+ + ++ WGN + ++ P V G + +
Sbjct: 665 TRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGIAIQQ 722
Query: 62 VACGSEHVVA 71
++ G+ H +A
Sbjct: 723 ISAGTSHSLA 732
Score = 44 (20.5 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 344 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 402
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHSFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 403 YRNMLAGVKDKLMKRRIQEIVNECL 427
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 311 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 369
+ EIK + EE DE L +++ ++E + HGS GK + A +
Sbjct: 2010 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCLVENGQILTHGS-GGKGYGLASTGVT 2068
Query: 370 ISLKDMGFFDITKE 383
F+ I KE
Sbjct: 2069 SGCYQWKFY-IVKE 2081
Score = 38 (18.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 304 ELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE-MKLLQSKLSVME 347
++ TG D++K++ ++ +E S +++ + ++S+ + E
Sbjct: 2439 DMRTGLTSDDVKSQSTTSSKSENEIASFSLDPTLPSVESQHQITE 2483
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 169 (64.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 66/217 (30%), Positives = 96/217 (44%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
ED Y+ G N GQLG S+ P + T + V CG H+ L+
Sbjct: 51 EDGEVYTCGLNTKGQLGHESEGSK--PAWVGTLAGQH---IVHVACGESHSVALS----- 100
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
D + W G G +GQLG T + A+ VP +K+L Q L + CG +H +++ G
Sbjct: 101 -DQGQVFSW--GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTIL-QISCGNWHCLALAADG 156
Query: 201 DVWSWGMEK----GLGL-CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
++WG GLG CP+ AS R ++ D I P+ QVA G A
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PL---------------AQVAAGGA 200
Query: 255 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
H+ ++ G ++ WG+ SG LG D +P V
Sbjct: 201 HSFALSLSG-AVFGWGKNSSGQLGLSDERDRESPCHV 236
Score = 157 (60.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N++GQLGL D R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 206 G 206
G
Sbjct: 320 G 320
Score = 131 (51.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 41/132 (31%), Positives = 64/132 (48%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW--DFHGHTVVKVAC 64
V GG S+ + G ++ C L +T+G S + P W G +V VAC
Sbjct: 39 VACGGNHSVFLLEDGEVY---TCGL---NTKGQLGHESEGS-KPAWVGTLAGQHIVHVAC 91
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVY 123
G H VAL G+ + SWGA ++GQLGL E + P++I+ NQ + +
Sbjct: 92 GESHSVALSDQGQVF--------SWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQT---IL 140
Query: 124 EVTCGSFHTALL 135
+++CG++H L
Sbjct: 141 QISCGNWHCLAL 152
Score = 128 (50.1 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G+N GQLG + P VK L +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK-VVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G C L + D ++P + G + Q+ACG HT+ ++++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLEL--MGSEVS---QIACGRHHTLAFVPSSGMIYAF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G G LGTG T + P+ V
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPV 341
Score = 112 (44.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 61
I V G S+A+ + G ++ WG S + G + + P + + T+++
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWG----AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 120
++CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ + P
Sbjct: 142 ISCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GIPL 192
Query: 121 AVYEVTCGSFHTALLT 136
A +V G H+ L+
Sbjct: 193 A--QVAAGGAHSFALS 206
Score = 91 (37.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 31/91 (34%), Positives = 39/91 (42%)
Query: 48 PSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P P V+ F H V +VACG H V L+ GE Y C G N GQLG S+
Sbjct: 23 PEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLGHESEGSK 74
Query: 106 LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
P + T + V CG H+ L+
Sbjct: 75 --PAWVGTLAGQH---IVHVACGESHSVALS 100
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 201 (75.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 82/302 (27%), Positives = 126/302 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVV 60
I + AG S AI G L+MWG +SS + G ++ P+ V HG T+
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGK----NSSGQLGLGKKAARVVRVPTKVEALHGITIQ 191
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
VA GSEH VA+ GE SWG +G+LG G + S I+ + ++ +P
Sbjct: 192 SVALGSEHSVAVTDGGEVL--------SWGGGGSGRLGHGHQSSLFG--ILRSNSEFTPR 241
Query: 121 AVYEVTCGSFHT---ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
+ E+ G T A L H ++ + FG ++G G ++A P + E+
Sbjct: 242 LIKELE-GIKVTNVAAGLLHSACTDE--NGSAFMFGEKSINKMGFGGVRNATTPSIISEV 298
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL----- 232
P Y V CG +HT VV+ G++++WG + L +++ + P L
Sbjct: 299 P---YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVS 355
Query: 233 -ISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 289
+S H D G +H D G G LG G +D+ PA
Sbjct: 356 QVSCGWKHTAAISDNNVFTWGWGGSHGTFSVD--------GHSSGGQLGHGSDVDYARPA 407
Query: 290 IV 291
+V
Sbjct: 408 MV 409
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 75/260 (28%), Positives = 117/260 (45%)
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLV---CYSWGANNNGQLGLGDRESRLRPKII 111
H ++V+ G + + +SAG + V Y WG N++GQLGLG + +R+ ++
Sbjct: 122 HAMDPLEVS-GLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARV-VRVP 179
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-------- 163
+ V GS H+ +T D E + W G G +G+LGHG
Sbjct: 180 TKVEALHGITIQSVALGSEHSVAVT------DGGEVLSW--GGGGSGRLGHGHQSSLFGI 231
Query: 164 -TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
+ S P +KEL + + + +V GL H++ G + +G EK + + RN
Sbjct: 232 LRSNSEFTPRLIKEL-EGIKVTNVAAGLLHSACTDENGSAFMFG-EKSINKMGFGGV-RN 288
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
A +P +IS P+ +VACG HT +VT G +L++WG +G LGT T
Sbjct: 289 ----ATTPSIIS-EVPYAE------EVACGGYHTCVVTRGG-ELYTWGSNENGCLGTDST 336
Query: 283 IDFFAPAIVLWPPLTEEFKQ 302
+P V P L Q
Sbjct: 337 YVSHSPVRVEGPFLESTVSQ 356
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 59/198 (29%), Positives = 86/198 (43%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV-SSFTPSPVWDFHGHTVVK 61
++ +V AG + S D G+ +M+G S + GF V ++ TPS + + +
Sbjct: 250 KVTNVAAGLLHSACTDENGSAFMFGE----KSINKMGFGGVRNATTPSIISEVP--YAEE 303
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VACG H + GE Y +WG+N NG LG P +E +S
Sbjct: 304 VACGGYHTCVVTRGGELY--------TWGSNENGCLGTDSTYVSHSPVRVEGPFLES--T 353
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGTTQSALVPEQVKELP 178
V +V+CG HTA ++ TF G GQLGHG+ P V +L
Sbjct: 354 VSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMV-DLG 412
Query: 179 QYVYLVSVDCGLFHTSVV 196
+ V V + CG HT+ V
Sbjct: 413 KNVRAVHISCGFNHTAAV 430
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 89 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 148
WG+ + G+LGLG+ +S+ P + + S + V CG HT LT +R
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHS---ITAVACGGAHTLFLTETRR-------- 102
Query: 149 CWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+ GL + GQLG +S A+ P +V L + + +S G +H++ ++ G+++ WG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISA--GYYHSAAITVDGELYMWGK 160
Query: 208 EKG--LGLCPNAS 218
LGL A+
Sbjct: 161 NSSGQLGLGKKAA 173
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/201 (27%), Positives = 85/201 (42%)
Query: 70 VALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
V V+AG + E+ + +G + ++G G + P II + P+A EV
Sbjct: 251 VTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIIS----EVPYAE-EVA 305
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS- 185
CG +HT ++T R ++ +T+G ENG LG +T + P +V E P VS
Sbjct: 306 CGGYHTCVVT---RGGEL-----YTWGSNENGCLGTDSTYVSHSPVRV-EGPFLESTVSQ 356
Query: 186 VDCGLFHTSVVSSAGD-VWSWGMEKGL----GLCPNASLTRNEAGDAISPILISGNGPHG 240
V CG HT+ +S W WG G G L D P ++ G
Sbjct: 357 VSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVD----LG 412
Query: 241 PKFQDPVQVACGAAHTVLVTD 261
+ V ++CG HT V +
Sbjct: 413 KNVR-AVHISCGFNHTAAVLE 432
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 207 (77.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 69/225 (30%), Positives = 106/225 (47%)
Query: 78 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 137
T +GE +SWG + G+LG G + +PK+I+ N + + V CG FH+ +T
Sbjct: 324 TKQGES---FSWGEESEGRLGHGVDSNIQQPKLIDALNTTN---IELVACGEFHSCAVT- 376
Query: 138 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 197
L +T+G G+ G LGHG S VP++V L + +++ S+ CG +HT+VV+
Sbjct: 377 -------LSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVT 429
Query: 198 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 257
SAG ++++G + G+ + GD S + I K V+ ACG HT
Sbjct: 430 SAGQLFTFG-DGTFGVLGH--------GDKKS-VFIPRE-VDSLKGLRTVRAACGVWHTA 478
Query: 258 LVTD-----------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
V + KL++WG G G LG G P V
Sbjct: 479 AVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV 523
Score = 178 (67.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 56/209 (26%), Positives = 98/209 (46%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPN 142
+++G G LG GD++S P+ +++ CG +HTA ++ +
Sbjct: 435 FTFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 143 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 202
+ +T+G G+ G+LGHG + LVP V L + + V CG T ++++G V
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC-QVACGHSLTVALTTSGHV 550
Query: 203 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
++ G P N D +P + G H F + ++ACGA H ++T
Sbjct: 551 YTMGS-------PVYGQLGNSHADGKTPNRVEGK-LH-KSFVE--EIACGAYHVAVLTSR 599
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++++WG+G +G LG G D +P +V
Sbjct: 600 T-EVYTWGKGSNGRLGHGDVDDRNSPTLV 627
Score = 176 (67.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 70/286 (24%), Positives = 113/286 (39%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ S+ G + + +AG L+ +G+ G S F P V G V+ A
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTF---GVLGHGDKKSVFIPREVDSLKGLRTVRAA 471
Query: 64 CGSEHVVALVSA--GETYKGE--DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
CG H A+V G + ++WG + G+LG G++E +L P + + +
Sbjct: 472 CGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN- 530
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
+V CG T LT +T G GQLG+ P +V+
Sbjct: 531 --FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNSHADGK-TPNRVEGKLH 579
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
++ + CG +H +V++S +V++WG KG N L + D SP L+
Sbjct: 580 KSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDVDDRNSPTLVESL--- 630
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 285
K + +ACG T V W+ G +S G + F
Sbjct: 631 --KDKQVKSIACGTNFTAAVC---IHRWASGMDQSMCSGCRQPFSF 671
Score = 169 (64.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 56/205 (27%), Positives = 92/205 (44%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 65
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGK---GDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + SAG+ + ++G G LG GD++S P+ +++
Sbjct: 422 PYHTAVVTSAGQLF--------TFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRA 470
Query: 126 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V L +
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWG 206
+ V CG T ++++G V++ G
Sbjct: 531 FC-QVACGHSLTVALTTSGHVYTMG 554
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 200 (75.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 94/334 (28%), Positives = 144/334 (43%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ + G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLDVPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ S V + CG++ T ++H E + FGL QLG T+S
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGHVYGFGLSNYHQLGTPGTESCF 281
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGD 226
+P+ + V G HT + S G +S G E G LGL A +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAE-------E 334
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 286
P LIS + VACGA+ VT DG ++++WG G + LGTG+ D +
Sbjct: 335 KSIPTLIS-------RLPAVSSVACGASVGYAVTKDG-RVFAWGMGTNYQLGTGQDEDAW 386
Query: 287 APAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
+P ++ L +++GG + KD E
Sbjct: 387 SPVEMMGKQLENRVVLS-VSSGGQHTVLLVKDKE 419
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 209 (78.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 69/213 (32%), Positives = 105/213 (49%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
+V+ WG K G LGL + + +A SP LI G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGLGIDC---KKQA----SPQLIKSL--LGIPF---MQVAAGGAHSFV 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 188 (71.2 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVY-ICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 143 (55.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 202 VWSWGMEKG--LGL 213
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 129 (50.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 39/134 (29%), Positives = 53/134 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IV 245
Query: 123 YEVTCGSFHTALLT 136
Y + CG HTA LT
Sbjct: 246 Y-ICCGEDHTAALT 258
Score = 126 (49.4 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 47/156 (30%), Positives = 68/156 (43%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N I+P + G Q+ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSAFVPSSGRIYSF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEEFKQD 303
G G +G LGTG T + +P V W P + D
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPD 355
Score = 122 (48.0 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG DS +G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + C WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P+ +V G H+ +LT
Sbjct: 191 PFM--QVAAGGAHSFVLT 206
Score = 109 (43.4 bits), Expect = 8.8e-11, Sum P(3) = 8.8e-11
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLLGSEECIR 126
Query: 108 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 150
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 43 (20.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 20/93 (21%), Positives = 42/93 (45%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 395
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 396 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 424
L LE ++ N G ++ DK +QE+++
Sbjct: 594 LKVLEILHKVNEKTGQIIQYDKFYIHEVQELID 626
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 209 (78.6 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 69/213 (32%), Positives = 105/213 (49%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
+V+ WG K G LGL + + +A SP LI G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGLGIDC---KKQA----SPQLIKSL--LGIPF---MQVAAGGAHSFV 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 188 (71.2 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVY-ICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 143 (55.4 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 202 VWSWGMEKG--LGL 213
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 39/134 (29%), Positives = 53/134 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IV 245
Query: 123 YEVTCGSFHTALLT 136
Y + CG HTA LT
Sbjct: 246 Y-ICCGEDHTAALT 258
Score = 126 (49.4 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 47/156 (30%), Positives = 68/156 (43%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N I+P + G Q+ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSAFVPSSGRIYSF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEEFKQD 303
G G +G LGTG T + +P V W P + D
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPD 355
Score = 122 (48.0 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG DS +G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + C WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P+ +V G H+ +LT
Sbjct: 191 PFM--QVAAGGAHSFVLT 206
Score = 109 (43.4 bits), Expect = 9.0e-11, Sum P(3) = 9.0e-11
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLLGSEECIR 126
Query: 108 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 150
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 43 (20.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 20/93 (21%), Positives = 42/93 (45%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 395
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 396 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 424
L LE ++ N G ++ DK +QE+++
Sbjct: 594 LKVLEILHKVNEKTGQIIQYDKFYIHEVQELID 626
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 207 (77.9 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 65/213 (30%), Positives = 102/213 (47%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 142 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLVGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
+V+ WG K G LGL + + + +L G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLL-------GIPF---MQVAAGGAHSFV 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 189 (71.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 205
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSGRIYSF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGN 236
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 142 (55.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 84 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFVLD---- 51
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 202 VWSWGMEKG--LGL 213
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 126 (49.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 39/134 (29%), Positives = 53/134 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IV 245
Query: 123 YEVTCGSFHTALLT 136
Y + CG HTA LT
Sbjct: 246 Y-ICCGEDHTAALT 258
Score = 123 (48.4 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG DS +G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + C WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P+ +V G H+ +LT
Sbjct: 191 PFM--QVAAGGAHSFVLT 206
Score = 123 (48.4 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 45/148 (30%), Positives = 65/148 (43%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG VP +K L +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK-IVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N I+P + G ++ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TEIACGRQHTSAFVPSSGRIYSF 319
Query: 270 GRGRSGVLGTGKTIDFFAPAIVL--WPP 295
G G +G LGTG T + +P V W P
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWYP 347
Score = 110 (43.8 bits), Expect = 9.5e-11, Sum P(3) = 9.5e-11
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLVGSEECIR 126
Query: 108 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 150
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 45 (20.9 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 336 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 395
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 396 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 424
L LE +R N G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNEKMGQIIQYDKFYIHEVQELID 626
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 177 (67.4 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 60/209 (28%), Positives = 93/209 (44%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVA 63
S+ G ++ + G ++ WG +S G V S+ P P + +F+G TV
Sbjct: 303 SISCGTNYAVLVTKQGQMYSWGE----ESGGRLGHG-VCSYVPHPKLIDEFNGSTVELAD 357
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG H A+ ++G+ Y D G +N G LGLG S +P + Q V
Sbjct: 358 CGEFHTCAVTASGDLYAWGD------GDHNAGLLGLGSGASHWKP--VRILGQMEGIYVK 409
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
++CG +HTA +T E +TFG G G LGHG S +P +V+ L +
Sbjct: 410 AISCGPWHTAFVTS--------EGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTI 461
Query: 184 VSVDCGLFHTSVVS------SAGDVWSWG 206
+ +VVS S+G +++WG
Sbjct: 462 KAACGVWHSAAVVSVFGEATSSGKLFTWG 490
Score = 168 (64.2 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 61/202 (30%), Positives = 92/202 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
YSWG + G+LG G PK+I+ FN + V CG FHT +T D+
Sbjct: 321 YSWGEESGGRLGHGVCSYVPHPKLIDEFNGST---VELADCGEFHTCAVT---ASGDLY- 373
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
W G G LG G+ S P ++ + +Y+ ++ CG +HT+ V+S G ++++G
Sbjct: 374 --AWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 431
Query: 207 MEKGLGLCPNASLTRNEAGDAISP-ILISGNGPHGPKFQDPVQVACGAAHTVLV------ 259
+ G + GD IS I +G + ++ ACG H+ V
Sbjct: 432 -DGTFGALGH--------GDRISTNIPREVEALNGCR---TIKAACGVWHSAAVVSVFGE 479
Query: 260 -TDDGYKLWSWGRGRSGVLGTG 280
T G KL++WG G G LG G
Sbjct: 480 ATSSG-KLFTWGDGDDGRLGHG 500
Score = 152 (58.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 87 YSWGA--NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 144
Y+WG +N G LGLG S +P + Q V ++CG +HTA +T
Sbjct: 373 YAWGDGDHNAGLLGLGSGASHWKP--VRILGQMEGIYVKAISCGPWHTAFVTS------- 423
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS-VVSSAGDVW 203
E +TFG G G LGHG S +P +V+ L + CG++H++ VVS G+
Sbjct: 424 -EGKLFTFGDGTFGALGHGDRISTNIPREVEAL-NGCRTIKAACGVWHSAAVVSVFGEAT 481
Query: 204 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 263
S G G + L + + P ++ FQ QVACG + TV ++ G
Sbjct: 482 SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDT--TSFQ---QVACGQSITVALSMSG 536
Query: 264 YKLWSWG 270
++++ G
Sbjct: 537 -QVYAMG 542
Score = 150 (57.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 10 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACGSEH 68
G + A+ +G L+ WG+ ++ G S S + P + G V ++CG H
Sbjct: 359 GEFHTCAVTASGDLYAWGDGD-HNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWH 417
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+ S G+ + ++G G LG GDR S P+ +E N + CG
Sbjct: 418 TAFVTSEGKLF--------TFGDGTFGALGHGDRISTNIPREVEALNG---CRTIKAACG 466
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 188
+H+A + +T+G G++G+LGHG + L+P V EL + V C
Sbjct: 467 VWHSAAVVS-VFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQ-QVAC 524
Query: 189 GLFHTSVVSSAGDVWSWG 206
G T +S +G V++ G
Sbjct: 525 GQSITVALSMSGQVYAMG 542
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00091
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK-VACG 65
V G +++A+ +G ++ G D S + +V + PS + G + V+ VACG
Sbjct: 522 VACGQSITVALSMSGQVYAMGTA---DPSHD----IVRA--PSCIEGGLGKSFVQEVACG 572
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H+ L S E Y +WG +NGQLG GD E R P +++ V +V
Sbjct: 573 FHHIAVLNSKAEVY--------TWGKGSNGQLGHGDTEYRCMPTLVKALKGKQ---VRKV 621
Query: 126 TCGSFHTALLTHRK 139
CGS +TA + K
Sbjct: 622 VCGSNYTATICLHK 635
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00091
Identities = 51/163 (31%), Positives = 73/163 (44%)
Query: 145 LESMCWTFGLGEN---GQLGHGT----TQSALVPEQV--KELPQYVYL--VSVDCGLFHT 193
L+S+C F GE+ G LG G + S+L+ + K L +V L S+ CG +
Sbjct: 252 LKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYA 311
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVA-C 251
+V+ G ++SWG E G L P LI NG V++A C
Sbjct: 312 VLVTKQGQMYSWGEESG------GRLGHGVCSYVPHPKLIDEFNG-------STVELADC 358
Query: 252 GAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVL 292
G HT VT G L++WG G +G+LG G + P +L
Sbjct: 359 GEFHTCAVTASG-DLYAWGDGDHNAGLLGLGSGASHWKPVRIL 400
Score = 102 (41.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 29/75 (38%), Positives = 37/75 (49%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
V EV CG H A+L N E W G G NGQLGHG T+ +P VK L +
Sbjct: 566 VQEVACGFHHIAVL------NSKAEVYTW--GKGSNGQLGHGDTEYRCMPTLVKAL-KGK 616
Query: 182 YLVSVDCGLFHTSVV 196
+ V CG +T+ +
Sbjct: 617 QVRKVVCGSNYTATI 631
Score = 102 (41.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 23 LWMWGNCPLPDSSTEGGF-------SLVS-SFTPSPVWDFHGHTVVKVACGSEHVVALVS 74
+++WG + D GG SL++ SF P + ++CG+ + V +
Sbjct: 258 VFVWGES-IGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTK 316
Query: 75 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 134
G+ Y SWG + G+LG G PK+I+ FN + V CG FHT
Sbjct: 317 QGQMY--------SWGEESGGRLGHGVCSYVPHPKLIDEFNGST---VELADCGEFHTCA 365
Query: 135 LT 136
+T
Sbjct: 366 VT 367
Score = 76 (31.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 220 TRNEAGDAI-SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
T + + D + +P I G G F +VACG H + V + ++++WG+G +G LG
Sbjct: 543 TADPSHDIVRAPSCIEGG--LGKSFVQ--EVACGFHH-IAVLNSKAEVYTWGKGSNGQLG 597
Query: 279 TGKTIDFFAPAIV 291
G T P +V
Sbjct: 598 HGDTEYRCMPTLV 610
Score = 66 (28.3 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
++ V CG H +V++S +V++WG KG N L + P L+
Sbjct: 565 FVQEVACGFHHIAVLNSKAEVYTWG--KG----SNGQLGHGDTEYRCMPTLVKAL----- 613
Query: 242 KFQDPVQVACGAAHTVLV 259
K + +V CG+ +T +
Sbjct: 614 KGKQVRKVVCGSNYTATI 631
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 209 (78.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 69/218 (31%), Positives = 104/218 (47%)
Query: 69 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-GQLGHGTTQSALVPEQVKELPQYVYLV 184
+CGS HT L+ R W+FG G+N G+LGHG T P+ V+ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNVGKLGHGDTNRVYKPKVVEAL-QGMFIR 618
Query: 185 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 244
V G + ++S G V++WG LG C ++ T A+ P LI +
Sbjct: 619 KVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIV 669
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
D ++ G +H L D ++++WG G G G +
Sbjct: 670 D---ISIGDSHVWLFVMDN-EVYAWGNNSMGQCGQGNS 703
Score = 193 (73.0 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 58 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4083 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4134
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4135 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4183
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 206
L Y + V CGL HT VS+ G VW++G
Sbjct: 4184 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4213
Score = 176 (67.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 74/278 (26%), Positives = 123/278 (44%)
Query: 29 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVVKVACGS--EHVVAL-------VSAGE- 77
C PDS G +VS VW + H +V+ + +AL + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEAGQY 413
Query: 78 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 134
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 255 HTVLVTDDGYKLWSWGRGRS-GVLGTGKTIDFFAPAIV 291
HT+ ++ DG +WS+G G + G LG G T + P +V
Sbjct: 572 HTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVV 609
Score = 172 (65.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4157 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4206
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4207 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4265
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 4266 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 4313
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAIV 291
++WG G LG G T P +V
Sbjct: 4314 YAWGSNSEGQLGLGHTNHVREPTLV 4338
Score = 150 (57.9 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4105 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4163
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4164 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4210
Query: 268 SWGRGRSGVLGTGKT 282
++G G G LG G +
Sbjct: 4211 AFGDGDYGKLGLGNS 4225
Score = 118 (46.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 40/137 (29%), Positives = 59/137 (43%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 59
+ ++ S K +LA G ++ WG+ D G G S + G V
Sbjct: 457 IKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 514 VCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN--- 562
Query: 120 WAVYEVTCGSFHTALLT 136
V EV+CGS HT L+
Sbjct: 563 --VGEVSCGSSHTIALS 577
Score = 112 (44.5 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C V AG S A+ G L+ WG D G S P+ V D V +V+
Sbjct: 514 VC-VSAGYRHSAAVTEDGELYTWGE---GDFGRLGHGDSNSRNIPTLVKDISN--VGEVS 567
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNN-GQLGLGDRESRLRPKIIETFNQDSPWAV 122
CGS H +AL G T +S+G +N G+LG GD +PK++E +
Sbjct: 568 CGSSHTIALSKDGRTV-------WSFGGGDNVGKLGHGDTNRVYKPKVVEALQG---MFI 617
Query: 123 YEVTCGSFHTALLT 136
+V GS + LT
Sbjct: 618 RKVCAGSQSSLALT 631
Score = 103 (41.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 35/143 (24%), Positives = 62/143 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V AG SLA+ + G ++ WG C + G S ++ P + + +V ++
Sbjct: 617 IRKVCAGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDIS 672
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAV 122
G HV V E Y +WG N+ GQ G G+ + +PK + + A+
Sbjct: 673 IGDSHVWLFVMDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---AI 721
Query: 123 YEVTCGSFHTALLTHRKRPNDML 145
+++ G+ H+ T R ++
Sbjct: 722 QQISAGTSHSLAWTALPRDRQVV 744
Score = 95 (38.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 36/136 (26%), Positives = 57/136 (41%)
Query: 1 MSQICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
+S + V G ++A+ G +W +G G + V + P V G +
Sbjct: 560 ISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRV--YKPKVVEALQGMFI 617
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDS 118
KV GS+ +AL S G+ Y +WG LG G E+ LRPK+IE +
Sbjct: 618 RKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGCGSSEATALRPKLIEEL---A 664
Query: 119 PWAVYEVTCGSFHTAL 134
+ +++ G H L
Sbjct: 665 ATRIVDISIGDSHVWL 680
Score = 88 (36.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 140 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3988 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4043
Query: 197 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 255
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4044 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4094
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKT 282
++ +T+ G +++SWG G G LG G +
Sbjct: 4095 SMALTESG-EVFSWGDGDYGKLGHGNS 4120
Score = 43 (20.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 344 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 402
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 764 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 822
Query: 403 YRNMLAGVKDKLMKRRIQEIVNECL 427
RN+L + D + IQE+V E L
Sbjct: 823 LRNLLFRLMDSTVPDEIQEVVIETL 847
Score = 42 (19.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 311 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 369
+ EIK++ EE DE L +++ ++E + HGS GK + A +
Sbjct: 2011 EQEIKSQKQGELEEEDENLPIQEVSFDPEKAQCCLVENGQILTHGS-GGKGYGLASTGVT 2069
Query: 370 ISLKDMGFFDITKE 383
F+ I KE
Sbjct: 2070 SGCYQWKFY-IVKE 2082
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 46/129 (35%), Positives = 66/129 (51%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D + R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT ++V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL-MGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 206 GM-EKG-LG 212
G KG LG
Sbjct: 320 GCGAKGQLG 328
Score = 157 (60.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 63/213 (29%), Positives = 92/213 (43%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
ED Y+ G N GQLG +RE +P+ I + V CG H+ L+ R
Sbjct: 51 EDGEVYTCGVNTKGQLG-HEREGN-KPEQIGALADQH---IIHVACGESHSLALSDR--- 102
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
+++G G +GQLG TT+ S VP +++L Q L V CG +H +++ G
Sbjct: 103 -----GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL-QVSCGNWHCLALAADG 156
Query: 201 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 258
++WG G LGL E SP + G QVA G AH+
Sbjct: 157 QFFTWGKNSHGQLGL-------GKEFPSQTSPQRV--RSLEGIPL---AQVAAGGAHSFA 204
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++ G ++ WG +G LG D +P V
Sbjct: 205 LSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 131 (51.2 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G C L + D ++P ++ G + Q+ACG HT+ + +++
Sbjct: 269 --GSC--GQLGHDSVNDEVNPRRVLELMG------SEVTQIACGRQHTLALVPSSGLIYA 318
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
+G G G LGTG T + P+ V
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 118
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 87 (35.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
++ +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY-----TC---GVNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 118 SPWAVYEVTCGSFHTALLTHR 138
+ V CG H+ L+ R
Sbjct: 85 H---IIHVACGESHSLALSDR 102
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 170 (64.9 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 50/185 (27%), Positives = 88/185 (47%)
Query: 88 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 147
+WG+ +GQLG+G E + ++E P++V V GS ++ + +
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALE---PYSVRSVVSGSRNSLAICD--------DG 57
Query: 148 MCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T+G + G LGH T++ +P +VK L V + G +H V G ++WG
Sbjct: 58 TMFTWGWNQRGTLGHQPETKTENIPSRVKALAN-VKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
+ G C L ++E G + ++ PK QVA G H+V++T +G+ +
Sbjct: 117 GNE-YGQCGEEPL-KDEMGRPVRRDIVIPKRC-APKLTVR-QVAAGGTHSVVLTREGH-V 171
Query: 267 WSWGR 271
W+WG+
Sbjct: 172 WTWGQ 176
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
+ G +LA++ G L WGN T G + +S P PV T+V +A G
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGT--GDTQPTSH-PVPVQGLDDLTLVDIAAGG 257
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--SRLRPKIIETFNQDSPWAVYE 124
H AL GE Y WG +G+LGLGD + S++ P+ + ++ + +
Sbjct: 258 WHSTALTDKGEVY--------GWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEED---IIQ 306
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 163
V+CG H+ LT R ++FG G++G+LG+G
Sbjct: 307 VSCGGTHSVALTRDGR--------IFSFGRGDHGRLGYG 337
Score = 156 (60.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+ W G E GQLG G TQ P V+ L LV + G +H++ ++ G+V+ WG
Sbjct: 218 LAW--GNNEYGQLGTGDTQPTSHPVPVQGLDDLT-LVDIAAGGWHSTALTDKGEVYGWGR 274
Query: 208 -EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
E G L N+ + P ++ +D +QV+CG H+V +T DG ++
Sbjct: 275 GEHG-----RLGLGDNDKSSKMVPQKVNLLAE-----EDIIQVSCGGTHSVALTRDG-RI 323
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAI--VLWPPLTEEFKQ-DELNTG 308
+S+GRG G LG G+ + P + PP F DE G
Sbjct: 324 FSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEG 368
Score = 142 (55.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 48 PSPVWDFHGHTV-VKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRE 103
P P D +V V+V G E+V L++ G + ED +WG N GQLG GD +
Sbjct: 177 PWPPGDIKQISVPVRVQ-GLENV-RLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQ 234
Query: 104 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 163
P ++ + + ++ G +H+ LT D E W G GE+G+LG G
Sbjct: 235 PTSHPVPVQGLDD---LTLVDIAAGGWHSTALT------DKGEVYGW--GRGEHGRLGLG 283
Query: 164 TTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
S +VP++V L + ++ V CG H+ ++ G ++S+G L +T
Sbjct: 284 DNDKSSKMVPQKVNLLAEED-IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTT 342
Query: 222 NEAGDAISPILI---SGNGPHGPKFQD----PVQVACGAAHTVLVTD 261
+ + PI I G+ H + ++ +ACG HT+ + +
Sbjct: 343 GQPLEL--PIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387
Score = 82 (33.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 42/153 (27%), Positives = 58/153 (37%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVAC 64
SV +G SLAI + G ++ WG T G + PS V + + A
Sbjct: 42 SVVSGSRNSLAICDDGTMFTWG---WNQRGTLGHQPETKTENIPSRVKALANVKITQAAI 98
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG---LGDRESR-LRPKIIETFNQDSPW 120
G H +A+ G Y +WG N GQ G L D R +R I+
Sbjct: 99 GGWHCLAVDDQGRAY--------AWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL 150
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 153
V +V G H+ +LT E WT+G
Sbjct: 151 TVRQVAAGGTHSVVLTR--------EGHVWTWG 175
Score = 57 (25.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 22/70 (31%), Positives = 29/70 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V AGG S+ + G +W WG P P G +S P V V +A G+
Sbjct: 155 VAAGGTHSVVLTREGHVWTWGQ-PWPP----GDIKQIS--VPVRVQGLEN--VRLIAVGA 205
Query: 67 EHVVALVSAG 76
H +AL G
Sbjct: 206 FHNLALEEDG 215
Score = 51 (23.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 22/82 (26%), Positives = 29/82 (35%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGH 57
+I GG LA+D+ G + WG C E G + P
Sbjct: 92 KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIV-IPKRCAPKL 150
Query: 58 TVVKVACGSEHVVALVSAGETY 79
TV +VA G H V L G +
Sbjct: 151 TVRQVAAGGTHSVVLTREGHVW 172
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 163 (62.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 47/129 (36%), Positives = 65/129 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D E R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 206 GM-EKG-LG 212
G KG LG
Sbjct: 320 GCGAKGQLG 328
Score = 159 (61.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 69/236 (29%), Positives = 101/236 (42%)
Query: 64 CG--SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I
Sbjct: 28 CGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN-KPEQIGALADQH 85
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 177
+ V CG H+ L+ R +++G G +GQLG TT+ S VP +++L
Sbjct: 86 ---IVHVACGESHSLALSDR--------GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 235
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGL-------GKEYPSQASPQRV-- 184
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCHV 236
Score = 129 (50.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
+G G G LGTG T + P+ V
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPV 341
Score = 123 (48.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 38/138 (27%), Positives = 70/138 (50%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
++V+CG+ H +AL + G+ + +WG N++GQLGLG + S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEYPSQASPQRVRSL-EGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 87 (35.7 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 118 SPWAVYEVTCGSFHTALLTHR 138
+ V CG H+ L+ R
Sbjct: 85 H---IVHVACGESHSLALSDR 102
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 194 (73.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 75/250 (30%), Positives = 114/250 (45%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE---SRLRP-KII 111
G +V VA G H +AL G+ + WG GQLGLG R S P I
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVW--------GWGYGGEGQLGLGSRVRLVSSPHPIPCI 284
Query: 112 E--TFNQDSPWAVYE---VTCG----SFHTALLTHRKRPNDMLES-MCWTFGLGENGQLG 161
E ++ + + V V CG S+ + + + ++ TFG G GQ G
Sbjct: 285 EPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCG 344
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
G+T L P V L + + V GL+HT+ SS GDV+++G + G T
Sbjct: 345 QGSTDDELSPTCVSSLLG-IRIEEVAAGLWHTTCASSDGDVYAFGGNQ-FGQLG----TG 398
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ + + +L + N + + ++CGA HT ++TD+G +++ WG + G LG G
Sbjct: 399 CDQAETLPKLLEAPNLEN----VNVKTISCGARHTAVITDEG-RVFCWGWNKYGQLGIGD 453
Query: 282 TIDFFAPAIV 291
ID APA V
Sbjct: 454 VIDRNAPAEV 463
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 79/279 (28%), Positives = 118/279 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVV 60
+I SV AGG +LA+ + G +W WG LVSS P P + +G
Sbjct: 235 RIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATS 294
Query: 61 K-------VACGSE--HVVALVSAGETYKG--ED---LVCYSWGANNNGQLGLGDRESRL 106
V CG V ++ G + D L+ + WG GQ G G + L
Sbjct: 295 SGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLY--GQCGQGSTDDEL 352
Query: 107 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 166
P + + + EV G +HT T D+ + FG + GQLG G Q
Sbjct: 353 SPTCVSSL---LGIRIEEVAAGLWHT---TCASSDGDV-----YAFGGNQFGQLGTGCDQ 401
Query: 167 SALVPEQVKELP--QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRN 222
+ +P+ + E P + V + ++ CG HT+V++ G V+ WG K G LG+
Sbjct: 402 AETLPKLL-EAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGI--------- 451
Query: 223 EAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLV 259
GD +I N P + +D P +ACG HT+L+
Sbjct: 452 --GD-----VIDRNAPAEVRIKDCFPKNIACGWWHTLLL 483
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S + + GG S I + GAL +G L +G S +P+ V G + +
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFG-WGLYGQCGQG--STDDELSPTCVSSLLGIRIEE 367
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VA G H S G+ Y ++G N GQLG G ++ PK++E N ++
Sbjct: 368 VAAGLWHTTCASSDGDVY--------AFGGNQFGQLGTGCDQAETLPKLLEAPNLENV-N 418
Query: 122 VYEVTCGSFHTALLTHRKR 140
V ++CG+ HTA++T R
Sbjct: 419 VKTISCGARHTAVITDEGR 437
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 43/121 (35%), Positives = 61/121 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D E R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRAQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 206 G 206
G
Sbjct: 320 G 320
Score = 161 (61.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 69/236 (29%), Positives = 102/236 (43%)
Query: 64 CG--SEHVVALVSAG---ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I +
Sbjct: 28 CGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN-KPEQIGALADEH 85
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 177
+ V CG H+ L+ R +++G G +GQLG TT+ S VP +++L
Sbjct: 86 ---IVHVACGESHSLALSDR--------GQLFSWGAGSDGQLGLMTTEESVAVPRLIQKL 134
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 235
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGL-------GKEFPSQASPQRV-- 184
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCHV 236
Score = 128 (50.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLL-RAQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
+G G G LGTG T + P+ V
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEESVAVPRLIQKLNQQTI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 118
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 91 (37.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V +VACG +H V L+ GE Y C G N GQLG +RE +P+ I +
Sbjct: 35 SVKEVACGGDHSVFLLEDGEVY-----TC---GLNTKGQLG-HEREGN-KPEQIGALADE 84
Query: 118 SPWAVYEVTCGSFHTALLTHR 138
+ V CG H+ L+ R
Sbjct: 85 H---IVHVACGESHSLALSDR 102
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 159 (61.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 69/236 (29%), Positives = 101/236 (42%)
Query: 64 CG--SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I
Sbjct: 28 CGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN-KPEQIGALADQH 85
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 177
+ V CG H+ L+ R +++G G +GQLG TT+ S VP +++L
Sbjct: 86 ---IIHVACGESHSLALSDR--------GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 235
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGL-------GKEFPSQASPQRV-- 184
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 158 (60.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D + R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 206 G 206
G
Sbjct: 320 G 320
Score = 127 (49.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
+G G G LGTG T + P+ V
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 118
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 119 PWAVYEVTCGSFHTALLT 136
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 87 (35.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 118 SPWAVYEVTCGSFHTALLTHR 138
+ V CG H+ L+ R
Sbjct: 85 H---IIHVACGESHSLALSDR 102
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 158 (60.7 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D + R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 206 G 206
G
Sbjct: 320 G 320
Score = 149 (57.5 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 68/236 (28%), Positives = 98/236 (41%)
Query: 64 CG--SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I
Sbjct: 28 CGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN-KPEQIGALADQH 85
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 177
+ V CG H+ L+ D + W G G +GQLG T + S VP +++L
Sbjct: 86 ---IVHVACGESHSLALS------DQGQLFSW--GAGSDGQLGLMTIEDSVAVPRLIQKL 134
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 235
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGRNSHGQLGL-------GKEFPSQASPQRV-- 184
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G QV G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVVAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 127 (49.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 210 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
+G G G LGTG T + P+ V
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVK 61
I V G SLA+ + G L+ WG S + G + S P + + T+++
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWG----AGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQ 141
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 120
V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + + P
Sbjct: 142 VSCGNWHCLALAADGQFF--------TWGRNSHGQLGLGKEFPSQASPQRVRSL-EGIPL 192
Query: 121 AVYEVTCGSFHTALLT 136
A +V G H+ L+
Sbjct: 193 A--QVVAGGAHSFALS 206
Score = 84 (34.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY-----TC---GVNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 118 SPWAVYEVTCGSFHTALLT 136
+ V CG H+ L+
Sbjct: 85 H---IVHVACGESHSLALS 100
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 193 (73.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 80/280 (28%), Positives = 124/280 (44%)
Query: 10 GGMMSLAIDNAGALWM--WGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGS 66
G + + G ++ WGN TE + P P+ VV++A G
Sbjct: 257 GNYFTAVLSREGKVYTFSWGNDGRLGHQTEA-----ADVEPRPLLGPLENVPVVQIAAGY 311
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
+++AL + + YS G G+LG G R P++IE F Q V
Sbjct: 312 CYLLALAC-----QPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQF-QILNLQPRVVA 365
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 186
G++H A++ R +C T+G G G LGHG + VP+ V+ L +V V V
Sbjct: 366 AGAWHAAVVGQDGR-------VC-TWGWGRYGCLGHGNEECESVPKVVEGL-SHVKAVHV 416
Query: 187 DCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 244
G + T VVS GDV+S+G + LG P+ N + +SP +++ +
Sbjct: 417 ATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERM- 475
Query: 245 DPVQVACGA-----AHTVLVTDDGYKLWSWGRGRSGVLGT 279
VQ++ AHT +T+ G KL+++G G G LGT
Sbjct: 476 --VQISLTNSIYWNAHTFALTESG-KLFAFGAGDQGQLGT 512
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 57/214 (26%), Positives = 92/214 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I AG ++ I + G ++ G ++ GG TP V VV+
Sbjct: 196 RIIQAAAGAARTMLISDDGKVYACGKESFGEAEY-GGQGTKPVTTPQLVTSLKNIFVVQA 254
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G+ L G+ Y +SWG N+G+LG + + P+ + ++ P V
Sbjct: 255 AIGNYFTAVLSREGKVYT------FSWG--NDGRLGHQTEAADVEPRPLLGPLENVP--V 304
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
++ G + LL +PN M S+ ++ G G G+LGHG+ P +++ Q +
Sbjct: 305 VQIAAG--YCYLLALACQPNGM--SV-YSVGCGLGGKLGHGSRTDEKYPRVIEQF-QILN 358
Query: 183 LVS--VDCGLFHTSVVSSAGDV--WSWGMEKGLG 212
L V G +H +VV G V W WG LG
Sbjct: 359 LQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 392
Score = 120 (47.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 56/187 (29%), Positives = 82/187 (43%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
V ++ G + LL +PN M ++ G G G+LGHG+ P +++ Q +
Sbjct: 304 VVQIAAG--YCYLLALACQPNGM---SVYSVGCGLGGKLGHGSRTDEKYPRVIEQF-QIL 357
Query: 182 YLVS--VDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 237
L V G +H +VV G V W WG LG NE +++ P ++ G
Sbjct: 358 NLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-------HGNEECESV-PKVVEGLS 409
Query: 238 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP--AIVLWPP 295
H V VA G T +V+DDG ++S+G G S LG + D A VL P
Sbjct: 410 -H----VKAVHVATGDYTTFVVSDDG-DVYSFGCGESASLGHHPSFDEQGNRHANVLSPT 463
Query: 296 LTEEFKQ 302
+ KQ
Sbjct: 464 VVTSLKQ 470
Score = 117 (46.2 bits), Expect = 0.00091, P = 0.00091
Identities = 44/154 (28%), Positives = 66/154 (42%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+ G H VA+ S GE Y ++G NN+GQLG G E R I+
Sbjct: 147 QAVAGPGHSVAVTSKGEVY--------TFGYNNSGQLGHGHTEDEAR---IQPVRSLQGV 195
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 180
+ + G+ T L++ +D C GE G GT + P+ V L
Sbjct: 196 RIIQAAAGAARTMLIS-----DDGKVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKN- 248
Query: 181 VYLVSVDCGLFHTSVVSSAGDVW--SWGMEKGLG 212
+++V G + T+V+S G V+ SWG + LG
Sbjct: 249 IFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLG 282
Score = 48 (22.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/129 (20%), Positives = 54/129 (41%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
AG S+A+ + G ++ +G +S G PV G +++ A G+
Sbjct: 150 AGPGHSVAVTSKGEVYTFG---YNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAAR 206
Query: 69 VVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 127
+ + G+ Y G++ S+G G G G + P+++ + V +
Sbjct: 207 TMLISDDGKVYACGKE----SFGEAEYG--GQGTKPVTT-PQLVTSLKNIF---VVQAAI 256
Query: 128 GSFHTALLT 136
G++ TA+L+
Sbjct: 257 GNYFTAVLS 265
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 190 (71.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 94/331 (28%), Positives = 140/331 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLSMPVV 175
Query: 61 KVACGSEHVVALVSAGETY---KGEDLVCY---SWGANNNGQLGLGDRESRLRPKIIETF 114
KVA G++H+V L + GE Y GE AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGL---ERLLVPKCVMLK 232
Query: 115 NQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
++ S V + CG++ T ++ E + FGL QLG T+S VP+
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISS--------EGHVYGFGLSNYHQLGTPGTESCFVPQ 284
Query: 173 QVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAIS 229
+ V G HT + S G +S G E G LGL A +
Sbjct: 285 NLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAE-------EKSV 337
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 289
P LIS + VACGA+ VT DG ++++WG G + LGTG+ D ++P
Sbjct: 338 PTLIS-------RLPAVSSVACGASVGYAVTKDG-RVFAWGMGTNYQLGTGQEEDAWSPV 389
Query: 290 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
+ L +++GG + KD E
Sbjct: 390 EMTGKQLENRMVLS-VSSGGQHTVLLVKDKE 419
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 191 (72.3 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 76/246 (30%), Positives = 111/246 (45%)
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V+V+C A S T +G+ +SWG N+ GQLG GD + PK+IE ++
Sbjct: 121 VQVSCVVSGPCAAHSLIITTEGK---LWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE-- 175
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELP 178
+ CG HT LT +TFG + GQLG G T + L P ++
Sbjct: 176 -VIVAAACGRNHTLALTEN--------GTVYTFGENKLGQLGQGNQTDAVLSPATIQYNG 226
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNAS-LTRNEAGDAISPILISG 235
Q + V V CG + +V G+++S+G E G LG + + R + + ++
Sbjct: 227 QPI--VKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRR 284
Query: 236 NGPHGPKFQD----PV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 285
K +D PV VACGA HT LV D +++SWG G G LG + D
Sbjct: 285 VAIFIEKTKDGQVLPVPNVVARDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKDE 343
Query: 286 FAPAIV 291
P +V
Sbjct: 344 MVPRLV 349
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 72/293 (24%), Positives = 119/293 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I + G +LA+ G ++ +G L V S P+ + ++G +VKVA
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLS--PATI-QYNGQPIVKVA 233
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ-LGLGDR---ESRLRPKIIETF---NQ 116
CG+E + + G Y G N++G+ + R + L P+ + F +
Sbjct: 234 CGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTK 293
Query: 117 DS-----PWAVY-EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 170
D P V +V CG+ HT +L +KR +++G G G+LGH + +V
Sbjct: 294 DGQVLPVPNVVARDVACGANHTLVLDSQKR--------VFSWGFGGYGRLGHAEQKDEMV 345
Query: 171 PEQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 228
P VK + P + CG + +S G ++ WG+ N S A+
Sbjct: 346 PRLVKLFDFPGRG-ATQIYCGYQCSFALSEMGGLFFWGVT-------NTSRESTMYPKAV 397
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS-GVLGTG 280
+ G K + +ACG + ++ DD SWG + G LG G
Sbjct: 398 QDLC-------GWKIRS---LACGKSSIIVAADDS--TISWGPSPTFGELGYG 438
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 195 (73.7 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 64/215 (29%), Positives = 98/215 (45%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+++ + G S+A+ N G L++WG +L+ S P + G V +
Sbjct: 118 TKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS--PQHLQSLCGIPVAQ 175
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
++ G H L +G V + WG+N+ GQLGLGD R P I+++ +
Sbjct: 176 ISAGGNHSFVLSLSG--------VVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK--- 224
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
++CG HTA L+ +TFG G GQLGH + + P V EL +
Sbjct: 225 TVSISCGGEHTATLSKG--------GTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WG 274
Query: 182 YLVS-VDCGLFHTSV-VSSAGDVWSWG--MEKGLG 212
VS V CG HT V V+ ++S+G M+ LG
Sbjct: 275 SKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLG 309
Score = 158 (60.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 54/160 (33%), Positives = 74/160 (46%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG G T VP VK L VS+ CG HT+ +S G V+++G
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK-TVSISCGGEHTATLSKGGTVFTFG-SG 250
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N D P L++ G K QV CG HT+++ +++S+
Sbjct: 251 GFG-----QLGHNSLKDEHHPRLVAELW--GSKVS---QVTCGRHHTLVLVALTNRIYSF 300
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLTE-EFKQDELNTG 308
G G G LG G+ + P VL P EF +++ G
Sbjct: 301 GCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAG 340
Score = 40 (19.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYKGEDL-VCYSW-GANNNG--QLGLGDRES 104
D + + CG + V L G+ + VC G +N Q+ GD+ S
Sbjct: 75 DLKREKIRSIVCGEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHS 130
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 187 (70.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N +GQLG G S P+ ++ S + +++ G H L D
Sbjct: 214 YAWGNNASGQLGNGTTLSNHMPQKVQL---PSSITIRKISAGGSHNLAL-------DSTG 263
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSW 205
++ W +G GQLG+GTT + P Q+ LP V + V G H+ V+S V++W
Sbjct: 264 AI-WAWGSNAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTW 321
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC-GAAHTVLVTDDGY 264
G LGL L+ GD +SP + + + P F D +V G+ T++ +
Sbjct: 322 GFNT-LGL-----LSVGTTGDQLSPAQVR-DASNVP-FTDVERVVLLGSFFTIVKKNGSG 373
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+W+WG G LG G T + AP V P
Sbjct: 374 GMWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 65/216 (30%), Positives = 97/216 (44%)
Query: 10 GGMMSLAI---DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
G +LAI DN + WG+ + ++ +S TP + F G V +VA G
Sbjct: 91 GASHTLAIARFDNVSGVRAWGSNSAGQIGRDPA-TVPTSSTPVKIGGFGG-AVQQVAAGG 148
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKIIETFNQDSPWAVYE 124
H +AL AG T ++WG+N+ GQL L S R P+ +ET P A
Sbjct: 149 LHSMAL--AGGTV-------WAWGSNSAGQLALNPISSATRFAPRQVETAKL--PIAPTA 197
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
+ G H+ T E+ W G +GQLG+GTT S +P++V +LP + +
Sbjct: 198 IVAGGSHSIAYTST-------EAYAW--GNNASGQLGNGTTLSNHMPQKV-QLPSSITIR 247
Query: 185 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 220
+ G H + S G +W+WG G N + T
Sbjct: 248 KISAGGSHNLALDSTGAIWAWG-SNAYGQLGNGTTT 282
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/176 (30%), Positives = 79/176 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWG-NC--PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
I + AGG +LA+D+ GA+W WG N L + +T + V P+ V F +
Sbjct: 246 IRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGF-----I 300
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
V G H VA+ S + Y+WG N G L +G +L P + + + P+
Sbjct: 301 DVFAGPSHSVAVAS--------NFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDAS-NVPF 351
Query: 121 AVYE--VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
E V GSF T + +K + + W +G GQLG GTT + P QV
Sbjct: 352 TDVERVVLLGSFFTIV---KKNGSGGM----WAWGYNGYGQLGDGTTSNRTAPVQV 400
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 187 (70.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N +GQLG G S P+ ++ S + +++ G H L D
Sbjct: 214 YAWGNNASGQLGNGTTLSNHMPQKVQL---PSSITIRKISAGGSHNLAL-------DSTG 263
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSW 205
++ W +G GQLG+GTT + P Q+ LP V + V G H+ V+S V++W
Sbjct: 264 AI-WAWGSNAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTW 321
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC-GAAHTVLVTDDGY 264
G LGL L+ GD +SP + + + P F D +V G+ T++ +
Sbjct: 322 GFNT-LGL-----LSVGTTGDQLSPAQVR-DASNVP-FTDVERVVLLGSFFTIVKKNGSG 373
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+W+WG G LG G T + AP V P
Sbjct: 374 GMWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 65/216 (30%), Positives = 97/216 (44%)
Query: 10 GGMMSLAI---DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
G +LAI DN + WG+ + ++ +S TP + F G V +VA G
Sbjct: 91 GASHTLAIARFDNVSGVRAWGSNSAGQIGRDPA-TVPTSSTPVKIGGFGG-AVQQVAAGG 148
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKIIETFNQDSPWAVYE 124
H +AL AG T ++WG+N+ GQL L S R P+ +ET P A
Sbjct: 149 LHSMAL--AGGTV-------WAWGSNSAGQLALNPISSATRFAPRQVETAKL--PIAPTA 197
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
+ G H+ T E+ W G +GQLG+GTT S +P++V +LP + +
Sbjct: 198 IVAGGSHSIAYTST-------EAYAW--GNNASGQLGNGTTLSNHMPQKV-QLPSSITIR 247
Query: 185 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 220
+ G H + S G +W+WG G N + T
Sbjct: 248 KISAGGSHNLALDSTGAIWAWG-SNAYGQLGNGTTT 282
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/176 (30%), Positives = 79/176 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWG-NC--PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
I + AGG +LA+D+ GA+W WG N L + +T + V P+ V F +
Sbjct: 246 IRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGF-----I 300
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
V G H VA+ S + Y+WG N G L +G +L P + + + P+
Sbjct: 301 DVFAGPSHSVAVAS--------NFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDAS-NVPF 351
Query: 121 AVYE--VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
E V GSF T + +K + + W +G GQLG GTT + P QV
Sbjct: 352 TDVERVVLLGSFFTIV---KKNGSGGM----WAWGYNGYGQLGDGTTSNRTAPVQV 400
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 93/331 (28%), Positives = 139/331 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVIQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLSVPVV 175
Query: 61 KVACGSEHVVALVSAGETY---KGEDLVCY---SWGANNNGQLGLGDRESRLRPKIIETF 114
KVA G++H+V L G+ Y GE AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGL---ERLLVPKCVMLK 232
Query: 115 NQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
++ S V + CG++ T ++ E + FGL QLG T+S VP+
Sbjct: 233 SRGSRGHVRFQDAFCGAYFTFAISS--------EGHVYGFGLSNYHQLGTQGTESCFVPQ 284
Query: 173 QVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAIS 229
+ V G HT + S G +S G E G LGL A +
Sbjct: 285 NLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAE-------EKSV 337
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 289
P LI P+ VACGA+ VT DG ++++WG G + LGTG+ D ++P
Sbjct: 338 PTLI-------PRLPTVSSVACGASVGYAVTKDG-RVFAWGMGTNYQLGTGQDEDAWSPV 389
Query: 290 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
+ L +++GG + KD E
Sbjct: 390 EMTGKQLENRVVLT-VSSGGQHTVLLVKDKE 419
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 67/217 (30%), Positives = 98/217 (45%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVV 60
Q+ + G S+A+ N G L++WG L G + T SP + G V
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQL----GLRKEQAGTQSPRHLQSLCGIPVA 174
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+++ G H L +G V + WG N+ GQLGLGD R P ++ + +
Sbjct: 175 QISAGGNHSFVLSLSG--------VVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK-- 224
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 180
+ ++CG HTA L +TFG G GQLGH + + P V EL +
Sbjct: 225 -IVSISCGGEHTAALAKG--------GTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--W 273
Query: 181 VYLVS-VDCGLFHTSVVSSAGD--VWSWG--MEKGLG 212
VS V CG HT +VS+A ++S+G M+ LG
Sbjct: 274 GSKVSQVTCGRNHT-LVSTASPKLIYSFGCGMQGQLG 309
Score = 148 (57.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 52/160 (32%), Positives = 73/160 (45%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G N GQLG G T VP V L + +VS+ CG HT+ ++ G V+++G
Sbjct: 193 FGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK-IVSISCGGEHTAALAKGGTVFTFG-SG 250
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G G L N D P L++ G K QV CG HT++ T ++S+
Sbjct: 251 GFG-----QLGHNSFKDEHHPRLVAELW--GSKVS---QVTCGRNHTLVSTASPKLIYSF 300
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPP-LTEEFKQDELNTG 308
G G G LG G+ + P V P +E+ +L G
Sbjct: 301 GCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAG 340
Score = 88 (36.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 37 EGGFSLV--SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNN 94
+GG L+ S SP+ V+++ACG +H +AL + G+ + WG N
Sbjct: 96 DGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFV--------WGENAL 147
Query: 95 GQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLT 136
GQLGL ++ + P+ +++ P V +++ G H+ +L+
Sbjct: 148 GQLGLRKEQAGTQSPRHLQSLC-GIP--VAQISAGGNHSFVLS 187
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 73/241 (30%), Positives = 110/241 (45%)
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V C S H VAL G CY+WG N GQLG GD R RP ++ ++
Sbjct: 61 VATGCASFHCVALDVEGR--------CYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHK- 111
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE--L 177
+ + G HT +++ D +S+ FG + GQLG G+ ++ V +V+ L
Sbjct: 112 --IVKAAAGRNHTVVVS------DDGQSL--GFGWNKYGQLGLGSAKNGFVSVEVESTPL 161
Query: 178 PQYVY--LVSVDCGLFHTSVVSSA--GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 233
P V + +V CG T +SS + + G+ + G + T NE S + +
Sbjct: 162 PCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQ-YGQLGHG--TDNEFNMKDSSVRL 218
Query: 234 SGNGPHGPKF------QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 287
+ PK + V+VACG HTV V +GY +++WG G G LG + D +A
Sbjct: 219 AYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGY-VYTWGFGGYGRLGHREQKDEWA 277
Query: 288 P 288
P
Sbjct: 278 P 278
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 72/274 (26%), Positives = 114/274 (41%)
Query: 15 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 74
+A+D G + WG + G ++ P+ V H +VK A G H V +
Sbjct: 71 VALDVEGRCYTWGR---NEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSD 127
Query: 75 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY-EVT---CGSF 130
G++ G + W N GQLGLG ++ +E + P V EVT CG+
Sbjct: 128 DGQSL-G-----FGW--NKYGQLGLGSAKNGFVS--VEVESTPLPCVVSDEVTNVACGAD 177
Query: 131 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-------SALVPEQVKELPQYVY- 182
T L+ + + + T GL + GQLGHGT S + + + P+ +
Sbjct: 178 FTVWLSSTEGASIL------TAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIAS 231
Query: 183 -----LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 237
+V V CG HT V G V++WG G G L E D +P I
Sbjct: 232 LAGETIVKVACGTNHTVAVDKNGYVYTWGFG-GYG-----RLGHREQKDEWAPRRIDVFQ 285
Query: 238 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 271
+ + + ++ G+A++ T G +L+ WG+
Sbjct: 286 RNNVLPPNAI-LSAGSANSAC-TAGGGQLYMWGK 317
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 142 (55.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 57/215 (26%), Positives = 91/215 (42%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVA 63
+ G + + G L+M+G S+ G L S T P+ V
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFG------SNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV 95
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPWAV 122
CG H + G Y G N+ GQLGLGD E R +I F NQ +
Sbjct: 96 CGRNHTLVYTEKGNVYAA--------GGNSEGQLGLGDTEERTTFHLISFFTNQHK---I 144
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
++ GS+ +A +T + + +G GQ+G VP QV ++ + V
Sbjct: 145 KQLAAGSYTSAAVTE--------DGQLFVWGDNSEGQIGLADKTCVSVPCQV-DVGKPVS 195
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP 215
S+ CG +H++ ++ G+++++G E G LGL P
Sbjct: 196 --SISCGYYHSAFITGDGELYTFGEPENGKLGLLP 228
Score = 141 (54.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 51/160 (31%), Positives = 79/160 (49%)
Query: 58 TVVKVACGSE--HVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRE---SRLRPK 109
T V V C + V+ +S G + D Y++G NG+LGL + SR+
Sbjct: 180 TCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQP 239
Query: 110 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SA 168
++ + V +V CG HT +LT E+ +TFGLG+ GQLGHGT
Sbjct: 240 VLGIMEK-----VNKVACGGEHTVVLT---------ETGVYTFGLGQYGQLGHGTLLFKT 285
Query: 169 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSA--GDVWSWG 206
VP+ VK L + + +V CG HT+V++ G ++++G
Sbjct: 286 SVPKSVKHLRSHK-IHNVTCGESHTAVIADTENGLMFTFG 324
Score = 120 (47.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+ + +G GQ+G VP QV ++ + V S+ CG +H++ ++ G+++++
Sbjct: 160 DGQLFVWGDNSEGQIGLADKTCVSVPCQV-DVGKPVS--SISCGYYHSAFITGDGELYTF 216
Query: 206 GM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 263
G E G LGL P L + + I+ N +VACG HTV++T+ G
Sbjct: 217 GEPENGKLGLLPE-QLKNSRVPQPVLGIMEKVN-----------KVACGGEHTVVLTETG 264
Query: 264 YKLWSWGRGRSGVLGTG 280
++++G G+ G LG G
Sbjct: 265 --VYTFGLGQYGQLGHG 279
Score = 108 (43.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 30 PLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVC 86
P+P+S F S+F PS W F V ++CG EH + G+ Y
Sbjct: 9 PVPESGAVFTFGK-SNFAENIPSKFW-FKNDKPVHISCGDEHTAVVTGNGKLYM------ 60
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
+G+N+ GQLGLG + + +P ++ P CG HT + T +
Sbjct: 61 --FGSNDWGQLGLGSKNTVRKPTCVKALK---PEKTKLAVCGRNHTLVYTEK 107
Score = 106 (42.4 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKE--LPQYVYLV-----SVDCGLFHTSVVSSAGDV 202
+TFG ENG+LG L+PEQ+K +PQ V + V CG HT V++ G V
Sbjct: 214 YTFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-V 265
Query: 203 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD- 261
+++G+ + L L + ++ + H K + V CG +HT ++ D
Sbjct: 266 YTFGLGQYGQLGHGTLLFKTSVPKSVKHLR-----SH--KIHN---VTCGESHTAVIADT 315
Query: 262 DGYKLWSWGRGRSGVLGTGKT--IDFFAPAI 290
+ ++++G GR G LG G+ + F PA+
Sbjct: 316 ENGLMFTFGDGRHGKLGLGEENFANQFDPAL 346
Score = 52 (23.4 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 298 EEFKQDELNTGGLDD------EIKTKDLEGAEERDEKLSSAMEEMKLLQSKL 343
EE + +E+ GG ++ E + +D EG EER+E+ ++ +++ +KL
Sbjct: 634 EEEEVEEVEEGGNEEDEDEGQEEEEEDREG-EEREEEEEKTKDKRRIVNNKL 684
Score = 51 (23.0 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 295 PLTEEFKQDELNTGGL---DDEIKTKDLEGAEERDEKLSSAMEEMKL 338
P+ ++ K++E GG D+E + K+ E EE +E A EE +L
Sbjct: 525 PVQKQKKEEE--EGGNEEEDEEEEDKEEEEGEEMEEDEGKAEEEQEL 569
Score = 49 (22.3 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 335
E+ +Q+E GG ++E + EG E DE EE
Sbjct: 621 EKREQEEEEEGGEEEEEVEEVEEGGNEEDEDEGQEEEE 658
Score = 49 (22.3 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 298 EEFKQDELNTGGLDDE---IKTKDLEGAEERDEKLSSAMEE 335
+E + +E N G+++E I+ +++EGA+E E+ A EE
Sbjct: 567 QELELEEENEEGVEEEEEEIEEEEVEGADE--EEGEGAEEE 605
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMK 337
EE ++DE G ++E ++LE EE +E + EE++
Sbjct: 554 EEMEEDE---GKAEEE---QELELEEENEEGVEEEEEEIE 587
Score = 41 (19.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDE 327
EE +++E G + + ++ EG EE +E
Sbjct: 608 EESQKEEKEEGEEEKREQEEEEEGGEEEEE 637
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 159 (61.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 64/227 (28%), Positives = 97/227 (42%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
+ G S + L+M+G+ G S +S P+ V V ACG
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGL-GSKSAISK--PTCVKALKPEKVKLAACGR 96
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
H + G Y + G NN GQLGLGD E R +I F + + +++
Sbjct: 97 NHTLVSTEGGNVY--------ATGGNNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLS 146
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 186
GS +A LT R W G GQ+G + VP+QV + + V +S
Sbjct: 147 AGSNTSAALTEDGR------LFMW--GDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWIS- 196
Query: 187 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPI 231
CG +H++ V++ G+++ +G E G LGL PN L + +S I
Sbjct: 197 -CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLLGNHRTPQLVSEI 241
Score = 136 (52.9 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 46/133 (34%), Positives = 76/133 (57%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
F G+N GQ+G + VP+QV + + V +S CG +H++ V++ G+++ +G E
Sbjct: 162 FMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPE 218
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL PN L G+ +P L+S P + +QVACG HTV++T++ ++
Sbjct: 219 NGKLGL-PNQLL-----GNHRTPQLVS----EIP--EKVIQVACGGEHTVVLTENA--VY 264
Query: 268 SWGRGRSGVLGTG 280
++G G+ G LG G
Sbjct: 265 TFGLGQFGQLGLG 277
Score = 134 (52.2 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 49/150 (32%), Positives = 77/150 (51%)
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPWAVYEVTCGSFH 131
SA T GE Y +G NG+LGL ++ + P+++ + P V +V CG H
Sbjct: 202 SAFVTTDGE---LYVFGEPENGKLGLPNQLLGNHRTPQLVS----EIPEKVIQVACGGEH 254
Query: 132 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKELPQYVYLVSVD 187
T +LT E+ +TFGLG+ GQLG GT T V E +++ Q + +S
Sbjct: 255 TVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD--QTISYIS-- 301
Query: 188 CGLFHTSVVSSAGDVWSWGMEK----GLGL 213
CG HT++++ G ++++G + GLGL
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
Score = 114 (45.2 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 150 WTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+ FG ENG+LG + + P+ V E+P+ V + V CG HT VV + V+++G+
Sbjct: 212 YVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHT-VVLTENAVYTFGL 268
Query: 208 EK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
+ G LGL L I I + Q ++CG HT L+TD G
Sbjct: 269 GQFGQLGL--GTFLFETSEPKVIENI----------RDQTISYISCGENHTALITDIGL- 315
Query: 266 LWSWGRGRSGVLGTG 280
++++G GR G LG G
Sbjct: 316 MYTFGDGRHGKLGLG 330
Score = 108 (43.1 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 61
+I + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVTI--GKPVSW 194
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 119
++CG H SA T GE Y +G NG+LGL ++ + P+++ + P
Sbjct: 195 ISCGYYH-----SAFVTTDGE---LYVFGEPENGKLGLPNQLLGNHRTPQLVS----EIP 242
Query: 120 WAVYEVTCGSFHTALLT 136
V +V CG HT +LT
Sbjct: 243 EKVIQVACGGEHTVVLT 259
Score = 103 (41.3 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 34/108 (31%), Positives = 50/108 (46%)
Query: 31 LPDSSTEGGF--SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYS 88
+PDS F S + P W F V ++CG EH A+V+ G + + Y
Sbjct: 8 MPDSGAVFTFGKSKFAENNPGKFW-FKNDVPVHLSCGDEHS-AVVT------GNNKL-YM 58
Query: 89 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
+G+NN GQLGLG + + +P ++ P V CG HT + T
Sbjct: 59 FGSNNWGQLGLGSKSAISKPTCVKALK---PEKVKLAACGRNHTLVST 103
Score = 87 (35.7 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 144 MLESMCWTFGLGENGQLGHGT----TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+ E+ +TFGLG+ GQLG GT T V E +++ Q + +S CG HT++++
Sbjct: 258 LTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD--QTISYIS--CGENHTALITDI 313
Query: 200 GDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 255
G ++++G + GLGL N I P L S + +F + VACG H
Sbjct: 314 GLMYTFGDGRHGKLGLGL-------ENFTNHFI-PTLCS----NFLRFIVKL-VACGGCH 360
Query: 256 TVL 258
V+
Sbjct: 361 MVV 363
Score = 44 (20.5 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 299 EFKQDELNTGGLDDEI-KTKDLEGAEERDEKLSSAMEEMK--LLQSKLSVMERYASILHG 355
E D+L D E KT++L+ E+ DE++++ E K + SV Y S G
Sbjct: 829 EILSDDLTDKAEDHEFSKTEELK-LEDVDEEINAENVESKKKTVGDDESVPTGYHSKTEG 887
Query: 356 SIFGKPFAAEQDIP----ISLKDMGFFDITKEWEN-MLESADRSKLVRLE 400
+ ++ + I +L++ + + + ML+ AD S L LE
Sbjct: 888 AERTNDDSSAETIEKKEKANLEERAICEYNENPKGYMLDDADSSSLEILE 937
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 79/280 (28%), Positives = 129/280 (46%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G + + + + G + +G+ GG + +S P+ V G+ +V+VACG+
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGS-NGCLGHGGLNDISQ--PTIVEALLGYEMVQVACGA 458
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPWAVYEV 125
HV+AL + E + +WG + G+LGLG RES P+ + Q++ + +
Sbjct: 459 SHVLALSTERELF--------AWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGI 510
Query: 126 TCGSFHT----ALLTHRKRPNDM-LESMCWTFGLGENGQLGHGTTQSAL--VPEQVKELP 178
T AL R N + L+ + LGE L H + AL P L
Sbjct: 511 DSSVILTVPGQALACGSNRFNKLGLDHL----SLGEEPAL-HQQVEEALNFTPLGSAPLD 565
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
Q L+SVD G H++ V+++GD +++G + + L N + +P + G
Sbjct: 566 QEP-LLSVDLGTAHSAAVTASGDCYTFGSNQ------HGQLGTNARRVSRAPCQVQGL-- 616
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
G K VACG A TV + +G +++SWG+G G LG
Sbjct: 617 QGIKI---AMVACGDAFTVAIGAEG-EVYSWGKGARGRLG 652
Score = 175 (66.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 81/290 (27%), Positives = 120/290 (41%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDF---- 54
+++ V AG + +G L +W PL GG L V P V F
Sbjct: 338 TEVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGALLPGAVEQQQPQFVSRFLEGQ 394
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 395 SGVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGGLNDISQPTIVEAL 446
Query: 115 NQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 173
+ + +V CG+ H AL T R E W G G+ G+LG GT +S P+Q
Sbjct: 447 ---LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDGGRLGLGTRESHSCPQQ 494
Query: 174 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEA-GDAISP 230
V +P V CG+ + +++ G + G + LGL + SL A +
Sbjct: 495 VP-MPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGL-DHLSLGEEPALHQQVEE 552
Query: 231 ILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
L P Q+P+ V G AH+ VT G +++G + G LGT
Sbjct: 553 ALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASG-DCYTFGSNQHGQLGT 601
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 190 (71.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/207 (28%), Positives = 101/207 (48%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH--RKRPNDM 144
+++G G LG G+RES PK +++ N +V C +HTA + + M
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQSLNG---LKTVKVACSIWHTAAIVEVMGQTATSM 436
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+T+G G+ +LGHG ++ L+P V L Y + + CG T ++++G V++
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH-KIACGHTFTVALTTSGHVFT 495
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
G G + L N D P L+ G +F + ++ACGA H ++T
Sbjct: 496 MG-----GTA-HGQLG-NSISDGKLPCLVQDRLV-G-EFVE--EIACGAHHVAVLTSRS- 543
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++++WG+G +G LG G T D P +V
Sbjct: 544 EVFTWGKGANGRLGHGDTEDKRTPTLV 570
Score = 166 (63.5 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 75/304 (24%), Positives = 131/304 (43%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS--LVSSFTPSPVWDFHGHT 58
+S S +GG I++ G +++WG +G S V + +P +
Sbjct: 191 VSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPR-PLESNV 249
Query: 59 VVKV--ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
V+ V VALV T +GE ++WG G+LG G + RPK++E
Sbjct: 250 VLDVHQIVCGVRHVALV----TRQGE---VFTWGEEVGGRLGHGIQVDISRPKLVEFLAL 302
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ + V CG +HT +++ D+ W G+ G LGHG+ S +P++V
Sbjct: 303 TN---IDFVACGEYHTCVVS---TSGDLFS---WGDGIHNVGLLGHGSDISHWIPKRVSG 353
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 236
+ + ++SV CG +H+++ ++ G ++++G + G+ + N + + S N
Sbjct: 354 PLEGLQVLSVACGTWHSALATANGKLFTFG-DGAFGVLGHG----NRESVSYPKEVQSLN 408
Query: 237 GPHGPKFQDPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFA 287
G V+VAC HT + + KL++WG G LG G +
Sbjct: 409 G------LKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL 462
Query: 288 PAIV 291
P V
Sbjct: 463 PTCV 466
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 42/147 (28%), Positives = 66/147 (44%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
WT G+ +G + T ++ ++ + E + + + CG+ H ++V+ G+V++WG E
Sbjct: 220 WTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEV 279
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G L D P L+ F VACG HT +V+ G L+SW
Sbjct: 280 G------GRLGHGIQVDISRPKLVEFLALTNIDF-----VACGEYHTCVVSTSG-DLFSW 327
Query: 270 GRG--RSGVLGTGKTIDFFAPAIVLWP 294
G G G+LG G I + P V P
Sbjct: 328 GDGIHNVGLLGHGSDISHWIPKRVSGP 354
Score = 121 (47.7 bits), Expect = 0.00079, P = 0.00079
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 65
+ G ++A+ +G ++ G + + G S+ P V D G V ++ACG
Sbjct: 477 IACGHTFTVALTTSGHVFTMGGT----AHGQLGNSISDGKLPCLVQDRLVGEFVEEIACG 532
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
+ HV L S E + +WG NG+LG GD E + P ++E V +
Sbjct: 533 AHHVAVLTSRSEVF--------TWGKGANGRLGHGDTEDKRTPTLVEALRDRH---VKSL 581
Query: 126 TCGSFHTALLTHRKRPNDMLESMC 149
+CGS T+ + K + +S+C
Sbjct: 582 SCGSNFTSSICIHKWVSGADQSIC 605
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 173 (66.0 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 63/202 (31%), Positives = 94/202 (46%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVV 70
+L +N G L+M+G S+ G L + T P+ V V ACG H +
Sbjct: 49 ALVTEN-GKLFMFG------SNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTL 101
Query: 71 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 130
S G Y C G NN GQLGLGD R ++E FN+ P + + GS
Sbjct: 102 VFTSRGNLY-----AC---GGNNEGQLGLGDCNDRTSFHLVEFFNKQGP--IKMLAAGSN 151
Query: 131 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 190
+A LT R + +G GQ+G G +AL P++V + + V+ VS CG
Sbjct: 152 TSAALTQDGR--------LYMWGDNSEGQIGLGKESNALTPQEVS-VGKRVFWVS--CGY 200
Query: 191 FHTSVVSSAGDVWSWGMEKGLG 212
+H++ V+ G ++++G EK G
Sbjct: 201 YHSAFVTVDGALYTFG-EKDSG 221
Score = 137 (53.3 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 202
++ +TFG ++G+LG T + A VP+QV ++P V V V CG HT V + +V
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV--VQVACGGGHT-VALTENEV 264
Query: 203 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
+S+G+ + G + + + G H ACG HT L+TD+
Sbjct: 265 YSFGLGQ-FGQLGHGTFIFESRLPRVVEHFRKGRVKHA---------ACGENHTALITDN 314
Query: 263 GYKLWSWGRGRSGVLGTGK 281
G L+++G GR G LG G+
Sbjct: 315 GL-LYTFGDGRHGKLGLGE 332
Score = 134 (52.2 bits), Expect = 6.4e-11, Sum P(3) = 6.4e-11
Identities = 47/155 (30%), Positives = 81/155 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-ME 208
+ +G GQ+G G +AL P++V + + V+ VS CG +H++ V+ G ++++G +
Sbjct: 163 YMWGDNSEGQIGLGKESNALTPQEVS-VGKRVFWVS--CGYYHSAFVTVDGALYTFGEKD 219
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL L ++ ++ I P VQVACG HTV +T++ +++
Sbjct: 220 SGKLGLSTE-KLANHKVPQQVTDI---------P--DRVVQVACGGGHTVALTEN--EVY 265
Query: 268 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 302
S+G G+ G LG G I F + P + E F++
Sbjct: 266 SFGLGQFGQLGHGTFI--FESRL---PRVVEHFRK 295
Score = 131 (51.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 83 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 142
D Y++G ++G+LGL E K+ + D P V +V CG HT LT
Sbjct: 209 DGALYTFGEKDSGKLGLST-EKLANHKVPQQVT-DIPDRVVQVACGGGHTVALT------ 260
Query: 143 DMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
E+ ++FGLG+ GQLGHGT +S L P V+ + + CG HT++++ G
Sbjct: 261 ---ENEVYSFGLGQFGQLGHGTFIFESRL-PRVVEHFRKG-RVKHAACGENHTALITDNG 315
Query: 201 DVWSWG 206
++++G
Sbjct: 316 LLYTFG 321
Score = 104 (41.7 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 31/100 (31%), Positives = 47/100 (47%)
Query: 39 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
G S + PS W ++++CG EH ALV T G+ + +G+NN GQLG
Sbjct: 19 GKSKFADNAPSKFW-LKNDVPLRISCGDEHT-ALV----TENGK---LFMFGSNNWGQLG 69
Query: 99 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
LG + + +P ++ + V CG HT + T R
Sbjct: 70 LGTKTTVNKPTCVKALKSER---VKLTACGRTHTLVFTSR 106
Score = 45 (20.9 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 335
+E + DE T D+E + + E EE + K+ EE
Sbjct: 1258 QEDESDE-ETSDKDEEEEESENEEEEEEESKVEEEEEE 1294
Score = 44 (20.5 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 297 TEEFKQDELNTGGLDDEIKTKDLEGAEERDE 327
T E +E + D+E + EG EE E
Sbjct: 1225 TSEEDDEEQESSSEDEEKSESEAEGEEEESE 1255
Score = 42 (19.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 302 QDELNTGGLDDEI--KTKDLEGAEERDEKLSSAMEEMKL 338
++E + G +DE +T D + EE E EE K+
Sbjct: 1250 EEEESEGDQEDESDEETSDKDEEEEESENEEEEEEESKV 1288
Score = 42 (19.8 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEE---RDEKLSSAMEE 335
EE Q+E G D+E + ++ E E+ + EK SS +++
Sbjct: 1325 EEDTQEEEQENGDDEEEEEEEEEEKEKTKTKREKASSRLQK 1365
Score = 41 (19.5 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 301 KQDELNTGGLDDEIKTKDLEGAEERDEK 328
+ D+ + G DD+ KD EE +E+
Sbjct: 976 ENDDDSEGDEDDDTMIKDSSEEEESEEE 1003
Score = 41 (19.5 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 299 EFKQDEL--NTGGLDDEIKTKDLEGAEERDEKLSSAMEE 335
E ++DE NT DDE + E EE+ E + EE
Sbjct: 1215 EAEEDETGENTSEEDDEEQESSSED-EEKSESEAEGEEE 1252
Score = 40 (19.1 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGA------EERDEKLSSAME 334
EE D N D+E + K+ + A EE +EK S+++
Sbjct: 1048 EEKSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSGSSVK 1090
Score = 40 (19.1 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSK 342
EE +E + G +++ +T+D+E ++ + + EE++ SK
Sbjct: 926 EEESDEEESEGSVNERDETEDVEESDGLGNRRDKS-EEVEDSDSK 969
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 335
EE K T L+ E + + + EE+ E +S +E
Sbjct: 1128 EEQKSKSEATDDLESEEEEDNEDNEEEKSETSASTEDE 1165
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 127 (49.8 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 52/182 (28%), Positives = 76/182 (41%)
Query: 38 GGFSLVSSFTPSPVWDFHGHTVVK--------VACGSEHVVALVSAGETYKGEDLVCYSW 89
G L SS P D + TVV ++ G H +A+ S+GE + +W
Sbjct: 55 GALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSGEIW--------AW 106
Query: 90 GANNNGQLGL----GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
G N+ GQLG R+SR PK +E + A + G A+ D
Sbjct: 107 GRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAF--ASGVVSAAI-------GD-- 155
Query: 146 ESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+ W +G + GQLG G A VP +V+ L ++V V G H ++ G V+
Sbjct: 156 DGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE-HVVKVSLGWGHALALTVDGKVFG 214
Query: 205 WG 206
WG
Sbjct: 215 WG 216
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 44/141 (31%), Positives = 63/141 (44%)
Query: 151 TFGLGENGQLG------HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+FG G G LG G A P V LP + S+ G +H+ V+S+G++W+
Sbjct: 48 SFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDIS--SISAGHYHSLAVTSSGEIWA 105
Query: 205 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
WG ++G LG S +R+ + P + G Q A G + + DD
Sbjct: 106 WGRNDEGQLGRIVIDS-SRDSRSE---PKRVEGL--ENVNVQ--AAFASGVV-SAAIGDD 156
Query: 263 GYKLWSWGRGRSGVLGTGKTI 283
G LW WGR + G LG G I
Sbjct: 157 G-SLWVWGRSKRGQLGLGNGI 176
Score = 103 (41.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 34/117 (29%), Positives = 60/117 (51%)
Query: 80 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 139
+GE + SWG N + QLG G E+ P+ +E F+ +SP +V + G H+ +T +
Sbjct: 352 RGERNIL-SWGWNRSRQLGRGKPENL--PREVEGFDGESPASV---SAGRVHSLCVTEKG 405
Query: 140 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
W +G G+NG+LG G++ P ++++ V L +V G H+ ++
Sbjct: 406 E--------AWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCV-LQAV-AGFDHSLIL 452
Score = 102 (41.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 184 VSVDCGLFHTSVVSSAGD----VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+S+ GL H+ + + G+ W W + LG +L R G G
Sbjct: 337 ISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPREVEG-------FDG---- 385
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ P V+ G H++ VT+ G + W WG G++G LG G + D P ++
Sbjct: 386 ----ESPASVSAGRVHSLCVTEKG-EAWVWGCGKNGRLGLGSSSDEPEPMLL 432
Score = 102 (41.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 39/137 (28%), Positives = 61/137 (44%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S I S+ AG SLA+ ++G +W WG + + G ++ S S +
Sbjct: 82 SDISSISAGHYHSLAVTSSGEIWAWGR----NDEGQLGRIVIDSSRDSRSEPKRVEGLEN 137
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 119
V + +VSA G+D + WG + GQLGLG+ E+R+ P +E +
Sbjct: 138 VNVQAAFASGVVSAAI---GDDGSLWVWGRSKRGQLGLGNGIIEARV-PSRVENLAAEH- 192
Query: 120 WAVYEVTCGSFHTALLT 136
V +V+ G H LT
Sbjct: 193 --VVKVSLGWGHALALT 207
Score = 98 (39.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
A G++S AI + G+LW+WG G ++ + PS V + VVKV+ G H
Sbjct: 145 ASGVVSAAIGDDGSLWVWGRSKRGQLGLGNG--IIEARVPSRVENLAAEHVVKVSLGWGH 202
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLG 98
+AL G+ + WG +G++G
Sbjct: 203 ALALTVDGKVF--------GWGYVADGRVG 224
Score = 55 (24.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ACG+ H++++ DG L S G G LG K
Sbjct: 291 IACGSDHSLILCHDG-TLLSAGSNIYGQLGRSK 322
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 187 (70.9 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 51/125 (40%), Positives = 66/125 (52%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
YSWG N+ GQLGLG P +IE + V + CG HTALLT +
Sbjct: 212 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK---VEFLACGGSHTALLTK--------D 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL-FHT-SVVSSAGDVWS 204
+ +TFG G+ GQLGH +TQ+ L P V EL + V CG +HT + VS G V+S
Sbjct: 261 GLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN-RVTQVACGSRWHTLAYVSDLGKVFS 319
Query: 205 WGMEK 209
+G K
Sbjct: 320 FGSGK 324
Score = 161 (61.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 180
++ ++TCG +H+ L+ + E W G +GQLG G +++ Q+ E
Sbjct: 136 SIIQITCGDYHSLALSKGQGG----ELFAW--GQNLHGQLGVGRLFTSIPTPQLVEHLSG 189
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
V LV + G H+ +S +G+++SWG LG L D P LI
Sbjct: 190 VPLVQISAGKAHSMALSMSGNIYSWG-RNDLG---QLGLGHTNGEDF--PSLIEALDNQK 243
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+F +ACG +HT L+T DG ++++G G+ G LG T + P +V
Sbjct: 244 VEF-----LACGGSHTALLTKDGL-VFTFGAGKYGQLGHNSTQNELRPRLV 288
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 45/135 (33%), Positives = 58/135 (42%)
Query: 4 ICSVKAGGMMSLAIDNA--GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
I + G SLA+ G L+ WG L G S TP V G +V+
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQ-NLHGQLGVGRL-FTSIPTPQLVEHLSGVPLVQ 194
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
++ G H +AL +G Y SWG N+ GQLGLG P +IE +
Sbjct: 195 ISAGKAHSMALSMSGNIY--------SWGRNDLGQLGLGHTNGEDFPSLIEALDNQK--- 243
Query: 122 VYEVTCGSFHTALLT 136
V + CG HTALLT
Sbjct: 244 VEFLACGGSHTALLT 258
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 47/168 (27%), Positives = 89/168 (52%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 116
+++++ CG H +AL S G+ G +L ++WG N +GQLG+G + + P+++E +
Sbjct: 136 SIIQITCGDYHSLAL-SKGQ---GGEL--FAWGQNLHGQLGVGRLFTSIPTPQLVEHLS- 188
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
P + +++ G H+ L+ + +++G + GQLG G T P ++
Sbjct: 189 GVP--LVQISAGKAHSMALS--------MSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA 238
Query: 177 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 223
L Q V ++ CG HT++++ G V+++G K L N+ T+NE
Sbjct: 239 LDNQKVEFLA--CGGSHTALLTKDGLVFTFGAGKYGQLGHNS--TQNE 282
Score = 130 (50.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 49/154 (31%), Positives = 79/154 (51%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+++G + GQLG G T P ++ L Q V ++ CG HT++++ G V+++G
Sbjct: 212 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLA--CGGSHTALLTKDGLVFTFGAG 269
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA-HTVLVTDDGYKLW 267
K L N+ T+NE + P L++ G + QVACG+ HT+ D K++
Sbjct: 270 KYGQLGHNS--TQNE----LRPRLVTELA--GNRV---TQVACGSRWHTLAYVSDLGKVF 318
Query: 268 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 301
S+G G+ G LG G T + P + + P EE K
Sbjct: 319 SFGSGKEGQLGNGGTHNQLIP-LPMKLPSNEELK 351
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 193 (73.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 58 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 3339 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 3390
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 3391 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 3439
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 206
L Y + V CGL HT VS+ G VW++G
Sbjct: 3440 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 3469
Score = 172 (65.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 3413 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 3462
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 3463 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 3521
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 3522 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 3569
Query: 267 WSWGRGRSGVLGTGKTIDFFAPAIV 291
++WG G LG G T P +V
Sbjct: 3570 YAWGSNSEGQLGLGHTNHVREPTLV 3594
Score = 150 (57.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 3361 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 3419
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 3420 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 3466
Query: 268 SWGRGRSGVLGTGKT 282
++G G G LG G +
Sbjct: 3467 AFGDGDYGKLGLGNS 3481
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 161 (61.7 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 83/340 (24%), Positives = 140/340 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGHTV 59
++ + A MS A+ + G ++ WG + GF + TP V F + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGIL--GFYQDKIKIQKTPWKVPTFSKYNI 223
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V++A G +H++ L G + ++WG QLG E R R K ++
Sbjct: 224 VQLAPGKDHILFLDEEG--------MVFAWGNGQQNQLGRKVME-RFRLKTLDPRPFGLR 274
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVK-E 176
Y + G H LT + N ++ W GL + GQ G ALV + +
Sbjct: 275 HVKY-IASGENHCFALT---KDNKLVS---W--GLNQFGQCGVSEDVEDGALVTKPKRLA 325
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPIL 232
LP V + S+ G H+ ++S GD++S G E G+ T + +
Sbjct: 326 LPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP 385
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
+ + PKF+ VA G+ H+V V +G +SWG G + +G G D +
Sbjct: 386 LPTKLNNVPKFKS---VAAGSHHSVAVAQNGIA-YSWGFGETYAVGLGPFEDDTEVPTRI 441
Query: 293 WPPLTEEFKQDELNTGG---LDDEIKTKDLEGAEERDEKL 329
T++ + GG + +K D E AE+R +++
Sbjct: 442 KNTATQDHNIILVGCGGQFSVSGGVKLSD-EDAEKRADEM 480
Score = 64 (27.6 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWG 27
++I S GGM +LA+D +W WG
Sbjct: 84 AKIISFAVGGMHTLALDEESNVWSWG 109
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 183 (69.5 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 84/307 (27%), Positives = 130/307 (42%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF------- 54
+++ V AG + +G L +W PL GG SL+ P F
Sbjct: 332 TEVVQVAAGRTQKAGVTRSGRLILWEAPPLG----AGGGSLLPGAVEQPQPQFISRFLEG 387
Query: 55 -HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 388 QSGVTIKHVACGDFFTACLTDRG--------IIMTFGSGSNGCLGHGSLTDISQPTIVEA 439
Query: 114 FNQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 172
+ + +V CG+ H AL T R E W G G++G+LG GT +S P+
Sbjct: 440 L---LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDSGRLGLGTRESHSCPQ 487
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASL-----TRNEAG 225
QV +P V CG+ + +++ G + G + LGL + SL +
Sbjct: 488 QVP-MPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DHLSLGEEPVPHQQVE 545
Query: 226 DAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
+A+S L+ G+ P Q+P+ + G AH+ VT G +++G + G LGT
Sbjct: 546 EALSFTLL-GSAPLD---QEPLLSIDLGTAHSAAVTASG-DCYTFGSNQHGQLGTNTRRG 600
Query: 285 FFAPAIV 291
AP V
Sbjct: 601 SRAPCKV 607
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 63/238 (26%), Positives = 102/238 (42%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKII 111
D T+V+ G E V A + ++WG ++G+LGLG RES P+ +
Sbjct: 430 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQV 489
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
V CG + +LT P L C + + G L H + VP
Sbjct: 490 P---MPPGQEAQRVVCGIDSSMILTV---PGQALA--CGSNRFNKLG-LDHLSLGEEPVP 540
Query: 172 -EQVKELPQYVYL----------VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 220
+QV+E + L +S+D G H++ V+++GD +++G + + L
Sbjct: 541 HQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQ------HGQLG 594
Query: 221 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
N + +P + G G K VACG A TV + + +++SWG+G G LG
Sbjct: 595 TNTRRGSRAPCKVQGL--EGIKM---AMVACGDAFTVAIGAES-EVYSWGKGARGRLG 646
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 55/212 (25%), Positives = 88/212 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G LA+ L+ WG DS G + S P V G +V
Sbjct: 444 EMVQVACGASHVLALSTERELFAWGR---GDSGRLGLGTRESHSCPQQVPMPPGQEAQRV 500
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNG--QLGLGDR---ESRLRPKIIETFNQD 117
CG + + L T G+ L C S N G L LG+ ++ + T
Sbjct: 501 VCGIDSSMIL-----TVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGS 555
Query: 118 SPW---AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
+P + + G+ H+A +T D C+TFG ++GQLG T + + P +V
Sbjct: 556 APLDQEPLLSIDLGTAHSAAVT---ASGD-----CYTFGSNQHGQLGTNTRRGSRAPCKV 607
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+ L + + + V CG T + + +V+SWG
Sbjct: 608 QGL-EGIKMAMVACGDAFTVAIGAESEVYSWG 638
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 182 (69.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 75/278 (26%), Positives = 122/278 (43%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G + + + + G + +G+ + G SL P+ V G+ +V+VACG+
Sbjct: 405 VACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 461
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
HV+AL + E + +WG + G+LGLG RES P+ + + V
Sbjct: 462 SHVLALSTERELF--------AWGRGDGGRLGLGTRESHSCPQQV---SMPPGQEAQRVV 510
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP------QY 180
CG + +LT R + GL + LG + V E + P
Sbjct: 511 CGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEEALSFTPLGSAPFDR 569
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
L+SVD G H++ V+++GD +++G + + L N + +P + G
Sbjct: 570 EPLLSVDLGTAHSAAVTASGDCYTFGSNQ------HGQLGTNARRVSRAPCQVQGL--QN 621
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
K VACG A TV V +G +++SWG+G G LG
Sbjct: 622 IKI---AMVACGDAFTVAVGAEG-EVYSWGKGARGRLG 655
Score = 174 (66.3 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 82/291 (28%), Positives = 122/291 (41%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDF---- 54
+++ V AG + +G L +W PL GG L V P V F
Sbjct: 341 TEVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGALLPGAVEQQQPQFVSRFLEGQ 397
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 398 SGVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGSLNDISQPTIVEAL 449
Query: 115 NQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 173
+ + +V CG+ H AL T R E W G G+ G+LG GT +S P+Q
Sbjct: 450 ---LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDGGRLGLGTRESHSCPQQ 497
Query: 174 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPI 231
V +P V CG+ + +++ G + G + LGL SL A +
Sbjct: 498 VS-MPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEE 555
Query: 232 LISGNGPHG--PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
+S P G P ++P+ V G AH+ VT G +++G + G LGT
Sbjct: 556 ALSFT-PLGSAPFDREPLLSVDLGTAHSAAVTASG-DCYTFGSNQHGQLGT 604
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 92/334 (27%), Positives = 140/334 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLDMPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTTDGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ S V + CG++ T ++ E + FGL QLG T S
Sbjct: 230 LLKSRGSRGRVRFQDAFCGAYLTFAISR--------EGHVYGFGLSNYHQLGTPGTASCF 281
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGD 226
+P+ + V G HT + S G +S G E G LGL A +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAE-------E 334
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 286
P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D +
Sbjct: 335 KSIPTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQDEDAW 386
Query: 287 APAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
+P + L +++GG + KD E
Sbjct: 387 SPVEMTGKQLENRVVLT-VSSGGQHTVLLVKDKE 419
Score = 118 (46.6 bits), Expect = 0.00050, P = 0.00050
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 25 VSHRSHKTE--PGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
++ +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLNQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +T+DG +++ WG R +GV+G
Sbjct: 130 HTAALTEDG-RVFLWGSFRDNNGVIG 154
Score = 116 (45.9 bits), Expect = 0.00082, P = 0.00082
Identities = 76/295 (25%), Positives = 116/295 (39%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 58
+ + +AGGM ++ ++ +G ++ +G C D G + V S P V +
Sbjct: 66 LQDVVQAEAGGMHTVCLNQSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 120
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQ 116
VV+V+ G H AL G + WG+ +NNG +GL E + +
Sbjct: 121 VVQVSAGDSHTAALTEDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQL 170
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQL-----GHGTTQSALV 170
D P V +V G+ H +LT D+ C G LG +L G + LV
Sbjct: 171 DMP--VVKVASGNDHLVMLT---TDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 171 PEQV--KELPQY--VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
P+ V K V CG + T +S G V+ +G+ L T A
Sbjct: 226 PKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLG-----TPGTASC 280
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
I L S + V + G HT+ + +G K +S GR G LG G+
Sbjct: 281 FIPQNLTSFKN----STKSWVGFSGGQHHTICMDSEG-KAYSLGRAEYGRLGLGE 330
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 187 (70.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 60/192 (31%), Positives = 95/192 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
YSWGA+ GQLGLGD P + + + V ++ GS H A+LT K ++L
Sbjct: 878 YSWGASEYGQLGLGDVTQHSSPMQVSALEK---YNVLQIASGSTHCAVLTTSK---EVL- 930
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
FG G +G + S +P V L +Y+++ + CG + T+ ++ GDV++WG
Sbjct: 931 ----VFGNG--AAMGAASVVS--LPTLVPSL-KYLHIDRLCCGHYSTAAITECGDVYTWG 981
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
+ LG N++ T SP LI + Q Q++CG HT +TD G ++
Sbjct: 982 TGQELGHGGNSTET--------SPKLIEAL-----RNQSIRQISCGGRHTAFLTDSG-RI 1027
Query: 267 WSWGRGRSGVLG 278
++ G+ G LG
Sbjct: 1028 FTCGKDSFGQLG 1039
Score = 171 (65.3 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 71/256 (27%), Positives = 120/256 (46%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLV----SSFTPSPVWDFHGHTVVKVACGSEHV 69
++ +D + L WG+ S+ + GF + S TP + +F+ + ++ GS +
Sbjct: 706 AIHLDTSRGLMTWGSA----SNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYS 761
Query: 70 VALVSAGETYKGEDLVCYSWGANNNGQ---LGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
L G+ Y + GA LG+ E +L P +E+ + V V+
Sbjct: 762 SVLTENGDVY------LWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD-----VVSVS 810
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 186
G H A + R N E + W G+GENGQLGHG T + + P+ ++ L + ++ V
Sbjct: 811 IGFCHGAAV----RANG--ELLTW--GVGENGQLGHGDTNNQIEPKIIQSLTSF-WITQV 861
Query: 187 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 244
CG HT ++ G V+SWG E G LGL +T++ SP+ +S K+
Sbjct: 862 QCGEKHTICLTKNGKVYSWGASEYGQLGL---GDVTQHS-----SPMQVSAL----EKY- 908
Query: 245 DPVQVACGAAHTVLVT 260
+ +Q+A G+ H ++T
Sbjct: 909 NVLQIASGSTHCAVLT 924
Score = 143 (55.4 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 54/193 (27%), Positives = 79/193 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPL--PDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
ICS+ +G S + G +++WG + P G + P + VV
Sbjct: 751 ICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVS 808
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
V+ G H A+ + GE +WG NGQLG GD +++ PKII++ S W
Sbjct: 809 VSIGFCHGAAVRANGELL--------TWGVGENGQLGHGDTNNQIEPKIIQSLT--SFW- 857
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
+ +V CG HT LT + S GLG+ Q SAL V ++
Sbjct: 858 ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASG- 916
Query: 182 YLVSVDCGLFHTS 194
S C + TS
Sbjct: 917 ---STHCAVLTTS 926
Score = 133 (51.9 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/139 (27%), Positives = 58/139 (41%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+S + SV G A+ G L WG + ++ G + P + +
Sbjct: 803 LSDVVSVSIGFCHGAAVRANGELLTWG---VGENGQLGHGDTNNQIEPKIIQSLTSFWIT 859
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+V CG +H + L G+ Y SWGA+ GQLGLGD P + + +
Sbjct: 860 QVQCGEKHTICLTKNGKVY--------SWGASEYGQLGLGDVTQHSSPMQVSALEK---Y 908
Query: 121 AVYEVTCGSFHTALLTHRK 139
V ++ GS H A+LT K
Sbjct: 909 NVLQIASGSTHCAVLTTSK 927
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+ +G GQ+G G+T + P +V Q +V + CG + V + G+V+ WG
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYN- 208
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G N L G+ ++P ++ HG +Q+ACG AHT+ +TD+G L++W
Sbjct: 209 --G---NGQLGLGNNGNQLTPCRVAAL--HGVCI---LQIACGYAHTLALTDEGL-LYAW 257
Query: 270 GRGRSGVLGTGKTIDFFAPAIVL 292
G G LGTG + +P ++
Sbjct: 258 GANTYGQLGTGNKSNQLSPLQIM 280
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + + ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVAALHGV---CILQIACGYAHTLALTD--------E 251
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G + L P Q+ + V ++ C HTS + +G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAA-CHSAHTSAAKTQSGQVYMW 310
Query: 206 GMEKG 210
G +G
Sbjct: 311 GQCRG 315
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 63/224 (28%), Positives = 96/224 (42%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-H 131
SA E Y + + +G N + LG GD +S + PK +E + ++ GS H
Sbjct: 30 SANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKK---ISSLSYGSGPH 86
Query: 132 TALLTHRKRPNDMLESMCWTFGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
L T E W G NG QLG+G T + P QV ++ V CG
Sbjct: 87 VLLCTEDG------EVYAW----GHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACG 136
Query: 190 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP--V 247
H+ +S GD+++WG G + S T N+ +P +S QD V
Sbjct: 137 SHHSMALSFDGDLYAWGYNN-CGQVGSGS-TANQP----TPRRVSNC------LQDKMVV 184
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ACG ++ V ++G +++ WG +G LG G + P V
Sbjct: 185 GIACGQTSSMAVVNNG-EVYGWGYNGNGQLGLGNNGNQLTPCRV 227
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ ++ V G S+A+ G L+ WG NC G S + TP V +
Sbjct: 127 LKKVIEVACGSHHSMALSFDGDLYAWGYNNC-----GQVGSGSTANQPTPRRVSNCLQDK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A+V+ GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 MVVGIACGQTSSMAVVNNGEVY--------GWGYNGNGQLGLGNNGNQLTPCRVAALHGV 233
Query: 118 SPWAVYEVTCGSFHTALLT 136
+ ++ CG HT LT
Sbjct: 234 ---CILQIACGYAHTLALT 249
Score = 136 (52.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ + G S+A+ N G ++ WG + G + + TP V HG ++++A
Sbjct: 183 VVGIACGQTSSMAVVNNGEVYGWG---YNGNGQLGLGNNGNQLTPCRVAALHGVCILQIA 239
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG H +AL G + Y+WGAN GQLG G++ ++L P I + V
Sbjct: 240 CGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKSNQLSPLQIMMEKE----RVV 287
Query: 124 EVT-CGSFHTA 133
E+ C S HT+
Sbjct: 288 EIAACHSAHTS 298
Score = 116 (45.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/187 (26%), Positives = 82/187 (43%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G NGQLG G + L P +V L V ++ + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAAL-HGVCILQIACGYAHTLALTDEGLLYAWGANT-- 261
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 270
L + +SP+ I + + V++A C +AHT +++ WG
Sbjct: 262 ----YGQLGTGNKSNQLSPLQIM------MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Query: 271 --RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 321
RG+S VL T FA V+W L+ E Q++ T + + +K K+ +
Sbjct: 312 QCRGQSVVLPHLTHFACTDDVFACFATPAVMWRLLSVE--QEDFLT--VAESLK-KEFDS 366
Query: 322 AEERDEK 328
E D K
Sbjct: 367 PETADLK 373
Score = 111 (44.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 45/158 (28%), Positives = 68/158 (43%)
Query: 3 QICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVV 60
+I S+ G G L G ++ WG+ S G + TP V + V+
Sbjct: 75 KISSLSYGSGPHVLLCTEDGEVYAWGH---NGYSQLGNGATNQGVTPVQVCTNLLLKKVI 131
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+VACGS H +AL ++ G DL Y+WG NN GQ+G G ++ P+ + QD
Sbjct: 132 EVACGSHHSMAL-----SFDG-DL--YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDK-- 181
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 158
V + CG + + + + GLG NG
Sbjct: 182 MVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNG 219
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 77/280 (27%), Positives = 123/280 (43%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G + + + + G + +G+ + G SL P+ V G+ +V+VACG+
Sbjct: 404 VACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 460
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
HV+AL + E + +WG + G+LGLG RES P+++ V
Sbjct: 461 SHVLALSTERELF--------AWGRGDGGRLGLGTRESHCCPQLVP---MPPGQEAQRVV 509
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALVPEQVKELP------ 178
CG + +LT P L F LG + LG V E V P
Sbjct: 510 CGIDSSMILTV---PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPL 566
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
L+SVD G H+ +++++GD +++G + + L N + +P + G
Sbjct: 567 DQEPLLSVDLGPAHSLLLTASGDCYTFGSNQ------HGQLGTNARRVSRAPCRVQGL-- 618
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
G K VACG A TV + +G +++SWG+G G LG
Sbjct: 619 QGIKIST---VACGDAFTVAIGAEG-EVFSWGKGARGRLG 654
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 82/291 (28%), Positives = 124/291 (42%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSP--VWDF---- 54
+++ V AG + +G L +W PL GG L + P P V F
Sbjct: 340 TEVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGALLPGAIEQPQPQFVSRFLEGQ 396
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 397 SGVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGSLNDISQPTIVEAL 448
Query: 115 NQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 173
+ + +V CG+ H AL T R E W G G+ G+LG GT +S P+
Sbjct: 449 ---LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDGGRLGLGTRESHCCPQL 496
Query: 174 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPI 231
V +P V CG+ + +++ G + G + LGL P SL A
Sbjct: 497 VP-MPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDP-LSLGEEPAPHQQVEE 554
Query: 232 LISGNGPHG--PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
++ P G P Q+P+ V G AH++L+T G +++G + G LGT
Sbjct: 555 AVTFT-PLGSAPLDQEPLLSVDLGPAHSLLLTASG-DCYTFGSNQHGQLGT 603
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 173 (66.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 90/332 (27%), Positives = 141/332 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLDTQVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L P+ +
Sbjct: 176 KVASGNDHLVMLTTDGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPRCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ + V + CG++ T ++ E + FGL QLG T S
Sbjct: 230 LLKSRGTRGRVRFQDAFCGAYFTFAISR--------EGHVYGFGLSNYHQLGTPGTGSCF 281
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGD 226
+P+ + V G HT + S G +S G E G LGL A +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAE-------E 334
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 286
P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D +
Sbjct: 335 KSIPTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQEDDAW 386
Query: 287 APAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 318
+P + L E + +++GG + KD
Sbjct: 387 SPVEMTGKQL-ENREVLTVSSGGQHTVLLVKD 417
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 25 VSHRSHNTE--PGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +T+DG +++ WG R +GV+G
Sbjct: 130 HTAALTEDG-RVFLWGSFRDNNGVIG 154
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 75/296 (25%), Positives = 117/296 (39%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 58
+ + +AGGM ++ + +G ++ +G C D G + V S P V +
Sbjct: 66 LQDVVQAEAGGMHTVCLSQSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 120
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGD-RESRLRPKIIETFN 115
VV+V+ G H AL G + WG+ +NNG +GL + + + P ++
Sbjct: 121 VVQVSAGDSHTAALTEDGRVFL--------WGSFRDNNGVIGLLEPMKKSMVPVQVQLDT 172
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQL-----GHGTTQSAL 169
Q V +V G+ H +LT D+ C G LG +L G + L
Sbjct: 173 Q-----VVKVASGNDHLVMLT---TDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 224
Query: 170 VPEQV----KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 225
VP V + V CG + T +S G V+ G GL L G
Sbjct: 225 VPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY------GFGLSNYHQLGTPGTG 278
Query: 226 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
P ++ + + K V + G HTV + +G K +S GR G LG G+
Sbjct: 279 SCFIPQNLT-SFKNSTKSW--VGFSGGQHHTVCMDSEG-KAYSLGRAEYGRLGLGE 330
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 178 (67.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 60/198 (30%), Positives = 94/198 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
YS G N+ GQLG +S RP+ I+ S + V+CG H+ + H+ R
Sbjct: 50 YSCGDNSRGQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGR------ 100
Query: 147 SMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+T+G G GQLG G ++ + +P ++ L + ++ V CG +H+ +S G V+SW
Sbjct: 101 --VFTWGAGSEGQLGIGESKEISFMPTKINSLAG-IKIIQVSCGHYHSLALSEDGQVFSW 157
Query: 206 GMEK----GLG--LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 259
G + GLG LC AS + ++ + I P+ QVA G H+ +
Sbjct: 158 GSNRQGQLGLGNNLCSQASPQKVKSLEGI-PL---------------AQVAAGGTHSFAL 201
Query: 260 TDDGYKLWSWGRGRSGVL 277
+ G + WG RSG L
Sbjct: 202 SLMGTS-FGWGNNRSGQL 218
Score = 171 (65.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 69/241 (28%), Positives = 111/241 (46%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPSPVWDFHGHTVVKV 62
V G S+A+ + G ++ WG + +EG G S SF P+ + G +++V
Sbjct: 85 VSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGESKEISFMPTKINSLAGIKIIQV 138
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWA 121
+CG H +AL G+ + SWG+N GQLGLG+ S+ P+ +++ + P A
Sbjct: 139 SCGHYHSLALSEDGQVF--------SWGSNRQGQLGLGNNLCSQASPQKVKSL-EGIPLA 189
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL---GHGTTQSALVPEQVKELP 178
+V G H+ L+ M S W G +GQL G+ + P + L
Sbjct: 190 --QVAAGGTHSFALSL------MGTSFGW--GNNRSGQLALSGNSAKEQIYKPHSIGAL- 238
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+ + +V + CG HTSV++ G V+++G L + R+ G P LI G G
Sbjct: 239 KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSP---RSGRG---GPQLIEGIGG 292
Query: 239 H 239
H
Sbjct: 293 H 293
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/136 (32%), Positives = 69/136 (50%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 207
+ G+N GQLG + QS PE ++ L V++ V CG H+ V G V++WG
Sbjct: 50 YSCGDNSRGQLGQKSPQSTKRPEPIQALST-VHIDLVSCGKEHSVAVCHQGRVFTWGAGS 108
Query: 208 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
E LG+ + ++ P I N G K +QV+CG H++ +++DG +++
Sbjct: 109 EGQLGIGESKEIS-------FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVF 155
Query: 268 SWGRGRSGVLGTGKTI 283
SWG R G LG G +
Sbjct: 156 SWGSNRQGQLGLGNNL 171
Score = 107 (42.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-R 102
S+ P P+ + V+CG EH VA+ G + +WGA + GQLG+G+ +
Sbjct: 67 STKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVF--------TWGAGSEGQLGIGESK 118
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 157
E P I N + + +V+CG +H+ L+ + + GLG N
Sbjct: 119 EISFMPTKI---NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNN 170
Score = 101 (40.6 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 145 LESMCWTFGLGEN--GQL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
L M +FG G N GQL G+ + P + L + + +V + CG HTSV++
Sbjct: 201 LSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGAL-KTLNVVYISCGYEHTSVLTED 259
Query: 200 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 259
G V+++G L + R+ G P LI G G H Q+ CG+ HT+
Sbjct: 260 GQVFTFGGSSSEQLQHSP---RSGRG---GPQLIEGIGGHVS------QIECGSYHTIAY 307
Query: 260 TDDGYKLWSWGRGRS 274
++ S GRG S
Sbjct: 308 VYTTGQVVSLGRGPS 322
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 177 (67.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 73/297 (24%), Positives = 130/297 (43%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK- 61
+I S+ G SLA+D+ G ++ WGN FS+V + T V + G +
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIAT 306
Query: 62 -VACGSEHVVALVSAGETYKGEDLVCYSWGANN-NGQLGLGDRESRLRPKIIETFNQDSP 119
+A G ++ + L S G+ Y + Y G +G LG ++ P I++
Sbjct: 307 AIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKI-PSILQ------- 358
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVK--- 175
+ + C S+H+ L L+ +T G NG+LG ++ S+ PE+V
Sbjct: 359 --MKSIACASWHSVFLD--------LKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITN 408
Query: 176 -----ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAI 228
LPQ + + CG T+V+S +G ++SWG+ + LGL ++ +
Sbjct: 409 SKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYS---- 464
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 285
P L++ P+ A G H V ++D G +++ +G + G G+ ++F
Sbjct: 465 QPKLVTALNPYTIH-----SFAVGDQHVVALSDQG-EVFCYGDNSTLQCGFGEVLNF 515
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 63/274 (22%), Positives = 121/274 (44%)
Query: 10 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 69
G +L + + GA++ G C + + ++ P+ + + + +ACG+ H
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVL---IPTQILELSNKRIKSIACGTHHS 258
Query: 70 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ-DSPWAVYEVTC 127
+A+ G+ Y SWG +G+LGLG+ S + P +I N+ S +
Sbjct: 259 LAMDDLGQVY--------SWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAA 310
Query: 128 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV-KELPQYVYLVSV 186
G ++ +L D+ ++FG + +LG+ AL + K++P + + S+
Sbjct: 311 GCDNSMILGSN---GDV-----YSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSI 362
Query: 187 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 246
C +H+ + G V++ G L S + + +S I+ + +G Q+
Sbjct: 363 ACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVS---ITNSKTNGTLPQEE 419
Query: 247 V--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
V Q+ACG T ++++ G L+SWG LG
Sbjct: 420 VIKQIACGTNFTTVLSESG-SLYSWGVNTKSQLG 452
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 172 (65.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 72/250 (28%), Positives = 109/250 (43%)
Query: 39 GFSLVSS-FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 97
GF +S F P+ F H++ +A G H VAL T++G+ ++WG G L
Sbjct: 133 GFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL-----THQGD---VFTWGYGGFGAL 184
Query: 98 GLGDRESRLRPKIIETFNQDSPW--AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 155
G L P+ ++ DS W + + HTA +T E W G
Sbjct: 185 GHKVYTRELVPRRVD----DS-WDCKISAIATSGTHTAAITESG------ELYMWGREEG 233
Query: 156 ENGQLGHGTTQSA------LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+ G+LG G + VP +VK L V + SV CG F T ++ G +W+WG
Sbjct: 234 D-GRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANS 290
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
N L R + P+ + G + Q+ACG H++ +T++G K+ SW
Sbjct: 291 ------NYELGRGDNLGGWEPMPVPSL--EGVRI---TQIACGGYHSLALTEEG-KVLSW 338
Query: 270 GRGRSGVLGT 279
G G G LG+
Sbjct: 339 GHGGHGQLGS 348
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 54/189 (28%), Positives = 83/189 (43%)
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
+ G H+ LTH+ D+ +T+G G G LGH LVP +V +
Sbjct: 157 IALGGLHSVALTHQ---GDV-----FTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISA 208
Query: 185 SVDCGLFHTSVVSSAGDVWSWGMEKG---LGLCPNASLTRNEAGDAISPILISGNGPHGP 241
G HT+ ++ +G+++ WG E+G LGL P NE G P +
Sbjct: 209 IATSGT-HTAAITESGELYMWGREEGDGRLGLGPGRG--PNEGGGLSVPSKVKA------ 259
Query: 242 KFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 300
PV V+CG T+ +T +G +LW+WG + LG G + + P V P E
Sbjct: 260 -LTVPVASVSCGGFFTMALTKEG-QLWNWGANSNYELGRGDNLGGWEPMPV---PSLEGV 314
Query: 301 KQDELNTGG 309
+ ++ GG
Sbjct: 315 RITQIACGG 323
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 84 LVCYSWGANNNGQLGLGDRESRLRPKIIET--FNQDSPWAV------YEVTCGSFHTALL 135
L +SWG +GQLG G E R+ P + F D +++ + SF +
Sbjct: 48 LQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGIS 107
Query: 136 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 195
++ W +G G+ G+LG G S VP + L + + + G H+
Sbjct: 108 CGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHSVA 166
Query: 196 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 255
++ GDV++WG G G + TR + P + + K +A H
Sbjct: 167 LTHQGDVFTWGYG-GFGALGHKVYTRE-----LVPRRVDDSWDC--KIS---AIATSGTH 215
Query: 256 TVLVTDDGYKLWSWGR----GRSGVLGTGK 281
T +T+ G +L+ WGR GR G LG G+
Sbjct: 216 TAAITESG-ELYMWGREEGDGRLG-LGPGR 243
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/194 (25%), Positives = 83/194 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN---------CPLPDSSTEGGFSLVSSFTPSPVWD 53
+I ++ G + AI +G L+MWG P + GG S+ S V
Sbjct: 205 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV-- 262
Query: 54 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
V V+CG +AL G+ + +WGAN+N +LG GD P + +
Sbjct: 263 ----PVASVSCGGFFTMALTKEGQLW--------NWGANSNYELGRGDNLGGWEPMPVPS 310
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 173
+ ++ CG +H+ LT + + W G G +GQLG + ++ VP +
Sbjct: 311 LEGVR---ITQIACGGYHSLALTEEGKV------LSW--GHGGHGQLGSSSLRNQKVPTE 359
Query: 174 VKELP--QYVYLVS 185
++ L + V++ S
Sbjct: 360 IEALADKKIVFIAS 373
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 37/133 (27%), Positives = 56/133 (42%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W +G N +LG G P V L + V + + CG +H+ ++ G V SW
Sbjct: 280 EGQLWNWGANSNYELGRGDNLGGWEPMPVPSL-EGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G G ++SL + I + K V +A G + + +TD G +
Sbjct: 339 G-HGGHGQLGSSSLRNQKVPTEIEALA-------DKKI---VFIASGGSSSAAITDGG-E 386
Query: 266 LWSWGRGRSGVLG 278
LW WG + LG
Sbjct: 387 LWMWGNAKDFQLG 399
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 177 (67.4 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 62/234 (26%), Positives = 97/234 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI SV G + I + G L+ +G+ G + F P V G + V
Sbjct: 380 QIASVSCGPWHTALITSTGQLFTFGDGTF---GVLGHGDKETVFYPREVESLSGLRTIAV 436
Query: 63 ACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
ACG H A+V T+ + ++WG + +LG GD+E RL+P + +
Sbjct: 437 ACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT- 495
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
+ V CG T LT +T G GQLG+ L P V++
Sbjct: 496 --FHRVACGHSLTVGLT--------TSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLT 544
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 233
+ + CG +H +V++S +V++WG KG N L + D +P L+
Sbjct: 545 KDCVEEIACGAYHVAVLTSRNEVFTWG--KGA----NGRLGHGDVEDRKAPTLV 592
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 63/213 (29%), Positives = 102/213 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA-----LLTHRKRP 141
+++G G LG GD+E+ P+ +E+ S V CG +H A ++TH
Sbjct: 401 FTFGDGTFGVLGHGDKETVFYPREVESL---SGLRTIAVACGVWHAAAIVEVIVTHSS-- 455
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ + +T+G G+ +LGHG + L P V L + + V CG T ++++G
Sbjct: 456 SSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH-RVACGHSLTVGLTTSGK 514
Query: 202 VWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVL 258
V++ G G LG PNA D P L+ +D V+ +ACGA H +
Sbjct: 515 VYTMGSTVYGQLGN-PNA--------DGKLPCLVEDK-----LTKDCVEEIACGAYHVAV 560
Query: 259 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T ++++WG+G +G LG G D AP +V
Sbjct: 561 LTSRN-EVFTWGKGANGRLGHGDVEDRKAPTLV 592
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
++WG + G+LG G + P++IE+ S + V CG FHT +T E
Sbjct: 294 FTWGEASGGRLGHGMGKDVTGPQLIESLAATS---IDFVACGEFHTCAVTMTG------E 344
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
W G G LGHGT S +P+++ + + + SV CG +HT++++S G ++++G
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFG 404
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT-----VLVTD 261
+ G+ L + P + G + + VACG H V+VT
Sbjct: 405 -DGTFGV-----LGHGDKETVFYPREVESLS--GLR---TIAVACGVWHAAAIVEVIVTH 453
Query: 262 DGY-----KLWSWGRGRSGVLGTG 280
KL++WG G LG G
Sbjct: 454 SSSSVSSGKLFTWGDGDKSRLGHG 477
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 49/143 (34%), Positives = 71/143 (49%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G G+LGHG + P+ ++ L + V CG FHT V+ G++++WG
Sbjct: 294 FTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSIDFVACGEFHTCAVTMTGEIYTWG--D 350
Query: 210 GLGLCPNASLTRNEAGDAIS---PILISGNGP-HGPKFQDPVQVACGAAHTVLVTDDGYK 265
G NA L + G +S P ISG P G + V+CG HT L+T G +
Sbjct: 351 GTH---NAGLLGH--GTDVSHWIPKRISG--PLEGLQI---ASVSCGPWHTALITSTG-Q 399
Query: 266 LWSWGRGRSGVLGTGKTIDFFAP 288
L+++G G GVLG G F P
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYP 422
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 59/213 (27%), Positives = 87/213 (40%)
Query: 5 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVA 63
C VK ++S G ++ WG S G + T P + ++ VA
Sbjct: 279 CGVKHAALVS----RQGEVFTWGEA----SGGRLGHGMGKDVTGPQLIESLAATSIDFVA 330
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG H A+ GE Y D G +N G LG G S PK I +
Sbjct: 331 CGEFHTCAVTMTGEIYTWGD------GTHNAGLLGHGTDVSHWIPKRIS--GPLEGLQIA 382
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY--- 180
V+CG +HTAL+T +TFG G G LGHG ++ P +V+ L
Sbjct: 383 SVSCGPWHTALITST--------GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTI 434
Query: 181 -----VYLVS--VDCGLFHTSVVSSAGDVWSWG 206
V+ + V+ + H+S S+G +++WG
Sbjct: 435 AVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWG 467
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 76 GETYKGEDLVCYS---WGANNNGQLG-LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 131
G+ Y +++C + +GA+ N +G LG R L PK +E+ + V+ + CG H
Sbjct: 229 GDVYIWGEVLCENVTKFGADKN--IGYLGSRSDVLIPKPLES---NVVLDVHHIACGVKH 283
Query: 132 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 191
AL++ R ++ +T+G G+LGHG + P+ ++ L + V CG F
Sbjct: 284 AALVS---RQGEV-----FTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSIDFVACGEF 334
Query: 192 HTSVVSSAGDVWSWG 206
HT V+ G++++WG
Sbjct: 335 HTCAVTMTGEIYTWG 349
Score = 130 (50.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 152 FGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 210
FG +N +G+ G+ L+P+ + E + + + CG+ H ++VS G+V++WG G
Sbjct: 245 FGADKN--IGYLGSRSDVLIPKPL-ESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASG 301
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
L D P LI F VACG HT VT G ++++WG
Sbjct: 302 ------GRLGHGMGKDVTGPQLIESLAATSIDF-----VACGEFHTCAVTMTG-EIYTWG 349
Query: 271 RG--RSGVLGTGKTIDFFAPAIVLWP 294
G +G+LG G + + P + P
Sbjct: 350 DGTHNAGLLGHGTDVSHWIPKRISGP 375
Score = 130 (50.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 73 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFH 131
++ G T G+ Y+ G+ GQLG + + +L P ++E +D V E+ CG++H
Sbjct: 505 LTVGLTTSGK---VYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKD---CVEEIACGAYH 557
Query: 132 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 191
A+LT R N++ +T+G G NG+LGHG + P V L + ++ ++ CG
Sbjct: 558 VAVLTSR---NEV-----FTWGKGANGRLGHGDVEDRKAPTLVDALKER-HVKNIACGSN 608
Query: 192 HTSVVSSAGDVWSWGMEKG-LGLCPNA-SLTR 221
T+ + W G E+ C A TR
Sbjct: 609 FTAAICL--HKWVSGTEQSQCSACRQAFGFTR 638
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 171 (65.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 89/332 (26%), Positives = 139/332 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLDAPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GLG L P+ +
Sbjct: 176 KVASGNDHLVMLTNDGDLYT---LGCGEQGQLGRVPELFANRGGRQGLG---RLLVPRCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ + V + CG++ T ++ E + FGL QLG T S
Sbjct: 230 LLKSRGTRGRVRFQDAFCGAYFTFAISR--------EGHVYGFGLSNYHQLGTPGTGSCF 281
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGD 226
+P+ + V G HT + S G +S G E G LGL A +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAE-------E 334
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 286
P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D +
Sbjct: 335 KSIPTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQDEDAW 386
Query: 287 APAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 318
+P + L +++GG + KD
Sbjct: 387 SPVEMTGKQLENRVVLT-VSSGGQHTVLLVKD 417
Score = 125 (49.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 77/295 (26%), Positives = 117/295 (39%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 58
+ + +AGGM ++ + +G ++ +G C D G + V S P V +
Sbjct: 66 LQDVVQAEAGGMHTVCLSQSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 120
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQ 116
VV+V+ G H AL G + WG+ +NNG +GL E + +
Sbjct: 121 VVQVSAGDSHTAALTEDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQL 170
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQL--GHGTTQSA---LV 170
D+P V +V G+ H +LT+ D+ C G LG +L G Q LV
Sbjct: 171 DAP--VVKVASGNDHLVMLTN---DGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLV 225
Query: 171 PEQV----KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
P V + V CG + T +S G V+ G GL L G
Sbjct: 226 PRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY------GFGLSNYHQLGTPGTGS 279
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
P ++ + + K V + G HTV + +G K +S GR G LG G+
Sbjct: 280 CFIPQNLT-SFKNSTKSW--VGFSGGQHHTVCMDSEG-KAYSLGRAEYGRLGLGE 330
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 25 VSHRSHNTE--PGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +T+DG +++ WG R +GV+G
Sbjct: 130 HTAALTEDG-RVFLWGSFRDNNGVIG 154
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 172 (65.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 74/247 (29%), Positives = 111/247 (44%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
TVV +C + H + + + G+ + SWG N GQLG GD + P++IE + +
Sbjct: 150 TVVSGSCAA-HSLLITTEGKLW--------SWGRNEKGQLGHGDTKRVEAPRLIEALSHE 200
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
A+ CG HT LT + FG + GQLG G Q+ VP + +
Sbjct: 201 ---AIVLAACGRNHTLALTDT--------GSVFAFGENKMGQLGLGN-QTDAVPSPAQIM 248
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPN----ASLTRNEAGDAISP- 230
+ + CG + ++ G+++S+G E G LG + A R E + P
Sbjct: 249 YNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 308
Query: 231 ---ILI--SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
I I + +G P V+ VACGA HT LV D +++SWG G G LG + D
Sbjct: 309 RVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKD 367
Query: 285 FFAPAIV 291
P +V
Sbjct: 368 EMVPRLV 374
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 172 (65.6 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 73/247 (29%), Positives = 110/247 (44%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
TVV +C + H + + + G+ + SWG N GQLG GD + P++IE + +
Sbjct: 152 TVVSGSCAA-HSLLITTEGKLW--------SWGRNEKGQLGHGDTKRVEAPRLIEGLSHE 202
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
+ CG HT LT + FG + GQLG G Q+ VP + +
Sbjct: 203 ---VIVSAACGRNHTLALTET--------GSVFAFGENKMGQLGLGN-QTDAVPSPAQIM 250
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPN----ASLTRNEAGDAISP- 230
+ + CG + ++ G+++S+G E G LG + A R E + P
Sbjct: 251 YNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 310
Query: 231 ---ILI--SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
I I + +G P V+ VACGA HT LV D +++SWG G G LG + D
Sbjct: 311 RVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKD 369
Query: 285 FFAPAIV 291
P +V
Sbjct: 370 EMVPRLV 376
Score = 119 (46.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 54/219 (24%), Positives = 93/219 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKV 62
I S G +LA+ G+++ +G + + G + PSP ++G + K+
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGE----NKMGQLGLGNQTDAVPSPAQIMYNGQPITKM 259
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ-LGLGDR---ESRLRPKIIETF---N 115
ACG+E + + G Y G N++G+ + R + L P+ + F
Sbjct: 260 ACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKT 319
Query: 116 QDS---PW---AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
+D P V +V CG+ HT +L +KR +++G G G+LGH + +
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKR--------VFSWGFGGYGRLGHAEQKDEM 371
Query: 170 VPEQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
VP VK + P + G + VS G ++ WG
Sbjct: 372 VPRLVKLFDFPGRG-ASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 42 (19.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRS-GVLGTG 280
+ACG + ++ D+ SWG + G LG G
Sbjct: 435 LACGKSSIIVAADES--TISWGPSPTFGELGYG 465
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 176 (67.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 56/191 (29%), Positives = 89/191 (46%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G ++K A G H + L S Y C G N+ GQLG +S RP+ E
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYS-----C---GDNSRGQLGQKSPQSTKRPE--EPIQ 76
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 174
S + V+CG H+ + H+ R +T+G G GQLG G ++ + +P ++
Sbjct: 77 ALSTVHIDLVSCGKEHSVAVCHQGR--------VFTWGAGSEGQLGIGESKEISFMPTKI 128
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAI 228
L + ++ V CG +H+ +S G V+SWG + GLG LC AS + ++ + I
Sbjct: 129 NSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 187
Query: 229 SPILISGNGPH 239
++ G H
Sbjct: 188 PLAQVAAGGTH 198
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPSPVWDFHGHTVVKV 62
V G S+A+ + G ++ WG + +EG G S SF P+ + G +++V
Sbjct: 86 VSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGESKEISFMPTKINSLAGIKIIQV 139
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWA 121
+CG H +AL G+ + SWG+N GQLGLG+ S+ P+ +++ + P A
Sbjct: 140 SCGHYHSLALSEDGQVF--------SWGSNRQGQLGLGNNLCSQASPQKVKSL-EGIPLA 190
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSA---LVPEQVKEL 177
+V G H+ L+ M S W G +GQL G + A P + L
Sbjct: 191 --QVAAGGTHSFALSL------MGTSFGW--GNNRSGQLALSGNSAKAEQIYKPHSIGAL 240
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 237
+ + +V + CG HTSV++ G V+++G L + R+ G P LI G G
Sbjct: 241 -KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSP---RSGRG---GPQLIEGIG 293
Query: 238 PH 239
H
Sbjct: 294 GH 295
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/136 (31%), Positives = 68/136 (50%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 207
+ G+N GQLG + QS PE+ + V++ V CG H+ V G V++WG
Sbjct: 50 YSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGS 109
Query: 208 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
E LG+ + ++ P I N G K +QV+CG H++ +++DG +++
Sbjct: 110 EGQLGIGESKEIS-------FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVF 156
Query: 268 SWGRGRSGVLGTGKTI 283
SWG R G LG G +
Sbjct: 157 SWGSNRQGQLGLGNNL 172
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 150 WTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+T+G G GQLG G ++ + +P ++ L + ++ V CG +H+ +S G V+SWG
Sbjct: 103 FTWGAGSEGQLGIGESKEISFMPTKINSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSN 161
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
+ L L N A SP + G QVA G H+ ++ G +
Sbjct: 162 RQGQL----GLGNNLCSQA-SPQKVKSL--EGIPL---AQVAAGGTHSFALSLMGTS-FG 210
Query: 269 WGRGRSGVL 277
WG RSG L
Sbjct: 211 WGNNRSGQL 219
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 183 (69.5 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 72/276 (26%), Positives = 124/276 (44%)
Query: 18 DNAGALWMWGNCPLPDSSTEGGFSLVSSF--------TPSPVWDFHGHTVVKVACGSEHV 69
D G +++WG + D+ + G +S+ P P+ V ++ACG H
Sbjct: 235 DALGDVYIWGEV-ICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHA 293
Query: 70 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 129
A V T +GE ++WG + G+LG G + P+++E+ S +V V CG
Sbjct: 294 -AFV----TRQGE---IFTWGEESGGRLGHGIGKDVFHPRLVESLTATS--SVDFVACGE 343
Query: 130 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
FHT +T E W G G LGHG+ S +P+++ + +++ SV CG
Sbjct: 344 FHTCAVTLAG------ELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCG 397
Query: 190 LFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRN-EAGDAISPILISGNGPHGPKFQ 244
+HT++++S G ++++G G G R E+ + I +S H
Sbjct: 398 PWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAV- 456
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
V++ +++ V+ KL++WG G LG G
Sbjct: 457 --VEIIVTQSNSSSVSSG--KLFTWGDGDKNRLGHG 488
Score = 173 (66.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 76 GETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
G+ Y +++C G + N L R L PK +E+ + V+++ CG H
Sbjct: 238 GDVYIWGEVICDNVVKVGIDKNASY-LTTRTDVLVPKPLES---NIVLDVHQIACGVRHA 293
Query: 133 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 192
A +T R ++ +T+G G+LGHG + P V+ L + V CG FH
Sbjct: 294 AFVT---RQGEI-----FTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345
Query: 193 TSVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGN--GPHGPKFQDPVQV 249
T V+ AG++++WG +GL + S + I P I+G+ G H V
Sbjct: 346 TCAVTLAGELYTWGDGTHNVGLLGHGS----DISHWI-PKRIAGSLEGLH------VASV 394
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDF 285
+CG HT L+T G +L+++G G GVLG G +T+ +
Sbjct: 395 SCGPWHTALITSYG-RLFTFGDGTFGVLGHGDKETVQY 431
Score = 168 (64.2 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPN 142
+++G G LG GD+E+ P+ +E+ S V+CG +HTA ++ + +
Sbjct: 411 FTFGDGTFGVLGHGDKETVQYPREVESL---SGLRTIAVSCGVWHTAAVVEIIVTQSNSS 467
Query: 143 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 202
+ +T+G G+ +LGHG L P V L Y + + CG T ++++G V
Sbjct: 468 SVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFH-KIACGHSLTVGLTTSGQV 526
Query: 203 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
++ G G N D P L+ +F + +++CGA H +T
Sbjct: 527 FTMGSTV-YGQLGNLQT------DGKLPCLVEDK--LASEFVE--EISCGAYHVAALTSR 575
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++++WG+G +G LG G D P IV
Sbjct: 576 N-EVYTWGKGANGRLGHGDLEDRKVPTIV 603
Score = 162 (62.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 62/260 (23%), Positives = 105/260 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ SV G + I + G L+ +G+ G V P V G + V+
Sbjct: 391 VASVSCGPWHTALITSYGRLFTFGDGTFGVLG-HGDKETVQY--PREVESLSGLRTIAVS 447
Query: 64 CGSEHVVALVSAGETYKGEDLVC----YSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
CG H A+V T V ++WG + +LG GD++ RL+P +
Sbjct: 448 CGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID--- 504
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
+ +++ CG T LT +T G GQLG+ T L P V++
Sbjct: 505 YNFHKIACGHSLTVGLT--------TSGQVFTMGSTVYGQLGNLQTDGKL-PCLVEDKLA 555
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
++ + CG +H + ++S +V++WG KG N L + D P ++
Sbjct: 556 SEFVEEISCGAYHVAALTSRNEVYTWG--KGA----NGRLGHGDLEDRKVPTIVEALKDR 609
Query: 240 GPKFQDPVQVACGAAHTVLV 259
K+ +ACG+ +T +
Sbjct: 610 HVKY-----IACGSNYTAAI 624
Score = 161 (61.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 55/210 (26%), Positives = 93/210 (44%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVV 60
S + V G + A+ AG L+ WG+ + G S +S + P + G V
Sbjct: 334 SSVDFVACGEFHTCAVTLAGELYTWGD-GTHNVGLLGHGSDISHWIPKRIAGSLEGLHVA 392
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
V+CG H + S G + ++G G LG GD+E+ P+ +E+ S
Sbjct: 393 SVSCGPWHTALITSYGRLF--------TFGDGTFGVLGHGDKETVQYPREVESL---SGL 441
Query: 121 AVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
V+CG +HTA ++ + + + +T+G G+ +LGHG L P V
Sbjct: 442 RTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPA 501
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
L Y + + CG T ++++G V++ G
Sbjct: 502 LIDYNFH-KIACGHSLTVGLTTSGQVFTMG 530
Score = 39 (18.8 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 299 EFKQDELNTGGLDDEIKTKD-LEGAEERDEKLSSAMEEMKLLQSKLS-VMER 348
EF++ EL + KT++ L AEE K +A E +K L ++L V E+
Sbjct: 857 EFQEVELQ----NSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEK 904
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 79/289 (27%), Positives = 121/289 (41%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSP--VWDF---- 54
+++ V AG + +G L +W PL GG L + P P V F
Sbjct: 338 TEVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGTLLPGAVELPQPQFVSRFLEGQ 394
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ VACG L G + ++G+ +NG LG G+ +P I+E
Sbjct: 395 SGVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGNLTDISQPTIVEAL 446
Query: 115 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
+ + +V CG+ H L+ D E W G G+ G+LG GT +S P+QV
Sbjct: 447 ---LGYEMVQVACGASHVLALS-----TDG-ELFAW--GRGDGGRLGLGTRESHNCPQQV 495
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAG-DAISPI 231
P V CG+ + +++S G V + G + LGL + SL +
Sbjct: 496 PVAPGQE-AQRVVCGIDSSMILTSPGRVLACGSNRFNKLGL-DHLSLDEEPVPYQQVEEA 553
Query: 232 LISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
L P Q+P+ V G AH+ +T G +++G + G LGT
Sbjct: 554 LSFTPLGSAPLDQEPLLCVDLGTAHSAAITASG-DCYTFGSNQHGQLGT 601
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 69/239 (28%), Positives = 106/239 (44%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKII 111
D T+V+ G E V A D ++WG + G+LGLG RES P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQV 495
Query: 112 ETF-NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 170
Q++ V CG + +LT P +L C + + G L H + V
Sbjct: 496 PVAPGQEAQ----RVVCGIDSSMILTS---PGRVLA--CGSNRFNKLG-LDHLSLDEEPV 545
Query: 171 P-EQVKELPQYVYLVS----------VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 219
P +QV+E + L S VD G H++ ++++GD +++G + G +S
Sbjct: 546 PYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQH-GQLGTSSR 604
Query: 220 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
+ A P + G G K V VACG A TV V +G +++SWG+G G LG
Sbjct: 605 RVSRA-----PCRVQGL--EGIKM---VMVACGDAFTVAVGAEG-EVYSWGKGTRGRLG 652
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 67/246 (27%), Positives = 104/246 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G LA+ G L+ WG D G + S P V G +V
Sbjct: 450 EMVQVACGASHVLALSTDGELFAWGR---GDGGRLGLGTRESHNCPQQVPVAPGQEAQRV 506
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG----DRESRLRPKIIETFN--- 115
CG + + L S G L C G+N +LGL D E ++ E +
Sbjct: 507 VCGIDSSMILTSPGRV-----LAC---GSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTP 558
Query: 116 -QDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
+P + C G+ H+A +T D C+TFG ++GQLG + + + P
Sbjct: 559 LGSAPLDQEPLLCVDLGTAHSAAIT---ASGD-----CYTFGSNQHGQLGTSSRRVSRAP 610
Query: 172 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP-NASLTRNEAGDAI 228
+V+ L + + +V V CG T V + G+V+SWG +G LG +A L R D
Sbjct: 611 CRVQGL-EGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDET 669
Query: 229 SPILIS 234
P +++
Sbjct: 670 HPYMVT 675
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 125 (49.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ +S GD++ WG E
Sbjct: 183 FSWGAGRHGQLGHGTLEAELEPRLLEAL-QGLRMAKVAAGGWHSVCLSETGDIYIWGWNE 241
Query: 209 KGLGLCPNASLTRNEA 224
G P S T N+A
Sbjct: 242 SGQLALPTRSGTENKA 257
Score = 111 (44.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V ++ G+EHV+ L +AG+ + SWGA +GQLG G E+ L P+++E Q
Sbjct: 163 VRQLELGAEHVLLLCAAGQVF--------SWGAGRHGQLGHGTLEAELEPRLLEAL-QGL 213
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQSALVPEQVK 175
A +V G +H+ L+ D+ W G E+GQL T T++ E+
Sbjct: 214 RMA--KVAAGGWHSVCLSET---GDIY---IW--GWNESGQLALPTRSGTENKAEREEAT 263
Query: 176 EL 177
EL
Sbjct: 264 EL 265
Score = 87 (35.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
P D V +CG+ HT +VT G +L++WG G+ G LG + P V
Sbjct: 298 PLGSDAVMASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHKDSTSLDRPCCV 347
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 221
+LP V CG HT+VV+ G++++WG K G LG + SL R
Sbjct: 296 DLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDR 343
Score = 72 (30.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 30/118 (25%), Positives = 47/118 (39%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ ++ G L + AG ++ WG G +L + P + G + KV
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWG---AGRHGQLGHGTLEAELEPRLLEALQGLRMAKV 218
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQD 117
A G H V L G+ Y WG N +GQL L R E++ + N+D
Sbjct: 219 AAGGWHSVCLSETGDIY--------IWGWNESGQLALPTRSGTENKAEREEATELNED 268
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 176 (67.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 65/214 (30%), Positives = 104/214 (48%)
Query: 78 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 137
T +GE L G N++GQLGLG + + + F +P + ++ G +A LT
Sbjct: 102 TSQGEILAA---GGNSDGQLGLGHCNDSISFQRLRPFCDYAP--IKLLSAGDHTSAALTE 156
Query: 138 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 197
R W G GQLG G AL+P+++ + Q ++ VS CG H+++V+
Sbjct: 157 DGR------LFLW--GDNSAGQLGFGNDSHALLPKELN-MGQSIHWVS--CGYRHSALVT 205
Query: 198 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 257
+GDV+S+G E G L+ ++ + P + +QVACG HT+
Sbjct: 206 DSGDVYSFG-ESADG---RLGLSAHQLANHSYPQRVES-------LHSVLQVACGGKHTL 254
Query: 258 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+T+D +L+ +G G G LG G T+ F A + V
Sbjct: 255 ALTED--ELYCFGGGEFGQLGLG-TLVFVADSPV 285
Score = 97 (39.2 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 150 WTFGLGENGQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
++FG +G+LG Q A P++V+ L ++ V CG HT ++ +++ +G
Sbjct: 211 YSFGESADGRLGLSAHQLANHSYPQRVESLHS---VLQVACGGKHTLALTE-DELYCFGG 266
Query: 208 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
E G LGL +L D SP+ + H K + V CG H+ L+TD G
Sbjct: 267 GEFGQLGL---GTLVF--VAD--SPVAVG----HFRKGR-VTHVTCGEQHSALITDSGL- 313
Query: 266 LWSWGRGRSGVLGTG 280
L+++G GR G LG G
Sbjct: 314 LYTFGDGRHGKLGHG 328
Score = 95 (38.5 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 33/114 (28%), Positives = 50/114 (43%)
Query: 25 MWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 82
M G +PD+ F S +++ PS +W V ++CG H SA T +G
Sbjct: 1 MTGETEIPDTGAVFTFGKSKIANNVPSRLW-LKSDIPVHISCGQSH-----SAFVTEQGR 54
Query: 83 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
V +G NN GQLGL + +P ++ + V CG+ HT + T
Sbjct: 55 LFV---FGDNNRGQLGLQIKGPVTKPVCVKVLKGER---AQSVACGTDHTLVST 102
Score = 84 (34.6 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVACG 65
+ G S + G L+++G+ ++ + G + T P V G VACG
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGD----NNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACG 94
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
++H LVS T +GE L G N++GQLGLG + + + F +P + +
Sbjct: 95 TDHT--LVS---TSQGEILAA---GGNSDGQLGLGHCNDSISFQRLRPFCDYAP--IKLL 144
Query: 126 TCGSFHTALLTHRKR 140
+ G +A LT R
Sbjct: 145 SAGDHTSAALTEDGR 159
Score = 49 (22.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 297 TEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKL 338
T+E +++E N + +E ++D EG E EK +EE KL
Sbjct: 1293 TKEEEEEE-NNEEMKEENSSED-EGEESVREKEEQEVEEEKL 1332
Score = 46 (21.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 299 EFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMK 337
E +Q+E G D+E + ++ E + ++E+ EEMK
Sbjct: 1269 EGEQEESEVGNEDEENQEEEEEN-QTKEEEEEENNEEMK 1306
Score = 42 (19.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 301 KQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQS 341
++ E GG ++E + + + +EE ++ S EE + Q+
Sbjct: 1408 RETEEEEGGEEEEEEAEQKDTSEEEEQAEESEEEEEETEQN 1448
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 335
EE K++ + ++ ++ K+ + EE EKLS E
Sbjct: 1303 EEMKEENSSEDEGEESVREKEEQEVEE--EKLSEEGSE 1338
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 278 GTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMK 337
GT K I+ AP L++E + T DD + +E +E +SA E
Sbjct: 474 GTPKHINTDAPVDTSITVLSKEPSFTPI-TKSPDD---CQCVETSENSLSDKNSAGREEN 529
Query: 338 LLQSKLSVMERYASILHGSI 357
+ Q L + AS+ H SI
Sbjct: 530 VFQQALPTELQVASVSHPSI 549
Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 298 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGS 356
E +DE + ++DE KT D E E +E E + ++ S E S +GS
Sbjct: 1202 ERESEDEDSERQIEDEEKT-DAEEGESSNEGEPERSESEDVSKNDRSDEEEGESEENGS 1259
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 302 QDELNTGGLDDEIKTKDLEGAEERDE 327
+ E + GG D +++++E +E ++E
Sbjct: 1163 EGEKSKGGSGDMAESEEVEESEGQEE 1188
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 168 (64.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 65/227 (28%), Positives = 101/227 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV---SSFTPSPVWDFHGHTVV 60
I S+ +G SL + ++ WG + GG V SS SP D + +
Sbjct: 178 IISIVSGYEHSLVVTKDDGIYGWGR---NHKNQLGGRERVKDKSSSPSSPSEDEYYSKPI 234
Query: 61 KVACGSEHVVA---LVSAGETYK---GEDLVCYSWGANNNGQLGLG----DRESRLRPKI 110
KV ++ + + +G + G D YSWG G LG G D+E+ PK
Sbjct: 235 KVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKK 294
Query: 111 IETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--TQS 167
I TF ++ + ++ CG +H+ LT ND + +TFG GE GQLGHG T +
Sbjct: 295 ITTFTLNNNESRIVDIACGGYHSMFLT-----ND---NEIYTFGYGEFGQLGHGENDTLN 346
Query: 168 ALVPEQVKELPQYVY---LVSVDCGLFHTSV-VSSAGDVWSWGMEKG 210
+P+++K + S+ G S +++ G V+SWG G
Sbjct: 347 HYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDG 393
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 50/212 (23%), Positives = 89/212 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPD-SSTEGGFSLVSSFTPSPVWDF----HGH 57
+ICS G +L + N G+L+ WGN G + +TP + F +
Sbjct: 249 KICS---GSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNES 305
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKIIETFN 115
+V +ACG H + L + E Y ++G GQLG G+ ++ PK I++
Sbjct: 306 RIVDIACGGYHSMFLTNDNEIY--------TFGYGEFGQLGHGENDTLNHYIPKRIKSTG 357
Query: 116 QDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
++ + + G H + +++G + G LGHGT ++ P+++
Sbjct: 358 DNAAGNKIKSIFAGD-------HANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI 410
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+ L + S G HT S D++ +G
Sbjct: 411 QSLSNIKKITS---GFKHTLAQSINNDIYVFG 439
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 62/255 (24%), Positives = 110/255 (43%)
Query: 59 VVKVACGSEHVVALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDR------------ES 104
V K+ +++++++VS E +D Y WG N+ QLG +R E
Sbjct: 168 VYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSED 227
Query: 105 RLRPKIIETFNQDSP-WAVYEVTC-GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
K I+ + P + ++ C GS H LL ND +++G G G LGH
Sbjct: 228 EYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLG-----ND---GSLYSWGNGYFGALGH 279
Query: 163 GT----TQSALVPEQVKELP---QYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGL 213
G ++ P+++ +V + CG +H+ +++ +++++G E G LG
Sbjct: 280 GVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGH 339
Query: 214 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 273
N +L I +G+ G K + A A++ +T DG ++SWG
Sbjct: 340 GENDTLNHYIP----KRIKSTGDNAAGNKIKSIF--AGDHANSFYITTDG-SVYSWGWND 392
Query: 274 SGVLGTGKTIDFFAP 288
G LG G + ++P
Sbjct: 393 GGSLGHGTNENHYSP 407
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 63/223 (28%), Positives = 100/223 (44%)
Query: 73 VSAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 131
+SA E Y + + +G N + LG GD +S L PK +E CG
Sbjct: 29 ISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEAL------------CGK-R 75
Query: 132 TALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDC 188
L++ P+ +L + + G NG QLG+GTT + P QV +V V C
Sbjct: 76 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVAC 135
Query: 189 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 248
G H+ +++ G++++WG G + S T N+ +P ++ N H K V
Sbjct: 136 GSHHSMALAADGELFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLHTKKV---VN 185
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ACG ++ V D G +++ WG +G LG G + P V
Sbjct: 186 IACGQTSSMAVLDSG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G G+T + P +V +V++ CG + V +G+V+ W
Sbjct: 148 ELFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L G+ ++P+ ++ HG Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HGVCVN---QIVCGYAHTLALTDEGL- 253
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVL 292
L++WG G LGTG + +P ++
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIM 280
Score = 156 (60.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/139 (32%), Positives = 64/139 (46%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G L+ WG NC G S + TP V + H
Sbjct: 127 VKQVVEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHTK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 KVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHGV 233
Query: 118 SPWAVYEVTCGSFHTALLT 136
V ++ CG HT LT
Sbjct: 234 ---CVNQIVCGYAHTLALT 249
Score = 153 (58.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGV---CVNQIVCGYAHTLALTD--------E 251
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G+ + L P Q+ + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMW 310
Query: 206 GMEKG 210
G +G
Sbjct: 311 GQCRG 315
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 77/307 (25%), Positives = 128/307 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V ++ AI + G + WG D G+S T P + ++
Sbjct: 175 RVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVL--GYSDSQKRTAEPT-QMRLPEICQL 231
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR----LRPKIIETFNQDS 118
A G++H++AL + G+ Y +WG QLG E R L P+ + N
Sbjct: 232 ATGTDHIIALTTTGKVY--------TWGNGQQFQLGRRMLERRRLQGLTPQPLALKN--- 280
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG---HGTTQSALV--PEQ 173
+ V GS+H+ + ++ R + +GL Q G + A++ P
Sbjct: 281 ---IISVGAGSYHSFAIDNKGR--------VYAWGLNITRQCGIEVEDEEEGAVITKPTL 329
Query: 174 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNA---SLTRNEAGDAI 228
V L Y + S+ G HT + G V +WG + LG+ NA ++ ++E G+
Sbjct: 330 VDALEGY-NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNY 388
Query: 229 ---SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI-D 284
+P +I G + +QV CG H + VT DG K++SWG + +G G D
Sbjct: 389 YLSTPTIIPG-------LTNVIQVVCGTHHNLAVTSDG-KVYSWGSAENYEVGQGDNDED 440
Query: 285 FFAPAIV 291
P +V
Sbjct: 441 VAVPTLV 447
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 79/291 (27%), Positives = 125/291 (42%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSP--VWDF---- 54
+++ V AG + +G L +W PL T GG L + P P V F
Sbjct: 338 TEVVQVAAGRTQKAGVTRSGRLILWEAPPL---GTGGGTLLPGAVELPQPQFVSRFLEGQ 394
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 395 SGVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGSLTDISQPTIVEAL 446
Query: 115 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
+ + +V CG+ H L+ E W G G+ G+LG GT +S P+QV
Sbjct: 447 ---LGYEMVQVACGASHVLALSADG------ELFAW--GRGDGGRLGLGTRESHNCPQQV 495
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGL-CPNAS---LTRNEAGDAI 228
+P V CG+ + +++S G V + G + LGL C + + + +A+
Sbjct: 496 PMVPGQE-AQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEAL 554
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
S + G+ P + + V G AH+ VT G +++G + G LGT
Sbjct: 555 SFTPL-GSAPLDR--ETLLCVDLGTAHSAAVTASG-ACYTFGSNQHGQLGT 601
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/232 (26%), Positives = 99/232 (42%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKII 111
D T+V+ G E V A D ++WG + G+LGLG RES P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQV 495
Query: 112 ETF-NQDSPWAVYEVTCGSFHTA---LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 167
Q++ V + C T+ +L + L C + E + H +
Sbjct: 496 PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSL---EEEPVPHQQVEE 552
Query: 168 ALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
AL + P L+ VD G H++ V+++G +++G + G +S + A
Sbjct: 553 ALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQH-GQLGTSSRRVSRA-- 609
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
P + G G K V VACG A TV + +G +++SWG+G G LG
Sbjct: 610 ---PCRVQGL--EGIKM---VMVACGDAFTVAIGAEG-EVYSWGKGARGRLG 652
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G LA+ G L+ WG D G + S P V G +V
Sbjct: 450 EMVQVACGASHVLALSADGELFAWGR---GDGGRLGLGTRESHNCPQQVPMVPGQEAQRV 506
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG----DRESRLRPKIIETFN--- 115
CG + + L S G L C G+N +LGL + E ++ E +
Sbjct: 507 VCGIDCSMILTSPGRV-----LAC---GSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTP 558
Query: 116 -QDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
+P + C G+ H+A +T C+TFG ++GQLG + + + P
Sbjct: 559 LGSAPLDRETLLCVDLGTAHSAAVT--------ASGACYTFGSNQHGQLGTSSRRVSRAP 610
Query: 172 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+V+ L + + +V V CG T + + G+V+SWG
Sbjct: 611 CRVQGL-EGIKMVMVACGDAFTVAIGAEGEVYSWG 644
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G G+T + P +V +V++ CG + V +G+V+ W
Sbjct: 148 ELFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGW 205
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L G+ ++P+ ++ HG Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HGMCVN---QIVCGYAHTLALTDEGL- 253
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVL 292
L++WG G LGTG + +P ++
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIM 280
Score = 164 (62.8 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 59/219 (26%), Positives = 99/219 (45%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
SA E Y ++ + +G N + LG GD +S L PK +E + ++ GS
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKK---IKSLSYGSGPH 86
Query: 133 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 192
LLT + + + +G QLG+GTT + P QV ++ V CG H
Sbjct: 87 VLLTTE-------DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHH 139
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 252
+ +++ G++++WG G + S T N+ +P ++ N H + V +ACG
Sbjct: 140 SMALAADGELFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLHTKRV---VNIACG 189
Query: 253 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++ V D G +++ WG +G LG G + P V
Sbjct: 190 QTSSMAVLDSG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 45/139 (32%), Positives = 64/139 (46%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G L+ WG NC G S + TP V + H
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHTK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHG- 232
Query: 118 SPWAVYEVTCGSFHTALLT 136
V ++ CG HT LT
Sbjct: 233 --MCVNQIVCGYAHTLALT 249
Score = 155 (59.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHG---MCVNQIVCGYAHTLALTD--------E 251
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G+ + L P Q+ + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMW 310
Query: 206 GMEKG 210
G +G
Sbjct: 311 GQCRG 315
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 119 (46.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 180 FSWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMAEVAAGGWHSVCVSETGDIYIWGWNE 238
Query: 209 KGLGLCPNASLTRNEAGDAIS 229
G P +L E G+ ++
Sbjct: 239 SGQLALPTRNLA--EDGETVA 257
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G VK +CGS H + GE Y +WG GQLG D S RP+ +E F
Sbjct: 297 GSDAVKASCGSRHTAVVTRTGELY--------TWGWGKYGQLGHEDTTSLDRPRRVEYF- 347
Query: 116 QDSPWAVYEVTCGSFHT 132
D V VTCG ++T
Sbjct: 348 VDKQLQVKAVTCGPWNT 364
Score = 98 (39.6 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 124
G+EH + L +AG+ + SWG +GQLG G E+ L P+++E Q A E
Sbjct: 166 GAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMA--E 214
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 168
V G +H+ ++ D+ W G E+GQL T A
Sbjct: 215 VAAGGWHSVCVSET---GDIY---IW--GWNESGQLALPTRNLA 250
Score = 90 (36.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P
Sbjct: 295 PMGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRP 341
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 221
+LP V CG HT+VV+ G++++WG K G LG SL R
Sbjct: 293 DLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDR 340
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWG 27
+ V AGG S+ + G +++WG
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWG 235
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 119 (46.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 180 FSWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMAEVAAGGWHSVCVSETGDIYIWGWNE 238
Query: 209 KGLGLCPNASLTRNEAGDAIS 229
G P +L E G+ ++
Sbjct: 239 SGQLALPTRNLA--EDGETVA 257
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G VK +CGS H + GE Y +WG GQLG D S RP+ +E F
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGELY--------TWGWGKYGQLGHEDTTSLDRPRRVEYF- 349
Query: 116 QDSPWAVYEVTCGSFHT 132
D V VTCG ++T
Sbjct: 350 VDKQLQVKAVTCGPWNT 366
Score = 98 (39.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 124
G+EH + L +AG+ + SWG +GQLG G E+ L P+++E Q A E
Sbjct: 166 GAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMA--E 214
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 168
V G +H+ ++ D+ W G E+GQL T A
Sbjct: 215 VAAGGWHSVCVSET---GDIY---IW--GWNESGQLALPTRNLA 250
Score = 90 (36.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P
Sbjct: 297 PMGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRP 343
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVY 182
+ +CGS HTA++T R ++ +T+G G+ GQLGH T S P +V+ + + +
Sbjct: 304 KASCGSRHTAVVT---RTGEL-----YTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQ 355
Query: 183 LVSVDCGLFHTSV 195
+ +V CG ++T V
Sbjct: 356 VKAVTCGPWNTYV 368
Score = 77 (32.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/96 (27%), Positives = 40/96 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
++ G +L +D AG ++ WG G +L + P + G + +VA G
Sbjct: 163 LELGAEHALLLDAAGQVFSWGG---GRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
H V + G+ Y WG N +GQL L R
Sbjct: 220 WHSVCVSETGDIY--------IWGWNESGQLALPTR 247
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 221
+LP V CG HT+VV+ G++++WG K G LG SL R
Sbjct: 295 DLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDR 342
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWG 27
+ V AGG S+ + G +++WG
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWG 235
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 172 (65.6 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 65/243 (26%), Positives = 101/243 (41%)
Query: 33 DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN 92
DS T G +L P+P + H V++ G +A + +WG N
Sbjct: 747 DSVTNGAPTLPP---PAPKPEQHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGN 803
Query: 93 NNGQLGLGDRESRLRPKIIETFNQDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWT 151
GQ G+G +I D W A+ ++ CG FH+A + + WT
Sbjct: 804 RFGQCGVGHSF-----RIANLHQVDGDWPAIEKIACGQFHSAFICS--------DGSLWT 850
Query: 152 FGLGENGQLGHG--TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
FG G GQLGHG + LVP +V L + + CG HT V++ G V
Sbjct: 851 FGWGVWGQLGHGGRNNSNQLVPTRVNGL--ICKVTQIACGRAHTVVLTDTGRVL------ 902
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWS 268
+C + S + D I + P GP + +D +A H++ +T+D +++
Sbjct: 903 ---VCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRD---IATHYYHSICITEDN-RVFE 955
Query: 269 WGR 271
WGR
Sbjct: 956 WGR 958
Score = 134 (52.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 53/189 (28%), Positives = 94/189 (49%)
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 242
+VSV CGL H+++++S G +++WG KGL + L + + P + P+G K
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWG--KGL----DYQLGHGNKNERMEPHQVFE--PNGAK 1075
Query: 243 FQDPVQVACGAAHTVLVTDDGYKLWSWGR---GRSGVLG--TGKTID----FFAPAIV-- 291
+ V V+ G HT+ TDDG +++WG+ G+ GVL G + D FF A
Sbjct: 1076 W---VNVSLGNNHTIASTDDG-SVFAWGKNDFGQCGVLTKKNGNSADVTKKFFFQARDGR 1131
Query: 292 LWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS 351
+ P +E + GL +++ ++L E+ +E + +L S ++V++ +
Sbjct: 1132 RFMPNVDE--SQFVQKPGLIPDVRVRNLN--EDGNEGVDKEEIVDRLKASDVNVVQAVSK 1187
Query: 352 ILHGSIFGK 360
L+ I GK
Sbjct: 1188 HLYSPIEGK 1196
Score = 38 (18.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 16/90 (17%), Positives = 33/90 (36%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ + G ++ + + G + + G+ + V +FTP P+ V +
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDI 937
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGAN 92
A H + + ED + WG N
Sbjct: 938 ATHYYHSICIT--------EDNRVFEWGRN 959
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 60/192 (31%), Positives = 87/192 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
YS G N+ GQLG +S RP+ I+ N V V+CG H+ + H+ +
Sbjct: 44 YSCGDNSWGQLGQRRDQSTERPEPIQALND---LHVDLVSCGKEHSVAVCHKGKV----- 95
Query: 147 SMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
W G G GQLG G + + +P ++K L + ++ V CG +H+ +S G V+SW
Sbjct: 96 -FAW--GAGSEGQLGIGEFKEISFMPTKIKALAG-IKIIQVSCGHYHSLALSEDGHVFSW 151
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G L L +N AI + S G P QVA G H+ ++ G
Sbjct: 152 GRNSEGQL----GLGKNSRSQAIPQKVKSLEGI--PL----AQVAAGGTHSFALSLTGTS 201
Query: 266 LWSWGRGRSGVL 277
+ WG RSG L
Sbjct: 202 -FGWGSNRSGQL 212
Score = 148 (57.2 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 53/202 (26%), Positives = 92/202 (45%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G S+A+ + G ++ WG G F +S F P+ + G +++V+CG
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWG-AGSEGQLGIGEFKEIS-FMPTKIKALAGIKIIQVSCGH 136
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEV 125
H +AL ED +SWG N+ GQLGLG + S+ P+ +++ + P A +V
Sbjct: 137 YHSLAL--------SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL-EGIPLA--QV 185
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGL-GENGQLGHGTTQSALVPEQVKELPQYVYLV 184
G H+ L+ S W G+ G+ + P + L + ++
Sbjct: 186 AAGGTHSFALSLTGT------SFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN-LSVI 238
Query: 185 SVDCGLFHTSVVSSAGDVWSWG 206
+ CG HT+V++ G V+++G
Sbjct: 239 YISCGYEHTAVLTEEGQVFTFG 260
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/208 (27%), Positives = 88/208 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G SLA+ G ++ WG + G + S P V G + +V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNS--EGQLGLGKNSRSQAIPQKVKSLEGIPLAQV 185
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-GDR--ESRLRPKIIETFNQDSP 119
A G H AL G ++ WG+N +GQL L G++ E +P I S
Sbjct: 186 AAGGTHSFALSLTGTSF--------GWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLS- 236
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
+Y ++CG HTA+LT E +TFG +GQL P+ ++ +
Sbjct: 237 -VIY-ISCGYEHTAVLTE--------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG 286
Query: 180 YVYLVSVDCGLFHT-SVVSSAGDVWSWG 206
V ++C +HT + V + G V S G
Sbjct: 287 RVS--QIECASYHTIAYVYTTGQVVSLG 312
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/135 (34%), Positives = 67/135 (49%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQ-YVYLVSVDCGLFHTSVVSSAGDVWSWGM- 207
+ G+N GQLG QS PE ++ L +V LVS CG H+ V G V++WG
Sbjct: 44 YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS--CGKEHSVAVCHKGKVFAWGAG 101
Query: 208 -EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
E LG+ ++ P I G K +QV+CG H++ +++DG+ +
Sbjct: 102 SEGQLGIGEFKEIS-------FMPTKIKALA--GIKI---IQVSCGHYHSLALSEDGH-V 148
Query: 267 WSWGRGRSGVLGTGK 281
+SWGR G LG GK
Sbjct: 149 FSWGRNSEGQLGLGK 163
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 41/158 (25%), Positives = 78/158 (49%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVKELPQY 180
+ +V+CG +H+ L+ + +++G GQLG G ++S +P++VK L +
Sbjct: 129 IIQVSCGHYHSLALSE--------DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL-EG 179
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI-SPILISGNGPH 239
+ L V G H+ +S G + WG + L +L+ N+ + I P I
Sbjct: 180 IPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL----ALSGNKVKEQIYKPHSIGAL--- 232
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 277
K + ++CG HT ++T++G +++++G SG L
Sbjct: 233 --KNLSVIYISCGYEHTAVLTEEG-QVFTFGGNSSGQL 267
Score = 112 (44.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-R 102
S+ P P+ + V V+CG EH VA+ +KG+ ++WGA + GQLG+G+ +
Sbjct: 61 STERPEPIQALNDLHVDLVSCGKEHSVAVC-----HKGK---VFAWGAGSEGQLGIGEFK 112
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 159
E P I+ + + +V+CG +H+ L+ + GLG+N +
Sbjct: 113 EISFMPTKIKAL---AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR 166
Score = 85 (35.0 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 35/129 (27%), Positives = 56/129 (43%)
Query: 151 TFGLGEN--GQL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+FG G N GQL G+ + P + L + ++ + CG HT+V++ G V+++
Sbjct: 201 SFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN-LSVIYISCGYEHTAVLTEEGQVFTF 259
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G L P+ +G P LI G G Q+ C + HT+ +
Sbjct: 260 GGNSSGQLQPSP-----RSGQR-GPQLIEGIGGRVS------QIECASYHTIAYVYTTGQ 307
Query: 266 LWSWGRGRS 274
+ S GRG S
Sbjct: 308 VVSLGRGPS 316
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 170 (64.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 63/220 (28%), Positives = 93/220 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G S+A+ G ++ WG G S +P V G + +V
Sbjct: 129 KIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGL--GKEFPSQASPQRVRSLEGIPLAQV 186
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES---RLRPKIIETFNQDSP 119
A G H AL +G ++ WG+N+ GQL L + R +P I
Sbjct: 187 AAGGHHSFALSLSGTSF--------GWGSNSAGQLALSGNNAPVQRYKPVSIGALKT--- 235
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V ++CG HTA+LT + +TFG GQLGH T P+ V+ +
Sbjct: 236 LGVVSISCGYKHTAVLTQ--------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEG 287
Query: 180 YVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNAS 218
V +DCG HT + + + G V S+G +G G C + S
Sbjct: 288 LVS--QIDCGSDHTLAYIYTTGQVVSFG--RGPG-CASRS 322
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 56/205 (27%), Positives = 93/205 (45%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V G SLA+ + G ++ WG G F ++F P + G +++VA
Sbjct: 77 VALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFK-ETTFIPKKIKTLAGIKIIQVA 134
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAV 122
CG H VAL G+ + SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 135 CGHYHSVALSEDGQVF--------SWGTNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA- 184
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCW-TFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
+V G H+ L+ S W + G+ G+ P + L + +
Sbjct: 185 -QVAAGGHHSFALSLSGT------SFGWGSNSAGQLALSGNNAPVQRYKPVSIGAL-KTL 236
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWG 206
+VS+ CG HT+V++ G V+++G
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFG 261
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 54/191 (28%), Positives = 86/191 (45%)
Query: 64 CGSEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGL-----GDRESRLRPKIIETFN 115
C + + ++GE + D S G N+ GQLG G++ R+ P + ET N
Sbjct: 19 CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PAL-ETLN 76
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQV 174
V V+CG H+ + H+ R W G GQLG G ++ +P+++
Sbjct: 77 ------VALVSCGKEHSLAVCHKGRV------FAW--GAASEGQLGIGEFKETTFIPKKI 122
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL-CPN-ASLTRNEAGDAI 228
K L + ++ V CG +H+ +S G V+SWG GLG P+ AS R + + I
Sbjct: 123 KTLAG-IKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 229 SPILISGNGPH 239
++ G H
Sbjct: 182 PLAQVAAGGHH 192
Score = 134 (52.2 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 180
+ +V CG +H+ L+ + +++G +GQLG G S P++V+ L +
Sbjct: 130 IIQVACGHYHSVALSE--------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL-EG 180
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPH 239
+ L V G H+ +S +G + WG L +L+ N A P+ I
Sbjct: 181 IPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL----ALSGNNAPVQRYKPVSIGALKTL 236
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G V ++CG HT ++T DG K++++G G LG T + P +V
Sbjct: 237 GV-----VSISCGYKHTAVLTQDG-KVFTFGDNSYGQLGHDPTAEKRGPQLV 282
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 44/131 (33%), Positives = 62/131 (47%)
Query: 155 GEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKG 210
G+N GQLG T PE++ L + + + V CG H+ V G V++WG E
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPAL-ETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQ 106
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
LG+ T P I G K +QVACG H+V +++DG +++SWG
Sbjct: 107 LGIGEFKETT-------FIPKKIKTLA--GIKI---IQVACGHYHSVALSEDG-QVFSWG 153
Query: 271 RGRSGVLGTGK 281
G LG GK
Sbjct: 154 TNSHGQLGLGK 164
Score = 71 (30.1 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-----GDRESRLRPKI 110
G+T+++ A G H + L+S G C G N+ GQLG G++ R+ P +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQS-----C---GDNSRGQLGRKGTPRGEQPERI-PAL 72
Query: 111 IETFNQDSPWAVYEVTCGSFHTALLTHRKR 140
ET N V V+CG H+ + H+ R
Sbjct: 73 -ETLN------VALVSCGKEHSLAVCHKGR 95
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 51/153 (33%), Positives = 72/153 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG N+ GQLGL D + R P I+ VY ++CG HTA LT E
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK--VVY-ISCGEEHTAALTK--------E 260
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH +T++ +P +V EL + + CG HT + V S G ++++
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRRVMEL-MGTEVSQIACGRNHTLAFVPSTGLIYAF 319
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
G L G A SP+ +S P
Sbjct: 320 GCNT------QGQLGTGIRGSAKSPVPVSNIQP 346
Score = 151 (58.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+ G+N+ GQLG D+ RP+++ + + V+CG H+ + N+ +
Sbjct: 56 YTCGSNSCGQLG-HDKGGS-RPELVGALDAQK---ISGVSCGQAHSLAV------NEQGQ 104
Query: 147 SMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
W G G+ GQLG GT + A+ VP +K+L ++ + V CG H +S G ++ W
Sbjct: 105 VFAW--GAGDGGQLGLGTAEEAVRVPRLIKKLCEH-RISQVMCGNHHCIALSKDGQLFVW 161
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGY 264
G E G L + E +SP P P+ Q++ G H+ ++ G
Sbjct: 162 G-ENSSG---QLGLGKGEPS-TLSP------QPLKSLCGIPLTQISAGGDHSFALSFSG- 209
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAP 288
++ WG+ +G LG D P
Sbjct: 210 AVFGWGKNSAGQLGLNDEQDRAVP 233
Score = 140 (54.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--VSSFTPSPVWDFHGHTVV 60
+I V G +A+ G L++WG +SS + G S+ +P P+ G +
Sbjct: 138 RISQVMCGNHHCIALSKDGQLFVWGE----NSSGQLGLGKGEPSTLSPQPLKSLCGIPLT 193
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+++ G +H AL +G + WG N+ GQLGL D + R P I+
Sbjct: 194 QISAGGDHSFALSFSGAVF--------GWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK-- 243
Query: 121 AVYEVTCGSFHTALLT 136
VY ++CG HTA LT
Sbjct: 244 VVY-ISCGEEHTAALT 258
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 84 LVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 142
++C WG++ GQLG+G E+ + P+ F+ + EV CG+ H+ L H
Sbjct: 2 MLC--WGSSGAGQLGIGASEASVFEPRSCCVFDGRG---LKEVACGNQHSLFLLH----- 51
Query: 143 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 202
+ +T G GQLGH S PE V L + V CG H+ V+ G V
Sbjct: 52 ---DGSVYTCGSNSCGQLGHDKGGSR--PELVGALDAQK-ISGVSCGQAHSLAVNEQGQV 105
Query: 203 WSWGMEKG--LGL 213
++WG G LGL
Sbjct: 106 FAWGAGDGGQLGL 118
Score = 115 (45.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 42/134 (31%), Positives = 60/134 (44%)
Query: 152 FGLGEN--GQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
F GEN GQLG G + S L P+ +K L + L + G H+ +S +G V+ WG
Sbjct: 159 FVWGENSSGQLGLGKGEPSTLSPQPLKSLCG-IPLTQISAGGDHSFALSFSGAVFGWGKN 217
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
L N+ D P I + Q V ++CG HT +T +G L++
Sbjct: 218 SA------GQLGLNDEQDRAVPCHIKFL-----RSQKVVYISCGEEHTAALTKEG-GLFT 265
Query: 269 WGRGRSGVLGTGKT 282
+G G G LG T
Sbjct: 266 FGNGSKGQLGHDST 279
Score = 113 (44.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 61
+I V G SLA++ G ++ WG D G G + + P + H + +
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWG---AGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQ 141
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIET 113
V CG+ H +AL G+ + WG N++GQLGLG E S L P+ +++
Sbjct: 142 VMCGNHHCIALSKDGQLFV--------WGENSSGQLGLGKGEPSTLSPQPLKS 186
Score = 105 (42.0 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
FG G+N GQLG Q VP +K L +V + CG HT+ ++ G ++++G
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK-VVYISCGEEHTAALTKEGGLFTFGNGS 270
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
KG LG TRNE P+ G + Q+ACG HT+ ++
Sbjct: 271 KGQLG----HDSTRNE------PLPRRVMELMGTEVS---QIACGRNHTLAFVPSTGLIY 317
Query: 268 SWGRGRSGVLGTG 280
++G G LGTG
Sbjct: 318 AFGCNTQGQLGTG 330
Score = 102 (41.0 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G SL + + G+++ G+ +S + G S P V + V+CG
Sbjct: 39 VACGNQHSLFLLHDGSVYTCGS----NSCGQLGHDKGGS-RPELVGALDAQKISGVSCGQ 93
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEV 125
H +A+ G+ + +WGA + GQLGLG E +R P++I+ + + +V
Sbjct: 94 AHSLAVNEQGQVF--------AWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR---ISQV 142
Query: 126 TCGSFHTALLT 136
CG+ H L+
Sbjct: 143 MCGNHHCIALS 153
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 39 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
G S S F P F G + +VACG++H + L+ G Y C G+N+ GQLG
Sbjct: 16 GASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVY-----TC---GSNSCGQLG 67
Query: 99 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
D+ RP+++ + + V+CG H+
Sbjct: 68 -HDKGGS-RPELVGALDAQK---ISGVSCGQAHS 96
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G G+T + P +V +VS+ CG + V G+V+ W
Sbjct: 177 EVFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 234
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 235 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 282
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVL 292
L++WG G LGTG + +PA ++
Sbjct: 283 LYAWGANTYGQLGTGNKNNLLSPAHIM 309
Score = 165 (63.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
SA E Y ++ + +G N + LG GD +S L PK +E CG
Sbjct: 59 SANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEAL------------CGK-KI 105
Query: 133 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
L++ P+ +L + + G NG QLG+GTT + P QV +V V CG
Sbjct: 106 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACG 165
Query: 190 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 249
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 166 SHHSMALAADGEVFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLH---IKRVVSI 215
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 216 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 256
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/139 (31%), Positives = 63/139 (45%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G ++ WG NC G S + TP V + H
Sbjct: 156 IKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHIK 210
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 211 RVVSIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHSV 262
Query: 118 SPWAVYEVTCGSFHTALLT 136
V ++ CG HT LT
Sbjct: 263 ---CVNQIVCGYAHTLALT 278
Score = 149 (57.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 280
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 281 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMW 339
Query: 206 GMEKG 210
G +G
Sbjct: 340 GQCRG 344
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+ ++ S+ G S+A+ + G ++ WG + G + + TP V H V
Sbjct: 209 IKRVVSIACGQTSSMAVLDNGEVYGWG---YNGNGQLGLGNNGNQLTPVRVAALHSVCVN 265
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ CG H +AL G + Y+WGAN GQLG G++ + L P I +
Sbjct: 266 QIVCGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE---- 313
Query: 121 AVYEVT-CGSFHTA 133
V E+ C S HT+
Sbjct: 314 RVVEIAACHSAHTS 327
Score = 106 (42.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 52/188 (27%), Positives = 79/188 (42%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 234 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 290
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 270
L + +SP I + + V++A C +AHT G ++ WG
Sbjct: 291 ----YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Query: 271 --RGRSGVLGT----GKTIDFFA----PAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
RG+S L T D FA PA+ W L+ E +D L + +K K+ +
Sbjct: 341 QCRGQSVTLPHLTHFSSTDDVFACFATPAVT-WRLLSVEH-EDFLTVA---ESLK-KEFD 394
Query: 321 GAEERDEK 328
E D K
Sbjct: 395 SPETADLK 402
Score = 98 (39.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
S +G + L+ ++ G ++ WG+ L + +T G + + T + VV+V
Sbjct: 109 SYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQVVEV 162
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS H +AL + GE + +WG NN GQ+G G ++ P+ + V
Sbjct: 163 ACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVTNCLHIK--RV 212
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 158
+ CG + + + GLG NG
Sbjct: 213 VSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG 248
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 163 (62.4 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G +GQ+G G+T + +P +V Q ++++ CG + V G+V+ W
Sbjct: 172 EVFAW--GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVW 229
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L +G+ +P ++ G + Q +VACG AHT+++TD+G +
Sbjct: 230 GYN---G---NGQLGLGSSGNQPTPCRVAAL--QGIRVQ---RVACGYAHTLVLTDEG-Q 277
Query: 266 LWSWGRGRSGVLGTG 280
+++WG G LGTG
Sbjct: 278 IYAWGANSYGQLGTG 292
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/196 (28%), Positives = 93/196 (47%)
Query: 90 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTALLTHRKRPNDMLESM 148
G N +G LG+GD +S + P+ +++ + ++ GS H L T +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKK---IASLSYGSGPHIVLAT--------TDGE 119
Query: 149 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+T+G QLG+GTT LVP + ++ V CG +H+ V++S G+V++WG
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN 179
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKL 266
G + S T N+ P ++G Q+ V +ACG ++ V D G ++
Sbjct: 180 NS-GQVGSGS-TANQP----IPRRVTGC------LQNKVVMNIACGQMCSMAVVDTG-EV 226
Query: 267 WSWGRGRSGVLGTGKT 282
+ WG +G LG G +
Sbjct: 227 YVWGYNGNGQLGLGSS 242
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 60
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWGY------NGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + +D
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYPTPV-VVEKDR-- 309
Query: 121 AVYEVT-CGSFHTA 133
+ E+ C S HT+
Sbjct: 310 -IIEIAACHSAHTS 322
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 41/135 (30%), Positives = 56/135 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK 61
Q+ V G SL + + G ++ WG +S G S + P V V+
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWG---YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMN 209
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
+ACG +A+V GE Y WG N NGQLGLG ++ P +
Sbjct: 210 IACGQMCSMAVVDTGEVYV--------WGYNGNGQLGLGSSGNQPTPCRVAALQGIR--- 258
Query: 122 VYEVTCGSFHTALLT 136
V V CG HT +LT
Sbjct: 259 VQRVACGYAHTLVLT 273
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 38/125 (30%), Positives = 51/125 (40%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG ++ P + V V CG HT +LT E
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTD--------E 275
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ +G GQLG G + P V + ++ C HTS + G V+ W
Sbjct: 276 GQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAA-CHSAHTSAAKTQGGHVYMW 334
Query: 206 GMEKG 210
G +G
Sbjct: 335 GQCRG 339
Score = 113 (44.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 51/182 (28%), Positives = 78/182 (42%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+ +G NGQLG G++ + P +V L Q + + V CG HT V++ G +++WG
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAAL-QGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 210 -G-LGLCPNASLTRNEAGDAI-SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
G LG T N++ + +P+++ K + AC +AHT G +
Sbjct: 286 YGQLG-------TGNKSNQSYPTPVVVE-------KDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 267 WSWG--RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTG-GLDDEIKT 316
+ WG RG+S +L T FA V W L+ E D L L E
Sbjct: 332 YMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWRLLSVE-PDDHLTVAESLKREFDN 390
Query: 317 KD 318
D
Sbjct: 391 PD 392
Score = 100 (40.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 36/126 (28%), Positives = 59/126 (46%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
S +G + LA + G ++ WG+ L + +T G LV + + V++V
Sbjct: 104 SYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHG--LVPCHIST---NLSNKQVIEV 157
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+ V
Sbjct: 158 ACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK--VV 207
Query: 123 YEVTCG 128
+ CG
Sbjct: 208 MNIACG 213
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 164 (62.8 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 59/193 (30%), Positives = 87/193 (45%)
Query: 90 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 149
G N G LGLGD +S + P+ +++ N A G H L T E
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLN-GKKIACLSYGSGP-HIVLAT--------TEGEV 120
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G QLG+GTT LVP + ++ V CG +H+ V++S G+V++WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
G + S T N+ PI G K V +ACG + V D G +++ W
Sbjct: 181 S-GQVGSGS-TVNQ------PIPRRVTGCLQNKVV--VTIACGQMCCMAVVDTG-EVYVW 229
Query: 270 GRGRSGVLGTGKT 282
G +G LG G +
Sbjct: 230 GYNGNGQLGLGNS 242
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G +GQ+G G+T + +P +V Q +V++ CG V G+V+ W
Sbjct: 172 EVFAW--GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L +G+ +P ++ G + Q +VACG AHT+++TD+G +
Sbjct: 230 GYN---G---NGQLGLGNSGNQPTPCRVAAL--QGIRVQ---RVACGYAHTLVLTDEG-Q 277
Query: 266 LWSWGRGRSGVLGTG 280
+++WG G LGTG
Sbjct: 278 VYAWGANSYGQLGTG 292
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 54/173 (31%), Positives = 80/173 (46%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
L P I T N + V EV CGS+H+ +LT +D E W G +GQ+G
Sbjct: 137 NHGLVPCHIST-NLSNK-QVIEVACGSYHSLVLT-----SDG-EVFAW--GYNNSGQVGS 186
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME-KG-LGL 213
G+T + +P +V Q +V++ CG V G+V+ WG G LGL
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL 239
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/135 (31%), Positives = 58/135 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK 61
Q+ V G SL + + G ++ WG +S G S V+ P V VV
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWG---YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT 209
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
+ACG +A+V GE Y WG N NGQLGLG+ ++ P +
Sbjct: 210 IACGQMCCMAVVDTGEVYV--------WGYNGNGQLGLGNSGNQPTPCRVAALQGIR--- 258
Query: 122 VYEVTCGSFHTALLT 136
V V CG HT +LT
Sbjct: 259 VQRVACGYAHTLVLT 273
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
F LG N G LG G QS + P ++ L + + +S G H + ++ G+V++WG
Sbjct: 68 FVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHN 126
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
+ L + P IS N + + ++VACG+ H++++T DG ++++
Sbjct: 127 A------YSQLGNGTTNHGLVPCHISTNLSN----KQVIEVACGSYHSLVLTSDG-EVFA 175
Query: 269 WGRGRSGVLGTGKTID 284
WG SG +G+G T++
Sbjct: 176 WGYNNSGQVGSGSTVN 191
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/125 (30%), Positives = 52/125 (41%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++ P + V V CG HT +LT E
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTD--------E 275
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ +G GQLG G + P V + ++ C HTS + G V+ W
Sbjct: 276 GQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA-CHSTHTSAAKTQGGHVYMW 334
Query: 206 GMEKG 210
G +G
Sbjct: 335 GQCRG 339
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 60
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGY------NGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDR-- 309
Query: 121 AVYEVT-CGSFHTA 133
+ E+ C S HT+
Sbjct: 310 -IIEIAACHSTHTS 322
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 163 (62.4 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
SA E Y ++ + +G N + LG GD +S L PK +E CG
Sbjct: 30 SANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEAL------------CGK-KI 76
Query: 133 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
L++ P+ +L + + G NG QLG+GTT + P QV +V V CG
Sbjct: 77 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACG 136
Query: 190 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 249
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 137 SHHSMALAADGEVFAWGYNN-CGQVGSGSTT-NQP----TPRKVT-NCLH---IKRVVGI 186
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 187 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G G+T + P +V +V + CG + V G+V+ W
Sbjct: 148 EVFAW--GYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 253
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVL 292
L++WG G LGTG + +PA ++
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 251
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMW 310
Query: 206 GMEKG 210
G +G
Sbjct: 311 GQCRG 315
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/139 (31%), Positives = 63/139 (45%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G ++ WG NC G S + TP V + H
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHSV 233
Query: 118 SPWAVYEVTCGSFHTALLT 136
V ++ CG HT LT
Sbjct: 234 ---CVNQIVCGYAHTLALT 249
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+ ++ + G S+A+ + G ++ WG + G + + TP V H V
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWG---YNGNGQLGLGNNGNQLTPVRVAALHSVCVN 236
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ CG H +AL G + Y+WGAN GQLG G++ + L P I +
Sbjct: 237 QIVCGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE---- 284
Query: 121 AVYEVT-CGSFHTA 133
V E+ C S HT+
Sbjct: 285 RVVEIAACHSAHTS 298
Score = 107 (42.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 51/187 (27%), Positives = 77/187 (41%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 261
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 270
L + +SP I + + V++A C +AHT G ++ WG
Sbjct: 262 ----YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 271 --RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 321
RG+S VL T FA V W L+ E +D L + +K K+ +
Sbjct: 312 QCRGQSVVLPHLTHFSCTDDVFACFATPAVSWRLLSVEH-EDFLTVA---ESLK-KEFDS 366
Query: 322 AEERDEK 328
E D K
Sbjct: 367 PETADLK 373
Score = 97 (39.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
S +G + L+ ++ G ++ WG+ L + +T G + + T + VV+V
Sbjct: 80 SYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQVVEV 133
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 109
ACGS H +AL + GE + +WG NN GQ+G G ++ P+
Sbjct: 134 ACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTTNQPTPR 172
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 162 (62.1 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 61/220 (27%), Positives = 96/220 (43%)
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHT 132
SA G+ L C G N++ G D + RPK++E + +P +V G T
Sbjct: 175 SAFVLQSGQVLTC---GDNSSHCCGHLDTSRPIFRPKLVEAL-KGTPCK--QVAAGLHFT 228
Query: 133 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 192
L+ E +T G +GQLGHG T VP+ V+ L +V + G +
Sbjct: 229 VFLSR--------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280
Query: 193 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 252
V+ G V+S+G G C L E D + P +I G ++V+ G
Sbjct: 281 VLAVTQDGSVYSFG--SGSNFC----LGHGEQQDELQPRVIQAFKRKGIHI---LRVSAG 331
Query: 253 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
H V + +G ++++WG+G G LG G D P +++
Sbjct: 332 DEHAVALDSNG-RVYTWGKGYCGALGHGDENDKITPQVLV 370
Score = 135 (52.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 55/206 (26%), Positives = 87/206 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH--GHTVVK 61
+ + AG LA+ G+++ +G+ + G P + F G +++
Sbjct: 271 VVQIAAGPSYVLAVTQDGSVYSFGS---GSNFCLGHGEQQDELQPRVIQAFKRKGIHILR 327
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
V+ G EH VAL S G Y +WG G LG GD ++ P+++ N + A
Sbjct: 328 VSAGDEHAVALDSNGRVY--------TWGKGYCGALGHGDENDKITPQVLVNLN--NCLA 377
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQY 180
V +V T +L +L W G G G G + L P ++ L P
Sbjct: 378 V-QVCARKRKTFVLVE----GGLLYGFGW-MGFGSLGFPDRGVSDKVLRPRVLECLKPHR 431
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWG 206
V VS GL+HT VV+ G ++ +G
Sbjct: 432 VSQVST--GLYHTIVVTQRGRIFGFG 455
Score = 82 (33.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 28/91 (30%), Positives = 37/91 (40%)
Query: 46 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
F P V G +VA G V L G Y C G+N +GQLG GD R
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAY-----TC---GSNTHGQLGHGDTLDR 256
Query: 106 LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
PK++E P V ++ G + +T
Sbjct: 257 PVPKVVEFLKTIGP--VVQIAAGPSYVLAVT 285
Score = 81 (33.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-ME 208
+T+G G G LGHG + P+ + L + V V T V+ G ++ +G M
Sbjct: 345 YTWGKGYCGALGHGDENDKITPQVLVNLNNCL-AVQVCARKRKTFVLVEGGLLYGFGWMG 403
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LG P+ R + + P ++ PH QV+ G HT++VT G +++
Sbjct: 404 FGSLGF-PD----RGVSDKVLRPRVLECLKPHRVS-----QVSTGLYHTIVVTQRG-RIF 452
Query: 268 SWGRGRSGVLG 278
+G LG
Sbjct: 453 GFGDNERAQLG 463
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G G+T + P +V +V + CG + V G+V+ W
Sbjct: 148 EVFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 253
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVL 292
L++WG G LGTG + +PA ++
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
SA E Y ++ + +G N + LG GD +S L PK +E CG
Sbjct: 30 SASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGL------------CGK-KI 76
Query: 133 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
L++ P+ +L + + G NG QLG+GTT + P QV +V V CG
Sbjct: 77 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACG 136
Query: 190 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 249
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 137 SHHSMALAADGEVFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLH---IKRVVGI 186
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 187 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 251
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMW 310
Query: 206 GMEKG 210
G +G
Sbjct: 311 GQCRG 315
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/139 (31%), Positives = 63/139 (45%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G ++ WG NC G S + TP V + H
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHIK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHSV 233
Query: 118 SPWAVYEVTCGSFHTALLT 136
V ++ CG HT LT
Sbjct: 234 ---CVNQIVCGYAHTLALT 249
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+ ++ + G S+A+ + G ++ WG + G + + TP V H V
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWG---YNGNGQLGLGNNGNQLTPVRVAALHSVCVN 236
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ CG H +AL G + Y+WGAN GQLG G++ + L P I +
Sbjct: 237 QIVCGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE---- 284
Query: 121 AVYEVT-CGSFHTA 133
V E+ C S HT+
Sbjct: 285 RVVEIAACHSAHTS 298
Score = 106 (42.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 50/187 (26%), Positives = 77/187 (41%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 261
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 270
L + +SP I + + V++A C +AHT G ++ WG
Sbjct: 262 ----YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 271 --RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 321
RG+S +L T FA V W L+ E +D L + +K K+ +
Sbjct: 312 QCRGQSVILPHLTHFSCTDDVFACFATPAVSWRLLSVEH-EDFLTVA---ESLK-KEFDS 366
Query: 322 AEERDEK 328
E D K
Sbjct: 367 PETADLK 373
Score = 98 (39.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
S +G + L+ ++ G ++ WG+ L + +T G + V T + VV+V
Sbjct: 80 SYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQVVEV 133
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 109
ACGS H +AL + GE + +WG NN GQ+G G ++ P+
Sbjct: 134 ACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPR 172
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G G+T + P +V +V + CG + V G+V+ W
Sbjct: 148 EVFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 253
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVL 292
L++WG G LGTG + +PA ++
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 64/222 (28%), Positives = 99/222 (44%)
Query: 74 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
SA E Y + + +G N + LG GD S L PK +E CG
Sbjct: 30 SANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEAL------------CGK-KI 76
Query: 133 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 189
L++ P+ +L + + G NG QLG+GTT L P QV +V V CG
Sbjct: 77 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACG 136
Query: 190 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 249
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 137 SHHSMALAADGEVFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLH---IKRVVGI 186
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 187 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 251
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 205
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAA-CHSAHTSAAKTQGGHVYMW 310
Query: 206 GMEKG 210
G +G
Sbjct: 311 GQCRG 315
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/139 (31%), Positives = 63/139 (45%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G ++ WG NC G S + TP V + H
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHIK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHSV 233
Query: 118 SPWAVYEVTCGSFHTALLT 136
V ++ CG HT LT
Sbjct: 234 ---CVNQIVCGYAHTLALT 249
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 37/134 (27%), Positives = 60/134 (44%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+ ++ + G S+A+ + G ++ WG + G + + TP V H V
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWG---YNGNGQLGLGNNGNQLTPVRVAALHSVCVN 236
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ CG H +AL G + Y+WGAN GQLG G++ + L P I +
Sbjct: 237 QIVCGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE---- 284
Query: 121 AVYEVT-CGSFHTA 133
V E+ C S HT+
Sbjct: 285 RVIEIAACHSAHTS 298
Score = 106 (42.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 51/188 (27%), Positives = 79/188 (42%)
Query: 152 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 261
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 270
L + +SP I + + +++A C +AHT G ++ WG
Sbjct: 262 ----YGQLGTGNKNNLLSPAHIM------VEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 271 --RGRSGVLG----TGKTIDFFA----PAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
RG+S L T D FA PA+ W L+ E +D L + +K K+ +
Sbjct: 312 QCRGQSVTLPHLTHLSSTDDVFACFATPAVT-WRLLSVEH-EDFLTVA---ESLK-KEFD 365
Query: 321 GAEERDEK 328
E D K
Sbjct: 366 SPETADLK 373
Score = 97 (39.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
S +G + L+ ++ G ++ WG+ L + +T G + + T + VV+V
Sbjct: 80 SYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLI-----KQVVEV 133
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 109
ACGS H +AL + GE + +WG NN GQ+G G ++ P+
Sbjct: 134 ACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPR 172
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 47/129 (36%), Positives = 65/129 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D E R P ++ VY ++CG HTA+LT
Sbjct: 27 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 75
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 76 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 134
Query: 206 GM-EKG-LG 212
G KG LG
Sbjct: 135 GCGAKGQLG 143
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 141 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 200
P+ E + +G+ GQLG + P VK L + +V + CG HT+V++ +G
Sbjct: 18 PSQPAEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSG 76
Query: 201 DVWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLV 259
V+++G G C L + D ++P ++ G + Q+ACG HT+
Sbjct: 77 GVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAF 124
Query: 260 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++++G G G LGTG T + P+ V
Sbjct: 125 VPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 156
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/196 (30%), Positives = 98/196 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+ G+N+ QLG D ++ RP +I QD + + ++ CGS H+ L+ D +
Sbjct: 62 YACGSNDYSQLG-HDLPTK-RPLLIPEL-QD--YVIIQICCGSRHSLALS------DWGQ 110
Query: 147 SMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+ W G + GQLGH T + + +P+ V++L +V + CG H+ ++S G+++SW
Sbjct: 111 VLSW--GDNDCGQLGHATDKEIVQLPKVVRQLVTKT-VVQIACGNNHSLALTSCGELYSW 167
Query: 206 GME-KG-LGL-CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
G G LG+ PN LT ++ +L G +ACG H+ L++
Sbjct: 168 GSNIYGQLGVNSPN-DLTHCNYPLRLTTLL-------GIPL---AAIACGGNHSFLISKS 216
Query: 263 GYKLWSWGRGRSGVLG 278
G ++ WGR G LG
Sbjct: 217 G-AVFGWGRNNCGQLG 231
Score = 158 (60.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 51/149 (34%), Positives = 71/149 (47%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+ WG NN GQLGL D +R P ++T V V CG + LT+ E
Sbjct: 220 FGWGRNNCGQLGLNDETNRSYPTQLKTLRT---LGVRFVACGDEFSVFLTN--------E 268
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+T G G GQLGHG + + ++P V EL + V CG HT ++V S G V+++
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST-ITQVACGNRHTLALVPSRGRVYAF 327
Query: 206 GM-EKG-LGLCPNASLTRNEA--GDAISP 230
G+ G LG SL + G +SP
Sbjct: 328 GLGSSGQLGTRSTKSLMLPQVVIGPWVSP 356
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/130 (35%), Positives = 65/130 (50%)
Query: 81 GEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
G++L C WG+ ++GQLGLG + E L P I + D+ AV +V CG HT LT
Sbjct: 4 GKELYC--WGSTSHGQLGLGGIEDEQILTPSQIP-WTPDT--AVQQVACGHRHTLFLTAT 58
Query: 139 KRPNDMLESMCWTFGLGENGQLGHG--TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
+ + G + QLGH T + L+PE L YV ++ + CG H+ +
Sbjct: 59 GK--------VYACGSNDYSQLGHDLPTKRPLLIPE----LQDYV-IIQICCGSRHSLAL 105
Query: 197 SSAGDVWSWG 206
S G V SWG
Sbjct: 106 SDWGQVLSWG 115
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRL 106
P + + + ++++ CGS H +AL G+ SWG N+ GQLG D+E
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVL--------SWGDNDCGQLGHATDKEIVQ 132
Query: 107 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 166
PK++ + V ++ CG+ H+ LT ++ G+ L H
Sbjct: 133 LPKVVRQLVTKT---VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYP 189
Query: 167 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGL 213
L + +P L ++ CG H+ ++S +G V+ WG G LGL
Sbjct: 190 LRLTT--LLGIP----LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 53/180 (29%), Positives = 75/180 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN--CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
QIC G SLA+ + G + WG+ C +T+ +V P V TVV
Sbjct: 94 QIC---CGSRHSLALSDWGQVLSWGDNDCGQLGHATDK--EIVQ--LPKVVRQLVTKTVV 146
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR---PKIIETFNQD 117
++ACG+ H +AL S GE Y SWG+N GQLG+ P + T
Sbjct: 147 QIACGNNHSLALTSCGELY--------SWGSNIYGQLGVNSPNDLTHCNYPLRLTTL-LG 197
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
P A + CG H+ L++ + +G GQLG + P Q+K L
Sbjct: 198 IPLAA--IACGGNHSFLISK--------SGAVFGWGRNNCGQLGLNDETNRSYPTQLKTL 247
Score = 102 (41.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 207
FG G N GQLG + P Q+K L + + + V CG + +++ G V++ G
Sbjct: 220 FGWGRNNCGQLGLNDETNRSYPTQLKTL-RTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 208 --EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
+ G G N L R + ++ G QVACG HT+ + +
Sbjct: 279 YGQLGHGFSSNEMLPR-----MVMELM-------GSTI---TQVACGNRHTLALVPSRGR 323
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
++++G G SG LGT T P +V+ P
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 97 (39.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 23 LWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKG 81
L+ WG+ GG TPS + W V +VACG H + L + G+ Y
Sbjct: 7 LYCWGSTSHGQLGL-GGIEDEQILTPSQIPWT-PDTAVQQVACGHRHTLFLTATGKVY-- 62
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 136
C G+N+ QLG D ++ RP +I QD + + ++ CGS H+ L+
Sbjct: 63 ---AC---GSNDYSQLG-HDLPTK-RPLLIPEL-QD--YVIIQICCGSRHSLALS 106
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 173 (66.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 79 YKGEDLV-CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 137
+K DL Y+WG N N LG G ++S+ P++++ F ++S + V C FH+ L+H
Sbjct: 139 FKKTDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLC-KFHSVFLSH 197
Query: 138 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 197
+ +T G G+ G+LGHG Q+ LVP V+ L + + HT V++
Sbjct: 198 K--------GQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSH-QCSQIAAAKDHTVVLT 248
Query: 198 SAGDVWSWGMEK--GLGLCP---NASLTR 221
G V+++G+ LG+ P N S+ R
Sbjct: 249 EDGCVYTFGLNTFHQLGILPPPANCSVPR 277
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 290 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 322
I+ P T K D+ N+ E+ T D EG+
Sbjct: 1004 IIQSPASTGSIKLDKTNSVESLPELLTSDSEGS 1036
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 175 (66.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 77/262 (29%), Positives = 115/262 (43%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
VV V+CG H + L S YK +S G N GQLG+ + P ++T S
Sbjct: 76 VVSVSCGFNHTLLLTSE---YK-----IFSMGFNQTGQLGIENVVDSAVPLPVDTL---S 124
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG------------TTQ 166
+ V ++ G+ +A +T D+ CW G GQLG+G T
Sbjct: 125 KFNVIKIKAGNNVSAAITEA---GDLY---CW--GSSAYGQLGNGKMNAKLHSFTPTTIL 176
Query: 167 SALVPEQVKELPQYVYLVSVD-C-GLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLT 220
+ L+P+ K+ P Y L + C G HT +S+ G ++SWG + GLG C NA L
Sbjct: 177 NPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHC-NAKLV 235
Query: 221 ----------RNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
AG S +++ + + V +ACG H+ L+T +G L+ W
Sbjct: 236 PVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEG-DLFLW 294
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G + G LG G ++D P V
Sbjct: 295 GSNQYGQLGQGDSLDQSVPKTV 316
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 299 EFKQDELN----TGGLDDEIKTKDLEGAEERDEK 328
E +D LN T +DE D E EE DE+
Sbjct: 1182 EIAKDSLNYPHHTDDEEDEDDGDDEEEEEEEDEE 1215
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 111 (44.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHGT ++ P +V E Q + + V G +H+ VS GD++ WG E
Sbjct: 186 FSWGGGRHGQLGHGTLEAEREP-RVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNE 244
Query: 209 KGLGLCPNASLTRNE---AGDA 227
G P SL + GDA
Sbjct: 245 SGQLALPARSLAEDGKTITGDA 266
Score = 102 (41.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ G+EH + L +AG+ + SWG +GQLG G E+ P+++E Q P
Sbjct: 168 RLELGAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAEREPRVLEAL-QGLPM 218
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 160
A EV G +H+ ++ D+ W G E+GQL
Sbjct: 219 A--EVAAGGWHSVCVSET---GDIY---IW--GWNESGQL 248
Score = 90 (36.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P V
Sbjct: 303 PLGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHKDTTSLDRPCRV 352
Score = 75 (31.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 158 GQLGHGTTQSALVP-EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLC 214
G+ G T A+ P + +LP V CG HT+VV+ G++++WG K G LG
Sbjct: 282 GEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHK 341
Query: 215 PNASLTR 221
SL R
Sbjct: 342 DTTSLDR 348
Score = 73 (30.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/96 (27%), Positives = 40/96 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
++ G +L +D AG ++ WG G +L + P + G + +VA G
Sbjct: 169 LELGAEHALLLDAAGQVFSWGG---GRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGG 225
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
H V + G+ Y WG N +GQL L R
Sbjct: 226 WHSVCVSETGDIY--------IWGWNESGQLALPAR 253
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 90 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 149
G N +GQLGLG E LR I + P + +V CG T +LT + +L C
Sbjct: 74 GLNKDGQLGLGHTEEVLRFTICKPL-LGCP--IRQVACGWDFTIMLTEK---GQVLS--C 125
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 207
+ G+ G + HG + +VP+ ++ L + V V V GL H + G + WG
Sbjct: 126 GSNAFGQLG-VPHGP-RKCVVPQAIECLREKV--VCVAAGLRHALATTDTGSTFQWGTGL 181
Query: 208 -EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC---GAAHTVLVTDDG 263
G LCP +L P+ ++ P + V C G+ H+ +TD G
Sbjct: 182 ASSGRRLCPGQNL----------PLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTG 231
Query: 264 YKLWSWGRGRSGVLGT 279
+L+ WGR + G L +
Sbjct: 232 -ELYVWGRNKHGQLAS 246
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 85 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 144
V ++WGAN+ GQLGLG +E L P+ + F + + VT G H+ ++T +
Sbjct: 16 VLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSG--CIKSVTGGGGHSVVVTDG---GGL 70
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+C GL ++GQLG G T+ L K L + V CG T +++ G V S
Sbjct: 71 F--VC---GLNKDGQLGLGHTEEVLRFTICKPLLGCP-IRQVACGWDFTIMLTEKGQVLS 124
Query: 205 WG 206
G
Sbjct: 125 CG 126
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 107 (42.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 188 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 247
CG +V++ G V+ WG LG PN L + I P L G P+ +
Sbjct: 349 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LVETALPEMIPPTLF-GLTELNPEVRVS- 403
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
++ CG +H +TD G +L+ WG+ G LG G+ D + P V P
Sbjct: 404 RIRCGLSHFAALTDRG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 449
Score = 95 (38.5 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 48/179 (26%), Positives = 74/179 (41%)
Query: 40 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 99
+ L S P P+ V++V+CG H + L GE + +S G N+ GQ G
Sbjct: 163 YVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTD------GEGV--FSMGNNSYGQCGR 214
Query: 100 GDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 158
E+ + + + QD V +V CG H+ LT + ++ G G +G
Sbjct: 215 KVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGE--------VYSCGWGADG 266
Query: 159 QLGHGTTQSALVPEQVKELPQYVYLVSV----DCGLFHTSVVSSAGDVWSWGMEKGLGL 213
Q G G P ++ V +V V DC L VS+ G ++ WG + L L
Sbjct: 267 QTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCCL----AVSADGSLFGWGNSEYLQL 321
Score = 93 (37.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS--FTPSP----VWDFH 55
+Q+ V G SL + + ++ GN +S + G +V + ++ S + DF
Sbjct: 180 TQVLQVSCGRAHSLVLTDGEGVFSMGN----NSYGQCGRKVVENEIYSESHKVHRMQDFD 235
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 100
G VV+VACG +H + L GE Y C WGA+ GQ GLG
Sbjct: 236 GQ-VVQVACGQDHSLFLTDKGEVYS-----C-GWGAD--GQTGLG 271
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
SA T +G VC G N +GQLGLG E L + ++ P + +V CG T
Sbjct: 61 SAIVTDQGSLFVC---GLNKDGQLGLGHTEDVLYFTLCKSL-LGCP--IQQVACGWDFTI 114
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLF 191
+LT N + S C G GQLG HG + +VP+ ++ + V VS+ GL
Sbjct: 115 ILTK----NGQVLS-C---GSNSFGQLGVPHGPRR-CVVPQAIEVQREKV--VSIAAGLR 163
Query: 192 HTSVVSSAGDVWSWGM---EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 248
H +++G V+ WG G LCP +L S + + G + V
Sbjct: 164 HALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTV------GLENSQAVC 217
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
V G+ H+ +TD G +L+ WG + G L +
Sbjct: 218 VLAGSGHSASLTDAG-ELYVWGSNKHGQLAS 247
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
++WGAN+ GQLGLG +E L P+ + F + P V +T G H+A++T + +
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLSEFCK--PGCVKRITGGGGHSAIVTDQ---GSLF- 71
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+C GL ++GQLG G T+ L K L + V CG T +++ G V S G
Sbjct: 72 -VC---GLNKDGQLGLGHTEDVLYFTLCKSLLGCP-IQQVACGWDFTIILTKNGQVLSCG 126
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 114 (45.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHGT ++ P ++ L Q + + V G +H+ +S GD++ WG E
Sbjct: 181 FSWGAGRHGQLGHGTLEAEPEPRLLEAL-QGLRMAEVAAGGWHSVCLSETGDIYIWGWNE 239
Query: 209 KGLGLCPNASLT---RNEAGDA 227
G P SL + AG+A
Sbjct: 240 SGQLALPTKSLAEDGKTTAGEA 261
Score = 106 (42.4 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G VKV+CGS H L GE Y +WG GQLG D + RP +E F
Sbjct: 300 GSEAVKVSCGSRHTAVLTRTGELY--------TWGWGKYGQLGHKDTTTLDRPCRVEYF- 350
Query: 116 QDSPWAVYEVTCGSFHT 132
D V V+CG ++T
Sbjct: 351 VDKQLQVRTVSCGPWNT 367
Score = 99 (39.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ G+EH + L +AG+ + SWGA +GQLG G E+ P+++E Q
Sbjct: 163 RLELGAEHALLLDAAGQVF--------SWGAGRHGQLGHGTLEAEPEPRLLEAL-QGLRM 213
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 168
A EV G +H+ L+ D+ W G E+GQL T A
Sbjct: 214 A--EVAAGGWHSVCLSET---GDIY---IW--GWNESGQLALPTKSLA 251
Score = 89 (36.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVY 182
+V+CGS HTA+LT R ++ +T+G G+ GQLGH T + P +V+ + + +
Sbjct: 305 KVSCGSRHTAVLT---RTGEL-----YTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQ 356
Query: 183 LVSVDCGLFHTSV 195
+ +V CG ++T V
Sbjct: 357 VRTVSCGPWNTYV 369
Score = 84 (34.6 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ V+V+CG+ HT ++T G +L++WG G+ G LG T P V
Sbjct: 302 EAVKVSCGSRHTAVLTRTG-ELYTWGWGKYGQLGHKDTTTLDRPCRV 347
Score = 72 (30.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 26/93 (27%), Positives = 39/93 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
++ G +L +D AG ++ WG G +L + P + G + +VA G
Sbjct: 164 LELGAEHALLLDAAGQVFSWG---AGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGG 220
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 99
H V L G+ Y WG N +GQL L
Sbjct: 221 WHSVCLSETGDIY--------IWGWNESGQLAL 245
Score = 68 (29.0 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEK 209
V V CG HT+V++ G++++WG K
Sbjct: 304 VKVSCGSRHTAVLTRTGELYTWGWGK 329
Score = 51 (23.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWG 27
++ V AGG S+ + G +++WG
Sbjct: 212 RMAEVAAGGWHSVCLSETGDIYIWG 236
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 111 (44.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHG+ ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 183 FSWGGGRHGQLGHGSLEAELEPRLLEAL-QGLRMAEVAAGGWHSVCVSETGDIYIWGWNE 241
Query: 209 KGLGLCPNASLTRNE 223
G P S T +
Sbjct: 242 SGQLALPTRSGTEKK 256
Score = 109 (43.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V ++ G+EH + L AG+ + SWG +GQLG G E+ L P+++E Q
Sbjct: 163 VRQLQLGAEHALLLCEAGQVF--------SWGGGRHGQLGHGSLEAELEPRLLEAL-QGL 213
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQSALVPEQVK 175
A EV G +H+ ++ D+ W G E+GQL T T+ V E+
Sbjct: 214 RMA--EVAAGGWHSVCVSET---GDIY---IW--GWNESGQLALPTRSGTEKKTVREEAT 263
Query: 176 EL 177
EL
Sbjct: 264 EL 265
Score = 87 (35.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
P D V+ +CG+ HT +VT G +L++WG G+ G LG
Sbjct: 299 PLGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLG 335
Score = 69 (29.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+LP V CG HT+VV+ G++++WG K
Sbjct: 297 DLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGK 330
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 112 (44.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 34/107 (31%), Positives = 51/107 (47%)
Query: 188 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 247
CG +V++ G V+ WG LG PN L + + I P L G P+ Q
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LVESAVPEMIPPTLF-GLTEFNPEIQVS- 397
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
++ CG +H +T+ G +L+ WG+ G LG G+ D + P V P
Sbjct: 398 RIRCGLSHFAALTNKG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 443
Score = 88 (36.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 23/48 (47%), Positives = 27/48 (56%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 100
DF G VV+VACG +H + L GE Y C WGA+ GQ GLG
Sbjct: 227 DFDGQ-VVQVACGQDHSLFLTDKGEVYS-----C-GWGAD--GQTGLG 265
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 123 (48.4 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+SWG +GQLG GD RL+P +++ N V +V G+ H+ LT +
Sbjct: 552 WSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKE---VLKVAAGAHHSLALT--------AQ 600
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
S +++G +GQLGH +S Q+ +L + + + GL HT +++ GD
Sbjct: 601 SQVFSWGCNTSGQLGH--MESPTTFPQLTKLSDGIRVWDIGAGLQHTLLLAD-GD 652
Score = 114 (45.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 38/120 (31%), Positives = 55/120 (45%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L++ W++G G++GQLGHG L P+ VK L L V G H+ +++ V+S
Sbjct: 547 LQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVL-KVAAGAHHSLALTAQSQVFS 605
Query: 205 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV---ACGAAHTVLVTD 261
WG C N S + G SP P K D ++V G HT+L+ D
Sbjct: 606 WG-------C-NTS---GQLGHMESPTTF----PQLTKLSDGIRVWDIGAGLQHTLLLAD 650
Score = 89 (36.4 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLP-DSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
+I V G +LA+ +W WG+ C L ++ST F + + P V G V+
Sbjct: 146 KILEVACGDQHTLALSAKHEVWAWGSGCQLGLNTST---FPV---WKPQKVDHLSGRHVL 199
Query: 61 KVACGSEHVVALV 73
+VACGS H VALV
Sbjct: 200 QVACGSAHSVALV 212
Score = 89 (36.4 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG---HTV 59
++ V AG S + G + MWG + G S++ + TP V D TV
Sbjct: 87 RVVFVAAGSAHSGVVTEDGGVHMWGE-NVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTV 145
Query: 60 --VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 116
++VACG +H +AL + E + +WG+ QLGL + +P+ ++
Sbjct: 146 KILEVACGDQHTLALSAKHEVW--------AWGSGC--QLGLNTSTFPVWKPQKVDHL-- 193
Query: 117 DSPWAVYEVTCGSFHTALL 135
S V +V CGS H+ L
Sbjct: 194 -SGRHVLQVACGSAHSVAL 211
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 78/280 (27%), Positives = 114/280 (40%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G + + + + G + +G+ + G SL P+ V G+ +V+VACG+
Sbjct: 387 VACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 443
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
HV+AL + E + +WG + G+LGLG RES P+++ V
Sbjct: 444 SHVLALSTERELF--------AWGRGDGGRLGLGTRESHCCPQLVP---MPPGQEAQRVV 492
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALVPEQVKELP------ 178
CG + +LT P L F LG + LG V E V P
Sbjct: 493 CGIDSSMILTV---PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPL 549
Query: 179 QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 237
L+SVD G H++ V+ A GD +++G NA +P + G
Sbjct: 550 DQEPLLSVDLGTAHSAAVTXASGDCYTFGS--------NARRVSR------APCRVQGL- 594
Query: 238 PHGPKFQDPVQVACGAAHTVLVTDDGYKL-WSWG-RGRSG 275
G K VACG A TV + +G W G RGR G
Sbjct: 595 -QGIKIST---VACGDAFTVAIGAEGEVFSWGKGARGRLG 630
Score = 129 (50.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 37/110 (33%), Positives = 52/110 (47%)
Query: 107 RPKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 165
+P+ + F + S + V CG TA LT R + TFG G NG LGHG+
Sbjct: 368 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDR--------GIIMTFGSGSNGCLGHGSL 419
Query: 166 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGL 213
P V+ L Y +V V CG H +S+ ++++WG G LGL
Sbjct: 420 NDISQPTIVEALLGYE-MVQVACGASHVLALSTERELFAWGRGDGGRLGL 468
Score = 73 (30.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
VACG A TV + +G +++SWG+G G LG
Sbjct: 602 VACGDAFTVAIGAEG-EVFSWGKGARGRLG 630
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 78/280 (27%), Positives = 114/280 (40%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G + + + + G + +G+ + G SL P+ V G+ +V+VACG+
Sbjct: 391 VACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 447
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
HV+AL + E + +WG + G+LGLG RES P+++ V
Sbjct: 448 SHVLALSTERELF--------AWGRGDGGRLGLGTRESHCCPQLVP---MPPGQEAQRVV 496
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALVPEQVKELP------ 178
CG + +LT P L F LG + LG V E V P
Sbjct: 497 CGIDSSMILTV---PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPL 553
Query: 179 QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 237
L+SVD G H++ V+ A GD +++G NA +P + G
Sbjct: 554 DQEPLLSVDLGTAHSAAVTXASGDCYTFGS--------NARRVSR------APCRVQGL- 598
Query: 238 PHGPKFQDPVQVACGAAHTVLVTDDGYKL-WSWG-RGRSG 275
G K VACG A TV + +G W G RGR G
Sbjct: 599 -QGIKIST---VACGDAFTVAIGAEGEVFSWGKGARGRLG 634
Score = 129 (50.5 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 37/110 (33%), Positives = 52/110 (47%)
Query: 107 RPKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 165
+P+ + F + S + V CG TA LT R + TFG G NG LGHG+
Sbjct: 372 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDR--------GIIMTFGSGSNGCLGHGSL 423
Query: 166 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGL 213
P V+ L Y +V V CG H +S+ ++++WG G LGL
Sbjct: 424 NDISQPTIVEALLGYE-MVQVACGASHVLALSTERELFAWGRGDGGRLGL 472
Score = 73 (30.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
VACG A TV + +G +++SWG+G G LG
Sbjct: 606 VACGDAFTVAIGAEG-EVFSWGKGARGRLG 634
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 132 (51.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
+++SV G +H S V+ G V WG E G C ++ + + +P+ + + H P
Sbjct: 81 HVISVSAGSYHCSAVTEDGLVLMWG-ENSYGQC---GVSGTDRVPSPTPVTVVDDETHPP 136
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 272
+ + VACGA HT+ +++ +++W+WG G
Sbjct: 137 QLVRVLNVACGAQHTLALSNK-HEVWAWGSG 166
Score = 111 (44.1 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
W++G G GQLGHG L P +K L + +V + G H+ +++ V+SWG EK
Sbjct: 523 WSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKE-VVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-DGYK 265
G L R + + P L + + G + D VA G HT+L+ D D Y+
Sbjct: 582 -FG-----QLGRMNSPSTV-PNLTTVSD--GIRVWD---VAAGQTHTLLLADGDCYQ 626
Score = 108 (43.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 51/168 (30%), Positives = 73/168 (43%)
Query: 37 EGGFSLVSSF--TP-SPVWDFHGHTVVKVACGSEHVVALVSAGETYKG---EDLVCYSWG 90
EGG V SF P PV V++ +HV++ VSAG + ED + WG
Sbjct: 49 EGG--QVYSFGEQPWKPVEPPPASLVLESTLSGQHVIS-VSAGSYHCSAVTEDGLVLMWG 105
Query: 91 ANNNGQLGLG--DRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLE 146
N+ GQ G+ DR P + P V V CG+ HT L+++
Sbjct: 106 ENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNKHE------ 159
Query: 147 SMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHT 193
W +G G QLG T + P++V+ L Y+V + CG FH+
Sbjct: 160 --VWAWGSG--CQLGLVTNVFPVWKPQKVEHLVGR-YVVQIACGAFHS 202
Score = 100 (40.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 40/138 (28%), Positives = 61/138 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT----- 58
+ SV AG A+ G + MWG G V S TP V D H
Sbjct: 82 VISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGT-DRVPSPTPVTVVDDETHPPQLVR 140
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQD 117
V+ VACG++H +AL + E + +WG+ QLGL + +P+ +E +
Sbjct: 141 VLNVACGAQHTLALSNKHEVW--------AWGSGC--QLGLVTNVFPVWKPQKVE--HLV 188
Query: 118 SPWAVYEVTCGSFHTALL 135
+ V ++ CG+FH+ L
Sbjct: 189 GRYVV-QIACGAFHSLAL 205
Score = 99 (39.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+SWG + GQLG GD RL+P I++ ++ V ++T G+ H+ LT +
Sbjct: 523 WSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKE---VVKITAGANHSLALT--------AQ 571
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 203
+++G + GQLG + S VP + + + + V G HT +++ GD +
Sbjct: 572 CQVYSWGSEKFGQLGRMNSPST-VPN-LTTVSDGIRVWDVAAGQTHTLLLAD-GDCY 625
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++ +V G +LA+ N +W WG+ C L F + + P V G VV+
Sbjct: 140 RVLNVACGAQHTLALSNKHEVWAWGSGCQL--GLVTNVFPV---WKPQKVEHLVGRYVVQ 194
Query: 62 VACGSEHVVALV 73
+ACG+ H +ALV
Sbjct: 195 IACGAFHSLALV 206
Score = 65 (27.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 201 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+VWSWG KG L + + P+ I ++ V++ GA H++ +T
Sbjct: 521 EVWSWG--KG----HEGQLGHGDYLPRLQPLCIKSLSK-----KEVVKITAGANHSLALT 569
Query: 261 DDGYKLWSWGRGRSGVLG 278
+++SWG + G LG
Sbjct: 570 AQ-CQVYSWGSEKFGQLG 586
Score = 62 (26.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++WSWG+G G LG G + P +
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCI 547
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 140 (54.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 58/219 (26%), Positives = 92/219 (42%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S I + G L+ +G G SL+ TP V GH ++ +
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL-GEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFN-----Q 116
+ G H + L T KG LV +S+G N+ GQLG+G ++ PK I+ F Q
Sbjct: 398 SSGGGHSLVL-----TNKG--LV-FSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQ 449
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-----HGTTQSALVP 171
P + +V+ G +H+ ++ ND + W G + G LG G ++
Sbjct: 450 QQPINIIKVSAGGYHSIAISDN---ND---TYAW--GRSDYGVLGTSIDVQGDRNLPVLI 501
Query: 172 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 210
+ V + V G H +S G ++SWG G
Sbjct: 502 NSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAG 540
Score = 125 (49.1 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 43/165 (26%), Positives = 85/165 (51%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV---PEQVKELP 178
+ +++CG+ +A++T + + +TFG G++G+LG G QS L+ P+ V+ L
Sbjct: 340 IVKLSCGTNRSAVITDK--------GLLFTFGRGDHGRLGLGE-QSLLMQSTPKLVQSLQ 390
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 234
+ +++ + G H+ V+++ G V+S+G + G+G N + I S
Sbjct: 391 GH-FIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQ----IQWFQTS 445
Query: 235 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
P + ++V+ G H++ ++D+ ++WGR GVLGT
Sbjct: 446 QQQQQQPI--NIIKVSAGGYHSIAISDNN-DTYAWGRSDYGVLGT 487
Score = 84 (34.6 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT---V 59
+I + G + S I + G L+ +G+ L G +L S +P V F V
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLL---GKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 104
V +A G +H +AL G+ Y SWG N++ QLGLG+ S
Sbjct: 246 VSIANGGKHSLALTICGKVY--------SWGGNDSCQLGLGNGSS 282
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 66 SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
++ + L+S G + + Y++G G+LG G+ ES PK++E F V
Sbjct: 186 NQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 123 YEVTCGSFHTALLT 136
+ G H+ LT
Sbjct: 246 VSIANGGKHSLALT 259
Score = 47 (21.6 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 17/88 (19%), Positives = 37/88 (42%)
Query: 303 DELNTGGLDDEIKTKDLEGAEER--DEKLSSAMEEMKLLQSKLSVMERYASILHGSI--F 358
+ +N+ ++D + E+ +E + +E KLL ++ + E IL + F
Sbjct: 1070 NNINSNSINDSSNNNNNNNNIEKLKNELIKLKKDEQKLLSNQQEINELIIEILDKYVPEF 1129
Query: 359 GKPFAAEQDIPISLKDMGFFDITKEWEN 386
A I +KD G +++++
Sbjct: 1130 KIKLRANDKISSRIKDTGLLVTDRKFQH 1157
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 106 (42.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G VVK +CGS H + GE Y +WG GQLG D S RP +E F
Sbjct: 236 GADVVKASCGSRHTAVVTGTGELY--------TWGWGKYGQLGHKDTTSLDRPCRVEYF- 286
Query: 116 QDSPWAVYEVTCGSFHT 132
D V V+CG ++T
Sbjct: 287 VDKQLQVRAVSCGPWNT 303
Score = 103 (41.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ G+EH + L AG+ + SWG +GQLG G E+ P+++E Q P
Sbjct: 99 RLELGAEHALLLDEAGQVF--------SWGQGRHGQLGHGSLEAEPEPRLLEAL-QGLP- 148
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V EV G +H+ ++ D+ W G E+GQL S + E K +P+
Sbjct: 149 -VAEVAAGGWHSVCVSET---GDIY---IW--GWNESGQLA---LPSRSLAEDTKTIPR 195
Score = 89 (36.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P V
Sbjct: 234 PLGADVVKASCGSRHTAVVTGTG-ELYTWGWGKYGQLGHKDTTSLDRPCRV 283
Score = 84 (34.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/115 (26%), Positives = 48/115 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
++ G +L +D AG ++ WG G SL + P + G V +VA G
Sbjct: 100 LELGAEHALLLDEAGQVFSWGQ---GRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGG 156
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR----ESRLRPKIIETFNQD 117
H V + G+ Y WG N +GQL L R +++ P+ N+D
Sbjct: 157 WHSVCVSETGDIY--------IWGWNESGQLALPSRSLAEDTKTIPREASGLNED 203
Score = 81 (33.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQY 180
V + +CGS HTA++T +T+G G+ GQLGH T S P +V+ + +
Sbjct: 239 VVKASCGSRHTAVVTGTGE--------LYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQ 290
Query: 181 VYLVSVDCGLFHTSV 195
+ + +V CG ++T V
Sbjct: 291 LQVRAVSCGPWNTYV 305
Score = 77 (32.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 221
+LP +V CG HT+VV+ G++++WG K G LG SL R
Sbjct: 232 DLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDR 279
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWG 27
+ V AGG S+ + G +++WG
Sbjct: 149 VAEVAAGGWHSVCVSETGDIYIWG 172
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 62/204 (30%), Positives = 90/204 (44%)
Query: 31 LPDSSTEGGFS-LVSS--FTPSPV-----WDFHGHTVVKVACGSEHVVALVSAGETYK-G 81
+ + T GG S L SS P P+ W T +++ + V+ VS G T K G
Sbjct: 296 ITSTRTRGGLSSLTSSKMMHPLPLFSVYTWGSGISTPLRLPMLNTEVIQ-VSLGRTQKMG 354
Query: 82 ED----LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ-DSPWAVYEVTCGSFHTALLT 136
L+ + + +G+ L +++P+ I F + S + V+CG T LT
Sbjct: 355 VTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLT 414
Query: 137 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 196
R + TFG G NG LGHG P+ V+ L Y LV V CG H V
Sbjct: 415 DR--------GIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYE-LVQVSCGASHVLAV 465
Query: 197 SSAGDVWSWGM-EKG-LGLCPNAS 218
++ +V+SWG + G LGL S
Sbjct: 466 TNEREVFSWGRGDNGRLGLATQDS 489
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 63/206 (30%), Positives = 93/206 (45%)
Query: 87 YSWGANNNGQLGLGDR--ESRLRPKI--IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 142
+S G N GQLG ++L+ +I +ET + D V+CG H+ + H+ R
Sbjct: 45 HSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDL------VSCGKEHSLAVCHKGRV- 97
Query: 143 DMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
W G G GQLG G ++ L+P ++K L + + V CG +H+ +S G
Sbjct: 98 -----FAW--GAGSEGQLGTGEFKETNLIPMKIKTLND-IKIKQVSCGHYHSLALSEGGQ 149
Query: 202 VWSWGMEK----GLGL-CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 255
V+SWG GLG P+ AS R + D I P+ QVA G AH
Sbjct: 150 VFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PL---------------AQVAAGGAH 193
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ ++ G + WGR +G L K
Sbjct: 194 SFALSLSGTS-FGWGRNNAGQLALHK 218
Score = 149 (57.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 58/199 (29%), Positives = 83/199 (41%)
Query: 34 SSTEGGFSLVSSF----TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 89
S+++G L F +P V G + +VA G H AL +G ++ W
Sbjct: 155 SNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSF--------GW 206
Query: 90 GANNNGQLGLGDRE---SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
G NN GQL L +P I +Y ++CG HT +LT +
Sbjct: 207 GRNNAGQLALHKNNVSGQSYKPYSISALKNLG--VIY-ISCGYEHTVVLTQNGK------ 257
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 205
+TFG GQLGH T P+ V+ + V +DCG +HT + V + G V S+
Sbjct: 258 --VFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS--QIDCGSYHTLAYVYTTGKVVSF 313
Query: 206 GMEKGLGLCPN--ASLTRN 222
G E P +LT N
Sbjct: 314 GREPTCKSSPTHPEALTEN 332
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/214 (26%), Positives = 95/214 (44%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G SLA+ + G ++ WG T G F ++ P + + + +V+CG
Sbjct: 81 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGT-GEFK-ETNLIPMKIKTLNDIKIKQVSCGH 138
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAVYEV 125
H +AL G+ + SWG+N++GQLGLG + S+ P+ + + + P A +V
Sbjct: 139 YHSLALSEGGQVF--------SWGSNSDGQLGLGKKFPSQASPQRVRSLD-GIPLA--QV 187
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
G H+ L+ + L +N G QS P + L + ++
Sbjct: 188 AAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSG----QS-YKPYSISALKN-LGVIY 241
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNA 217
+ CG HT V++ G V+++G G LG P A
Sbjct: 242 ISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTA 275
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 180
+ +V+CG +H+ L+ +++G +GQLG G S P++V+ L
Sbjct: 131 IKQVSCGHYHSLALSEG--------GQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDG- 181
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
+ L V G H+ +S +G + WG L + + N +G + P IS G
Sbjct: 182 IPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN---NVSGQSYKPYSISALKNLG 238
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ ++CG HTV++T +G K++++G G LG T + P +V
Sbjct: 239 V-----IYISCGYEHTVVLTQNG-KVFTFGDNTYGQLGHSPTAEKSGPQLV 283
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
++ I V +G +A+D G +++WG +G P PV G +V
Sbjct: 144 INDIVQVASGSNHCIALDEGGRVFVWGE------QADGR----CIHRPEPVEQLSGVPIV 193
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSP 119
+V G+ H +AL ++G + +WG NN+G+LG+ D LRP+ ++ +Q
Sbjct: 194 RVLAGARHCLALSASGAVF--------TWGQNNSGELGIDD----LRPQTSVQHVHQMDG 241
Query: 120 WAVYEVTCGSFHTALLTH 137
V E CG HT LLTH
Sbjct: 242 LGVVEAACGDNHTVLLTH 259
Score = 139 (54.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 55/190 (28%), Positives = 78/190 (41%)
Query: 90 GANNNGQLGLGDRESRLR-P-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 147
G GQLG+ ES ++ P +II N AV VTCG HT LT +
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTK--------DG 60
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
W+ G +GQLG G+ ++ + G HT V+ G V++WG
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 208 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
E G LG+ E S G + D VQVA G+ H + + D+G +
Sbjct: 121 NEHGQLGM---------E-----SKFTWQGTPRRVQEINDIVQVASGSNHCIAL-DEGGR 165
Query: 266 LWSWGRGRSG 275
++ WG G
Sbjct: 166 VFVWGEQADG 175
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 155 GENGQLGHGTTQSAL-VPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKG 210
GE GQLG ++S + VPE++ P + + SV CG HT ++ G +WS G
Sbjct: 12 GE-GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD 70
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
G S R E +I P+ + + K +Q++ G +HTV VTDDG ++++WG
Sbjct: 71 -GQLGRGS--RTEGSFSIYPVSWTSSA----KI---IQISAGRSHTVSVTDDG-RVFAWG 119
Query: 271 RGRSGVLG 278
G LG
Sbjct: 120 SNEHGQLG 127
Score = 93 (37.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 171 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAIS 229
PE V++L V +V V G H +S++G V++WG N S E G D +
Sbjct: 181 PEPVEQLSG-VPIVRVLAGARHCLALSASGAVFTWGQ--------NNS---GELGIDDLR 228
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
P S H V+ ACG HTVL+T G + +S+G G G GK ++
Sbjct: 229 P-QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG-RTFSFGSDALGQCGFGKKVE 281
Score = 91 (37.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 62
+ SV G ++ + G +W G+ D G SF+ PV W ++++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNM--DGQLGRGSRTEGSFSIYPVSWTSSAK-IIQI 99
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPWA 121
+ G H V++ G + +WG+N +GQLG+ + + + P+ ++ N
Sbjct: 100 SAGRSHTVSVTDDGRVF--------AWGSNEHGQLGMESKFTWQGTPRRVQEIND----- 146
Query: 122 VYEVTCGSFHTALL 135
+ +V GS H L
Sbjct: 147 IVQVASGSNHCIAL 160
Score = 91 (37.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G +G+LG + + V ++ + +V CG HT +++ G +S+G +
Sbjct: 212 FTWGQNNSGELGIDDLRPQTSVQHVHQMDG-LGVVEAACGDNHTVLLTHCGRTFSFGSD- 269
Query: 210 GLGLCP-NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
LG C + + A+S ++ G H ++A GA HT+ + +
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLI----GSH------VTRIAAGACHTIAICKGAP--YP 317
Query: 269 WGRGRSGVLGTGKTIDFFAP 288
+G SG LG GK + P
Sbjct: 318 FGLNSSGQLGNGKIMTQSTP 337
Score = 80 (33.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKII 111
D G V V CG +H V L G+ + S G+N +GQLG G R E I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMW--------SVGSNMDGQLGRGSRTEGSFS---I 85
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLT 136
+ S + +++ G HT +T
Sbjct: 86 YPVSWTSSAKIIQISAGRSHTVSVT 110
Score = 75 (31.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++I + AG ++++ + G ++ WG+ E F+ TP V + + +V+
Sbjct: 94 AKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQG--TPRRVQEIND--IVQ 149
Query: 62 VACGSEHVVALVSAGETY 79
VA GS H +AL G +
Sbjct: 150 VASGSNHCIALDEGGRVF 167
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 154 (59.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
++ I V +G +A+D G +++WG +G P PV G +V
Sbjct: 144 INDIVQVASGSNHCIALDEGGRVFVWGE------QADGR----CIHRPEPVEQLSGVPIV 193
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSP 119
+V G+ H +AL ++G + +WG NN+G+LG+ D LRP+ ++ +Q
Sbjct: 194 RVLAGARHCLALSASGAVF--------TWGQNNSGELGIDD----LRPQTSVQHVHQMDG 241
Query: 120 WAVYEVTCGSFHTALLTH 137
V E CG HT LLTH
Sbjct: 242 LGVVEAACGDNHTVLLTH 259
Score = 139 (54.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 55/190 (28%), Positives = 78/190 (41%)
Query: 90 GANNNGQLGLGDRESRLR-P-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 147
G GQLG+ ES ++ P +II N AV VTCG HT LT +
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTK--------DG 60
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
W+ G +GQLG G+ ++ + G HT V+ G V++WG
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 208 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
E G LG+ E S G + D VQVA G+ H + + D+G +
Sbjct: 121 NEHGQLGM---------E-----SKFTWQGTPRRVQEINDIVQVASGSNHCIAL-DEGGR 165
Query: 266 LWSWGRGRSG 275
++ WG G
Sbjct: 166 VFVWGEQADG 175
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 155 GENGQLGHGTTQSAL-VPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKG 210
GE GQLG ++S + VPE++ P + + SV CG HT ++ G +WS G
Sbjct: 12 GE-GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD 70
Query: 211 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
G S R E +I P+ + + K +Q++ G +HTV VTDDG ++++WG
Sbjct: 71 -GQLGRGS--RTEGSFSIYPVSWTSSA----KI---IQISAGRSHTVSVTDDG-RVFAWG 119
Query: 271 RGRSGVLG 278
G LG
Sbjct: 120 SNEHGQLG 127
Score = 93 (37.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 171 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAIS 229
PE V++L V +V V G H +S++G V++WG N S E G D +
Sbjct: 181 PEPVEQLSG-VPIVRVLAGARHCLALSASGAVFTWGQ--------NNS---GELGIDDLR 228
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
P S H V+ ACG HTVL+T G + +S+G G G GK ++
Sbjct: 229 P-QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG-RTFSFGSDALGQCGFGKKVE 281
Score = 91 (37.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 62
+ SV G ++ + G +W G+ D G SF+ PV W ++++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNM--DGQLGRGSRTEGSFSIYPVSWTSSAK-IIQI 99
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPWA 121
+ G H V++ G + +WG+N +GQLG+ + + + P+ ++ N
Sbjct: 100 SAGRSHTVSVTDDGRVF--------AWGSNEHGQLGMESKFTWQGTPRRVQEIND----- 146
Query: 122 VYEVTCGSFHTALL 135
+ +V GS H L
Sbjct: 147 IVQVASGSNHCIAL 160
Score = 91 (37.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+T+G +G+LG + + V ++ + +V CG HT +++ G +S+G +
Sbjct: 212 FTWGQNNSGELGIDDLRPQTSVQHVHQMDG-LGVVEAACGDNHTVLLTHCGRTFSFGSD- 269
Query: 210 GLGLCP-NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
LG C + + A+S ++ G H ++A GA HT+ + +
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLI----GSH------VTRIAAGACHTIAICKGAP--YP 317
Query: 269 WGRGRSGVLGTGKTIDFFAP 288
+G SG LG GK + P
Sbjct: 318 FGLNSSGQLGNGKIMTQSTP 337
Score = 80 (33.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 53 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKII 111
D G V V CG +H V L G+ + S G+N +GQLG G R E I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMW--------SVGSNMDGQLGRGSRTEGSFS---I 85
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLT 136
+ S + +++ G HT +T
Sbjct: 86 YPVSWTSSAKIIQISAGRSHTVSVT 110
Score = 75 (31.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++I + AG ++++ + G ++ WG+ E F+ TP V + + +V+
Sbjct: 94 AKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQG--TPRRVQEIND--IVQ 149
Query: 62 VACGSEHVVALVSAGETY 79
VA GS H +AL G +
Sbjct: 150 VASGSNHCIALDEGGRVF 167
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 106 (42.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 188 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 247
CG +V++ G V+ WG LG PN L + I P L G P Q
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LLETALPEMIPPTLF-GLSEFNPGVQVS- 397
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
++ CG +H +T+ G +L+ WG+ G LG G+ D + P V P
Sbjct: 398 RIRCGLSHFAALTNRG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 443
Score = 89 (36.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS--FTPSP----VWDFH 55
+++ V G SL + + ++ GN +S + G +V + ++ S + DF
Sbjct: 174 TRVLQVSCGRAHSLVLTDGEGVFSMGN----NSYGQCGRKVVENEIYSESHRVHRMQDFD 229
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 100
G VV+VACG +H + L GE Y C WGA+ GQ GLG
Sbjct: 230 GQ-VVQVACGQDHSLFLTDQGEVYS-----C-GWGAD--GQTGLG 265
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 107 (42.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 157 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLC 214
+GQLGHG+ +S P V+ L V + +V G +H++ VS GD++ WG E G LGL
Sbjct: 10 HGQLGHGSLESEQQPRLVEALGG-VPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL- 67
Query: 215 PNASLTRNEAGDAISPILISGNGPHGP 241
P+ ++ +A D G GP P
Sbjct: 68 PSRAVAEEQAEDEDM-----GAGPEDP 89
Score = 99 (39.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 28/74 (37%), Positives = 35/74 (47%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V V+CGS H AL GE +WG GQLG GDR S P+ +E +
Sbjct: 118 VAAVSCGSRHTAALTRGGELN--------TWGWGKYGQLGHGDRASCDHPRRVEQLWAEG 169
Query: 119 PWAVYEVTCGSFHT 132
A EV CG ++T
Sbjct: 170 LRA-QEVVCGPWNT 182
Score = 97 (39.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQ 179
AV V+CGS HTA LT N T+G G+ GQLGHG S P +V++L +
Sbjct: 117 AVAAVSCGSRHTAALTRGGELN--------TWGWGKYGQLGHGDRASCDHPRRVEQLWAE 168
Query: 180 YVYLVSVDCGLFHTSV 195
+ V CG ++T V
Sbjct: 169 GLRAQEVVCGPWNTYV 184
Score = 75 (31.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 249 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV--LWPPLTEEFKQDELN 306
V+CG+ HT +T G +L +WG G+ G LG G P V LW E + E+
Sbjct: 121 VSCGSRHTAALTRGG-ELNTWGWGKYGQLGHGDRASCDHPRRVEQLW---AEGLRAQEVV 176
Query: 307 TGGLDDEIKTKDLEGAEERDEKLSS 331
G + + L+ E RD S
Sbjct: 177 CGPWNTYVCV--LQQGEARDSHAPS 199
Score = 64 (27.6 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 28/65 (43%), Positives = 30/65 (46%)
Query: 38 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 97
G SL S P V G + VA G H A VS G G DL Y WG N +GQL
Sbjct: 14 GHGSLESEQQPRLVEALGGVPMRAVAAGGWHS-ACVSDG----G-DL--YVWGWNESGQL 65
Query: 98 GLGDR 102
GL R
Sbjct: 66 GLPSR 70
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 6 SVKAGGMMSLAIDNAGALWMWG 27
+V AGG S + + G L++WG
Sbjct: 37 AVAAGGWHSACVSDGGDLYVWG 58
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLC-KFHSVFLSQ--------Q 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHS-CSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 MEK--GLGLCPNAS 218
+ LG+ P S
Sbjct: 255 LNTFHQLGIIPPPS 268
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 152 (58.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 60/199 (30%), Positives = 87/199 (43%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WG L ST + V + P V F ACG H + G+ Y
Sbjct: 64 WGQLGLGSKSTVSKPTCVKALKPEKV-KF-------AACGRNHTLVSTEGGKVYAA---- 111
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
G NN GQLGLGD E R +I F S + +++ GS +A LT
Sbjct: 112 ----GGNNEGQLGLGDTEERSTFHLISFFT--SQRKIKQLSAGSNTSAALTEDG------ 159
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W G GQ+G + VP+QV + + + +S CG +H++ V++ G ++++
Sbjct: 160 ELFMW--GDNSEGQIGLENVTNVCVPQQVT-VGKPISWIS--CGYYHSAFVTTEGQLYTF 214
Query: 206 GM-EKG-LGLCPNASLTRN 222
G E G LGL PN L +
Sbjct: 215 GEPECGKLGL-PNQLLVNH 232
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
F G+N GQ+G + VP+QV + + + +S CG +H++ V++ G ++++G E
Sbjct: 162 FMWGDNSEGQIGLENVTNVCVPQQVT-VGKPISWIS--CGYYHSAFVTTEGQLYTFGEPE 218
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL PN L + + I P G VQVACG HTV++T+ ++
Sbjct: 219 CGKLGL-PNQLLVNHRMPQPVPGI------P-GKV----VQVACGGGHTVVLTEKA--VY 264
Query: 268 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 306
++G G+ G LG G + F ++ P E K +++
Sbjct: 265 TFGLGQFGQLGLGTFL--FETSV---PKAIEHIKDQKIS 298
Score = 120 (47.3 bits), Expect = 0.00097, P = 0.00097
Identities = 45/148 (30%), Positives = 75/148 (50%)
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPWAVYEVTCGSFH 131
SA T +G+ Y++G G+LGL ++ + P+ + P V +V CG H
Sbjct: 202 SAFVTTEGQ---LYTFGEPECGKLGLPNQLLVNHRMPQPVPGI----PGKVVQVACGGGH 254
Query: 132 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELP-QYVYLVSVDCG 189
T +LT E +TFGLG+ GQLG GT VP+ ++ + Q + ++ CG
Sbjct: 255 TVVLT---------EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIA--CG 303
Query: 190 LFHTSVVSSAGDVWSWGMEK----GLGL 213
HT++++ G ++++G + GLGL
Sbjct: 304 ENHTALITDMGLMYTFGDGRHGKLGLGL 331
Score = 95 (38.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/137 (27%), Positives = 59/137 (43%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 61
+I + AG S A+ G L+MWG+ +S + G V++ P V G +
Sbjct: 141 KIKQLSAGSNTSAALTEDGELFMWGD----NSEGQIGLENVTNVCVPQQVTV--GKPISW 194
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
++CG H + + G+ Y + C G N QL + R + P I P
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN--QLLVNHRMPQPVPGI--------PGK 244
Query: 122 VYEVTCGSFHTALLTHR 138
V +V CG HT +LT +
Sbjct: 245 VVQVACGGGHTVVLTEK 261
Score = 92 (37.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 144 MLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGD 201
+ E +TFGLG+ GQLG GT VP+ ++ + Q + ++ CG HT++++ G
Sbjct: 258 LTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIA--CGENHTALITDMGL 315
Query: 202 VWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHT 256
++++G + GLGL N I P L S + +F VQ V+CG HT
Sbjct: 316 MYTFGDGRHGKLGLGL-------ENSTNQFI-PTLCS----NFLRFI--VQLVSCGGCHT 361
Query: 257 VL 258
++
Sbjct: 362 LV 363
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 152 (58.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 ME--KGLGLCPNAS 218
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 152 (58.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 ME--KGLGLCPNAS 218
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 ME--KGLGLCPNAS 218
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 74/294 (25%), Positives = 118/294 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 60
I V G ++ + + G L+ +G+ D G VS P + F + V
Sbjct: 426 IHQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 481
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 482 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQRVDV---PKAL 530
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELP- 178
+ V CG T LLT + +L C GL E +LG S ++ E E+P
Sbjct: 531 IIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHEAYHEVPY 582
Query: 179 ----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 228
+ + ++ G HT+ + G + ++G K C + + I
Sbjct: 583 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRLGI 638
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 639 NLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 685
Score = 130 (50.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 371 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 426
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 243
V CG T V+ G ++++G + G C + + + + P+ ++
Sbjct: 427 HQVSCGDDFTVCVTDEGQLYAFGSDY-YG-C--MGVDKVSGPEVLEPMQLNFF------L 476
Query: 244 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 477 SNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 521
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 74/294 (25%), Positives = 118/294 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 60
I V G ++ + + G L+ +G+ D G VS P + F + V
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 483
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 484 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQRVDV---PKAL 532
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELP- 178
+ V CG T LLT + +L C GL E +LG S ++ E E+P
Sbjct: 533 IIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHEAYHEVPY 584
Query: 179 ----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 228
+ + ++ G HT+ + G + ++G K C + + I
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRLGI 640
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 641 NLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 687
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 243
V CG T V+ G ++++G + G C + + + + P+ ++
Sbjct: 429 HQVSCGDDFTVCVTDEGQLYAFGSDY-YG-C--MGVDKVSGPEVLEPMQLNFF------L 478
Query: 244 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 479 SNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 523
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 150 (57.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 64/241 (26%), Positives = 99/241 (41%)
Query: 54 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 496 FSNNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 547
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 172
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 548 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 596
Query: 173 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
E+P + + +V G HT+ + G + ++G K C +
Sbjct: 597 AYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGN 652
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 653 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 705
Query: 282 T 282
T
Sbjct: 706 T 706
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 392 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 447
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPK 242
V CG T V+ G ++++G + G C AG + + P+ ++
Sbjct: 448 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-CMGVDKV---AGPEVLEPMQLNFFS----- 497
Query: 243 FQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 498 -NNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 542
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 148 (57.2 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 54 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 477 FLNNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 528
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 172
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 529 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 577
Query: 173 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 578 AYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGN 633
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 634 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 686
Query: 282 T 282
T
Sbjct: 687 T 687
Score = 129 (50.5 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPK 242
V CG T V+ G ++++G + G C AG + + P+ ++
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-CMGVDKV---AGPEVLEPMQLNFF------ 477
Query: 243 FQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 478 LNNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 523
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 97 (39.2 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 33/107 (30%), Positives = 46/107 (42%)
Query: 188 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 247
CG +V++ G V+ WG LG PN L + I P L G P
Sbjct: 344 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LVETAFPEVIPPTLF-GLTEFNPGVHVS- 398
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+ CG +H +T G +L+ WG+ G LG G+ D + P V P
Sbjct: 399 HIWCGLSHFAALTSKG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 444
Score = 92 (37.4 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 50/182 (27%), Positives = 76/182 (41%)
Query: 39 GFSLVSSFTPSPV-WDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
G+ V +P P+ D T V++V+CG H + L +G +S G N GQ
Sbjct: 155 GYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDC----EG----VFSMGNNAYGQ 206
Query: 97 LGLGDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 155
G E+ + + + QD V +V CG H+ LT + ++ G G
Sbjct: 207 CGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGE--------VYSCGWG 258
Query: 156 ENGQLGHGTTQSALVPEQVKELPQYVYLVSV----DCGLFHTSVVSSAGDVWSWGMEKGL 211
+GQ G G VP ++ V +V V DC L VS+ G ++ WG + L
Sbjct: 259 ADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCCL----AVSAEGGLFGWGNSEYL 314
Query: 212 GL 213
L
Sbjct: 315 QL 316
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/182 (26%), Positives = 85/182 (46%)
Query: 108 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 167
P+ ++ F W +V G H A++T K ++ + G +GQLGHG S
Sbjct: 341 PQKLDVFK--GGWRARQVCAGDAHFAVVTVEK---ELYTWVNMQGGSKLHGQLGHGDRAS 395
Query: 168 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 227
P+ V++L Q + V CG T ++ G ++S+G + G C + ++ +
Sbjct: 396 YRQPKHVEKL-QGKSVQKVSCGSDFTVCITDEGQLYSFGSDY-YG-C--LGVNQSAGSEV 450
Query: 228 ISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 286
+ P+L+ +PV QV+CG +H + +T ++SWG G G LG D +
Sbjct: 451 LEPLLVDFF------LNEPVDQVSCGDSHIMALTRSK-SVYSWGCGEYGRLGLDSEDDVY 503
Query: 287 AP 288
+P
Sbjct: 504 SP 505
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 74/289 (25%), Positives = 116/289 (40%)
Query: 7 VKAGGMMSLAIDNAGALWMWGN----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
V G ++ I + G L+ +G+ C L + + G L P V F V +V
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGC-LGVNQSAGSEVL----EPLLVDFFLNEPVDQV 467
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
+CG H++AL + Y SWG G+LGL + P+ +E +
Sbjct: 468 SCGDSHIMALTRSKSVY--------SWGCGEYGRLGLDSEDDVYSPQKVEV---QRGLCI 516
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELPQYV 181
V CGS + LLT L GL E+ +LG + ++ E +E+P
Sbjct: 517 VNVCCGSDGSFLLT--------LTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTT 568
Query: 182 YLV-----------SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT--RNEAGDAI 228
L S+ G HT+ + G + ++G K C + R G
Sbjct: 569 SLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNK----CGQLGVGDYRKHLG--- 621
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 277
I + G GP G K ++V+CG T T D + +++WG G +G L
Sbjct: 622 --INLLG-GPLGGK--QVIRVSCGDEFTTAATADNH-IFAWGNGGNGRL 664
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 87 YSWGANNNGQLGLGDRESR--LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 144
YS+G++ G LG+ L P +++ F + P V +V+CG H LT K
Sbjct: 430 YSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNE-P--VDQVSCGDSHIMALTRSKS---- 482
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+++G GE G+LG + P++V E+ + + +V+V CG + +++ G V +
Sbjct: 483 ----VYSWGCGEYGRLGLDSEDDVYSPQKV-EVQRGLCIVNVCCGSDGSFLLTLTGKVLA 537
Query: 205 WGMEKG--LGLCP-NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
G+ + LGL A + +EA + P S F ++ G HT + +
Sbjct: 538 CGLNEHNKLGLNQYTAGIINHEAFQEV-PYTTSLTLAKQLSFYKIRSISPGRTHTAAIDE 596
Query: 262 DGYKLWSWGRGRSGVLGTG 280
G +L ++G + G LG G
Sbjct: 597 RG-RLLTFGSNKCGQLGVG 614
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 54 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 528
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 172
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 529 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 577
Query: 173 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGN 633
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 634 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 686
Query: 282 T 282
T
Sbjct: 687 T 687
Score = 129 (50.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPK 242
V CG T V+ G ++++G + G C AG + + P+ ++
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-CMGVDKV---AGPEVLEPMQLNFF------ 477
Query: 243 FQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 523
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 130 (50.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 45/164 (27%), Positives = 79/164 (48%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--------PKI 110
+++++CGS H++AL + Y YSWG+ +G+LG G+ S + PK
Sbjct: 371 IIQISCGSNHILAL---SDQYH-----VYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKK 422
Query: 111 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 170
I++ Q+ V V+ G H LT L+S T+G G +GQLG G
Sbjct: 423 IKSL-QEKGVTVISVSSGYSHCMALT--------LDSGILTWGKGSDGQLGTGFRHDIWS 473
Query: 171 PEQVKE-LPQYVYLVSVDCGLFHTSVVS-SAGDVWSWGMEKGLG 212
P ++K + + +V + CG F++ ++ +++ +G LG
Sbjct: 474 PFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELYQFGWSIPLG 517
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 61/250 (24%), Positives = 105/250 (42%)
Query: 90 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 149
G+N+N LG G + L+ + T +Q + + +++CGS H L+ D
Sbjct: 344 GSNDNNFLG-GVINNELQ---MMT-DQMNSIKIIQISCGSNHILALS------DQYHVYS 392
Query: 150 WTFGLGENGQLGHGTTQSALV--------PEQVKELPQY-VYLVSVDCGLFHTSVVSSAG 200
W G E+G+LGHG S + P+++K L + V ++SV G H ++
Sbjct: 393 W--GSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDS 450
Query: 201 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 260
+ +WG KG + L D SP I K VQ+ CG ++ +T
Sbjct: 451 GILTWG--KG----SDGQLGTGFRHDIWSPFEIKRVIDKNEKI---VQICCGYFNSFFIT 501
Query: 261 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW-PPLTEEFKQDELNTGGLDDEIKTKDL 319
+ +L+ +G + GK+ D P +W PL + +E N DD+ D
Sbjct: 502 LEKRELYQFGWS----IPLGKSDDILIPTKFIWLNPLKNKNNNNE-NEDKKDDDDDNDDE 556
Query: 320 EGAEERDEKL 329
+ + ++
Sbjct: 557 DENNDNSNRI 566
Score = 75 (31.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/104 (25%), Positives = 44/104 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLP------DSSTEGGFSL-VSSFTPSPVWDFHG 56
I + G +L + ++G L+ WG+ DS + G + F S + G
Sbjct: 40 IVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKF--SLIKALSG 97
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 100
+V++V+ G + L G Y +WG+N GQL LG
Sbjct: 98 DSVIQVSTGLDFTFVLTDQGSIY--------NWGSNIEGQLALG 133
Score = 57 (25.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 26/113 (23%), Positives = 53/113 (46%)
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG---KTID--FFA--PAIV--LWPPLTE 298
Q++ G +HT+++ ++G L S G+G G LG +ID F P ++ L P E
Sbjct: 568 QISSGYSHTLILNENGECL-SIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFVE 626
Query: 299 EFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS 351
+ ++ + + ++L +KL ++ + Q+ L ++E + S
Sbjct: 627 SVQCGRWHSVAI---VSNRNLRDHLTNSKKLKEKQKQKQ--QTNLEILEEFES 674
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 119 (46.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+ G NN GQLGLGD + R +I F S + +++ GS +A LT E
Sbjct: 6 YATGGNNEGQLGLGDTDERSAFHLISFFT--SQHKIKQLSAGSNTSAALT--------AE 55
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWS 204
+TFG E+G+LG LV +V +L + ++ V CG HT V++ V++
Sbjct: 56 GELYTFGEPESGKLG--LPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYT 112
Query: 205 WGM----EKGLG 212
+G+ + GLG
Sbjct: 113 FGLGQFGQLGLG 124
Score = 115 (45.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 42/140 (30%), Positives = 68/140 (48%)
Query: 66 SEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQD 117
S+H + +SAG T +GE Y++G +G+LGL + + P+++ ++
Sbjct: 35 SQHKIKQLSAGSNTSAALTAEGE---LYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEK 91
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V +V CG HT +LT E +TFGLG+ GQLG GT +V E
Sbjct: 92 ----VIQVACGGGHTVVLT---------EKAVYTFGLGQFGQLGLGTFTFETSEPKVIES 138
Query: 178 PQYVYLVSVDCGLFHTSVVS 197
+ + V CG HT++++
Sbjct: 139 VKDKKISHVCCGENHTALIT 158
Score = 113 (44.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/137 (32%), Positives = 60/137 (43%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPVWDFHGHTVV 60
+I + AG S A+ G L+ +G P+S G LV+ P V V+
Sbjct: 38 KIKQLSAGSNTSAALTAEGELYTFGE---PESGKLGLPPKLLVNHKVPQLVPGI-SEKVI 93
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSP 119
+VACG H V L E V Y++G GQLGLG PK+IE+
Sbjct: 94 QVACGGGHTVVLT--------EKAV-YTFGLGQFGQLGLGTFTFETSEPKVIESVKDKK- 143
Query: 120 WAVYEVTCGSFHTALLT 136
+ V CG HTAL+T
Sbjct: 144 --ISHVCCGENHTALIT 158
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 78/300 (26%), Positives = 122/300 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 61
I V AG S A+ + G ++ WG D GF + TP + D +
Sbjct: 233 IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGIL--GFDAKTKVQTTPKLLPDLK--KIKH 288
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
+ CG HV+AL KG L SWG+ QLG E R + ++ P
Sbjct: 289 LVCGDNHVLALND-----KGAVL---SWGSGQQNQLGRRIIE-RNKLNGLQPREFGLPKG 339
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALV-PEQVKELP 178
+ + G+FH+ H+ + W GE G + G +++A+V P V L
Sbjct: 340 IVHIGAGAFHS-FAVHQSG-----KVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLS 393
Query: 179 QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGL--GL----CPNASLTRNEAGDAISPI 231
+ V+ CG H S+ ++ G+ WG G GL P+ ++ ++E D I
Sbjct: 394 KKN--VTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDER-DR-PRI 449
Query: 232 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
LI G K + VA G+ H++ + G + WSWG + G G D ++
Sbjct: 450 LIEPTAVPGIKAK---AVAAGSDHSIAIDTSG-RPWSWGFSATYQTGQGTQDDVEVATVI 505
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 79/308 (25%), Positives = 129/308 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWG---NCPLP-DSSTEGGFSLV----------SSFTPS 49
+ V GGM +A+ + + WG L D++ EGG+ + S +
Sbjct: 150 VVQVAVGGMHCVALTHDNKVLTWGVNDQGALGRDTTWEGGYKDMDNRDSDSDSDSDSDDN 209
Query: 50 PVWDFHGHTVVKVACGSE---H--VVALVSAGETYK---GEDLVCYSWGA--NNNGQLGL 99
P D + H A S H V+ V+AG++ ++ Y WG +N+G LG
Sbjct: 210 P--DLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGF 267
Query: 100 GDRESRLR--PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 157
D +++++ PK++ + + + CG H L ND + W G G+
Sbjct: 268 -DAKTKVQTTPKLLPDLKK-----IKHLVCGDNHVLAL------NDKGAVLSW--GSGQQ 313
Query: 158 GQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 216
QLG + + L Q +E +V + G FH+ V +G V++WG+ G
Sbjct: 314 NQLGRRIIERNKLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNS-FG---- 368
Query: 217 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 276
+ R AGD+ + I + ++ Q+ GA H++ T DG L WGR G
Sbjct: 369 ETGIRENAGDSEAAI-VHPTVVDSLSKKNVTQICGGAHHSIAATQDGECL-VWGR-LDGY 425
Query: 277 LGTGKTID 284
TG ID
Sbjct: 426 Q-TGLKID 432
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 155 (59.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 ME--KGLGLCPNAS 218
+ LGL P S
Sbjct: 255 LNIFHQLGLIPPPS 268
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 290 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 322
I+ PP T K + N+ E+ T D EG+
Sbjct: 1001 IIQSPPSTGLLKSGKTNSVESLPELLTSDSEGS 1033
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 54 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 494 FLSNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 545
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 172
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 546 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 594
Query: 173 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 595 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNK----CGQLGVGN 650
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 651 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 703
Query: 282 T 282
T
Sbjct: 704 T 704
Score = 130 (50.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 390 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 445
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 243
V CG T V+ G ++++G + G C + + + + P+ +
Sbjct: 446 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-C--MGVDKVAGAEVLEPMQLDFF------L 495
Query: 244 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 496 SNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 540
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 65/227 (28%), Positives = 98/227 (43%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ + G +++WG+ D++ G L+ S PV VV
Sbjct: 137 KVVQVSAGDSHTAALTDDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLDVPVV 192
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 193 KVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 246
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ S V + CG++ T ++H E + FGL QLG T+S
Sbjct: 247 MLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGHVYGFGLSNYHQLGTPGTESCF 298
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGL 213
+P+ + V G HT + S G +S G E G LGL
Sbjct: 299 IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGL 345
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 79/297 (26%), Positives = 118/297 (39%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVK 61
+ +AGGM ++ + +G ++ +G C D G + V S P V + VV+
Sbjct: 86 VVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EKVVQ 140
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQDSP 119
V+ G H AL G + WG+ +NNG +GL E + + D P
Sbjct: 141 VSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQLDVP 190
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------GTTQSA--- 168
V +V G+ H +LT D+ +T G GE GQLG G Q
Sbjct: 191 --VVKVASGNDHLVMLT---ADGDL-----YTLGCGEQGQLGRVPELFANRGGRQGLERL 240
Query: 169 LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 224
LVP+ V + +V CG + T +S G V+ G GL L
Sbjct: 241 LVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY------GFGLSNYHQLGTPGT 294
Query: 225 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
P ++ + + K V + G HTV + +G K +S GR G LG G+
Sbjct: 295 ESCFIPQNLT-SFKNSTKSW--VGFSGGQHHTVCMDSEG-KAYSLGRAEYGRLGLGE 347
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 42 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 97
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 98 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 146
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +TDDG +++ WG R +GV+G
Sbjct: 147 HTAALTDDG-RVFLWGSFRDNNGVIG 171
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 154 (59.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLC-KFHSVFLSQK-------- 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 ME--KGLGLCPNAS 218
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 290 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 322
I+ PP T K + N+ E+ T D EG+
Sbjct: 999 IIQSPPSTGLLKSGKTNSVESLPELLTSDSEGS 1031
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 131 (51.2 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 52 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 111
WD + V+ + GS+H +A G+ Y SWG NG+LGLG+ +S +P++I
Sbjct: 434 WDKKKNVVIHCSAGSKHSLACNLHGDIY--------SWGYGGNGRLGLGNIKSYNKPQLI 485
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV- 170
+ +Y V G+ H+ + +T+G G+ +LGHG +
Sbjct: 486 KGLRNKR--ILY-VCAGTSHSGCIDSNYN--------VYTWGNGKFYKLGHGNDDIDIYY 534
Query: 171 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
P+ V+ L + + G F++ ++ GDV+ WG
Sbjct: 535 PKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 105 (42.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSP 119
K++ G +H + YK + + ++WG N+ QLGLG + P ++ F DS
Sbjct: 21 KISTGLDHYACVAY----YKNKPSI-FTWGGNSCNQLGLGINNRFVNNPTVVCFF--DS- 72
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
+ V + C ++ T +L +K ND+ S+ ++FG G NG LG+
Sbjct: 73 FIVASICCTNYATFVLV-KKNVNDIGCSV-YSFGKGNNGLLGY 113
Score = 96 (38.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 241 PKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 299
PK ++ ++CG HT+ + G L+SWG G +G G + + P + P + +
Sbjct: 345 PKKNTKIKFISCGDMHTLAICTGGV-LYSWGYNNFGCIGNGTNQNVYEPTPIFLEPHSVD 403
Query: 300 FKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
D N DD+ ++++ + ++ ++ A LHG I+
Sbjct: 404 NNGDN-NDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIY 461
Score = 84 (34.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 184 VSVDC--GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
V + C G H+ + GD++SWG G G N L P LI G
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGY--G-G---NGRLGLGNIKSYNKPQLIKGL----- 488
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 291
+ + + V G +H+ + D Y +++WG G+ LG G ID + P +V
Sbjct: 489 RNKRILYVCAGTSHSGCI-DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 83 (34.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 62/266 (23%), Positives = 107/266 (40%)
Query: 144 MLES-MCWTFGLGENGQLGHGT---TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+LES +T G +NG+LG+G + VP + + + + CG + VS
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKI--IKIACGYNYVLCVSDV 824
Query: 200 GDVWSWGM----EKGLGLCPN-------ASLTR--------NEAGDAISPILISGNGPHG 240
G V+ WG + G+G+ + +LT + + I+ +L GN +G
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYDHSACIINKLLDKGN-TNG 883
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 300
+ V G + +D+ L+ WG SG +G G +D+ I+L +
Sbjct: 884 VNNVNNVNGVNGVNN--YSSDECGDLYIWGNAESGKVGLG--VDYTQGCILLPRKINIIN 939
Query: 301 KQDELNTGGLDDEI--KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
K + + G T +L + E+ K++ + +SV + ILH +I+
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKV--ILHNNIY 997
Query: 359 GKPFAAEQDIPISLKDMGFFDITKEW 384
K A I L GF I E+
Sbjct: 998 IKDILAGNTYSIILSVDGFIYIFGEF 1023
Score = 80 (33.2 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G G NG+LG G +S P+ +K L + ++ V G H+ + S +V++WG K
Sbjct: 461 YSWGYGGNGRLGLGNIKSYNKPQLIKGL-RNKRILYVCAGTSHSGCIDSNYNVYTWGNGK 519
Score = 52 (23.4 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 236 NGPHGPKFQ-------DPVQVACGAAH-TVLVTDDGYKLWSWGRGRSGVLGTGK 281
NG HG F+ V++ G+ H +V + + G K+++ G ++G LG G+
Sbjct: 736 NGSHGNIFEKNKLVLKSKVKIIDGSDHFSVFLLESG-KVYTAGYNKNGELGNGE 788
Score = 50 (22.7 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWG 27
++I + G M +LAI G L+ WG
Sbjct: 349 TKIKFISCGDMHTLAICTGGVLYSWG 374
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 131 (51.2 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 52 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 111
WD + V+ + GS+H +A G+ Y SWG NG+LGLG+ +S +P++I
Sbjct: 434 WDKKKNVVIHCSAGSKHSLACNLHGDIY--------SWGYGGNGRLGLGNIKSYNKPQLI 485
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV- 170
+ +Y V G+ H+ + +T+G G+ +LGHG +
Sbjct: 486 KGLRNKR--ILY-VCAGTSHSGCIDSNYN--------VYTWGNGKFYKLGHGNDDIDIYY 534
Query: 171 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
P+ V+ L + + G F++ ++ GDV+ WG
Sbjct: 535 PKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 105 (42.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSP 119
K++ G +H + YK + + ++WG N+ QLGLG + P ++ F DS
Sbjct: 21 KISTGLDHYACVAY----YKNKPSI-FTWGGNSCNQLGLGINNRFVNNPTVVCFF--DS- 72
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
+ V + C ++ T +L +K ND+ S+ ++FG G NG LG+
Sbjct: 73 FIVASICCTNYATFVLV-KKNVNDIGCSV-YSFGKGNNGLLGY 113
Score = 96 (38.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 241 PKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 299
PK ++ ++CG HT+ + G L+SWG G +G G + + P + P + +
Sbjct: 345 PKKNTKIKFISCGDMHTLAICTGGV-LYSWGYNNFGCIGNGTNQNVYEPTPIFLEPHSVD 403
Query: 300 FKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
D N DD+ ++++ + ++ ++ A LHG I+
Sbjct: 404 NNGDN-NDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIY 461
Score = 84 (34.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 184 VSVDC--GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
V + C G H+ + GD++SWG G G N L P LI G
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGY--G-G---NGRLGLGNIKSYNKPQLIKGL----- 488
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 291
+ + + V G +H+ + D Y +++WG G+ LG G ID + P +V
Sbjct: 489 RNKRILYVCAGTSHSGCI-DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 83 (34.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 62/266 (23%), Positives = 107/266 (40%)
Query: 144 MLES-MCWTFGLGENGQLGHGT---TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
+LES +T G +NG+LG+G + VP + + + + CG + VS
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKI--IKIACGYNYVLCVSDV 824
Query: 200 GDVWSWGM----EKGLGLCPN-------ASLTR--------NEAGDAISPILISGNGPHG 240
G V+ WG + G+G+ + +LT + + I+ +L GN +G
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYDHSACIINKLLDKGN-TNG 883
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 300
+ V G + +D+ L+ WG SG +G G +D+ I+L +
Sbjct: 884 VNNVNNVNGVNGVNN--YSSDECGDLYIWGNAESGKVGLG--VDYTQGCILLPRKINIIN 939
Query: 301 KQDELNTGGLDDEI--KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 358
K + + G T +L + E+ K++ + +SV + ILH +I+
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKV--ILHNNIY 997
Query: 359 GKPFAAEQDIPISLKDMGFFDITKEW 384
K A I L GF I E+
Sbjct: 998 IKDILAGNTYSIILSVDGFIYIFGEF 1023
Score = 80 (33.2 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G G NG+LG G +S P+ +K L + ++ V G H+ + S +V++WG K
Sbjct: 461 YSWGYGGNGRLGLGNIKSYNKPQLIKGL-RNKRILYVCAGTSHSGCIDSNYNVYTWGNGK 519
Score = 52 (23.4 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 236 NGPHGPKFQ-------DPVQVACGAAH-TVLVTDDGYKLWSWGRGRSGVLGTGK 281
NG HG F+ V++ G+ H +V + + G K+++ G ++G LG G+
Sbjct: 736 NGSHGNIFEKNKLVLKSKVKIIDGSDHFSVFLLESG-KVYTAGYNKNGELGNGE 788
Score = 50 (22.7 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWG 27
++I + G M +LAI G L+ WG
Sbjct: 349 TKIKFISCGDMHTLAICTGGVLYSWG 374
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 154 (59.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLC-KFHSVFLSQK-------- 195
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGH-NCSQVAAAKDHTVVLTDDGCVYTFG 254
Query: 207 MEK--GLGLCP 215
+ LG+ P
Sbjct: 255 LNMFHQLGIIP 265
Score = 37 (18.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 309 GLDDEIKTKDLEGAEERD--EKLSSAMEEMKLLQSKLSVMER 348
G+ D+ + L+ ++ LSS +E ++L K++V+ +
Sbjct: 711 GVGDDDPVRMLQSVAKKFGLSNLSSRLEGVRLENEKINVIAK 752
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 98 (39.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L + WT+G G+ GQLGHG L P VK L ++ ++ G H+ +++ V+S
Sbjct: 518 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGSHSLALTAKSQVYS 576
Query: 205 WG 206
WG
Sbjct: 577 WG 578
Score = 97 (39.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 40/149 (26%), Positives = 64/149 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT----- 58
+ +V G S A+ +G ++MWG + VS PSPV T
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQ-QYVSE--PSPVSISDSETSPLLA 149
Query: 59 --VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 115
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 150 VRILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL- 198
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDM 144
+ V +V CG+FH+ L P D+
Sbjct: 199 --AGRVVLQVACGAFHSLALVQCLPPQDL 225
Score = 77 (32.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 151 RILQLACGEEHTLALSISREIWAWGTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 206 VACGAFHSLALV 217
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 136 (52.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 52/192 (27%), Positives = 90/192 (46%)
Query: 27 GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVC 86
G L D+ F + FTP+ T+ +++ G+ AL G+ +
Sbjct: 117 GQLGLGDTDDRDTFHQIVFFTPAD-------TIKQLSAGANTSAALTEDGKLFM------ 163
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
WG N+ GQ+GL D+ + P + T + W ++CG +H+A +T ++
Sbjct: 164 --WGDNSEGQIGLEDKSNVCIPHEV-TVGKPISW----ISCGYYHSAFVT--------MD 208
Query: 147 SMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
+TFG ENG+LG + + P++V +P+ V + V CG HT VV + V++
Sbjct: 209 GELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV--IQVACGGGHT-VVLTEKVVYA 265
Query: 205 WGM----EKGLG 212
+G+ + GLG
Sbjct: 266 FGLGQFGQLGLG 277
Score = 122 (48.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
SA T GE Y++G NG+LGL + E + + + P V +V CG HT
Sbjct: 202 SAFVTMDGE---LYTFGEPENGKLGLPN-ELLMNHRSPQRV-LGIPERVIQVACGGGHTV 256
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKELPQYVYLVSVDCG 189
+LT E + + FGLG+ GQLG GT T + E++K+ Q + +S CG
Sbjct: 257 VLT---------EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKD--QKICHIS--CG 303
Query: 190 LFHTSVVSSAGDVWSWG 206
HT++++ G ++++G
Sbjct: 304 ENHTALMTELGLLYTFG 320
Score = 119 (46.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 42/133 (31%), Positives = 72/133 (54%)
Query: 152 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
F G+N GQ+G + +P +V + + + +S CG +H++ V+ G+++++G E
Sbjct: 162 FMWGDNSEGQIGLEDKSNVCIPHEVT-VGKPISWIS--CGYYHSAFVTMDGELYTFGEPE 218
Query: 209 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 267
G LGL PN L + SP + G P + +QVACG HTV++T+ ++
Sbjct: 219 NGKLGL-PNELLMNHR-----SPQRVLGI----P--ERVIQVACGGGHTVVLTEK--VVY 264
Query: 268 SWGRGRSGVLGTG 280
++G G+ G LG G
Sbjct: 265 AFGLGQFGQLGLG 277
Score = 117 (46.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 45/168 (26%), Positives = 71/168 (42%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
PS W F + ++CG EH A+V+ G + + Y +G+NN GQLGLG + + ++
Sbjct: 27 PSKFW-FKNDIPICLSCGDEHT-AIVT------GNNKL-YMFGSNNWGQLGLGSKAAIIK 77
Query: 108 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 167
P I+ P V CG HT + T + G GQLG G T
Sbjct: 78 PTCIKALK---PEKVKLAACGRNHTLVSTDT--------GGVYAAGGNNEGQLGLGDTDD 126
Query: 168 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGL 213
Q+ + + G ++ ++ G ++ WG E +GL
Sbjct: 127 RDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL 174
Score = 51 (23.0 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 294 PPLTEEFKQDELNTGGLDDEIKTKDLEGA--EERDEKLSSAMEE 335
P L+E K +E G +D+EI ++E EER E +EE
Sbjct: 819 PQLSETVKPEE---GEMDEEISILNVEDTVEEERKEGEKEIVEE 859
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 96 (38.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 78 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 137
T G LVC G + GQLGLG E L K + P AV +++ G H +LT
Sbjct: 39 TVLGNVLVC---GNGDVGQLGLG--EDILERKRLSPV-AGIPDAV-DISAGGMHNLVLT- 90
Query: 138 RKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSV 195
+ D+ ++FG + G LG T++ S P+ + +LP +S G H++
Sbjct: 91 --KSGDI-----YSFGCNDEGALGRDTSEDGSESKPDLI-DLPGKALCISA--GDSHSAC 140
Query: 196 VSSAGDVWSWG 206
+ G V++WG
Sbjct: 141 LLEDGRVFAWG 151
Score = 87 (35.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 306
V V CG + VT DG KL+SWG G + LG G D P +V+ + K L
Sbjct: 348 VSVGCGEVCSYAVTIDG-KLYSWGSGVNNQLGVGDGDDELEPIVVV--SKNTQGKHMLLA 404
Query: 307 TGGLDDEIKTKDLEGAEERDEK 328
+GG I L A+++D+K
Sbjct: 405 SGGGQHAIF---LVKADKQDQK 423
Score = 77 (32.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C + AG S + G ++ WG+ DS G ++ + +P+ G +A
Sbjct: 129 LC-ISAGDSHSACLLEDGRVFAWGS--FRDSHGNMGLTIDGN-KRTPIDLMEGTVCCSIA 184
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGA----NNNGQLGLGDRESR--LRP-KIIETFNQ 116
G++H+V L +AG+ + + C G + G G R R LRP ++I T +
Sbjct: 185 SGADHLVILTTAGKVFT---VGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIIT--R 239
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT--QSALVPEQV 174
P+ T ++ T + R+ ++ W GL QL H T + AL P +
Sbjct: 240 AKPFEAIWAT--NYCTFM---RESQTQVI----WATGLNNFKQLAHETKGKEFALTPIKT 290
Query: 175 KELPQYVYLVSVDCGLFHTSVVSS 198
EL ++ G HT ++++
Sbjct: 291 -ELKDIRHIAG---GQHHTVILTT 310
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 140 (54.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 68/284 (23%), Positives = 114/284 (40%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V G ++ I + G L+ +G+ + + P + F + V +V+
Sbjct: 438 IRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGS-EVLEPLQLDFFLTNPVEQVS 496
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG HV L E Y +WG G+LGL E P+ ++ +
Sbjct: 497 CGDNHVAVLTRNREVY--------TWGCGEYGRLGLDSEEDHYTPQKVDV---PKTLNIV 545
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE--NGQLGHGT---TQSALVPEQVKELP 178
V CG T LLT + + GL + +G + H T A K+L
Sbjct: 546 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 605
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
Y + ++ G HT+ + G + ++G K C + + I+ L++G P
Sbjct: 606 FYK-IRTISPGKTHTASIDERGRLLTFGSNK----CGQLGVGDYKKHLGIN--LLAG--P 656
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 657 LGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 697
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 102 (41.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 115 NQDSPWAVYEVTCGSFHTALLT--HRKRPNDMLESM---CWTFGLGENGQLGHGTTQSAL 169
+Q SP + +V T LT + + +L S+ W++G G++GQLGHG L
Sbjct: 484 SQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPRL 543
Query: 170 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
P VK L ++ + G H+ +++ V+SWG
Sbjct: 544 QPLCVKSLDGKE-VIQLSAGGHHSLALTAKSQVYSWG 579
Score = 90 (36.7 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 36/140 (25%), Positives = 64/140 (45%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 56
+ +V AG + A+ G ++MWGN C + + E +S SP+
Sbjct: 93 VITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVR- 151
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 115
V+++ACG EH +AL + E + +WG+ QLGL + +P+ +E
Sbjct: 152 --VLQLACGEEHTLALSLSREIW--------AWGSGC--QLGLITTTFPVTKPQKVEHL- 198
Query: 116 QDSPWAVYEVTCGSFHTALL 135
+ V ++ CG++H+ L
Sbjct: 199 --AGRVVLQIACGAYHSLAL 216
Score = 77 (32.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
++ + G +LA+ + +W WG+ C L +T F + P V G V++
Sbjct: 151 RVLQLACGEEHTLALSLSREIWAWGSGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
+ACG+ H +ALV
Sbjct: 206 IACGAYHSLALV 217
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 104 (41.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L + WT+G G++GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 518 LRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 576
Query: 205 WG 206
WG
Sbjct: 577 WG 578
Score = 87 (35.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 36/140 (25%), Positives = 62/140 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 56
+ +V G S A+ +G ++MWG C + + E +S SP+
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVR- 151
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 115
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 --ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL- 198
Query: 116 QDSPWAVYEVTCGSFHTALL 135
+ V +V CG+FH+ L
Sbjct: 199 --AGRVVLQVACGAFHSLAL 216
Score = 77 (32.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 151 RILQLACGEEHTLALSISREIWAWGTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 206 VACGAFHSLALV 217
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 98 (39.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L + WT+G G+ GQLGHG L P VK L ++ ++ G H+ +++ V+S
Sbjct: 518 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGSHSLALTAKSQVYS 576
Query: 205 WG 206
WG
Sbjct: 577 WG 578
Score = 93 (37.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 58
+ +V G S A+ +G ++MWG C + + S VS + S
Sbjct: 93 VITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVS-ISDSETSPSLAVR 151
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQD 117
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 ILQLACGEEHTLALSLSREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL--- 198
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDM 144
+ V +V CG+FH+ L P D+
Sbjct: 199 AGRVVLQVACGAFHSLALVQCLPPQDL 225
Score = 77 (32.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 151 RILQLACGEEHTLALSLSREIWAWGTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 206 VACGAFHSLALV 217
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 75 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 134
A ET V ++WGAN+ GQLGLG +E P+ + F Q + VT G H+A+
Sbjct: 7 ASETVSAA-AVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAG--CIKSVTGGGGHSAV 63
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
+T D+ +C GL ++GQLG G T+ L K L + + V CG T
Sbjct: 64 VTDG---GDLF--VC---GLNKDGQLGLGHTEEVLRFTICKPL-RGCPIRQVACGWDFTI 114
Query: 195 VVSSAGDVWSWG 206
+++ G V S G
Sbjct: 115 MLTEKGQVLSCG 126
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WGAN+ GQLG G+ E + P+ +E+ Q+ + VT G H+AL++ ++L
Sbjct: 40 YTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQ--IRAVTGGGGHSALISDS---GELL- 93
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+C G GQLG G T ++ Q LP + + V CG T +++ G V + G
Sbjct: 94 -VC---GQNHKGQLGLGHTLE-IMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACG 148
Score = 116 (45.9 bits), Expect = 0.00083, P = 0.00083
Identities = 61/224 (27%), Positives = 86/224 (38%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDS----STEGGFSLVSSFTPSPVWDFHGHTV 59
+ SV AG +LA +G ++ WG + + + S +SS P V F T
Sbjct: 177 VTSVAAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTT 236
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
KV GS H L T GE + WG+N +GQL G L + + QD
Sbjct: 237 QKVIAGSAHCACL-----TVNGE---LFLWGSNKHGQLISGSLFLPLPVALDRSMLQDE- 287
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCW-TFGLGENGQLGHGTTQSALVPEQVK--- 175
V +V G H T R W G+ GQ H + + V+
Sbjct: 288 -RVSDVHSGWTHLVAQTESGRV------FTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPV 340
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 219
E+ + CG H V G V+SWG + G+C + SL
Sbjct: 341 EVKALFGATQISCGSEHNLAVVG-GRVFSWGWNEH-GMCGDGSL 382
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 119 (46.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKELPQY 180
V G H LLT +P+D ++FG L + + ++ + + QY
Sbjct: 43 VLHAALGVKHGVLLTEVFKPSD---GEVYSFGTLPWRSEPAETCPSNPILESAL--VGQY 97
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
V V+V G FHT V+ +G V+ WG E G C ++ +P+ IS +
Sbjct: 98 V--VTVATGSFHTGAVTDSGVVYMWG-ENSAGQC---AVANQPYVPEPNPVSIS-DSETS 150
Query: 241 PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRG-RSGVLGT 279
P + Q+ACG HT L ++W+WG G + G++ T
Sbjct: 151 PLLAVRILQLACGEEHT-LALSLSREIWAWGTGCQLGLITT 190
Score = 103 (41.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L + WT+G G+ GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 528 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 586
Query: 205 WG 206
WG
Sbjct: 587 WG 588
Score = 84 (34.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 56
+ +V G + A+ ++G ++MWG C + + E +S SP+
Sbjct: 98 VVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVR- 156
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 115
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 157 --ILQLACGEEHTLALSLSREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL- 203
Query: 116 QDSPWAVYEVTCGSFHTALL 135
+ V +V CG+FH+ L
Sbjct: 204 --AGRVVLQVACGAFHSLAL 221
Score = 77 (32.2 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 156 RILQLACGEEHTLALSLSREIWAWGTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQ 210
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 211 VACGAFHSLALV 222
Score = 64 (27.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++W+WG+G+ G LG G + P V
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCV 557
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 113 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
T Q+ P A E+ G+ TA + P D++
Sbjct: 298 TLVQNEPPAATELNVGNVQTASVQTTSFPQDIM 330
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
++WGAN+ GQLGLG +E L P+ + F + P +V +T G H+A++T D+
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLNDFCK--PRSVRRITGGGGHSAVVTDG---GDLF- 71
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+C GL ++GQLG G T+ K L + V CG T +++ G V S G
Sbjct: 72 -VC---GLNKDGQLGLGHTEDIPYFTPCKSLFGCP-IQQVACGWDFTIMLTENGQVLSCG 126
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 75/280 (26%), Positives = 115/280 (41%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSL-VSSFTPSPVWDFHGHTVVKVAC 64
+ GG S + + G L++ C L G G + + FTP G + +VAC
Sbjct: 54 ITGGGGHSAVVTDGGDLFV---CGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQQVAC 108
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSPWAVY 123
G + + L T G+ L C G+N+ GQLG+ R + P+ IE + V
Sbjct: 109 GWDFTIML-----TENGQVLSC---GSNSFGQLGVPHGPRRCVVPQAIELHKEK----VV 156
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ-LGHGTTQ----SALVPEQVKELP 178
+ G H T + + W GL G+ L G T +A P +V L
Sbjct: 157 CIAAGLRHAVAAT---ASGIVFQ---WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGL- 209
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+ + V G H++ ++ AG+V+ WG K + L NEA P I
Sbjct: 210 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNK------HGQLA-NEAAFLPVPQKIEA--- 259
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
H + + + G H V T+ G K+++WGR G LG
Sbjct: 260 HCFQNEKVTAIWSGWTHLVAQTETG-KMFTWGRADYGQLG 298
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 105 (42.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSVDCGLFHTSVVSSAGDV 202
L + WT+G G+ GQLGHG L P VK L + +YL + G +H+ +++ V
Sbjct: 523 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYL---EAGGYHSLALTAKSQV 579
Query: 203 WSWG 206
+SWG
Sbjct: 580 YSWG 583
Score = 81 (33.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 58
+ +V +G + A+ +G +MWG C + + + VS + S
Sbjct: 93 VVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVS-ISDSETSSLLAVR 151
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQD 117
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL--- 198
Query: 118 SPWAVYEVTCGSFHTALL 135
+ V +V CG+FH+ L
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 77 (32.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 151 RILQLACGEEHTLALSISREIWAWGTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 206 VACGAFHSLALV 217
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 128 (50.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
++WGAN+ GQLGLG +E L P+ + F + P +V +T G H+A++T D+
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLNDFCK--PRSVRRITGGGGHSAVVTDG---GDLF- 71
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+C GL ++GQLG G T+ K L + V CG T +++ G V S G
Sbjct: 72 -VC---GLNKDGQLGLGHTEDIPYFTPCKSLFGCP-IQQVACGWDFTIMLTENGQVLSCG 126
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
++WGAN+ GQLGLG +E L + + F + + +T G H+A++T E
Sbjct: 18 FAWGANSYGQLGLGHKEDVLSAQQLSDFCKSG--CIKRITGGGGHSAVVTD--------E 67
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+ GL ++GQLG G T+ L K L + V CG T +++ G V S G
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCA-IQQVACGWDFTIILTENGQVLSCG 126
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 121 (47.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 103 (41.3 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L + WT+G G+ GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 524 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 582
Query: 205 WG 206
WG
Sbjct: 583 WG 584
Score = 80 (33.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 56
+ +V G S A+ + G +MWG C + + E ++ SP+
Sbjct: 93 VITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVR- 151
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 115
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 --ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTAFPVTKPQKVEHL- 198
Query: 116 QDSPWAVYEVTCGSFHTALL 135
+ V +V CG+FH+ L
Sbjct: 199 --AGRVVLQVACGAFHSLAL 216
Score = 78 (32.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 151 RILQLACGEEHTLALSISREIWAWGTGCQLGLITT--AFPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 206 VACGAFHSLALV 217
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 103 (41.3 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 145 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 204
L + WT+G G+ GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 524 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 582
Query: 205 WG 206
WG
Sbjct: 583 WG 584
Score = 80 (33.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 56
+ +V G S A+ + G +MWG C + + E ++ SP+
Sbjct: 93 VVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVR- 151
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 115
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 --ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTAFPVTKPQKVEHL- 198
Query: 116 QDSPWAVYEVTCGSFHTALL 135
+ V +V CG+FH+ L
Sbjct: 199 --AGRVVLQVACGAFHSLAL 216
Score = 78 (32.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
+I + G +LA+ + +W WG C L +T F + P V G V++
Sbjct: 151 RILQLACGEEHTLALSISREIWAWGTGCQLGLITT--AFPVTK---PQKVEHLAGRVVLQ 205
Query: 62 VACGSEHVVALV 73
VACG+ H +ALV
Sbjct: 206 VACGAFHSLALV 217
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 125 (49.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 50/176 (28%), Positives = 75/176 (42%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWS 204
E + FGL QLG +T + VP ++ V G HT ++S G +S
Sbjct: 255 EGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYS 314
Query: 205 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 262
G E G LGL + G+ P ++ G D VACGA+ + VT
Sbjct: 315 LGRAEYGRLGL-------GKDVGEKSEPTVVPG-------ISDVQVVACGASVSYAVTKQ 360
Query: 263 GYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 318
G ++SWG G + LGTG+ D ++P + L +++GG + KD
Sbjct: 361 G-SVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLS-VSSGGQHTVLLVKD 414
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 60/221 (27%), Positives = 91/221 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V AG S A+ G +++WG+ D++ G PV VVK+
Sbjct: 120 KIIQVSAGDSHSAALTEDGGVYVWGS--FRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKI 177
Query: 63 ACGSEHVVALVSAGETYK---GED----LVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G++H+V L + GE Y GE V + AN G+ GL L P+++
Sbjct: 178 VSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHF-ANRGGRKGL---MRLLEPQMV-IIK 232
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 175
+V CG++ T ++ E + FGL QLG +T + VP ++
Sbjct: 233 PRGKVVFTDVFCGAYFTFAVSK--------EGHVYGFGLSNYHQLGTQSTNTCFVPVKLS 284
Query: 176 ELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGL 213
V G HT ++S G +S G E G LGL
Sbjct: 285 SFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGL 325
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 58/221 (26%), Positives = 95/221 (42%)
Query: 70 VALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCG 128
V+ +S G+ KG LV G + GQLGLG D R +P ++ P + + G
Sbjct: 25 VSHISHGQE-KGLVLVL---GQGDVGQLGLGEDVMERKKPALVTL-----PEGIVQAVAG 75
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYVYLVSV 186
HT L+ +TFG + G LG T++ S VP +V +L + + + V
Sbjct: 76 GMHTVCLSDTGN--------VYTFGCNDEGALGRDTSEEGSETVPAKV-DLGEKI--IQV 124
Query: 187 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 246
G H++ ++ G V+ WG + N + P+ P +
Sbjct: 125 SAGDSHSAALTEDGGVYVWGSFRD----------NNGVIGLLEPMKKCTVPVKVPIDKPV 174
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 287
V++ G H V++T G +L++ G G G LG + + FA
Sbjct: 175 VKIVSGNDHLVMLTAHG-ELYTSGCGEQGQLG--RVAEHFA 212
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 121 (47.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 60/223 (26%), Positives = 92/223 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVK 61
+ +AGGM ++ + +G ++ +G C D G + V S P V + VV+
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EKVVQ 123
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQDSP 119
V+ G H AL G + WG+ +NNG +GL E + + D P
Sbjct: 124 VSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQLDVP 173
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------GTTQSA--- 168
V +V G+ H +LT D+ +T G GE GQLG G Q
Sbjct: 174 --VVKVASGNDHLVMLT---ADGDL-----YTLGCGEQGQLGRVPELFANRGGRQGLERL 223
Query: 169 LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
LVP+ V + +V CG + T +S G V+ +G+
Sbjct: 224 LVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 254
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 255 HTVLVTDDGYKLWSWG--RGRSGVLG 278
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 52/182 (28%), Positives = 81/182 (44%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ + G +++WG+ D++ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWGS--FRDNN--GVIGLLEPMKKSMVPVQVQLDVPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ S V + CG++ T ++H E + FGL QLG T+S
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGHVYGFGLSNYHQLGTPGTESCF 281
Query: 170 VP 171
+P
Sbjct: 282 IP 283
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 60/223 (26%), Positives = 92/223 (41%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVK 61
+ +AGGM ++ + +G ++ +G C D G + V S P V + VV+
Sbjct: 69 VVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EKVVQ 123
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQDSP 119
V+ G H AL G + WG+ +NNG +GL E + + D P
Sbjct: 124 VSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQLDVP 173
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------GTTQSA--- 168
V +V G+ H +LT D+ +T G GE GQLG G Q
Sbjct: 174 --VVKVASGNDHLVMLT---ADGDL-----YTLGCGEQGQLGRVPELFANRGGRQGLERL 223
Query: 169 LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
LVP+ V + +V CG + T +S G V+ +G+
Sbjct: 224 LVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 65/257 (25%), Positives = 107/257 (41%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII--ET 113
G +V++ ++VA + G Y WG N G+LGL D + RL P + +
Sbjct: 236 GDRIVQLNFADRYLVARTAQGHVYV--------WGFNYRGRLGLDDEQDRLHPVELSWDF 287
Query: 114 FNQDSPWA-VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS----A 168
F + P + +V G HT LT + +G GQLG Q A
Sbjct: 288 FPEWHPDDYIIQVVVGDRHTLALTQL--------GYIYAWGKNSYGQLGFRDQQDRNRPA 339
Query: 169 LVPEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
L+P L + ++ + G + + G ++ WG + L L R +
Sbjct: 340 LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA-RWL-------LVRGDPEF 391
Query: 227 AISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
P+L++ N G + + V++ G HT+ T+ GY +++WGR G LG G
Sbjct: 392 RHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGY-IYAWGRNYYGQLGLGDRRI 450
Query: 285 FFAPAIV---LWPPLTE 298
PA++ PPL++
Sbjct: 451 QRQPALLDPNAIPPLSQ 467
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 65/257 (25%), Positives = 107/257 (41%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII--ET 113
G +V++ ++VA + G Y WG N G+LGL D + RL P + +
Sbjct: 236 GDRIVQLNFADRYLVARTAQGHVYV--------WGFNYRGRLGLDDEQDRLHPVELSWDF 287
Query: 114 FNQDSPWA-VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS----A 168
F + P + +V G HT LT + +G GQLG Q A
Sbjct: 288 FPEWHPDDYIIQVVVGDRHTLALTQL--------GYIYAWGKNSYGQLGFRDQQDRNRPA 339
Query: 169 LVPEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
L+P L + ++ + G + + G ++ WG + L L R +
Sbjct: 340 LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA-RWL-------LVRGDPEF 391
Query: 227 AISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
P+L++ N G + + V++ G HT+ T+ GY +++WGR G LG G
Sbjct: 392 RHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGY-IYAWGRNYYGQLGLGDRRI 450
Query: 285 FFAPAIV---LWPPLTE 298
PA++ PPL++
Sbjct: 451 QRQPALLDPNAIPPLSQ 467
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 111 (44.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 58/216 (26%), Positives = 89/216 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
Q+ ++K G +L + N G L+ GN L G + + P V G + +
Sbjct: 1174 QVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGI--GRHMQMALQPMLVTALDGMNITML 1230
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
G H A V+ G+ Y WG GQLG G E+ P+++ F +
Sbjct: 1231 EAGQYHNAA-VADGKLYM--------WGWGIYGQLGQGSCENIATPQLVSFFKFKK---I 1278
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESM-C----WTFGLGENGQLGHGTTQSALVPEQVKEL 177
+++ G HT +L PN +E+ C + FG GQLG G + + L
Sbjct: 1279 LQISLGHAHTLVLCGA--PNSHMEANHCGNELFVFGSNHFGQLGTGNSDHG---DTKTNL 1333
Query: 178 PQYVYLVSVDCGL--FHTSVVSS-AGD----VWSWG 206
P V L DC L HT ++ A D +++WG
Sbjct: 1334 P--VRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWG 1367
Score = 70 (29.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAI-SPILISGNGPH 239
++ + GLFH ++SS+ +++WG +E LG T ++ A+ P I
Sbjct: 1503 ILQISSGLFHFCLISSSCTLYTWGKNLEHQLG-------TEDKDRRAVLKPSPIDS---- 1551
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT--GKTIDFFAPAIVLWP 294
+ P+ V CG+ T+++T D + + ++G +G G G +++ +V P
Sbjct: 1552 ---IERPMYVDCGSDFTLVMTTD-HVVRAFGGNSNGQCGRDLGPSVERMRQRVVCLP 1604
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 121 (47.7 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 102 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
R + L P++++ SP V +V CG HT +LT L +TFG + GQLG
Sbjct: 951 RVAPLAPQLLQ-LTSSSP--VVQVACGLHHTVVLT--------LAGEVYTFGSNQYGQLG 999
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASL 219
G Q P +V ++P + V+ G HT +++S G V+++G +KG LG P+
Sbjct: 1000 SGDLQPVSGPVRV-QVPGAISQVAA--GSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYG 1056
Query: 220 TRNEAGDAISPILISGNGPHG 240
+ D SP+ +G G
Sbjct: 1057 LKPPPQDDDSPVGAGSDGGAG 1077
Score = 62 (26.9 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
V KVA G H VAL + G+ + S+G NN GQ G
Sbjct: 752 VTKVALGKAHCVALNAKGQLF--------SFGLNNKGQCG 783
Score = 53 (23.7 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 340 QSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK---L 396
+SK ++ +R+ L+G I K AE I + ++D+ ++++W + ++A L
Sbjct: 4705 ESKRNLNQRW--FLNGVISTKQ--AESIISL-IRDLASGKLSEKWSQITKAAIAESVLNL 4759
Query: 397 VRLERFYRN 405
RLE YR+
Sbjct: 4760 TRLEEIYRS 4768
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT-GKTIDFFA 287
KF PV + A + + + G + S G V G G F+A
Sbjct: 2101 KFDHPVHIKENARYALRLCSQGARTCSGDAGMPAVRGPCGAQFHFYA 2147
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 109 (43.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V+CG H+ +L D+ +TFG G++GQLGHG S P V+ LP
Sbjct: 920 QVSCGFHHSVVLMEN---GDV-----YTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-- 969
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LG 212
V G HT+V+ G V+++G KG LG
Sbjct: 970 TQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 30/95 (31%), Positives = 42/95 (44%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+C+ G S+ I G L+M+G + S+ SLVS D GH V +VA
Sbjct: 617 VCTACNNGSSSV-ISKDGELYMFGKDAIYSDSS----SLVS--------DLKGHFVTQVA 663
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
G H L+ GE + ++G NN GQ G
Sbjct: 664 MGKAHTCVLMKNGEVW--------TFGVNNKGQCG 690
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
+F P + V +DG +W G G+ TID
Sbjct: 2329 RFASPTPKRPSENMLIRVNNDGTYCANWTPGAIGLYTVHVTID 2371
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 115 (45.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 51/175 (29%), Positives = 78/175 (44%)
Query: 111 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--TTQSA 168
+ F + P + + HTA+LT D ES + G G G+LG G +T+ +
Sbjct: 414 LPAFIKARPLKIQTLAMSKLHTAILT------DDPESNLFICGFGPGGRLGTGDESTRFS 467
Query: 169 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEA 224
V + L + SV G HT ++ GD++SWG K G GL P A N
Sbjct: 468 FVCIEGGGLANKK-VASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGL-PRA----NNK 521
Query: 225 GDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
D P+ +S P K + + A A H+V+ + G L+++G+ G LG
Sbjct: 522 DDV--PVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG--LYTFGKNE-GQLG 571
Score = 60 (26.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 41 SLVSSFTPSPVWDFHG-HTVVKVACGSEHVVA--LVSAGETYKGEDLVCYSWGANNNGQL 97
S ++S + P+ HG V+ + VA L G+++ +++G+N N L
Sbjct: 307 STITSRSLGPLVPDHGLDDASSVSSSDDEDVAEALEKPSTNLFGDEV--FTFGSNKNLNL 364
Query: 98 GLGDRESRLRPKII 111
G+GD++ R P+ I
Sbjct: 365 GVGDQDDRQYPERI 378
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 67/260 (25%), Positives = 107/260 (41%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVK 61
Q+ V G SL + + G ++ G D T G ++S TPS + D G TVV+
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGA--DGQTGLGHYNITS-TPSKLGGDLAGVTVVQ 284
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VA + +AL + G + WG N+ L L + +
Sbjct: 285 VATYGDCCLALSADGGVF--------GWG--NSEYLQLASVTDSTQVNVPRCLPFSGVGK 334
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKELPQY 180
V +V CG A+L N+ W +G LG+ L T ++P + L ++
Sbjct: 335 VKQVACGGTGCAIL------NEEGHVFVWGYGILGKGPNLSE-TALPEMIPPTLFGLTEF 387
Query: 181 ---VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 237
V + + CGL H + +++ G+++ WG K + C + R E D P ++ G
Sbjct: 388 NPEVKVSQIRCGLSHFAALTNKGELFVWG--KNIRGC--LGIGRLE--DQYFPWRVTMPG 441
Query: 238 PHGPKFQDPVQVACGAAHTV 257
+PV VACG H V
Sbjct: 442 -------EPVDVACGVDHMV 454
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 69/267 (25%), Positives = 110/267 (41%)
Query: 43 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLG- 100
V+ P+ ++ FH T K +V + SA T D +G N +GQLGL
Sbjct: 98 VTKVRPN-LYSFHRFTEEKY----RYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQ 152
Query: 101 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 160
D + +P II Q + + + G HT LT + G ++GQ
Sbjct: 153 DIKLAEKPTIIPALEQLN---IVQAAVGRHHTLFLTDT--------GTVYACGENKSGQC 201
Query: 161 GHGTTQSAL---VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP 215
G G T + + P + P ++ + CG + ++ G + ++G+ E G LG
Sbjct: 202 GVGNTHANIYSPTPINYRGPP----IIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNT 257
Query: 216 NAS--LTRNEAGDAI--SP---ILISGNGPHGPKFQ-DPVQV---ACGAAHTVLVTDDGY 264
+A + N+ SP +L G D VQ+ ACG HTV + D
Sbjct: 258 DAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAI-DSKK 316
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+++SWG G G LG + D P ++
Sbjct: 317 RVYSWGFGGFGRLGHAEPKDEMVPRLM 343
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 64/225 (28%), Positives = 89/225 (39%)
Query: 62 VACGSEHVVALVSAGE-----TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
V+C + + ++ G T GE VC G N GQLGL E L +
Sbjct: 25 VSCKCQDIKSIAGGGGHSAVITGAGELFVC---GHNKAGQLGLNHTEDVLCFTLCTAL-- 79
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVK 175
S + V EV CG T +L R +L C G GQLG L+P+++K
Sbjct: 80 -SGFCVQEVACGWDFTIILG---RAGLVLS--C---GSNAFGQLGVPQISGPCLIPQKIK 130
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 235
L + V + GL H + +G V+ WG G+ A R G + P+ +
Sbjct: 131 SLKEKA--VGIAAGLRHALAATESGLVFQWGT----GMASRAK--RVHQGKTL-PVFWAA 181
Query: 236 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVL 277
P K V QV+ A T L T L+ WG + G L
Sbjct: 182 KEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQL 226
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 108 (43.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
+V+CG H+ +L D+ +TFG G++GQLGHG S P V+ LP
Sbjct: 929 QVSCGFHHSVVLMEN---GDV-----YTFGYGQHGQLGHGDVNSRGSPTLVQALPGPS-- 978
Query: 184 VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LG 212
V G HT+V+ G V+++G KG LG
Sbjct: 979 TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 75 (31.5 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 39 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
G + S + V D GH V +VA G H L +GE + ++G NN GQ G
Sbjct: 654 GKDAIYSDSTCQVSDLKGHFVTQVAMGKAHTCVLTKSGEVW--------TFGVNNKGQCG 705
Score = 46 (21.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 311 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS-ILHGSIFGKPFAAE-QDI 368
D +++++ L A E D+ S A+ S +SV+ R A +LH + FA + +DI
Sbjct: 1875 DGDLQSQLLSKANEEDKNCSRAL-------SVVSVVVRAAKDLLH-----RAFAVDVEDI 1922
Query: 369 PISLKDMGFFDI 380
P L F +
Sbjct: 1923 PELLSSSSLFSM 1934
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 128 (50.1 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 42/117 (35%), Positives = 57/117 (48%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
V V+CG+FHT LL +R +TFG +GQLG G T S P+QV LP
Sbjct: 769 VSSVSCGNFHTVLLASDRR--------VFTFGSNCHGQLGVGDTLSKNTPQQVI-LPSDT 819
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+V V G HT + ++ G V+++G G A +AG P +SG GP
Sbjct: 820 VIVQVAAGSNHTILRANDGSVFTFG---AFGKGQLARPAGEKAGWNAIPEKVSGFGP 873
Score = 44 (20.5 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 98
+ +A G H VA+ G + +WG NN Q G
Sbjct: 615 ISSLALGKSHGVAVTRNGHLF--------TWGLNNMNQCG 646
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 434 434 0.00087 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 184
No. of states in DFA: 621 (66 KB)
Total size of DFA: 293 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.96u 0.10s 39.06t Elapsed: 00:00:02
Total cpu time: 39.07u 0.10s 39.17t Elapsed: 00:00:02
Start: Mon May 20 22:18:56 2013 End: Mon May 20 22:18:58 2013
WARNINGS ISSUED: 1