Query 013914
Match_columns 434
No_of_seqs 313 out of 3102
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 19:28:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013914.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013914hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 6.9E-57 2.4E-61 435.4 49.4 401 4-432 8-412 (415)
2 3ef6_A Toluene 1,2-dioxygenase 100.0 1.4E-56 4.9E-61 431.9 44.4 395 6-432 3-400 (410)
3 3fg2_P Putative rubredoxin red 100.0 7.7E-56 2.6E-60 426.3 47.4 397 5-431 1-400 (404)
4 4eqs_A Coenzyme A disulfide re 100.0 2.8E-56 9.5E-61 432.3 39.0 401 6-432 1-424 (437)
5 1q1r_A Putidaredoxin reductase 100.0 1.8E-54 6.1E-59 419.5 44.4 400 4-431 3-409 (431)
6 2gqw_A Ferredoxin reductase; f 100.0 2.9E-54 1E-58 415.2 43.3 392 4-431 6-400 (408)
7 3klj_A NAD(FAD)-dependent dehy 100.0 2E-54 7E-59 411.8 34.0 363 4-420 8-375 (385)
8 3oc4_A Oxidoreductase, pyridin 100.0 9.1E-54 3.1E-58 417.7 38.3 404 6-433 3-427 (452)
9 3iwa_A FAD-dependent pyridine 100.0 1.2E-53 4.1E-58 419.4 36.8 413 5-432 3-445 (472)
10 3kd9_A Coenzyme A disulfide re 100.0 2.5E-53 8.7E-58 414.4 37.2 405 5-432 3-428 (449)
11 2bc0_A NADH oxidase; flavoprot 100.0 1.8E-53 6.3E-58 419.3 35.2 409 5-433 35-477 (490)
12 2cdu_A NADPH oxidase; flavoenz 100.0 2.2E-53 7.5E-58 415.2 34.1 406 6-433 1-432 (452)
13 3ntd_A FAD-dependent pyridine 100.0 5.9E-52 2E-56 416.9 39.7 398 6-424 2-443 (565)
14 3ics_A Coenzyme A-disulfide re 100.0 3.6E-51 1.2E-55 412.4 41.7 405 4-430 35-466 (588)
15 1nhp_A NADH peroxidase; oxidor 100.0 4.8E-52 1.6E-56 405.2 34.1 404 6-433 1-431 (447)
16 3cgb_A Pyridine nucleotide-dis 100.0 1.4E-50 4.9E-55 397.7 41.4 404 5-433 36-468 (480)
17 1xhc_A NADH oxidase /nitrite r 100.0 4.1E-50 1.4E-54 380.4 33.0 352 6-411 9-362 (367)
18 2v3a_A Rubredoxin reductase; a 100.0 2.4E-49 8.2E-54 378.7 36.9 366 3-404 2-372 (384)
19 1m6i_A Programmed cell death p 100.0 1.7E-49 5.7E-54 390.6 34.8 405 3-423 9-484 (493)
20 1mo9_A ORF3; nucleotide bindin 100.0 2.4E-49 8.3E-54 392.6 29.2 399 3-432 41-508 (523)
21 2hqm_A GR, grase, glutathione 100.0 9.7E-50 3.3E-54 391.7 24.1 400 4-433 10-466 (479)
22 4b1b_A TRXR, thioredoxin reduc 100.0 1.3E-50 4.6E-55 398.5 16.9 395 5-433 42-516 (542)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 3.6E-48 1.2E-52 380.6 33.2 398 4-432 5-457 (474)
24 3l8k_A Dihydrolipoyl dehydroge 100.0 8.9E-49 3.1E-53 383.7 27.9 398 3-432 2-448 (466)
25 2wpf_A Trypanothione reductase 100.0 1.4E-49 4.8E-54 391.4 22.1 396 3-433 5-470 (495)
26 3urh_A Dihydrolipoyl dehydroge 100.0 4.7E-49 1.6E-53 388.5 25.7 398 3-432 23-475 (491)
27 3dk9_A Grase, GR, glutathione 100.0 8.1E-49 2.8E-53 385.7 26.7 402 3-433 18-473 (478)
28 2qae_A Lipoamide, dihydrolipoy 100.0 1.1E-47 3.9E-52 376.5 34.3 395 5-432 2-452 (468)
29 1ojt_A Surface protein; redox- 100.0 2.8E-48 9.6E-53 381.8 29.5 395 2-432 3-461 (482)
30 3lad_A Dihydrolipoamide dehydr 100.0 6.5E-49 2.2E-53 386.3 24.2 396 4-432 2-455 (476)
31 4dna_A Probable glutathione re 100.0 7.8E-48 2.7E-52 377.0 31.4 397 1-433 1-445 (463)
32 1ges_A Glutathione reductase; 100.0 2.6E-47 9E-52 371.5 34.9 396 3-433 2-445 (450)
33 1xdi_A RV3303C-LPDA; reductase 100.0 9.2E-48 3.2E-52 379.8 32.1 396 5-432 2-455 (499)
34 1zk7_A HGII, reductase, mercur 100.0 4.2E-48 1.4E-52 379.4 29.4 395 2-431 1-445 (467)
35 2a8x_A Dihydrolipoyl dehydroge 100.0 1.4E-47 4.8E-52 375.4 31.2 395 5-432 3-448 (464)
36 1dxl_A Dihydrolipoamide dehydr 100.0 1.8E-47 6E-52 375.7 31.5 397 3-432 4-454 (470)
37 1fec_A Trypanothione reductase 100.0 1.4E-48 4.6E-53 384.2 23.0 395 4-433 2-466 (490)
38 3o0h_A Glutathione reductase; 100.0 7.5E-48 2.6E-52 379.0 28.2 394 4-433 25-465 (484)
39 1v59_A Dihydrolipoamide dehydr 100.0 9.6E-48 3.3E-52 378.2 28.3 398 2-432 2-462 (478)
40 1ebd_A E3BD, dihydrolipoamide 100.0 4.8E-47 1.6E-51 370.7 32.8 394 5-432 3-445 (455)
41 2r9z_A Glutathione amide reduc 100.0 1.2E-46 4.2E-51 367.9 35.4 395 3-433 2-443 (463)
42 2eq6_A Pyruvate dehydrogenase 100.0 5.5E-47 1.9E-51 370.7 32.1 391 5-432 6-445 (464)
43 1onf_A GR, grase, glutathione 100.0 3.3E-46 1.1E-50 368.3 34.4 402 5-432 2-490 (500)
44 3ic9_A Dihydrolipoamide dehydr 100.0 9.4E-48 3.2E-52 378.3 22.2 398 1-432 4-457 (492)
45 3qfa_A Thioredoxin reductase 1 100.0 2.9E-47 1E-51 377.0 25.3 399 4-433 31-498 (519)
46 3dgh_A TRXR-1, thioredoxin red 100.0 4.2E-47 1.4E-51 373.8 26.2 398 4-433 8-470 (483)
47 2yqu_A 2-oxoglutarate dehydrog 100.0 8.7E-46 3E-50 361.8 31.3 392 5-432 1-439 (455)
48 3dgz_A Thioredoxin reductase 2 100.0 1.5E-46 5E-51 370.2 25.4 398 4-432 5-469 (488)
49 1lvl_A Dihydrolipoamide dehydr 100.0 7E-45 2.4E-49 355.2 31.2 389 4-432 4-442 (458)
50 2x8g_A Thioredoxin glutathione 100.0 2.3E-44 8E-49 363.2 27.4 396 4-433 106-577 (598)
51 4gcm_A TRXR, thioredoxin reduc 100.0 8.6E-41 2.9E-45 310.8 26.7 298 1-332 2-304 (312)
52 4g6h_A Rotenone-insensitive NA 100.0 3.5E-41 1.2E-45 330.9 22.9 297 5-332 42-399 (502)
53 2zbw_A Thioredoxin reductase; 100.0 1.1E-39 3.8E-44 306.4 26.0 303 1-336 1-319 (335)
54 4a5l_A Thioredoxin reductase; 100.0 7.4E-40 2.5E-44 304.8 19.5 297 2-332 1-310 (314)
55 1trb_A Thioredoxin reductase; 100.0 2.9E-39 1E-43 301.6 22.3 299 1-335 1-315 (320)
56 3ab1_A Ferredoxin--NADP reduct 100.0 1.6E-38 5.5E-43 301.5 24.9 304 3-335 12-329 (360)
57 2q7v_A Thioredoxin reductase; 100.0 4E-38 1.4E-42 294.5 25.7 292 4-335 7-313 (325)
58 3cty_A Thioredoxin reductase; 100.0 3.4E-38 1.2E-42 294.2 24.8 291 4-335 15-317 (319)
59 1fl2_A Alkyl hydroperoxide red 100.0 2.9E-38 1E-42 293.5 23.7 293 5-334 1-305 (310)
60 3f8d_A Thioredoxin reductase ( 100.0 3.6E-38 1.2E-42 294.5 22.9 290 5-333 15-316 (323)
61 3r9u_A Thioredoxin reductase; 100.0 6.7E-38 2.3E-42 291.6 24.3 290 3-333 2-311 (315)
62 3vrd_B FCCB subunit, flavocyto 100.0 1.3E-38 4.5E-43 306.4 20.0 318 6-348 3-338 (401)
63 2q0l_A TRXR, thioredoxin reduc 100.0 4.8E-38 1.6E-42 292.2 22.8 288 6-333 2-308 (311)
64 3lzw_A Ferredoxin--NADP reduct 100.0 1.3E-38 4.5E-43 298.7 18.9 299 1-335 1-316 (332)
65 3itj_A Thioredoxin reductase 1 100.0 2E-38 6.7E-43 298.3 19.8 299 4-335 21-336 (338)
66 4fk1_A Putative thioredoxin re 100.0 4.4E-38 1.5E-42 291.3 19.4 284 2-333 3-299 (304)
67 3sx6_A Sulfide-quinone reducta 100.0 2.2E-37 7.4E-42 300.7 25.1 316 3-340 2-350 (437)
68 3hyw_A Sulfide-quinone reducta 100.0 7.8E-39 2.7E-43 309.9 14.3 309 6-337 3-336 (430)
69 3h8l_A NADH oxidase; membrane 100.0 8.2E-37 2.8E-41 294.5 25.5 291 6-333 2-335 (409)
70 1vdc_A NTR, NADPH dependent th 100.0 3E-37 1E-41 289.6 21.2 300 3-334 6-323 (333)
71 3fbs_A Oxidoreductase; structu 100.0 1.9E-37 6.5E-42 286.1 18.5 283 5-334 2-292 (297)
72 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.9E-36 6.7E-41 299.5 25.4 293 4-333 211-515 (521)
73 2a87_A TRXR, TR, thioredoxin r 100.0 7.6E-37 2.6E-41 287.0 21.2 292 3-334 12-316 (335)
74 4a9w_A Monooxygenase; baeyer-v 100.0 1.6E-35 5.4E-40 280.5 18.1 301 4-335 2-353 (357)
75 3h28_A Sulfide-quinone reducta 100.0 4.3E-35 1.5E-39 284.0 19.6 304 6-337 3-336 (430)
76 3d1c_A Flavin-containing putat 100.0 3.8E-34 1.3E-38 272.4 23.8 303 4-333 3-338 (369)
77 2vdc_G Glutamate synthase [NAD 100.0 2.9E-34 9.8E-39 278.2 16.2 287 4-335 121-445 (456)
78 1gte_A Dihydropyrimidine dehyd 100.0 3.2E-33 1.1E-37 295.9 20.4 317 5-361 187-540 (1025)
79 1cjc_A Protein (adrenodoxin re 100.0 2.8E-33 9.7E-38 272.0 13.5 291 4-333 5-394 (460)
80 2gag_A Heterotetrameric sarcos 100.0 1.3E-32 4.6E-37 289.3 19.5 284 5-333 128-443 (965)
81 1lqt_A FPRA; NADP+ derivative, 100.0 4.3E-33 1.5E-37 270.4 11.2 287 4-333 2-386 (456)
82 3s5w_A L-ornithine 5-monooxyge 100.0 6.2E-32 2.1E-36 264.8 18.0 313 5-332 30-447 (463)
83 2xve_A Flavin-containing monoo 100.0 4.3E-31 1.5E-35 257.7 21.8 285 6-333 3-340 (464)
84 1y56_A Hypothetical protein PH 100.0 1.4E-31 4.8E-36 263.1 14.8 257 4-333 107-376 (493)
85 1o94_A Tmadh, trimethylamine d 100.0 5E-32 1.7E-36 277.7 9.5 298 5-360 389-719 (729)
86 3k30_A Histamine dehydrogenase 100.0 5.1E-32 1.7E-36 276.7 8.8 284 4-343 390-684 (690)
87 2gv8_A Monooxygenase; FMO, FAD 100.0 1.1E-29 3.7E-34 247.4 20.6 287 3-333 4-361 (447)
88 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.3E-29 4.3E-34 258.4 12.1 260 4-329 372-671 (671)
89 3gwf_A Cyclohexanone monooxyge 100.0 1.1E-28 3.6E-33 244.2 13.9 297 5-331 8-454 (540)
90 4ap3_A Steroid monooxygenase; 99.9 1.2E-26 4E-31 230.0 15.4 182 4-198 20-226 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 4.9E-27 1.7E-31 232.5 12.3 191 4-198 8-220 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 3.1E-25 1.1E-29 220.7 16.2 295 4-332 15-464 (542)
93 2ywl_A Thioredoxin reductase r 99.9 2.9E-23 9.8E-28 176.4 16.7 158 165-336 3-173 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 6.4E-19 2.2E-23 173.2 23.9 288 5-299 39-458 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 4E-20 1.4E-24 180.3 -1.9 220 82-331 129-370 (472)
96 2cul_A Glucose-inhibited divis 99.6 1E-15 3.6E-20 134.9 12.5 156 164-332 4-230 (232)
97 2gqf_A Hypothetical protein HI 99.6 1.3E-16 4.4E-21 152.1 2.3 121 1-127 1-169 (401)
98 3fpz_A Thiazole biosynthetic e 99.6 5.4E-18 1.8E-22 157.8 -8.9 254 5-332 65-323 (326)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.4 3E-13 1E-17 130.7 5.5 94 204-300 203-307 (431)
100 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.1E-11 3.8E-16 122.7 15.1 158 4-193 27-220 (651)
101 1rp0_A ARA6, thiazole biosynth 99.3 5E-12 1.7E-16 114.8 9.8 168 163-334 39-275 (284)
102 2zxi_A TRNA uridine 5-carboxym 99.3 8E-11 2.7E-15 116.2 15.2 158 4-193 26-219 (637)
103 3dme_A Conserved exported prot 99.2 9.7E-11 3.3E-15 110.5 15.3 58 204-262 149-208 (369)
104 3oz2_A Digeranylgeranylglycero 99.2 2.8E-10 9.7E-15 108.3 18.6 38 3-43 2-39 (397)
105 2ywl_A Thioredoxin reductase r 99.2 2.5E-11 8.6E-16 102.3 7.2 110 6-130 2-114 (180)
106 1kf6_A Fumarate reductase flav 99.2 3.4E-11 1.2E-15 120.5 7.3 39 1-42 1-41 (602)
107 3v76_A Flavoprotein; structura 99.1 7.3E-11 2.5E-15 112.8 6.9 122 1-126 23-187 (417)
108 1y56_B Sarcosine oxidase; dehy 99.1 1.3E-09 4.5E-14 103.3 14.6 58 204-263 148-205 (382)
109 4dgk_A Phytoene dehydrogenase; 99.1 3.9E-10 1.3E-14 111.1 11.0 56 205-261 221-276 (501)
110 3dje_A Fructosyl amine: oxygen 99.1 2.3E-09 8E-14 103.6 15.4 58 204-262 160-220 (438)
111 3nix_A Flavoprotein/dehydrogen 99.0 2.4E-09 8.4E-14 102.9 14.3 59 205-263 106-166 (421)
112 2bry_A NEDD9 interacting prote 99.0 4.6E-11 1.6E-15 117.1 1.9 150 114-266 37-233 (497)
113 2cul_A Glucose-inhibited divis 99.0 5.6E-10 1.9E-14 98.1 7.7 115 5-127 3-126 (232)
114 2i0z_A NAD(FAD)-utilizing dehy 98.9 6.8E-09 2.3E-13 100.5 12.7 59 204-263 133-191 (447)
115 3pvc_A TRNA 5-methylaminomethy 98.9 2.6E-08 8.8E-13 101.7 17.6 57 204-262 411-468 (689)
116 2gag_B Heterotetrameric sarcos 98.9 4.7E-08 1.6E-12 93.3 18.4 58 204-263 173-230 (405)
117 2e4g_A Tryptophan halogenase; 98.9 1.3E-08 4.5E-13 101.1 14.7 60 205-265 194-254 (550)
118 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.1E-09 7.3E-14 101.8 8.6 120 4-129 10-163 (379)
119 3axb_A Putative oxidoreductase 98.9 5E-09 1.7E-13 101.5 10.8 58 204-262 180-253 (448)
120 2x3n_A Probable FAD-dependent 98.9 2.2E-09 7.5E-14 102.5 8.1 125 1-128 1-168 (399)
121 1s3e_A Amine oxidase [flavin-c 98.9 1.7E-09 5.8E-14 107.0 7.5 52 209-262 216-267 (520)
122 3cgv_A Geranylgeranyl reductas 98.9 1.6E-08 5.5E-13 96.2 14.1 58 205-263 102-162 (397)
123 3gyx_A Adenylylsulfate reducta 98.9 4.4E-10 1.5E-14 113.2 3.0 35 5-42 22-62 (662)
124 2vou_A 2,6-dihydroxypyridine h 98.9 3.3E-09 1.1E-13 101.1 7.7 124 1-127 1-154 (397)
125 2gf3_A MSOX, monomeric sarcosi 98.9 4.3E-08 1.5E-12 93.0 15.4 71 187-263 135-205 (389)
126 3ps9_A TRNA 5-methylaminomethy 98.9 1.1E-07 3.7E-12 97.0 19.2 57 204-262 416-472 (676)
127 3nrn_A Uncharacterized protein 98.9 6.4E-09 2.2E-13 99.9 9.5 61 204-268 188-248 (421)
128 3ihg_A RDME; flavoenzyme, anth 98.9 5.7E-09 2E-13 103.5 9.4 39 1-42 1-39 (535)
129 3pl8_A Pyranose 2-oxidase; sub 98.8 1E-11 3.6E-16 124.6 -11.0 54 216-269 271-330 (623)
130 3cp8_A TRNA uridine 5-carboxym 98.8 1.5E-09 5.1E-14 107.6 4.2 158 4-192 20-213 (641)
131 3nlc_A Uncharacterized protein 98.8 8.9E-09 3.1E-13 101.2 8.8 120 5-127 107-278 (549)
132 3e1t_A Halogenase; flavoprotei 98.8 1.1E-08 3.7E-13 100.8 9.4 124 4-130 6-176 (512)
133 3nyc_A D-arginine dehydrogenas 98.8 1.6E-08 5.3E-13 95.7 10.1 56 204-262 153-208 (381)
134 1rp0_A ARA6, thiazole biosynth 98.8 8.4E-09 2.9E-13 93.4 7.6 121 4-128 38-193 (284)
135 3atr_A Conserved archaeal prot 98.8 2.1E-09 7.2E-14 104.3 3.8 127 1-130 2-166 (453)
136 4a9w_A Monooxygenase; baeyer-v 98.8 5.4E-08 1.9E-12 91.0 13.4 95 164-261 4-130 (357)
137 3fmw_A Oxygenase; mithramycin, 98.8 1.3E-08 4.5E-13 101.2 9.0 121 5-128 49-209 (570)
138 3i3l_A Alkylhalidase CMLS; fla 98.7 1.5E-08 5E-13 101.1 8.5 121 3-127 21-189 (591)
139 3nlc_A Uncharacterized protein 98.7 9.9E-08 3.4E-12 93.8 14.0 102 163-265 107-279 (549)
140 2oln_A NIKD protein; flavoprot 98.7 1.2E-07 3.9E-12 90.4 14.2 56 204-262 152-207 (397)
141 2bry_A NEDD9 interacting prote 98.7 1.4E-08 4.9E-13 99.4 7.6 123 4-129 91-233 (497)
142 2aqj_A Tryptophan halogenase, 98.7 1.3E-07 4.6E-12 93.7 14.4 61 204-265 164-224 (538)
143 1pj5_A N,N-dimethylglycine oxi 98.7 1.1E-07 3.7E-12 99.3 14.3 58 204-263 150-207 (830)
144 2xdo_A TETX2 protein; tetracyc 98.7 8E-08 2.7E-12 91.5 12.0 125 3-130 24-186 (398)
145 2pyx_A Tryptophan halogenase; 98.7 6.1E-08 2.1E-12 95.8 11.4 60 205-265 175-235 (526)
146 3ka7_A Oxidoreductase; structu 98.7 3.9E-08 1.3E-12 94.5 9.7 59 204-264 195-253 (425)
147 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 4.6E-08 1.6E-12 91.2 9.5 116 6-124 2-163 (342)
148 1yvv_A Amine oxidase, flavin-c 98.7 6.8E-08 2.3E-12 89.7 10.4 35 5-42 2-36 (336)
149 1ryi_A Glycine oxidase; flavop 98.7 4.4E-08 1.5E-12 92.7 8.6 36 4-42 16-51 (382)
150 4at0_A 3-ketosteroid-delta4-5a 98.6 7.5E-08 2.6E-12 94.8 10.0 57 206-262 203-263 (510)
151 3gwf_A Cyclohexanone monooxyge 98.6 2.1E-07 7.1E-12 91.9 13.0 102 164-265 9-151 (540)
152 2qa1_A PGAE, polyketide oxygen 98.6 5.1E-08 1.7E-12 95.5 8.4 121 3-127 9-166 (500)
153 4ap3_A Steroid monooxygenase; 98.6 2.1E-07 7.2E-12 92.1 12.8 103 163-265 21-163 (549)
154 3da1_A Glycerol-3-phosphate de 98.6 1.7E-07 5.7E-12 93.2 12.1 58 204-262 169-231 (561)
155 3lzw_A Ferredoxin--NADP reduct 98.6 1E-07 3.5E-12 88.2 9.9 101 164-266 8-129 (332)
156 3itj_A Thioredoxin reductase 1 98.6 1.1E-07 3.6E-12 88.3 10.0 101 163-266 22-145 (338)
157 3p1w_A Rabgdi protein; GDI RAB 98.6 3E-09 1E-13 102.3 -0.7 59 204-262 255-313 (475)
158 3f8d_A Thioredoxin reductase ( 98.6 1.9E-07 6.6E-12 85.9 11.4 100 164-266 16-128 (323)
159 3v76_A Flavoprotein; structura 98.6 1.7E-07 5.9E-12 89.4 11.1 98 163-263 27-187 (417)
160 1y0p_A Fumarate reductase flav 98.6 6.5E-08 2.2E-12 96.6 8.1 36 5-43 126-161 (571)
161 2zbw_A Thioredoxin reductase; 98.6 2.7E-07 9.2E-12 85.6 11.8 97 164-262 6-120 (335)
162 3ab1_A Ferredoxin--NADP reduct 98.6 4.2E-07 1.4E-11 85.2 12.8 99 163-262 14-130 (360)
163 1qo8_A Flavocytochrome C3 fuma 98.6 6E-08 2.1E-12 96.7 7.4 36 5-43 121-156 (566)
164 2qa2_A CABE, polyketide oxygen 98.6 1.5E-07 5.1E-12 92.2 9.8 121 4-127 11-167 (499)
165 2xve_A Flavin-containing monoo 98.6 5.3E-07 1.8E-11 87.5 13.5 103 164-266 3-171 (464)
166 3klj_A NAD(FAD)-dependent dehy 98.6 7.2E-08 2.5E-12 91.2 7.1 101 162-266 8-119 (385)
167 2q0l_A TRXR, thioredoxin reduc 98.6 4.5E-07 1.5E-11 83.1 12.2 98 165-265 3-116 (311)
168 3rp8_A Flavoprotein monooxygen 98.6 8.1E-08 2.8E-12 91.8 7.4 122 4-128 22-183 (407)
169 3alj_A 2-methyl-3-hydroxypyrid 98.6 4.9E-07 1.7E-11 85.5 12.6 98 163-265 11-162 (379)
170 3sx6_A Sulfide-quinone reducta 98.6 1.1E-07 3.8E-12 91.6 8.3 100 164-268 5-117 (437)
171 3fbs_A Oxidoreductase; structu 98.6 3.8E-07 1.3E-11 82.8 11.4 100 164-266 3-115 (297)
172 1fl2_A Alkyl hydroperoxide red 98.6 3.7E-07 1.3E-11 83.7 11.4 101 165-265 3-117 (310)
173 1k0i_A P-hydroxybenzoate hydro 98.5 1.7E-07 6E-12 89.0 8.6 123 5-130 2-167 (394)
174 2gqf_A Hypothetical protein HI 98.5 7.2E-07 2.5E-11 84.7 12.6 99 164-264 5-169 (401)
175 3uox_A Otemo; baeyer-villiger 98.5 6.2E-07 2.1E-11 88.6 12.5 102 164-265 10-151 (545)
176 2weu_A Tryptophan 5-halogenase 98.5 1.2E-06 4.2E-11 86.2 14.7 60 204-264 172-231 (511)
177 1hyu_A AHPF, alkyl hydroperoxi 98.5 1.7E-06 5.8E-11 85.2 15.5 104 162-265 211-328 (521)
178 2uzz_A N-methyl-L-tryptophan o 98.5 2.1E-07 7.2E-12 87.7 8.6 35 5-42 2-36 (372)
179 2wdq_A Succinate dehydrogenase 98.5 7.2E-07 2.5E-11 89.0 12.5 58 204-261 142-204 (588)
180 1vdc_A NTR, NADPH dependent th 98.5 4.4E-07 1.5E-11 84.0 10.2 98 164-265 9-126 (333)
181 2gmh_A Electron transfer flavo 98.5 4E-07 1.4E-11 90.9 10.5 36 5-43 35-76 (584)
182 2q7v_A Thioredoxin reductase; 98.5 7.3E-07 2.5E-11 82.3 11.5 101 164-265 9-125 (325)
183 4fk1_A Putative thioredoxin re 98.5 9.2E-07 3.2E-11 80.8 11.9 100 165-265 8-119 (304)
184 3d1c_A Flavin-containing putat 98.5 1.6E-06 5.6E-11 81.4 13.8 98 164-264 5-144 (369)
185 3kkj_A Amine oxidase, flavin-c 98.5 1.2E-07 4.1E-12 85.3 5.8 36 5-43 2-37 (336)
186 1chu_A Protein (L-aspartate ox 98.5 5.2E-07 1.8E-11 89.1 10.6 56 275-332 353-409 (540)
187 2yqu_A 2-oxoglutarate dehydrog 98.5 2.8E-07 9.4E-12 89.4 8.4 99 5-129 167-267 (455)
188 3hyw_A Sulfide-quinone reducta 98.5 7.2E-08 2.5E-12 92.8 3.9 96 164-264 3-110 (430)
189 4hb9_A Similarities with proba 98.4 2.3E-07 7.8E-12 88.6 7.2 35 6-43 2-36 (412)
190 2qcu_A Aerobic glycerol-3-phos 98.4 7.2E-07 2.5E-11 87.5 10.8 36 4-42 2-37 (501)
191 1y0p_A Fumarate reductase flav 98.4 1.9E-06 6.3E-11 86.0 13.8 100 163-262 126-316 (571)
192 3c4n_A Uncharacterized protein 98.4 5.8E-08 2E-12 92.7 2.7 35 5-42 36-72 (405)
193 2bs2_A Quinol-fumarate reducta 98.4 3E-07 1E-11 92.6 7.9 39 1-42 1-39 (660)
194 1qo8_A Flavocytochrome C3 fuma 98.4 1.3E-06 4.4E-11 87.1 12.1 99 164-262 122-311 (566)
195 3jsk_A Cypbp37 protein; octame 98.4 2.7E-07 9.2E-12 84.6 6.5 36 5-43 79-116 (344)
196 1xhc_A NADH oxidase /nitrite r 98.4 2.5E-07 8.7E-12 86.9 6.4 99 162-266 7-116 (367)
197 1trb_A Thioredoxin reductase; 98.4 1.2E-06 4.2E-11 80.5 10.7 98 164-265 6-118 (320)
198 3c96_A Flavin-containing monoo 98.4 2.2E-07 7.6E-12 88.8 5.9 39 1-42 1-39 (410)
199 2gv8_A Monooxygenase; FMO, FAD 98.4 1.4E-06 4.8E-11 84.2 11.4 101 163-265 6-181 (447)
200 3cty_A Thioredoxin reductase; 98.4 2E-06 6.8E-11 79.1 11.9 98 164-265 17-128 (319)
201 2x3n_A Probable FAD-dependent 98.4 1.5E-06 5E-11 82.8 11.2 101 164-265 7-168 (399)
202 2gqw_A Ferredoxin reductase; f 98.4 5.5E-07 1.9E-11 85.9 8.2 97 5-128 145-241 (408)
203 3fg2_P Putative rubredoxin red 98.4 5E-07 1.7E-11 86.2 7.9 97 164-265 2-112 (404)
204 3h28_A Sulfide-quinone reducta 98.4 1.9E-07 6.6E-12 89.8 5.1 98 164-266 3-112 (430)
205 3h8l_A NADH oxidase; membrane 98.4 2.3E-07 8E-12 88.6 5.5 98 164-266 2-116 (409)
206 3vrd_B FCCB subunit, flavocyto 98.4 8.8E-07 3E-11 84.4 9.5 101 163-268 2-113 (401)
207 2a87_A TRXR, TR, thioredoxin r 98.4 1.2E-06 4.1E-11 81.2 10.0 99 163-265 14-128 (335)
208 1q1r_A Putidaredoxin reductase 98.4 1E-06 3.6E-11 84.6 9.8 101 163-267 4-118 (431)
209 1nhp_A NADH peroxidase; oxidor 98.4 9.5E-07 3.2E-11 85.4 9.3 100 4-129 148-249 (447)
210 2v3a_A Rubredoxin reductase; a 98.4 5.6E-07 1.9E-11 85.2 7.5 99 5-128 145-245 (384)
211 1ges_A Glutathione reductase; 98.4 9.7E-07 3.3E-11 85.4 9.1 99 5-129 167-268 (450)
212 1d4d_A Flavocytochrome C fumar 98.4 7.8E-07 2.7E-11 88.6 8.6 36 5-43 126-161 (572)
213 3ef6_A Toluene 1,2-dioxygenase 98.4 1.5E-06 5.1E-11 83.0 10.3 99 164-266 3-114 (410)
214 1lvl_A Dihydrolipoamide dehydr 98.4 6.6E-07 2.2E-11 86.8 7.8 97 5-129 171-271 (458)
215 4a5l_A Thioredoxin reductase; 98.3 2.4E-06 8.3E-11 78.2 11.1 98 165-265 6-123 (314)
216 2eq6_A Pyruvate dehydrogenase 98.3 9.7E-07 3.3E-11 85.7 8.7 99 5-129 169-274 (464)
217 1yvv_A Amine oxidase, flavin-c 98.3 5.4E-06 1.8E-10 76.7 13.4 97 164-262 3-161 (336)
218 2vou_A 2,6-dihydroxypyridine h 98.3 2.7E-06 9.4E-11 80.8 11.6 101 163-265 5-155 (397)
219 2r0c_A REBC; flavin adenine di 98.3 9E-07 3.1E-11 87.8 8.1 35 5-42 26-60 (549)
220 2r9z_A Glutathione amide reduc 98.3 1.3E-06 4.3E-11 84.9 8.7 99 5-129 166-267 (463)
221 3lxd_A FAD-dependent pyridine 98.3 1.4E-06 4.8E-11 83.3 8.7 99 5-128 152-253 (415)
222 3kd9_A Coenzyme A disulfide re 98.3 1.5E-06 5.3E-11 84.0 9.0 100 163-266 3-117 (449)
223 1ebd_A E3BD, dihydrolipoamide 98.3 1E-06 3.6E-11 85.3 7.8 99 5-129 170-273 (455)
224 2gjc_A Thiazole biosynthetic e 98.3 2.6E-06 8.8E-11 77.6 9.8 36 5-43 65-102 (326)
225 3oc4_A Oxidoreductase, pyridin 98.3 1.6E-06 5.5E-11 83.9 9.0 101 164-266 3-118 (452)
226 3ces_A MNMG, tRNA uridine 5-ca 98.3 5.8E-06 2E-10 82.1 13.0 99 164-264 29-182 (651)
227 2dkh_A 3-hydroxybenzoate hydro 98.3 6.9E-07 2.4E-11 90.3 6.5 36 4-42 31-67 (639)
228 2h88_A Succinate dehydrogenase 98.3 7.9E-07 2.7E-11 88.9 6.8 35 5-42 18-52 (621)
229 3r9u_A Thioredoxin reductase; 98.3 3.5E-06 1.2E-10 77.1 10.7 100 163-266 4-121 (315)
230 3ics_A Coenzyme A-disulfide re 98.3 1.7E-06 5.9E-11 86.6 9.0 103 162-266 35-155 (588)
231 4eqs_A Coenzyme A disulfide re 98.3 2.2E-06 7.5E-11 82.5 9.4 96 5-128 147-242 (437)
232 2zxi_A TRNA uridine 5-carboxym 98.3 7E-06 2.4E-10 81.2 13.0 99 164-264 28-181 (637)
233 1w4x_A Phenylacetone monooxyge 98.3 7.3E-06 2.5E-10 81.1 13.0 98 164-261 17-152 (542)
234 1k0i_A P-hydroxybenzoate hydro 98.2 5.2E-06 1.8E-10 78.8 11.2 101 164-265 3-165 (394)
235 2hqm_A GR, grase, glutathione 98.2 2.3E-06 8E-11 83.4 8.8 98 5-128 185-287 (479)
236 1c0p_A D-amino acid oxidase; a 98.2 8.7E-07 3E-11 83.1 5.6 39 1-42 2-40 (363)
237 4hb9_A Similarities with proba 98.2 9.8E-06 3.4E-10 77.1 13.0 100 164-264 2-167 (412)
238 1onf_A GR, grase, glutathione 98.2 3.3E-06 1.1E-10 82.7 9.9 98 5-128 176-277 (500)
239 3s5w_A L-ornithine 5-monooxyge 98.2 2.3E-06 8E-11 83.1 8.7 102 165-266 32-195 (463)
240 1ryi_A Glycine oxidase; flavop 98.2 6.6E-06 2.3E-10 77.6 11.5 55 206-263 165-219 (382)
241 3atr_A Conserved archaeal prot 98.2 7E-06 2.4E-10 79.4 11.8 101 164-265 7-164 (453)
242 3iwa_A FAD-dependent pyridine 98.2 2.8E-06 9.6E-11 82.7 9.0 102 163-266 3-128 (472)
243 1fec_A Trypanothione reductase 98.2 3.3E-06 1.1E-10 82.5 9.1 98 5-128 187-290 (490)
244 2wpf_A Trypanothione reductase 98.2 3.4E-06 1.2E-10 82.5 9.2 99 5-129 191-295 (495)
245 1v59_A Dihydrolipoamide dehydr 98.2 2.6E-06 8.8E-11 83.1 8.3 99 5-129 183-290 (478)
246 2gmh_A Electron transfer flavo 98.2 1.9E-05 6.5E-10 78.8 14.2 101 164-264 36-218 (584)
247 1mo9_A ORF3; nucleotide bindin 98.2 3.8E-06 1.3E-10 82.8 9.0 98 6-129 215-319 (523)
248 3i3l_A Alkylhalidase CMLS; fla 98.2 1.5E-05 5.1E-10 79.4 13.3 100 163-263 23-188 (591)
249 1ojt_A Surface protein; redox- 98.2 2.2E-06 7.6E-11 83.6 7.2 98 5-128 185-288 (482)
250 4gcm_A TRXR, thioredoxin reduc 98.2 1.1E-05 3.8E-10 73.8 11.5 98 165-266 8-119 (312)
251 2a8x_A Dihydrolipoyl dehydroge 98.2 3.6E-06 1.2E-10 81.7 8.6 99 5-129 171-274 (464)
252 2bc0_A NADH oxidase; flavoprot 98.2 4.6E-06 1.6E-10 81.5 9.3 99 5-129 194-294 (490)
253 1zmd_A Dihydrolipoyl dehydroge 98.2 4.3E-06 1.5E-10 81.5 9.0 100 5-129 178-285 (474)
254 4b1b_A TRXR, thioredoxin reduc 98.2 4.5E-06 1.6E-10 82.1 8.9 98 5-129 223-322 (542)
255 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 9.5E-06 3.2E-10 75.3 10.7 94 165-260 3-162 (342)
256 1xdi_A RV3303C-LPDA; reductase 98.2 5.9E-06 2E-10 81.0 9.7 98 5-128 182-281 (499)
257 3ntd_A FAD-dependent pyridine 98.1 3.9E-06 1.3E-10 83.6 8.2 101 164-266 2-120 (565)
258 1d4d_A Flavocytochrome C fumar 98.1 1.8E-05 6E-10 78.9 12.9 101 163-263 126-317 (572)
259 2gjc_A Thiazole biosynthetic e 98.1 3.2E-05 1.1E-09 70.4 13.3 166 163-332 65-323 (326)
260 3cp8_A TRNA uridine 5-carboxym 98.1 1.6E-05 5.4E-10 79.0 12.1 99 164-264 22-175 (641)
261 2cdu_A NADPH oxidase; flavoenz 98.1 5.6E-06 1.9E-10 80.1 8.7 99 5-129 149-250 (452)
262 2qae_A Lipoamide, dihydrolipoy 98.1 5.3E-06 1.8E-10 80.6 8.6 99 5-129 174-279 (468)
263 3rp8_A Flavoprotein monooxygen 98.1 1.2E-05 4.2E-10 76.5 10.9 100 162-265 22-183 (407)
264 1dxl_A Dihydrolipoamide dehydr 98.1 3.5E-06 1.2E-10 82.0 6.9 99 5-129 177-282 (470)
265 2vdc_G Glutamate synthase [NAD 98.1 1.8E-06 6.1E-11 83.4 4.6 90 162-262 121-218 (456)
266 2xdo_A TETX2 protein; tetracyc 98.1 1.4E-05 4.9E-10 75.8 10.6 101 162-264 25-183 (398)
267 3o0h_A Glutathione reductase; 98.1 8.7E-06 3E-10 79.5 9.1 99 5-129 191-291 (484)
268 3i6d_A Protoporphyrinogen oxid 98.1 1.4E-06 4.8E-11 84.7 3.4 40 220-261 248-287 (470)
269 3e1t_A Halogenase; flavoprotei 98.1 3.1E-05 1.1E-09 76.1 12.9 100 164-264 8-173 (512)
270 2uzz_A N-methyl-L-tryptophan o 98.1 2.6E-05 9E-10 73.2 11.7 54 206-262 150-203 (372)
271 2yg5_A Putrescine oxidase; oxi 98.1 2.5E-06 8.5E-11 82.6 4.8 40 1-43 1-40 (453)
272 3ihg_A RDME; flavoenzyme, anth 98.1 2E-05 6.9E-10 77.9 11.3 99 164-262 6-182 (535)
273 3ic9_A Dihydrolipoamide dehydr 98.1 1.1E-05 3.7E-10 78.9 9.2 98 5-129 174-277 (492)
274 4g6h_A Rotenone-insensitive NA 98.0 5.1E-06 1.7E-10 81.3 6.8 101 163-266 42-172 (502)
275 1pn0_A Phenol 2-monooxygenase; 98.0 3E-06 1E-10 85.8 5.3 35 5-42 8-47 (665)
276 4gde_A UDP-galactopyranose mut 98.0 2.8E-06 9.7E-11 83.6 4.9 53 205-261 222-274 (513)
277 3fmw_A Oxygenase; mithramycin, 98.0 2E-05 6.9E-10 78.2 10.9 98 164-263 50-207 (570)
278 2bcg_G Secretory pathway GDP d 98.0 4.9E-06 1.7E-10 80.5 6.1 60 204-264 241-301 (453)
279 3cgb_A Pyridine nucleotide-dis 98.0 1.1E-05 3.7E-10 78.7 8.5 101 164-266 37-155 (480)
280 1zk7_A HGII, reductase, mercur 98.0 1.2E-05 4.2E-10 78.1 8.9 96 5-128 176-273 (467)
281 4dna_A Probable glutathione re 98.0 1.5E-05 5.1E-10 77.3 9.3 98 5-129 170-271 (463)
282 3lad_A Dihydrolipoamide dehydr 98.0 2.2E-05 7.6E-10 76.4 9.9 99 5-129 180-283 (476)
283 3jsk_A Cypbp37 protein; octame 98.0 5.8E-05 2E-09 69.1 12.0 166 163-332 79-333 (344)
284 2b9w_A Putative aminooxidase; 98.0 6.8E-06 2.3E-10 78.8 6.2 54 205-261 203-256 (424)
285 1rsg_A FMS1 protein; FAD bindi 98.0 4E-06 1.4E-10 82.6 4.6 39 3-44 6-45 (516)
286 1m6i_A Programmed cell death p 98.0 9.3E-06 3.2E-10 79.4 7.1 99 5-128 180-284 (493)
287 1v0j_A UDP-galactopyranose mut 97.9 8.3E-06 2.8E-10 77.4 5.9 37 4-43 6-43 (399)
288 3dgh_A TRXR-1, thioredoxin red 97.9 1.1E-05 3.7E-10 78.8 6.9 98 5-129 187-292 (483)
289 3l8k_A Dihydrolipoyl dehydroge 97.9 4.2E-05 1.4E-09 74.2 11.0 97 165-266 6-147 (466)
290 3urh_A Dihydrolipoyl dehydroge 97.9 2.3E-05 7.8E-10 76.6 9.1 99 5-129 198-303 (491)
291 3dk9_A Grase, GR, glutathione 97.9 1.3E-05 4.3E-10 78.2 7.0 99 5-129 187-296 (478)
292 2qa2_A CABE, polyketide oxygen 97.9 7.6E-05 2.6E-09 72.9 12.0 100 162-263 11-166 (499)
293 3c96_A Flavin-containing monoo 97.9 3.8E-05 1.3E-09 73.2 9.6 100 163-265 4-171 (410)
294 2jae_A L-amino acid oxidase; o 97.9 1.1E-05 3.7E-10 78.9 5.8 39 2-43 8-46 (489)
295 3hdq_A UDP-galactopyranose mut 97.9 1.3E-05 4.5E-10 75.5 5.9 37 4-43 28-64 (397)
296 2qa1_A PGAE, polyketide oxygen 97.9 0.00014 4.7E-09 71.1 13.2 101 162-264 10-166 (500)
297 3dgz_A Thioredoxin reductase 2 97.9 2.8E-05 9.5E-10 76.0 8.2 98 5-129 185-290 (488)
298 2e1m_A L-glutamate oxidase; L- 97.9 1.3E-05 4.5E-10 74.8 5.6 38 3-43 42-80 (376)
299 3ihm_A Styrene monooxygenase A 97.9 9.1E-06 3.1E-10 78.0 4.5 34 5-41 22-55 (430)
300 1y56_A Hypothetical protein PH 97.8 2.2E-05 7.4E-10 76.8 7.1 99 164-265 109-221 (493)
301 3nks_A Protoporphyrinogen oxid 97.8 1E-05 3.6E-10 78.8 4.6 55 205-261 234-288 (477)
302 4dsg_A UDP-galactopyranose mut 97.8 1.7E-05 5.9E-10 77.2 6.0 37 4-43 8-45 (484)
303 3c4n_A Uncharacterized protein 97.8 4.2E-05 1.5E-09 72.7 8.1 54 207-263 174-236 (405)
304 2gag_A Heterotetrameric sarcos 97.8 7.4E-05 2.5E-09 78.9 10.3 100 164-265 129-255 (965)
305 1cjc_A Protein (adrenodoxin re 97.8 7.5E-06 2.6E-10 79.1 2.5 91 162-263 5-106 (460)
306 1gte_A Dihydropyrimidine dehyd 97.8 1.1E-05 3.9E-10 85.7 3.8 94 163-265 187-290 (1025)
307 3lov_A Protoporphyrinogen oxid 97.8 1.8E-05 6.2E-10 77.0 4.9 36 5-43 4-41 (475)
308 1sez_A Protoporphyrinogen oxid 97.7 1.9E-05 6.4E-10 77.5 4.9 37 4-43 12-48 (504)
309 3qfa_A Thioredoxin reductase 1 97.7 6.7E-05 2.3E-09 73.8 8.6 98 5-129 210-318 (519)
310 2qcu_A Aerobic glycerol-3-phos 97.7 0.00028 9.7E-09 69.0 12.6 55 207-263 151-210 (501)
311 1d5t_A Guanine nucleotide diss 97.7 4E-05 1.4E-09 73.5 6.2 59 204-264 233-291 (433)
312 2rgh_A Alpha-glycerophosphate 97.7 2E-05 6.9E-10 78.4 4.0 58 204-262 187-249 (571)
313 3k30_A Histamine dehydrogenase 97.7 6.8E-05 2.3E-09 76.4 7.8 98 5-127 523-625 (690)
314 1lqt_A FPRA; NADP+ derivative, 97.7 8.6E-06 3E-10 78.6 0.8 89 163-262 3-107 (456)
315 2ivd_A PPO, PPOX, protoporphyr 97.7 3.4E-05 1.2E-09 75.1 5.0 37 4-43 15-51 (478)
316 3g5s_A Methylenetetrahydrofola 97.7 4.5E-05 1.6E-09 70.5 5.5 34 6-42 2-35 (443)
317 3c4a_A Probable tryptophan hyd 97.7 3.2E-05 1.1E-09 72.9 4.7 35 6-43 1-37 (381)
318 2e5v_A L-aspartate oxidase; ar 97.6 0.00029 9.9E-09 68.3 11.4 98 165-264 1-177 (472)
319 2bi7_A UDP-galactopyranose mut 97.6 3.8E-05 1.3E-09 72.4 5.1 36 5-43 3-38 (384)
320 1ps9_A 2,4-dienoyl-COA reducta 97.6 7.8E-05 2.7E-09 75.8 7.5 87 163-266 373-470 (671)
321 3g3e_A D-amino-acid oxidase; F 97.6 2.9E-05 9.9E-10 72.3 4.0 34 6-42 1-40 (351)
322 2x8g_A Thioredoxin glutathione 97.6 0.00013 4.4E-09 73.2 8.9 97 5-128 286-397 (598)
323 2iid_A L-amino-acid oxidase; f 97.6 4.5E-05 1.5E-09 74.7 5.3 37 4-43 32-68 (498)
324 1i8t_A UDP-galactopyranose mut 97.6 4.3E-05 1.5E-09 71.6 4.8 35 6-43 2-36 (367)
325 2vvm_A Monoamine oxidase N; FA 97.6 4.4E-05 1.5E-09 74.7 4.9 55 205-261 255-310 (495)
326 1kf6_A Fumarate reductase flav 97.4 0.00089 3E-08 66.9 12.0 97 164-261 6-195 (602)
327 1jnr_A Adenylylsulfate reducta 97.4 0.00012 4.1E-09 73.8 4.9 35 5-42 22-60 (643)
328 2dkh_A 3-hydroxybenzoate hydro 97.4 0.00095 3.2E-08 67.3 11.3 99 164-262 33-210 (639)
329 1b37_A Protein (polyamine oxid 97.3 0.00017 5.8E-09 70.0 5.4 54 206-261 207-268 (472)
330 3c4a_A Probable tryptophan hyd 97.3 0.00012 4.2E-09 68.8 4.2 86 165-263 2-143 (381)
331 2r0c_A REBC; flavin adenine di 97.3 0.0013 4.4E-08 65.1 10.8 95 164-263 27-196 (549)
332 2rgh_A Alpha-glycerophosphate 97.2 0.0049 1.7E-07 61.1 14.8 34 163-196 32-65 (571)
333 1chu_A Protein (L-aspartate ox 97.2 0.00095 3.2E-08 65.8 9.4 33 164-197 9-41 (540)
334 4gut_A Lysine-specific histone 97.2 0.00024 8.1E-09 72.9 5.1 41 218-260 542-582 (776)
335 1o94_A Tmadh, trimethylamine d 97.2 0.00038 1.3E-08 71.3 6.5 98 5-128 528-648 (729)
336 1kdg_A CDH, cellobiose dehydro 97.2 0.00028 9.7E-09 69.8 5.2 58 210-268 201-266 (546)
337 1ju2_A HydroxynitrIle lyase; f 97.2 0.00015 5.3E-09 71.4 3.0 35 4-42 25-59 (536)
338 2z3y_A Lysine-specific histone 97.1 0.00034 1.2E-08 70.9 5.2 37 4-43 106-142 (662)
339 2xag_A Lysine-specific histone 97.1 0.0004 1.4E-08 71.8 5.5 36 5-43 278-313 (852)
340 2h88_A Succinate dehydrogenase 97.0 0.0036 1.2E-07 62.6 11.5 50 211-261 161-215 (621)
341 3t37_A Probable dehydrogenase; 97.0 0.00037 1.3E-08 68.6 4.1 52 216-268 222-276 (526)
342 3q9t_A Choline dehydrogenase a 97.0 0.00041 1.4E-08 68.7 4.3 36 4-42 5-41 (577)
343 4gut_A Lysine-specific histone 97.0 0.0058 2E-07 62.6 12.5 35 164-198 337-371 (776)
344 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00039 1.3E-08 70.0 3.4 36 5-43 56-100 (721)
345 2bs2_A Quinol-fumarate reducta 96.9 0.0073 2.5E-07 60.8 12.7 50 211-261 164-218 (660)
346 3i6d_A Protoporphyrinogen oxid 96.9 0.006 2E-07 58.8 11.7 35 164-198 6-46 (470)
347 2jbv_A Choline oxidase; alcoho 96.9 0.00064 2.2E-08 67.1 4.6 53 210-262 214-272 (546)
348 1gpe_A Protein (glucose oxidas 96.9 0.00088 3E-08 66.7 5.2 58 211-268 237-302 (587)
349 1coy_A Cholesterol oxidase; ox 96.8 0.00096 3.3E-08 65.2 5.3 36 4-42 10-45 (507)
350 4b63_A L-ornithine N5 monooxyg 96.8 0.0057 1.9E-07 59.6 10.8 102 165-266 41-217 (501)
351 3qvp_A Glucose oxidase; oxidor 96.8 0.00074 2.5E-08 66.9 4.2 59 209-267 231-297 (583)
352 1n4w_A CHOD, cholesterol oxida 96.8 0.00096 3.3E-08 65.2 5.0 36 4-42 4-39 (504)
353 4g65_A TRK system potassium up 96.8 0.0034 1.2E-07 60.3 8.4 100 140-262 210-311 (461)
354 1jnr_A Adenylylsulfate reducta 96.6 0.013 4.4E-07 59.0 11.9 49 213-261 159-216 (643)
355 1pn0_A Phenol 2-monooxygenase; 96.6 0.011 3.8E-07 59.7 11.5 31 165-195 10-45 (665)
356 3fim_B ARYL-alcohol oxidase; A 96.5 0.00098 3.4E-08 65.8 2.8 55 208-262 211-275 (566)
357 3lk7_A UDP-N-acetylmuramoylala 96.4 0.005 1.7E-07 59.1 6.6 133 4-191 8-143 (451)
358 3kkj_A Amine oxidase, flavin-c 96.3 0.004 1.4E-07 55.1 5.1 35 164-198 3-37 (336)
359 1vg0_A RAB proteins geranylger 96.2 0.0057 2E-07 60.8 6.2 61 204-264 377-438 (650)
360 3gyx_A Adenylylsulfate reducta 96.0 0.027 9.4E-07 56.6 10.2 32 164-195 23-60 (662)
361 4dgk_A Phytoene dehydrogenase; 95.7 0.0075 2.6E-07 58.7 4.5 36 164-199 2-37 (501)
362 3eag_A UDP-N-acetylmuramate:L- 95.7 0.019 6.7E-07 52.4 6.9 80 162-268 3-83 (326)
363 3dfz_A SIRC, precorrin-2 dehyd 95.6 0.012 4.2E-07 50.1 5.0 107 162-299 30-141 (223)
364 3fpz_A Thiazole biosynthetic e 95.6 0.0097 3.3E-07 54.4 4.6 76 153-228 55-139 (326)
365 3lk7_A UDP-N-acetylmuramoylala 95.6 0.016 5.5E-07 55.6 6.3 82 162-268 8-89 (451)
366 3llv_A Exopolyphosphatase-rela 95.6 0.018 6E-07 45.4 5.5 34 5-41 6-39 (141)
367 1id1_A Putative potassium chan 95.5 0.022 7.5E-07 45.5 5.7 33 5-40 3-35 (153)
368 3ic5_A Putative saccharopine d 95.2 0.019 6.5E-07 43.3 4.4 34 5-41 5-39 (118)
369 3oz2_A Digeranylgeranylglycero 95.1 0.02 6.8E-07 53.6 5.1 99 165-264 6-163 (397)
370 2g1u_A Hypothetical protein TM 95.1 0.026 8.8E-07 45.3 5.0 34 5-41 19-52 (155)
371 3fwz_A Inner membrane protein 95.1 0.033 1.1E-06 43.7 5.5 34 5-41 7-40 (140)
372 1lss_A TRK system potassium up 95.0 0.026 8.8E-07 44.1 4.9 33 5-40 4-36 (140)
373 4hv4_A UDP-N-acetylmuramate--L 95.0 0.016 5.4E-07 56.3 4.1 127 4-189 21-151 (494)
374 3eag_A UDP-N-acetylmuramate:L- 94.8 0.034 1.2E-06 50.8 5.7 79 4-130 3-82 (326)
375 2iid_A L-amino-acid oxidase; f 94.8 0.034 1.2E-06 54.0 6.0 61 162-222 32-109 (498)
376 2hmt_A YUAA protein; RCK, KTN, 94.6 0.041 1.4E-06 43.1 4.9 34 5-41 6-39 (144)
377 3tl2_A Malate dehydrogenase; c 94.5 0.036 1.2E-06 50.1 5.0 38 1-40 4-41 (315)
378 4e12_A Diketoreductase; oxidor 94.4 0.042 1.4E-06 49.0 5.2 37 1-41 1-37 (283)
379 2vvm_A Monoamine oxidase N; FA 94.4 0.09 3.1E-06 51.0 7.9 35 6-43 40-74 (495)
380 3nrn_A Uncharacterized protein 94.2 0.046 1.6E-06 51.8 5.3 34 165-198 2-35 (421)
381 1vg0_A RAB proteins geranylger 94.0 0.18 6.3E-06 50.1 9.1 38 4-44 7-44 (650)
382 3ka7_A Oxidoreductase; structu 93.9 0.056 1.9E-06 51.2 5.2 34 165-198 2-35 (425)
383 3ihm_A Styrene monooxygenase A 93.9 0.046 1.6E-06 52.0 4.6 34 163-196 22-55 (430)
384 3dfz_A SIRC, precorrin-2 dehyd 93.9 0.062 2.1E-06 45.8 4.9 34 4-40 30-63 (223)
385 4gx0_A TRKA domain protein; me 93.9 0.11 3.7E-06 51.4 7.3 170 3-201 125-386 (565)
386 2e1m_A L-glutamate oxidase; L- 93.8 0.07 2.4E-06 49.6 5.4 62 162-223 43-130 (376)
387 2b9w_A Putative aminooxidase; 93.8 0.077 2.6E-06 50.2 5.9 61 162-223 5-82 (424)
388 2bcg_G Secretory pathway GDP d 93.7 0.12 4.2E-06 49.5 7.3 38 4-44 10-47 (453)
389 3c85_A Putative glutathione-re 93.7 0.091 3.1E-06 43.3 5.5 34 5-41 39-73 (183)
390 3dme_A Conserved exported prot 93.6 0.065 2.2E-06 49.4 5.0 34 164-197 5-38 (369)
391 1f0y_A HCDH, L-3-hydroxyacyl-C 93.6 0.076 2.6E-06 47.8 5.3 35 4-41 14-48 (302)
392 4hv4_A UDP-N-acetylmuramate--L 93.6 0.082 2.8E-06 51.2 5.8 77 162-268 21-98 (494)
393 3g5s_A Methylenetetrahydrofola 93.5 0.082 2.8E-06 49.1 5.2 33 164-196 2-34 (443)
394 3k7m_X 6-hydroxy-L-nicotine ox 93.5 0.067 2.3E-06 50.8 4.9 34 165-198 3-36 (431)
395 3nks_A Protoporphyrinogen oxid 93.5 0.067 2.3E-06 51.5 4.9 35 164-198 3-39 (477)
396 2g1u_A Hypothetical protein TM 93.4 0.11 3.7E-06 41.5 5.3 37 162-198 18-54 (155)
397 1d5t_A Guanine nucleotide diss 93.4 0.079 2.7E-06 50.4 5.2 40 2-44 3-42 (433)
398 1bg6_A N-(1-D-carboxylethyl)-L 93.3 0.075 2.6E-06 49.1 4.9 36 1-40 1-36 (359)
399 3cgv_A Geranylgeranyl reductas 93.3 0.078 2.7E-06 49.6 5.0 35 164-198 5-39 (397)
400 3k96_A Glycerol-3-phosphate de 93.3 0.093 3.2E-06 48.4 5.3 38 1-41 25-62 (356)
401 2jae_A L-amino acid oxidase; o 93.3 0.091 3.1E-06 50.8 5.5 37 163-199 11-47 (489)
402 2oln_A NIKD protein; flavoprot 93.2 0.081 2.8E-06 49.6 4.9 35 164-198 5-39 (397)
403 3l4b_C TRKA K+ channel protien 93.2 0.093 3.2E-06 44.6 4.9 32 7-41 2-33 (218)
404 4gde_A UDP-galactopyranose mut 93.1 0.065 2.2E-06 52.1 4.3 35 165-199 12-47 (513)
405 1rsg_A FMS1 protein; FAD bindi 93.1 0.086 2.9E-06 51.5 5.1 36 163-198 8-44 (516)
406 1s3e_A Amine oxidase [flavin-c 93.1 0.097 3.3E-06 51.1 5.5 61 163-224 4-81 (520)
407 3nix_A Flavoprotein/dehydrogen 93.1 0.081 2.8E-06 50.0 4.8 33 164-196 6-38 (421)
408 1y6j_A L-lactate dehydrogenase 93.1 0.11 3.7E-06 47.1 5.4 37 4-41 6-42 (318)
409 3pqe_A L-LDH, L-lactate dehydr 93.1 0.098 3.4E-06 47.5 5.1 39 1-40 1-39 (326)
410 2gf3_A MSOX, monomeric sarcosi 93.0 0.091 3.1E-06 49.0 5.0 34 164-197 4-37 (389)
411 3mog_A Probable 3-hydroxybutyr 92.9 0.11 3.9E-06 50.0 5.5 38 1-41 1-38 (483)
412 1y56_B Sarcosine oxidase; dehy 92.9 0.098 3.3E-06 48.7 5.0 33 164-196 6-38 (382)
413 2pyx_A Tryptophan halogenase; 92.9 0.062 2.1E-06 52.6 3.8 35 163-197 7-53 (526)
414 3fwz_A Inner membrane protein 92.9 0.41 1.4E-05 37.3 8.0 77 163-263 7-83 (140)
415 2x5o_A UDP-N-acetylmuramoylala 92.8 0.042 1.4E-06 52.5 2.3 77 162-267 4-80 (439)
416 4huj_A Uncharacterized protein 92.8 0.069 2.3E-06 45.6 3.5 35 3-40 21-56 (220)
417 1c0p_A D-amino acid oxidase; a 92.8 0.11 3.7E-06 48.0 5.1 33 163-195 6-38 (363)
418 2ivd_A PPO, PPOX, protoporphyr 92.7 0.11 3.8E-06 50.0 5.3 37 162-198 15-51 (478)
419 3nyc_A D-arginine dehydrogenas 92.7 0.1 3.5E-06 48.4 4.8 35 163-198 9-43 (381)
420 2uyy_A N-PAC protein; long-cha 92.6 0.15 5.2E-06 46.1 5.7 37 2-41 27-63 (316)
421 2x5o_A UDP-N-acetylmuramoylala 92.6 0.1 3.4E-06 49.8 4.6 130 5-193 5-137 (439)
422 1pzg_A LDH, lactate dehydrogen 92.6 0.13 4.6E-06 46.8 5.2 34 5-41 9-43 (331)
423 3i83_A 2-dehydropantoate 2-red 92.6 0.3 1E-05 44.2 7.6 83 164-268 3-88 (320)
424 1kyq_A Met8P, siroheme biosynt 92.5 0.059 2E-06 47.4 2.7 35 4-41 12-46 (274)
425 1id1_A Putative potassium chan 92.5 0.18 6.3E-06 40.0 5.5 33 163-195 3-35 (153)
426 4dio_A NAD(P) transhydrogenase 92.5 0.13 4.4E-06 47.9 5.1 34 5-41 190-223 (405)
427 3qha_A Putative oxidoreductase 92.5 0.094 3.2E-06 47.0 4.1 34 5-41 15-48 (296)
428 2ewd_A Lactate dehydrogenase,; 92.5 0.13 4.5E-06 46.6 5.1 36 4-41 3-38 (317)
429 2dpo_A L-gulonate 3-dehydrogen 92.4 0.15 5.1E-06 46.2 5.3 35 4-41 5-39 (319)
430 2bi7_A UDP-galactopyranose mut 92.4 0.13 4.3E-06 48.1 5.0 35 164-198 4-38 (384)
431 2a9f_A Putative malic enzyme ( 92.3 0.14 4.9E-06 47.2 5.0 35 5-41 188-222 (398)
432 1sez_A Protoporphyrinogen oxid 92.3 0.15 5.2E-06 49.5 5.6 37 163-199 13-49 (504)
433 4ffl_A PYLC; amino acid, biosy 92.3 0.16 5.4E-06 47.0 5.5 34 6-42 2-35 (363)
434 1vl6_A Malate oxidoreductase; 92.3 0.14 4.9E-06 47.1 5.0 35 5-41 192-226 (388)
435 4e21_A 6-phosphogluconate dehy 92.2 0.14 4.7E-06 47.3 4.9 37 2-41 19-55 (358)
436 3hdq_A UDP-galactopyranose mut 92.2 0.14 4.9E-06 47.9 5.0 36 163-198 29-64 (397)
437 2yg5_A Putrescine oxidase; oxi 92.1 0.15 5.2E-06 48.7 5.3 35 164-198 6-40 (453)
438 3dje_A Fructosyl amine: oxygen 92.0 0.15 5E-06 48.5 5.1 36 163-198 6-42 (438)
439 2i0z_A NAD(FAD)-utilizing dehy 92.0 0.15 5.2E-06 48.7 5.1 35 164-198 27-61 (447)
440 3p2y_A Alanine dehydrogenase/p 92.0 0.14 4.7E-06 47.3 4.5 34 5-41 184-217 (381)
441 1t2d_A LDH-P, L-lactate dehydr 91.9 0.17 5.9E-06 45.9 5.1 36 4-41 3-38 (322)
442 3llv_A Exopolyphosphatase-rela 91.8 0.17 5.9E-06 39.5 4.5 33 163-195 6-38 (141)
443 2gag_B Heterotetrameric sarcos 91.7 0.13 4.4E-06 48.2 4.2 33 164-196 22-56 (405)
444 1v0j_A UDP-galactopyranose mut 91.7 0.16 5.6E-06 47.7 4.9 36 163-198 7-43 (399)
445 3ghy_A Ketopantoate reductase 91.6 0.2 6.9E-06 45.7 5.4 33 5-40 3-35 (335)
446 3ado_A Lambda-crystallin; L-gu 91.6 0.15 5.1E-06 46.1 4.2 36 163-198 6-41 (319)
447 3ps9_A TRNA 5-methylaminomethy 91.6 0.18 6.2E-06 51.0 5.4 35 164-198 273-307 (676)
448 3pvc_A TRNA 5-methylaminomethy 91.5 0.17 6E-06 51.2 5.2 35 164-198 265-299 (689)
449 2e4g_A Tryptophan halogenase; 91.5 0.2 6.7E-06 49.3 5.4 34 163-196 25-61 (550)
450 2aqj_A Tryptophan halogenase, 91.5 0.18 6.2E-06 49.4 5.2 34 163-196 5-41 (538)
451 3d0o_A L-LDH 1, L-lactate dehy 91.3 0.24 8.2E-06 44.8 5.4 36 4-40 5-40 (317)
452 3hwr_A 2-dehydropantoate 2-red 91.3 0.38 1.3E-05 43.6 6.7 100 161-281 17-117 (318)
453 1i8t_A UDP-galactopyranose mut 91.3 0.17 5.9E-06 46.9 4.5 34 165-198 3-36 (367)
454 2z3y_A Lysine-specific histone 91.2 0.24 8.2E-06 49.9 5.8 37 162-198 106-142 (662)
455 3g3e_A D-amino-acid oxidase; F 91.1 0.14 4.9E-06 47.0 3.8 32 165-196 2-39 (351)
456 4ezb_A Uncharacterized conserv 91.1 0.31 1.1E-05 44.1 5.9 92 164-282 25-119 (317)
457 2ew2_A 2-dehydropantoate 2-red 91.1 0.2 7E-06 45.1 4.8 32 6-40 4-35 (316)
458 2xag_A Lysine-specific histone 91.1 0.23 7.9E-06 51.4 5.6 35 163-197 278-312 (852)
459 1jw9_B Molybdopterin biosynthe 91.1 0.21 7.2E-06 43.4 4.6 36 5-42 31-66 (249)
460 3g17_A Similar to 2-dehydropan 91.1 0.21 7.2E-06 44.7 4.7 33 6-41 3-35 (294)
461 3i83_A 2-dehydropantoate 2-red 91.0 0.22 7.4E-06 45.2 4.9 32 6-40 3-34 (320)
462 3ado_A Lambda-crystallin; L-gu 90.9 0.27 9.3E-06 44.3 5.3 34 5-41 6-39 (319)
463 3lov_A Protoporphyrinogen oxid 90.9 0.18 6.3E-06 48.4 4.5 34 164-197 5-40 (475)
464 3hn7_A UDP-N-acetylmuramate-L- 90.8 0.42 1.4E-05 46.6 7.0 79 162-268 18-97 (524)
465 1lss_A TRK system potassium up 90.8 0.32 1.1E-05 37.6 5.1 32 163-194 4-35 (140)
466 2izz_A Pyrroline-5-carboxylate 90.7 0.25 8.4E-06 44.9 4.9 38 3-40 20-58 (322)
467 3qsg_A NAD-binding phosphogluc 90.7 0.21 7.3E-06 45.1 4.5 34 4-40 23-57 (312)
468 3hn2_A 2-dehydropantoate 2-red 90.7 0.24 8E-06 44.8 4.7 32 6-40 3-34 (312)
469 3orq_A N5-carboxyaminoimidazol 90.7 0.35 1.2E-05 45.0 6.0 36 4-42 11-46 (377)
470 3g0o_A 3-hydroxyisobutyrate de 90.6 0.26 8.8E-06 44.3 4.9 34 5-41 7-40 (303)
471 2qyt_A 2-dehydropantoate 2-red 90.6 0.17 5.8E-06 45.7 3.7 36 1-39 4-45 (317)
472 1x13_A NAD(P) transhydrogenase 90.4 0.25 8.6E-06 46.3 4.8 34 5-41 172-205 (401)
473 3gpi_A NAD-dependent epimerase 90.4 0.37 1.2E-05 42.7 5.7 34 5-41 3-36 (286)
474 2weu_A Tryptophan 5-halogenase 90.3 0.17 5.8E-06 49.2 3.7 33 164-196 3-38 (511)
475 1lld_A L-lactate dehydrogenase 90.3 0.27 9.4E-06 44.5 4.8 35 6-41 8-42 (319)
476 2hmt_A YUAA protein; RCK, KTN, 90.2 0.32 1.1E-05 37.8 4.6 34 162-195 5-38 (144)
477 4dsg_A UDP-galactopyranose mut 90.2 0.32 1.1E-05 47.0 5.5 36 163-198 9-45 (484)
478 3ic5_A Putative saccharopine d 90.2 0.3 1E-05 36.4 4.3 33 163-195 5-38 (118)
479 1l7d_A Nicotinamide nucleotide 90.2 0.3 1E-05 45.6 5.1 34 5-41 172-205 (384)
480 1kyq_A Met8P, siroheme biosynt 90.2 0.22 7.7E-06 43.8 3.9 34 162-195 12-45 (274)
481 3g79_A NDP-N-acetyl-D-galactos 90.1 0.23 7.8E-06 47.6 4.3 36 4-42 17-54 (478)
482 3q2o_A Phosphoribosylaminoimid 90.1 0.41 1.4E-05 44.7 6.0 36 4-42 13-48 (389)
483 2raf_A Putative dinucleotide-b 90.1 0.35 1.2E-05 40.7 5.0 34 5-41 19-52 (209)
484 3l9w_A Glutathione-regulated p 90.1 0.36 1.2E-05 45.5 5.5 34 5-41 4-37 (413)
485 1pjc_A Protein (L-alanine dehy 89.9 0.33 1.1E-05 44.8 5.1 34 5-41 167-200 (361)
486 3dhn_A NAD-dependent epimerase 89.8 0.27 9.2E-06 41.8 4.2 35 4-41 3-38 (227)
487 4at0_A 3-ketosteroid-delta4-5a 89.8 0.31 1.1E-05 47.4 5.1 34 165-198 43-76 (510)
488 3ego_A Probable 2-dehydropanto 89.7 0.98 3.3E-05 40.5 8.0 72 165-259 4-75 (307)
489 1u8x_X Maltose-6'-phosphate gl 89.7 0.2 6.9E-06 47.9 3.5 41 1-41 24-67 (472)
490 3da1_A Glycerol-3-phosphate de 89.7 0.29 1E-05 48.2 4.8 34 163-196 18-51 (561)
491 3c24_A Putative oxidoreductase 89.7 0.38 1.3E-05 42.7 5.2 32 6-40 12-44 (286)
492 2q3e_A UDP-glucose 6-dehydroge 89.6 0.27 9.4E-06 47.2 4.4 34 5-41 5-40 (467)
493 3ggo_A Prephenate dehydrogenas 89.6 0.43 1.5E-05 43.1 5.5 36 5-41 33-68 (314)
494 3k5i_A Phosphoribosyl-aminoimi 89.6 0.4 1.4E-05 45.0 5.5 36 3-42 22-57 (403)
495 3phh_A Shikimate dehydrogenase 89.5 0.39 1.3E-05 42.1 5.0 34 5-41 118-151 (269)
496 3doj_A AT3G25530, dehydrogenas 89.5 0.38 1.3E-05 43.4 5.0 34 5-41 21-54 (310)
497 3gg2_A Sugar dehydrogenase, UD 89.4 0.34 1.2E-05 46.2 4.9 33 6-41 3-35 (450)
498 3gvi_A Malate dehydrogenase; N 89.4 0.39 1.3E-05 43.5 5.0 36 4-41 6-41 (324)
499 3tri_A Pyrroline-5-carboxylate 89.3 0.45 1.5E-05 42.2 5.3 37 5-41 3-39 (280)
500 3enk_A UDP-glucose 4-epimerase 89.2 0.44 1.5E-05 43.4 5.3 38 1-41 1-39 (341)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=6.9e-57 Score=435.37 Aligned_cols=401 Identities=30% Similarity=0.495 Sum_probs=346.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||||||||+||+++|.+|+++|. ..+|+|||+++..+|.++.+++.++....... .......+++.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~ 76 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREKTFE----------RICIRPAQFWE 76 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSSCSG----------GGBSSCHHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCCCHH----------HhccCCHHHHH
Confidence 46899999999999999999999986 45799999999999998877766554321110 01235567888
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCC
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 163 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~ 163 (434)
+.+++++.++.++.+++..+.+.+.++..+.||+||+|||+.|+.|+ ++|.+..+++++++..++..+.+.+.. .+
T Consensus 77 ~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~---i~g~~~~~v~~~~~~~d~~~l~~~~~~-~~ 152 (415)
T 3lxd_A 77 DKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLS---CVGADLAGVHAVRTKEDADRLMAELDA-GA 152 (415)
T ss_dssp HTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCB---TTSSCCBTEECCCSHHHHHHHHHHHHT-TC
T ss_pred HCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCC---CCCccccCEEEEcCHHHHHHHHHHhhh-cC
Confidence 89999999999999999999999999999999999999999998887 577777889999999999988887752 27
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 243 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~ 243 (434)
++++|||+|++|+|+|..+.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|+++.. +++++..+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~ 231 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVR 231 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEE
Confidence 8999999999999999999999999999999999998878999999999999999999999999999987 456777899
Q ss_pred eCCCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEeccccccccccc-CcceecccHHHHHHH
Q 013914 244 LKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLY-REMRRVEHVDHARKS 321 (434)
Q Consensus 244 ~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~-~~~~~~~~~~~A~~~ 321 (434)
+.+|+++++|.||+|+|.+|++++++. ++..++ +|.||+++||++|+|||+|||+..+...+ +.+.+.++|..|..|
T Consensus 232 l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~q 310 (415)
T 3lxd_A 232 MQDGSVIPADIVIVGIGIVPCVGALISAGASGGN-GVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDM 310 (415)
T ss_dssp ESSSCEEECSEEEECSCCEESCHHHHHTTCCCSS-SEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHH
T ss_pred eCCCCEEEcCEEEECCCCccChHHHHhCCCCcCC-CEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHH
Confidence 999999999999999999999988754 555564 59999999999999999999999887666 777788999999999
Q ss_pred HHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCC--CEEEEcCCCcccCCCcEEEEEEeCCEEEEEEEecC
Q 013914 322 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESG 399 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~ 399 (434)
|+.||+||++.. ..|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|+.++|.
T Consensus 311 g~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~ 381 (415)
T 3lxd_A 311 ATAAAKDICGAP-----VPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPA----TRSFSVVYLKGGKVVALDCVNM 381 (415)
T ss_dssp HHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEEGG----GTEEEEEEEETTEEEEEEEESC
T ss_pred HHHHHHHhcCCC-----CCCCCCCeeEeeeCCcEEEEEeCCCCCCEEEEEecCC----CCeEEEEEEECCEEEEEEEECC
Confidence 999999999763 57888999999999999999998764 344455543 4679999999999999999984
Q ss_pred CHHHHHHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 400 TPEENKAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 400 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
..+...+..+|..+.++ +.++|.++.+++.+
T Consensus 382 -~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~ 412 (415)
T 3lxd_A 382 -VKDYVQGKKLVEARAQI-APEQLADAGVPLKE 412 (415)
T ss_dssp -HHHHHHHHHHHHHTCCC-CHHHHTCTTSCGGG
T ss_pred -hHHHHHHHHHHHCCCCC-CHHHhcCCCCChHH
Confidence 67788899999999988 57899999988653
No 2
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.4e-56 Score=431.86 Aligned_cols=395 Identities=25% Similarity=0.395 Sum_probs=340.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
++|||||||+||+++|.+|+++|. +.+|+|||+++..+|.++.+++.++........ . ....+++.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~----------~-~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPP----------I-LAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCC----------B-SSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCCHHH----------h-cCCHHHHHHC
Confidence 589999999999999999999986 467999999999999988887765433221110 1 2345678888
Q ss_pred CcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCc
Q 013914 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 165 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 165 (434)
+++++.+++++.+++..+++.+.+++++.||+||+|||+.|+.|+ ++|.+.++++++++..++..+++.+. .+++
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~---ipG~~~~~v~~~~~~~d~~~l~~~~~--~~~~ 145 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMA---LPGSQLPGVVTLRTYGDVQVLRDSWT--SATR 145 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC---CTTTTSTTEECCCSHHHHHHHHHHCC--TTCE
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCC---CCCccccceEEeccHHHHHHHHHHhc--cCCe
Confidence 999999999999999999999999999999999999999998887 67777788999999999988877654 4789
Q ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013914 166 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK 245 (434)
Q Consensus 166 v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~ 245 (434)
++|||+|++|+|+|..+.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|++++. ++.+..+++.
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~ 223 (410)
T 3ef6_A 146 LLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMAS 223 (410)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEEC
Confidence 99999999999999999999999999999999988768999999999999999999999999999987 4455688999
Q ss_pred CCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHH
Q 013914 246 DGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 324 (434)
Q Consensus 246 ~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~ 324 (434)
+|+++++|.||+|+|.+|++++++. ++..+ ++|.||+++||++|+|||+|||+..+... +...++++|..|..||+.
T Consensus 224 dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~ 301 (410)
T 3ef6_A 224 DGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAA 301 (410)
T ss_dssp TSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHH
T ss_pred CCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHH
Confidence 9999999999999999999988754 56656 55999999999999999999999987764 666677899999999999
Q ss_pred HHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCC--CEEEEcCCCcccCCCcEEEEEEeCCEEEEEEEecCCHH
Q 013914 325 AVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPE 402 (434)
Q Consensus 325 aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~~~ 402 (434)
||+||++.. ..|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|++++|. ..
T Consensus 302 aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~~~~~~-~~ 371 (410)
T 3ef6_A 302 VAAAILGKN-----VSAPQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPG----SGAALLFRLQERRIQAVVAVDA-PR 371 (410)
T ss_dssp HHHHHTTCC-----CCCCBCCEEEEEETTEEEEEESCSSSSSEEEEESCTT----SSSEEEEEEETTEEEEEEEESC-HH
T ss_pred HHHHHcCCC-----CCCCCCCeeEEEECCceEEEEcCCCCCCEEEEEeeCC----CCeEEEEEEECCEEEEEEEECC-hH
Confidence 999999863 67888999999999999999998764 345555544 4678999999999999999985 67
Q ss_pred HHHHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 403 ENKAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 403 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
+...+..+|+.+..+ +.++|.++.+++.+
T Consensus 372 ~~~~~~~~i~~~~~~-~~~~l~~~~~~l~~ 400 (410)
T 3ef6_A 372 DFALATRLVEARAAI-EPARLADLSNSMRD 400 (410)
T ss_dssp HHHHHHHHHHHTCBC-CHHHHHCTTSCGGG
T ss_pred HHHHHHHHHhCCCCC-CHHHhcCCCCCHHH
Confidence 788899999999988 56889999888754
No 3
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.7e-56 Score=426.34 Aligned_cols=397 Identities=29% Similarity=0.458 Sum_probs=343.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||||||||+||+++|.+|++.|+ +.+|+|||+++..+|.++.+++.++....... .......+++.+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~----------~~~~~~~~~~~~ 69 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGGDPN----------SLMFRPEKFFQD 69 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCCCTT----------SSBSSCHHHHHH
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCCCHH----------HccCCCHHHHHh
Confidence 3689999999999999999999987 34599999999989998888766554332111 112356778888
Q ss_pred cCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCC
Q 013914 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNG 164 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~ 164 (434)
.+++++. ..++.++++.+.+.+.++.++.||+||+|||++|+.|+ ++|.+..+++++++..++..+.+.+. .++
T Consensus 70 ~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~---i~g~~~~~v~~~~~~~d~~~l~~~~~--~~~ 143 (404)
T 3fg2_P 70 QAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLD---VPNASLPDVLYLRTLDESEVLRQRMP--DKK 143 (404)
T ss_dssp TTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCCC---STTTTSTTEECCSSHHHHHHHHHHGG--GCS
T ss_pred CCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCC---CCCCCCCcEEEECCHHHHHHHHHHhh--cCC
Confidence 9999999 79999999999999999999999999999999998887 57777788999999999988877765 478
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL 244 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~ 244 (434)
+++|||+|++|+|+|..+.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.|+++.. +++++..+.+
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~ 222 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVL 222 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEe
Confidence 999999999999999999999999999999999998878999999999999999999999999999987 3567778999
Q ss_pred CCCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHH
Q 013914 245 KDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAE 323 (434)
Q Consensus 245 ~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~ 323 (434)
.+|+++++|.||+|+|++|++++++. ++..++| |.||+++||++|+|||+|||+..+...++.+.+.++|..|..||+
T Consensus 223 ~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~ 301 (404)
T 3fg2_P 223 SDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQAR 301 (404)
T ss_dssp TTSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHH
T ss_pred CCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHH
Confidence 99999999999999999999988754 5666655 999999999999999999999988776777777889999999999
Q ss_pred HHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCC--CEEEEcCCCcccCCCcEEEEEEeCCEEEEEEEecCCH
Q 013914 324 QAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTP 401 (434)
Q Consensus 324 ~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~~ 401 (434)
.||+||++.. .+|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|+.++| ..
T Consensus 302 ~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~-~~ 371 (404)
T 3fg2_P 302 CVAARLTGDA-----KPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVA----ERSFSAFCYKAGKLIGIESVN-RA 371 (404)
T ss_dssp HHHHHTTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCCEEEEEEETT----TTEEEEEEEETTEEEEEEEES-CH
T ss_pred HHHHHhCCCC-----CCCCCCCceEeEECCcEEEEEeCCCCCCEEEEEecCC----CCcEEEEEEECCEEEEEEEeC-CH
Confidence 9999999763 57888999999999999999998753 344555543 567999999999999999998 46
Q ss_pred HHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 013914 402 EENKAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 402 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 431 (434)
.+...+..+|+.+..+ +.++|.++.+++.
T Consensus 372 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 400 (404)
T 3fg2_P 372 ADHVFGRKILPLDKSV-TPEQAADLSFDLK 400 (404)
T ss_dssp HHHHHHHHHTTTTCCC-CHHHHHCTTSCHH
T ss_pred HHHHHHHHHHHcCCCC-CHHHhcCCCCChH
Confidence 7788899999999988 5789999988764
No 4
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.8e-56 Score=432.33 Aligned_cols=401 Identities=18% Similarity=0.222 Sum_probs=319.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.+|||||||+||++||.+|++.|. +.+|+|||+++..+|.+|+++..+...... ... .......+++++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~-----~~~----~~~~~~~~~~~~~ 70 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPYVIGEVVED-----RRY----ALAYTPEKFYDRK 70 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHHHHTTSSCC-----GGG----TBCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHHHHcCCccc-----hhh----hhhcCHHHHHHhc
Confidence 479999999999999999999885 466999999998888877765422111100 000 0012334667788
Q ss_pred CcEEEcCCeeEEEECCCCEEEccC-----CcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHh
Q 013914 86 GIELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKA 160 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~ 160 (434)
+++++.+++|+.++.+.+.+.+.+ +.++.||+||||||++|+.|+ +++ .+++..++..++..+.+.+..
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~---i~g---~~~~~~~~~~~~~~l~~~~~~ 144 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG---FES---DITFTLRNLEDTDAIDQFIKA 144 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC---CCC---TTEECCSSHHHHHHHHHHHHH
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc---ccC---ceEEeeccHHHHHHHHHhhhc
Confidence 999999999999999998876532 236899999999999988765 454 568888999999998888776
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013914 161 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 240 (434)
Q Consensus 161 ~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~ 240 (434)
..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.++++||+++++++|++++. .
T Consensus 145 ~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~------~ 217 (437)
T 4eqs_A 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRLNEEINAING------N 217 (437)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEESCCEEEEET------T
T ss_pred cCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEeccEEEEecC------C
Confidence 67899999999999999999999999999999999999986 7999999999999999999999999999865 2
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHH
Q 013914 241 EVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHA 318 (434)
Q Consensus 241 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A 318 (434)
.+.+++|+++++|.|++|+|++||+++++. ++.. ++|+|.||+++||++|||||+|||+..++...+.+.+.+++..|
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A 297 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGA 297 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHH
T ss_pred eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHH
Confidence 578899999999999999999999998854 6766 67899999999999999999999999988878887788899999
Q ss_pred HHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCCC------E-E--EEcCCCcc--cCCCcEEEEEE-
Q 013914 319 RKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD------T-V--LFGDNDLA--SATHKFGTYWI- 386 (434)
Q Consensus 319 ~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~------~-~--~~~~~~~~--~~~~~~~~~~~- 386 (434)
.+||+.+|+||++.... ...++.+..+..+++..+..+|+++.+ . + ........ .++++|+|+++
T Consensus 298 ~~~g~~~a~ni~g~~~~---~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d 374 (437)
T 4eqs_A 298 HRAASIVAEQIAGNDTI---EFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYD 374 (437)
T ss_dssp HHHHHHHHHHHHSCTTC---CCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCc---ccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEEEEE
Confidence 99999999999986421 222344444455566677777877532 1 1 11111111 34567888877
Q ss_pred -eCCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhhhcc-CCCccc
Q 013914 387 -KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVLKNE-GLSFAS 432 (434)
Q Consensus 387 -~~~~ilG~~~~g~~-~~~-~~~~~~~i~~~~~~~~~~~l~~~-~~~~~~ 432 (434)
++++|||+|++|++ ++| ++.++.||++++|++||..+.-+ .++|.+
T Consensus 375 ~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~ 424 (437)
T 4eqs_A 375 TSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSH 424 (437)
T ss_dssp TTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCC
T ss_pred CCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCc
Confidence 57999999999986 777 49999999999999977765433 455554
No 5
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.8e-54 Score=419.47 Aligned_cols=400 Identities=26% Similarity=0.422 Sum_probs=330.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+.+||||||||+||+++|..|++.|. +.+|+|||+++..+|.++.+++.++...... .. ......++++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~--~~--------~~~~~~~~~~ 71 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKATA--ES--------LYLRTPDAYA 71 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCSCS--GG--------GBSSCHHHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCCCh--HH--------hcccCHHHHH
Confidence 36899999999999999999999986 3459999999888888877766554322110 00 0123457788
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCC---eEEecCHHHHHHHHHHHHh
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN---IFYLREIDDADKLVEAIKA 160 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~---v~~~~~~~~~~~~~~~l~~ 160 (434)
+.+++++.++.|+.++++.++|.+.+++++.||+||+|||++|+.|+ ++|.+..+ ++++++.+++..+.+.+.
T Consensus 72 ~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~---i~G~~~~~~~~v~~~~~~~d~~~l~~~l~- 147 (431)
T 1q1r_A 72 AQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLP---VASGAVGKANNFRYLRTLEDAECIRRQLI- 147 (431)
T ss_dssp HTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG---GGTTHHHHSTTEEESSSHHHHHHHHHTCC-
T ss_pred hCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCC---CCCcccCCCceEEEECCHHHHHHHHHHhh-
Confidence 89999999999999999889999988889999999999999998887 46654344 888899999888776553
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEec-CCCcE
Q 013914 161 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN-ADGEV 239 (434)
Q Consensus 161 ~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~-~~g~v 239 (434)
.+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|+++... +++.+
T Consensus 148 -~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v 226 (431)
T 1q1r_A 148 -ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKV 226 (431)
T ss_dssp -TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCE
T ss_pred -cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcE
Confidence 4789999999999999999999999999999999999887789999999999999999999999999999862 34666
Q ss_pred EEEEeCCCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHH
Q 013914 240 KEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHA 318 (434)
Q Consensus 240 ~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A 318 (434)
..+.+.+|+++++|.||+|+|++|++++++. ++..++ +|.||+++||+.|+|||+|||+..+.+.++...+.+++..|
T Consensus 227 ~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 305 (431)
T 1q1r_A 227 TAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDN-GIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNA 305 (431)
T ss_dssp EEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHH
T ss_pred EEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCC-CEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHH
Confidence 6888999999999999999999999988754 565554 59999999999999999999999877666776777899999
Q ss_pred HHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCCC--EEEEcCCCcccCCCcEEEEEEeCCEEEEEEE
Q 013914 319 RKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD--TVLFGDNDLASATHKFGTYWIKDGKVVGVFL 396 (434)
Q Consensus 319 ~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~ 396 (434)
..||+.||.||++.. ..|..+|++|+..+++.+..+|.+.+. .+..++.. ...|.+++.++|+|+|+++
T Consensus 306 ~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~G~~~ 376 (431)
T 1q1r_A 306 LEQARKIAAILCGKV-----PRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLA----QPDFSVFYLQGDRVLAVDT 376 (431)
T ss_dssp HHHHHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEETT----TTEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhcCCC-----CCCCCCCeEEEEECCceEEEEeCCCCCCEEEEEccCC----CCeEEEEEEeCCEEEEEEE
Confidence 999999999999753 467789999999999999999976532 33333322 4567888889999999999
Q ss_pred ecCCHHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 013914 397 ESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 397 ~g~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 431 (434)
+|+. .+...+..+|..+.++ +.++|.++.+++.
T Consensus 377 ~g~~-~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 409 (431)
T 1q1r_A 377 VNRP-VEFNQSKQIITDRLPV-EPNLLGDESVPLK 409 (431)
T ss_dssp ESCH-HHHHHHHHHHHTTCCC-CHHHHTCTTSCHH
T ss_pred ECCh-HHHHHHHHHHHCCCCC-CHHHhhCCCCCHH
Confidence 9964 5566677788888877 5668888888764
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.9e-54 Score=415.22 Aligned_cols=392 Identities=27% Similarity=0.428 Sum_probs=323.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||+|||||+||+++|..|++.|. +.+|+|||+++..+|.++.+++.++....... .... +++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-~~~ 70 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGDAEK-------------IRLD-CKR 70 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGG-------------SBCC-CTT
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCchhh-------------hhHH-HHH
Confidence 36899999999999999999999986 34599999998888887776654443211000 0111 456
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCC-CCCCCCCeEEecCHHHHHHHHHHHHhCC
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGV-EGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~~l~~~~ 162 (434)
+.+++++.++.++.++++.++|.+.+++++.||+||+|||++|+.|+ + +|.+ ++++++++.+++..+.+.+. .
T Consensus 71 ~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~---i~~G~~-~~v~~~~~~~~~~~l~~~~~--~ 144 (408)
T 2gqw_A 71 APEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALP---TLQGAT-MPVHTLRTLEDARRIQAGLR--P 144 (408)
T ss_dssp SCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG---GGTTCS-SCEEECCSHHHHHHHHTTCC--T
T ss_pred HCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC---ccCCCC-CcEEEECCHHHHHHHHHHhh--c
Confidence 77999999988999999989999988889999999999999998887 5 6665 78999999999888765443 4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 242 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++ ++ .+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~---~~---~v 218 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV---DG---VV 218 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE---TT---EE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE---CC---EE
Confidence 7899999999999999999999999999999999999876899999999999999999999999999997 23 57
Q ss_pred EeCCCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHH
Q 013914 243 KLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 321 (434)
Q Consensus 243 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~ 321 (434)
++.+|+++++|.||+|+|++|++++++. ++..++| |.||+++||++|+|||+|||+..+.+.++...+++++..|..|
T Consensus 219 ~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~ 297 (408)
T 2gqw_A 219 LLDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQ 297 (408)
T ss_dssp EETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHH
T ss_pred EECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHH
Confidence 7889999999999999999999987754 5666544 9999999999999999999999876656666666799999999
Q ss_pred HHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC-CCEEEEcCCCcccCCCcEEEEEEeCCEEEEEEEecCC
Q 013914 322 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-GDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGT 400 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~ 400 (434)
|+.||.||.+... ..|..+|++|+.+++..+..+|... .+.+..++.. .....|.+++.++++|+|++++|+.
T Consensus 298 g~~aa~~i~g~~~----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~g~~ 371 (408)
T 2gqw_A 298 GIAVARHLVDPTA----PGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVS--LDAPKFTLIELQKGRIVGATCVNNA 371 (408)
T ss_dssp HHHHHHHHHCTTS----CCCCCCCEEEEEETTEEEEEEECSCCSEEEEESCCC--SSSCCEEEEEEETTEEEEEEEESCH
T ss_pred HHHHHHHhcCCCC----CcCCCCCeEEEEECCceEEEECCCCCCEEEEEccCC--CCCCeEEEEEEeCCEEEEEEEECCh
Confidence 9999999997531 2678899999999999999999721 2233333321 1135688888899999999999964
Q ss_pred HHHHHHHHHHHHcCCCCCChhhhhccCCCcc
Q 013914 401 PEENKAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 401 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 431 (434)
.++..+..+|+++.++ +..+|.++.+++.
T Consensus 372 -~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 400 (408)
T 2gqw_A 372 -RDFAPLRRLLAVGAKP-DRAALADPATDLR 400 (408)
T ss_dssp -HHHHHHHHHHHTTCCC-CHHHHHCTTCCHH
T ss_pred -HHHHHHHHHHHCCCCC-ChHHhcCCCCCHH
Confidence 5678999999999988 4567888887754
No 7
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=2e-54 Score=411.77 Aligned_cols=363 Identities=26% Similarity=0.373 Sum_probs=307.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
++.+|||||||+||++||..|.+.+. +|+|||+++..+|.++.+++.+........+ .....++++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~---~itlie~~~~~~y~~~~l~~~l~g~~~~~~l-----------~~~~~~~~~ 73 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCD---DITMINSEKYLPYYRPRLNEIIAKNKSIDDI-----------LIKKNDWYE 73 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCS---CEEEECSSSSCCBCGGGHHHHHHSCCCGGGT-----------BSSCHHHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCC---EEEEEECCCCCCcccChhhHHHcCCCCHHHc-----------cCCCHHHHH
Confidence 46899999999999999999955444 4999999999899888887644322111111 245678888
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCC
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 163 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~ 163 (434)
+.+++++.+++|+.++++.++|.+.+++++.||+||+|||++|+.|+ ++|.+ +++++++.+++..+++.+. .+
T Consensus 74 ~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~---i~G~~--~v~~~~~~~d~~~l~~~l~--~~ 146 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIK---VPHAD--EIFSLYSYDDALKIKDECK--NK 146 (385)
T ss_dssp HTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC---CTTCS--CEECCSSHHHHHHHHHHHH--HH
T ss_pred HCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCC---CCCCC--CeEEeCCHHHHHHHHHHhh--cC
Confidence 99999999999999999999999999999999999999999999887 57765 8999999999999988776 36
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 243 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~ 243 (434)
++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||++++++.++++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------ 214 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------ 214 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc------------
Confidence 89999999999999999999999999999999999998789999999999999999999999887666
Q ss_pred eCCCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHH
Q 013914 244 LKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSA 322 (434)
Q Consensus 244 ~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g 322 (434)
|+++++|.||+|+|++|++++++. ++..++ +|.||+++||+.|+|||+|||+..+.. ...++..|..||
T Consensus 215 ---g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~-gi~vd~~~~t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg 284 (385)
T 3klj_A 215 ---GDLIRSSCVITAVGVKPNLDFIKDTEIASKR-GILVNDHMETSIKDIYACGDVAEFYGK------NPGLINIANKQG 284 (385)
T ss_dssp ---HHHHHHSEEEECCCEEECCGGGTTSCCCBSS-SEEECTTCBCSSTTEEECGGGEEETTB------CCCCHHHHHHHH
T ss_pred ---CeEEecCeEEECcCcccChhhhhhcCCCcCC-CEEECCCcccCCCCEEEEEeeEecCCC------cccHHHHHHHHH
Confidence 557899999999999999988854 555554 499999999999999999999986543 126899999999
Q ss_pred HHHHHHHhccCCCCcccCCCC-CCeeEEeccCceeEEeecCCCC---EEEEcCCCcccCCCcEEEEEEeCCEEEEEEEec
Q 013914 323 EQAVKTIMATEGGKTVTGYDY-LPYFYSRAFDLSWQFYGDNVGD---TVLFGDNDLASATHKFGTYWIKDGKVVGVFLES 398 (434)
Q Consensus 323 ~~aa~~i~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g 398 (434)
+.||+||++.. ..|.. .|++|+++++..+..+|.++++ .+.. +. ....|.++++++|+|+|++++|
T Consensus 285 ~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~l~g~~~~g 354 (385)
T 3klj_A 285 EVAGLNACGED-----ASYSEIIPSPILKVSGISIISCGDIENNKPSKVFR-ST----QEDKYIVCMLKENKIDAAAVIG 354 (385)
T ss_dssp HHHHHHHTTCC-----CCCCCCCCCCEEEETTEEEEEESCCTTCCCSEEEE-EE----CSSCEEEEEEETTEEEEEEEES
T ss_pred HHHHHHhcCCC-----cCCCCCCCcEEEEeCCCcEEEEcCCCCCCCeEEEE-EC----CCCeEEEEEEECCEEEEEEEEC
Confidence 99999999864 45554 6999999999999999987643 2322 22 2567999999999999999999
Q ss_pred CCHHHHHHHHHHHHcCCCCCCh
Q 013914 399 GTPEENKAIAKVARVQPSVESL 420 (434)
Q Consensus 399 ~~~~~~~~~~~~i~~~~~~~~~ 420 (434)
+. .....+..+|+++.+++++
T Consensus 355 ~~-~~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 355 DV-SLGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp CH-HHHHHHHHHHHTTCBCSCC
T ss_pred Cc-HHHHHHHHHHHcCCCcccc
Confidence 65 4445799999999999876
No 8
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=9.1e-54 Score=417.71 Aligned_cols=404 Identities=17% Similarity=0.223 Sum_probs=312.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
+||+|||||+||++||.+|++++. ..+|+|||+++..+|..+.+...+ ... ..... .......+++.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~g~~~~~~~~~~-~~~-~~~~~--------~~~~~~~~~~~~~ 71 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYP-QAEISLIDKQATVGYLSGGLSAYF-NHT-INELH--------EARYITEEELRRQ 71 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCCSSCCC--------------------------CCCCHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCcccCccchhhh-cCC-CCCHH--------HhhcCCHHHHHHC
Confidence 599999999999999999999821 234999999987776544332111 000 00000 0112356778889
Q ss_pred CcEEEcCCeeEEEECCCCEEEcc---CCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCC
Q 013914 86 GIELILSTEIVRADIASKTLLSA---TGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~---~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~ 162 (434)
+++++.+++|+.++++.+.+.+. ++.++.||++|+|||++|..|+ ++|.+..++++++++.+...+.+... .
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~~--~ 146 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQ---IRGSQTEKLLKYKFLSGALAAVPLLE--N 146 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCC---CBTTTCTTEEEGGGCC----CCHHHH--T
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHh--c
Confidence 99999999999999999887652 5567999999999999999887 57777788998887777666555444 5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 242 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v 242 (434)
+++++|||+|++|+|+|..+.+.|.+|+++++.+++++..+++++.+.+.+.+++.||+++++++|++++. .++.+ .+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v 224 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VL 224 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EE
Confidence 79999999999999999999999999999999999998768999999999999999999999999999986 34454 77
Q ss_pred EeCCCcEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHH
Q 013914 243 KLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 321 (434)
Q Consensus 243 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~ 321 (434)
.+++| ++++|.|++|+|++|++++++..+.. .+|+|.||+++||++|+|||+|||+..+....+...+.+++..|..|
T Consensus 225 ~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~ 303 (452)
T 3oc4_A 225 ETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRT 303 (452)
T ss_dssp EESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHH
T ss_pred EECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHH
Confidence 78777 89999999999999999988666555 67899999999999999999999999876655655556789999999
Q ss_pred HHHHHHHHhccCCCCcccCCC-CCCeeEEeccCceeEEeecCCCC------EEE---EcC--CCcccCCCcEEEEEE--e
Q 013914 322 AEQAVKTIMATEGGKTVTGYD-YLPYFYSRAFDLSWQFYGDNVGD------TVL---FGD--NDLASATHKFGTYWI--K 387 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~g~~~~~------~~~---~~~--~~~~~~~~~~~~~~~--~ 387 (434)
|+.||.||++.. ..+. ..+...+.+|+..+..+|+++.+ .+. +.. ......+.+|+|+++ +
T Consensus 304 g~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~~~ 378 (452)
T 3oc4_A 304 GLVVANNLEEKT-----HRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYDKV 378 (452)
T ss_dssp HHHHTTSSSSCC-----CCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEETT
T ss_pred HHHHHHHhcCCC-----ccCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEECC
Confidence 999999998753 2222 22344556677778888987632 111 111 111123567899888 4
Q ss_pred CCEEEEEEEecC-CHHHH-HHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013914 388 DGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 388 ~~~ilG~~~~g~-~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~~~~~~ 433 (434)
+++|||+|++|+ ++.++ +.++.||++++|++|+..+ .-+.++|.+.
T Consensus 379 ~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~ 427 (452)
T 3oc4_A 379 TQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNI 427 (452)
T ss_dssp TCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCS
T ss_pred CCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCc
Confidence 599999999999 68775 9999999999999988877 4677777654
No 9
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.2e-53 Score=419.38 Aligned_cols=413 Identities=24% Similarity=0.274 Sum_probs=302.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCC-CCCCCCcccccCCCCCCCChhhHh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG-TARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
++||+|||||+||+++|..|++++ +..+|+|||+++..+|.++.+...+..... ...+..+.. ......+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~-~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~ 76 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD-PEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPY-----NVVRDPEFFR 76 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC-TTSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC-cCCCEEEEECCCcccccccccchhhcCCCCchHHhccccc-----hhccCHHHHh
Confidence 579999999999999999999982 123499999999877766543321110000 000000000 0112233333
Q ss_pred -hcCcEEEcCCeeEEEECCCCEEEccC---Cc--EEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHH
Q 013914 84 -EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEA 157 (434)
Q Consensus 84 -~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 157 (434)
+.+++++.+++|+.++++.+.+.+.+ +. .+.||++|+|||++|+.|+ ++|.+.++++++.+..++..+.+.
T Consensus 77 ~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~~ 153 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPP---VEGMDLAGVTPVTNLDEAEFVQHA 153 (472)
T ss_dssp ----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCS---CTTTTSBTEEECCSHHHHHHHHHH
T ss_pred hhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCC---CCCCCCCCEEEeCCHHHHHHHHHH
Confidence 57899999999999999999887754 55 7899999999999998887 577766789999999998888776
Q ss_pred HHhCCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013914 158 IKAKKNGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 158 l~~~~~~~v~ViG~g~~~~e~a~~l~~~-g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~ 236 (434)
+....+++++|||+|++|+|+|..+.+. |.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++. ++
T Consensus 154 l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~ 232 (472)
T 3iwa_A 154 ISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-EN 232 (472)
T ss_dssp CCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SS
T ss_pred hhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cC
Confidence 6544579999999999999999999999 999999999999998558999999999999999999999999999987 34
Q ss_pred CcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceeccc
Q 013914 237 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEH 314 (434)
Q Consensus 237 g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~ 314 (434)
+.+ .+.+.+|+++++|.||+|+|++|+++++.. ++.. ++|+|.||+++||++|+|||+|||+..+....+.+.++++
T Consensus 233 ~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~ 311 (472)
T 3iwa_A 233 GKV-ARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPL 311 (472)
T ss_dssp SBE-EEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCC
T ss_pred CeE-EEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecch
Confidence 444 477888999999999999999999987743 6666 6789999999999999999999999887766666666678
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCE---EEEcCCCcc----cCCCcE
Q 013914 315 VDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT---VLFGDNDLA----SATHKF 381 (434)
Q Consensus 315 ~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~---~~~~~~~~~----~~~~~~ 381 (434)
+..|..||+.||+||++... .....+|++++.+++..+..+|+++ |.. ..+....+. ..+.+|
T Consensus 312 ~~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 387 (472)
T 3iwa_A 312 GSMANRQGRVIGTNLADGDA----TFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMT 387 (472)
T ss_dssp TTHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------CEE
T ss_pred HHHHHHHHHHHHHHhcCCCc----cCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEE
Confidence 88999999999999997542 2334567888888898899999875 211 122111111 235678
Q ss_pred EEEEE--eCCEEEEEEEecC---CHHH-HHHHHHHHHcCCCCCChhhhhccC-CCccc
Q 013914 382 GTYWI--KDGKVVGVFLESG---TPEE-NKAIAKVARVQPSVESLDVLKNEG-LSFAS 432 (434)
Q Consensus 382 ~~~~~--~~~~ilG~~~~g~---~~~~-~~~~~~~i~~~~~~~~~~~l~~~~-~~~~~ 432 (434)
+|+++ ++++|||+|++|+ .+.+ ++.++.||++++|++|+..+.-+. ++|.+
T Consensus 388 ~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~ 445 (472)
T 3iwa_A 388 LQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFAS 445 (472)
T ss_dssp EEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC-------
T ss_pred EEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCC
Confidence 89888 5799999999999 3356 599999999999999666554443 44443
No 10
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.5e-53 Score=414.43 Aligned_cols=405 Identities=20% Similarity=0.243 Sum_probs=311.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH-h
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-K 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 83 (434)
++||+|||||+||+++|..|++.+. ..+|+|||+++...+..+.+...+........ ......+++ +
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~-----------~~~~~~~~~~~ 70 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPYVVEGLSTPDK-----------LMYYPPEVFIK 70 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-----------------------------------CTHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCccccCCCCCHHH-----------hhhcCHHHHHH
Confidence 5899999999999999999999842 34499999998765543322211100000000 011223344 6
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCC-cEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCC
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~ 162 (434)
+.+++++.+++++.++.+.+.+.+.++ .++.||+||+|||++|+.|+ ++|.+.+++++.++..+...+.+.+....
T Consensus 71 ~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 147 (449)
T 3kd9_A 71 KRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPA---IEGVNLKGVFTADLPPDALAIREYMEKYK 147 (449)
T ss_dssp HTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCS---CBTTTSTTEECSCSTHHHHHHHHHHSSSC
T ss_pred hcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHHhcC
Confidence 789999999999999988888888777 48999999999999998887 67777778998888888888888776556
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 242 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.+++. |++++++.+.+++. ++.+..+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~--~~~v~~v 224 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEG--EERVEKV 224 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEEC--SSSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEec--cCcEEEE
Confidence 78999999999999999999999999999999999998768999999999999999 99999999999986 3333333
Q ss_pred EeCCCcEEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHH
Q 013914 243 KLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARK 320 (434)
Q Consensus 243 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~ 320 (434)
+.+++++++|.|++|+|++|++++++. ++.. ++|+|.||+++||++|+|||+|||+..+....+.+.+++++..|..
T Consensus 225 -~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~ 303 (449)
T 3kd9_A 225 -VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNK 303 (449)
T ss_dssp -EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHH
T ss_pred -EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHH
Confidence 456778999999999999999988754 6666 6788999999999999999999999887766666556688999999
Q ss_pred HHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCEEE---EcCCCcc----cCCCcEEEEEEe
Q 013914 321 SAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVL---FGDNDLA----SATHKFGTYWIK 387 (434)
Q Consensus 321 ~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~---~~~~~~~----~~~~~~~~~~~~ 387 (434)
||+.+|+||++... ......|+.+..+++..+..+|+++ |..+. +....+. ..+.+|+|++++
T Consensus 304 ~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~ 379 (449)
T 3kd9_A 304 MGYVAGSNIAGKEL----HFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKGVVD 379 (449)
T ss_dssp HHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCc----cCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEEEEE
Confidence 99999999997542 2223456777888888888889875 22221 1111111 235678898874
Q ss_pred --CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhh-hccCCCccc
Q 013914 388 --DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFAS 432 (434)
Q Consensus 388 --~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~~~~~ 432 (434)
+++|||+|++|+++.++ +.++.||++++|++|+..+ ..+.++|.+
T Consensus 380 ~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~ 428 (449)
T 3kd9_A 380 NETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAP 428 (449)
T ss_dssp TTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBC
T ss_pred CCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCC
Confidence 59999999999998885 9999999999999977655 334444443
No 11
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.8e-53 Score=419.30 Aligned_cols=409 Identities=18% Similarity=0.256 Sum_probs=318.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||+++|..|++.|.+..+|+|||+++..+|..+.+.. ++... ...... ......+++++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~-~~~~~~--------~~~~~~~~~~~ 104 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQ-IAGPEG--------LFYSDKEELES 104 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTS-SSCSGG--------GBSCCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCc-cCCHHH--------hhhcCHHHHHh
Confidence 489999999999999999999987112339999999765554332210 11110 000000 01234567778
Q ss_pred cCcEEEcCCeeEEEECCCCEEEcc-CC--cEEEcceEEEecCCCcccccCCCCCCCC-----------CCCeEEecCHHH
Q 013914 85 KGIELILSTEIVRADIASKTLLSA-TG--LIFKYQILVIATGSTVLRLTDFGVEGAD-----------AKNIFYLREIDD 150 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~-~~--~~~~~d~lvlAtG~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~ 150 (434)
.+++++.++.++.++.+.+++.+. ++ .++.||+||+|||++|+.|+ ++|.+ .+++++++++.+
T Consensus 105 ~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 105 LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPP---IKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCS---CBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCC---CCCccccccccccccccCCEEEeCCHHH
Confidence 899999998999999988888776 53 47999999999999998887 56655 568999999998
Q ss_pred HHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 151 ~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
...+.+.+....+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++
T Consensus 182 ~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 261 (490)
T 2bc0_A 182 SADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKE 261 (490)
T ss_dssp HHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEE
T ss_pred HHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 88887766333689999999999999999999999999999999999998668999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcc
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREM 309 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~ 309 (434)
++. ++.+..+.+ +|+++++|.||+|+|++|++++++..+.. ++|+|.||+++||++|+|||+|||+..+....+..
T Consensus 262 i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~ 338 (490)
T 2bc0_A 262 VAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDT 338 (490)
T ss_dssp EEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEE
T ss_pred EEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCce
Confidence 986 444444555 67899999999999999999987655555 57889999999999999999999999776555555
Q ss_pred eecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCEEE---EcCCCcc-----
Q 013914 310 RRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVL---FGDNDLA----- 375 (434)
Q Consensus 310 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~---~~~~~~~----- 375 (434)
.+++++..|..||+.||.||++... ......|++++.+++..+..+|.++ +..+. +.+..+.
T Consensus 339 ~~~~~~~~A~~qg~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~ 414 (490)
T 2bc0_A 339 NYIALASNAVRTGIVAAHNACGTDL----EGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEH 414 (490)
T ss_dssp ECCCCHHHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCS
T ss_pred eecccHHHHHHHHHHHHHHhcCCCC----CCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCC
Confidence 5567899999999999999987431 2223456777888888888899764 22122 2111111
Q ss_pred cCCCcEEEEEE--eCCEEEEEEEecC-CHHHH-HHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013914 376 SATHKFGTYWI--KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 376 ~~~~~~~~~~~--~~~~ilG~~~~g~-~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~~~~~~ 433 (434)
.....|+|+++ ++++|||++++|+ ++.++ +.++.+|++++|++|+..+ ..+.++|.+.
T Consensus 415 ~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~ 477 (490)
T 2bc0_A 415 GNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKP 477 (490)
T ss_dssp SCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCT
T ss_pred CCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCch
Confidence 12346888877 4799999999999 67775 9999999999999988865 4667776653
No 12
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2.2e-53 Score=415.23 Aligned_cols=406 Identities=20% Similarity=0.302 Sum_probs=318.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+||+|||||+||+++|..|++. |.+ |+|||+++..+|..+.+.. ++... .... .+. .......++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~g~-~~~~-~~~-----~~~~~~~~~~~ 69 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDAD---VTAYEMNDNISFLSCGIAL-YLGKE-IKNN-DPR-----GLFYSSPEELS 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEEESSSCCCBCGGGHHH-HHTTC-BGGG-CGG-----GGBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCcccccchh-hhcCC-cccC-CHH-----HhhhcCHHHHH
Confidence 5899999999999999999998 655 9999999866554332211 11110 0000 000 01123456778
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccC-----CcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHH
Q 013914 84 EKGIELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l 158 (434)
+.+++++.++.++.++.+.+++.+.+ +.++.||++|+|||++|+.|+ ++|.+..++++++++.+...+.+.+
T Consensus 70 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPP---IPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCC---CCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 88999999888999998888887754 457999999999999998887 5776667899999999888887765
Q ss_pred HhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013914 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~ 238 (434)
. .+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++. ++++
T Consensus 147 ~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~ 223 (452)
T 2cdu_A 147 P--KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDE 223 (452)
T ss_dssp G--GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTE
T ss_pred c--cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCe
Confidence 4 579999999999999999999999999999999999998668999999999999999999999999999986 3455
Q ss_pred EEEEEeCCCcEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHH
Q 013914 239 VKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 317 (434)
Q Consensus 239 v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 317 (434)
+..+.+ +|+++++|.||+|+|++|++++++..+.. ++|+|.||+++||++|+|||+|||+..+....+.+.+++++..
T Consensus 224 v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 302 (452)
T 2cdu_A 224 IITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATN 302 (452)
T ss_dssp EEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHH
T ss_pred EEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHH
Confidence 545555 78899999999999999999987655555 5788999999999999999999999987655565555678999
Q ss_pred HHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCEE---EEcCCCcc----cCCCcEEEE
Q 013914 318 ARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTV---LFGDNDLA----SATHKFGTY 384 (434)
Q Consensus 318 A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~---~~~~~~~~----~~~~~~~~~ 384 (434)
|..||+.||+||++.. .....+.|++++.+++..+..+|.++ +..+ .+.+..+. .....|+|+
T Consensus 303 A~~~g~~aa~~i~g~~----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~ 378 (452)
T 2cdu_A 303 AVRQGRLVGLNLTEDK----VKDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSL 378 (452)
T ss_dssp HHHHHHHHHHTSSSCC----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCC----CcCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEE
Confidence 9999999999998742 12233456778888888888999774 2111 12221111 123468888
Q ss_pred EE--eCCEEEEEEEecC-CHHHH-HHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013914 385 WI--KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 385 ~~--~~~~ilG~~~~g~-~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~~~~~~ 433 (434)
++ ++++|||+|++|+ ++.++ +.++.+|++++|++|+..+ ..+.++|.+.
T Consensus 379 ~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~ 432 (452)
T 2cdu_A 379 VYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRP 432 (452)
T ss_dssp EECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCS
T ss_pred EEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCch
Confidence 77 4799999999999 77775 9999999999999988765 4667776653
No 13
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=5.9e-52 Score=416.87 Aligned_cols=398 Identities=22% Similarity=0.300 Sum_probs=316.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH-hh
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-KE 84 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 84 (434)
+||+|||||+||++||.+|++++. ..+|+|||+++..+|.++.+...+....... . .......+++ ++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~-----~-----~~~~~~~~~~~~~ 70 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPYHISGEIAQR-----S-----ALVLQTPESFKAR 70 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHHTSSSCCG-----G-----GGBCCCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchHHhcCCcCCh-----H-----HhhccCHHHHHHh
Confidence 589999999999999999999842 3459999999887776543322111100000 0 0012334444 44
Q ss_pred cCcEEEcCCeeEEEECCCCEEEccC---Cc--EEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHH
Q 013914 85 KGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~ 159 (434)
.+++++.+++|+.++++.+.+.+.+ +. ++.||+||+|||++|+.|+ ++|.+..++++.++..+...+.+.+.
T Consensus 71 ~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---ipG~~~~~v~~~~~~~~~~~l~~~~~ 147 (565)
T 3ntd_A 71 FNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPP---IPGVDNPLTHSLRNIPDMDRILQTIQ 147 (565)
T ss_dssp HCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTCCSTTEECCSSHHHHHHHHHHHH
T ss_pred cCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 7999999999999999999887653 43 7899999999999998887 67877788999999999888887776
Q ss_pred hCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEec-----
Q 013914 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN----- 234 (434)
Q Consensus 160 ~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~----- 234 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||++++++.++++...
T Consensus 148 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~ 226 (565)
T 3ntd_A 148 MNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHV 226 (565)
T ss_dssp HTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCC
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccc
Confidence 667899999999999999999999999999999999999884 89999999999999999999999999999862
Q ss_pred -------------CCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccc
Q 013914 235 -------------ADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVA 299 (434)
Q Consensus 235 -------------~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~ 299 (434)
.++. ..+.+.+|+++++|.||+|+|++|++++++. ++.. ++|+|.||+++||++|+|||+|||+
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 227 ASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGB
T ss_pred cccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeE
Confidence 2333 3567788999999999999999999987744 6666 6789999999999999999999999
Q ss_pred cccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCC-CCeeEEeccCceeEEeecCCCC---------EEEE
Q 013914 300 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDY-LPYFYSRAFDLSWQFYGDNVGD---------TVLF 369 (434)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~g~~~~~---------~~~~ 369 (434)
..+....+.+.+++++..|..||+.||+||++.. ..|.. .|+.++.+++..+..+|+++.+ ...+
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~ 380 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-----ERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYV 380 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEE
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhcCCC-----ccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEE
Confidence 8877666766666889999999999999999754 23443 3455677788888899987521 1222
Q ss_pred cCCCcc----cCCCcEEEEEE--eCCEEEEEEEecCCH-HH-HHHHHHHHHcCCCCCChhhhh
Q 013914 370 GDNDLA----SATHKFGTYWI--KDGKVVGVFLESGTP-EE-NKAIAKVARVQPSVESLDVLK 424 (434)
Q Consensus 370 ~~~~~~----~~~~~~~~~~~--~~~~ilG~~~~g~~~-~~-~~~~~~~i~~~~~~~~~~~l~ 424 (434)
....+. ..+.+|+|+++ ++++|||+|++|+++ .| ++.++.||++++|++||..+.
T Consensus 381 ~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~~l~~~~ 443 (565)
T 3ntd_A 381 HTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQLQHLE 443 (565)
T ss_dssp EEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHHHHTTCC
T ss_pred ecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhhh
Confidence 111111 23567889888 579999999999998 67 599999999999999777654
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=3.6e-51 Score=412.36 Aligned_cols=405 Identities=22% Similarity=0.287 Sum_probs=318.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||+|||||+||++||.+|++.+. ..+|+|||+++..+|..+.+...+...... ... ........+.+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~lp~~~~g~~~~-----~~~----~~~~~~~~~~~ 104 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPYYIGGVITE-----RQK----LLVQTVERMSK 104 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHHTTSSCC-----GGG----GBSSCHHHHHH
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCCchhhcCcCCC-----hHH----hhccCHHHHHH
Confidence 35799999999999999999999831 234999999988777654332211110000 000 00123344556
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEcc---CCc--EEEcceEEEecCCCcccccCCCCCCC-CCCCeEEecCHHHHHHHHHH
Q 013914 84 EKGIELILSTEIVRADIASKTLLSA---TGL--IFKYQILVIATGSTVLRLTDFGVEGA-DAKNIFYLREIDDADKLVEA 157 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~---~~~--~~~~d~lvlAtG~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~ 157 (434)
+.+++++.++.|+.++++.+.+.+. ++. ++.||+||+|||++|+.|+ ++|. +..++++.++..+...+...
T Consensus 105 ~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~~v~~~~~~~~~~~~~~~ 181 (588)
T 3ics_A 105 RFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPS---IPGIEEAKALFTLRNVPDTDRIKAY 181 (588)
T ss_dssp HTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTTTTCTTEEECSSHHHHHHHHHH
T ss_pred hcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCC---CCCcccCCCeEEeCCHHHHHHHHHH
Confidence 7899999999999999999988764 455 7899999999999998887 5776 56789999999999888887
Q ss_pred HHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCC
Q 013914 158 IKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADG 237 (434)
Q Consensus 158 l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g 237 (434)
+....+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.+++.||+++++++|++++.+ ++
T Consensus 182 l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~ 259 (588)
T 3ics_A 182 IDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA 259 (588)
T ss_dssp HHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT
T ss_pred HhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC
Confidence 76557899999999999999999999999999999999999987 89999999999999999999999999999863 22
Q ss_pred cEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccH
Q 013914 238 EVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHV 315 (434)
Q Consensus 238 ~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~ 315 (434)
.+.+.+|+++++|.||+|+|++|++++++. ++.. ++|+|.||+++||++|+|||+|||+..+....+.+.+++++
T Consensus 260 ---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~ 336 (588)
T 3ics_A 260 ---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLA 336 (588)
T ss_dssp ---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCH
T ss_pred ---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccH
Confidence 477889999999999999999999987743 6666 67899999999999999999999998777666666566889
Q ss_pred HHHHHHHHHHHHHHhc-cCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCE---EEEcCCCc----ccCCCcE
Q 013914 316 DHARKSAEQAVKTIMA-TEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT---VLFGDNDL----ASATHKF 381 (434)
Q Consensus 316 ~~A~~~g~~aa~~i~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~---~~~~~~~~----~~~~~~~ 381 (434)
..|..||+.||+||++ .. ......+|+.+..+++..+..+|+++ |.. ..+..... ...+.+|
T Consensus 337 ~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 412 (588)
T 3ics_A 337 WPANRQGRMLADIIHGHTD----SLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVL 412 (588)
T ss_dssp HHHHHHHHHHHHHHTTCCS----SCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEE
T ss_pred HHHHHHHHHHHHHhcCCCc----cccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEE
Confidence 9999999999999997 32 12334567777777788888889875 221 11111111 1245678
Q ss_pred EEEEE--eCCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhhhccC-CCc
Q 013914 382 GTYWI--KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVLKNEG-LSF 430 (434)
Q Consensus 382 ~~~~~--~~~~ilG~~~~g~~-~~~-~~~~~~~i~~~~~~~~~~~l~~~~-~~~ 430 (434)
+|+++ ++++|||+|++|+. +.+ ++.++.||++++|++||..+.-+. ++|
T Consensus 413 ~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~ 466 (588)
T 3ics_A 413 IKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELSYAPPY 466 (588)
T ss_dssp EEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCCCSTTT
T ss_pred EEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhccCCCc
Confidence 89888 57999999999985 666 599999999999999877655433 444
No 15
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=4.8e-52 Score=405.19 Aligned_cols=404 Identities=22% Similarity=0.286 Sum_probs=315.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+||||||||+||+++|..|++. |.+ |+|||+++..+|..+.+.. ++... ..... .......++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~----~~~~~-----~~~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAE---IQWYEKGDFISFLSAGMQL-YLEGK----VKDVN-----SVRYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSE---EEEEESSSSSSBCGGGHHH-HHTTS----SCCGG-----GSBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCe---EEEEECCCccCcccccchh-hhcCc----cCCHH-----HhhcCCHHHHH
Confidence 3899999999999999999998 554 9999999866554332211 11110 00000 01234456777
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccC---Cc--EEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHH
Q 013914 84 EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l 158 (434)
+.+++++.++.++.++.+.+++.+.+ |+ ++.||++|+|||++|+.|+ ++|.+.++++++++.+++..+.+.+
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~~~ 144 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD---IPGKDLDNIYLMRGRQWAIKLKQKT 144 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---STTTTSBSEECCCHHHHHHHHHHHH
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCC---CCCCCCCCeEEECCHHHHHHHHHHh
Confidence 88999999989999999998887754 54 4899999999999998887 5776667799888889888887777
Q ss_pred HhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013914 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~ 238 (434)
....+++++|||+|++|+|+|..+.+.|.+|+++++.++++++.+++++.+.+.+.+++.||+++++++|++++. ++.
T Consensus 145 ~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~ 222 (447)
T 1nhp_A 145 VDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEG--DGR 222 (447)
T ss_dssp TCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSB
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCc
Confidence 543589999999999999999999999999999999999988668999999999999999999999999999986 344
Q ss_pred EEEEEeCCCcEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHH
Q 013914 239 VKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 317 (434)
Q Consensus 239 v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~ 317 (434)
+..+.+ +++++++|.|++|+|++|++++++..+.. .+|+|.||+++||+.|+|||+|||+..+....+.+.++.++..
T Consensus 223 v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 301 (447)
T 1nhp_A 223 VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATN 301 (447)
T ss_dssp CCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHH
T ss_pred EEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHH
Confidence 444555 45689999999999999999887655555 5688999999999999999999999876655555555678999
Q ss_pred HHHHHHHHHHHHhccCCCCcccCC-CCCCeeEEeccCceeEEeecCCC------C--E-EEEcCCCcc----cCCCcEEE
Q 013914 318 ARKSAEQAVKTIMATEGGKTVTGY-DYLPYFYSRAFDLSWQFYGDNVG------D--T-VLFGDNDLA----SATHKFGT 383 (434)
Q Consensus 318 A~~~g~~aa~~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~g~~~~------~--~-~~~~~~~~~----~~~~~~~~ 383 (434)
|..||+.||.||++.. ..+ ...++.+..+++..+..+|.++. . . ..+.+..+. .....|+|
T Consensus 302 A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 376 (447)
T 1nhp_A 302 ARKQGRFAVKNLEEPV-----KPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFK 376 (447)
T ss_dssp HHHHHHHHHHTSSSCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEE
T ss_pred HHHHHHHHHHhhcCCC-----CCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEE
Confidence 9999999999998742 223 34566777888888888897642 1 1 112111111 23456888
Q ss_pred EEEe--CCEEEEEEEecCC-HHH-HHHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013914 384 YWIK--DGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 384 ~~~~--~~~ilG~~~~g~~-~~~-~~~~~~~i~~~~~~~~~~~l-~~~~~~~~~~ 433 (434)
++++ +++|||+|++|+. +.+ ++.++.+|++++|++|+..+ ..+.++|.+.
T Consensus 377 ~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~ 431 (447)
T 1nhp_A 377 LVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKP 431 (447)
T ss_dssp EEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCS
T ss_pred EEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCc
Confidence 8773 7999999999998 777 49999999999999988775 4567777654
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.4e-50 Score=397.68 Aligned_cols=404 Identities=21% Similarity=0.298 Sum_probs=313.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
++||+|||||+||+++|..|++. |.+ |+|||+++..+|..+.+.. ++... ...+.. ......+.+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~----~~~~~~-----l~~~~~~~~ 102 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENAN---VVTLEKGEIYSYAQCGLPY-VISGA----IASTEK-----LIARNVKTF 102 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEECSSSCCSBCGGGHHH-HHTTS----SSCGGG-----GBSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCCCCCCcch-hhcCC----cCCHHH-----hhhcCHHHH
Confidence 46999999999999999999997 554 9999999876665443321 11110 000100 012334555
Q ss_pred -hhcCcEEEcCCeeEEEECCCCEEEccC---Cc--EEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHH
Q 013914 83 -KEKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVE 156 (434)
Q Consensus 83 -~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 156 (434)
+..+++++.++.++.++.+.+++.+.+ ++ ++.||+||+|||++|+.|+ ++|.+..+++++++.+++..+.+
T Consensus 103 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~ 179 (480)
T 3cgb_A 103 RDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPE---WEGRDLQGVHLLKTIPDAERILK 179 (480)
T ss_dssp HHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CBTTTSBTEECCSSHHHHHHHHH
T ss_pred HhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCC---CCCccCCCEEEeCCHHHHHHHHH
Confidence 445999999989999999888887653 65 7999999999999998887 57766678998899999988888
Q ss_pred HHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013914 157 AIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 157 ~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~ 236 (434)
.+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||+++++++|+++.. +
T Consensus 180 ~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~ 256 (480)
T 3cgb_A 180 TLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDMAEYIYKEADKHHIEILTNENVKAFKG--N 256 (480)
T ss_dssp HHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEE--S
T ss_pred HhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHHHHHHHHHHHHcCcEEEcCCEEEEEEc--C
Confidence 776546899999999999999999999999999999999998885 7999999999999999999999999999987 4
Q ss_pred CcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceeccc
Q 013914 237 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEH 314 (434)
Q Consensus 237 g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~ 314 (434)
+.+..+.+++ .++++|.||+|+|++|++++++. ++.. .+|+|.||+++||++|+|||+|||+..+....+.+.++.+
T Consensus 257 ~~v~~v~~~~-~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~ 335 (480)
T 3cgb_A 257 ERVEAVETDK-GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPI 335 (480)
T ss_dssp SBEEEEEETT-EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCC
T ss_pred CcEEEEEECC-CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecch
Confidence 5555566654 58999999999999999987754 5665 5789999999999999999999999877655555555578
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccCC-CCCCeeEEeccCceeEEeecCCC------CEE---EEcCCCcc----cCCCc
Q 013914 315 VDHARKSAEQAVKTIMATEGGKTVTGY-DYLPYFYSRAFDLSWQFYGDNVG------DTV---LFGDNDLA----SATHK 380 (434)
Q Consensus 315 ~~~A~~~g~~aa~~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~g~~~~------~~~---~~~~~~~~----~~~~~ 380 (434)
+..|..||+.||.||++.. ..| .+.++.+..+++..+..+|.++. ..+ .+...... .....
T Consensus 336 ~~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 410 (480)
T 3cgb_A 336 GTTANKQGRLAGLNMLDKR-----RAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPL 410 (480)
T ss_dssp HHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEE
T ss_pred HHHHHHHHHHHHHHhcCCC-----ccCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceE
Confidence 9999999999999998743 233 23345667777888888897642 111 11111111 22456
Q ss_pred EEEEEE--eCCEEEEEEEecCC-HHHH-HHHHHHHHcCCCCCChhhh-hccCCCcccc
Q 013914 381 FGTYWI--KDGKVVGVFLESGT-PEEN-KAIAKVARVQPSVESLDVL-KNEGLSFASK 433 (434)
Q Consensus 381 ~~~~~~--~~~~ilG~~~~g~~-~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~~~~~~ 433 (434)
|+|+++ ++++|||++++|+. +.++ +.++.||++++|++|+..+ ..+.++|.+.
T Consensus 411 ~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~ 468 (480)
T 3cgb_A 411 YLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSV 468 (480)
T ss_dssp EEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred EEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCc
Confidence 888877 47999999999998 8774 9999999999999988775 3466776653
No 17
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.1e-50 Score=380.43 Aligned_cols=352 Identities=24% Similarity=0.372 Sum_probs=277.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.||+|||||+||++||..|++.| + |+|||+++..+|.++.+++.+..... +. .......+++++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~---V~lie~~~~~~~~~~~l~~~~~g~~~------~~-----~~~~~~~~~~~~~ 73 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-E---VTVIDKEPVPYYSKPMLSHYIAGFIP------RN-----RLFPYSLDWYRKR 73 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-E---EEEECSSSSCCCCSTTHHHHHTTSSC------GG-----GGCSSCHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-C---EEEEECCCCCccccchhHHHHhCCCC------HH-----HhccCCHHHHHhC
Confidence 58999999999999999999887 5 99999998877777666543211100 00 0123456778888
Q ss_pred CcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCc
Q 013914 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 165 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~ 165 (434)
+++++.++.++.+++..++|. .+++++.||+||||||++|+.|+ ++| .++++++++..++..+.+.+. ++++
T Consensus 74 ~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~---i~G--~~~v~~~~~~~~~~~l~~~~~--~~~~ 145 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQ---IKG--KEYLLTLRTIFDADRIKESIE--NSGE 145 (367)
T ss_dssp TEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECCCC---SBT--GGGEECCCSHHHHHHHHHHHH--HHSE
T ss_pred CcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCCCC---CCC--cCCEEEEcCHHHHHHHHHHhh--cCCc
Confidence 999999988999999988888 67788999999999999998887 566 356888889999988877764 2589
Q ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013914 166 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK 245 (434)
Q Consensus 166 v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~ 245 (434)
++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.+.+++.||+++++++|++++. ..+.++
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~------~~v~~~ 217 (367)
T 1xhc_A 146 AIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANE------EGVLTN 217 (367)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECS------SEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe------eEEEEC
Confidence 99999999999999999999999999999999988 7999999999999999999999999999963 147788
Q ss_pred CCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHH
Q 013914 246 DGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 324 (434)
Q Consensus 246 ~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~ 324 (434)
+|+ +++|.|++|+|++||+++++. ++..+ ++|.||+++||+.|+|||+|||+..... ...++..|..||+.
T Consensus 218 ~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg~~ 289 (367)
T 1xhc_A 218 SGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGI------IAGTAKAAMEQARV 289 (367)
T ss_dssp TEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTB------CCCSHHHHHHHHHH
T ss_pred CCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCC------CccHHHHHHHHHHH
Confidence 887 999999999999999987643 55555 4599999999999999999999975321 11578899999999
Q ss_pred HHHHHhccCCCCcccCCCCC-CeeEEeccCceeEEeecCCCCEEEEcCCCcccCCCcEEEEEEeCCEEEEEEEecCCHHH
Q 013914 325 AVKTIMATEGGKTVTGYDYL-PYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEE 403 (434)
Q Consensus 325 aa~~i~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilG~~~~g~~~~~ 403 (434)
||+||.+.. ..|... |+.+..+++..+..+|.++.+.... ..|+|+++++++|+|++++|+.+ +
T Consensus 290 aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~---------~~~~k~~~~~~~ilG~~~~g~~~-~ 354 (367)
T 1xhc_A 290 LADILKGEP-----RRYNFKFRSTVFKFGKLQIAIIGNTKGEGKWI---------EDNTKVFYENGKIIGAVVFNDIR-K 354 (367)
T ss_dssp HHHHHTTCC-----CCCCSSCCEEEEEETTEEEEEEECCSSCEEEE---------ETTEEEEC-----CEEEEESCHH-H
T ss_pred HHHHhcCCC-----ccCCCCCCceEEEECCceEEEECCCCCCCccc---------ceEEEEEEECCEEEEEEEECChH-H
Confidence 999998753 345544 4444577888888999887643221 46889888889999999999754 3
Q ss_pred HHHHHHHH
Q 013914 404 NKAIAKVA 411 (434)
Q Consensus 404 ~~~~~~~i 411 (434)
...+..+|
T Consensus 355 ~~~~~~~i 362 (367)
T 1xhc_A 355 ATKLEKEI 362 (367)
T ss_dssp HHHHC---
T ss_pred HHHHHHHH
Confidence 44444443
No 18
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.4e-49 Score=378.67 Aligned_cols=366 Identities=22% Similarity=0.308 Sum_probs=286.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
+.++||+|||||+||+++|..|++.|. ..+|+++|++....|.++.++..+........+ .......++
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~ 70 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSKNKDADGL----------AMAEPGAMA 70 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTTTCCHHHH----------EEECHHHHH
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhCCCCHHHh----------hccCHHHHH
Confidence 346899999999999999999999885 345999999876556555444322111000000 001234456
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCC
Q 013914 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~ 162 (434)
++.+++++.++.+..++.+.+++.+.+ .++.||++|+|||+.|+.|+ ++|.+..++++.+++.++..+.+.+. .
T Consensus 71 ~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~~--~ 144 (384)
T 2v3a_A 71 EQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVP---VEGDAQDALYPINDLEDYARFRQAAA--G 144 (384)
T ss_dssp HHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEECCCC---CBSTTTTCEEECSSHHHHHHHHHHHT--T
T ss_pred HhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCC---CCCcCcCCEEEECCHHHHHHHHHhhc--c
Confidence 778999999888999998888888764 47999999999999998877 57766578999999999888877775 4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 242 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v 242 (434)
+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.+++.||+++++++|.+++.+++ ...+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v 222 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEA 222 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEE
Confidence 79999999999999999999999999999999999988767999999999999999999999999999987322 3578
Q ss_pred EeCCCcEEECCEEEEcccCccChhhhh-ccccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHH
Q 013914 243 KLKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 321 (434)
Q Consensus 243 ~~~~g~~~~~D~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~ 321 (434)
.+.+|+++++|.|++|+|++|++++++ .++..++| |.||+++||+.|+|||+|||+..... ..+++..|..|
T Consensus 223 ~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~------~~~~~~~a~~~ 295 (384)
T 2v3a_A 223 HLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGL------NLLYVMPLMAC 295 (384)
T ss_dssp EETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTB------CCCSHHHHHHH
T ss_pred EECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCC------CcchHHHHHHH
Confidence 888999999999999999999998764 36666656 99999999999999999999975322 12578889999
Q ss_pred HHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCCC---EEEEcCCCcccCCCcEEEEEE-eCCEEEEEEEe
Q 013914 322 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---TVLFGDNDLASATHKFGTYWI-KDGKVVGVFLE 397 (434)
Q Consensus 322 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~ilG~~~~ 397 (434)
|+.+|+||++.. ....|..+|+++.+ +++.+...|..... ....++ ..+|.+++. ++++|+|++++
T Consensus 296 g~~~a~~i~g~~---~~~~~~~~p~~~~~-~~~~~~~~g~~~~~~~~~~~~~~------~~g~~~~~~~~~~~i~G~~~~ 365 (384)
T 2v3a_A 296 ARALAQTLAGNP---SQVAYGPMPVTVKT-PACPLVVSPPPRGMDGQWLVEGS------GTDLKVLCRDTAGRVIGYALT 365 (384)
T ss_dssp HHHHHHHHTTCC---CCCCCCCCCEEECC-TTSCEEEECCCTTCCCEEEEEEE------TTEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHhcCCC---ccCCCCCcceEEEE-CCeeEEEecCCCCCCceEEEEec------CCcEEEEEEccCCEEEEEEEE
Confidence 999999999753 22456677876544 34566667765432 222222 346777777 48999999999
Q ss_pred cCCHHHH
Q 013914 398 SGTPEEN 404 (434)
Q Consensus 398 g~~~~~~ 404 (434)
|++++|+
T Consensus 366 g~~a~e~ 372 (384)
T 2v3a_A 366 GAAVNEK 372 (384)
T ss_dssp GGGGGGH
T ss_pred CcchHHH
Confidence 9999986
No 19
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=1.7e-49 Score=390.63 Aligned_cols=405 Identities=23% Similarity=0.342 Sum_probs=308.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCC-----CCCCcc-----cccCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTA-----RLPGFH-----VCVGS 72 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~ 72 (434)
+.++||||||||+||++||..|++.+. ..+|+|||+++..+|.+|++++.++...... .+.++. .....
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 346899999999999999999998742 3459999999988999988888776543210 000000 00000
Q ss_pred C-CCCCChhh--HhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCC----CCCeEEe
Q 013914 73 G-GERLLPEW--YKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD----AKNIFYL 145 (434)
Q Consensus 73 ~-~~~~~~~~--~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~----~~~v~~~ 145 (434)
. .......+ +.+.+++++.++.|+.++++.++|.+.+|+++.||+||||||++|+.++. ++.. ..+++++
T Consensus 88 ~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~---~~~~~~~~~~~v~~~ 164 (493)
T 1m6i_A 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSA---IDRAGAEVKSRTTLF 164 (493)
T ss_dssp GGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHH---HHTSCHHHHHTEEEC
T ss_pred hHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCC---cccccccccCceEEE
Confidence 0 00000111 12468999999999999999999999999899999999999999987663 3211 2468888
Q ss_pred cCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHh----CCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcE
Q 013914 146 REIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKI----NNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIK 221 (434)
Q Consensus 146 ~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~----~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 221 (434)
++..++..+.+.+. .+++++|||+|++|+|+|..|.+ .|.+|+++++.+.++++.+++++.+.+.+.++++||+
T Consensus 165 ~~~~d~~~l~~~~~--~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~ 242 (493)
T 1m6i_A 165 RKIGDFRSLEKISR--EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVK 242 (493)
T ss_dssp CSHHHHHHHHHHHH--HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCE
T ss_pred cCHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCE
Confidence 89999888877665 47899999999999999999887 5789999999888887778999999999999999999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-ccccc--CCcEEeCCCCCCCCCcEEEeccc
Q 013914 222 IIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAEN--KGGIETDDFFKTSADDVYAVGDV 298 (434)
Q Consensus 222 ~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~--~g~i~vd~~~~t~~~~iya~GD~ 298 (434)
+++++.|++++.+ ++. ..+.+.+|+++++|.||+|+|.+||+++++. ++..+ +|+|.||++||| .|+|||+|||
T Consensus 243 v~~~~~V~~i~~~-~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~ 319 (493)
T 1m6i_A 243 VMPNAIVQSVGVS-SGK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDA 319 (493)
T ss_dssp EECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGG
T ss_pred EEeCCEEEEEEec-CCe-EEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeee
Confidence 9999999999862 333 4688899999999999999999999988754 56664 589999999998 6999999999
Q ss_pred ccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEecc-CceeEEeecCCCCEEEEc-------
Q 013914 299 ATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAF-DLSWQFYGDNVGDTVLFG------- 370 (434)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~g~~~~~~~~~~------- 370 (434)
+..+....+.. ++++|..|..||+.||.||++.. .+|...|++|+.++ +..+..+|.........|
T Consensus 320 a~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~-----~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~ 393 (493)
T 1m6i_A 320 ACFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAA-----KPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATA 393 (493)
T ss_dssp EEEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCC-----CCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCT
T ss_pred EeccCcccCcc-ccchHHHHHHHHHHHHHHhcCCC-----CCcCCcCceeeeeccCcceEEEeccCCCcceEEeeccccc
Confidence 99776544443 55789999999999999999753 67889999999986 455555553210000000
Q ss_pred ------------------------------------CCC--c-ccCCCcEEEEEEeCCEEEEEEEecCCHHHHHHHHHHH
Q 013914 371 ------------------------------------DND--L-ASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVA 411 (434)
Q Consensus 371 ------------------------------------~~~--~-~~~~~~~~~~~~~~~~ilG~~~~g~~~~~~~~~~~~i 411 (434)
+.+ . .....+|..+++++|+|+|+.++|. ..++..+..+|
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~li 472 (493)
T 1m6i_A 394 QDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNI-FNRMPIARKII 472 (493)
T ss_dssp TCSHHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEEESC-CSCHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEEecC-cchHHHHHHHH
Confidence 000 0 0012345678889999999999984 56788899999
Q ss_pred HcCCCCCChhhh
Q 013914 412 RVQPSVESLDVL 423 (434)
Q Consensus 412 ~~~~~~~~~~~l 423 (434)
+.+.++.++..+
T Consensus 473 ~~~~~~~~~~~~ 484 (493)
T 1m6i_A 473 KDGEQHEDLNEV 484 (493)
T ss_dssp HHCCBCSCSTTG
T ss_pred hCCCCCCCHHHH
Confidence 999999888765
No 20
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.4e-49 Score=392.56 Aligned_cols=399 Identities=20% Similarity=0.249 Sum_probs=289.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC----CCCccCccccCCCC-------CCC---CCCccc
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY----ERPALSKAYLFPEG-------TAR---LPGFHV 68 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~----~~~~~~~~~~~~~~-------~~~---~~~~~~ 68 (434)
++++||+|||||++|+++|.+|++.|.+ |+|||+++..+- ..+..++.++.... ... ++.+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGR---QLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 4568999999999999999999999886 999999873210 01111121110000 000 000000
Q ss_pred c------cCCCCCCCCh---hhH-----hhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCC
Q 013914 69 C------VGSGGERLLP---EWY-----KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 69 ~------~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~ 134 (434)
. .......... .++ ++.+++++....+..++. +++.+. +..+.||++|+|||+.|..|+ +
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~p~---i 191 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGTLD---V 191 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCCCC---S
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCCCC---C
Confidence 0 0000000022 455 677899983347787775 567665 678999999999999998887 5
Q ss_pred CCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHH
Q 013914 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+..++++.. ++. +.++..++++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 192 ~G~~~~~v~~~~---~~~---~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 264 (523)
T 1mo9_A 192 PGVNAKGVFDHA---TLV---EELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDR 264 (523)
T ss_dssp TTTTSBTEEEHH---HHH---HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHH
T ss_pred CCcccCcEeeHH---HHH---HHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHH
Confidence 776655676443 322 1122222399999999999999999999999999999999999986 799999999999
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcE--EEEEeCCCc-EEECCEEEEcccCccChh-hhh-ccccc-cCCcEEeCCCCCCC
Q 013914 215 YANKGIKIIKGTVAVGFTTNADGEV--KEVKLKDGR-TLEADIVVVGVGGRPLIS-LFK-GQVAE-NKGGIETDDFFKTS 288 (434)
Q Consensus 215 l~~~GV~~~~~~~v~~i~~~~~g~v--~~v~~~~g~-~~~~D~vi~a~G~~p~~~-~~~-~~~~~-~~g~i~vd~~~~t~ 288 (434)
+++.||+++++++|+++..++++.+ ..+++.+|+ ++++|.||+|+|++|+++ +++ .++.. ++|+|.||+++||+
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~ 344 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTS 344 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCS
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccC
Confidence 9999999999999999987445543 467788887 899999999999999998 564 46776 57889999999999
Q ss_pred CCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC-----
Q 013914 289 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV----- 363 (434)
Q Consensus 289 ~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~----- 363 (434)
+|+|||+|||++.+ ..+..|..||+.||.||++... ...+..+|+++++.++ +..+|.++
T Consensus 345 ~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~~~--~a~vG~~e~~a~~ 409 (523)
T 1mo9_A 345 VPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEKI---SYTPKNYPDFLHTHYE--VSFLGMGEEEARA 409 (523)
T ss_dssp STTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCCC---CCCCCSCCEEEESSSE--EEEEECCHHHHHH
T ss_pred CCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCC---CCCCCCCCeEEECCCc--eEEEeCCHHHHHh
Confidence 99999999999764 4567799999999999997431 1346778887776554 55557654
Q ss_pred -CCEEEEcC--C-C----------------c---c--cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCC
Q 013914 364 -GDTVLFGD--N-D----------------L---A--SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQP 415 (434)
Q Consensus 364 -~~~~~~~~--~-~----------------~---~--~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~ 415 (434)
|..+.... . . + . ....+|+|+++ ++++|||+|++|+.+.++ +.++.||++++
T Consensus 410 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 489 (523)
T 1mo9_A 410 AGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGL 489 (523)
T ss_dssp TTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 22222211 1 1 0 0 23457899888 479999999999998875 99999999999
Q ss_pred CCCChhhh--hccCCCccc
Q 013914 416 SVESLDVL--KNEGLSFAS 432 (434)
Q Consensus 416 ~~~~~~~l--~~~~~~~~~ 432 (434)
|++|+..+ .-+.+++.+
T Consensus 490 t~~~l~~~~~~~~~Pt~~e 508 (523)
T 1mo9_A 490 TVDELGDMDELFLNPTHFI 508 (523)
T ss_dssp BHHHHHTSCCCSSCSCCHH
T ss_pred CHHHHHhCCcceECCCHHH
Confidence 99988776 555555543
No 21
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-50 Score=391.69 Aligned_cols=400 Identities=16% Similarity=0.226 Sum_probs=287.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CCCccCccccCCC----CCCCCCCccccc------
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ERPALSKAYLFPE----GTARLPGFHVCV------ 70 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~------ 70 (434)
+++||+|||||+||+++|..|++.|.+ |+|||++...+- ..|..++.++... .......+....
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAK---TLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCc---EEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 468999999999999999999999887 999999853110 0011111111000 000000000000
Q ss_pred -CCC-CC---------------CCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCc--EEEcceEEEecCCCcccc-c
Q 013914 71 -GSG-GE---------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVLRL-T 130 (434)
Q Consensus 71 -~~~-~~---------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~~~-~ 130 (434)
... .. ......+++.+++++.+ .+..++.....+...+++ ++.||+||+|||++|..| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCC
Confidence 000 00 01123345678999987 566665544455556665 799999999999999887 6
Q ss_pred CCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHH
Q 013914 131 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAF 210 (434)
Q Consensus 131 ~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~ 210 (434)
++|.+ .+ .+..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.
T Consensus 166 ---i~g~~--~~---~~~~~~~~l----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 231 (479)
T 2hqm_A 166 ---IPGFE--LG---TDSDGFFRL----E-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNT 231 (479)
T ss_dssp ---STTGG--GS---BCHHHHHHC----S-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHH
T ss_pred ---CCCcc--cc---cchHHHhcc----c-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHH
Confidence 46542 12 233444332 1 25799999999999999999999999999999999999886 89999999
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC-cEEECCEEEEcccCccChhh-hh-ccccc-cCCcEEeCCCCC
Q 013914 211 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-RTLEADIVVVGVGGRPLISL-FK-GQVAE-NKGGIETDDFFK 286 (434)
Q Consensus 211 ~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g-~~~~~D~vi~a~G~~p~~~~-~~-~~~~~-~~g~i~vd~~~~ 286 (434)
+.+.+++.||+++++++|++++.++++.+..+.+.+| +++++|.|++|+|++||+.+ ++ .++.. ++|+|.||+++|
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~ 311 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQN 311 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCB
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCc
Confidence 9999999999999999999998744443457888899 78999999999999999965 43 46666 578999999999
Q ss_pred CCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCC-CCcccCCCCCCeeEEeccCceeEEeecCC--
Q 013914 287 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG-GKTVTGYDYLPYFYSRAFDLSWQFYGDNV-- 363 (434)
Q Consensus 287 t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-- 363 (434)
|++|+|||+|||++.+ .++..|..||+.||.||++... ......|..+|+..++.+++..+ |+++
T Consensus 312 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v--Gl~e~~ 379 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSI--GISEKE 379 (479)
T ss_dssp CSSTTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEE--ECCHHH
T ss_pred cCCCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEE--eCCHHH
Confidence 9999999999998643 5678899999999999997531 01125666788776665555544 6543
Q ss_pred -----C-CEEEE-----cCCCc---ccCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhcc
Q 013914 364 -----G-DTVLF-----GDNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNE 426 (434)
Q Consensus 364 -----~-~~~~~-----~~~~~---~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~ 426 (434)
+ ..+.. ....+ ...+..|+|+++ ++++|||+|++|+++.++ +.++.||++++|++|+..+.-+
T Consensus 380 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~ 459 (479)
T 2hqm_A 380 AIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAI 459 (479)
T ss_dssp HHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCC
T ss_pred HHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCC
Confidence 2 11111 11111 123567899888 479999999999998885 9999999999999988887777
Q ss_pred CCCcccc
Q 013914 427 GLSFASK 433 (434)
Q Consensus 427 ~~~~~~~ 433 (434)
.+++++.
T Consensus 460 hPt~~e~ 466 (479)
T 2hqm_A 460 HPTSAEE 466 (479)
T ss_dssp SSCSGGG
T ss_pred CCChHHH
Confidence 7777654
No 22
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.3e-50 Score=398.47 Aligned_cols=395 Identities=19% Similarity=0.221 Sum_probs=273.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC------CC------CCccCccccCCCCCC-----CCCCcc
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP------YE------RPALSKAYLFPEGTA-----RLPGFH 67 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~------~~------~~~~~~~~~~~~~~~-----~~~~~~ 67 (434)
.||+||||+|+||++||.+++++|.+ |+|||+..... +. .|.++|.++...... ....+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~k---ValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGAR---VLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC---EEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 38999999999999999999999988 99999765311 11 122344433221100 000010
Q ss_pred cccCC---C--------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEc--c----CCcEEEcceEEEecCC
Q 013914 68 VCVGS---G--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLS--A----TGLIFKYQILVIATGS 124 (434)
Q Consensus 68 ~~~~~---~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~--~----~~~~~~~d~lvlAtG~ 124 (434)
..... + ........+++.+++++.+.. .-++ .+++.. . ++++++++++|||||+
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a-~f~~--~~~v~V~~~~~~~~~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLA-KLKD--KNTVSYYLKGDLSKEETVTGKYILIATGC 195 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEE-EEEE--TTEEEEEEC--CCCEEEEEEEEEEECCCE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeE-EEcC--CCcceEeecccCCceEEEeeeeEEeccCC
Confidence 00000 0 000122335567999998743 3333 444432 2 3357999999999999
Q ss_pred CcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCC
Q 013914 125 TVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFT 204 (434)
Q Consensus 125 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~ 204 (434)
+|..|+. +++ +...++ +.+++..+. ..|++++|||+|++|+|+|..|+++|.+||++.+ +++++. +|
T Consensus 196 ~P~~P~~--~~~-~~~~~~---ts~~~l~l~-----~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~~-~D 262 (542)
T 4b1b_A 196 RPHIPDD--VEG-AKELSI---TSDDIFSLK-----KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRG-FD 262 (542)
T ss_dssp EECCCSS--SBT-HHHHCB---CHHHHTTCS-----SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSSTT-SC
T ss_pred CCCCCCc--ccC-CCcccc---Cchhhhccc-----cCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-cccccc-cc
Confidence 9998864 222 212233 333333221 1589999999999999999999999999999987 466775 79
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc---cccc-cCCc-E
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG---QVAE-NKGG-I 279 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~---~~~~-~~g~-i 279 (434)
+++.+.+.+.|++.||++++++.+.++...+ ....+.+.+++++++|.|++|+|++||++.+.. ++.. ..++ |
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i 340 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKI 340 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceE
Confidence 9999999999999999999999999998733 335688889989999999999999999997743 4555 3344 6
Q ss_pred EeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEe
Q 013914 280 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFY 359 (434)
Q Consensus 280 ~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 359 (434)
.+|+++||++|+|||+|||++... .+...|..+|+.++.|+++... ....|..+|++.++.|+++.+
T Consensus 341 ~vd~~~~Ts~p~IyAiGDv~~~~p---------~La~~A~~eg~~aa~~i~g~~~--~~~d~~~iP~~vft~PeiA~V-- 407 (542)
T 4b1b_A 341 IADHLSCTNIPSIFAVGDVAENVP---------ELAPVAIKAGEILARRLFKDSD--EIMDYSYIPTSIYTPIEYGAC-- 407 (542)
T ss_dssp CCCTTSBCSSTTEEECTTSBTTCC---------CCHHHHHHHHHHHHHHHHSCCC--CCCCCSSCCEEECSSSCEEEE--
T ss_pred eccccccccCCCeEEeccccCCch---------hHHHHHHHHHHHHHHHHhcCCC--cccCCCCCceEEeCCCCeEEE--
Confidence 889999999999999999996532 3566788999999999998643 236788899998888877666
Q ss_pred ecCCCC----------EEEEcCC-C--------------------cccCCCcEEEEEE---eCCEEEEEEEecCCHHHH-
Q 013914 360 GDNVGD----------TVLFGDN-D--------------------LASATHKFGTYWI---KDGKVVGVFLESGTPEEN- 404 (434)
Q Consensus 360 g~~~~~----------~~~~~~~-~--------------------~~~~~~~~~~~~~---~~~~ilG~~~~g~~~~~~- 404 (434)
|+++.+ .+..... . ....+.+|+|+++ ++++|||+|++|++++|+
T Consensus 408 GlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI 487 (542)
T 4b1b_A 408 GYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVT 487 (542)
T ss_dssp ECCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHH
T ss_pred eCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHH
Confidence 665311 1110000 0 0013457888775 479999999999999996
Q ss_pred HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013914 405 KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 405 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~~ 433 (434)
+.++.||++++|++||..+--+.+++++.
T Consensus 488 ~~~alAi~~~~t~~dl~~~i~~HPTlsE~ 516 (542)
T 4b1b_A 488 QGMALALRLKVKKKDFDNCIGIHPTDAES 516 (542)
T ss_dssp HHHHHHHHTCCBHHHHHHC----------
T ss_pred HHHHHHHHcCCCHHHHhccCCcCCCHHHH
Confidence 99999999999999888777777766654
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.6e-48 Score=380.60 Aligned_cols=398 Identities=20% Similarity=0.214 Sum_probs=286.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCccCccccCCC-----------CCCCCC--Cc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPE-----------GTARLP--GF 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~-----------~~~~~~--~~ 66 (434)
.++||+|||||+||+++|..|++.|.+ |+|||+++..+.. .+..++.++... ..+.++ ..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFK---TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEV 81 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCC
Confidence 358999999999999999999999886 9999998642110 011111111100 000000 00
Q ss_pred ccccCC----------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccC-C-cEEEcceEEEecCCCcccccCCCC
Q 013914 67 HVCVGS----------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-G-LIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 67 ~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~-~~~~~d~lvlAtG~~~~~~~~~~~ 134 (434)
...... ........++++.+++++.++ +..++.....+.+.+ + .++.||+||+|||++|+.|+ +
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~---i 157 (474)
T 1zmd_A 82 RLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFP---G 157 (474)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCT---T
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCC---C
Confidence 000000 000011345567799999984 445665444566555 4 57999999999999998887 4
Q ss_pred CCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHH
Q 013914 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+..++++ ..++..+ .. .+++++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++++.+.+.+.
T Consensus 158 ~g~~~~~v~t---~~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 229 (474)
T 1zmd_A 158 ITIDEDTIVS---STGALSL----KK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRI 229 (474)
T ss_dssp CCCCSSSEEC---HHHHTTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHH
T ss_pred CCCCcCcEEc---HHHHhhc----cc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHH
Confidence 5554445553 3333322 11 47899999999999999999999999999999999999844899999999999
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcEEEEE-----eCCCcEEECCEEEEcccCccChhh--h-hccccc-cCCcEEeCCCC
Q 013914 215 YANKGIKIIKGTVAVGFTTNADGEVKEVK-----LKDGRTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFF 285 (434)
Q Consensus 215 l~~~GV~~~~~~~v~~i~~~~~g~v~~v~-----~~~g~~~~~D~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~ 285 (434)
+++.||+++++++|++++.++++.+ .+. ..+++++++|.|++|+|++|++++ + ..++.. .+|+|.||+++
T Consensus 230 l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 308 (474)
T 1zmd_A 230 LQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308 (474)
T ss_dssp HHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTC
T ss_pred HHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCC
Confidence 9999999999999999987433323 344 346678999999999999999986 3 336666 46889999999
Q ss_pred CCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC--
Q 013914 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-- 363 (434)
Q Consensus 286 ~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-- 363 (434)
||+.|+|||+|||+..+ ..+..|..||+.||.||++.. ....|..+|+++++.+ .+..+|.++
T Consensus 309 ~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~--~~a~vG~~e~~ 373 (474)
T 1zmd_A 309 QTKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGA---VHIDYNCVPSVIYTHP--EVAWVGKSEEQ 373 (474)
T ss_dssp BCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCC---CCCCGGGCCEEECSSS--EEEEEECCHHH
T ss_pred ccCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCC---CcCCCCCCCEEEECCC--CeEEEeCCHHH
Confidence 99999999999999754 457789999999999999753 1245677887765444 556668764
Q ss_pred ----CCEEEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013914 364 ----GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 364 ----~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~ 428 (434)
|..+..... .+. ....+|+|++++ +++|||+|++|+++.++ +.++.||++++|++|+..+..+.+
T Consensus 374 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 453 (474)
T 1zmd_A 374 LKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHP 453 (474)
T ss_dssp HHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTT
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCC
Confidence 222222111 111 235679998885 79999999999998885 999999999999998887766666
Q ss_pred Cccc
Q 013914 429 SFAS 432 (434)
Q Consensus 429 ~~~~ 432 (434)
+|.+
T Consensus 454 t~~e 457 (474)
T 1zmd_A 454 TLSE 457 (474)
T ss_dssp CTHH
T ss_pred CHHH
Confidence 6654
No 24
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=8.9e-49 Score=383.73 Aligned_cols=398 Identities=16% Similarity=0.162 Sum_probs=288.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC----CCCccCccccCCCC----------CCCCCCccc
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY----ERPALSKAYLFPEG----------TARLPGFHV 68 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~----~~~~~~~~~~~~~~----------~~~~~~~~~ 68 (434)
++++||+|||||+||+++|..|++.|.+ |+|||+++..+. ..|..++.++.... ......+..
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~---V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~ 78 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYN---VLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFST 78 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHH
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHH
Confidence 3469999999999999999999999987 999997754321 01111111110000 000000000
Q ss_pred ccCC--C---CC--CCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcE--EEcceEEEecCCCcccccCCCCCCCCC
Q 013914 69 CVGS--G---GE--RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLI--FKYQILVIATGSTVLRLTDFGVEGADA 139 (434)
Q Consensus 69 ~~~~--~---~~--~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~--~~~d~lvlAtG~~~~~~~~~~~~g~~~ 139 (434)
.... . .. .....++++.+++++.+ .+..++.....+...++++ +.||+||+|||+.|+.|+ ++|.+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~- 153 (466)
T 3l8k_A 79 VQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLR---LPGVE- 153 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCC---CTTGG-
T ss_pred HHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCC---CCCcc-
Confidence 0000 0 00 11122344568999997 7888887766777777877 999999999999998887 46544
Q ss_pred CCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcC
Q 013914 140 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKG 219 (434)
Q Consensus 140 ~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~G 219 (434)
++ .+..++..+++.+.. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.++
T Consensus 154 -~~---~t~~~~~~~~~~l~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~--- 225 (466)
T 3l8k_A 154 -YC---LTSDDIFGYKTSFRK-LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK--- 225 (466)
T ss_dssp -GS---BCHHHHHSTTCSCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---
T ss_pred -ce---EeHHHHHHHHHHHhh-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---
Confidence 23 344554422212222 4789999999999999999999999999999999999987449999999988876
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeC--CCc--EEECCEEEEcccCccChhh--hhccccc-cCCcEEeCCCCCCCCCcE
Q 013914 220 IKIIKGTVAVGFTTNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPLISL--FKGQVAE-NKGGIETDDFFKTSADDV 292 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~v~~v~~~--~g~--~~~~D~vi~a~G~~p~~~~--~~~~~~~-~~g~i~vd~~~~t~~~~i 292 (434)
|+++++++|+++..++++. ..+.+. +|+ ++++|.|++|+|++|++++ ...++.. ++| |.||+++||++|+|
T Consensus 226 v~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t~~~~I 303 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKTNIPNV 303 (466)
T ss_dssp CCEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBCSSTTE
T ss_pred EEEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccCCCCCE
Confidence 9999999999998743133 347776 676 7999999999999999983 3456776 567 99999999999999
Q ss_pred EEecccccccccccCcceecccHHHHHHHHHHHHHHHhcc--CCCCcccCCCCCCeeEEeccCceeEEeecCC------C
Q 013914 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT--EGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------G 364 (434)
Q Consensus 293 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~ 364 (434)
||+|||++.+ +.+..|..||+.||.||++. ... ...+..+|+..++.++ +..+|.++ |
T Consensus 304 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~--~~~~~~~p~~~~~~~~--~a~vG~te~~a~~~g 369 (466)
T 3l8k_A 304 FATGDANGLA----------PYYHAAVRMSIAAANNIMANGMPVD--YVDVKSIPVTIYTIPS--LSYVGILPSKARKMG 369 (466)
T ss_dssp EECGGGTCSC----------CSHHHHHHHHHHHHHHHHTTTSCCC--CCCSTTSCEEECSSSC--EEEEECCHHHHHHHT
T ss_pred EEEEecCCCC----------ccHhHHHHHHHHHHHHHhCCCCCcc--ccCCCCCcEEEECCCC--eEEecCCHHHHHhCC
Confidence 9999999863 56788999999999999975 321 2466677876655444 45557664 2
Q ss_pred CEEEEcC-----CCcc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 365 DTVLFGD-----NDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 365 ~~~~~~~-----~~~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
..+.... ..+. ....+|+|+++ ++|+|||+|++|+++.++ +.++.||++++|++|+..+.-+.++|.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e 448 (466)
T 3l8k_A 370 IEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNE 448 (466)
T ss_dssp CCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTH
T ss_pred CCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHH
Confidence 2222211 1111 24678999888 469999999999999885 9999999999999998888777777765
No 25
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.4e-49 Score=391.39 Aligned_cols=396 Identities=19% Similarity=0.252 Sum_probs=283.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEe---------CCCCCC---CCCCccCccccCCCCC----CCCCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIIS---------KEAVAP---YERPALSKAYLFPEGT----ARLPG 65 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~~V~vie---------~~~~~~---~~~~~~~~~~~~~~~~----~~~~~ 65 (434)
++++||+|||||+||+++|..|++ .|.+ |+||| ++...+ +..|..++.++..... ...+.
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~ 81 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKR---VAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAG 81 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCe---EEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHh
Confidence 346899999999999999999999 8987 99999 322100 0001111111100000 00000
Q ss_pred cccccCCC----CC---------------CCChhhHhhc-CcEEEcCCeeEEEECCCCEEEcc---C-----CcEEEcce
Q 013914 66 FHVCVGSG----GE---------------RLLPEWYKEK-GIELILSTEIVRADIASKTLLSA---T-----GLIFKYQI 117 (434)
Q Consensus 66 ~~~~~~~~----~~---------------~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~---~-----~~~~~~d~ 117 (434)
+.+..... .. ......+++. +++++.+ .+..++ .++|.+. + ++++.||+
T Consensus 82 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~--~~~v~v~~~~~~~~~~~~~~~~d~ 158 (495)
T 2wpf_A 82 FGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLG-WGSLES--KNVVVVRETADPKSAVKERLQADH 158 (495)
T ss_dssp TTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEES-EEEEEE--TTEEEEESSSSTTSCEEEEEEEEE
T ss_pred cCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-EEEEee--CCEEEEeecCCccCCCCeEEEcCE
Confidence 00000000 00 0012234556 9999998 566665 4667665 4 56799999
Q ss_pred EEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhC---CCeEEEEcc
Q 013914 118 LVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN---NIDVSMVYP 194 (434)
Q Consensus 118 lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~---g~~v~lv~~ 194 (434)
||||||++|+.|+ ++|.+ .+++ ..++..+ . ..+++++|||+|++|+|+|..|.+. |.+|+++++
T Consensus 159 lViATGs~p~~p~---i~G~~--~~~~---~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~ 225 (495)
T 2wpf_A 159 ILLATGSWPQMPA---IPGIE--HCIS---SNEAFYL----P-EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYR 225 (495)
T ss_dssp EEECCCEEECCCC---CTTGG--GCEE---HHHHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred EEEeCCCCcCCCC---CCCcc--cccc---HHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEc
Confidence 9999999998877 56542 2343 3333222 1 1478999999999999999999999 999999999
Q ss_pred CCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hcc
Q 013914 195 EPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQ 271 (434)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~---~~~ 271 (434)
.+++++. +++++.+.+.+.+++.||+++++++|.++..++++ ...+++.+|+++++|.||+|+|++|+++.+ ..+
T Consensus 226 ~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~g 303 (495)
T 2wpf_A 226 NNLILRG-FDETIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVG 303 (495)
T ss_dssp SSSSCTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTT
T ss_pred CCccccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEECCCcEEEcCEEEECCCCcccccccchhhcC
Confidence 9999886 89999999999999999999999999999874333 357888899899999999999999999743 345
Q ss_pred ccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEe
Q 013914 272 VAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSR 350 (434)
Q Consensus 272 ~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~ 350 (434)
+.. ++|+|.||+++||++|+|||+|||++.+ .++..|..||+.||.||++... ....|..+|+..++
T Consensus 304 l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~ 371 (495)
T 2wpf_A 304 VKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL----------MLTPVAINEGAALVDTVFGNKP--RKTDHTRVASAVFS 371 (495)
T ss_dssp CCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCC--CCCCCSSCEEEECC
T ss_pred ccCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCC--CcCCCCCCCEEEEC
Confidence 666 4788999999999999999999999643 5678899999999999997532 12566677766555
Q ss_pred ccCceeEEeecCCC------CEEEEcC--CCc------ccCCCcE-EEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHH
Q 013914 351 AFDLSWQFYGDNVG------DTVLFGD--NDL------ASATHKF-GTYWIK--DGKVVGVFLESGTPEEN-KAIAKVAR 412 (434)
Q Consensus 351 ~~~~~~~~~g~~~~------~~~~~~~--~~~------~~~~~~~-~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~ 412 (434)
.+ .+..+|+++. ..+.... ... ...+..| +|++++ +++|||+|++|+++.++ +.++.||+
T Consensus 372 ~~--~~a~vGl~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~ 449 (495)
T 2wpf_A 372 IP--PIGTCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLR 449 (495)
T ss_dssp SS--CEEEEECCHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CC--CeEEEeCCHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 44 4555676542 1122111 110 0235679 998884 79999999999998885 99999999
Q ss_pred cCCCCCChhhhhccCCCcccc
Q 013914 413 VQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 413 ~~~~~~~~~~l~~~~~~~~~~ 433 (434)
+++|++|+..+.-+.+++.+.
T Consensus 450 ~~~t~~~l~~~~~~hPt~~e~ 470 (495)
T 2wpf_A 450 LNAKISDFYNTIGVHPTSAEE 470 (495)
T ss_dssp TTCBHHHHHHSCCCSSCSGGG
T ss_pred CCCCHHHHhhcccCCCChHHH
Confidence 999999888877777776653
No 26
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.7e-49 Score=388.46 Aligned_cols=398 Identities=24% Similarity=0.282 Sum_probs=280.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC----CCCccCccccCCCCC-----CCCCCcccccCCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY----ERPALSKAYLFPEGT-----ARLPGFHVCVGSG 73 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 73 (434)
|+++||+|||||+||++||..|+++|.+ |+|||+++..+. ..|..++.++..... ..+..+.......
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 99 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMK---VAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP 99 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC
Confidence 3469999999999999999999999987 999998754321 001111111110000 0000000000000
Q ss_pred -----------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcccccCCCC
Q 013914 74 -----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 74 -----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~ 134 (434)
.......++++.+++++.+ ....++.....+...++ .++.||+||||||+.|. +++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~--~ipg~ 176 (491)
T 3urh_A 100 KLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA--GIPGV 176 (491)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC--CBTTB
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC--CCCCc
Confidence 0001223455678999998 44444444445555566 57999999999999864 32222
Q ss_pred CC-CCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHH
Q 013914 135 EG-ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 213 (434)
Q Consensus 135 ~g-~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~ 213 (434)
+. .+...++ +..+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+
T Consensus 177 ~~~~~~~~~~---~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~ 247 (491)
T 3urh_A 177 EVAFDEKTIV---SSTGALAL-----EKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQR 247 (491)
T ss_dssp CCCCCSSSEE---CHHHHTSC-----SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHH
T ss_pred ccccCCeeEE---ehhHhhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHH
Confidence 21 1223343 33333221 125799999999999999999999999999999999999986 79999999999
Q ss_pred HHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCC
Q 013914 214 YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDF 284 (434)
Q Consensus 214 ~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g--~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~ 284 (434)
.+++.||++++++++.+++.++++ ..+.+.+ | +++++|.|++|+|++|+++++ ..++.. ++|+|.||++
T Consensus 248 ~l~~~gV~v~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~ 325 (491)
T 3urh_A 248 MLTKQGIDFKLGAKVTGAVKSGDG--AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH 325 (491)
T ss_dssp HHHHTTCEEECSEEEEEEEEETTE--EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTT
T ss_pred HHHhCCCEEEECCeEEEEEEeCCE--EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCC
Confidence 999999999999999999873333 3455542 5 579999999999999999863 346666 5788999999
Q ss_pred CCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC-
Q 013914 285 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV- 363 (434)
Q Consensus 285 ~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~- 363 (434)
+||++|+|||+|||++.+ ..+..|..||+.||.+|++... ...+..+|+..+. +..+..+|+++
T Consensus 326 ~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~--~p~~a~vGlte~ 390 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRGP----------MLAHKAEDEGVAVAEIIAGQAG---HVNYDVIPGVVYT--QPEVASVGKTEE 390 (491)
T ss_dssp CBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTSCC---CCCTTCCCEEECS--SSCEEEEECCHH
T ss_pred CCCCCCCEEEEEecCCCc----------cchhHHHHHHHHHHHHHcCCCc---ccCCCCCCEEEEc--cCCeEEEeCCHH
Confidence 999999999999999654 5678899999999999998542 2566778876654 44555668764
Q ss_pred -----CCEEEEcCCC-----cc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccC
Q 013914 364 -----GDTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEG 427 (434)
Q Consensus 364 -----~~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~ 427 (434)
|..+..+..+ +. ..+.+|+|+++ ++++|||+|++|+++.++ +.++.||++++|++||..+.-+.
T Consensus 391 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~h 470 (491)
T 3urh_A 391 ELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAH 470 (491)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCS
T ss_pred HHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCC
Confidence 3323222211 11 24568999887 479999999999999885 99999999999999888777666
Q ss_pred CCccc
Q 013914 428 LSFAS 432 (434)
Q Consensus 428 ~~~~~ 432 (434)
+++.+
T Consensus 471 Pt~~e 475 (491)
T 3urh_A 471 PTMSE 475 (491)
T ss_dssp SCTTH
T ss_pred CChHH
Confidence 66654
No 27
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=8.1e-49 Score=385.66 Aligned_cols=402 Identities=18% Similarity=0.198 Sum_probs=286.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CCCccCccccCCC----CCCCCCCcccccCCC--
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ERPALSKAYLFPE----GTARLPGFHVCVGSG-- 73 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-- 73 (434)
+.++||+|||||+||+++|..|++.|.+ |+|||++...+. ..|..++.++... .......+.......
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~---V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGAR---AAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 3469999999999999999999999987 999998753210 0011111111000 000000000000000
Q ss_pred ---------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCC
Q 013914 74 ---------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 74 ---------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~ 138 (434)
........++..+++++.+ .+..++.....+. .+++++.||+||+|||+.|+.|....++|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 0001122345578999987 4555555555666 4667899999999999999888211256643
Q ss_pred CCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhc
Q 013914 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
. ..+..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 173 --~---~~~~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~~ 241 (478)
T 3dk9_A 173 --L---GITSDGFFQLE-----ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELENA 241 (478)
T ss_dssp --G---SBCHHHHTTCC-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHT
T ss_pred --e---eEchHHhhchh-----hcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHHC
Confidence 1 12333332221 14789999999999999999999999999999999999875 7999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeCC---C----cEEECCEEEEcccCccChhh--h-hccccc-cCCcEEeCCCCCC
Q 013914 219 GIKIIKGTVAVGFTTNADGEVKEVKLKD---G----RTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKT 287 (434)
Q Consensus 219 GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g----~~~~~D~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t 287 (434)
||++++++.+++++..+++....+.+.+ | +++++|.|++|+|++|+++. + ..++.. ++|+|.||+++||
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t 321 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT 321 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc
Confidence 9999999999999875555334566665 2 57999999999999999983 2 346666 6789999999999
Q ss_pred CCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCC---
Q 013914 288 SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--- 364 (434)
Q Consensus 288 ~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--- 364 (434)
++|+|||+|||++.+ ..+..|..||+.||.||++.... ....|..+|+..++.++++ .+|+++.
T Consensus 322 ~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~p~~a--~vGlte~~a~ 388 (478)
T 3dk9_A 322 NVKGIYAVGDVCGKA----------LLTPVAIAAGRKLAHRLFEYKED-SKLDYNNIPTVVFSHPPIG--TVGLTEDEAI 388 (478)
T ss_dssp SSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCTTCCEEECCSSCEE--EEECCHHHHH
T ss_pred CCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHcCCCCc-ccCCCCCCCeEEECCCceE--EeeCCHHHHH
Confidence 999999999999654 46778899999999999986221 2356777888766655554 4576641
Q ss_pred -----CEEE-----EcCCCcc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013914 365 -----DTVL-----FGDNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 365 -----~~~~-----~~~~~~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~ 428 (434)
..+. +....+. ..+.+|+|+++ ++++|||+|++|+++.++ +.++.||++++|++||..+.-+.+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hP 468 (478)
T 3dk9_A 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHP 468 (478)
T ss_dssp HHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred hhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 1111 1111111 24578899887 579999999999999885 999999999999998887777777
Q ss_pred Ccccc
Q 013914 429 SFASK 433 (434)
Q Consensus 429 ~~~~~ 433 (434)
++++.
T Consensus 469 t~~e~ 473 (478)
T 3dk9_A 469 TSSEE 473 (478)
T ss_dssp SSGGG
T ss_pred ChHHH
Confidence 76654
No 28
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.1e-47 Score=376.50 Aligned_cols=395 Identities=23% Similarity=0.279 Sum_probs=283.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCccCccccCCCC----------CCCCC------
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----------TARLP------ 64 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----------~~~~~------ 64 (434)
++||+|||||+||+++|..|++.|.+ |+|||+++..+.. .+..++.++.... ...++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMK---TACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 58999999999999999999999987 9999998543210 0111111111000 00000
Q ss_pred -CcccccCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcccccCCCCC
Q 013914 65 -GFHVCVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVE 135 (434)
Q Consensus 65 -~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~ 135 (434)
.+...... .......+++++.+++++.++. ..++.....+.+.+| .++.||+||+|||+.|+.|+ ++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~-~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~---~~ 154 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEG-SFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELP---FL 154 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE-EEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBT---TB
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCC---CC
Confidence 00000000 0000113445667999999854 446655445655666 67999999999999998887 45
Q ss_pred CCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHH
Q 013914 136 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 215 (434)
Q Consensus 136 g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l 215 (434)
|.+..+++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 155 g~~~~~v~---t~~~~~~~~-----~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (468)
T 2qae_A 155 PFDEKVVL---SSTGALALP-----RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGAL 225 (468)
T ss_dssp CCCSSSEE---CHHHHHTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHH
T ss_pred CCCcCcee---chHHHhhcc-----cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHH
Confidence 55444555 344443321 14789999999999999999999999999999999999986 8999999999999
Q ss_pred -HhcCcEEEcCCeEEEEEecCCCcEEEEEeC--CC--cEEECCEEEEcccCccChhh--hh-ccccc-cCCcEEeCCCCC
Q 013914 216 -ANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFK 286 (434)
Q Consensus 216 -~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~--~g--~~~~~D~vi~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~ 286 (434)
++.||+++++++|.+++.++++ ..+.+. +| +++++|.|++|+|++|++++ ++ .++.. ++|+|.||+++|
T Consensus 226 ~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 303 (468)
T 2qae_A 226 AKNEKMKFMTSTKVVGGTNNGDS--VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFE 303 (468)
T ss_dssp HHHTCCEEECSCEEEEEEECSSS--EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSB
T ss_pred hhcCCcEEEeCCEEEEEEEcCCe--EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcc
Confidence 9999999999999999874333 345554 66 67999999999999999986 33 36666 468899999999
Q ss_pred CCCCcEEEeccccc-ccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC--
Q 013914 287 TSADDVYAVGDVAT-FPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-- 363 (434)
Q Consensus 287 t~~~~iya~GD~~~-~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-- 363 (434)
|++|+|||+|||+. .+ ..+..|..||+.||.||++.. ....|..+|++.+ .+..+..+|.++
T Consensus 304 t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~--~~~~~a~vG~~e~~ 368 (468)
T 2qae_A 304 TSIPDVYAIGDVVDKGP----------MLAHKAEDEGVACAEILAGKP---GHVNYGVIPAVIY--TMPEVASVGKSEDE 368 (468)
T ss_dssp CSSTTEEECGGGBSSSC----------SCHHHHHHHHHHHHHHHTTCC---CCCCTTSCCEEEC--SSSEEEEEECCHHH
T ss_pred cCCCCEEEeeccCCCCC----------ccHhHHHHHHHHHHHHHcCCC---ccCCCCCCCEEEE--CCCceEEEeCCHHH
Confidence 99999999999998 33 467789999999999999743 1244566776544 445566668764
Q ss_pred ----CCEEEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013914 364 ----GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 364 ----~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~ 428 (434)
+..+..... .+. ....+|+|++++ +++|||+|++|+.+.++ +.++.||++++|++|+..+..+.+
T Consensus 369 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~P 448 (468)
T 2qae_A 369 LKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHP 448 (468)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 222222211 111 235679998884 79999999999998885 999999999999998887666666
Q ss_pred Cccc
Q 013914 429 SFAS 432 (434)
Q Consensus 429 ~~~~ 432 (434)
+|.+
T Consensus 449 t~~e 452 (468)
T 2qae_A 449 TMSE 452 (468)
T ss_dssp CTHH
T ss_pred CHHH
Confidence 6543
No 29
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=2.8e-48 Score=381.81 Aligned_cols=395 Identities=19% Similarity=0.226 Sum_probs=282.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCccCccccCC---------CCCCCCC----
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFP---------EGTARLP---- 64 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~---------~~~~~~~---- 64 (434)
|+.++||+|||||+||+++|..|++.|.+ |+|||+++..+-. .+..++.++.. .....++
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~ 79 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLK---VAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEP 79 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 44578999999999999999999999887 9999996542200 01111111100 0000000
Q ss_pred --CcccccCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEc--cCC------------cEEEcceEEEec
Q 013914 65 --GFHVCVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLS--ATG------------LIFKYQILVIAT 122 (434)
Q Consensus 65 --~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~--~~~------------~~~~~d~lvlAt 122 (434)
.+...... ........++++.+++++.++.+. ++. +.+.+ .++ .+++||++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAt 156 (482)
T 1ojt_A 80 ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAA 156 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccC--CEEEEEecCCcccccccccCcceEEEcCEEEECC
Confidence 00000000 000001234566799999986544 443 44433 344 579999999999
Q ss_pred CCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc
Q 013914 123 GSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL 202 (434)
Q Consensus 123 G~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~ 202 (434)
|+.|+.|+. ++ .+ ..++ +..++..+. . .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++.
T Consensus 157 Gs~p~~~~~--i~-~~-~~v~---~~~~~~~~~----~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~- 223 (482)
T 1ojt_A 157 GSRVTKLPF--IP-ED-PRII---DSSGALALK----E-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG- 223 (482)
T ss_dssp CEEECCCSS--CC-CC-TTEE---CHHHHTTCC----C-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-
T ss_pred CCCCCCCCC--CC-cc-CcEE---cHHHHhccc----c-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-
Confidence 999987763 33 22 2444 444443321 1 4789999999999999999999999999999999999986
Q ss_pred CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC----CcEEECCEEEEcccCccChhhh--h-ccccc-
Q 013914 203 FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD----GRTLEADIVVVGVGGRPLISLF--K-GQVAE- 274 (434)
Q Consensus 203 ~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~----g~~~~~D~vi~a~G~~p~~~~~--~-~~~~~- 274 (434)
+++++.+.+.+.+++.||+++++++|.+++.+++ ...+++.+ |+++++|.|++|+|++||++++ + .++..
T Consensus 224 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~ 301 (482)
T 1ojt_A 224 ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED--GVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVT 301 (482)
T ss_dssp SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT--EEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCC
T ss_pred cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC--eEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeC
Confidence 8999999999999999999999999999987332 24667766 7789999999999999999874 3 35666
Q ss_pred cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCc
Q 013914 275 NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDL 354 (434)
Q Consensus 275 ~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~ 354 (434)
.+|+|.||+++||++|+|||+|||++.+ ..+..|..||+.||.||++.. ....+..+|++.++.+
T Consensus 302 ~~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~~~~-- 366 (482)
T 1ojt_A 302 DRGFIEVDKQMRTNVPHIYAIGDIVGQP----------MLAHKAVHEGHVAAENCAGHK---AYFDARVIPGVAYTSP-- 366 (482)
T ss_dssp TTSCCCCCTTSBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCCCCCEEECSSS--
T ss_pred CCCCEeeCCCcccCCCCEEEEEcccCCC----------ccHHHHHHHHHHHHHHHcCCC---ccCCCCCCCEEEEcCC--
Confidence 4588999999999999999999999854 467789999999999999743 1245666776655544
Q ss_pred eeEEeecCC------CCEEEEcCCC-----cc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCC
Q 013914 355 SWQFYGDNV------GDTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSV 417 (434)
Q Consensus 355 ~~~~~g~~~------~~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~ 417 (434)
.+..+|.++ +..+..+..+ +. ....+|+|+++ ++++|||+|++|+.+.++ +.++.||++++|+
T Consensus 367 ~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~ 446 (482)
T 1ojt_A 367 EVAWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDA 446 (482)
T ss_dssp CEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBH
T ss_pred CeEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 455667764 3222222211 11 23567999888 589999999999998885 9999999999999
Q ss_pred CChhhhhccCCCccc
Q 013914 418 ESLDVLKNEGLSFAS 432 (434)
Q Consensus 418 ~~~~~l~~~~~~~~~ 432 (434)
+|+..+.-+.+++.+
T Consensus 447 ~~l~~~~~~~Pt~~e 461 (482)
T 1ojt_A 447 ADIGKTIHPHPTLGE 461 (482)
T ss_dssp HHHHTSCCCSSSSTT
T ss_pred HHHhcCccCCCCHHH
Confidence 988877777766654
No 30
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=6.5e-49 Score=386.29 Aligned_cols=396 Identities=22% Similarity=0.250 Sum_probs=285.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC----CCC------CccCccccCCCC-----CCCCCCccc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP----YER------PALSKAYLFPEG-----TARLPGFHV 68 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~----~~~------~~~~~~~~~~~~-----~~~~~~~~~ 68 (434)
++|||+|||||+||+++|..|++.|++ |+|||+++..+ +.. |..++.++.... ...+..+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLK---TALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCC---EEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 469999999999999999999999987 99999986211 000 000111000000 000000000
Q ss_pred ccCCC-----------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcccc
Q 013914 69 CVGSG-----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 69 ~~~~~-----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
..... .......++++.+++++.+ .+..++.....+...++ .++.||++|+|||++|..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 79 STGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp ECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 00000 0001123345678999998 44445555556666666 5799999999999999876
Q ss_pred cCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHH
Q 013914 130 TDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAA 209 (434)
Q Consensus 130 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~ 209 (434)
+. .+.+...+++..+..+ + ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+
T Consensus 158 ~~---~~~~~~~v~~~~~~~~---~-----~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~ 225 (476)
T 3lad_A 158 PP---APVDQDVIVDSTGALD---F-----QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAK 225 (476)
T ss_dssp TT---SCCCSSSEEEHHHHTS---C-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHH
T ss_pred CC---CCCCcccEEechhhhc---c-----ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHH
Confidence 63 3344456665432221 1 125789999999999999999999999999999999999985 7999999
Q ss_pred HHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC---cEEECCEEEEcccCccChhhh---hccccc-cCCcEEeC
Q 013914 210 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG---RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETD 282 (434)
Q Consensus 210 ~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g---~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd 282 (434)
.+.+.+++.||+++++++|++++.++++ ..+.+.++ +++++|.|++|+|++|+++.+ ..++.. ++|+|.||
T Consensus 226 ~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd 303 (476)
T 3lad_A 226 EAQKILTKQGLKILLGARVTGTEVKNKQ--VTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD 303 (476)
T ss_dssp HHHHHHHHTTEEEEETCEEEEEEECSSC--EEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEcCCE--EEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC
Confidence 9999999999999999999999874333 34666544 679999999999999999853 345666 57889999
Q ss_pred CCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecC
Q 013914 283 DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDN 362 (434)
Q Consensus 283 ~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 362 (434)
+++||++|+|||+|||++.+ ..+..|..||+.||+||++... ...+..+|++.++ +..+..+|++
T Consensus 304 ~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~--~~~~a~vGlt 368 (476)
T 3lad_A 304 DYCATSVPGVYAIGDVVRGA----------MLAHKASEEGVVVAERIAGHKA---QMNYDLIPAVIYT--HPEIAGVGKT 368 (476)
T ss_dssp TTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHCCC---CCCTTCCCEEECS--SSEEEEEECC
T ss_pred CCcccCCCCEEEEEccCCCc----------ccHHHHHHHHHHHHHHhcCCCc---ccCCCCCCEEEEC--cCCEEEeeCC
Confidence 99999999999999999654 4677899999999999997542 2566778876654 4555666876
Q ss_pred C------CCEEEEcCCC-----cc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhc
Q 013914 363 V------GDTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKN 425 (434)
Q Consensus 363 ~------~~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~ 425 (434)
+ |..+..+..+ +. ..+.+|+|+++ ++++|||+|++|+++.++ +.++.||++++|++||..+.-
T Consensus 369 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~ 448 (476)
T 3lad_A 369 EQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVF 448 (476)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCC
T ss_pred HHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCcc
Confidence 5 3223222211 11 24568999887 479999999999999885 999999999999998887766
Q ss_pred cCCCccc
Q 013914 426 EGLSFAS 432 (434)
Q Consensus 426 ~~~~~~~ 432 (434)
+.+++++
T Consensus 449 ~hPt~~e 455 (476)
T 3lad_A 449 AHPALSE 455 (476)
T ss_dssp CSSCSHH
T ss_pred CCCChHH
Confidence 6666554
No 31
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.8e-48 Score=376.97 Aligned_cols=397 Identities=20% Similarity=0.247 Sum_probs=288.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCCC----CCCCCCcccccCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGSG 73 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 73 (434)
|++.++||+|||||++|+++|..|+++|.+ |+|||++...+ +..|..++.++.... ....+.+.......
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKK---VAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 555579999999999999999999999987 99999954211 000111111100000 00000010000000
Q ss_pred -----------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEc-cCCcEEEcceEEEecCCCcc-cccCCCC
Q 013914 74 -----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLS-ATGLIFKYQILVIATGSTVL-RLTDFGV 134 (434)
Q Consensus 74 -----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-~~~~~~~~d~lvlAtG~~~~-~~~~~~~ 134 (434)
.......+++..+++++.+ .+..+ +.+++.+ .+++.+.||++|+|||+.|. .|+ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i--~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~---i 151 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELA--GPNTVKLLASGKTVTAERIVIAVGGHPSPHDA---L 151 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEES--SSSEEEETTTTEEEEEEEEEECCCEEECCCTT---S
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEe--eCCEEEEecCCeEEEeCEEEEecCCCcccCCC---C
Confidence 0011223345568999987 55544 3567776 56778999999999999998 777 4
Q ss_pred CCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHH
Q 013914 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+ .+ .+..+...+. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 152 ~G~~--~~---~~~~~~~~~~-----~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~ 220 (463)
T 4dna_A 152 PGHE--LC---ITSNEAFDLP-----ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAA 220 (463)
T ss_dssp TTGG--GC---BCHHHHTTCS-----SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHH
T ss_pred CCcc--cc---ccHHHHhhhh-----cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHH
Confidence 6543 12 2333333221 14789999999999999999999999999999999998875 799999999999
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcEEEEE-eCCCcEEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCCCCCCC
Q 013914 215 YANKGIKIIKGTVAVGFTTNADGEVKEVK-LKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSA 289 (434)
Q Consensus 215 l~~~GV~~~~~~~v~~i~~~~~g~v~~v~-~~~g~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~ 289 (434)
+++.||+++++++|++++.++++. ..+. +.+|+ +++|.|++|+|++|+++++ ..++.. ++|+|.||+++||++
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 298 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTST 298 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSS
T ss_pred HHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCC
Confidence 999999999999999998744443 4677 88897 9999999999999999863 346666 678999999999999
Q ss_pred CcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------
Q 013914 290 DDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------ 363 (434)
Q Consensus 290 ~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------ 363 (434)
|+|||+|||++.+ +.+..|..||+.+|+||++.... ...+..+|+..++.+++ ..+|+++
T Consensus 299 ~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~--a~vG~te~~a~~~ 364 (463)
T 4dna_A 299 PGIYALGDVTDRV----------QLTPVAIHEAMCFIETEYKNNPT--SPDHDLIATAVFSQPEI--GTVGITEEEAARK 364 (463)
T ss_dssp TTEEECSGGGSSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCSCCCEEECSSSCE--EEEECCHHHHHHH
T ss_pred CCEEEEEecCCCC----------CChHHHHHHHHHHHHHHcCCCCc--ccCCCCCCEEEECCCCe--EEecCCHHHHHHc
Confidence 9999999999843 56788999999999999976432 24677788877665554 4557664
Q ss_pred CCEEEE-----cCCCcc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 364 GDTVLF-----GDNDLA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 364 ~~~~~~-----~~~~~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
+..+.. ....+. ..+.+|+|+++ ++++|||+|++|+++.++ +.++.||++++|++||..+.-+.+++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 444 (463)
T 4dna_A 365 FQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAE 444 (463)
T ss_dssp SSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGG
T ss_pred CCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 322222 111111 24678899887 479999999999999885 9999999999999988877777777665
Q ss_pred c
Q 013914 433 K 433 (434)
Q Consensus 433 ~ 433 (434)
.
T Consensus 445 ~ 445 (463)
T 4dna_A 445 E 445 (463)
T ss_dssp G
T ss_pred H
Confidence 4
No 32
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.6e-47 Score=371.47 Aligned_cols=396 Identities=19% Similarity=0.197 Sum_probs=285.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CCCccCccccCCCC----CC-CCCCcccccCC--
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ERPALSKAYLFPEG----TA-RLPGFHVCVGS-- 72 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~---~~~~~~~~~~~~~~----~~-~~~~~~~~~~~-- 72 (434)
++++||+|||||+||+++|..|++.|.+ |+|||++...+. ..|.+++.++.... .. ..+.+......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~ 78 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQK---CALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINK 78 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCe---EEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCc
Confidence 4579999999999999999999998886 999999843110 00111111111000 00 00001000000
Q ss_pred -C--------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCC
Q 013914 73 -G--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA 137 (434)
Q Consensus 73 -~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~ 137 (434)
. ........+++.+++++.+ .+..++. +++.+ +++++.||+||+|||++|..|+ ++|.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~---i~g~ 151 (450)
T 1ges_A 79 FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPSHPD---IPGV 151 (450)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCC---STTG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCCCCC---CCCc
Confidence 0 0001122345679999998 4555653 56766 6778999999999999998877 4654
Q ss_pred CCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHh
Q 013914 138 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 138 ~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
+ .+ .+..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 152 ~--~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 220 (450)
T 1ges_A 152 E--YG---IDSDGFFAL----P-ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMISETLVEVMNA 220 (450)
T ss_dssp G--GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c--ce---ecHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHHHHHHHHHHHH
Confidence 2 12 244444332 1 14789999999999999999999999999999999998885 899999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--h-hccccc-cCCcEEeCCCCCCCCCcEE
Q 013914 218 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKTSADDVY 293 (434)
Q Consensus 218 ~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~~iy 293 (434)
.||+++++++|.+++.++++. ..+.+.+|+++++|.|++|+|++|+++. + ..++.. ++|+|.||+++||++|+||
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~Iy 299 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIY 299 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEE
T ss_pred CCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEE
Confidence 999999999999998743332 4678889989999999999999999973 3 346666 5788999999999999999
Q ss_pred EecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC-------C-C
Q 013914 294 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------G-D 365 (434)
Q Consensus 294 a~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~-~ 365 (434)
|+|||++.+ ..+..|..||+.+|.||++.... ....|..+|+..++.+++.. +|.++ | .
T Consensus 300 A~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~~~~a~--vG~~e~~a~~~~g~~ 366 (450)
T 1ges_A 300 AVGDNTGAV----------ELTPVAVAAGRRLSERLFNNKPD-EHLDYSNIPTVVFSHPPIGT--VGLTEPQAREQYGDD 366 (450)
T ss_dssp ECSGGGTSC----------CCHHHHHHHHHHHHHHHHTTCTT-CCCCCSSCCEEECCSSCEEE--EECCHHHHHHHHCGG
T ss_pred EEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCeEEECCCceEE--EeCCHHHHHhcCCCC
Confidence 999998743 56788999999999999974321 11456778887666565554 46543 2 1
Q ss_pred EEEEcC-----CCc---ccCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013914 366 TVLFGD-----NDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 366 ~~~~~~-----~~~---~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~~ 433 (434)
.+.... ... ...+..|+|+++ ++++|||+|++|+++.++ +.++.||++++|++|+..+..+.+++.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 445 (450)
T 1ges_A 367 QVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEE 445 (450)
T ss_dssp GEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGG
T ss_pred cEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHH
Confidence 122111 011 123567888887 479999999999999885 99999999999999888877777776654
No 33
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.2e-48 Score=379.76 Aligned_cols=396 Identities=19% Similarity=0.190 Sum_probs=288.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEeCCCCCC---CCCCccCccccCC---------CCCCCCCCcccc
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAP---YERPALSKAYLFP---------EGTARLPGFHVC 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~---g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~~ 69 (434)
++||||||||+||+++|.+|++. |.+ |+|||+++..+ ...+..++.++.. ...+.++.+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~---V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQ---VTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEE---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCE---EEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 48999999999999999999999 776 99999986211 0001111211110 000111000000
Q ss_pred cCCC--------------CCCCChhhHhhcCcEEEcCCeeEEEECC----CC--EEEccCCc--EEEcceEEEecCCCcc
Q 013914 70 VGSG--------------GERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGL--IFKYQILVIATGSTVL 127 (434)
Q Consensus 70 ~~~~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~--~~~~d~lvlAtG~~~~ 127 (434)
.... ......+++++.+++++.+ .+..+++. .+ .+...+++ .+.||++|+|||+.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 0000 0001234566789999998 47777662 13 34555665 7999999999999998
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHH
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 207 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~ 207 (434)
.|+ ++|.+..++++..+..+.. ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++
T Consensus 158 ~p~---i~g~~~~~v~~~~~~~~~~--------~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 225 (499)
T 1xdi_A 158 ILP---SAQPDGERILTWRQLYDLD--------ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADA 225 (499)
T ss_dssp CCG---GGCCCSSSEEEGGGGGGCS--------SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHH
T ss_pred CCC---CCCCCcCcEEehhHhhhhh--------ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHH
Confidence 887 4665555677655433221 14789999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--hh-ccccc-cCCcEEeCC
Q 013914 208 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDD 283 (434)
Q Consensus 208 ~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~ 283 (434)
.+.+.+.+++.||+++++++|++++.+++ . ..+.+.+|+++++|.||+|+|++|++++ ++ .++.. ++|+|.||+
T Consensus 226 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~-v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 303 (499)
T 1xdi_A 226 ALVLEESFAERGVRLFKNARAASVTRTGA-G-VLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDR 303 (499)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEECSS-S-EEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCS
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeCC-E-EEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECC
Confidence 99999999999999999999999987333 3 4677888889999999999999999987 43 36666 468899999
Q ss_pred CCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC
Q 013914 284 FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV 363 (434)
Q Consensus 284 ~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 363 (434)
++||++|+|||+|||++.+ ..+..|..||+.||.||++... ....|..+|+++++ +..+..+|.++
T Consensus 304 ~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~--~~~~a~vG~~e 369 (499)
T 1xdi_A 304 VSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALGEGV--SPIRLRTVAATVFT--RPEIAAVGVPQ 369 (499)
T ss_dssp SSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTTCCC--CCCCGGGCEEEECS--SSEEEEEESCH
T ss_pred CcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCC--ccCCCCCCcEEEEe--cCCceEeCCCH
Confidence 9999999999999999854 4567899999999999997521 12456677876654 45556668764
Q ss_pred ------CCEEEEcC-----CCcc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhcc
Q 013914 364 ------GDTVLFGD-----NDLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNE 426 (434)
Q Consensus 364 ------~~~~~~~~-----~~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~ 426 (434)
|..+.... ..+. ....+|+|++++ +|+|||++++|+.+.++ +.++.||++++|++|+..+..+
T Consensus 370 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~ 449 (499)
T 1xdi_A 370 SVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAV 449 (499)
T ss_dssp HHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCC
T ss_pred HHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhccccc
Confidence 22222211 1111 235679998885 69999999999998884 9999999999999988776666
Q ss_pred CCCccc
Q 013914 427 GLSFAS 432 (434)
Q Consensus 427 ~~~~~~ 432 (434)
.++|.+
T Consensus 450 ~Pt~~e 455 (499)
T 1xdi_A 450 YPSLSG 455 (499)
T ss_dssp SSSTHH
T ss_pred CCCchH
Confidence 666654
No 34
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=4.2e-48 Score=379.45 Aligned_cols=395 Identities=18% Similarity=0.165 Sum_probs=281.8
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCC----CCCCCCCc---ccccC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGF---HVCVG 71 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~---~~~~~ 71 (434)
|+.++||+|||||++|+++|.+|++.|.+ |+|||++...+ +..+..++.++... .....+.+ .....
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 77 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQ---VTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVP 77 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCC
Confidence 34579999999999999999999999876 99999984211 00000011100000 00000000 00000
Q ss_pred CCCC----------------CCChhhHhhc-CcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcccccCC
Q 013914 72 SGGE----------------RLLPEWYKEK-GIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDF 132 (434)
Q Consensus 72 ~~~~----------------~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~ 132 (434)
.... ....+++++. +++++.+ .+..++....++.+.++ .++.||+||+|||++|+.|+
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~-- 154 (467)
T 1zk7_A 78 TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPP-- 154 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCC--
T ss_pred ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCC--
Confidence 0000 0123445556 8999987 57777766556666677 67999999999999998887
Q ss_pred CCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHH
Q 013914 133 GVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 212 (434)
Q Consensus 133 ~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~ 212 (434)
++|.+...++ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ +++++.+.+.
T Consensus 155 -i~G~~~~~~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~ 223 (467)
T 1zk7_A 155 -IPGLKESPYW---TSTEALAS----D-TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVT 223 (467)
T ss_dssp -CTTTTTSCCB---CHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHH
T ss_pred -CCCCCcCcee---cHHHHhcc----c-ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHH
Confidence 4665444443 33443332 1 1479999999999999999999999999999999999988 7999999999
Q ss_pred HHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCCCCCC
Q 013914 213 GYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTS 288 (434)
Q Consensus 213 ~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~ 288 (434)
+.+++.||+++++++|++++. ++....+.++ +.++++|.||+|+|++|+++.+ ..++.. .+|+|.||+++||+
T Consensus 224 ~~l~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~ 300 (467)
T 1zk7_A 224 AAFRAEGIEVLEHTQASQVAH--MDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTS 300 (467)
T ss_dssp HHHHHTTCEEETTCCEEEEEE--ETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCS
T ss_pred HHHHhCCCEEEcCCEEEEEEE--eCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccC
Confidence 999999999999999999986 3333456666 4589999999999999998753 345666 46889999999999
Q ss_pred CCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC-----
Q 013914 289 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV----- 363 (434)
Q Consensus 289 ~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~----- 363 (434)
.|+|||+|||+..+ ..+..|..||+.+|.||++.. ....+..+|++... +..+..+|.++
T Consensus 301 ~~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~--~~~~a~vG~~~~~a~~ 365 (467)
T 1zk7_A 301 NPNIYAAGDCTDQP----------QFVYVAAAAGTRAAINMTGGD---AALDLTAMPAVVFT--DPQVATVGYSEAEAHH 365 (467)
T ss_dssp STTEEECSTTBSSC----------CCHHHHHHHHHHHHHHHTTCC---CCCCCTTCEEEECS--SSEEEEEECCHHHHHH
T ss_pred CCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC---cccCCCCCCEEEec--CCceEEEecCHHHHHh
Confidence 99999999999865 357789999999999998752 12456667765544 44555667654
Q ss_pred -CCEEEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCcc
Q 013914 364 -GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFA 431 (434)
Q Consensus 364 -~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~ 431 (434)
|..+..... .+. ....+|.|++++ +|+|||++++|+++.++ +.++.+|++++|++|+..+.-+.+++.
T Consensus 366 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~ 445 (467)
T 1zk7_A 366 DGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMV 445 (467)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTT
T ss_pred cCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHH
Confidence 222222111 111 235679998884 89999999999998885 999999999999986665544444443
No 35
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.4e-47 Score=375.40 Aligned_cols=395 Identities=21% Similarity=0.238 Sum_probs=280.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CCCccCccccCC----------CCCCCCC-----Cc
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ERPALSKAYLFP----------EGTARLP-----GF 66 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~---~~~~~~~~~~~~----------~~~~~~~-----~~ 66 (434)
++||+|||||+||+++|..|++.|.+ |+|||++..... ..+..++.++.. .....++ .+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLS---TAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 58999999999999999999999987 999999832100 000111111100 0000000 00
Q ss_pred ccccCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcccccCCCCCCCC
Q 013914 67 HVCVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 67 ~~~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~g~~ 138 (434)
...... .......+.+++.+++++.++.+. ++.....+.+.++ .++.||++|+|||+.|+.|+. ++.+
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~---~g~~ 155 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPG---TSLS 155 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTT---CCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCC---CCCC
Confidence 000000 000011344566799999985543 4333234555566 689999999999999988774 5543
Q ss_pred CCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhc
Q 013914 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
.. ++ +..++..+. . .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 156 ~~-~~---~~~~~~~~~----~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~ 225 (464)
T 2a8x_A 156 AN-VV---TYEEQILSR----E-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKKL 225 (464)
T ss_dssp TT-EE---CHHHHHTCS----S-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHH
T ss_pred ce-EE---ecHHHhhcc----c-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHc
Confidence 22 33 444443321 1 4789999999999999999999999999999999999985 8999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEECCEEEEcccCccChhh--hh-ccccc-cCCcEEeCCCCCCCCCc
Q 013914 219 GIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFKTSADD 291 (434)
Q Consensus 219 GV~~~~~~~v~~i~~~~~g~v~~v~~~-~g--~~~~~D~vi~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~ 291 (434)
||++++++++++++.++++ ..+.+. +| +++++|.|++|+|++||+++ ++ .++.. ++|+|.||+++||++|+
T Consensus 226 gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~ 303 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQ--VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGH 303 (464)
T ss_dssp TCEEECSCEEEEEEECSSC--EEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTT
T ss_pred CCEEEeCcEEEEEEEcCCe--EEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCC
Confidence 9999999999999873333 345554 56 67999999999999999986 33 36666 46889999999999999
Q ss_pred EEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcc-cCCCCCCeeEEeccCceeEEeecCC------C
Q 013914 292 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTV-TGYDYLPYFYSRAFDLSWQFYGDNV------G 364 (434)
Q Consensus 292 iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~g~~~------~ 364 (434)
|||+|||++.+ ..+..|..||+.||.||++... .. ..|..+|++.+. +..+..+|.++ |
T Consensus 304 IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~~p~~~~~--~~~~a~vG~~e~~a~~~g 369 (464)
T 2a8x_A 304 IYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAET--LTLGDHRMLPRATFC--QPNVASFGLTEQQARNEG 369 (464)
T ss_dssp EEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCC--CCCCCGGGSCEEECS--SSEEEEEECCHHHHHHTT
T ss_pred EEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCC--cccCCCCCCCEEEEC--CCCeEEEcCCHHHHHhcC
Confidence 99999999754 4577899999999999997321 12 345667866544 45566668764 2
Q ss_pred CEEEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH-HHHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 365 DTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 365 ~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
..+..... .+. ....+|+|++++ +++|||+|++|+.+.+ ++.++.||++++|++|+..+..+.++|.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 448 (464)
T 2a8x_A 370 YDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSE 448 (464)
T ss_dssp CCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTH
T ss_pred CCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHH
Confidence 22222211 111 245679998884 8999999999999877 59999999999999988776666666654
No 36
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.8e-47 Score=375.66 Aligned_cols=397 Identities=23% Similarity=0.280 Sum_probs=283.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCccCccccCCCC----------CCCCC----
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----------TARLP---- 64 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----------~~~~~---- 64 (434)
+.++||+|||||+||+++|..|++.|.+ |+|||+++..+.. .+..++.++.... ...++
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFK---TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCC---EEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 3468999999999999999999999987 9999998543211 0011111110000 00000
Q ss_pred --CcccccCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcccccCCCC
Q 013914 65 --GFHVCVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGV 134 (434)
Q Consensus 65 --~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~ 134 (434)
.+...... ........++++.+++++.++.+. ++.....+.+.+| .+++||++|+|||+.|+.|+ +
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~---~ 156 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLP---G 156 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECCBT---T
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCC---C
Confidence 00000000 000011234556799999986554 6654334545566 67999999999999998887 4
Q ss_pred CCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHH
Q 013914 135 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 214 (434)
Q Consensus 135 ~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~ 214 (434)
+|.+..++++ ..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 157 ~g~~~~~v~~---~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~ 227 (470)
T 1dxl_A 157 VTIDEKKIVS---STGALAL----S-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRS 227 (470)
T ss_dssp BCCCSSSEEC---HHHHTTC----S-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHH
T ss_pred CCCCcccEEe---HHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHH
Confidence 5554445553 3333322 1 14789999999999999999999999999999999999985 899999999999
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcEEEEEeC---CC--cEEECCEEEEcccCccChhh--hh-ccccc-cCCcEEeCCCC
Q 013914 215 YANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFF 285 (434)
Q Consensus 215 l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~ 285 (434)
+++.||+++++++|.+++.++++ ..+.+. +| +++++|.|++|+|++||+++ ++ .++.. ++|+|.||+++
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 305 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDG--VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERF 305 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSS--EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTC
T ss_pred HHHcCCEEEeCCEEEEEEEcCCe--EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCC
Confidence 99999999999999999873333 345543 44 68999999999999999987 33 35666 46889999999
Q ss_pred CCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC--
Q 013914 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-- 363 (434)
Q Consensus 286 ~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-- 363 (434)
||++|+|||+|||+..+ ..+..|..||+.||.||++.. ....|..+|++.+ ++..+..+|.++
T Consensus 306 ~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~--~~~~~a~vG~~e~~ 370 (470)
T 1dxl_A 306 STNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKV---GHVDYDKVPGVVY--TNPEVASVGKTEEQ 370 (470)
T ss_dssp BCSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSC---CCCCTTSCCEEEC--SSSEEEEEECCHHH
T ss_pred ccCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCC---cCCCCCCCCEEEE--CCCceEEEcCCHHH
Confidence 99999999999999754 457789999999999999742 1244556676544 455566668764
Q ss_pred ----CCEEEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCC
Q 013914 364 ----GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 428 (434)
Q Consensus 364 ----~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~ 428 (434)
|..+..... .+. ....+|+|++++ +++|||+|++|+.+.++ +.++.||++++|++|+..+..+.+
T Consensus 371 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~P 450 (470)
T 1dxl_A 371 VKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHP 450 (470)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 222222211 111 245679998884 79999999999998885 999999999999998887766666
Q ss_pred Cccc
Q 013914 429 SFAS 432 (434)
Q Consensus 429 ~~~~ 432 (434)
+|.+
T Consensus 451 t~~e 454 (470)
T 1dxl_A 451 TMSE 454 (470)
T ss_dssp CTTH
T ss_pred ChHH
Confidence 6654
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.4e-48 Score=384.15 Aligned_cols=395 Identities=21% Similarity=0.256 Sum_probs=284.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEe---------CCCCCCC---CCCccCccccCCCCC----CCCCCc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIIS---------KEAVAPY---ERPALSKAYLFPEGT----ARLPGF 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~~V~vie---------~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~ 66 (434)
.++||+|||||++|+++|.+|++ .|.+ |+||| ++...+- ..|..++.++..... ...+.+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~ 78 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKR---VAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGF 78 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCE---EEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999999999 8987 99999 3321110 001111111110000 000000
Q ss_pred ccccC-----CCC--------------CCCChhhHhhc-CcEEEcCCeeEEEECCCCEEEcc-----CC---cEEEcceE
Q 013914 67 HVCVG-----SGG--------------ERLLPEWYKEK-GIELILSTEIVRADIASKTLLSA-----TG---LIFKYQIL 118 (434)
Q Consensus 67 ~~~~~-----~~~--------------~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~-----~~---~~~~~d~l 118 (434)
..... ... .......+++. +++++.+ .+..++. +++.+. ++ .++.||+|
T Consensus 79 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~l 155 (490)
T 1fec_A 79 GWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYI 155 (490)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEE
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEE
Confidence 00000 000 00112234556 9999998 5666764 456553 56 67999999
Q ss_pred EEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhC---CCeEEEEccC
Q 013914 119 VIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN---NIDVSMVYPE 195 (434)
Q Consensus 119 vlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~---g~~v~lv~~~ 195 (434)
|+|||++|+.|+ ++|.+ .+ .+..++..+. ..+++++|||+|++|+|+|..|.+. |.+|+++++.
T Consensus 156 viAtGs~p~~p~---i~g~~--~~---~~~~~~~~~~-----~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~ 222 (490)
T 1fec_A 156 LLATGSWPQHLG---IEGDD--LC---ITSNEAFYLD-----EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRG 222 (490)
T ss_dssp EECCCEEECCCC---SBTGG--GC---BCHHHHTTCS-----SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred EEeCCCCCCCCC---CCCcc--ce---ecHHHHhhhh-----hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcC
Confidence 999999998877 45542 22 2344433221 1478999999999999999999999 9999999999
Q ss_pred CccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--h-hccc
Q 013914 196 PWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQV 272 (434)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~--~-~~~~ 272 (434)
+++++. +++++.+.+.+.+++.||+++++++|+++..++++. ..+.+.+|+++++|.||+|+|++|+++. + ..++
T Consensus 223 ~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 223 DMILRG-FDSELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp SSSSTT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTC
T ss_pred CCcccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCc
Confidence 999986 899999999999999999999999999998743333 4678889989999999999999999973 3 3466
Q ss_pred cc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEec
Q 013914 273 AE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRA 351 (434)
Q Consensus 273 ~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~ 351 (434)
.. ++|+|.||+++||++|+|||+|||++.+ .++..|..||+.+|.||++... ....|..+|+..++.
T Consensus 301 ~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~~ 368 (490)
T 1fec_A 301 EVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAAFVDTVFANKP--RATDHTKVACAVFSI 368 (490)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCC--CCCCCSSCCEEECCS
T ss_pred cCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCC--CcCCCCCccEEEECC
Confidence 66 4789999999999999999999999643 5788899999999999997532 125667778765554
Q ss_pred cCceeEEeecCCC------CEEEEcC--CCc------ccCCCcEE-EEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHc
Q 013914 352 FDLSWQFYGDNVG------DTVLFGD--NDL------ASATHKFG-TYWIK--DGKVVGVFLESGTPEEN-KAIAKVARV 413 (434)
Q Consensus 352 ~~~~~~~~g~~~~------~~~~~~~--~~~------~~~~~~~~-~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~ 413 (434)
+ .+..+|.++. ..+.... ... ...+..|+ |++++ +++|||+|++|+++.++ +.++.||++
T Consensus 369 ~--~~a~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~ 446 (490)
T 1fec_A 369 P--PMGVCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKM 446 (490)
T ss_dssp S--CEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHT
T ss_pred C--CeEEEeCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHc
Confidence 4 4555676542 1222111 110 02356799 98884 79999999999998885 999999999
Q ss_pred CCCCCChhhhhccCCCcccc
Q 013914 414 QPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 414 ~~~~~~~~~l~~~~~~~~~~ 433 (434)
++|++|+..+.-+.+++.+.
T Consensus 447 ~~t~~~l~~~~~~hPt~~e~ 466 (490)
T 1fec_A 447 GAKISDFYNTIGVHPTSAEE 466 (490)
T ss_dssp TCBHHHHHTSCCCSSCSGGG
T ss_pred CCCHHHHhccccCCCCHHHH
Confidence 99999888777777776653
No 38
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=7.5e-48 Score=378.96 Aligned_cols=394 Identities=21% Similarity=0.255 Sum_probs=285.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCCC----CCCCCCcccccCC----
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGS---- 72 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---- 72 (434)
.++||+|||||++|+++|..|+++|.+ |+|||++...+ +..|..++.++.... ....+.+......
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKR---VAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCE---EEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 468999999999999999999999987 99999954311 000111111100000 0000000000000
Q ss_pred -------------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEcc-CCcEEEcceEEEecCCCcc-cccCCCCCCC
Q 013914 73 -------------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVL-RLTDFGVEGA 137 (434)
Q Consensus 73 -------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~lvlAtG~~~~-~~~~~~~~g~ 137 (434)
.........+.+.+++++.+ .+..++ .+.+.+. ++..+.||++|+|||+.|. .|+ ++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~---i~G~ 175 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--EHTLELSVTGERISAEKILIATGAKIVSNSA---IKGS 175 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEETTTCCEEEEEEEEECCCEEECCC-----CBTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--CCEEEEecCCeEEEeCEEEEccCCCcccCCC---CCCc
Confidence 00011223455679999997 566665 4566665 6778999999999999998 776 4554
Q ss_pred CCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHh
Q 013914 138 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 138 ~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
+ .+++........ ..+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 176 ~--~~~~~~~~~~~~--------~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~ 244 (484)
T 3o0h_A 176 D--LCLTSNEIFDLE--------KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVA 244 (484)
T ss_dssp G--GSBCTTTGGGCS--------SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c--ccccHHHHHhHH--------hcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHH
Confidence 3 122222222111 14789999999999999999999999999999999998886 799999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCCCCCCCCcEE
Q 013914 218 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVY 293 (434)
Q Consensus 218 ~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~iy 293 (434)
.||+++++++|++++.+++ . ..+.+.+|+++++|.||+|+|++|+++++ ..++.. ++|+|.||+++||++|+||
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~-~-v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iy 322 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTEN-C-YNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIW 322 (484)
T ss_dssp HTCEEESSCCEEEEEECSS-S-EEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEE
T ss_pred CCCEEEeCCEEEEEEeeCC-E-EEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEE
Confidence 9999999999999987433 3 47888999999999999999999999853 346666 6788999999999999999
Q ss_pred EecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCEE
Q 013914 294 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTV 367 (434)
Q Consensus 294 a~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~ 367 (434)
|+|||++.+ ..+..|..||+.+|.||++.... ...+..+|+.+++.+++ ..+|+++ +..+
T Consensus 323 a~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~~~~~~p~~--a~vGlte~~a~~~g~~~ 388 (484)
T 3o0h_A 323 AVGDVTGHI----------QLTPVAIHDAMCFVKNAFENTST--TPDYDLITTAVFSQPEI--GTVGLSEEDALHRYKRV 388 (484)
T ss_dssp ECGGGGTSC----------CCHHHHHHHHHHHHHHHHC---C--CCCCTTCCEEECCSSCE--EEEECCHHHHHHHCSEE
T ss_pred EEEecCCCC----------cCHHHHHHHHHHHHHHHcCCCCC--cCCCCCCcEEEECCCCE--EEeeCCHHHHHHcCCCE
Confidence 999999743 56778999999999999975432 25677788877665554 4557665 3222
Q ss_pred EEcCCCc--------ccCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013914 368 LFGDNDL--------ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 368 ~~~~~~~--------~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~~ 433 (434)
.....+. .....+++|+++ ++++|||+|++|+++.++ +.++.||++++|++|+..+.-+.+++++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 465 (484)
T 3o0h_A 389 EIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEE 465 (484)
T ss_dssp EEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGG
T ss_pred EEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHH
Confidence 2221111 023578899887 479999999999999885 99999999999999888877777776654
No 39
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=9.6e-48 Score=378.18 Aligned_cols=398 Identities=21% Similarity=0.263 Sum_probs=281.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCccCccccCCCC-----CCCCCCccccc-C
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG-----TARLPGFHVCV-G 71 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~-~ 71 (434)
|++++||+|||||+||+++|..|++.|.+ |+|||+++..+.. .+..++.++.... ......+.... .
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFN---TACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 44578999999999999999999999986 9999996542200 0011111111000 00000000000 0
Q ss_pred C---CC--------------CCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cE------EEcceEEEecCCCc
Q 013914 72 S---GG--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LI------FKYQILVIATGSTV 126 (434)
Q Consensus 72 ~---~~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~------~~~d~lvlAtG~~~ 126 (434)
. .. .....+++++.+++++.++.+. .+....++.+.++ .+ +.||+||+|||+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0 00 0002234566799999986554 2222223445555 46 99999999999988
Q ss_pred ccccCCCCCCCCCC--CeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCC
Q 013914 127 LRLTDFGVEGADAK--NIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFT 204 (434)
Q Consensus 127 ~~~~~~~~~g~~~~--~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~ 204 (434)
+.+ ++.+.. .++ +..++..+. . .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. ++
T Consensus 158 ~~~-----~g~~~~~~~v~---~~~~~~~~~----~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~ 223 (478)
T 1v59_A 158 TPF-----PGIEIDEEKIV---SSTGALSLK----E-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-MD 223 (478)
T ss_dssp CCC-----TTCCCCSSSEE---CHHHHTTCS----S-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-SC
T ss_pred CCC-----CCCCCCCceEE---cHHHHHhhh----c-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-cC
Confidence 432 333222 233 444443321 1 4789999999999999999999999999999999999985 89
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-----CCcEEECCEEEEcccCccChh--hhh-ccccc-c
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-----DGRTLEADIVVVGVGGRPLIS--LFK-GQVAE-N 275 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~-----~g~~~~~D~vi~a~G~~p~~~--~~~-~~~~~-~ 275 (434)
+++.+.+.+.+++.||+++++++|+++...+++....+.+. +++++++|.|++|+|++|+++ +++ .++.. +
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~ 303 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDK 303 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCT
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCC
Confidence 99999999999999999999999999986213333456654 456899999999999999997 443 45666 4
Q ss_pred CCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCce
Q 013914 276 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS 355 (434)
Q Consensus 276 ~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~ 355 (434)
+|+|.||+++||+.|+|||+|||+..+ ..+..|..||+.||.||++... ...|..+|++++..+++
T Consensus 304 ~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~- 369 (478)
T 1v59_A 304 RGRLVIDDQFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAAVEMLKTGHG---HVNYNNIPSVMYSHPEV- 369 (478)
T ss_dssp TSCBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCC---CCCTTSCCEEECSSSEE-
T ss_pred CCCEeECcCCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHHcCCCC---CCCCCCCCEEEEcCCcE-
Confidence 788999999999999999999999854 4567899999999999997431 25677788877766554
Q ss_pred eEEeecCC------CCEEEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHH-HHHHHHHHHcCCCCC
Q 013914 356 WQFYGDNV------GDTVLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEE-NKAIAKVARVQPSVE 418 (434)
Q Consensus 356 ~~~~g~~~------~~~~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~-~~~~~~~i~~~~~~~ 418 (434)
..+|.++ |..+..... .+. ....+++|++++ +++|+|++++|+.+.+ ++.++.+|++++|++
T Consensus 370 -a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~ 448 (478)
T 1v59_A 370 -AWVGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAE 448 (478)
T ss_dssp -EEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred -EEEECCHHHHHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 5557654 322222111 111 234678888774 7999999999999877 599999999999999
Q ss_pred ChhhhhccCCCccc
Q 013914 419 SLDVLKNEGLSFAS 432 (434)
Q Consensus 419 ~~~~l~~~~~~~~~ 432 (434)
|+..+..+.++|.+
T Consensus 449 ~l~~~~~~~Pt~~e 462 (478)
T 1v59_A 449 DVARVCHAHPTLSE 462 (478)
T ss_dssp HHHTSCCCTTCTTH
T ss_pred HHhhCCCCCCCHHH
Confidence 88877777776654
No 40
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.8e-47 Score=370.72 Aligned_cols=394 Identities=21% Similarity=0.279 Sum_probs=280.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCC----CCCCCCCcccccCCC----
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE----GTARLPGFHVCVGSG---- 73 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---- 73 (434)
++||+|||||+||+++|..|++.|.+ |+|||++...+ ...+..++.++... .......+.......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQK---VTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999886 99999983211 00011111111000 000000000000000
Q ss_pred -------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC-cEEEcceEEEecCCCcccccCCCCCCCCC
Q 013914 74 -------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVLRLTDFGVEGADA 139 (434)
Q Consensus 74 -------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lvlAtG~~~~~~~~~~~~g~~~ 139 (434)
......+++++.+++++.++.+ .++.....+.+.++ .++.||+||+|||++|+.|+. ++.+.
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~---~g~~~ 155 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPN---FKFSN 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EEETTEEEEEETTEEEEEECSEEEECCCEEECCBTT---BCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCC---CCccc
Confidence 0001133455679999998554 36654445555566 679999999999999988874 55432
Q ss_pred CCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcC
Q 013914 140 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKG 219 (434)
Q Consensus 140 ~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~G 219 (434)
.++ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.|
T Consensus 156 -~v~---~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~g 225 (455)
T 1ebd_A 156 -RIL---DSTGALNL----G-EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKG 225 (455)
T ss_dssp -SEE---CHHHHHTC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTT
T ss_pred -eEe---cHHHHhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCC
Confidence 233 44444332 1 14789999999999999999999999999999999999886 79999999999999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeC---CCcEEECCEEEEcccCccChhh--hh-ccccc-cCCcEEeCCCCCCCCCcE
Q 013914 220 IKIIKGTVAVGFTTNADGEVKEVKLK---DGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFKTSADDV 292 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~v~~v~~~---~g~~~~~D~vi~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~i 292 (434)
|+++++++|++++.++++ ..+.+. +++++++|.|++|+|++|++++ ++ .++.. ++|+|.||+++||++|+|
T Consensus 226 v~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~I 303 (455)
T 1ebd_A 226 VEVVTNALAKGAEEREDG--VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNI 303 (455)
T ss_dssp CEEEESEEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred CEEEeCCEEEEEEEeCCe--EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCE
Confidence 999999999999863322 345543 4568999999999999999986 33 35666 468899999999999999
Q ss_pred EEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCE
Q 013914 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT 366 (434)
Q Consensus 293 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~ 366 (434)
||+|||+..+ ..+..|..||+.||.||.+.. ....|..+|++.+. +..+..+|.++ +..
T Consensus 304 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~--~~~~a~vG~~e~~a~~~g~~ 368 (455)
T 1ebd_A 304 FAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHP---SAVDYVAIPAVVFS--DPECASVGYFEQQAKDEGID 368 (455)
T ss_dssp EECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCC---CCCCCSCCCEEECS--SSCEEEEECCHHHHHTTTCC
T ss_pred EEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC---ccCCCCCCCEEEEC--CCceEEEeCCHHHHHhcCCC
Confidence 9999999754 457788999999999999742 12445667765544 44555667654 222
Q ss_pred EEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 367 VLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 367 ~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
+..... .+. ....+|+|++++ +++|||+|++|+.+.++ +.++.||++++|++|+..+.-+.++|.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 445 (455)
T 1ebd_A 369 VIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGE 445 (455)
T ss_dssp EEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTH
T ss_pred EEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 222211 111 245679998884 89999999999998885 9999999999999988877666666654
No 41
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.2e-46 Score=367.88 Aligned_cols=395 Identities=20% Similarity=0.251 Sum_probs=285.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCCC----CCCCCCcccccCC--C
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG----TARLPGFHVCVGS--G 73 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~ 73 (434)
++++||+|||||+||+++|.+|++.|.+ |+|||++...+ +..|.+++.++.... ....+.+.+.... .
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKR---VALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTL 78 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---C
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCc---EEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Confidence 4579999999999999999999999887 99999984311 000111111110000 0000000000000 0
Q ss_pred C---------------CCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCC
Q 013914 74 G---------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 74 ~---------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~ 138 (434)
. ...+...+.+.+++++.+ .+..++ .++|.+ ++.++.||+||+|||+.|+.|+ ++|.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~-~g~~~~~d~lviAtGs~p~~p~---i~G~~ 151 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVD--AHTIEV-EGQRLSADHIVIATGGRPIVPR---LPGAE 151 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEE-TTEEEEEEEEEECCCEEECCCS---CTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEcc--CCEEEE-CCEEEEcCEEEECCCCCCCCCC---CCCcc
Confidence 0 001122345679999998 455555 456766 6678999999999999998877 46542
Q ss_pred CCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhc
Q 013914 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
.+ .+..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 152 --~~---~~~~~~~~~----~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~ 220 (463)
T 2r9z_A 152 --LG---ITSDGFFAL----Q-QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHAQ 220 (463)
T ss_dssp --GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHT
T ss_pred --ce---ecHHHHhhh----h-ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHHC
Confidence 12 234444332 1 14789999999999999999999999999999999998876 7999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeCCCc-EEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCCCCCCCCcEE
Q 013914 219 GIKIIKGTVAVGFTTNADGEVKEVKLKDGR-TLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVY 293 (434)
Q Consensus 219 GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~-~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~iy 293 (434)
||+++++++|++++.++++ ..+.+.+|+ ++++|.|++|+|++|+++.+ ..++.. ++|+|.||+++||++|+||
T Consensus 221 gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iy 298 (463)
T 2r9z_A 221 GIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVY 298 (463)
T ss_dssp TCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEE
T ss_pred CCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEE
Confidence 9999999999999873333 578889998 89999999999999999732 336666 5788999999999999999
Q ss_pred EecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC-------CCE
Q 013914 294 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------GDT 366 (434)
Q Consensus 294 a~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~~~ 366 (434)
|+|||++.+ .++..|..||+.+|.||++.... ....|..+|+.+++.+++.. +|+++ |..
T Consensus 299 a~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~p~~~~~~~~~a~--vGl~e~~a~~~~g~~ 365 (463)
T 2r9z_A 299 ALGDITGRD----------QLTPVAIAAGRRLAERLFDGQSE-RKLDYDNIPTVVFAHPPLSK--VGLSEPEARERLGDV 365 (463)
T ss_dssp ECGGGGTSC----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCSSCCEEECCSSCEEE--EECCHHHHHHHHCSC
T ss_pred EEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCEEEeCCCCeEE--EcCCHHHHHhcCCCC
Confidence 999998743 56788999999999999975321 11456778887766555544 46542 221
Q ss_pred EEE-----cCCCc---ccCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCcccc
Q 013914 367 VLF-----GDNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 367 ~~~-----~~~~~---~~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~~ 433 (434)
+.. ..... ......|+|+++ ++++|||+|++|+++.++ +.++.||+.++|++|+..+..+.+++.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 443 (463)
T 2r9z_A 366 LTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEE 443 (463)
T ss_dssp EEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGGG
T ss_pred EEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHH
Confidence 211 11111 123567888887 479999999999998885 99999999999999888777777766553
No 42
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=5.5e-47 Score=370.66 Aligned_cols=391 Identities=22% Similarity=0.295 Sum_probs=281.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCCC---------CCCC---CCcccc
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPEG---------TARL---PGFHVC 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~~---------~~~~---~~~~~~ 69 (434)
++||+|||||+||+++|..|++.|.+ |+|||+++..+ +..+..++.++.... ...+ +.+.+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLK---VLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 58999999999999999999999886 99999986311 001111221111000 0000 000000
Q ss_pred --cCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCC
Q 013914 70 --VGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN 141 (434)
Q Consensus 70 --~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~ 141 (434)
... ........++++.+++++.++.+. ++ .+++.+. ++++.||+||+|||++|+.|+ ++++ + ..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~-g~~~~~d~lViATGs~p~~p~--gi~~-~-~~ 154 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG--PKEVEVG-GERYGAKSLILATGSEPLELK--GFPF-G-ED 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE--TTEEEET-TEEEEEEEEEECCCEEECCBT--TBCC-S-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc--CCEEEEc-cEEEEeCEEEEcCCCCCCCCC--CCCC-C-Cc
Confidence 000 000001234566799999985443 54 4677766 678999999999999998775 3555 2 24
Q ss_pred eEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcE
Q 013914 142 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIK 221 (434)
Q Consensus 142 v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~ 221 (434)
++ +..++..+ ....+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||+
T Consensus 155 v~---~~~~~~~l----~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 155 VW---DSTRALKV----EEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEKEGIR 226 (464)
T ss_dssp EE---CHHHHTCG----GGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred EE---cHHHHHhh----hhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhcCCE
Confidence 44 44444332 2214789999999999999999999999999999999999885 7999999999999999999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEeC-C--Cc--EEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCCCCCCCCcE
Q 013914 222 IIKGTVAVGFTTNADGEVKEVKLK-D--GR--TLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDV 292 (434)
Q Consensus 222 ~~~~~~v~~i~~~~~g~v~~v~~~-~--g~--~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~i 292 (434)
++++++|++++.++ +. ..+.+. + |+ ++++|.|++|+|++|+++++ ..++.. ++|+|.||+++||++|+|
T Consensus 227 i~~~~~v~~i~~~~-~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~I 304 (464)
T 2eq6_A 227 VRTKTKAVGYEKKK-DG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGV 304 (464)
T ss_dssp EECSEEEEEEEEET-TE-EEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred EEcCCEEEEEEEeC-CE-EEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCE
Confidence 99999999998732 22 356665 6 76 89999999999999999863 345666 578899999999999999
Q ss_pred EEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCE
Q 013914 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT 366 (434)
Q Consensus 293 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~ 366 (434)
||+|||++.+ ..+..|..||+.||.||++.. ....+. +|++..+ +..+..+|.++ |..
T Consensus 305 ya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~---~~~~~~-~p~~~~~--~~~~a~vG~~e~~a~~~g~~ 368 (464)
T 2eq6_A 305 YAIGDAARPP----------LLAHKAMREGLIAAENAAGKD---SAFDYQ-VPSVVYT--SPEWAGVGLTEEEAKRAGYK 368 (464)
T ss_dssp EECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCC-CCEEECS--SSEEEEEECCHHHHHHTTCC
T ss_pred EEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCC---cccCCC-CCeEEEC--CCCEEEEeCCHHHHHhcCCC
Confidence 9999999754 457789999999999999743 124555 7765443 45556667664 222
Q ss_pred EEEcCC-----Ccc---cCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 367 VLFGDN-----DLA---SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 367 ~~~~~~-----~~~---~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
+..+.. .+. ....+|+|++++ +++|||+|++|+.+.++ +.++.||++++|++|+..+.-+.++|.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 445 (464)
T 2eq6_A 369 VKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSE 445 (464)
T ss_dssp EEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTH
T ss_pred EEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHH
Confidence 222211 111 235678998884 79999999999998885 9999999999999988876666666653
No 43
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.3e-46 Score=368.34 Aligned_cols=402 Identities=20% Similarity=0.226 Sum_probs=275.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCC---------CCCCC---CCcccc
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE---------GTARL---PGFHVC 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~---------~~~~~---~~~~~~ 69 (434)
++||+|||||+||+++|..|++.|.+ |+|||++...+ +..|..++.++... ....+ +.+.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAK---VALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 48999999999999999999999887 99999985311 00111111111000 00000 000000
Q ss_pred --cC------CCCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccC-------------CcEEEcceEEEecCCCccc
Q 013914 70 --VG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-------------GLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 70 --~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-------------~~~~~~d~lvlAtG~~~~~ 128 (434)
.. ..........+++.+++++.++ +..++ .+++.+.+ +.++.||+||+|||+.|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id--~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLS--ENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEee--CCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 00 0000011233456799999884 33333 34555433 5679999999999999988
Q ss_pred ccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHH
Q 013914 129 LTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIA 208 (434)
Q Consensus 129 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~ 208 (434)
|+ ++|.+ .+++ ..++..+ . .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.
T Consensus 156 p~---i~G~~--~~~~---~~~~~~~----~--~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~ 220 (500)
T 1onf_A 156 PP---VKGIE--NTIS---SDEFFNI----K--ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVI 220 (500)
T ss_dssp CS---CTTGG--GCEE---HHHHTTC----C--CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHH
T ss_pred CC---CCCCC--cccC---HHHHhcc----C--CCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhH
Confidence 77 56642 2333 2333221 1 2789999999999999999999999999999999999985 899999
Q ss_pred HHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE-EECCEEEEcccCccChh-h-h-hccccccCCcEEeCCC
Q 013914 209 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT-LEADIVVVGVGGRPLIS-L-F-KGQVAENKGGIETDDF 284 (434)
Q Consensus 209 ~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~-~~~D~vi~a~G~~p~~~-~-~-~~~~~~~~g~i~vd~~ 284 (434)
+.+.+.+++.||+++++++|++++.++++. ..+.+.+|++ +++|.|++|+|++|+++ + + ..++..++|+|.||++
T Consensus 221 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~ 299 (500)
T 1onf_A 221 NVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDEN 299 (500)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTT
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCC
Confidence 999999999999999999999998743343 4678889988 99999999999999996 3 3 3356557788999999
Q ss_pred CCCCCCcEEEecccccccccc-----------------------cC-cceecccHHHHHHHHHHHHHHHhccCCCCcccC
Q 013914 285 FKTSADDVYAVGDVATFPMKL-----------------------YR-EMRRVEHVDHARKSAEQAVKTIMATEGGKTVTG 340 (434)
Q Consensus 285 ~~t~~~~iya~GD~~~~~~~~-----------------------~~-~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 340 (434)
+||++|+|||+|||+..+... .+ ....+.++..|.+||+.||+||++... ....
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~ 377 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKT--RKTN 377 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTT--CCCC
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCC--ccCC
Confidence 999999999999999532100 00 002346889999999999999997432 2255
Q ss_pred CCCCCeeEEeccCceeEEeecCC-------C-CEEEE-----cCCC-------cccCCCcEEEEEE--eCCEEEEEEEec
Q 013914 341 YDYLPYFYSRAFDLSWQFYGDNV-------G-DTVLF-----GDND-------LASATHKFGTYWI--KDGKVVGVFLES 398 (434)
Q Consensus 341 ~~~~p~~~~~~~~~~~~~~g~~~-------~-~~~~~-----~~~~-------~~~~~~~~~~~~~--~~~~ilG~~~~g 398 (434)
|..+|++.++.++ +..+|.++ | ..+.. .... .......|+|+++ ++++|||+|++|
T Consensus 378 ~~~~p~~~~~~~~--~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g 455 (500)
T 1onf_A 378 YKLIPTVIFSHPP--IGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIG 455 (500)
T ss_dssp CSSCCEEECCSSC--EEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEES
T ss_pred CCCCCeEEEcCcc--eEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEEC
Confidence 7778876665454 45557653 2 11111 1111 1123567889888 579999999999
Q ss_pred CCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 399 GTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 399 ~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
+++.++ +.++.||+.++|++|+..+.-+.+++++
T Consensus 456 ~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e 490 (500)
T 1onf_A 456 LNADEIVQGFAVALKMNATKKDFDETIPIHPTAAE 490 (500)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTT
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHH
Confidence 998885 9999999999999988877777766654
No 44
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=9.4e-48 Score=378.34 Aligned_cols=398 Identities=16% Similarity=0.094 Sum_probs=278.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC---CCCccCccccCCC----CCCCCCCcccccCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY---ERPALSKAYLFPE----GTARLPGFHVCVGSG 73 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 73 (434)
|+..++||+|||||+||++||..|++.|.+ |+|||++...+- ..|.+++.++... .....+.+.......
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDK---VVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSC---EEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 333358999999999999999999999987 999999753210 0111122221110 001111111100000
Q ss_pred --CC----CCC-----------hhhHhh-cCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCC
Q 013914 74 --GE----RLL-----------PEWYKE-KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVE 135 (434)
Q Consensus 74 --~~----~~~-----------~~~~~~-~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~ 135 (434)
.. ... ...+.. .+++++.+.... .+.+++.+.++.++.||++|||||++|+.|+. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~---~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~---~ 154 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKF---LDEHTLQVDDHSQVIAKRIVIATGSRPNYPEF---L 154 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEE---EETTEEEETTTEEEEEEEEEECCCEECCCCHH---H
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEE---ecCCEEEEcCCcEEEeCEEEEccCCCCcCCCC---C
Confidence 00 000 011111 234555553222 23567888788899999999999999988773 3
Q ss_pred CCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHH
Q 013914 136 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 215 (434)
Q Consensus 136 g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l 215 (434)
+.....+++. .+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 155 ~~~~~~v~t~---~~~~~~-----~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (492)
T 3ic9_A 155 AAAGSRLLTN---DNLFEL-----NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTF 225 (492)
T ss_dssp HTTGGGEECH---HHHTTC-----SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHH
T ss_pred CccCCcEEcH---HHHhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHH
Confidence 3333445533 333221 114799999999999999999999999999999999999876 7999999999999
Q ss_pred HhcCcEEEcCCeEEEEEecCCCcEEEEEeC--CC--cEEECCEEEEcccCccChhhh---hccccc-cCCcEEeC-CCCC
Q 013914 216 ANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETD-DFFK 286 (434)
Q Consensus 216 ~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~--~g--~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd-~~~~ 286 (434)
++. |++++++++++++.++++ + .+.+. +| +++++|.|++|+|++|+++++ ..++.. ++|+|.|| +++|
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~ 302 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKEDA-V-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQ 302 (492)
T ss_dssp HTT-SEEETTCEEEEEEECSSS-E-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCB
T ss_pred hhC-cEEEECCEEEEEEEcCCE-E-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECccccc
Confidence 998 999999999999874333 3 45553 67 689999999999999999863 336666 67899999 9999
Q ss_pred CCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCCC--
Q 013914 287 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG-- 364 (434)
Q Consensus 287 t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~-- 364 (434)
|++|+|||+|||++.+ ..+..|..||+.||.||++.... ....+..+|+..++. ..+..+|+++.
T Consensus 303 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~--p~~a~vGlte~~a 369 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTL----------TLLHEAADDGKVAGTNAGAYPVI-AQGQRRAPLSVVFTE--PQVASVGLSLRQI 369 (492)
T ss_dssp CSSTTEEECGGGGTSS----------CSHHHHHHHHHHHHHHHHHTTSC-CEECCCCCEEEECSS--SEEEEEESCHHHH
T ss_pred CCCCCEEEEEecCCCC----------ccHHHHHHHHHHHHHHHcCCCCC-cccCCCCCcEEEECC--CCeEEecCCHHHH
Confidence 9999999999999864 46778999999999999974221 124555666655544 44555576641
Q ss_pred ---------CEEEEcCCC-----cc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhh
Q 013914 365 ---------DTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLK 424 (434)
Q Consensus 365 ---------~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~ 424 (434)
..+..+..+ +. ..+.+|+|+++ ++++|||+|++|+++.++ +.++.||++++|++|+..+.
T Consensus 370 ~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 449 (492)
T 3ic9_A 370 EDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP 449 (492)
T ss_dssp HHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC
T ss_pred HhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC
Confidence 122222111 11 24568999887 579999999999999886 99999999999999887776
Q ss_pred ccCCCccc
Q 013914 425 NEGLSFAS 432 (434)
Q Consensus 425 ~~~~~~~~ 432 (434)
-+.+++++
T Consensus 450 ~~hPt~~e 457 (492)
T 3ic9_A 450 FYHPVIEE 457 (492)
T ss_dssp CCTTCTHH
T ss_pred CCCCChHH
Confidence 66666554
No 45
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.9e-47 Score=377.02 Aligned_cols=399 Identities=18% Similarity=0.174 Sum_probs=278.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC------CCc------cCccccCCCCC----CCCCCcc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE------RPA------LSKAYLFPEGT----ARLPGFH 67 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~------~~~------~~~~~~~~~~~----~~~~~~~ 67 (434)
.++||+|||||+||++||..|++.|.+ |+|||+++..++. ..+ .++.++..... .....+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKK---VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999987 9999996421111 111 11111100000 0000000
Q ss_pred cccCCC------------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCc--EEEcceEEEecCCCcc
Q 013914 68 VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVL 127 (434)
Q Consensus 68 ~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~ 127 (434)
...... ........++..+++++.+ .+..+++....+...+++ ++.||+||||||++|+
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 000000 0000112345578999997 666677665566665664 7999999999999998
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHH
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 207 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~ 207 (434)
.|+ ++|.+. .+ .+..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++. .+++. +++++
T Consensus 187 ~p~---i~G~~~-~~---~t~~~~~~l----~-~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~ 252 (519)
T 3qfa_A 187 YLG---IPGDKE-YC---ISSDDLFSL----P-YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDM 252 (519)
T ss_dssp CCC---CTTHHH-HC---BCHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CCC---CCCccC-ce---EcHHHHhhh----h-hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHH
Confidence 886 566321 12 233333222 1 24788999999999999999999999999999984 66665 79999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCC---CcE-EEEEeCCC-c--EEECCEEEEcccCccChhhh---hccccc--c
Q 013914 208 AAFYEGYYANKGIKIIKGTVAVGFTTNAD---GEV-KEVKLKDG-R--TLEADIVVVGVGGRPLISLF---KGQVAE--N 275 (434)
Q Consensus 208 ~~~~~~~l~~~GV~~~~~~~v~~i~~~~~---g~v-~~v~~~~g-~--~~~~D~vi~a~G~~p~~~~~---~~~~~~--~ 275 (434)
.+.+.+.+++.||++++++.+.++...++ +.+ ..+...+| + ++++|.|++|+|++|+++++ ..++.. +
T Consensus 253 ~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 332 (519)
T 3qfa_A 253 ANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEK 332 (519)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTT
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCC
Confidence 99999999999999999988888865332 222 23334555 2 57899999999999999863 345666 3
Q ss_pred CCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCce
Q 013914 276 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS 355 (434)
Q Consensus 276 ~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~ 355 (434)
+|+|.||+++||++|+|||+|||+.... ..+..|..||+.||+||++.... ...|..+|+..++.+++
T Consensus 333 ~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~- 400 (519)
T 3qfa_A 333 TGKIPVTDEEQTNVPYIYAIGDILEDKV---------ELTPVAIQAGRLLAQRLYAGSTV--KCDYENVPTTVFTPLEY- 400 (519)
T ss_dssp TCCBCCCTTSBCSSTTEEECGGGBSSSC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSCE-
T ss_pred CCeEeeCCCCccCCCCEEEEEeccCCCC---------ccHHHHHHHHHHHHHHHcCCCCc--cCCCCcCcEEEECCCce-
Confidence 6889999999999999999999994221 56788999999999999976432 25677788776665555
Q ss_pred eEEeecCCCC--------EEE-----EcCCCc----ccCCCcEEEEEEe---CCEEEEEEEecCCHHHH-HHHHHHHHcC
Q 013914 356 WQFYGDNVGD--------TVL-----FGDNDL----ASATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQ 414 (434)
Q Consensus 356 ~~~~g~~~~~--------~~~-----~~~~~~----~~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~~~~i~~~ 414 (434)
..+|+++.+ .+. +..... ...+.+|+|++++ +++|||+|++|+++.++ +.++.||+++
T Consensus 401 -a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~ 479 (519)
T 3qfa_A 401 -GACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479 (519)
T ss_dssp -EEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred -EEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 455766421 111 111000 0135689998873 59999999999998885 9999999999
Q ss_pred CCCCChhhhhccCCCcccc
Q 013914 415 PSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 415 ~~~~~~~~l~~~~~~~~~~ 433 (434)
+|++||..+.-+.+++++.
T Consensus 480 ~t~~~l~~~~~~hPt~~E~ 498 (519)
T 3qfa_A 480 LTKKQLDSTIGIHPVCAEV 498 (519)
T ss_dssp CBHHHHHHSCCCTTCGGGG
T ss_pred CCHHHHhccccCCCChHHH
Confidence 9999888777777776653
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=4.2e-47 Score=373.78 Aligned_cols=398 Identities=20% Similarity=0.204 Sum_probs=280.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCCcc------CccccCCC------------
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERPAL------SKAYLFPE------------ 58 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~~~~------~~~~~~~~------------ 58 (434)
..|||+|||||+||++||..|+++|.+ |+|||+....+ +...++ ++.++...
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGAR---VACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCE---EEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 468999999999999999999999987 99999532111 111111 11110000
Q ss_pred --CCCCCCCcccc--cCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCc-EEEcceEEEecCCCcc
Q 013914 59 --GTARLPGFHVC--VGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL-IFKYQILVIATGSTVL 127 (434)
Q Consensus 59 --~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~ 127 (434)
.....+.+.+. ... .........++..+++++.+ ....++.....+.+.++. ++.||+||||||++|+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 00000000000 000 00000112345678999987 555556555556666664 7999999999999998
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHH
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 207 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~ 207 (434)
.|+ ++|.+.. .+ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++. .+++. +++++
T Consensus 164 ~p~---i~G~~~~-~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~ 229 (483)
T 3dgh_A 164 YPD---IPGAVEY-GI---TSDDLFSL----D-REPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQM 229 (483)
T ss_dssp CCS---STTHHHH-CB---CHHHHTTC----S-SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHH
T ss_pred CCC---CCCcccc-cC---cHHHHhhh----h-hcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHH
Confidence 887 5664321 11 33333221 1 14789999999999999999999999999999884 56665 79999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-----EEECCEEEEcccCccChhhh---hccccccCCcE
Q 013914 208 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-----TLEADIVVVGVGGRPLISLF---KGQVAENKGGI 279 (434)
Q Consensus 208 ~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~-----~~~~D~vi~a~G~~p~~~~~---~~~~~~~~g~i 279 (434)
.+.+.+.+++.||++++++.+.+++..+++.+ .+++.+++ ++++|.|++|+|++|+++++ ..++..+.|+|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i 308 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKI 308 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEE
Confidence 99999999999999999999999987444443 46665543 79999999999999999876 33566645999
Q ss_pred EeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEe
Q 013914 280 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFY 359 (434)
Q Consensus 280 ~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 359 (434)
.||+++||++|+|||+|||+.... ..+..|..||+.||+||++... ....|..+|+++++.++++ .+
T Consensus 309 ~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~~p~~a--~v 375 (483)
T 3dgh_A 309 PVDSQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGST--QRMDYKDVATTVFTPLEYA--CV 375 (483)
T ss_dssp CCCTTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCC--CCCCCTTCCEEECSSSEEE--EE
T ss_pred EECcCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCC--CcCCCCCCCEEEECCCccE--EE
Confidence 999999999999999999984221 5677899999999999997642 2256778888777766554 45
Q ss_pred ecCCC--------C--EEEEcCC-Cc------ccCCCcEEEEEEe---CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCC
Q 013914 360 GDNVG--------D--TVLFGDN-DL------ASATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQPSVE 418 (434)
Q Consensus 360 g~~~~--------~--~~~~~~~-~~------~~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~ 418 (434)
|+++. . .+..... +. ...+.+|+|++++ +++|||+|++|+++.++ +.++.||++++|++
T Consensus 376 Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 455 (483)
T 3dgh_A 376 GLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTIN 455 (483)
T ss_dssp ECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred eCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 76641 1 1111111 10 0135679998873 59999999999999885 99999999999999
Q ss_pred ChhhhhccCCCcccc
Q 013914 419 SLDVLKNEGLSFASK 433 (434)
Q Consensus 419 ~~~~l~~~~~~~~~~ 433 (434)
||..+--+.+++++.
T Consensus 456 ~l~~~~~~hPt~~e~ 470 (483)
T 3dgh_A 456 TLINTVGIHPTTAEE 470 (483)
T ss_dssp HHHTSCCCSSCSGGG
T ss_pred HHhhcccCCCChHHH
Confidence 887776666666553
No 47
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=8.7e-46 Score=361.81 Aligned_cols=392 Identities=22% Similarity=0.256 Sum_probs=280.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC----CCccCccccCCCC----CCCCCCcccccCC---C
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE----RPALSKAYLFPEG----TARLPGFHVCVGS---G 73 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~---~ 73 (434)
++||+|||||+||+++|..|++.|.+ |+|||+++..+.. .+..++.++.... ... +.+...... .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~~~~~ 76 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMK---VGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKGVELD 76 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECCEEEC
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCe---EEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCCCccC
Confidence 37999999999999999999999887 9999998543210 0111111110000 000 000000000 0
Q ss_pred C--------------CCCChhhHhhcCcEEEcCCeeEEEECCCCEEEcc-CCcEEEcceEEEecCCCcccccCCCCCCCC
Q 013914 74 G--------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVLRLTDFGVEGAD 138 (434)
Q Consensus 74 ~--------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~ 138 (434)
. ......++++.+++++.++.+ .+ +.+.+.+. ++.++.||+||+|||++|+.|+. ++.+
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~---~g~~ 150 (455)
T 2yqu_A 77 LPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FL--SERKVLVEETGEELEARYILIATGSAPLIPPW---AQVD 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ES--SSSEEEETTTCCEEEEEEEEECCCEEECCCTT---BCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cCCeEEEeeCCEEEEecEEEECCCCCCCCCCC---CCCC
Confidence 0 000123455678999998543 33 34444443 56789999999999999988874 5544
Q ss_pred CCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhc
Q 013914 139 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 218 (434)
Q Consensus 139 ~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (434)
..++++ ..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.
T Consensus 151 ~~~v~~---~~~~~~~----~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~ 221 (455)
T 2yqu_A 151 YERVVT---STEALSF----P-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQ 221 (455)
T ss_dssp SSSEEC---HHHHTCC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHH
T ss_pred cCcEec---hHHhhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHC
Confidence 345553 3333221 1 14789999999999999999999999999999999998885 7999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--hh-ccccc-cCCcEEeCCCCCCCCCcEEE
Q 013914 219 GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--FK-GQVAE-NKGGIETDDFFKTSADDVYA 294 (434)
Q Consensus 219 GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~--~~-~~~~~-~~g~i~vd~~~~t~~~~iya 294 (434)
||+++++++|++++.+++ ...+.+.+|+++++|.||+|+|++|++++ ++ .++.. .+|+|.||+++||+.|+|||
T Consensus 222 Gv~i~~~~~V~~i~~~~~--~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya 299 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAK--GARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYA 299 (455)
T ss_dssp TCEEECSCCEEEEEEETT--EEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEE
T ss_pred CCEEEECCEEEEEEEeCC--EEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEE
Confidence 999999999999987332 24677778889999999999999999886 33 35655 46889999999999999999
Q ss_pred ecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------CCEEE
Q 013914 295 VGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVL 368 (434)
Q Consensus 295 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~ 368 (434)
+|||+..+ ..+..|..||+.+|.||.+.. ....+..+|++.. .+..+..+|.++ |..+.
T Consensus 300 ~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~--~~~~~a~~G~~~~~a~~~g~~~~ 364 (455)
T 2yqu_A 300 IGDVVRGP----------MLAHKASEEGIAAVEHMVRGF---GHVDYQAIPSVVY--THPEIAAVGYTEEELKAQGIPYK 364 (455)
T ss_dssp CGGGSSSC----------CCHHHHHHHHHHHHHHHHHSC---CCCCGGGCCEEEC--SSSEEEEEECCHHHHHHHTCCEE
T ss_pred EecCCCCc----------cCHHHHHHhHHHHHHHHcCCC---ccCCCCCCCEEEE--cCCceEEEECCHHHHHHcCCCEE
Confidence 99999754 467789999999999999742 1234555675444 445556667653 32233
Q ss_pred EcCCC-----c---ccCCCcEEEEEEe--CCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 369 FGDND-----L---ASATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 369 ~~~~~-----~---~~~~~~~~~~~~~--~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
.+..+ + ......|+|++++ +|+|+|++++|+.+.++ +.++.+|++++|++|+..+..+.++|.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e 439 (455)
T 2yqu_A 365 VGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSE 439 (455)
T ss_dssp EEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHH
T ss_pred EEEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 22111 1 0235678998884 89999999999998885 9999999999999988877666666654
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.5e-46 Score=370.16 Aligned_cols=398 Identities=19% Similarity=0.204 Sum_probs=277.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC------CCCc------cCccccCCC-------------
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY------ERPA------LSKAYLFPE------------- 58 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~------~~~~------~~~~~~~~~------------- 58 (434)
++|||+|||||+||++||..|++.|.+ |+|||+.+..++ ...+ .++.++...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKK---VAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999987 999998432211 1111 111111000
Q ss_pred -CCC--CCCCcccccCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecCCCcc
Q 013914 59 -GTA--RLPGFHVCVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVL 127 (434)
Q Consensus 59 -~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~ 127 (434)
... ....+...... .........++..+++++.+ .+..++.....+...++ .++.||+||||||++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 000 00000000000 00001122345578999887 55555544444555565 47999999999999998
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHH
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 207 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~ 207 (434)
.|+. ++|.+. ..+ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+ +++. +++++
T Consensus 161 ~p~~--i~G~~~-~~~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~~-~d~~~ 227 (488)
T 3dgz_A 161 YPTQ--VKGALE-YGI---TSDDIFWL----K-ESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLRG-FDQQM 227 (488)
T ss_dssp CCSS--CBTHHH-HCB---CHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT-SCHHH
T ss_pred CCCC--CCCccc-ccC---cHHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cccc-CCHHH
Confidence 8761 355321 111 33333222 1 157899999999999999999999999999999864 5554 79999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EEECCEEEEcccCccChhhh---hcccccc--CC
Q 013914 208 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEADIVVVGVGGRPLISLF---KGQVAEN--KG 277 (434)
Q Consensus 208 ~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g~--~~~~D~vi~a~G~~p~~~~~---~~~~~~~--~g 277 (434)
.+.+.+.+++.||++++++.+.++...+++.+ .+.+.+ |+ ++++|.|++|+|++|+++++ ..++..+ +|
T Consensus 228 ~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G 306 (488)
T 3dgz_A 228 SSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQ 306 (488)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCC
Confidence 99999999999999999999999987444433 344433 54 47899999999999999874 3356653 68
Q ss_pred cEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeE
Q 013914 278 GIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQ 357 (434)
Q Consensus 278 ~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 357 (434)
+|.||+++||++|+|||+|||+.... .++..|..||+.||.||++.... ...|..+|+++++.+++ .
T Consensus 307 ~i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~--a 373 (488)
T 3dgz_A 307 KIIVDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSST--LMDYSNVPTTVFTPLEY--G 373 (488)
T ss_dssp CBCCCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSEE--E
T ss_pred eEeECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCc--cCCCCCCCEEEECCCCe--E
Confidence 89999999999999999999985321 46778999999999999976432 25677788877766554 4
Q ss_pred EeecCCC--------CEEEEc--CCCc-c------cCCCcEEEEEEe---CCEEEEEEEecCCHHHH-HHHHHHHHcCCC
Q 013914 358 FYGDNVG--------DTVLFG--DNDL-A------SATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQPS 416 (434)
Q Consensus 358 ~~g~~~~--------~~~~~~--~~~~-~------~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~ 416 (434)
.+|+++. ..+... ...+ . ..+.+|+|++++ +++|||+|++|+++.++ +.++.||++++|
T Consensus 374 ~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t 453 (488)
T 3dgz_A 374 CVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGAS 453 (488)
T ss_dssp EEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCB
T ss_pred EEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCC
Confidence 5576642 111111 1111 0 125789998874 59999999999999885 999999999999
Q ss_pred CCChhhhhccCCCccc
Q 013914 417 VESLDVLKNEGLSFAS 432 (434)
Q Consensus 417 ~~~~~~l~~~~~~~~~ 432 (434)
++||..+.-+.+++++
T Consensus 454 ~~~l~~~~~~hPt~~e 469 (488)
T 3dgz_A 454 YAQVMQTVGIHPTCSE 469 (488)
T ss_dssp HHHHHTSCCCSSCSTH
T ss_pred HHHHhccccCCCChHH
Confidence 9988877666666654
No 49
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7e-45 Score=355.16 Aligned_cols=389 Identities=21% Similarity=0.220 Sum_probs=276.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC---CCCCccCccccCCC---------CC---CCCC----
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP---YERPALSKAYLFPE---------GT---ARLP---- 64 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~---~~~~~~~~~~~~~~---------~~---~~~~---- 64 (434)
.++||+|||||+||++||..|++.|.+ |+|||++...+ ...|.+++.++... .. ..++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIP---TVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCE---EEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 358999999999999999999999886 99999954211 00111122211000 00 0010
Q ss_pred Cccc--ccCC------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCC
Q 013914 65 GFHV--CVGS------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEG 136 (434)
Q Consensus 65 ~~~~--~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g 136 (434)
.+.+ .... ........++++.+++++.++.+. ++ .+++.+.+ .++.||+||+|||++|+.|+. ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~--~~- 153 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--GKQVEVDG-QRIQCEHLLLATGSSSVELPM--LP- 153 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--TTEEEETT-EEEECSEEEECCCEEECCBTT--BC-
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCC--CC-
Confidence 0000 0000 000001245567899999986544 43 56777765 779999999999999987653 33
Q ss_pred CCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHH
Q 013914 137 ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA 216 (434)
Q Consensus 137 ~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~ 216 (434)
.+ ..++ +..++..+. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.++
T Consensus 154 ~~-~~v~---~~~~~~~~~-----~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~ 223 (458)
T 1lvl_A 154 LG-GPVI---SSTEALAPK-----ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLK 223 (458)
T ss_dssp CB-TTEE---CHHHHTCCS-----SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHH
T ss_pred cc-CcEe---cHHHHhhhh-----ccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHH
Confidence 22 1344 344433221 14789999999999999999999999999999999999984 89999999999999
Q ss_pred hcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCccChhhh---hccccc-cCCcEEeCCCCCCCCC
Q 013914 217 NKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSAD 290 (434)
Q Consensus 217 ~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g--~~~~~D~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~ 290 (434)
+.||+++++++|++++. ++ ..+...+| +++++|.|++|+|++|+++++ ..++.. ++ +|.||+++||+.|
T Consensus 224 ~~gv~i~~~~~v~~i~~--~~--v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t~~~ 298 (458)
T 1lvl_A 224 KLGIALHLGHSVEGYEN--GC--LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQTSMH 298 (458)
T ss_dssp HHTCEEETTCEEEEEET--TE--EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBCSST
T ss_pred HCCCEEEECCEEEEEEe--CC--EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcCCCC
Confidence 99999999999999975 22 34444456 689999999999999999853 335555 34 9999999999999
Q ss_pred cEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEeecCC------C
Q 013914 291 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------G 364 (434)
Q Consensus 291 ~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~ 364 (434)
+|||+|||+..+ ..+..|..||+.+|.||.+.. ....+..+|++.. .+..+..+|.++ |
T Consensus 299 ~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~--~~p~~a~vG~~e~~a~~~g 363 (458)
T 1lvl_A 299 NVWAIGDVAGEP----------MLAHRAMAQGEMVAEIIAGKA---RRFEPAAIAAVCF--TDPEVVVVGKTPEQASQQG 363 (458)
T ss_dssp TEEECGGGGCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCSCCCEEEC--SSSEEEEEECCHHHHHHTT
T ss_pred CEEEeeccCCCc----------ccHHHHHHHHHHHHHHhcCCC---ccCCCCCCCEEEE--CCCCeEEEeCCHHHHHHcC
Confidence 999999999854 467789999999999999742 1234556676544 444556667653 3
Q ss_pred CEEEEcCCC-----cc---cCCCcEEEEEE--eCCEEEEEEEecCCHHHH-HHHHHHHHcCCCCCChhhhhccCCCccc
Q 013914 365 DTVLFGDND-----LA---SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 432 (434)
Q Consensus 365 ~~~~~~~~~-----~~---~~~~~~~~~~~--~~~~ilG~~~~g~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 432 (434)
..+..+..+ +. ....+|+|+++ ++++|+|++++|+.+.++ +.++.+|++++|++|+..+..+.++|.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 442 (458)
T 1lvl_A 364 LDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGE 442 (458)
T ss_dssp CCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTH
T ss_pred CCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHH
Confidence 223222111 11 23567899888 579999999999998884 9999999999999988776666666543
No 50
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.3e-44 Score=363.19 Aligned_cols=396 Identities=17% Similarity=0.188 Sum_probs=272.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC------CCCc------cCccccCCC-----------CC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY------ERPA------LSKAYLFPE-----------GT 60 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~------~~~~------~~~~~~~~~-----------~~ 60 (434)
.++||+|||||+||++||.+|++.|.+ |+|||+....+. ...+ .++.+.... ..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~---v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAK---TAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCe---EEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 468999999999999999999999987 999997422111 0000 011000000 00
Q ss_pred CCCCCcccccCCCCCCC---------------ChhhHhhcCcEEEcCCeeEEEECCCCEEEccCC--cEEEcceEEEecC
Q 013914 61 ARLPGFHVCVGSGGERL---------------LPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATG 123 (434)
Q Consensus 61 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG 123 (434)
...+... ... .... ....+...+++++.+ ....++.....+...+| .++.||+||||||
T Consensus 183 ~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtG 258 (598)
T 2x8g_A 183 WSLDRSK--ISH-NWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATG 258 (598)
T ss_dssp CCCCGGG--CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCC
T ss_pred ccccCCc--Ccc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCC
Confidence 0000000 000 0000 011234568999886 55556654444444556 4689999999999
Q ss_pred CCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccC
Q 013914 124 STVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLF 203 (434)
Q Consensus 124 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~ 203 (434)
++|+.|+ ++|.+. ...+ ..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++. .+++. +
T Consensus 259 s~p~~p~---i~G~~~-~~~~---~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~ 324 (598)
T 2x8g_A 259 ERPKYPE---IPGAVE-YGIT---SDDLFSL----P-YFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-F 324 (598)
T ss_dssp EEECCCS---STTHHH-HCEE---HHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-S
T ss_pred CCCCCCC---CCCccc-ceEc---HHHHhhC----c-cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-C
Confidence 9998877 566431 1222 2222111 1 24789999999999999999999999999999988 56665 7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEec-----CC---CcE-EEEEeCCCcEEE--CCEEEEcccCccChhhh---h
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN-----AD---GEV-KEVKLKDGRTLE--ADIVVVGVGGRPLISLF---K 269 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~-----~~---g~v-~~v~~~~g~~~~--~D~vi~a~G~~p~~~~~---~ 269 (434)
++++.+.+.+.+++.||++++++.+.++... .+ +.+ ..+.+.+|++++ +|.|++|+|++||++++ .
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~ 404 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCET 404 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGG
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchh
Confidence 9999999999999999999999988888542 12 332 223456787665 99999999999999864 3
Q ss_pred ccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeE
Q 013914 270 GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFY 348 (434)
Q Consensus 270 ~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~ 348 (434)
.++.. ++|+|.||+++||++|+|||+|||+.... ..+..|..||+.||.||++.... ...|..+|+.+
T Consensus 405 ~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~~~ 473 (598)
T 2x8g_A 405 VGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQAGRYLARRLFAGATE--LTDYSNVATTV 473 (598)
T ss_dssp GCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHHHHHHHHHHHHCCCC--CCCCTTCCEEE
T ss_pred cCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHhHHHHHHHHhcCCCc--ccCCCCCcEEE
Confidence 35666 56889999999999999999999965321 46788999999999999975421 25677788777
Q ss_pred EeccCceeEEeecCC-------CC-EEEEcC--CC---cc----cCCCcEEEEEEe---CCEEEEEEEecCCHHHH-HHH
Q 013914 349 SRAFDLSWQFYGDNV-------GD-TVLFGD--ND---LA----SATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAI 407 (434)
Q Consensus 349 ~~~~~~~~~~~g~~~-------~~-~~~~~~--~~---~~----~~~~~~~~~~~~---~~~ilG~~~~g~~~~~~-~~~ 407 (434)
++.+++.. +|+++ +. .+.... .. .. .....|+|++++ +++|||+|++|+++.++ +.+
T Consensus 474 ~~~~~~a~--vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~ 551 (598)
T 2x8g_A 474 FTPLEYGA--CGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGY 551 (598)
T ss_dssp CSSSCEEE--EECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHH
T ss_pred ECCCceEE--EeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHH
Confidence 66555554 56553 21 111110 10 00 124678888774 79999999999998885 999
Q ss_pred HHHHHcCCCCCChhhhhccCCCcccc
Q 013914 408 AKVARVQPSVESLDVLKNEGLSFASK 433 (434)
Q Consensus 408 ~~~i~~~~~~~~~~~l~~~~~~~~~~ 433 (434)
+.||++++|++|+..+.-+.+++.+.
T Consensus 552 ~~ai~~~~t~~~l~~~~~~hPt~~e~ 577 (598)
T 2x8g_A 552 AVAIKMGATKADFDRTIGIHPTCSET 577 (598)
T ss_dssp HHHHHTTCBHHHHHHSCCCSSCSGGG
T ss_pred HHHHHcCCCHHHHhhccccCCCHHHH
Confidence 99999999999888877777776653
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.6e-41 Score=310.77 Aligned_cols=298 Identities=21% Similarity=0.236 Sum_probs=210.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChh
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 80 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
|+...|||+||||||||++||.+|+++|++ |+|||++... ..++.......+|++....+.........
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~~~g--------G~~~~~~~i~~~p~~~~~~~~~~~~~~~~ 70 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLK---TVMIERGIPG--------GQMANTEEVENFPGFEMITGPDLSTKMFE 70 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTT--------GGGGGCSCBCCSTTCSSBCHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCC--------CeeecccccCCcCCccccchHHHHHHHHH
Confidence 555579999999999999999999999987 9999987421 11222222233343322111111112233
Q ss_pred hHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHh
Q 013914 81 WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKA 160 (434)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~ 160 (434)
...+.+..+..+..+...+.....+...++++++||++|||||++|+.|++++.+......++++...+.. .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~--------~ 142 (312)
T 4gcm_A 71 HAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--------F 142 (312)
T ss_dssp HHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG--------G
T ss_pred HHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCcc--------c
Confidence 44556777777767777777777777778889999999999999999888433322222345443222211 1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc--
Q 013914 161 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE-- 238 (434)
Q Consensus 161 ~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~-- 238 (434)
.++++++|||+|++|+|+|..|.+.|.+||++++.+++++. . ....+.+++.++.......+......+...
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQ---R---ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGS 216 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC---H---HHHHHHHHCTTEEEECSEEEEEEEEETTEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcc---h---hHHHHHHHhcCcceeeecceeeeecccccccc
Confidence 25799999999999999999999999999999999988763 1 122355777888888887776665522111
Q ss_pred EEEEEeC--CCcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccH
Q 013914 239 VKEVKLK--DGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHV 315 (434)
Q Consensus 239 v~~v~~~--~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~ 315 (434)
....... ++..+++|.|++++|.+|+..++.. ++..++|+|.||++||||+|||||+|||++.+. .++
T Consensus 217 ~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~---------~~~ 287 (312)
T 4gcm_A 217 VTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGL---------RQI 287 (312)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSC---------CSH
T ss_pred ceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcc---------hHH
Confidence 1111222 3357899999999999999998865 444578999999999999999999999997432 467
Q ss_pred HHHHHHHHHHHHHHhcc
Q 013914 316 DHARKSAEQAVKTIMAT 332 (434)
Q Consensus 316 ~~A~~~g~~aa~~i~~~ 332 (434)
..|..+|+.||.+|...
T Consensus 288 ~~A~~~G~~AA~~i~~~ 304 (312)
T 4gcm_A 288 VTATGDGSIAAQSAAEY 304 (312)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78999999999999754
No 52
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=3.5e-41 Score=330.90 Aligned_cols=297 Identities=20% Similarity=0.291 Sum_probs=229.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH--
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-- 82 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (434)
+++|||||||+||+++|..|++.+++ |+|||+++++.|. |.+..... ..+..... ........
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~---VtLId~~~~~~~~-PlL~~va~-----G~l~~~~i------~~p~~~~~~~ 106 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYN---VSIISPRSYFLFT-PLLPSAPV-----GTVDEKSI------IEPIVNFALK 106 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCE---EEEEESSSEEECG-GGGGGTTT-----TSSCGGGG------EEEHHHHHTT
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCc---EEEECCCCCcccc-cchhHHhh-----ccccHHHh------hhhHHHHHHh
Confidence 56899999999999999999876654 9999999875543 33211110 00100000 00111222
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEcc--------------------CCcEEEcceEEEecCCCcccccCCCCCCCCCCCe
Q 013914 83 KEKGIELILSTEIVRADIASKTLLSA--------------------TGLIFKYQILVIATGSTVLRLTDFGVEGADAKNI 142 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~--------------------~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v 142 (434)
.+.+++++.+ +++.||++.++|.+. ++.++.||+||||||+.|+.++ +||.. .+.
T Consensus 107 ~~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~---ipG~~-e~a 181 (502)
T 4g6h_A 107 KKGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG---IPGVT-DYG 181 (502)
T ss_dssp CSSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT---CTTHH-HHC
T ss_pred hcCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC---ccCcc-ccc
Confidence 2347899886 899999999988753 3568999999999999998777 57754 456
Q ss_pred EEecCHHHHHHHHHHHHhC---------------CCCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEc
Q 013914 143 FYLREIDDADKLVEAIKAK---------------KNGKAVVVGGGYIGLELSAALKINN--------------IDVSMVY 193 (434)
Q Consensus 143 ~~~~~~~~~~~~~~~l~~~---------------~~~~v~ViG~g~~~~e~a~~l~~~g--------------~~v~lv~ 193 (434)
+.+++..++..+++.+... ...+++|||+|++|+|+|..|.+.+ .+|++++
T Consensus 182 ~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve 261 (502)
T 4g6h_A 182 HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVE 261 (502)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEec
Confidence 7889999998887765321 1247999999999999999987643 6899999
Q ss_pred cCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc----EEECCEEEEcccCccChhh--
Q 013914 194 PEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR----TLEADIVVVGVGGRPLISL-- 267 (434)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~----~~~~D~vi~a~G~~p~~~~-- 267 (434)
+.+++++. +++++.+.+.+.|++.||+++++++|++++. ++........||+ ++++|+||||+|.+|+...
T Consensus 262 ~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~ 338 (502)
T 4g6h_A 262 ALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITD 338 (502)
T ss_dssp SSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHH
T ss_pred cccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHh
Confidence 99999986 8999999999999999999999999999965 5555556667774 6999999999999998532
Q ss_pred -h-hccccc-cCCcEEeCCCCCC-CCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhcc
Q 013914 268 -F-KGQVAE-NKGGIETDDFFKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 268 -~-~~~~~~-~~g~i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
. ..+... .+|+|.||++||+ ++|||||+|||+..+.+ +.++.|.+||+++|+||.+.
T Consensus 339 l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p--------~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 339 LFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLP--------PTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSC--------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCC--------CchHHHHHHHHHHHHHHHHH
Confidence 2 223333 5789999999999 89999999999987655 78889999999999999653
No 53
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-39 Score=306.43 Aligned_cols=303 Identities=17% Similarity=0.205 Sum_probs=222.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCC-CCCCCCcccccCCCCCCCCh
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG-TARLPGFHVCVGSGGERLLP 79 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (434)
||++++||+|||||+||+++|..|++.|++ |+|||+++..... +. ...+.. ....+.+...........+.
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~ 72 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLPEPGGQ--LT---ALYPEKYIYDVAGFPKVYAKDLVKGLV 72 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSCHH--HH---HTCTTSEECCSTTCSSEEHHHHHHHHH
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCe--ee---ccCCCceeeccCCCCCCCHHHHHHHHH
Confidence 777789999999999999999999999886 9999998653210 00 000000 01111111000000011223
Q ss_pred hhHhhcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCC---cccccCCCCCCCC---CCCeEE-ecCHHH
Q 013914 80 EWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGST---VLRLTDFGVEGAD---AKNIFY-LREIDD 150 (434)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~---~~~~~~~~~~g~~---~~~v~~-~~~~~~ 150 (434)
+.+++.+++++.++.|..++.+.. .+.+.++.++.||+||+|||+. |..++ ++|.+ ...+++ +.+..
T Consensus 73 ~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~---i~g~~~~~~~~~~~~~~~~~- 148 (335)
T 2zbw_A 73 EQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIG---APGEREFEGRGVYYAVKSKA- 148 (335)
T ss_dssp HHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCC---CTTTTTTBTTTEESSCSCGG-
T ss_pred HHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCC---CCChhhccCcEEEEecCchh-
Confidence 445567899988889999887654 3566677789999999999995 55444 45542 123432 12211
Q ss_pred HHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 151 ~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ .++..+.+.+.+++.||++++++.+.+
T Consensus 149 ---------~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~ 216 (335)
T 2zbw_A 149 ---------EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRR 216 (335)
T ss_dssp ---------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEE
T ss_pred ---------hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCccee
Confidence 12578999999999999999999999999999999988765 467788888999999999999999999
Q ss_pred EEecCCCcEEEEEeC---CC--cEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEeccccccccc
Q 013914 231 FTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMK 304 (434)
Q Consensus 231 i~~~~~g~v~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~ 304 (434)
+.. ++.+..+.+. +| +++++|.|++|+|++|+.++++. ++..++|+|.||+++||++|+|||+|||+..+..
T Consensus 217 i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~ 294 (335)
T 2zbw_A 217 VEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK 294 (335)
T ss_dssp EEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC
T ss_pred Ecc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc
Confidence 987 4555566665 67 57999999999999999887754 5555678999999999999999999999986431
Q ss_pred ccCcceecccHHHHHHHHHHHHHHHhccCCCC
Q 013914 305 LYREMRRVEHVDHARKSAEQAVKTIMATEGGK 336 (434)
Q Consensus 305 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 336 (434)
...+..|..+|+.+|+||.+...+.
T Consensus 295 -------~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 295 -------LPLIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred -------hhhhhhhHHHHHHHHHHHHHHhhhh
Confidence 1678889999999999998876543
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=7.4e-40 Score=304.81 Aligned_cols=297 Identities=20% Similarity=0.212 Sum_probs=207.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC--CCCccCccccCCCCCCCCCCcccccC-CCCCCCC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY--ERPALSKAYLFPEGTARLPGFHVCVG-SGGERLL 78 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 78 (434)
|+++|||+||||||||++||.+|+++|++ |+|||++..... ..+..++.. ..+++++..... .......
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~---v~liE~~~~gg~~~~G~~~~~~~-----i~~~~g~~~~i~~~~l~~~~ 72 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGFMAGGVAAGGQLTTTTI-----IENFPGFPNGIDGNELMMNM 72 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSGGGCCTTCGGGGSSE-----ECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCcccCCCcCChHH-----hhhccCCcccCCHHHHHHHH
Confidence 45679999999999999999999999987 999999754211 111111111 122333221100 0011223
Q ss_pred hhhHhhcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccccCCCCCCCCC---CCeEEecCHHHHHH
Q 013914 79 PEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADK 153 (434)
Q Consensus 79 ~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~ 153 (434)
...+++.++.+... .+.......+ .+.+.++.++.||++|||||++|+.|+ +||.+. ..+....... .
T Consensus 73 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~---ipG~~~~~~~~~~~~~~~~---~ 145 (314)
T 4a5l_A 73 RTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMH---VPGEDKYWQNGVSACAICD---G 145 (314)
T ss_dssp HHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCC---CTTHHHHBTTTEESCHHHH---T
T ss_pred HHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccC---CCccccccccceeeehhhh---h
Confidence 34455678888775 5555554443 456677789999999999999998887 465432 2232222111 1
Q ss_pred HHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013914 154 LVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 154 ~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~ 233 (434)
......+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ... ...+.....+++.+....+.++..
T Consensus 146 ---~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~i~~ 216 (314)
T 4a5l_A 146 ---AVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIEVIWNSELVELEG 216 (314)
T ss_dssp ---TSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEE
T ss_pred ---hhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhcccceeeEeeeeeEEEEe
Confidence 11112578999999999999999999999999999998776543 332 234456677889999988888876
Q ss_pred cCCCcEEEEEe-----CCCcEEECCEEEEcccCccChhhhhccccccCCcEEeCCCCCCCCCcEEEecccccccccccCc
Q 013914 234 NADGEVKEVKL-----KDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 234 ~~~g~v~~v~~-----~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~ 308 (434)
. +.....+.+ .+++++++|.|++++|++||++++...+...++++.||+++|||+|||||+|||++.+.
T Consensus 217 ~-~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~----- 290 (314)
T 4a5l_A 217 D-GDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGPKTSVDGVFACGDVCDRVY----- 290 (314)
T ss_dssp S-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCBTTBCSSTTEEECSTTTCSSC-----
T ss_pred e-eeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeEeCCCCccCCCCEEEEEeccCCcc-----
Confidence 3 333333333 34568999999999999999999987776644555699999999999999999998654
Q ss_pred ceecccHHHHHHHHHHHHHHHhcc
Q 013914 309 MRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
.++..|..+|+.||.++...
T Consensus 291 ----~~~~~A~~~G~~AA~~~~~y 310 (314)
T 4a5l_A 291 ----RQAIVAAGSGCMAALSCEKW 310 (314)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHHHHH
Confidence 35677888999999988653
No 55
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=2.9e-39 Score=301.60 Aligned_cols=299 Identities=19% Similarity=0.200 Sum_probs=223.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccC-CCCCCCCh
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLP 79 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 79 (434)
|||+++||+|||||+||+++|..|++.|++ |+|||+..... .+.........+.+..... ........
T Consensus 1 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQ---PVLITGMEKGG--------QLTTTTEVENWPGDPNDLTGPLLMERMH 69 (320)
T ss_dssp CCEEEEEEEEECCSHHHHHHHHHHHTTTCC---CEEECCSSTTG--------GGGGCSBCCCSTTCCSSCBHHHHHHHHH
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEccCCCCc--------eEecchhhhhCCCCCCCCCHHHHHHHHH
Confidence 456679999999999999999999999887 99999753211 0111111112222210000 00011233
Q ss_pred hhHhhcCcEEEcCCeeEEEECCCCEEE-ccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHHH
Q 013914 80 EWYKEKGIELILSTEIVRADIASKTLL-SATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLV 155 (434)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~~v~-~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~ 155 (434)
..+.+.+++++.+ .+..++.+.+.+. +.++.++.||+||+|||+.|..|+ +++.+ ...++++....+.
T Consensus 70 ~~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~---~~g~~~~~~~~~~~~~~~~~~---- 141 (320)
T 1trb_A 70 EHATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLG---LPSEEAFKGRGVSACATSDGF---- 141 (320)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCC---CHHHHHTBTTTEESCHHHHGG----
T ss_pred HHHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCC---CCChHHhCCceeEecccCCcc----
Confidence 4556679999998 4899988766544 566778999999999999887776 44432 2345443332221
Q ss_pred HHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013914 156 EAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 156 ~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~ 235 (434)
+ ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ++.+.+.+.+.+++.||++++++++.++.. +
T Consensus 142 --~--~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~ 213 (320)
T 1trb_A 142 --F--YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIKRLMDKVENGNIILHTNRTLEEVTG-D 213 (320)
T ss_dssp --G--GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC---CHHHHHHHHHHHHTSSEEEECSCEEEEEEE-C
T ss_pred --c--cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc---CHHHHHHHHHhcccCCeEEEcCceeEEEEc-C
Confidence 1 2578999999999999999999999999999999887653 678888888999999999999999999987 3
Q ss_pred CCcEEEEEeCC----C--cEEECCEEEEcccCccChhhhhccccccCCcEEeCCCC-----CCCCCcEEEeccccccccc
Q 013914 236 DGEVKEVKLKD----G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFF-----KTSADDVYAVGDVATFPMK 304 (434)
Q Consensus 236 ~g~v~~v~~~~----g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~-----~t~~~~iya~GD~~~~~~~ 304 (434)
++.+..+.+.+ | +++++|.|++|+|++|++++++.++..++|+|.||+++ +|++|+|||+|||+..+.
T Consensus 214 ~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~- 292 (320)
T 1trb_A 214 QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIY- 292 (320)
T ss_dssp SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSS-
T ss_pred CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCceEEECCCcccccccCCCCCEEEcccccCCcc-
Confidence 44666677654 4 57999999999999999998876665567899999997 889999999999998642
Q ss_pred ccCcceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 305 LYREMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 305 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..+..|..+|+.||.+|...+.+
T Consensus 293 --------~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 293 --------RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred --------hhhhhhhccHHHHHHHHHHHHHh
Confidence 46788999999999999876644
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.6e-38 Score=301.49 Aligned_cols=304 Identities=21% Similarity=0.296 Sum_probs=220.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCC-CCCCCCCcccccCCCCCCCChhh
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPE-GTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
++++||+|||||++|+++|..|++.|++ |+|||+++..... + . .+.+. .....+.+...........+.+.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gg~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 83 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMPQLGGQ--L--A-ALYPEKHIYDVAGFPEVPAIDLVESLWAQ 83 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHH--H--H-HTCTTSEECCSTTCSSEEHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCc--c--c-ccCCCcccccCCCCCCCCHHHHHHHHHHH
Confidence 4468999999999999999999999887 9999998653210 0 0 00000 00111111100000001122344
Q ss_pred HhhcCcEEEcCCeeEEEECCCC---EEEccCCcEEEcceEEEecCCCcccccCCCCCC-CC---CCCeEEe-cCHHHHHH
Q 013914 82 YKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVLRLTDFGVEG-AD---AKNIFYL-REIDDADK 153 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g-~~---~~~v~~~-~~~~~~~~ 153 (434)
+++.+++++.++.|+.++...+ .+.+.++.++.||+||+|||+.+..|..++++| .+ ...+++. .+..
T Consensus 84 ~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~---- 159 (360)
T 3ab1_A 84 AERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE---- 159 (360)
T ss_dssp HHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG----
T ss_pred HHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH----
Confidence 5567899999889999987654 577777878999999999999433332222455 22 2234322 2221
Q ss_pred HHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013914 154 LVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 154 ~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~ 233 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.+. +...+.+.+.+++.||++++++++.++..
T Consensus 160 ------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~ 230 (360)
T 3ab1_A 160 ------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH---GKTAHEVERARANGTIDVYLETEVASIEE 230 (360)
T ss_dssp ------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC---SHHHHSSHHHHHHTSEEEESSEEEEEEEE
T ss_pred ------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC---HHHHHHHHHHhhcCceEEEcCcCHHHhcc
Confidence 125789999999999999999999999999999999887652 45667788888999999999999999987
Q ss_pred cCCCcEEEEEeC--CC--cEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccccccCc
Q 013914 234 NADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 234 ~~~g~v~~v~~~--~g--~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~ 308 (434)
+++++..+.+. +| +++++|.||+|+|++|+.++++. ++..++|+|.||+++||++|+|||+|||+..+..
T Consensus 231 -~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~---- 305 (360)
T 3ab1_A 231 -SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK---- 305 (360)
T ss_dssp -ETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC----
T ss_pred -CCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc----
Confidence 34555566664 77 57999999999999999987754 4555679999999999999999999999986431
Q ss_pred ceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 309 MRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..++..|..||+.||++|.+...+
T Consensus 306 ---~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 306 ---LKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred ---cceeehhHHHHHHHHHHHHhhcCC
Confidence 167888999999999999877644
No 57
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=4e-38 Score=294.52 Aligned_cols=292 Identities=21% Similarity=0.257 Sum_probs=213.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCccccc-CCCCCCCChhhH
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (434)
+++||+|||||+||+++|..|++.|++ |+|||++.... . +.........+++.... .......+.+.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg---~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKGMPGG---Q-----IAWSEEVENFPGFPEPIAGMELAQRMHQQA 75 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTG---G-----GGGCSCBCCSTTCSSCBCHHHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCCCCCc---c-----cccccccccCCCCCCCCCHHHHHHHHHHHH
Confidence 368999999999999999999999887 99999983211 0 00000111112211000 000011234455
Q ss_pred hhcCcEEEcCCeeEEEECC--CC---EEEccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHH
Q 013914 83 KEKGIELILSTEIVRADIA--SK---TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKL 154 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~--~~---~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~ 154 (434)
++.+++++.+ .+..++.+ .+ .+.+.++.++.||++|+|||+.|+.|+ +++.+ ...++++......
T Consensus 76 ~~~gv~~~~~-~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~---i~g~~~~~~~~~~~~~~~~~~--- 148 (325)
T 2q7v_A 76 EKFGAKVEMD-EVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLG---IPGEDNFWGKGVSTCATCDGF--- 148 (325)
T ss_dssp HHTTCEEEEC-CEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCC---CTTTTTTBTTTEESCHHHHGG---
T ss_pred HHcCCEEEee-eEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCC---CCChhhccCceEEEeccCCHH---
Confidence 6779999884 89988876 43 566777888999999999999988776 45543 2344433322211
Q ss_pred HHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEec
Q 013914 155 VEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN 234 (434)
Q Consensus 155 ~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~ 234 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ++.+. .+.+++.||+++++++++++..
T Consensus 149 -----~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~---~~l~~~~gv~i~~~~~v~~i~~- 216 (325)
T 2q7v_A 149 -----FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVAQ---ARAFANPKMKFIWDTAVEEIQG- 216 (325)
T ss_dssp -----GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHHH---HHHHTCTTEEEECSEEEEEEEE-
T ss_pred -----HcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHHH---HHHHhcCCceEecCCceEEEcc-
Confidence 11578999999999999999999999999999999887643 44332 2333456999999999999987
Q ss_pred CCCcEEEEEeC---CCc--EEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCc
Q 013914 235 ADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 235 ~~g~v~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~ 308 (434)
++.+..+.+. +|+ ++++|.|++|+|++|++++++..+.. ++|+|.||+++||++|+|||+|||+..+.
T Consensus 217 -~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----- 290 (325)
T 2q7v_A 217 -ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY----- 290 (325)
T ss_dssp -SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC-----
T ss_pred -CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCccEecCCCCccCCCCEEEeecccCccH-----
Confidence 4555566664 675 78999999999999999888655544 57899999999999999999999998632
Q ss_pred ceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 309 MRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..+..|..||+.||.||.....+
T Consensus 291 ----~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 291 ----RQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999876543
No 58
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.4e-38 Score=294.18 Aligned_cols=291 Identities=23% Similarity=0.259 Sum_probs=212.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||+++|..|++.|++ |+|||+...... +........++++...........+.+.++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFS---VAILDKAVAGGL--------TAEAPLVENYLGFKSIVGSELAKLFADHAA 83 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTGG--------GGGCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCcc--------ccccchhhhcCCCcccCHHHHHHHHHHHHH
Confidence 458999999999999999999999987 999999532110 000001111222100000000112334455
Q ss_pred hcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHHHHHH
Q 013914 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~l 158 (434)
+.+++++. ..+..++.+.+ .+.+ ++.++.||++|+|||+.|+.|+ +++.+ ...++........
T Consensus 84 ~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~---i~g~~~~~~~~~~~~~~~~~~------- 151 (319)
T 3cty_A 84 NYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLG---VKGESEYFGKGTSYCSTCDGY------- 151 (319)
T ss_dssp TTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCC---CBTTTTTBTTTEESCHHHHGG-------
T ss_pred HcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCC---CCChHHhCCceEEEEEecchh-------
Confidence 67899988 58999887666 4544 5568999999999999888776 45543 2345433322211
Q ss_pred HhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013914 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 159 ~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~ 238 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. ++. +.+.+++.||++++++++.++.. ++++
T Consensus 152 -~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~~~l~~~gv~i~~~~~v~~i~~-~~~~ 222 (319)
T 3cty_A 152 -LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YVQEIKKRNIPYIMNAQVTEIVG-DGKK 222 (319)
T ss_dssp -GGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HHHHHHHTTCCEECSEEEEEEEE-SSSS
T ss_pred -hcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HHHHHhcCCcEEEcCCeEEEEec-CCce
Confidence 11578999999999999999999999999999999877643 343 44556689999999999999987 3444
Q ss_pred EEEEEeC---CCc--EEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCccee
Q 013914 239 VKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 311 (434)
Q Consensus 239 v~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~ 311 (434)
+..+.+. +|+ ++++|.||+|+|++|++++++. ++.. ++|+|.||+++||++|+|||+|||+..+.
T Consensus 223 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------- 294 (319)
T 3cty_A 223 VTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF-------- 294 (319)
T ss_dssp EEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC--------
T ss_pred EEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch--------
Confidence 5566664 675 6899999999999999988764 4655 56899999999999999999999998632
Q ss_pred cccHHHHHHHHHHHHHHHhccCCC
Q 013914 312 VEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 312 ~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
..+..|..||+.||.+|.....+
T Consensus 295 -~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 295 -AQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred -hhHHHHHHHHHHHHHHHHHHhhc
Confidence 56888999999999999876543
No 59
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.9e-38 Score=293.47 Aligned_cols=293 Identities=20% Similarity=0.240 Sum_probs=212.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||+++|..|++.|.+ |+|||+.....+ ........++.............+.+.+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~~gG~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIR---TGLMGERFGGQI---------LDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSTTGGG---------GGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCcee---------ccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999887 999986421000 000000011110000000001123345566
Q ss_pred cCcEEEcCCeeEEEECC-----CCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHH
Q 013914 85 KGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~ 159 (434)
.+++++.++++..++++ ...+.+.++.++.||++|+|||+.|..|+.++.+......++++.... ..
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~------~~-- 140 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCD------GP-- 140 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHH------GG--
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCc------Hh--
Confidence 79999999899999875 235777778789999999999999877764332222223454332111 11
Q ss_pred hCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCc
Q 013914 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGE 238 (434)
Q Consensus 160 ~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g~ 238 (434)
...+++++|||+|++|+|+|..|.+.+.+|+++++.+.+. +++ .+.+.+++ .||+++++++++++.. ++++
T Consensus 141 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~~~~v~~i~~-~~~~ 212 (310)
T 1fl2_A 141 LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIILNAQTTEVKG-DGSK 212 (310)
T ss_dssp GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEESSEEEEEEEE-SSSS
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEecCCceEEEEc-CCCc
Confidence 1257899999999999999999999999999999988763 343 34455666 6999999999999987 3456
Q ss_pred EEEEEeCC---Cc--EEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceec
Q 013914 239 VKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 239 v~~v~~~~---g~--~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~ 312 (434)
+..+++.+ |+ ++++|.|++|+|++||++++...+.. ++|+|.||+++||++|+|||+|||+..+.
T Consensus 213 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 283 (310)
T 1fl2_A 213 VVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPY--------- 283 (310)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSS---------
T ss_pred EEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCCcEEcCCCCccCCCCEEEeecccCCcc---------
Confidence 65666643 53 68999999999999999888655555 57899999999999999999999998653
Q ss_pred ccHHHHHHHHHHHHHHHhccCC
Q 013914 313 EHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.||.+|.....
T Consensus 284 ~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 284 KQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhHHHHHHHHHHHHH
Confidence 4677899999999999987543
No 60
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=3.6e-38 Score=294.46 Aligned_cols=290 Identities=20% Similarity=0.222 Sum_probs=214.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||+++|..|++.|++ |+|||++ .... +........++.+...........+.+.+++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~-~gg~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK---TLVIGET-PGGQ--------LTEAGIVDDYLGLIEIQASDMIKVFNKHIEK 82 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS-TTGG--------GGGCCEECCSTTSTTEEHHHHHHHHHHHHHT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc---EEEEecc-CCCe--------ecccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999887 9999998 2110 1111111122222110000011223455566
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccccCCCCCCCCC---CCeEEecCHHHHHHHHHHHH
Q 013914 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~l~ 159 (434)
.+++++. ..|..++.+.+ .+.+.++.++.||+||+|||+.|+.|+ ++|.+. ..+++... .+. .
T Consensus 83 ~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~---i~g~~~~~~~~~~~~~~-~~~-------~ 150 (323)
T 3f8d_A 83 YEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLG---VPGEQEFAGRGISYCSV-ADA-------P 150 (323)
T ss_dssp TTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCC---CTTTTTTBTTTEESCHH-HHG-------G
T ss_pred cCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCC---CCchhhhcCCceEEecc-CCH-------h
Confidence 7899999 79999987754 466677788999999999999988777 455432 45543221 111 1
Q ss_pred hCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcE
Q 013914 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEV 239 (434)
Q Consensus 160 ~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v 239 (434)
...+++++|+|+|++++|+|..|.+.|.+|+++++.+.+++ ++. .+.+.+++.||+++++++++++.. ++.+
T Consensus 151 ~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~--~~~~ 222 (323)
T 3f8d_A 151 LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVLNSVVKEIKG--DKVV 222 (323)
T ss_dssp GGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEE--SSSE
T ss_pred HcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEeCCEEEEEec--cCce
Confidence 12578999999999999999999999999999999988776 333 233444456999999999999987 4566
Q ss_pred EEEEeCC---Cc--EEECCEEEEcccCccChhhhhc-cccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCcceec
Q 013914 240 KEVKLKD---GR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 240 ~~v~~~~---g~--~~~~D~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~ 312 (434)
..+.+.+ |+ ++++|.|++|+|++|++++++. ++.. ++|+|.||+++||++|+|||+|||+..+. ..
T Consensus 223 ~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------~~ 295 (323)
T 3f8d_A 223 KQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL-------GF 295 (323)
T ss_dssp EEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT-------TC
T ss_pred eEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC-------cc
Confidence 6677765 76 7999999999999999888754 5665 67999999999999999999999998631 11
Q ss_pred ccHHHHHHHHHHHHHHHhccC
Q 013914 313 EHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+..|..+|+.||.+|....
T Consensus 296 ~~~~~A~~~g~~aa~~i~~~l 316 (323)
T 3f8d_A 296 RQVITAVAQGAVAATSAYRYV 316 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred cceeehhhHHHHHHHHHHHHH
Confidence 678899999999999997654
No 61
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=6.7e-38 Score=291.64 Aligned_cols=290 Identities=19% Similarity=0.162 Sum_probs=211.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEE-EeCCCCCCCCCCccCccccCCCCCCCCCCccccc-CCCCCCCChh
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPE 80 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~v-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 80 (434)
++++||+|||||+||+++|..|++.|++ |+| +|++.... .+........+|++.... .......+.+
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~~~gG--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKGMPGG--------QITSSSEIENYPGVAQVMDGISFMAPWSE 70 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSSSTTG--------GGGGCSCBCCSTTCCSCBCHHHHHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCCCCCc--------eeeeeceeccCCCCCCCCCHHHHHHHHHH
Confidence 3568999999999999999999999987 888 99953211 011111112222221000 0001122344
Q ss_pred hHhhcCcEEEcCCeeEEEECCC--CEEE--c-cCCcEEEcceEEEecCCCcccccCCCCCCCCC---CCeEEecCHHHHH
Q 013914 81 WYKEKGIELILSTEIVRADIAS--KTLL--S-ATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDAD 152 (434)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~--~~v~--~-~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~ 152 (434)
.+++.+++++.+ .+..+ .+. +.+. + .++ ++.||++|+|||+.|+.|+. +|.+. ..+++.......
T Consensus 71 ~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~---~g~~~~~~~~~~~~~~~~~~- 143 (315)
T 3r9u_A 71 QCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGF---KGEDEFFGKGVSTCATCDGF- 143 (315)
T ss_dssp HHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCC---BTTTTTBTTTEESCHHHHGG-
T ss_pred HHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCC---CChhhcCCCeEEeeeccccc-
Confidence 556679999998 88888 444 3333 3 344 89999999999999887774 55432 445543322211
Q ss_pred HHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 153 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 153 ~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
...+++++|+|+|++++|+|..|.+.+.+|+++++.+.+.. ++++ +.+.+++.||++++++++.++.
T Consensus 144 -------~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~~---~~~~~~~~gv~~~~~~~v~~i~ 210 (315)
T 3r9u_A 144 -------FYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APST---VEKVKKNEKIELITSASVDEVY 210 (315)
T ss_dssp -------GGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHHH---HHHHHHCTTEEEECSCEEEEEE
T ss_pred -------ccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHHH---HHHHHhcCCeEEEeCcEEEEEE
Confidence 11578999999999999999999999999999999887743 4433 3455678999999999999998
Q ss_pred ecCCCcEEEEEeC--CCc--EEECCEEEEcccCccChhhhhc-----cccc-cCCcEEeCCCCCCCCCcEEEeccccccc
Q 013914 233 TNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPLISLFKG-----QVAE-NKGGIETDDFFKTSADDVYAVGDVATFP 302 (434)
Q Consensus 233 ~~~~g~v~~v~~~--~g~--~~~~D~vi~a~G~~p~~~~~~~-----~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~ 302 (434)
. +++++..+.+. +|+ ++++|.|++|+|++|+.++++. ++.. .+|+|.||+++||++|+|||+|||+...
T Consensus 211 ~-~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~ 289 (315)
T 3r9u_A 211 G-DKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDA 289 (315)
T ss_dssp E-ETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTC
T ss_pred c-CCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCc
Confidence 7 34455566665 785 7899999999999999998876 4666 5689999999999999999999998643
Q ss_pred ccccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 303 MKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 303 ~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
. +.+..|..+|+.||.+|....
T Consensus 290 ~---------~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 290 P---------KQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp C---------CCHHHHHHHHHHHHHHHHHHH
T ss_pred h---------hhhhhHHhhHHHHHHHHHHHH
Confidence 2 678899999999999997653
No 62
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1.3e-38 Score=306.45 Aligned_cols=318 Identities=19% Similarity=0.180 Sum_probs=236.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
++|||||||+||+++|.+|++.+. ..+|+|||+++.+.+. |. +......... .. ......+.+.+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p~-~~~v~~g~~~--~~---------~~~~~~~~~~~~ 68 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTC-YM-SNEVIGGDRE--LA---------SLRVGYDGLRAH 68 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECS-TT-HHHHHHTSSC--GG---------GGEECSHHHHHT
T ss_pred CEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCc-cC-HHHHhcCCCC--HH---------HHhhCHHHHHHC
Confidence 689999999999999999999874 4679999998753321 22 2111111100 00 011233456678
Q ss_pred CcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCC-CCCCeEEecCHHHHHHHHHHHHhCCCC
Q 013914 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA-DAKNIFYLREIDDADKLVEAIKAKKNG 164 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~l~~~~~~ 164 (434)
|++++.+ +|+.||++.+++.+.++.++.||+||+|||++++.+++++++.. ....++.+++.+++..+++.+......
T Consensus 69 gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (401)
T 3vrd_B 69 GIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDG 147 (401)
T ss_dssp TCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTT
T ss_pred CCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccC
Confidence 9999997 89999999999999999999999999999999988875333221 123456677888899998888876555
Q ss_pred cEEEECCCH-----------HHHHHHHHHHhCC--CeEEEEccCCccCC-ccCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 165 KAVVVGGGY-----------IGLELSAALKINN--IDVSMVYPEPWCMP-RLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 165 ~v~ViG~g~-----------~~~e~a~~l~~~g--~~v~lv~~~~~~~~-~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
..+|++.+. .+++++..+.+.+ .+|++++..+.+.. ..+++.+.+.+.+.+++.||++++++++..
T Consensus 148 ~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~ 227 (401)
T 3vrd_B 148 GVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAV 227 (401)
T ss_dssp CEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCE
T ss_pred CcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEE
Confidence 555554332 3456666666655 78999998877643 124566677777778899999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhccccccCCcEEeCCC-CC-CCCCcEEEecccccc-cccccC
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF-FK-TSADDVYAVGDVATF-PMKLYR 307 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~-~~-t~~~~iya~GD~~~~-~~~~~~ 307 (434)
++.+.++ ..+++.+|+++++|++++++|.+|+..+.+.++..++|+|.||++ +| |++|||||+|||+.. +.+
T Consensus 228 v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~p--- 302 (401)
T 3vrd_B 228 VKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMP--- 302 (401)
T ss_dssp EEEETTT--TEEEETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSC---
T ss_pred EEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCC---
Confidence 9874444 468899999999999999999999866656677668899999987 66 699999999999864 323
Q ss_pred cceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeE
Q 013914 308 EMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFY 348 (434)
Q Consensus 308 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~ 348 (434)
++...|.+||+++|+||++...|+++.++.+..+++
T Consensus 303 -----k~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~ 338 (401)
T 3vrd_B 303 -----KSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCY 338 (401)
T ss_dssp -----BSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEE
T ss_pred -----chHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEE
Confidence 678889999999999999887776555555544443
No 63
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=4.8e-38 Score=292.16 Aligned_cols=288 Identities=19% Similarity=0.196 Sum_probs=211.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccC-CCCCCCChhhHh
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 83 (434)
+||+|||||++|+++|..|++.|. + |+|||++..... +........++++..... ......+.+.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~---v~lie~~~~gg~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 70 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKN---AVLFEKGMPGGQ--------ITGSSEIENYPGVKEVVSGLDFMQPWQEQCF 70 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSS---EEEECSSSTTCG--------GGGCSCBCCSTTCCSCBCHHHHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCc---EEEEcCCCCCcc--------cccccccccCCCCcccCCHHHHHHHHHHHHH
Confidence 799999999999999999999988 6 999999632111 000011111222110000 000112234455
Q ss_pred hcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHHHHHH
Q 013914 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~l 158 (434)
+.+++++. ..+..++.+.+ .+.+.++.++.||++|+|||+.|+.|+ ++|.+ ...++++...+..
T Consensus 71 ~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~---~~g~~~~~~~~~~~~~~~~~~------- 139 (311)
T 2q0l_A 71 RFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTG---IKGESEYWGKGVSTCATCDGF------- 139 (311)
T ss_dssp TTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCC---CBTHHHHBTTTEESCHHHHGG-------
T ss_pred HcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCC---CCChhhccCCcEEEeecCChh-------
Confidence 67899988 68999987766 566677788999999999999988777 45532 2445544332221
Q ss_pred HhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHH-hcCcEEEcCCeEEEEEecCCC
Q 013914 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA-NKGIKIIKGTVAVGFTTNADG 237 (434)
Q Consensus 159 ~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~-~~GV~~~~~~~v~~i~~~~~g 237 (434)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .++.+ .+.+. +.||+++++++++++..+ ++
T Consensus 140 -~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~----~~~l~~~~gv~v~~~~~v~~i~~~-~~ 210 (311)
T 2q0l_A 140 -FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPIT----LEHAKNNDKIEFLTPYVVEEIKGD-AS 210 (311)
T ss_dssp -GGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHHH----HHHHHTCTTEEEETTEEEEEEEEE-TT
T ss_pred -hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHHH----HHHHhhCCCeEEEeCCEEEEEECC-CC
Confidence 1157899999999999999999999999999999988763 34443 33344 579999999999999873 34
Q ss_pred cEEEEEeC---CCc--EEECCEEEEcccCccChhhhhcc-----ccc-cCCcEEeCCCCCCCCCcEEEeccccccccccc
Q 013914 238 EVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQ-----VAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLY 306 (434)
Q Consensus 238 ~v~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~~-----~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~ 306 (434)
.+..+.+. +|+ ++++|.|++|+|++|++++++.. +.. ++|+|.||+++||++|+|||+|||+..+.
T Consensus 211 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--- 287 (311)
T 2q0l_A 211 GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP--- 287 (311)
T ss_dssp EEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---
T ss_pred cEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch---
Confidence 44456665 675 78999999999999999888653 555 57899999999999999999999998632
Q ss_pred CcceecccHHHHHHHHHHHHHHHhccC
Q 013914 307 REMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 307 ~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+..|..||+.||.||....
T Consensus 288 ------~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 288 ------KQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHhHHHHHHHHHHHH
Confidence 578889999999999997643
No 64
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.3e-38 Score=298.67 Aligned_cols=299 Identities=18% Similarity=0.224 Sum_probs=217.7
Q ss_pred CCC--CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCC
Q 013914 1 MAE--KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLL 78 (434)
Q Consensus 1 M~~--~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (434)
||+ +++||+|||||+||+++|..|++.|++ |+|||+++..... + ............+++...........+
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~gG~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQAS---VKIIESLPQLGGQ--L--SALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHH--H--HHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCCCce--e--hhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 553 358999999999999999999999886 9999998653200 0 000000001112222110000011223
Q ss_pred hhhHhhcCcEEEcCCeeEEEECCCC---EEEccCCcEEEcceEEEecCC---CcccccCCCCCCCCC---CCeEEecCHH
Q 013914 79 PEWYKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGS---TVLRLTDFGVEGADA---KNIFYLREID 149 (434)
Q Consensus 79 ~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~---~~~~~~~~~~~g~~~---~~v~~~~~~~ 149 (434)
.+.+++.+++++.++.|+.++...+ .+.+.+++ +.||+||+|||+ .|+.|+ ++|.+. ..+++ .+.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~---~~g~~~~~g~~~~~--~~~ 147 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLE---LENAEQYEGKNLHY--FVD 147 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCC---CTTGGGGBTTTEES--SCS
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCC---CCChhhccCceEEE--ecC
Confidence 4445567899999899999998876 67777665 999999999999 777666 455432 33432 222
Q ss_pred HHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEE
Q 013914 150 DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 150 ~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~ 229 (434)
+... ..+++++|+|+|.+++|+|..|.+.+.+|+++++.+.+.+ .+.. .+.+++.||++++++++.
T Consensus 148 ~~~~-------~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~~-----~~~l~~~gv~~~~~~~v~ 213 (332)
T 3lzw_A 148 DLQK-------FAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEHS-----VENLHASKVNVLTPFVPA 213 (332)
T ss_dssp CGGG-------GBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHHH-----HHHHHHSSCEEETTEEEE
T ss_pred CHHH-------cCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHHH-----HHHHhcCCeEEEeCceee
Confidence 2222 1578999999999999999999999999999999988754 2222 244788999999999999
Q ss_pred EEEecCCCcEEEEEeCC-----CcEEECCEEEEcccCccChhhhhc-cccccCCcEEeCCCCCCCCCcEEEecccccccc
Q 013914 230 GFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPM 303 (434)
Q Consensus 230 ~i~~~~~g~v~~v~~~~-----g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~ 303 (434)
++..+++ ...+.+.+ ++++++|.|++|+|++|+.++++. ++..++|+|.||+++||++|+|||+|||+..+.
T Consensus 214 ~i~~~~~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~ 291 (332)
T 3lzw_A 214 ELIGEDK--IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEG 291 (332)
T ss_dssp EEECSSS--CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTT
T ss_pred EEecCCc--eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCC
Confidence 9987322 34566654 357999999999999999988754 566678999999999999999999999997542
Q ss_pred cccCcceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 304 KLYREMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 304 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
. +..+..|..+|+.||.+|.....+
T Consensus 292 ~-------~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 292 K-------VNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp C-------CCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred C-------cceEeeehhhHHHHHHHHHHhhCh
Confidence 1 167889999999999999887654
No 65
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2e-38 Score=298.25 Aligned_cols=299 Identities=21% Similarity=0.222 Sum_probs=217.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCccccc-CCCCCCCChhhH
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (434)
+++||+|||||++|+++|..|+++|++ |+|||+.+.... .+...+........++++.... .......+.+.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~~~~~~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGMMANGI---AAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQS 94 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTB---CTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCCCC---CcCcccccchhhcccCCCcccCCHHHHHHHHHHHH
Confidence 468999999999999999999999987 999999652111 1111111111112222221100 000112334556
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEc-----cCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHH
Q 013914 83 KEKGIELILSTEIVRADIASKTLLS-----ATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKL 154 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~-----~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~ 154 (434)
++.+++++.++ +..++.+.+.+.+ .++.++.||++|+|||+.|+.|+ ++|.+ ...+++......
T Consensus 95 ~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~---~~g~~~~~~~~~~~~~~~~~---- 166 (338)
T 3itj_A 95 TKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMH---LPGEETYWQKGISACAVCDG---- 166 (338)
T ss_dssp HHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCC---CTTHHHHBTTTEESCHHHHT----
T ss_pred HHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCC---CCCchhccCccEEEchhccc----
Confidence 67899999986 9999988776554 35678999999999999988776 45532 234443322111
Q ss_pred HHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHh-cCcEEEcCCeEEEEEe
Q 013914 155 VEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTT 233 (434)
Q Consensus 155 ~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~ 233 (434)
.+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.+ .+.+.+.+.+ .||++++++.+.++..
T Consensus 167 --~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i~~ 237 (338)
T 3itj_A 167 --AVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEAKG 237 (338)
T ss_dssp --TSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEEEE
T ss_pred --chhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEEEc
Confidence 11122578999999999999999999999999999999887765 2334455555 4999999999999987
Q ss_pred cCCCcEEEEEeCC-----CcEEECCEEEEcccCccChhhhhccccc-cCCcEEe-CCCCCCCCCcEEEeccccccccccc
Q 013914 234 NADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIET-DDFFKTSADDVYAVGDVATFPMKLY 306 (434)
Q Consensus 234 ~~~g~v~~v~~~~-----g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~v-d~~~~t~~~~iya~GD~~~~~~~~~ 306 (434)
+++.+..+++.+ ++++++|.||+|+|++|+.+++..++.. ++|++.+ |++++|+.|+|||+|||+..+.
T Consensus 238 -~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~--- 313 (338)
T 3itj_A 238 -DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY--- 313 (338)
T ss_dssp -SSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC---
T ss_pred -ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc---
Confidence 345566677765 4679999999999999999998777776 5788884 8899999999999999998432
Q ss_pred CcceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 307 REMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 307 ~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
+.+..|..+|+.||.+|...+.+
T Consensus 314 ------~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 314 ------RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ------cceeeehhhhHHHHHHHHHHHhc
Confidence 56888999999999999876543
No 66
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=4.4e-38 Score=291.25 Aligned_cols=284 Identities=14% Similarity=0.109 Sum_probs=197.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCC---CCCCC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSG---GERLL 78 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 78 (434)
+|++|||+||||||||++||.+|+++|++ |+|||++...+ .+. ...+++....+.. .....
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~---v~lie~~~~gg---------~~~----~~~~~~~~~~~~~~~~~~~~~ 66 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQ---IALFDNNTNRN---------RVT----QNSHGFITRDGIKPEEFKEIG 66 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCGG---------GGS----SCBCCSTTCTTBCHHHHHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCC---------eee----eecCCccCCCCCCHHHHHHHH
Confidence 35689999999999999999999999987 99999974311 010 0111111000000 00011
Q ss_pred hhhHhhc-CcEEEcCCeeEEEEC-C--CCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHH
Q 013914 79 PEWYKEK-GIELILSTEIVRADI-A--SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDA 151 (434)
Q Consensus 79 ~~~~~~~-~v~~~~~~~v~~i~~-~--~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~ 151 (434)
.+.+.++ ++.+... .+..+.. + ..++.+.+++++.||+||||||++|+.|+ +||.+ ...++++...+..
T Consensus 67 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~---i~G~~~~~~~~v~~~~~~~~~ 142 (304)
T 4fk1_A 67 LNEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPS---IPNVREYYGKSLFSCPYCDGW 142 (304)
T ss_dssp HHHHTTSTTEEEEEC-CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCS---CTTHHHHBTTTEESCHHHHSG
T ss_pred HHHHHhcCCEEEEee-EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccccc---ccCccccccceeeeccccchh
Confidence 1122233 4566665 4444433 2 23677888899999999999999999888 45532 3445543322211
Q ss_pred HHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 152 DKLVEAIKAKKNGKAVVVGGGY-IGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 152 ~~~~~~l~~~~~~~v~ViG~g~-~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
. .++++++|||+|. .++|+|..+.+.+.+|+++.+.+.+. +.+.+.+++.|++++.++ +..
T Consensus 143 ~--------~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~---------~~~~~~l~~~g~~~~~~~-v~~ 204 (304)
T 4fk1_A 143 E--------LKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS---------QTIMDELSNKNIPVITES-IRT 204 (304)
T ss_dssp G--------GTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC---------HHHHHHHHTTTCCEECSC-EEE
T ss_pred H--------hcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch---------hhhhhhhhccceeEeeee-EEE
Confidence 1 1567888888885 56899999999999999998765432 234567888999998775 777
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh-hccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCc
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 308 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~-~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~ 308 (434)
+.. +++.+..+++.+|+++++|.+++++|.+|++.++ ..++.+ ++|+|.||+++|||+|||||+|||++.+.
T Consensus 205 ~~~-~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~----- 278 (304)
T 4fk1_A 205 LQG-EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGP----- 278 (304)
T ss_dssp EES-GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSC-----
T ss_pred eec-CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcc-----
Confidence 765 4566778999999999999988887766655544 557777 67889999999999999999999997543
Q ss_pred ceecccHHHHHHHHHHHHHHHhccC
Q 013914 309 MRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 309 ~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+..|..+|+.||.+|...+
T Consensus 279 ----~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 279 ----SSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHHHHHH
Confidence 457788899999999886543
No 67
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.2e-37 Score=300.70 Aligned_cols=316 Identities=17% Similarity=0.176 Sum_probs=232.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCCh
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLP 79 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (434)
+.++||||||||+||+++|..|++ .+.+ |+|||+++...|. +.+.. +.... ... . .....+.
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~---Vtlie~~~~~~~~-~~~~~-~~~g~--~~~---~-----~~~~~l~ 66 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHE---VTLISANDYFQFV-PSNPW-VGVGW--KER---D-----DIAFPIR 66 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSE---EEEECSSSEEECG-GGHHH-HHHTS--SCH---H-----HHEEECH
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCE---EEEEeCCCCCccc-CCccc-cccCc--cCH---H-----HHHHHHH
Confidence 346899999999999999999999 5665 9999999764442 11100 00000 000 0 0123456
Q ss_pred hhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCC--CCeEEecCHHHHHHHHHH
Q 013914 80 EWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA--KNIFYLREIDDADKLVEA 157 (434)
Q Consensus 80 ~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~ 157 (434)
+++++.+++++.+ .++.++++.++|.+.+++++.||+||+|||+.|+.++ ++|.+. .+.+...+..++..+.+.
T Consensus 67 ~~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~---ipG~~~~~~~~~~~~~~~~a~~~~~~ 142 (437)
T 3sx6_A 67 HYVERKGIHFIAQ-SAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFEN---VPGSDPHEGPVQSICTVDHAERAFAE 142 (437)
T ss_dssp HHHHTTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGG---STTCSTTTSSEECCSSHHHHHHHHHH
T ss_pred HHHHHCCCEEEEe-EEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCccc---CCCCCcccCcceecccccHHHHHHHH
Confidence 7777889999875 9999999999999999989999999999999998877 566553 366777888888888776
Q ss_pred HHhC-CCCcEEEECCCHH----H--HHHH----HHHHhCCCe-----EEEEccCCccCCccC--CHHHHHHHHHHHHhcC
Q 013914 158 IKAK-KNGKAVVVGGGYI----G--LELS----AALKINNID-----VSMVYPEPWCMPRLF--TADIAAFYEGYYANKG 219 (434)
Q Consensus 158 l~~~-~~~~v~ViG~g~~----~--~e~a----~~l~~~g~~-----v~lv~~~~~~~~~~~--~~~~~~~~~~~l~~~G 219 (434)
+... ..++++|||+|+. | +|+| ..+.+.|.+ |+++++.+.+.+..+ .++..+.+.+.+++.|
T Consensus 143 ~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~g 222 (437)
T 3sx6_A 143 YQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEG 222 (437)
T ss_dssp HHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTT
T ss_pred HHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCC
Confidence 5432 2346688888554 3 7777 666677864 999999887633111 1357888999999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCC-----CcEEECCEEEEcccCccChhhhh-ccccccCCcEEeCCCCCC-CCCcE
Q 013914 220 IKIIKGTVAVGFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKT-SADDV 292 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~v~~v~~~~-----g~~~~~D~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t-~~~~i 292 (434)
|+++++++|++++. ++........+ ++++++|.+++++|++|+..+.+ .++..++|+|.||+++|| ++|||
T Consensus 223 I~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~I 300 (437)
T 3sx6_A 223 IEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANI 300 (437)
T ss_dssp CEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTE
T ss_pred CEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCE
Confidence 99999999999975 33211111233 46799999999999998877665 355447899999999999 99999
Q ss_pred EEecccccccccccCcc---eecccHHHHHHHHHHHHHHHhccCCCCcccC
Q 013914 293 YAVGDVATFPMKLYREM---RRVEHVDHARKSAEQAVKTIMATEGGKTVTG 340 (434)
Q Consensus 293 ya~GD~~~~~~~~~~~~---~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 340 (434)
||+|||+..+... +.+ ..++++..|..||+.+|+||.....|+++..
T Consensus 301 fa~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 301 FAAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp EECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred EEEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999876421 111 1236788999999999999999887765444
No 68
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=7.8e-39 Score=309.91 Aligned_cols=309 Identities=17% Similarity=0.158 Sum_probs=223.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
++|||||||+||+++|.+|++.+. +.+|+|||+++++.|. |.+............ ......+++++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~~~~~~~~~-p~l~~v~~g~~~~~~-----------i~~~~~~~~~~~ 69 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPHLAMGWRKFED-----------ISVPLAPLLPKF 69 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHHHHHTCSCGGG-----------SEEESTTTGGGG
T ss_pred CcEEEECCCHHHHHHHHHHhccCc-CCeEEEEcCCCCCccC-ccHHHHhcCCCCHHH-----------hhhcHHHHHHHC
Confidence 579999999999999999999863 5679999999876553 322111111000000 012345667778
Q ss_pred CcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhC-CCC
Q 013914 86 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK-KNG 164 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~-~~~ 164 (434)
+++++.+ +|+.||++.++|.+++|+++.||+||||||+++. ++ ++|.+ .+.+++++.+++.++++.+.+. ..+
T Consensus 70 gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~---i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~ 143 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQE-ENSTSICTAEHALETQKKLQELYANP 143 (430)
T ss_dssp TEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred CcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CC---ccCcc-cCcCCcccHHHHHHHHHHHHhhccCC
Confidence 9999997 8999999999999999999999999999999764 33 56643 3456677899998888877643 234
Q ss_pred cEEEECCCH------HHHHHH----HHHHhCC----CeEEEEccCCccCC--ccCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 165 KAVVVGGGY------IGLELS----AALKINN----IDVSMVYPEPWCMP--RLFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 165 ~v~ViG~g~------~~~e~a----~~l~~~g----~~v~lv~~~~~~~~--~~~~~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
.++|+|++. .+.|++ ..+.+.| .+|++++..+.+.. ....+...+.+.+.++++||++++++.|
T Consensus 144 ~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v 223 (430)
T 3hyw_A 144 GPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAV 223 (430)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEE
T ss_pred ceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceE
Confidence 455555542 233443 4455554 57899887765532 1245677888999999999999999999
Q ss_pred EEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCccChhhhhccccc---cCCcEEeCCCCC-CCCCcEEEeccccccc
Q 013914 229 VGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVAE---NKGGIETDDFFK-TSADDVYAVGDVATFP 302 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~~~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~---~~g~i~vd~~~~-t~~~~iya~GD~~~~~ 302 (434)
++++. ++ ..+...+| +++++|++++++|.+|+..+...+... .+|+|.||++|| |++|||||+|||+..+
T Consensus 224 ~~v~~--~~--~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p 299 (430)
T 3hyw_A 224 KAIEP--DK--VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp EEECS--SE--EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCC
T ss_pred EEEeC--Cc--eEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecC
Confidence 99964 32 23444444 479999999999999987666554333 456799999999 6999999999999876
Q ss_pred ccccCc--ceecccHHHHHHHHHHHHHHHhccCCCCc
Q 013914 303 MKLYRE--MRRVEHVDHARKSAEQAVKTIMATEGGKT 337 (434)
Q Consensus 303 ~~~~~~--~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 337 (434)
...... ...++....|.+||+++|+||+....|++
T Consensus 300 ~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 300 PIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 532111 11236788999999999999998877653
No 69
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=8.2e-37 Score=294.52 Aligned_cols=291 Identities=21% Similarity=0.259 Sum_probs=227.7
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
+||||||||+||+++|..|++ .|.+ |+|||+++...+. +.+...... ..... .....+.+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~---V~vie~~~~~~~~-~~~~~~~~~---~~~~~--------~~~~~~~~~~ 66 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD---VKVINKSRFSYFR-PALPHVAIG---VRDVD--------ELKVDLSEAL 66 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE---EEEEESSSEEEEC-CSSCCCCSS---CCCCC--------CEEEEHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEeCCCCceec-cchhhcccC---CcCHH--------HHHHHHHHHH
Confidence 589999999999999999999 6665 9999999764332 211110000 00000 1112345566
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEccCCc----EEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHH
Q 013914 83 KEKGIELILSTEIVRADIASKTLLSATGL----IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~----~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l 158 (434)
++.+++++.+ .++.++.+.+.|.+.++. ++.||+||+|||+.|+.++ ++|.+. ..++..+..++..+.+.+
T Consensus 67 ~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~---ipG~~~-~~~~~~~~~~~~~~~~~l 141 (409)
T 3h8l_A 67 PEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATEL---VKGWDK-YGYSVCEPEFATKLREKL 141 (409)
T ss_dssp GGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGG---SBTHHH-HCEESSSTTHHHHHHHHH
T ss_pred hhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccC---CCChhh-cCcCcCCHHHHHHHHHHH
Confidence 6789999998 999999999998887765 3999999999999988777 466442 456677888888888888
Q ss_pred HhCCCCcEEEECCCH-------------------------HHHHHH----HHHHhCCC----eEEEEccCCccCCccCCH
Q 013914 159 KAKKNGKAVVVGGGY-------------------------IGLELS----AALKINNI----DVSMVYPEPWCMPRLFTA 205 (434)
Q Consensus 159 ~~~~~~~v~ViG~g~-------------------------~~~e~a----~~l~~~g~----~v~lv~~~~~~~~~~~~~ 205 (434)
.... ++++|||+|. +++|+| ..+.+.|. +|+++++.+ +++. +++
T Consensus 142 ~~~~-~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~ 218 (409)
T 3h8l_A 142 ESFQ-GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD-LSP 218 (409)
T ss_dssp HHCC-SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT-BCH
T ss_pred HHhc-CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc-cCH
Confidence 7643 5667899991 466766 45567774 899999988 6664 789
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc--cccccCCcEEeCC
Q 013914 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG--QVAENKGGIETDD 283 (434)
Q Consensus 206 ~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~--~~~~~~g~i~vd~ 283 (434)
.+.+.+.+.+++.||+++++++|++++. + .+.+++|+++++|.+++++|++|+..+.+. ++..++|+|.||+
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~ 292 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDL 292 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBT
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCc
Confidence 9999999999999999999999999965 2 378899999999999999999999755555 3434678899999
Q ss_pred CCCC-CCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 284 FFKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 284 ~~~t-~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
++|| ++|||||+|||+..+.+ ..+..|..||+.||+||.+..
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHHHh
Confidence 9999 99999999999986443 678889999999999998876
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3e-37 Score=289.62 Aligned_cols=300 Identities=19% Similarity=0.208 Sum_probs=211.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCccccc-CCCCCCCChhh
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEW 81 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (434)
++++||+|||||++|+++|..|++.|++ |+|||+...... .....+.........+.+.... .......+.+.
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~~~~~~~---~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELK---PLLFEGWMANDI---APGGQLTTTTDVENFPGFPEGILGVELTDKFRKQ 79 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTTB---CTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeccCcccc---CCCceeeeccccccCCCCccCCCHHHHHHHHHHH
Confidence 4468999999999999999999999887 999998210000 0000111111111122221100 00001123345
Q ss_pred HhhcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccccCCCCCCCCC-------CCeEEecCHHHHH
Q 013914 82 YKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA-------KNIFYLREIDDAD 152 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~-------~~v~~~~~~~~~~ 152 (434)
+++.+++++.++ +..++.+.+ ++.+ ++.++.||++|+|||+.|..|+ +++.+. ..++++......
T Consensus 80 ~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~- 153 (333)
T 1vdc_A 80 SERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLS---FVGSGEVLGGFWNRGISACAVCDGA- 153 (333)
T ss_dssp HHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCC---CBTCSSSSSCCBTTTEESCHHHHTT-
T ss_pred HHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCC---CCCccccccccccCcEEEeccCccc-
Confidence 566799999985 888987665 5666 6778999999999999988776 455432 233322221111
Q ss_pred HHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 153 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 153 ~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
+....+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+++.||++++++++.++.
T Consensus 154 -----~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~i~ 222 (333)
T 1vdc_A 154 -----APIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVEAY 222 (333)
T ss_dssp -----SGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEE
T ss_pred -----hhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEEEe
Confidence 1112578999999999999999999999999999999887643 2322 2244578899999999999998
Q ss_pred ecCCC-cEEEEEeC---CC--cEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCC-CCCCCCcEEEeccccccccc
Q 013914 233 TNADG-EVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFPMK 304 (434)
Q Consensus 233 ~~~~g-~v~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~~t~~~~iya~GD~~~~~~~ 304 (434)
.+.++ .+..+.+. +| +++++|.|++|+|++|++++++.++.. ++|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 223 ~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~- 301 (333)
T 1vdc_A 223 GDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKY- 301 (333)
T ss_dssp ESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSC-
T ss_pred CCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhhcccCCCCEEEeeeccCCCc-
Confidence 73221 55556654 45 578999999999999999988766666 5789999997 6899999999999998642
Q ss_pred ccCcceecccHHHHHHHHHHHHHHHhccCC
Q 013914 305 LYREMRRVEHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 305 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.||.+|.....
T Consensus 302 --------~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 302 --------RQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------hhHHHHHHhHHHHHHHHHHHHH
Confidence 4678899999999999987553
No 71
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.9e-37 Score=286.13 Aligned_cols=283 Identities=16% Similarity=0.086 Sum_probs=206.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
++||+|||||+||+++|..|++.|++ |+|||+++..... +.. ...++.............+.+.+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGERRNRF-ASH---------SHGFLGQDGKAPGEIIAEARRQIER 68 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCCCGGGG-CSC---------CCSSTTCTTCCHHHHHHHHHHHHTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCccccc-chh---------hcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 38999999999999999999999986 9999997531100 000 0111111000000001122333444
Q ss_pred c-CcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhC
Q 013914 85 K-GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK 161 (434)
Q Consensus 85 ~-~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~ 161 (434)
. +++++.+ .++.++++.+ .+.+.++.++.||++|+|||+.|+.|+.+++.......+++..... .. ..
T Consensus 69 ~~~v~~~~~-~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~-~~-------~~ 139 (297)
T 3fbs_A 69 YPTIHWVEG-RVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCH-GY-------EL 139 (297)
T ss_dssp CTTEEEEES-CEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHH-TG-------GG
T ss_pred cCCeEEEEe-EEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCc-ch-------hh
Confidence 4 7888775 8999987654 5677788889999999999999887774332222224455432111 11 12
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 241 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~ 241 (434)
.+++++|+|+|++|+|+|..|.+.| +|+++.+.+.. +. +.+.+.+++.||+++. ++++++.. ++ .
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~----~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~ 204 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PD----ADQHALLAARGVRVET-TRIREIAG--HA---D 204 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CC----HHHHHHHHHTTCEEEC-SCEEEEET--TE---E
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CC----HHHHHHHHHCCcEEEc-ceeeeeec--CC---e
Confidence 5799999999999999999999999 99999887652 33 3456778899999996 88999975 32 6
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhhhc-ccccc---CC-cEEeCCCCCCCCCcEEEecccccccccccCcceecccHH
Q 013914 242 VKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAEN---KG-GIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVD 316 (434)
Q Consensus 242 v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~---~g-~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~ 316 (434)
+.+.+|+++++|.|++|+|++|+.++++. ++..+ .| ++.||++++|++|+|||+|||+..+ ..+.
T Consensus 205 v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~----------~~~~ 274 (297)
T 3fbs_A 205 VVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPA----------GSVA 274 (297)
T ss_dssp EEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTT----------CCHH
T ss_pred EEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCch----------HHHH
Confidence 88899999999999999999999887754 45543 45 7999999999999999999999863 5788
Q ss_pred HHHHHHHHHHHHHhccCC
Q 013914 317 HARKSAEQAVKTIMATEG 334 (434)
Q Consensus 317 ~A~~~g~~aa~~i~~~~~ 334 (434)
.|..+|+.||.+|.....
T Consensus 275 ~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 275 LAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHh
Confidence 899999999999986543
No 72
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.9e-36 Score=299.48 Aligned_cols=293 Identities=19% Similarity=0.246 Sum_probs=215.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||+++|.+|++.|.+ |+|+|+.....+ ........++.+...........+.+.++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~~GG~~---------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGERFGGQV---------LDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTTGGG---------TTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCe---EEEEECCCCCcc---------cccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999987 999987421000 00000111111110000000112344556
Q ss_pred hcCcEEEcCCeeEEEECC-----CCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHH
Q 013914 84 EKGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 158 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l 158 (434)
+.+++++.++.+..++++ ..++.+.++.++.||++|+|||+.|+.++.++........++++......
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~------- 351 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP------- 351 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGG-------
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchh-------
Confidence 789999999999999864 34577778888999999999999988777433322223456544332211
Q ss_pred HhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCC
Q 013914 159 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADG 237 (434)
Q Consensus 159 ~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g 237 (434)
...+++++|||+|++|+|+|..|++.|.+|+++++.+.+.. + ..+.+.+++ .||++++++.++++.. +++
T Consensus 352 -~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~-~~~ 422 (521)
T 1hyu_A 352 -LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKG-DGS 422 (521)
T ss_dssp -GGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEE-CSS
T ss_pred -hcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEc-CCC
Confidence 11578999999999999999999999999999999887754 3 345566666 6999999999999987 345
Q ss_pred cEEEEEeCC---Cc--EEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCCCCCCcEEEecccccccccccCccee
Q 013914 238 EVKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 311 (434)
Q Consensus 238 ~v~~v~~~~---g~--~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~ 311 (434)
++..+.+.+ |+ ++++|.|++|+|++||++++...+.. .+|+|.||+++||++|+|||+|||+..+.
T Consensus 423 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~-------- 494 (521)
T 1hyu_A 423 KVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPY-------- 494 (521)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSS--------
T ss_pred cEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCCCCCCCEEEeecccCCCc--------
Confidence 665666643 54 68999999999999999888765655 57899999999999999999999998653
Q ss_pred cccHHHHHHHHHHHHHHHhccC
Q 013914 312 VEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 312 ~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
+.+..|..+|+.||.++...+
T Consensus 495 -~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 495 -KQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHH
T ss_pred -ceeeehHHhHHHHHHHHHHHH
Confidence 467889999999999987643
No 73
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.6e-37 Score=287.02 Aligned_cols=292 Identities=17% Similarity=0.204 Sum_probs=209.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccC-CCCCCCChhh
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEW 81 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 81 (434)
++++||+|||||++|+++|..|++.|++ |+|||+..... .+.........+.+..... ......+.++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~gg--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLA---PLVFEGTSFGG--------ALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCC---CEEECCSSCSC--------GGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCC--------ceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 3468999999999999999999999887 99999763211 0111111112222211000 0001123345
Q ss_pred HhhcCcEEEcCCeeEEEECCC-CEE-EccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHHHH
Q 013914 82 YKEKGIELILSTEIVRADIAS-KTL-LSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVE 156 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~-~~v-~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~ 156 (434)
+++.+++++.++ +..++... .++ .+.+++++.||+||+|||+.|..|+ ++|.+ ...++++....+.
T Consensus 81 ~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~---i~g~~~~~~~~~~~~~~~~~~----- 151 (335)
T 2a87_A 81 ALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQ---VPGEQELLGRGVSSCATCDGF----- 151 (335)
T ss_dssp HHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCC---CTHHHHTBTTTEESCHHHHGG-----
T ss_pred HHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCC---CCchHhccCCceEEeeccchh-----
Confidence 566799999985 88888732 356 6677788999999999999988776 45432 2344433322221
Q ss_pred HHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013914 157 AIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 157 ~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~ 236 (434)
+ ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+++.||+++++++++++.. +
T Consensus 152 -~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~~--~ 220 (335)
T 2a87_A 152 -F--FRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVDG--D 220 (335)
T ss_dssp -G--GTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEEC--S
T ss_pred -h--cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEec--C
Confidence 1 2579999999999999999999999999999999887643 2222 12445779999999999999986 3
Q ss_pred CcEEEEEeC---CC--cEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCC-CCCCCCcEEEecccccccccccCcc
Q 013914 237 GEVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFPMKLYREM 309 (434)
Q Consensus 237 g~v~~v~~~---~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~~t~~~~iya~GD~~~~~~~~~~~~ 309 (434)
+.+..+.+. +| +++++|.|++|+|++|++++++.++.. ++|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 221 ~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~------ 294 (335)
T 2a87_A 221 TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTY------ 294 (335)
T ss_dssp SSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSC------
T ss_pred CcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCCccEEeCCCCCccCCCCEEEeeecCCccH------
Confidence 333344443 45 579999999999999999988766666 5789999996 6899999999999998642
Q ss_pred eecccHHHHHHHHHHHHHHHhccCC
Q 013914 310 RRVEHVDHARKSAEQAVKTIMATEG 334 (434)
Q Consensus 310 ~~~~~~~~A~~~g~~aa~~i~~~~~ 334 (434)
..+..|..+|+.||.+|...+.
T Consensus 295 ---~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 295 ---RQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhHHHHHHHHHHHhh
Confidence 4677888999999999876543
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.6e-35 Score=280.45 Aligned_cols=301 Identities=17% Similarity=0.255 Sum_probs=201.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCccCccccCCCCCCCCCCcccccCCC-------C
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPALSKAYLFPEGTARLPGFHVCVGSG-------G 74 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 74 (434)
+++||+|||||++|+++|..|+++|++ |+|||+++... |........+..+.....++++....... .
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEV 78 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHH
Confidence 368999999999999999999999987 99999986532 10000000011111111222211110000 0
Q ss_pred CCCChhhHhhcCcEEEcCCeeEEEECCCCE---EEccCCcEEEcceEEEecCC--CcccccCCCCCCCCC--CCeEEecC
Q 013914 75 ERLLPEWYKEKGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGS--TVLRLTDFGVEGADA--KNIFYLRE 147 (434)
Q Consensus 75 ~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~--~~~~~~~~~~~g~~~--~~v~~~~~ 147 (434)
...+.+.+++.+++++.++.|+.++.+.+. +.+.++ ++.||+||+|||. .|..|+ ++|... ...++...
T Consensus 79 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~---~~g~~~~~~~~~~~~~ 154 (357)
T 4a9w_A 79 LAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPE---YQGLESFAGIQLHSAH 154 (357)
T ss_dssp HHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCC---CTTGGGCCSEEEEGGG
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCC---CCCccccCCcEEEecc
Confidence 112334455679999999999999988776 666666 8999999999995 565666 455321 12232222
Q ss_pred HHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC-CccCCccC-CHHHHHHHHHHHH---------
Q 013914 148 IDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWCMPRLF-TADIAAFYEGYYA--------- 216 (434)
Q Consensus 148 ~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~-~~~~~~~~-~~~~~~~~~~~l~--------- 216 (434)
..+... ..+++++|||+|.+|+|+|..|.+.+ +|+++.+. +.+++..+ ...+.+.+.+.+.
T Consensus 155 ~~~~~~-------~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (357)
T 4a9w_A 155 YSTPAP-------FAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPD 226 (357)
T ss_dssp CCCSGG-------GTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC---------------
T ss_pred CCChhh-------cCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCC
Confidence 211111 15789999999999999999999998 69999987 55655432 2344333333332
Q ss_pred -------------------hcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccccC
Q 013914 217 -------------------NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENK 276 (434)
Q Consensus 217 -------------------~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~~~ 276 (434)
+.|+ +.....+.+++. ..+.+.+|+++++|.|++|+|++|++++++. ++..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~------~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~ 299 (357)
T 4a9w_A 227 LPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP------TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQ 299 (357)
T ss_dssp -------CBCCCHHHHHHHHTTC-CCEECCCSEEET------TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTT
T ss_pred cccccccCcccChhHHHHHhcCc-eEEecCcceEeC------CeeEECCCCEecCCEEEECCCcCCCCcccCcccccCCC
Confidence 3444 445556666654 2478899999999999999999999888754 565677
Q ss_pred CcEEeCCC--CCCCCCcEEEec--ccccccccccCcceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 277 GGIETDDF--FKTSADDVYAVG--DVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 277 g~i~vd~~--~~t~~~~iya~G--D~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
|+|.||++ ++|++|+|||+| ||+.... ..+..|..+|+.+|.+|...+.+
T Consensus 300 G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~---------~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 300 GQVEVDGSGLRALAVPSVWLLGYGDWNGMAS---------ATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SCBCBCTTSCBBSSCTTEEECSSCGGGSTTC---------SSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCccccCCcccCCCCCCeEEeccccccccch---------hhhhhhHHHHHHHHHHHHHHHHh
Confidence 89999999 899999999999 5665221 34556889999999999887654
No 75
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=4.3e-35 Score=284.05 Aligned_cols=304 Identities=17% Similarity=0.183 Sum_probs=219.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH--cCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 6 FKYVILGGGVSAGYAAREFAK--QGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~--~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+||||||||+||+++|.+|++ .+.+ |+|||+++...|. +.+.. +.... .... .....+.+.++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~---Vtlie~~~~~~~~-~~~~~-~~~g~--~~~~--------~~~~~~~~~~~ 67 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLK---ITLISDRPYFGFT-PAFPH-LAMGW--RKFE--------DISVPLAPLLP 67 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCE---EEEECSSSEEECG-GGHHH-HHHTC--SCGG--------GSEEESTTTGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCe---EEEECCCCCCCcC-CCcch-hccCc--cCHH--------HHHHHHHHHHH
Confidence 699999999999999999999 4444 9999999765442 11100 00000 0000 01123455667
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhC-C
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK-K 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~-~ 162 (434)
+.+++++.+ .++.++++.+.+.+.++.++.||+||+|||+.|..|. +.. ........+..++..+.+.++.. .
T Consensus 68 ~~gv~~~~~-~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg---~~~--~g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 68 KFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGA---EGQ--EENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCS---BTH--HHHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEE-EEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCC---CCC--cCCccCcCCHHHHHHHHHHHHHHHh
Confidence 789999986 9999999999999988888999999999999976542 211 01123445677777776655432 2
Q ss_pred CCcEEEECCCHHH------HHHH----HHHHhCC----CeEEEEccCCccCCcc--CCHHHHHHHHHHHHhcCcEEEcCC
Q 013914 163 NGKAVVVGGGYIG------LELS----AALKINN----IDVSMVYPEPWCMPRL--FTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 163 ~~~v~ViG~g~~~------~e~a----~~l~~~g----~~v~lv~~~~~~~~~~--~~~~~~~~~~~~l~~~GV~~~~~~ 226 (434)
.++++|||+|+.+ +|+| ..+.+.| .+|+++++.+.+.... -.++..+.+.+.+++.||++++++
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~ 221 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANV 221 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCC
Confidence 3456788887543 7777 4555667 5899999988763210 123578888999999999999999
Q ss_pred eEEEEEecCCCcEEEEEeCC----CcEEECCEEEEcccCccChhhhh--ccccccCC-cEEeCCCCCC-CCCcEEEeccc
Q 013914 227 VAVGFTTNADGEVKEVKLKD----GRTLEADIVVVGVGGRPLISLFK--GQVAENKG-GIETDDFFKT-SADDVYAVGDV 298 (434)
Q Consensus 227 ~v~~i~~~~~g~v~~v~~~~----g~~~~~D~vi~a~G~~p~~~~~~--~~~~~~~g-~i~vd~~~~t-~~~~iya~GD~ 298 (434)
.|++++. ++ +++++ ++++++|.+++++|++|+..+.+ .++..++| +|.||+++|| ++|||||+|||
T Consensus 222 ~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~ 295 (430)
T 3h28_A 222 AVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVV 295 (430)
T ss_dssp EEEEECS--SE----EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTT
T ss_pred EEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEee
Confidence 9999965 22 34444 67899999999999999876665 35644678 8999999999 99999999999
Q ss_pred ccccccccCcce---ecccHHHHHHHHHHHHHHHhccCCCCc
Q 013914 299 ATFPMKLYREMR---RVEHVDHARKSAEQAVKTIMATEGGKT 337 (434)
Q Consensus 299 ~~~~~~~~~~~~---~~~~~~~A~~~g~~aa~~i~~~~~~~~ 337 (434)
+..+... +.+. .+++...|..||+.+|+||.....|++
T Consensus 296 ~~~~~~~-~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 296 TAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp BCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eccCCcc-CCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9876421 1111 236788999999999999998877753
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.8e-34 Score=272.36 Aligned_cols=303 Identities=14% Similarity=0.153 Sum_probs=206.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCCCCC-CC-CCccCccccCCCCC---CCCCCcc--------c-
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEAVAP-YE-RPALSKAYLFPEGT---ARLPGFH--------V- 68 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~~~~-~~-~~~~~~~~~~~~~~---~~~~~~~--------~- 68 (434)
+++||+|||||++|+++|..|++.|. + |+|||+++... +. .+.. ..++.+... ..+..+. .
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~---v~lie~~~~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 78 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITD---VIILEKGTVGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAF 78 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSSTTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCc---EEEEecCCCCCccccCccc-ccccCcchhcccCCchhhhhccccccccc
Confidence 36899999999999999999999987 5 99999986110 00 0000 000000000 0000000 0
Q ss_pred ccCCC------CCCCChhhHhhcCcEEEcCCeeEEEECCC--CEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCC
Q 013914 69 CVGSG------GERLLPEWYKEKGIELILSTEIVRADIAS--KTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAK 140 (434)
Q Consensus 69 ~~~~~------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~ 140 (434)
..... ....+...+++.+++++.++.|+.++++. ..|.+.++ ++.||+||+|||+.+. |. +|+ .
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~---ip~---~ 150 (369)
T 3d1c_A 79 TFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PK---KPF---K 150 (369)
T ss_dssp HHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BC---CCS---S
T ss_pred cccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cC---CCC---C
Confidence 00000 00112234456799999998999998764 34665555 5999999999999865 33 344 2
Q ss_pred CeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc------cCCHHHHHHHHHH
Q 013914 141 NIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------LFTADIAAFYEGY 214 (434)
Q Consensus 141 ~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~------~~~~~~~~~~~~~ 214 (434)
.+++...+.+.. ..+.++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++. .+++...+.+.+.
T Consensus 151 ~~~~~~~~~~~~-------~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~ 223 (369)
T 3d1c_A 151 YGIHYSEIEDFD-------NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNV 223 (369)
T ss_dssp SCEEGGGCSCGG-------GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHH
T ss_pred ceechhhcCChh-------hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHH
Confidence 344443322221 125679999999999999999999999999999998887642 1457778899999
Q ss_pred HHhcC-cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE-CCEEEEcccCccChhhhhc-cccccCCcEEeCCC-CCCCCC
Q 013914 215 YANKG-IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGGRPLISLFKG-QVAENKGGIETDDF-FKTSAD 290 (434)
Q Consensus 215 l~~~G-V~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~-~D~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~-~~t~~~ 290 (434)
+++.| |++++++.|.+++..++ ...+.+.+|+++. +|.+|+|+|++|+.+++.. .+..++|++.||++ ++|++|
T Consensus 224 l~~~g~v~~~~~~~v~~i~~~~~--~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~ 301 (369)
T 3d1c_A 224 IKQGARIEMNVHYTVKDIDFNNG--QYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYP 301 (369)
T ss_dssp HHTTCCEEEECSCCEEEEEEETT--EEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSST
T ss_pred HhhCCcEEEecCcEEEEEEecCC--ceEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCC
Confidence 99997 99999999999975222 2467888997665 6999999999999965543 44445678999986 678999
Q ss_pred cEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 291 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 291 ~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
+|||+|||+..+.... ..+..+.+||+.+|++|.+..
T Consensus 302 ~v~a~GD~~~~~~~~~------~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 302 NIFMIGATVENDNAKL------CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp TEEECSTTCCCSSCCC------CSHHHHGGGHHHHHHHHHHHT
T ss_pred CeEEeccccccCCeeE------EEEehhhHHHHHHHHHHhccc
Confidence 9999999998755421 345567789999999998764
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=2.9e-34 Score=278.20 Aligned_cols=287 Identities=20% Similarity=0.221 Sum_probs=203.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+.+||+|||||+||+++|..|++.|++ |+|||+.+..+. ++.. .+|.+... ........++++
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~~~~GG--------~l~~----gip~~~~~--~~~~~~~~~~l~ 183 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRYDRMGG--------LLVY----GIPGFKLE--KSVVERRVKLLA 183 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSCST--------HHHH----TSCTTTSC--HHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeccCCCCC--------eeee----cCCCccCC--HHHHHHHHHHHH
Confidence 358999999999999999999999987 999999865321 1100 11211100 000122345677
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCC-cccccCCCCCCCCCCCeEEecCHHHHHHHHHH-----
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VLRLTDFGVEGADAKNIFYLREIDDADKLVEA----- 157 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~----- 157 (434)
+.|++++.++.+. +.+.+.+. .+.||++|+|||+. |+.++ ++|.+.+++++..++.........
T Consensus 184 ~~gv~~~~~~~v~------~~v~~~~~-~~~~d~vvlAtG~~~~~~~~---ipG~~~~gv~~a~~~l~~~~~~~~~~~~~ 253 (456)
T 2vdc_G 184 DAGVIYHPNFEVG------RDASLPEL-RRKHVAVLVATGVYKARDIK---APGSGLGNIVAALDYLTTSNKVSLGDTVE 253 (456)
T ss_dssp HTTCEEETTCCBT------TTBCHHHH-HSSCSEEEECCCCCEECCTT---CSCCTTTTEEEHHHHHHHHHHHHCTTTCS
T ss_pred HCCcEEEeCCEec------cEEEhhHh-HhhCCEEEEecCCCCCCCCC---CCCCcCCCcEEHHHHHHHhhhhhcccccc
Confidence 7899999986542 22333332 25799999999996 55555 688777788764433221111100
Q ss_pred -----HHhCCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCcc-CCccCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 158 -----IKAKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWC-MPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 158 -----l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~-~v~lv~~~~~~-~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
.....+++|+|||+|.+|+|+|..+.+.|. +|+++++.+.. ++. .+.+ .+.+++.||++++++.+++
T Consensus 254 ~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~ 327 (456)
T 2vdc_G 254 AYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEG 327 (456)
T ss_dssp SCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEECCSSSCC
T ss_pred cccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEeCCCceE
Confidence 011257899999999999999999999997 59999998876 553 2332 2457788999999999988
Q ss_pred EEecCCCcEEEEEe---------C---------CC--cEEECCEEEEcccCccChh--hhh-ccccc-cCCcEEeCCC-C
Q 013914 231 FTTNADGEVKEVKL---------K---------DG--RTLEADIVVVGVGGRPLIS--LFK-GQVAE-NKGGIETDDF-F 285 (434)
Q Consensus 231 i~~~~~g~v~~v~~---------~---------~g--~~~~~D~vi~a~G~~p~~~--~~~-~~~~~-~~g~i~vd~~-~ 285 (434)
+.. ++++..+++ . +| .++++|.||+|+|++|++. ++. .++.. .+|+|.||++ +
T Consensus 328 i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~ 405 (456)
T 2vdc_G 328 FTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTK 405 (456)
T ss_dssp EEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTC
T ss_pred EeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCC
Confidence 875 343322222 1 23 4689999999999999875 444 35666 6789999997 9
Q ss_pred CCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCC
Q 013914 286 KTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 335 (434)
Q Consensus 286 ~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 335 (434)
||+.|+|||+|||+..+ .++..|+.+|+.||.+|...+.+
T Consensus 406 ~Ts~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 406 MTNMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp BCSSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999998764 46888999999999999876544
No 78
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=3.2e-33 Score=295.92 Aligned_cols=317 Identities=17% Similarity=0.198 Sum_probs=217.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||+|||||+||++||.+|++.|+. +|+|||+.+..+.. +. ..+|.+.... .......+++++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG~--------~~----~~ip~~~~~~--~~~~~~~~~~~~ 250 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQEYVGGL--------ST----SEIPQFRLPY--DVVNFEIELMKD 250 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSCSTH--------HH----HTSCTTTSCH--HHHHHHHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCCCCcc--------cc----ccCCcccCCH--HHHHHHHHHHHH
Confidence 57999999999999999999999972 29999998643211 10 0111111100 000112356677
Q ss_pred cCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCC-CcccccCCCCCCCC-CCCeEEecCHHHHHHHHHH-----
Q 013914 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGS-TVLRLTDFGVEGAD-AKNIFYLREIDDADKLVEA----- 157 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~-~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~~~~~----- 157 (434)
.|++++.++.+. .+.+.+.++.++.||+||||||+ .|+.++. ++|.+ ..++++..++.........
T Consensus 251 ~gv~~~~~~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~--~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~ 323 (1025)
T 1gte_A 251 LGVKIICGKSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDI--FQGLTQDQGFYTSKDFLPLVAKSSKAGMCA 323 (1025)
T ss_dssp TTCEEEESCCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGG--GTTCCTTTTEEEHHHHHHHHHHHHCBTTBS
T ss_pred CCcEEEcccEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCC--CCCCCCCCCEEEhHHHHHHHHhhccccccc
Confidence 899999986652 23455555555789999999999 5876664 23432 3567754432221110000
Q ss_pred HH---hCCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCc-cCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 158 IK---AKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW-CMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 158 l~---~~~~~~v~ViG~g~~~~e~a~~l~~~g~-~v~lv~~~~~-~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
+. ...+++++|||+|++|+|+|..+.+.|. +|+++++.++ .++. ++.++ +.+++.||++++++.+.++.
T Consensus 324 ~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e~-----~~~~~~Gv~~~~~~~~~~i~ 397 (1025)
T 1gte_A 324 CHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEEV-----ELAKEEKCEFLPFLSPRKVI 397 (1025)
T ss_dssp CCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHHH-----HHHHHTTCEEECSEEEEEEE
T ss_pred ccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHHH-----HHHHHcCCEEEeCCCceEEE
Confidence 00 1135799999999999999999999996 8999999884 4443 44443 45778999999999999997
Q ss_pred ecCCCcEEEEEeC------CC---------cEEECCEEEEcccCccC-hhhhhc--cccc-cCCcEEeCC-CCCCCCCcE
Q 013914 233 TNADGEVKEVKLK------DG---------RTLEADIVVVGVGGRPL-ISLFKG--QVAE-NKGGIETDD-FFKTSADDV 292 (434)
Q Consensus 233 ~~~~g~v~~v~~~------~g---------~~~~~D~vi~a~G~~p~-~~~~~~--~~~~-~~g~i~vd~-~~~t~~~~i 292 (434)
. +++++..+++. +| .++++|.||+|+|++|+ ..++.. ++.. .+|+|.||+ ++||+.|+|
T Consensus 398 ~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~V 476 (1025)
T 1gte_A 398 V-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWV 476 (1025)
T ss_dssp E-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTE
T ss_pred c-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCE
Confidence 6 35666656542 23 36899999999999864 555543 5666 578899997 899999999
Q ss_pred EEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCC---CCcccCCCCCCeeEE--eccCceeEEeec
Q 013914 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG---GKTVTGYDYLPYFYS--RAFDLSWQFYGD 361 (434)
Q Consensus 293 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~~~~p~~~~--~~~~~~~~~~g~ 361 (434)
||+|||+..+ ..+..|..+|+.||.+|.+.+. +.....+..+|++|+ ...++.....|.
T Consensus 477 fA~GD~~~~~----------~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 477 FAGGDIVGMA----------NTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp EECSGGGCSC----------CCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred EEeCCCCCCc----------hHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 9999999754 4577788999999999986432 222235667888887 455555555554
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=2.8e-33 Score=271.98 Aligned_cols=291 Identities=13% Similarity=0.156 Sum_probs=202.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..+||+|||||+||+++|..|++.| +..+|+|||+++.. +. .+.... .|.+... ......+.++++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~~~V~vie~~~~~-gg-------~~~~g~---~p~~~~~--~~~~~~~~~~~~ 70 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH-SRAHVDIYEKQLVP-FG-------LVRFGV---APDHPEV--KNVINTFTQTAR 70 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC-SSCEEEEECSSSSS-CT-------HHHHTS---CTTCGGG--GGHHHHHHHHHT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC-CCCCEEEEeCCCcC-Cc-------eeeccc---CCCCccH--HHHHHHHHHHHH
Confidence 3589999999999999999999987 23449999998653 21 110000 0111100 000112345566
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCc-ccccCCCCCCCCCCCeEEecCHHHHHHHHHH-----
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTV-LRLTDFGVEGADAKNIFYLREIDDADKLVEA----- 157 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~-~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~----- 157 (434)
+.+++++.++.+ .+.|.+.+. .+.||+||+|||+.| +.|+ +||.+.+++++..++.. +.+.
T Consensus 71 ~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~---ipG~~~~gv~~~~~~~~---~~~~~~d~~ 137 (460)
T 1cjc_A 71 SDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALD---IPGEELPGVFSARAFVG---WYNGLPENR 137 (460)
T ss_dssp STTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCC---CTTTTSTTEEEHHHHHH---HHTTCGGGT
T ss_pred hCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCC---CCCCCCCcEEEHHHHHH---HhhcCcccc
Confidence 778999987654 233444432 468999999999995 6565 67777778887654422 1111
Q ss_pred -HH-hCCCCcEEEECCCHHHHHHHHHHH--------------------hCCC-eEEEEccCCccC--------------C
Q 013914 158 -IK-AKKNGKAVVVGGGYIGLELSAALK--------------------INNI-DVSMVYPEPWCM--------------P 200 (434)
Q Consensus 158 -l~-~~~~~~v~ViG~g~~~~e~a~~l~--------------------~~g~-~v~lv~~~~~~~--------------~ 200 (434)
+. ...+++++|||+|++|+|+|..|. +.|. +|+++.+.+.+. +
T Consensus 138 ~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp 217 (460)
T 1cjc_A 138 ELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLP 217 (460)
T ss_dssp TCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCT
T ss_pred ccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCC
Confidence 00 114789999999999999999998 5676 799999987652 2
Q ss_pred c--------c----------CCHH---HHHHHHHHHHh--------------cCcEEEcCCeEEEEEecCCC-cEEEEEe
Q 013914 201 R--------L----------FTAD---IAAFYEGYYAN--------------KGIKIIKGTVAVGFTTNADG-EVKEVKL 244 (434)
Q Consensus 201 ~--------~----------~~~~---~~~~~~~~l~~--------------~GV~~~~~~~v~~i~~~~~g-~v~~v~~ 244 (434)
. . ++.. +.+.+.+.+++ .||++++++.+.+|..++++ ++..+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~ 297 (460)
T 1cjc_A 218 GTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRL 297 (460)
T ss_dssp TEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEE
T ss_pred CceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEE
Confidence 1 0 0111 23344455555 89999999999999874335 6655655
Q ss_pred C---------------CC--cEEECCEEEEcccCccChhhhhccc-cc-cCCcEEeCCCCCCC-CCcEEEeccccccccc
Q 013914 245 K---------------DG--RTLEADIVVVGVGGRPLISLFKGQV-AE-NKGGIETDDFFKTS-ADDVYAVGDVATFPMK 304 (434)
Q Consensus 245 ~---------------~g--~~~~~D~vi~a~G~~p~~~~~~~~~-~~-~~g~i~vd~~~~t~-~~~iya~GD~~~~~~~ 304 (434)
. +| ++++||+|++|+|++|++ + .++ .+ ++|+|.||+++||+ +|+|||+|||+..+.
T Consensus 298 ~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~- 373 (460)
T 1cjc_A 298 AVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT- 373 (460)
T ss_dssp EEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT-
T ss_pred EEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC-
Confidence 3 34 579999999999999997 3 456 56 56889999999998 799999999997543
Q ss_pred ccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 305 LYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 305 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+..|..+|+.+|.+|++..
T Consensus 374 --------~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 374 --------GVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccHHHHHHHHHHHHHHHHHHH
Confidence 346678899999999998764
No 80
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=100.00 E-value=1.3e-32 Score=289.27 Aligned_cols=284 Identities=16% Similarity=0.218 Sum_probs=207.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||||||||+||++||.+|++.|++ |+|||+++..+ .. ++.. ....+++... ........+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~---V~lie~~~~~G-G~------~~~~-~k~~i~~~~~---~~~~~~~~~~l~~ 193 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGAR---VMLLDERAEAG-GT------LLDT-AGEQIDGMDS---SAWIEQVTSELAE 193 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSS-GG------GGGS-SCCEETTEEH---HHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCC-ce------eccC-CccccCCCCH---HHHHHHHHHHHhh
Confidence 57999999999999999999999987 99999986532 10 1100 0000111000 0000111223334
Q ss_pred -cCcEEEcCCeeEEEECCCCEEE---------c--------cCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEec
Q 013914 85 -KGIELILSTEIVRADIASKTLL---------S--------ATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLR 146 (434)
Q Consensus 85 -~~v~~~~~~~v~~i~~~~~~v~---------~--------~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~ 146 (434)
.+++++.++.|+.++....... + .++.++.||+||||||+.|+.++ ++|.+.+++++..
T Consensus 194 ~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~---ipG~~~~gv~~~~ 270 (965)
T 2gag_A 194 AEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIV---FENNDRPGIMLAG 270 (965)
T ss_dssp STTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCC---CBTCCSTTEEEHH
T ss_pred cCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCC---CCCCCCCCEEEhH
Confidence 4899999988998876543211 1 11236899999999999998777 6887778888765
Q ss_pred CHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCC
Q 013914 147 EIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~ 226 (434)
+..+. .+.....++++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ . .+.+++.||++++++
T Consensus 271 ~~~~~---l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~~~~ 337 (965)
T 2gag_A 271 AVRSY---LNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVISGS 337 (965)
T ss_dssp HHHHH---HHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEEETE
T ss_pred HHHHH---HHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEEeCC
Confidence 44322 2211122468999999999999999999999999999999877643 1 466889999999999
Q ss_pred eEEEEEecCCCcEEEEEeCC-------C--cEEECCEEEEcccCccChhhhhccccccCCcEEeCCCCC-----CCCCcE
Q 013914 227 VAVGFTTNADGEVKEVKLKD-------G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFK-----TSADDV 292 (434)
Q Consensus 227 ~v~~i~~~~~g~v~~v~~~~-------g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~-----t~~~~i 292 (434)
.+.++..++++++..+++.+ | +++++|.|++|+|++|+++++.. .+++|.+|++++ |++|+|
T Consensus 338 ~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~----~~g~i~vd~~~~~~v~~ts~p~I 413 (965)
T 2gag_A 338 VVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ----RQGKLDWDTTIHAFVPADAVANQ 413 (965)
T ss_dssp EEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH----TTCCEEEETTTTEEEECSCCTTE
T ss_pred EeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh----CCCcEEEcCcccccccCCCCCCE
Confidence 99999873245666676654 5 57999999999999999988753 257899999988 899999
Q ss_pred EEecccccccccccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 293 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 293 ya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
||+|||++.+. +..|..+|+.||.+|.+..
T Consensus 414 yAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~~l 443 (965)
T 2gag_A 414 HLAGAMTGRLD-----------TASALSTGAATGAAAATAA 443 (965)
T ss_dssp EECGGGGTCCS-----------HHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCchh-----------HHHHHHHHHHHHHHHHHHc
Confidence 99999998642 3478899999999998764
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.98 E-value=4.3e-33 Score=270.40 Aligned_cols=287 Identities=17% Similarity=0.213 Sum_probs=198.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-c------CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAK-Q------GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGER 76 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~------g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (434)
+.+||+|||||+||+++|..|++ . +.+ |+|||+.+.. +..+ ..+. .|.... ......
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~---V~lie~~~~~-gg~~--~~gv--------~p~~~~--~~~~~~ 65 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMA---VDMLEMLPTP-WGLV--RSGV--------APDHPK--IKSISK 65 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEE---EEEEESSSSC-STHH--HHTS--------CTTCTG--GGGGHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCe---EEEEecCCCC-CCcc--cccc--------CCCCCC--HHHHHH
Confidence 46899999999999999999999 7 665 9999998652 2111 0000 011000 000011
Q ss_pred CChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCC-cccccCCCCCCCCCCCeEEecCHHHHHHHH
Q 013914 77 LLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VLRLTDFGVEGADAKNIFYLREIDDADKLV 155 (434)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 155 (434)
.+.+++++.+++++.+..+ .+.|.+.++ ++.||+||+|||+. |+.++ ++|.+..++++..++. .+.
T Consensus 66 ~~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~~~~---ipG~~~~gv~~~~~~~---~~~ 132 (456)
T 1lqt_A 66 QFEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDRMLN---IPGEDLPGSIAAVDFV---GWY 132 (456)
T ss_dssp HHHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCC---CTTTTSTTEEEHHHHH---HHH
T ss_pred HHHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCCCCC---CCCCCCCCcEEHHHHH---hhh
Confidence 2334556678999887442 234555444 47899999999997 56665 6777667787655432 211
Q ss_pred HH-------HHhCCCCcEEEECCCHHHHHHHHHHHhC--------------------C-CeEEEEccCCccCCccCCH--
Q 013914 156 EA-------IKAKKNGKAVVVGGGYIGLELSAALKIN--------------------N-IDVSMVYPEPWCMPRLFTA-- 205 (434)
Q Consensus 156 ~~-------l~~~~~~~v~ViG~g~~~~e~a~~l~~~--------------------g-~~v~lv~~~~~~~~~~~~~-- 205 (434)
+. +....+++++|||+|++|+|+|..|.+. | .+|+++.+.+.+...+..+
T Consensus 133 ~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~el 212 (456)
T 1lqt_A 133 NAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLEL 212 (456)
T ss_dssp TTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHH
T ss_pred hcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHH
Confidence 11 1112478999999999999999999874 5 5999999988765431111
Q ss_pred ----------------HH------------------HHHHHHHHHh------cCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013914 206 ----------------DI------------------AAFYEGYYAN------KGIKIIKGTVAVGFTTNADGEVKEVKLK 245 (434)
Q Consensus 206 ----------------~~------------------~~~~~~~l~~------~GV~~~~~~~v~~i~~~~~g~v~~v~~~ 245 (434)
++ .+.+.+.+++ .||++++++.+.++.. ++++..+++.
T Consensus 213 rel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~ 290 (456)
T 1lqt_A 213 RELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLG 290 (456)
T ss_dssp HHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEE
T ss_pred HHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEE
Confidence 11 2344455555 7999999999999986 3444444443
Q ss_pred ----------------CC--cEEECCEEEEcccCccChhhhhccccc-cCCcEEeCCCCC-CCCCcEEEecccccccccc
Q 013914 246 ----------------DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFK-TSADDVYAVGDVATFPMKL 305 (434)
Q Consensus 246 ----------------~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~-t~~~~iya~GD~~~~~~~~ 305 (434)
+| ++++||+|++|+|++|++ + .++.+ ++|++.+|+++| |+.|+|||+|||+..+.
T Consensus 291 ~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l--~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~-- 365 (456)
T 1lqt_A 291 RNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T--PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT-- 365 (456)
T ss_dssp EEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C--TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSC--
T ss_pred EEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-C--CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCc--
Confidence 34 468999999999999998 3 35555 568899999999 79999999999997543
Q ss_pred cCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 306 YREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 306 ~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+..|..+|+.+|.+|++..
T Consensus 366 -------~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 366 -------GVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp -------SCTTHHHHHHHHHHHHHHHHH
T ss_pred -------hhHHHHHHHHHHHHHHHHHHH
Confidence 234567889999999998764
No 82
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=6.2e-32 Score=264.81 Aligned_cols=313 Identities=15% Similarity=0.071 Sum_probs=196.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-----CCCCcEEEEeCCCCCCCCCCccCccccC----------CCCCCCCCCcc--
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQG-----VKPGELAIISKEAVAPYERPALSKAYLF----------PEGTARLPGFH-- 67 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g-----~~~~~V~vie~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-- 67 (434)
++||+|||||+||+++|..|++.| .+ |+|||+++...|....+...... ...+.....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~---v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALE---VLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCC---EEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCccc---EEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 469999999999999999999998 66 99999998766543221110000 00000000000
Q ss_pred -cccC--------CCC---C----CCChhhHhhcCcEEEcCCeeEEEECC---CC----EEEccCCc----EEEcceEEE
Q 013914 68 -VCVG--------SGG---E----RLLPEWYKEKGIELILSTEIVRADIA---SK----TLLSATGL----IFKYQILVI 120 (434)
Q Consensus 68 -~~~~--------~~~---~----~~~~~~~~~~~v~~~~~~~v~~i~~~---~~----~v~~~~~~----~~~~d~lvl 120 (434)
...+ ... . ..+....++.++++..+++|+.++.+ .+ +|.+.++. ++.||+||+
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVl 186 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVV 186 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEE
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEE
Confidence 0000 000 0 01112223457889999889999876 43 56666664 899999999
Q ss_pred ecCCCcccccCCCCCCCCCC-CeEEecCHHH-HHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCC
Q 013914 121 ATGSTVLRLTDFGVEGADAK-NIFYLREIDD-ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEP 196 (434)
Q Consensus 121 AtG~~~~~~~~~~~~g~~~~-~v~~~~~~~~-~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~ 196 (434)
|||+.|..|+. +++.... .+++.....+ ...+.... ..+++++|||+|.+|+|+|..|.+. +.+|+++.+.+
T Consensus 187 AtG~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 187 SPGGTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSS--GKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CCCCEECCCGG--GGGGTTCTTEEEGGGHHHHHCC---------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCCCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcc--cCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 99998887763 3333333 5665544333 22221111 1478999999999999999999999 99999999998
Q ss_pred ccCCcc--------C-----------CHHHHHHHHHHHHh--------------------------cCcEEEcCCeEEEE
Q 013914 197 WCMPRL--------F-----------TADIAAFYEGYYAN--------------------------KGIKIIKGTVAVGF 231 (434)
Q Consensus 197 ~~~~~~--------~-----------~~~~~~~~~~~l~~--------------------------~GV~~~~~~~v~~i 231 (434)
.+++.. + +++....+.+.+.. .||++++++.|+++
T Consensus 263 ~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v 342 (463)
T 3s5w_A 263 ALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERA 342 (463)
T ss_dssp SCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEE
T ss_pred CCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEE
Confidence 775521 1 22222222222222 69999999999999
Q ss_pred EecCCCcEEEEEeC---CCcE--EECCEEEEcccCccC--hhhhhccccccCCcEEeCCCCCCC-----CCcEEEecccc
Q 013914 232 TTNADGEVKEVKLK---DGRT--LEADIVVVGVGGRPL--ISLFKGQVAENKGGIETDDFFKTS-----ADDVYAVGDVA 299 (434)
Q Consensus 232 ~~~~~g~v~~v~~~---~g~~--~~~D~vi~a~G~~p~--~~~~~~~~~~~~g~i~vd~~~~t~-----~~~iya~GD~~ 299 (434)
..++++ ..+.+. +|+. +++|.||+|+|++|+ .+++....... |++.||+++|+. .|+|||+|||.
T Consensus 343 ~~~~~~--~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~ 419 (463)
T 3s5w_A 343 TATAQG--IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQ 419 (463)
T ss_dssp EEETTE--EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCH
T ss_pred EecCCE--EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-CCcccCcccccccCCCCCCeEEEcCCCc
Confidence 873333 456665 6754 899999999999999 45543211112 899999999973 56799999998
Q ss_pred cccccccCcceecccHHHHHHHHHHHHHHHhcc
Q 013914 300 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
...... .+ .....|.+++.++...+...
T Consensus 420 ~~~g~~--~~---~l~~~a~r~~~i~~~~~~~~ 447 (463)
T 3s5w_A 420 ASHGLS--DT---LLSVLPVRAEEISGSLYQHL 447 (463)
T ss_dssp HHHCTT--TT---SSTTHHHHHHHHHHHHHHHH
T ss_pred ccCCcC--cc---chhHHHHHHHHHHHHHHhhc
Confidence 754321 11 23345667777665554433
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=4.3e-31 Score=257.65 Aligned_cols=285 Identities=15% Similarity=0.156 Sum_probs=195.6
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCC----CCC-C-cc-----CccccCCC-------CCCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAP----YER-P-AL-----SKAYLFPE-------GTARLP 64 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~----~~~-~-~~-----~~~~~~~~-------~~~~~~ 64 (434)
+||+|||||+||+++|..|++ .|.+..+|+|||+++..+ +.. + +. ....++.. ....++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 776534599999986532 100 0 00 00000000 000111
Q ss_pred CcccccC-----CC------CCCCChhhHhhcCcE--EEcCCeeEEEECCCC----EEEccC---C--cEEEcceEEEec
Q 013914 65 GFHVCVG-----SG------GERLLPEWYKEKGIE--LILSTEIVRADIASK----TLLSAT---G--LIFKYQILVIAT 122 (434)
Q Consensus 65 ~~~~~~~-----~~------~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~----~v~~~~---~--~~~~~d~lvlAt 122 (434)
++..... .. ....+.+++++.+++ +..++.|+.++.... +|.+.+ + .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 1111000 00 001122334456777 888889999987655 566544 3 578999999999
Q ss_pred C--CCcccccCCCCCCCCC--CCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 123 G--STVLRLTDFGVEGADA--KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 123 G--~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
| +.|+.|+ ++|.+. ..+++..++.+... ..+++|+|||+|.+|+|+|..|.+.|.+|+++.+.+.+
T Consensus 163 G~~s~p~~p~---ipG~~~~~g~~~hs~~~~~~~~-------~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 163 GHFSTPYVPE---FEGFEKFGGRILHAHDFRDALE-------FKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp CSSSSBCCCC---CBTTTTCCSEEEEGGGCCCGGG-------GTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCCCCccCC---CCCcccCCceEEehhhhCCHhH-------cCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 9 8888887 455432 23455443332211 25899999999999999999999999999999998887
Q ss_pred CCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc--cccccC
Q 013914 199 MPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG--QVAENK 276 (434)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~--~~~~~~ 276 (434)
++..++ .||+++ ..|++++. + .|.+.+|+++++|.||+|||++|+.+++.. ++..++
T Consensus 233 ~~~~~~-------------~~V~~~--~~V~~i~~---~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~ 291 (464)
T 2xve_A 233 MGYKWP-------------ENWDER--PNLVRVDT---E---NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNN 291 (464)
T ss_dssp CCCCCC-------------TTEEEC--SCEEEECS---S---EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCS
T ss_pred CCCCCC-------------CceEEc--CCeEEEeC---C---EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCC
Confidence 764322 478887 67888853 2 478899999999999999999999988764 445444
Q ss_pred C-cEEeCCC---CCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 277 G-GIETDDF---FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 277 g-~i~vd~~---~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
+ .+ ++.+ ++|+.|+||++|||+.. ..+..|..||+.+++++.+..
T Consensus 292 ~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-----------~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 292 RLWP-LNLYKGVVWEDNPKFFYIGMQDQW-----------YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp SSCC-SSEETTTEESSSTTEEECSCSCCS-----------SCHHHHHHHHHHHHHHHTTSS
T ss_pred Cccc-ccccceEecCCCCCEEEEeCcccc-----------cchHHHHHHHHHHHHHHcCCC
Confidence 4 44 4433 56899999999998863 356778899999999998753
No 84
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.4e-31 Score=263.12 Aligned_cols=257 Identities=15% Similarity=0.107 Sum_probs=190.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
.++||+|||||+||+++|.+|++. .+ |+|||+++..++.....+... ..++. . ...+...+.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~---V~vie~~~~~GG~~~~~~~~~------~g~~~-~-------~~~~~~~l~ 168 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LT---VALIEERGWLGGDMWLKGIKQ------EGFNK-D-------SRKVVEELV 168 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CC---EEEECTTSSSSCSGGGTCSEE------TTTTE-E-------HHHHHHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CC---EEEEeCCCCCCCeeecccccc------CCCCC-C-------HHHHHHHHH
Confidence 357999999999999999999998 65 999999976543321111100 00110 0 001111111
Q ss_pred ---hcCcEEEcCCeeEEEECCCCEEEc---cCCc--EEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHH
Q 013914 84 ---EKGIELILSTEIVRADIASKTLLS---ATGL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLV 155 (434)
Q Consensus 84 ---~~~v~~~~~~~v~~i~~~~~~v~~---~~~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 155 (434)
..+++++.++.+..++.+.+.+.. .+++ .+.||++|+|||+.|+.|+ ++|.+.+++++.. ++..+.
T Consensus 169 ~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~---~~g~~~~gv~~~~---~~~~~~ 242 (493)
T 1y56_A 169 GKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTML---FENNDMPGVFRRD---FALEVM 242 (493)
T ss_dssp HTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCC---CTTTTSTTEEEHH---HHHHHH
T ss_pred HHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCC---CCCCCCCCEEEcH---HHHHHH
Confidence 458999998888888877764432 3443 6899999999999998777 6777777887643 344333
Q ss_pred HHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013914 156 EAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 156 ~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~ 235 (434)
+.....++++++|+|+|++++| +.+++.||++++++.|.++..
T Consensus 243 ~~~~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~-- 285 (493)
T 1y56_A 243 NVWEVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVHIPNVKRVEG-- 285 (493)
T ss_dssp HTSCBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEECSSEEEEEC--
T ss_pred HhcccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEec--
Confidence 3222235689999999999988 456788999999999999986
Q ss_pred CCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc---cCCcEE-eCCCCCCCCCcEEEecccccccccccCcce
Q 013914 236 DGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE---NKGGIE-TDDFFKTSADDVYAVGDVATFPMKLYREMR 310 (434)
Q Consensus 236 ~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~-~~~~---~~g~i~-vd~~~~t~~~~iya~GD~~~~~~~~~~~~~ 310 (434)
++.+..+.+.+|+++++|.|++|+|++|+++++.. ++.. ++|++. ||+++| +.|+|||+|||++.
T Consensus 286 ~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~--------- 355 (493)
T 1y56_A 286 NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSI--------- 355 (493)
T ss_dssp SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCC---------
T ss_pred CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCc---------
Confidence 34456778889999999999999999999988754 4433 467777 899999 99999999999975
Q ss_pred ecccHHHHHHHHHHHHHHHhccC
Q 013914 311 RVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 311 ~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
.++..|..+|+.||.+|.+..
T Consensus 356 --~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 356 --KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHT
T ss_pred --cCHHHHHHHHHHHHHHHHHHc
Confidence 457789999999999998764
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=5e-32 Score=277.73 Aligned_cols=298 Identities=17% Similarity=0.185 Sum_probs=196.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.+||+|||||+||++||..|+++|++ |+|||+++..... +... ..+|++.. .....+++..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~---Vtlie~~~~~GG~-------~~~~---~~~pg~~~------~~~~~~~~~~ 449 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYT---VHLTDTAEKIGGH-------LNQV---AALPGLGE------WSYHRDYRET 449 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSTTTT-------HHHH---TTSTTCGG------GHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCe-------eeec---ccCCChHH------HHHHHHHHHH
Confidence 57999999999999999999999986 9999998653211 0000 11121110 0011111111
Q ss_pred cCcEEE--cCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCccc-----ccCCCCCCCC--CCCeEEecCHHHHHHHH
Q 013914 85 KGIELI--LSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR-----LTDFGVEGAD--AKNIFYLREIDDADKLV 155 (434)
Q Consensus 85 ~~v~~~--~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~-----~~~~~~~g~~--~~~v~~~~~~~~~~~~~ 155 (434)
.++.+ .......+.. ++.+.+.++..+.||+||+|||+.|+. |..+.++|.+ ..++++. .++..
T Consensus 450 -~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~---~~~l~-- 522 (729)
T 1o94_A 450 -QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTP---EQVMD-- 522 (729)
T ss_dssp -HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECH---HHHHH--
T ss_pred -HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEH---HHHhc--
Confidence 01100 0011222222 233444455568899999999998532 2222367765 5567643 23221
Q ss_pred HHHHhCCCCcEEEEC--CCHHHHHHHHHHHhCCCeEEEEccCCccCCc-cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 156 EAIKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPR-LFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 156 ~~l~~~~~~~v~ViG--~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~-~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
. ....+++++||| +|++|+|+|..|.+.|.+|+++++.+ +++. .++.. ...+.+.+++.||++++++.++++.
T Consensus 523 ~--~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~ 598 (729)
T 1o94_A 523 G--KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIE 598 (729)
T ss_dssp C--CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred C--CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEE
Confidence 1 112467999999 99999999999999999999999988 5442 12222 4567788899999999999999997
Q ss_pred ecCCCcEEEEEe--CCC-cE------------------EECCEEEEcccCccChhhhhccccccCCcEEeCCCCCCCCCc
Q 013914 233 TNADGEVKEVKL--KDG-RT------------------LEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADD 291 (434)
Q Consensus 233 ~~~~g~v~~v~~--~~g-~~------------------~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~ 291 (434)
. ++ ..+.. .++ ++ +++|.||+|+|++|+++++.. +. ..+|+++||++|+
T Consensus 599 ~--~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~-l~-----~~vd~~~~t~~~~ 668 (729)
T 1o94_A 599 P--GR--MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNE-LK-----ARESEWAENDIKG 668 (729)
T ss_dssp T--TE--EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHH-HH-----HTGGGTGGGTCCE
T ss_pred C--Ce--EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHH-Hh-----hhcccccccCCCC
Confidence 5 33 12222 233 22 899999999999999987752 11 1268899999999
Q ss_pred EEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccCCCCcccCCCCCCeeEEeccCceeEEee
Q 013914 292 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYG 360 (434)
Q Consensus 292 iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 360 (434)
|||+|||+.. ..+..|..+|+.||.+|.+.. .+..+|+ ++..+++....+|
T Consensus 669 VyAiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l------~~~~~p~-~~~~~~~~~~~~~ 719 (729)
T 1o94_A 669 IYLIGDAEAP-----------RLIADATFTGHRVAREIEEAN------PQIAIPY-KRETIAWGTPHMP 719 (729)
T ss_dssp EEECGGGTSC-----------CCHHHHHHHHHHHHHTTTSSC------TTSCCCC-CCCCCCTTCCSST
T ss_pred eEEEeCccch-----------hhHHHHHHHHHHHHHHhhhhc------ccCCCCe-eeecccCcccccC
Confidence 9999999863 457789999999999998754 3445565 5666666554444
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=5.1e-32 Score=276.72 Aligned_cols=284 Identities=18% Similarity=0.171 Sum_probs=199.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||+|||||+||++||..|+++|++ |+|||+++..+.. +... ...+++... ..........+.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~---V~liE~~~~~GG~-------~~~~---~~~p~~~~~--~~~~~~~~~~~~ 454 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYD---VVLAEAGRDLGGR-------VTQE---SALPGLSAW--GRVKEYREAVLA 454 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSCTH-------HHHH---HTSTTCGGG--GHHHHHHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCE-------eeec---cCCCchhHH--HHHHHHHHHHHH
Confidence 458999999999999999999999987 9999998653311 0000 011111100 000012233444
Q ss_pred hc-CcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCccc-----ccCCCCCCCCCCCeEEecCHHHHHHHHHH
Q 013914 84 EK-GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR-----LTDFGVEGADAKNIFYLREIDDADKLVEA 157 (434)
Q Consensus 84 ~~-~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 157 (434)
+. +++++.++.+ ...+..++.||+||+|||+.|+. |..+.++|.+..++++. .+....
T Consensus 455 ~~~gv~~~~~~~v----------~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~---~~~l~~--- 518 (690)
T 3k30_A 455 ELPNVEIYRESPM----------TGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGP---DDLFAG--- 518 (690)
T ss_dssp TCTTEEEESSCCC----------CHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECH---HHHHTT---
T ss_pred HcCCCEEEECCee----------cHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcH---HHHhCC---
Confidence 55 7888887543 22334457899999999998542 11222677665555533 222211
Q ss_pred HHhCCCCcEEEEC--CCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013914 158 IKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 158 l~~~~~~~v~ViG--~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~ 235 (434)
....+++++||| +|++|+|+|..|.+.|.+|+++++.+.+++...++.....+.+.+++.||+++++++|++++.
T Consensus 519 -~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~-- 595 (690)
T 3k30_A 519 -RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA-- 595 (690)
T ss_dssp -CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET--
T ss_pred -CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC--
Confidence 112467899999 999999999999999999999999988877544466678888999999999999999999975
Q ss_pred CCcEEEEE---eCCCcEEECCEEEEcccCccChhhhhccccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceec
Q 013914 236 DGEVKEVK---LKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 312 (434)
Q Consensus 236 ~g~v~~v~---~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~ 312 (434)
++ ..+. ..+++++++|.||+|+|++|+++++..... .+. +|+.|+|||+|||+..
T Consensus 596 ~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~--~~~-------~t~~~~VyaiGD~~~~----------- 653 (690)
T 3k30_A 596 GG--VTVRDTYASIERELECDAVVMVTARLPREELYLDLVA--RRD-------AGEIASVRGIGDAWAP----------- 653 (690)
T ss_dssp TE--EEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH--HHH-------HTSCSEEEECGGGTSC-----------
T ss_pred Ce--EEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh--hhc-------ccCCCCEEEEeCCCch-----------
Confidence 33 2233 235568999999999999999987753111 111 7899999999999974
Q ss_pred ccHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 013914 313 EHVDHARKSAEQAVKTIMATEGGKTVTGYDY 343 (434)
Q Consensus 313 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~ 343 (434)
..+..|..||+.||.+|.+...++...+|..
T Consensus 654 ~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 654 GTIAAAVWSGRRAAEEFDAVLPSNDEVPFRR 684 (690)
T ss_dssp BCHHHHHHHHHHHHHHTTCCCCCTTSCSSCC
T ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCCCcCh
Confidence 3566699999999999999877765555554
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=1.1e-29 Score=247.39 Aligned_cols=287 Identities=11% Similarity=0.078 Sum_probs=191.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--CCCCccCc---------------cccC--------C
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--YERPALSK---------------AYLF--------P 57 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~--~~~~~~~~---------------~~~~--------~ 57 (434)
++.+||+|||||++|+++|..|++.|. ..+|+|||+++..+ |....... .+.. .
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 457899999999999999999999987 12399999986431 11100000 0000 0
Q ss_pred C----CCC-------CCCCcccccCCCCC-------CCChhhHhhcCcEEEcCCeeEEEECCCC--EEEccC---Cc---
Q 013914 58 E----GTA-------RLPGFHVCVGSGGE-------RLLPEWYKEKGIELILSTEIVRADIASK--TLLSAT---GL--- 111 (434)
Q Consensus 58 ~----~~~-------~~~~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~---~~--- 111 (434)
. ... .++++......... ..+.++.++.+..+..++.|+.++.... +|.+.+ |.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0 000 00000000000000 0112223334667888889999987665 455554 55
Q ss_pred EEEcceEEEecCC--CcccccCCCCCCCC------CCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHH
Q 013914 112 IFKYQILVIATGS--TVLRLTDFGVEGAD------AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALK 183 (434)
Q Consensus 112 ~~~~d~lvlAtG~--~~~~~~~~~~~g~~------~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~ 183 (434)
++.||+||+|||. .|+.|+ ++|.+ ...+++++++.+...+ .+++|+|||+|++|+|+|..|.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~---i~G~~~~~~~~~g~v~~~~~~~~~~~~-------~~k~VvVvG~G~sg~e~A~~l~ 232 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPN---IKGLDEYAKAVPGSVLHSSLFREPELF-------VGESVLVVGGASSANDLVRHLT 232 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCC---CBTHHHHHHHSTTSEEEGGGCCCGGGG-------TTCCEEEECSSHHHHHHHHHHT
T ss_pred EEEeCEEEECCCCCCCCCCCC---CCChhhhhccCCccEEEecccCChhhc-------CCCEEEEEccCcCHHHHHHHHH
Confidence 7999999999998 777776 46543 1346665544333221 5799999999999999999999
Q ss_pred hCCCe-EEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE-EECCEEEEcccC
Q 013914 184 INNID-VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT-LEADIVVVGVGG 261 (434)
Q Consensus 184 ~~g~~-v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~-~~~D~vi~a~G~ 261 (434)
+.+.+ |+++.+.+.+ +++.||.+ ...|+++.. ++ ..|.+.||++ +++|.||+|+|+
T Consensus 233 ~~~~~~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~--~~--~~v~~~dG~~~~~~D~vi~atG~ 290 (447)
T 2gv8_A 233 PVAKHPIYQSLLGGGD----------------IQNESLQQ--VPEITKFDP--TT--REIYLKGGKVLSNIDRVIYCTGY 290 (447)
T ss_dssp TTSCSSEEEECTTCCS----------------CBCSSEEE--ECCEEEEET--TT--TEEEETTTEEECCCSEEEECCCB
T ss_pred HHhCCcEEEEeCCCCc----------------CCCCCeEE--ecCeEEEec--CC--CEEEECCCCEeccCCEEEECCCC
Confidence 99999 9999988655 34567764 467888864 22 2578899976 689999999999
Q ss_pred ccChhh-----hhc-cccc-cCCcEEeCCCCC---CCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhc
Q 013914 262 RPLISL-----FKG-QVAE-NKGGIETDDFFK---TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 262 ~p~~~~-----~~~-~~~~-~~g~i~vd~~~~---t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 331 (434)
+|++++ ++. .... .++.+.++.+.+ +++|++|++||+... ..+..|..||+.+|+++.+
T Consensus 291 ~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~-----------~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 291 LYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV-----------VPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp CCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSS-----------CHHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccc-----------cCchHHHHHHHHHHHHHcC
Confidence 999988 543 1111 234455555555 589999999999764 3467788999999999987
Q ss_pred cC
Q 013914 332 TE 333 (434)
Q Consensus 332 ~~ 333 (434)
..
T Consensus 360 ~~ 361 (447)
T 2gv8_A 360 RL 361 (447)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.3e-29 Score=258.43 Aligned_cols=260 Identities=18% Similarity=0.217 Sum_probs=186.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+++||+|||||+||++||..|++.|++ |+|||+++..+.. ..+.. .+++..... .....+...++
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~---V~lie~~~~~gg~-~~~~~---------~~~~~~~~~--~~~~~~~~~~~ 436 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQ---VTLFDAHSEIGGQ-FNIAK---------QIPGKEEFY--ETLRYYRRMIE 436 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSSCTT-HHHHT---------TSTTCTTHH--HHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCe-eeccc---------cCCCHHHHH--HHHHHHHHHHH
Confidence 358999999999999999999998876 9999998754321 00000 111110000 00012334556
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEE-EcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCC
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIF-KYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~-~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~ 162 (434)
+.+++++.++.+.. ..+ .||+||+|||++|+.|+ ++|.+..++++.. +... . ....
T Consensus 437 ~~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~~~~---i~G~~~~~v~~~~---~~l~--~--~~~~ 493 (671)
T 1ps9_A 437 VTGVTLKLNHTVTA-------------DQLQAFDETILASGIVPRTPP---IDGIDHPKVLSYL---DVLR--D--KAPV 493 (671)
T ss_dssp HHTCEEEESCCCCS-------------SSSCCSSEEEECCCEEECCCC---CBTTTSTTEEEHH---HHHT--S--CCCC
T ss_pred HcCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcCCCC---CCCCCCCcEeeHH---HHhh--C--CCCC
Confidence 77999998865431 113 89999999999998877 5776656777542 2111 0 1125
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-------------------------------------eEEEEccCCccCCccCCH
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNI-------------------------------------DVSMVYPEPWCMPRLFTA 205 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~-------------------------------------~v~lv~~~~~~~~~~~~~ 205 (434)
+++++|||+|++|+|+|..|.+.|. +|+++++.+..+...+++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~ 573 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGK 573 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhcccccc
Confidence 7899999999999999999998773 566777766666555677
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCccChhhhhccccccCCcEEeCC
Q 013914 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDD 283 (434)
Q Consensus 206 ~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~ 283 (434)
.....+.+.+++.||++++++++++++. ++ ..++ .+| +++++|.||+|+|++||+++++..
T Consensus 574 ~~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~--v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l------------ 636 (671)
T 1ps9_A 574 TTGWIHRTTLLSRGVKMIPGVSYQKIDD--DG--LHVV-INGETQVLAVDNVVICAGQEPNRALAQPL------------ 636 (671)
T ss_dssp TTHHHHHHHHHHTTCEEECSCEEEEEET--TE--EEEE-ETTEEEEECCSEEEECCCEEECCTTHHHH------------
T ss_pred ccHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce--EEEe-cCCeEEEEeCCEEEECCCccccHHHHHHH------------
Confidence 7778888999999999999999999974 33 2232 577 579999999999999999876521
Q ss_pred CCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHH
Q 013914 284 FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTI 329 (434)
Q Consensus 284 ~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 329 (434)
+...++||++|||+.... ..+..|++||..+|.||
T Consensus 637 --~~~g~~v~aiGD~~~~~~---------~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 --IDSGKTVHLIGGCDVAME---------LDARRAIAQGTRLALEI 671 (671)
T ss_dssp --HTTTCCEEECGGGTCCSS---------CCHHHHHHHHHHHHHHC
T ss_pred --HhcCCCEEEECCcCccCc---------hhHHHHHHHHHHHHHhC
Confidence 122478999999998643 35888999999999885
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=1.1e-28 Score=244.20 Aligned_cols=297 Identities=16% Similarity=0.220 Sum_probs=187.5
Q ss_pred CCcEEEECCCHHHHHHHHHHH-HcCCCCCcEEEEeCCCCCC-------CCCCc--c-CccccCCCCCC--CCCCccc--c
Q 013914 5 SFKYVILGGGVSAGYAAREFA-KQGVKPGELAIISKEAVAP-------YERPA--L-SKAYLFPEGTA--RLPGFHV--C 69 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~-~~g~~~~~V~vie~~~~~~-------~~~~~--~-~~~~~~~~~~~--~~~~~~~--~ 69 (434)
++||+|||||++|+++|..|+ +.|.+ |+|||+++..+ |..+. . +..+....... ..+.+.. .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~---v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 84 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLT---TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYI 84 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCC
Confidence 589999999999999999999 88876 99999976432 11100 0 00000000000 0000000 0
Q ss_pred cCCCCCCCChhhHhhcCc--EEEcCCeeEEEECCCC----EEEccCCcEEEcceEEEecC--CCcccccCCCCCCCCC--
Q 013914 70 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADA-- 139 (434)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~-- 139 (434)
........+....++.++ ++..++.|+.++.+.+ +|.+.+|+++.||+||+||| +.|+.|++ +|.+.
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i---pG~~~f~ 161 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNL---PGLDTFE 161 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCC---TTGGGCC
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCC---CCccccC
Confidence 000001122344556677 7888889999987766 67888888899999999999 68888774 55431
Q ss_pred CCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc-CCc---cCCHHHHHHHH---
Q 013914 140 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-MPR---LFTADIAAFYE--- 212 (434)
Q Consensus 140 ~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~-~~~---~~~~~~~~~~~--- 212 (434)
..+++.....+. ....+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+ ++. .+.+...+.++
T Consensus 162 g~~~~~~~~~~~-------~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~ 234 (540)
T 3gwf_A 162 GETIHTAAWPEG-------KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADY 234 (540)
T ss_dssp SEEEEGGGCCSS-------CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTH
T ss_pred CCEEEeecCCCc-------cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhcc
Confidence 223332221111 0125799999999999999999999999999999999883 322 12222222111
Q ss_pred ----------------------------------------------------------------------HH--------
Q 013914 213 ----------------------------------------------------------------------GY-------- 214 (434)
Q Consensus 213 ----------------------------------------------------------------------~~-------- 214 (434)
+.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp 314 (540)
T 3gwf_A 235 DRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDP 314 (540)
T ss_dssp HHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCH
Confidence 00
Q ss_pred -------------------------HHhcCcEEEc--CCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh
Q 013914 215 -------------------------YANKGIKIIK--GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL 267 (434)
Q Consensus 215 -------------------------l~~~GV~~~~--~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~ 267 (434)
+.+.+|+++. ...|++++. .+|.++||+++++|.||+|||+++++..
T Consensus 315 ~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~------~gv~~~dG~~~~~DvIV~ATGf~~~~~~ 388 (540)
T 3gwf_A 315 ETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA------KGVVTEDGVLHELDVLVFATGFDAVDGN 388 (540)
T ss_dssp HHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS------SEEEETTCCEEECSEEEECCCBSCSSHH
T ss_pred HHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec------CeEEcCCCCEEECCEEEECCccCccccC
Confidence 1144788875 678888865 3588999999999999999999998854
Q ss_pred hhc-cccccCCcEEeCC--------C--CCC-CCCcEEEe-cccccccccccCcceecccHHHHHHHHHHHHHHHhc
Q 013914 268 FKG-QVAENKGGIETDD--------F--FKT-SADDVYAV-GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 268 ~~~-~~~~~~g~i~vd~--------~--~~t-~~~~iya~-GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 331 (434)
+.. .+. ..+++.+++ + +.+ +.||+|.+ |..+. .. .....+..|++.+++.|..
T Consensus 389 ~~~~~i~-g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~--~~--------s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 389 YRRIEIR-GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP--FT--------NLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp HHTSEEE-CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB--CS--------CHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEE-CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC--Cc--------cHHHHHHHHHHHHHHHHHH
Confidence 422 211 122233332 2 233 78999999 76654 11 2345667788888877653
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=1.2e-26 Score=230.02 Aligned_cols=182 Identities=16% Similarity=0.208 Sum_probs=119.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCC--cc-CccccCCCCCC--CCCCccc--c
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERP--AL-SKAYLFPEGTA--RLPGFHV--C 69 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~~--~~-~~~~~~~~~~~--~~~~~~~--~ 69 (434)
.++||||||||++|+++|..|++.|.+ |+|||+++..+ |..+ .. +..+....... ..+.+.. .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~ 96 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYA 96 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCC
Confidence 357999999999999999999999886 99999976432 1110 00 00000000000 0000000 0
Q ss_pred cCCCCCCCChhhHhhcCc--EEEcCCeeEEEECCCC----EEEccCCcEEEcceEEEecC--CCcccccCCCCCCCCC--
Q 013914 70 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADA-- 139 (434)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~-- 139 (434)
........+....++.++ ++..++.|+.++.+.+ +|.+.+|+++.||+||+||| +.|+.|++ +|.+.
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i---pG~~~f~ 173 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAF---DGLDRFT 173 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCC---TTGGGCC
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCC---CCcccCC
Confidence 000001122334456676 7888899999987766 68888888999999999999 78888874 55431
Q ss_pred CCeEEecCHH-HHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 140 KNIFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 140 ~~v~~~~~~~-~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..+++..... +... ..+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+
T Consensus 174 g~~~~~~~~~~~~~~-------~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 174 GDIVHTARWPHDGVD-------FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp SEEEEGGGCCTTCCC-------CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CceEEeccccccccc-------cCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 2233332211 1111 15799999999999999999999999999999999874
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=4.9e-27 Score=232.53 Aligned_cols=191 Identities=15% Similarity=0.114 Sum_probs=115.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCC--CccCccccCCC-CCCCCCCccccc---
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YER--PALSKAYLFPE-GTARLPGFHVCV--- 70 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~--~~~~~~~~~~~-~~~~~~~~~~~~--- 70 (434)
+++||||||||++|+++|..|++.|.+ |+|||+++..+ |.. +......+... .......+.+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~ 84 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFA 84 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCC
Confidence 458999999999999999999999886 99999986432 110 00000000000 000000000000
Q ss_pred -CCCCCCCChhhHhhcCc--EEEcCCeeEEEECCCC----EEEccCCcEEEcceEEEecC--CCcccccCCCCCCCCCCC
Q 013914 71 -GSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADAKN 141 (434)
Q Consensus 71 -~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~~~ 141 (434)
............++.++ ++..++.|+.++.+.. .|.+.+|+++.||+||+||| +.|+.|++++++......
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGES 164 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCe
Confidence 00001122333445566 7888889999987665 68888888999999999999 788888743332222112
Q ss_pred eEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 142 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 142 v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
+++.....+.....+ .....+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+
T Consensus 165 ~h~~~~~~~~~~~~~-~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 165 FHSSRWPTDAEGAPK-GVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp EEGGGCCBCTTSCBS-CCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred EEccccccccccccc-ccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 222211111000000 00115789999999999999999999999999999999874
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=3.1e-25 Score=220.67 Aligned_cols=295 Identities=14% Similarity=0.182 Sum_probs=180.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC-------CCCCccCccccCCCCCCCCC---C----cccc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP-------YERPALSKAYLFPEGTARLP---G----FHVC 69 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~----~~~~ 69 (434)
..+||+|||||++|+++|..|++.|++ |+|||+++..+ |.... ...+.....+. . +.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GG~w~~~~~pg~~----~d~~~~~~~~~f~~~~~~~~~~~ 87 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRS---VHVIETAGDVGGVWYWNRYPGAR----CDIESIEYCYSFSEEVLQEWNWT 87 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCB----CSSCTTTSSCCSCHHHHHHCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccccCCCcee----ecccccccccccChhhhhccCcc
Confidence 458999999999999999999999986 99999986532 11100 00000000000 0 0000
Q ss_pred cCC----CCCCCChhhHhhcC--cEEEcCCeeEEEECCCC----EEEccCCcEEEcceEEEecC--CCcccccCCCCCCC
Q 013914 70 VGS----GGERLLPEWYKEKG--IELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGA 137 (434)
Q Consensus 70 ~~~----~~~~~~~~~~~~~~--v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~ 137 (434)
... .....+....++.+ .++..+++|.+++.+.. +|.+.+|+++.+|+||+||| +.|+.|+ ++|.
T Consensus 88 ~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~---i~G~ 164 (542)
T 1w4x_A 88 ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPN---FPGL 164 (542)
T ss_dssp BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCC---CTTG
T ss_pred cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCC---CCCc
Confidence 000 00011112233444 56888889999876543 56777888899999999999 5677776 4554
Q ss_pred C-CCC-eEEecCHH-HHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-Cc---cCCHHHHH-
Q 013914 138 D-AKN-IFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-PR---LFTADIAA- 209 (434)
Q Consensus 138 ~-~~~-v~~~~~~~-~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~-~~---~~~~~~~~- 209 (434)
+ ..+ +++..... +.. ...+++++|||+|.+|+|++..+.+.+.+|+++.+.+.+. +. .+.++..+
T Consensus 165 ~~f~G~~~hs~~~~~~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~ 237 (542)
T 1w4x_A 165 KDFAGNLYHTGNWPHEPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLAD 237 (542)
T ss_dssp GGCCSEEEEGGGCCSSCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHH
T ss_pred ccCCCceEECCCCCCchh-------ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHH
Confidence 3 122 23222111 100 1257999999999999999999999999999999887652 21 01111110
Q ss_pred ----------------------------------------------------------------------HHHHHH----
Q 013914 210 ----------------------------------------------------------------------FYEGYY---- 215 (434)
Q Consensus 210 ----------------------------------------------------------------------~~~~~l---- 215 (434)
.+.+.+
T Consensus 238 ~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (542)
T 1w4x_A 238 LKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTV 317 (542)
T ss_dssp HHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHc
Confidence 011111
Q ss_pred -------------------------------HhcCcEEE--cCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 216 -------------------------------ANKGIKII--KGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 216 -------------------------------~~~GV~~~--~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
.+.+|+++ .+..|++++. .+|.++| +++++|.||+|||++
T Consensus 318 ~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~------~gv~~~d-~~~~~D~ii~atG~~ 390 (542)
T 1w4x_A 318 RDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP------RGVRTSE-REYELDSLVLATGFD 390 (542)
T ss_dssp SSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS------SEEEESS-CEEECSEEEECCCCC
T ss_pred CCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC------CeEEeCC-eEEecCEEEEcCCcc
Confidence 11246665 3566777754 3578888 899999999999999
Q ss_pred cChhhhhc-cccccCCcEEeCCC----------CCC-CCCcEEEe-cccccccccccCcceecccH-HHHHHHHHHHHHH
Q 013914 263 PLISLFKG-QVAENKGGIETDDF----------FKT-SADDVYAV-GDVATFPMKLYREMRRVEHV-DHARKSAEQAVKT 328 (434)
Q Consensus 263 p~~~~~~~-~~~~~~g~i~vd~~----------~~t-~~~~iya~-GD~~~~~~~~~~~~~~~~~~-~~A~~~g~~aa~~ 328 (434)
+++.++.. .+.-. +++.+++. +.+ +.||+|++ |+.+.... +++ ..+..|++.++++
T Consensus 391 ~~~~~~~~~~i~g~-~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~---------~~~~~~~e~q~~~ia~~ 460 (542)
T 1w4x_A 391 ALTGALFKIDIRGV-GNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSAL---------SNMLVSIEQHVEWVTDH 460 (542)
T ss_dssp CTTHHHHTSEEECG-GGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGG---------SCHHHHHHHHHHHHHHH
T ss_pred ccccCcCceeeECC-CCCCHHHhhcCchheecccccCCCCceEEEcCCCCCccc---------ccHHHHHHHHHHHHHHH
Confidence 98776543 22223 34444432 222 56777776 77653211 344 7788999999999
Q ss_pred Hhcc
Q 013914 329 IMAT 332 (434)
Q Consensus 329 i~~~ 332 (434)
|...
T Consensus 461 i~~~ 464 (542)
T 1w4x_A 461 IAYM 464 (542)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.91 E-value=2.9e-23 Score=176.37 Aligned_cols=158 Identities=19% Similarity=0.163 Sum_probs=131.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc--------cC-----CHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR--------LF-----TADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~--------~~-----~~~~~~~~~~~l~~~GV~~~~~~~v~~i 231 (434)
+++|||+|++|+++|..|.+.|.+|+++++.+..+.+ .+ ++++.+.+.+.+++.||+++++ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998766531 12 4788999999999999999999 99999
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhccccccCCcEEeCCCCCCCCCcEEEecccccccccccCccee
Q 013914 232 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 311 (434)
Q Consensus 232 ~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~ 311 (434)
+.++++ ..+++++| ++++|.||+|+|.+|+. .-..++..++|.|.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~~-~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~-------- 149 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPTL-PSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP-------- 149 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCHH-HHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS--------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCCc-cccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch--------
Confidence 874333 56788888 89999999999999854 1123454557889999999999999999999998753
Q ss_pred cccHHHHHHHHHHHHHHHhccCCCC
Q 013914 312 VEHVDHARKSAEQAVKTIMATEGGK 336 (434)
Q Consensus 312 ~~~~~~A~~~g~~aa~~i~~~~~~~ 336 (434)
+++..|..+|+.||.||.+...+.
T Consensus 150 -~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 150 -GHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -hhHHHHHHhHHHHHHHHHHHhhhc
Confidence 367889999999999999865443
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.83 E-value=6.4e-19 Score=173.16 Aligned_cols=288 Identities=13% Similarity=0.086 Sum_probs=163.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCC-----------CCcEEEEeCCCCCCCCCCccCccc-c---------CCCCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVK-----------PGELAIISKEAVAPYERPALSKAY-L---------FPEGTARL 63 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~-----------~~~V~vie~~~~~~~~~~~~~~~~-~---------~~~~~~~~ 63 (434)
.|||||||+||+||++|..|.+.+.+ ....+.+|+.+.+.|...++..+. + ....+...
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~ 118 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSS 118 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCc
Confidence 48999999999999999999886532 123678899877666543321111 0 00000000
Q ss_pred CCc-----------ccccCCC------CCCCChhh-HhhcCcEEEcCCeeEEEECCC----------CEEEccCC-----
Q 013914 64 PGF-----------HVCVGSG------GERLLPEW-YKEKGIELILSTEIVRADIAS----------KTLLSATG----- 110 (434)
Q Consensus 64 ~~~-----------~~~~~~~------~~~~~~~~-~~~~~v~~~~~~~v~~i~~~~----------~~v~~~~~----- 110 (434)
-.| .+..-.. +...+.++ .++.+..+.++++|+++.+.. -+|++.++
T Consensus 119 ~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~ 198 (501)
T 4b63_A 119 FTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEI 198 (501)
T ss_dssp TSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCE
T ss_pred cchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceE
Confidence 000 0000000 00111122 233456688888999886532 13444332
Q ss_pred cEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHH--HhCCCCcEEEECCCHHHHHHHHHHHhC--C
Q 013914 111 LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI--KAKKNGKAVVVGGGYIGLELSAALKIN--N 186 (434)
Q Consensus 111 ~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l--~~~~~~~v~ViG~g~~~~e~a~~l~~~--g 186 (434)
.++.++.||+|||..|..|.. ... ...+++.....+.. +.+ ....+|+|+|||+|.+|+|++..|.+. +
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~---~~~-~g~v~Hss~y~~~~---~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~ 271 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSG---LPQ-DPRIIHSSKYCTTL---PALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPN 271 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTT---SCC-CTTEEEGGGHHHHH---HHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTT
T ss_pred EEEEeCEEEECcCCCCCCCCC---CCC-Ccceeeccccccch---hhccccccCCcEEEEECCcHHHHHHHHHHHhcCCC
Confidence 368899999999998887764 332 24577655543321 111 123689999999999999999999864 7
Q ss_pred CeEEEEccCCccCCc--------cCCHHH-------------------------------HHHHHHHH-Hh---------
Q 013914 187 IDVSMVYPEPWCMPR--------LFTADI-------------------------------AAFYEGYY-AN--------- 217 (434)
Q Consensus 187 ~~v~lv~~~~~~~~~--------~~~~~~-------------------------------~~~~~~~l-~~--------- 217 (434)
.+|+++.|.+.+.+. .+.++. .+.+.+.+ ++
T Consensus 272 ~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~ 351 (501)
T 4b63_A 272 SRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQ 351 (501)
T ss_dssp CEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGG
T ss_pred ceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccc
Confidence 899999998765432 111111 11111111 10
Q ss_pred cCcEEEcCCeEEEEEecCC-CcE-----------EEEEeCCCcEEECCEEEEcccCccChh--hhhc--cccc-cCCcEE
Q 013914 218 KGIKIIKGTVAVGFTTNAD-GEV-----------KEVKLKDGRTLEADIVVVGVGGRPLIS--LFKG--QVAE-NKGGIE 280 (434)
Q Consensus 218 ~GV~~~~~~~v~~i~~~~~-g~v-----------~~v~~~~g~~~~~D~vi~a~G~~p~~~--~~~~--~~~~-~~g~i~ 280 (434)
....+..+..+..+..... +++ .++.+.+|+++++|.||+|||++|+.. ++.. .+.. .+|.+.
T Consensus 352 ~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~ 431 (501)
T 4b63_A 352 WQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWK 431 (501)
T ss_dssp CSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCC
T ss_pred cceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCee
Confidence 1124555555555543221 111 234567889999999999999998764 2221 2222 567788
Q ss_pred eCCCCCC--------CCCcEEEecccc
Q 013914 281 TDDFFKT--------SADDVYAVGDVA 299 (434)
Q Consensus 281 vd~~~~t--------~~~~iya~GD~~ 299 (434)
|+..++. ..++||+.|-+-
T Consensus 432 v~rdy~~~~~~~~~~~~~~i~~qg~~~ 458 (501)
T 4b63_A 432 PHRDYRVEMDPSKVSSEAGIWLQGCNE 458 (501)
T ss_dssp BCTTSBBCCCTTTBCTTCEEEECSCCH
T ss_pred eCCCcEEeecCCccCCCceEEecCCCc
Confidence 8876553 246799999543
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.75 E-value=4e-20 Score=180.34 Aligned_cols=220 Identities=12% Similarity=0.063 Sum_probs=127.3
Q ss_pred HhhcCcEEEcCCeeEEEECCCCEE---Ecc-CCcEEEcceEEEecCCCcccccCCCC-CCCCCCCeEEecCHHHHHHHHH
Q 013914 82 YKEKGIELILSTEIVRADIASKTL---LSA-TGLIFKYQILVIATGSTVLRLTDFGV-EGADAKNIFYLREIDDADKLVE 156 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~~~v---~~~-~~~~~~~d~lvlAtG~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~ 156 (434)
+++.|++++.++.+ .+..+...+ ... ++.++.+|.+|+|||+.+..++...- ++... +....+.+.-.
T Consensus 129 ~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tG------dgi~~a~~aGa 201 (472)
T 2e5v_A 129 AREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIG------DGMAIAFKAGT 201 (472)
T ss_dssp HHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSCTTCSC------HHHHHHHHTTC
T ss_pred HHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCCCCCch------HHHHHHHHcCC
Confidence 34579999999889 887666543 322 23357899999999998876553110 11111 00000100000
Q ss_pred HHHhC---CC-CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHH--------HHHHHHHHHHhcCcEEEc
Q 013914 157 AIKAK---KN-GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD--------IAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 157 ~l~~~---~~-~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~--------~~~~~~~~l~~~GV~~~~ 224 (434)
.+... .. ...+++|+| +++++..+...|..+ +..+.++++++ ++++ +.+.+.+.+++.|. +++
T Consensus 202 ~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~l 276 (472)
T 2e5v_A 202 ILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFI 276 (472)
T ss_dssp CEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEE
T ss_pred CEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEE
Confidence 00000 01 123445666 888888888899887 78888888865 3433 25666677776663 332
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEE-CCEEEEcccCccChhhhhcc--ccccCCcEEeCCCCCCCCCcEEEeccccc-
Q 013914 225 GTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGGRPLISLFKGQ--VAENKGGIETDDFFKTSADDVYAVGDVAT- 300 (434)
Q Consensus 225 ~~~v~~i~~~~~g~v~~v~~~~g~~~~-~D~vi~a~G~~p~~~~~~~~--~~~~~g~i~vd~~~~t~~~~iya~GD~~~- 300 (434)
+... + +. +. +.++ .+.++++.|..|+ ++++.. .....|+|.||+++||++|+|||+|||+.
T Consensus 277 d~~~--~----~~------~~--~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~ 341 (472)
T 2e5v_A 277 DLSK--I----ED------FE--RKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDS 341 (472)
T ss_dssp ECTT--C----TT------HH--HHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEEC
T ss_pred eccc--h----HH------HH--HHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccc
Confidence 2210 0 00 00 1232 3667788899998 655432 11257999999999999999999999998
Q ss_pred ccccccCccee-cccHHHHHHHHHHHHHHHhc
Q 013914 301 FPMKLYREMRR-VEHVDHARKSAEQAVKTIMA 331 (434)
Q Consensus 301 ~~~~~~~~~~~-~~~~~~A~~~g~~aa~~i~~ 331 (434)
... +..+. ......+.-.|+.|++++.+
T Consensus 342 ~~h---g~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 342 GLH---GANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp SSS---TTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred ccC---CCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 322 21111 02234444556666666544
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.64 E-value=1e-15 Score=134.92 Aligned_cols=156 Identities=15% Similarity=0.145 Sum_probs=111.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------------cCCcc------CCHHHHHHHHHHHHhc-C
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------------CMPRL------FTADIAAFYEGYYANK-G 219 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-----------------~~~~~------~~~~~~~~~~~~l~~~-G 219 (434)
..++|||+|+.|+++|..|++.|.+|+++++... +...+ ....+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999998621 11100 1136677888888887 9
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh--------------------hhh----hcccccc
Q 013914 220 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI--------------------SLF----KGQVAEN 275 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~--------------------~~~----~~~~~~~ 275 (434)
++++ +++|+++.. +++.+..+.+.+|+++++|.||+|+|..++. .+. +.++...
T Consensus 84 v~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9999 568999986 3556667888899889999999999984332 221 1122221
Q ss_pred CCc----------------EEeCC------C-CCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhcc
Q 013914 276 KGG----------------IETDD------F-FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 276 ~g~----------------i~vd~------~-~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 332 (434)
.+. ..+.. . .+|++|+|||+|||+ .. ..+..|..||+.+|.+|...
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~----------g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE----------GDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC----------ccHHHHHHHHHHHHHHHHhh
Confidence 100 01110 1 126899999999999 43 35677889999999999764
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.60 E-value=1.3e-16 Score=152.15 Aligned_cols=121 Identities=17% Similarity=0.274 Sum_probs=73.8
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCccCc------cccCCCCCCCCC---
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALSK------AYLFPEGTARLP--- 64 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~-------~~~~~~~------~~~~~~~~~~~~--- 64 (434)
|| +++||+|||||++|+++|..|+++|.+ |+|+|+++.... .++.+.. .++.. ......
T Consensus 1 MM-~~~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~-~~~~~~~~l 75 (401)
T 2gqf_A 1 MS-QYSENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQ-NPHFVKSAL 75 (401)
T ss_dssp CE-EECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECS-CTTSTHHHH
T ss_pred CC-CCCCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccC-CHHHHHHHH
Confidence 54 469999999999999999999999987 999999875310 1111110 00000 000000
Q ss_pred ---------------Cccccc---C--------CCCCCCChhhHhhcCcEEEcCCeeEEEECC----CC--EEEccCCcE
Q 013914 65 ---------------GFHVCV---G--------SGGERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGLI 112 (434)
Q Consensus 65 ---------------~~~~~~---~--------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~~ 112 (434)
+..... + ......+.+.+++.|++++.++.++.+..+ .. .+.+.++ +
T Consensus 76 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~ 154 (401)
T 2gqf_A 76 ARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-Q 154 (401)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-E
T ss_pred HhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-E
Confidence 000000 0 000011233445679999999999988755 33 3444454 7
Q ss_pred EEcceEEEecCCCcc
Q 013914 113 FKYQILVIATGSTVL 127 (434)
Q Consensus 113 ~~~d~lvlAtG~~~~ 127 (434)
+++|++|+|||+.+.
T Consensus 155 i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 155 WQCKNLIVATGGLSM 169 (401)
T ss_dssp EEESEEEECCCCSSC
T ss_pred EECCEEEECCCCccC
Confidence 999999999998874
No 98
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.58 E-value=5.4e-18 Score=157.79 Aligned_cols=254 Identities=13% Similarity=0.005 Sum_probs=141.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
.+||+|||||||||+||.+|+++ |++ |+|||+++.++.. + +... +.++... ........+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~~~~GG~--~-----~~~~--~~~~~~~------l~~~~~~~~ 126 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGG--S-----WLGG--QLFSAMV------MRKPAHLFL 126 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTT--T-----TCCS--TTCCCEE------EETTTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECCCCCCce--E-----EeCC--ccCCHHH------HHHHHHHHH
Confidence 47999999999999999999754 777 9999998653311 0 1110 1111110 012345566
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCC---CCCeEEecCHHHHHHHHHHHH
Q 013914 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAIK 159 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~l~ 159 (434)
++.|+++..... .....+..+++++..++.++. +|.. ...+..+......
T Consensus 127 ~e~Gv~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~-------- 179 (326)
T 3fpz_A 127 QELEIPYEDEGD----------------YVVVKHAALFISTVLSKVLQL---PNVKLFNATCVEDLVTRPPT-------- 179 (326)
T ss_dssp HHTTCCCEECSS----------------EEEESCHHHHHHHHHHHHHTS---TTEEEETTEEEEEEEEESSC--------
T ss_pred HHcCCEEEECCc----------------ceecceeEEEEcchhhhcccc---ccceeecccccceeeccCCc--------
Confidence 777877655321 123344455566655554442 3322 1111111111100
Q ss_pred hCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcE
Q 013914 160 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEV 239 (434)
Q Consensus 160 ~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v 239 (434)
....++++++|+|.++++.|..+...+.++++..+........ . +.. ... .+..... .++..
T Consensus 180 ~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~-~----------~~~-~~~-----~~~~~~g-~~~~~ 241 (326)
T 3fpz_A 180 EKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTR-D----------LSQ-KHG-----VILSTTG-HDGPF 241 (326)
T ss_dssp SSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSB-C----------TTS-CCC-----EEEECCC-SCSSS
T ss_pred ccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccc-c----------cee-ecc-----eEEEEec-ceeeE
Confidence 1147899999999999999999999999999987654433210 0 000 000 0111111 01100
Q ss_pred EEEEeCCCcEEECCEEEEcccCccChhhhhccccccCCcEEeCCCCCCCCCcEEEecccccccccccCcceecccHHHHH
Q 013914 240 KEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHAR 319 (434)
Q Consensus 240 ~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~ 319 (434)
. .......+.+|.+..+.|.+|..... ..+.|.+|+.++|++|+|||+||++....... +--+....++
T Consensus 242 ~--~~~~~~~~~~~~~~~~~g~~~~~~~~------~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~---rmGp~~g~mi 310 (326)
T 3fpz_A 242 G--AFCAKRIVDIDQNQKLGGMKGLDMNH------AEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN---RMGPTFGAMA 310 (326)
T ss_dssp C--SHHHHHHHHHCTTCCCCCCCCBCHHH------HHHHHHHHCEECTTSBTEEECTHHHHHHHTCC---BCCSCCHHHH
T ss_pred e--ecceeEEEecCceeeecceecccccc------cCCeEEECCCeEECCCCEEEEchHhccccCCC---cCchHHHHHH
Confidence 0 00001134566667777777643322 22567778889999999999999986432211 0002233455
Q ss_pred HHHHHHHHHHhcc
Q 013914 320 KSAEQAVKTIMAT 332 (434)
Q Consensus 320 ~~g~~aa~~i~~~ 332 (434)
..|+.||+.|...
T Consensus 311 ~SG~~AAe~I~~~ 323 (326)
T 3fpz_A 311 LSGVHAAEQILKH 323 (326)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6899999988753
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.37 E-value=3e-13 Score=130.74 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=72.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--------CccChhhhhc-ccc-
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--------GRPLISLFKG-QVA- 273 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G--------~~p~~~~~~~-~~~- 273 (434)
+..+...+...+++.| +++++++|++|+.++++ ..|++.+|+++++|.||+|+| +.|+.+.... .+.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~ 279 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV--VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE 279 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS--EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe--EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh
Confidence 4445666677777788 99999999999874444 468888998899999999999 8888765422 111
Q ss_pred -ccCCcEEeCCCCCCCCCcEEEeccccc
Q 013914 274 -ENKGGIETDDFFKTSADDVYAVGDVAT 300 (434)
Q Consensus 274 -~~~g~i~vd~~~~t~~~~iya~GD~~~ 300 (434)
.....+.|+..++++.+++|+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 134569999999999999999999843
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.34 E-value=1.1e-11 Score=122.70 Aligned_cols=158 Identities=16% Similarity=0.232 Sum_probs=93.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC-CCCCCCCccCccccCCC----CCCCCCC------------c
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA-VAPYERPALSKAYLFPE----GTARLPG------------F 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~~~~----~~~~~~~------------~ 66 (434)
..+||||||||+||++||..|++.|.+ |+|||++. ..+...|..+.+..... ....+.+ +
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQ---TLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCC---EEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 458999999999999999999999987 99999974 22222222221111000 0000000 0
Q ss_pred ccc---cCCC------------CCCCChhhHhh-cCcEEEcCCeeEEEECCCC---EEEccCCcEEEcceEEEecCCCcc
Q 013914 67 HVC---VGSG------------GERLLPEWYKE-KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 67 ~~~---~~~~------------~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~~~~ 127 (434)
... .+.. ....+.+.+++ .|++++. ..|+.+..++. .|.+.+|.++.+|.+|+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~-~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQ-QAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEE-EEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 000 0000 00112233444 5899965 58998876554 356667878999999999999887
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEc
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 193 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~ 193 (434)
.+. ++|... + .+.+ +| +.++++++..|.+.|.+|+.+.
T Consensus 183 ~~~---i~G~~~---~------------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 GKI---HIGLDN---Y------------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp CEE---ECC--------------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred Ccc---ccCccc---C------------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 665 344321 0 1223 46 7889999999999999998875
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.31 E-value=5e-12 Score=114.82 Aligned_cols=168 Identities=15% Similarity=0.108 Sum_probs=115.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEccCCccCCcc-------------------------------------CC
Q 013914 163 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRL-------------------------------------FT 204 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~-g~~v~lv~~~~~~~~~~-------------------------------------~~ 204 (434)
...++|||+|++|+.+|..|++. |.+|+++++.+.+.... ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 35799999999999999999997 99999999886542100 12
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeC---------CC-----cEEECCEEEEcccCccChhhh-
Q 013914 205 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLK---------DG-----RTLEADIVVVGVGGRPLISLF- 268 (434)
Q Consensus 205 ~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g~v~~v~~~---------~g-----~~~~~D~vi~a~G~~p~~~~~- 268 (434)
.++...+.+.+.+ .||+++++++|.++.. +++++..+.+. +| .++++|.||+|+|..++....
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 3455566666655 7999999999999986 34555566552 32 579999999999987764321
Q ss_pred -----hcc--ccc-cCCcEEeCC-------CCCCCCCcEEEecccccccccccCcceecccHHHHHHHHHHHHHHHhccC
Q 013914 269 -----KGQ--VAE-NKGGIETDD-------FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 333 (434)
Q Consensus 269 -----~~~--~~~-~~g~i~vd~-------~~~t~~~~iya~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 333 (434)
..+ ... ...++.+|. ..+++.|++|++||++... .+.++..+.+..+..+|+.+|.++...+
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 111 111 122343332 3456779999999987532 2223333567778899999999998765
Q ss_pred C
Q 013914 334 G 334 (434)
Q Consensus 334 ~ 334 (434)
.
T Consensus 275 ~ 275 (284)
T 1rp0_A 275 G 275 (284)
T ss_dssp T
T ss_pred h
Confidence 3
No 102
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.25 E-value=8e-11 Score=116.19 Aligned_cols=158 Identities=17% Similarity=0.201 Sum_probs=94.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC-CCCCCCCccCccccCCC----CCCCCCC----------ccc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA-VAPYERPALSKAYLFPE----GTARLPG----------FHV 68 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~~~~----~~~~~~~----------~~~ 68 (434)
..+||||||||+||++||..|++.|.+ |+|||++. ..+...|..+.+..... ....+.+ ..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAK---TAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 358999999999999999999999987 99999974 22222222211110000 0000000 000
Q ss_pred c-----cCCC------------CCCCChhhHhh-cCcEEEcCCeeEEEECCCCE---EEccCCcEEEcceEEEecCCCcc
Q 013914 69 C-----VGSG------------GERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 69 ~-----~~~~------------~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~ 127 (434)
. .+.. ....+.+.+++ .|++++. ..|+.+..++.. |.+.+|.++.++.+|+|||+.+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~-~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQ-EEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-SCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEE-eEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 0 0000 00112233444 4899965 589988765553 56678888999999999999877
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEc
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 193 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~ 193 (434)
.+. ++|.. .+ .+.+ + |+.++.+++..|.+.|.++..+.
T Consensus 182 ~~~---~~G~~---~~------------------~~Gr---~-G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 182 GVI---YIGDK---MI------------------PGGR---L-GEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp CEE---EETTE---EE------------------ECSB---T-TBCCBCTHHHHHHHTTCCCEEEE
T ss_pred Cce---eccce---ec------------------CCCC---C-CchhHHHHHHHHHhcCCceEEec
Confidence 655 34432 11 1222 2 35677889999999988776654
No 103
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.25 E-value=9.7e-11 Score=110.47 Aligned_cols=58 Identities=16% Similarity=0.262 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g--~~~~~D~vi~a~G~~ 262 (434)
+..+.+.+.+.+++.|++++++++|+++..++++. ..+.+.+| .++.+|.||+|+|..
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGG-FELDFGGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSS-EEEEECTTSCEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCce-EEEEECCCceeEEEeCEEEECCCcc
Confidence 46788889999999999999999999998844443 35788888 489999999999965
No 104
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.25 E-value=2.8e-10 Score=108.30 Aligned_cols=38 Identities=32% Similarity=0.481 Sum_probs=34.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
|++|||+||||||||+++|..|+++|++ |+|+|+.+..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~---V~v~Er~~~~ 39 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 3569999999999999999999999998 9999998653
No 105
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.19 E-value=2.5e-11 Score=102.30 Aligned_cols=110 Identities=18% Similarity=0.183 Sum_probs=74.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccc-cCCCCCCCChhhHhh
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVC-VGSGGERLLPEWYKE 84 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (434)
+||+|||||++|+.+|..|++.|.+ |+|+|+.+....... .....+++... ..........+.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLK---VLVLDGGRSKVKGVS----------RVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCTTTTCS----------CCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCcccCch----------hhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999999886 999999863211100 01111211000 000011234455667
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCccccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLT 130 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~ 130 (434)
.+++++.+ .+.+++.+.. .+.+.++ ++.+|.+|+|+|..|..+.
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHH
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccc
Confidence 89999999 9999886543 4666777 8999999999999985444
No 106
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.15 E-value=3.4e-11 Score=120.52 Aligned_cols=39 Identities=31% Similarity=0.256 Sum_probs=34.0
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcC--CCCCcEEEEeCCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKEAV 42 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g--~~~~~V~vie~~~~ 42 (434)
|....+||||||||+||+++|..|++.| .+ |+||||...
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~---V~vlEk~~~ 41 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAK---IALISKVYP 41 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCC---EEEEESSCG
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCc---EEEEeCCCC
Confidence 4445689999999999999999999998 76 999999753
No 107
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.11 E-value=7.3e-11 Score=112.78 Aligned_cols=122 Identities=23% Similarity=0.288 Sum_probs=72.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-------CCCccCccccCCCC-CCCCCCc------
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-------ERPALSKAYLFPEG-TARLPGF------ 66 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~------ 66 (434)
||++++||+|||||+||+++|..|+++|.+ |+|+|+.+.... .++.+......... ....+.+
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 666789999999999999999999999987 999999875321 01111000000000 0000000
Q ss_pred ----------------ccccCC-----------CCCCCChhhHhhcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcce
Q 013914 67 ----------------HVCVGS-----------GGERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQI 117 (434)
Q Consensus 67 ----------------~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~ 117 (434)
...... .....+.+.+++.|++++.++.|..+..+.. .|.+.++ ++.+|+
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~ 178 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAAS 178 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeE
Confidence 000000 0001123334557999999999999977655 3555566 899999
Q ss_pred EEEecCCCc
Q 013914 118 LVIATGSTV 126 (434)
Q Consensus 118 lvlAtG~~~ 126 (434)
+|+|||..+
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999876
No 108
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.09 E-value=1.3e-09 Score=103.31 Aligned_cols=58 Identities=22% Similarity=0.316 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++.+++|+++.. +++.+..+++.+| ++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 456778888889999999999999999987 3456656888888 899999999999654
No 109
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.08 E-value=3.9e-10 Score=111.09 Aligned_cols=56 Identities=14% Similarity=0.229 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
..+.+.+.+.+++.|++++++++|++|.. +++++.+|++++|+++.||.||++++.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~ 276 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADV 276 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC-
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCH
Confidence 56788889999999999999999999987 577888999999999999999998874
No 110
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.06 E-value=2.3e-09 Score=103.60 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCC---eEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGT---VAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~---~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
+..+...+.+.+++.|+++++++ +|+++.. +++.+.+|.+.+|+++.+|.||+|+|..
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 45778888899999999999999 9999987 4566777999999889999999999953
No 111
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.03 E-value=2.4e-09 Score=102.86 Aligned_cols=59 Identities=12% Similarity=0.143 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc--EEECCEEEEcccCcc
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR--TLEADIVVVGVGGRP 263 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~--~~~~D~vi~a~G~~p 263 (434)
..+.+.+.+.+++.|++++.+++|+++..++++....+.+.+|+ ++.+|.||.|+|...
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 45667777788888999999999999987555555667778887 699999999999765
No 112
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.03 E-value=4.6e-11 Score=117.12 Aligned_cols=150 Identities=19% Similarity=0.159 Sum_probs=104.3
Q ss_pred EcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHH---------HHHHHhCCCCcEEEECCCHHHHHHHHHHHh
Q 013914 114 KYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKL---------VEAIKAKKNGKAVVVGGGYIGLELSAALKI 184 (434)
Q Consensus 114 ~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---------~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~ 184 (434)
.||++++++|++|..+++ .+.+.++++......+..++ ..........+|+|||+|+.|+.+|..|++
T Consensus 37 ~~~~l~~~~g~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~ 113 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLS---QYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELAL 113 (497)
T ss_dssp HHHHHHHHHTCCTTCHHH---HHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcE---eehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHH
Confidence 468899999999876653 33222333333444444333 111111235789999999999999999999
Q ss_pred CCCeEEEEccCCccCCc----cC----------------------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 185 NNIDVSMVYPEPWCMPR----LF----------------------------TADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 185 ~g~~v~lv~~~~~~~~~----~~----------------------------~~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
.|.+|+++++.+.+... .. ..++.+.+.+.+++.||+++++++|+++.
T Consensus 114 ~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~ 193 (497)
T 2bry_A 114 LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQ 193 (497)
T ss_dssp TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEE
T ss_pred CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEE
Confidence 99999999987654210 00 14666778888888999999999999998
Q ss_pred ecC-CCcEEEEEe--C-CC--cEEECCEEEEcccCccChh
Q 013914 233 TNA-DGEVKEVKL--K-DG--RTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 233 ~~~-~g~v~~v~~--~-~g--~~~~~D~vi~a~G~~p~~~ 266 (434)
.++ ++....+.+ . +| .++.+|.||.|+|..+...
T Consensus 194 ~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 194 PPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 632 233345655 4 66 4789999999999877654
No 113
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.00 E-value=5.6e-10 Score=98.05 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC-CCCCCCccCccccCCCCCCCC-CCcccccCC---CCCCCCh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV-APYERPALSKAYLFPEGTARL-PGFHVCVGS---GGERLLP 79 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~ 79 (434)
.+||+|||||++|+++|..|++.|.+ |+|||+... .. . .+ ... ........+ ..+....+. .....+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~~~~G-~-~~-~~~-~~~~~~~~~~~~~~d~~g~~~~~~~~~l~ 75 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSLDAVM-M-PF-LPP-KPPFPPGSLLERAYDPKDERVWAFHARAK 75 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTT-C-CS-SCC-CSCCCTTCHHHHHCCTTCCCHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCcCC-c-cc-Ccc-ccccchhhHHhhhccCCCCCHHHHHHHHH
Confidence 68999999999999999999999987 999999732 11 0 00 000 000000000 000000000 0001223
Q ss_pred hhHhhc-CcEEEcCCeeEEEECCCCE---EEccCCcEEEcceEEEecCCCcc
Q 013914 80 EWYKEK-GIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 80 ~~~~~~-~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~ 127 (434)
+.+++. +++++. +.|+++..+... +.+.++.++.+|++|+|+|....
T Consensus 76 ~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 76 YLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 445555 899985 589988765543 55667778999999999998654
No 114
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.93 E-value=6.8e-09 Score=100.49 Aligned_cols=59 Identities=27% Similarity=0.414 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
...+.+.+.+.+++.||+++++++|+++.. +++.+..|.+.+|+++.+|.||+|+|..+
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 367788888899999999999999999986 35666788899998899999999999765
No 115
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.92 E-value=2.6e-08 Score=101.71 Aligned_cols=57 Identities=9% Similarity=0.088 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-EEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-TLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~-~~~~D~vi~a~G~~ 262 (434)
+..+.+.+.+.+++.|++++.+++|+++..++++ ..|.+.+|. ++.+|.||+|+|..
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcc
Confidence 4678888889999999999999999999884444 478888887 89999999999954
No 116
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.92 E-value=4.7e-08 Score=93.27 Aligned_cols=58 Identities=24% Similarity=0.350 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
+..+.+.+.+.+++.|++++.+++|+++.. +++.+..+.+.+| ++.+|.||+|+|...
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 347788888999999999999999999987 3566677888888 799999999999654
No 117
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.92 E-value=1.3e-08 Score=101.10 Aligned_cols=60 Identities=25% Similarity=0.455 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhc-CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 205 ADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 205 ~~~~~~~~~~l~~~-GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
..+.+.+.+.+++. ||+++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 56788888888888 9999999 999998755677778899999889999999999975543
No 118
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.92 E-value=2.1e-09 Score=101.79 Aligned_cols=120 Identities=19% Similarity=0.205 Sum_probs=76.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcc--C-------------ccccCCCCCCCCCCccc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPAL--S-------------KAYLFPEGTARLPGFHV 68 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~ 68 (434)
+.+||+|||||++|+++|..|++.|.+ |+|+|+.+......... . ..+.... .....+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~ 84 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGS--HTPPTYET 84 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTC--BCCSCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhC--CCccceEE
Confidence 358999999999999999999999987 99999986542111000 0 0000000 00000000
Q ss_pred cc-----------CC--------CCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccc
Q 013914 69 CV-----------GS--------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 69 ~~-----------~~--------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.. +. .....+.+.+.+.|++++.++.|+.++.+. .+.+.+|.++.+|.||.|+|......
T Consensus 85 ~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 85 WMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp EETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred EeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHHHH
Confidence 00 00 001122334455789999999999998755 88888888899999999999876543
No 119
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.90 E-value=5e-09 Score=101.54 Aligned_cols=58 Identities=22% Similarity=0.373 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEec--------------CCCcEEEEEeCCCcEE--ECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN--------------ADGEVKEVKLKDGRTL--EADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~--------------~~g~v~~v~~~~g~~~--~~D~vi~a~G~~ 262 (434)
+..+.+.+.+.+++.|++++.+++|+++..+ +++.+..+.+.+| ++ .+|.||+|+|..
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 4578888999999999999999999999762 3455567888888 68 999999999964
No 120
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.90 E-value=2.2e-09 Score=102.46 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=73.3
Q ss_pred CCC-CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCc--cCc---------cccC-----CCCCCCC
Q 013914 1 MAE-KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPA--LSK---------AYLF-----PEGTARL 63 (434)
Q Consensus 1 M~~-~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~--~~~---------~~~~-----~~~~~~~ 63 (434)
||+ +++||+|||||++|+++|..|++.|.+ |+|+|+.+........ +.. +++. ......+
T Consensus 1 ~M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 1 GMTDNHIDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred CCCCCcCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 453 458999999999999999999999987 9999998653111110 000 0000 0000000
Q ss_pred -----CC--c-ccccC----------CC---CCCCChhhHhhc-CcEEEcCCeeEEEECCCC----EEEccCCcEEEcce
Q 013914 64 -----PG--F-HVCVG----------SG---GERLLPEWYKEK-GIELILSTEIVRADIASK----TLLSATGLIFKYQI 117 (434)
Q Consensus 64 -----~~--~-~~~~~----------~~---~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~ 117 (434)
.+ . ..... .. ....+.+.+.+. |++++.++.|+.++.+.. .+.+.+|+++++|.
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~ 157 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRV 157 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCE
Confidence 00 0 00000 00 000112223334 899999999999987654 56677888899999
Q ss_pred EEEecCCCccc
Q 013914 118 LVIATGSTVLR 128 (434)
Q Consensus 118 lvlAtG~~~~~ 128 (434)
+|.|+|.....
T Consensus 158 vV~AdG~~s~v 168 (399)
T 2x3n_A 158 VVGADGIASYV 168 (399)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCCChHH
Confidence 99999986543
No 121
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.90 E-value=1.7e-09 Score=106.99 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=39.8
Q ss_pred HHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 209 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 209 ~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
..+..+.++.|++++++++|++|..++ +.+ .|.+.+|+++++|.||+|++..
T Consensus 216 ~l~~~l~~~lg~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 216 QVSERIMDLLGDRVKLERPVIYIDQTR-ENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHHGGGEESSCCEEEEECSS-SSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHHHcCCcEEcCCeeEEEEECC-CeE-EEEECCCeEEEeCEEEECCCHH
Confidence 333444455588999999999998743 344 4888999999999999999853
No 122
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.90 E-value=1.6e-08 Score=96.22 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCcEEECCEEEEcccCcc
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~---~~g~~~~~D~vi~a~G~~p 263 (434)
..+.+.+.+.+++.|++++.+++|+++..+ ++.+.+|.+ .++.++++|.||.|.|...
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 355677778888899999999999999873 565555666 3556899999999999765
No 123
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.89 E-value=4.4e-10 Score=113.15 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc------CCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~------g~~~~~V~vie~~~~ 42 (434)
.+||||||||+||++||+.|++. |.+ |+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~---V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAK---ILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCC---EEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCc---EEEEEecCC
Confidence 58999999999999999999997 887 999999754
No 124
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.86 E-value=3.3e-09 Score=101.12 Aligned_cols=124 Identities=13% Similarity=0.079 Sum_probs=74.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-c--cCc---------cccCCCCCCCCCCccc
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-A--LSK---------AYLFPEGTARLPGFHV 68 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~--~~~---------~~~~~~~~~~~~~~~~ 68 (434)
|+++.+||+|||||++|+++|..|++.|.+ |+|+|+.+....... . +.. ++..............
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEY 77 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEE
Confidence 666789999999999999999999999987 999999865211100 0 000 0000000000000000
Q ss_pred c---cCCC--------C---CCCChhhHhh--cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcc
Q 013914 69 C---VGSG--------G---ERLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 69 ~---~~~~--------~---~~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~ 127 (434)
. .+.. . ...+.+.+.+ .+++++.++.|+++..+.. ++.+.+|.++.+|.||.|+|....
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 0 0000 0 0011122222 3789999999999976654 466678888999999999998654
No 125
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.86 E-value=4.3e-08 Score=93.03 Aligned_cols=71 Identities=17% Similarity=0.288 Sum_probs=55.0
Q ss_pred CeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 187 IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 187 ~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
....++.+....+. +..+.+.+.+.+++.|++++.+++|+++..++++ ..+.+.+| ++.+|.||+|+|...
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGH
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccH
Confidence 45666666555443 4678888899999999999999999999874443 45677766 799999999999754
No 126
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.85 E-value=1.1e-07 Score=97.01 Aligned_cols=57 Identities=12% Similarity=0.154 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
+..+...+.+.+++.|++++++++|+++..++ +. ..|.+.+|.++.+|.||+|+|..
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~-v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DC-WLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-Ce-EEEEECCCCEEECCEEEECCCcc
Confidence 46788888899999999999999999998743 33 47888888889999999999964
No 127
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.85 E-value=6.4e-09 Score=99.93 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
...+.+.+.+.+++.|++++++++|++|.. +++.+ + +.+|+++.+|.||+|+|......++
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 467888999999999999999999999987 34444 4 5678899999999999965444444
No 128
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.85 E-value=5.7e-09 Score=103.50 Aligned_cols=39 Identities=21% Similarity=0.435 Sum_probs=35.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|++..+||+|||||++|+++|..|+++|.+ |+|||+.+.
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~ 39 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPG 39 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSS
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 666679999999999999999999999987 999999875
No 129
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.84 E-value=1e-11 Score=124.63 Aligned_cols=54 Identities=17% Similarity=0.310 Sum_probs=43.1
Q ss_pred HhcCcEEEcCCeEEEEEecCC-CcEEEEEeC---CCc--EEECCEEEEcccCccChhhhh
Q 013914 216 ANKGIKIIKGTVAVGFTTNAD-GEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFK 269 (434)
Q Consensus 216 ~~~GV~~~~~~~v~~i~~~~~-g~v~~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~ 269 (434)
++.||++++++.|+++..+++ +++.+|++. +|+ ++.+|.||+|+|..|+..++.
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 445899999999999987433 377777774 354 678999999999999998774
No 130
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.83 E-value=1.5e-09 Score=107.55 Aligned_cols=158 Identities=14% Similarity=0.179 Sum_probs=92.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC-CCCCCCCccCcccc------------CCC------------
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA-VAPYERPALSKAYL------------FPE------------ 58 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~------------~~~------------ 58 (434)
..+||+|||||+||++||..|++.|.+ |+|||+.. ..+...|..+.+.. ...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLH---CLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCc---EEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 468999999999999999999999987 99999984 12221121111100 000
Q ss_pred ---CCCCCCCccc---ccCC-CCCCCChhhHhh-cCcEEEcCCeeEEEECCCCE---EEccCCcEEEcceEEEecCCCcc
Q 013914 59 ---GTARLPGFHV---CVGS-GGERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 59 ---~~~~~~~~~~---~~~~-~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~ 127 (434)
....-+.... .... .......+.+++ .|++++.+ .|..+..+... |.+.+|.++.+|.+|+|||+.+.
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 0000000000 0000 000111223444 48999765 88887765554 55677888999999999999876
Q ss_pred cccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Q 013914 128 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMV 192 (434)
Q Consensus 128 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv 192 (434)
.+.. .+.. ... ..+++ |+.++++++..|.+.|.+|..+
T Consensus 176 ~~i~---~G~~-----~~~----------------~g~~v---G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 176 GLIH---IGMD-----HFP----------------GGRST---AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp CEEE---ETTE-----EEE----------------CSSST---TSCCBCSHHHHHHHTTCCEEEE
T ss_pred ccce---eeee-----eec----------------ccccc---CCchhhhhHHHHHhCCceEEee
Confidence 4432 2211 110 11221 3567788999999999888665
No 131
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.80 E-value=8.9e-09 Score=101.17 Aligned_cols=120 Identities=17% Similarity=0.180 Sum_probs=74.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC--------------CCC-Ccc-----CccccCCCCC-C--
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP--------------YER-PAL-----SKAYLFPEGT-A-- 61 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~--------------~~~-~~~-----~~~~~~~~~~-~-- 61 (434)
.+||||||||++|+++|+.|++.|++ |+|||+.+... +.. +.. ..+.+..... .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCC---CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe---EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 47999999999999999999999987 99999985310 000 000 0000000000 0
Q ss_pred CCCCcc--------cccCCC------------------CCCCChhhHhhcCcEEEcCCeeEEEECCCC---EEEccCCcE
Q 013914 62 RLPGFH--------VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASK---TLLSATGLI 112 (434)
Q Consensus 62 ~~~~~~--------~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~ 112 (434)
..+.+. ...+.. ....+.+.+++.|++++.++.|+.+..+.. .|.+.++++
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~ 263 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE 263 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE
Confidence 000000 000000 001122334567999999999999987654 266778888
Q ss_pred EEcceEEEecCCCcc
Q 013914 113 FKYQILVIATGSTVL 127 (434)
Q Consensus 113 ~~~d~lvlAtG~~~~ 127 (434)
+.+|.+|+|+|..+.
T Consensus 264 i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 264 IKSRHVVLAVGHSAR 278 (549)
T ss_dssp EECSCEEECCCTTCH
T ss_pred EECCEEEECCCCChh
Confidence 999999999998873
No 132
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.80 E-value=1.1e-08 Score=100.84 Aligned_cols=124 Identities=16% Similarity=0.244 Sum_probs=73.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-ccCcc----ccC----------CCCC--------
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSKA----YLF----------PEGT-------- 60 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~~~~----~~~----------~~~~-------- 60 (434)
+++||+|||||++|+++|..|++.|++ |+|||+.+...+... .+... ++. ....
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 358999999999999999999999987 999999874221110 00000 000 0000
Q ss_pred --CCCCCcccccC-----C-C-C--------CCCChhhHhhcCcEEEcCCeeEEEECCCCE---EE--ccCCc--EEEcc
Q 013914 61 --ARLPGFHVCVG-----S-G-G--------ERLLPEWYKEKGIELILSTEIVRADIASKT---LL--SATGL--IFKYQ 116 (434)
Q Consensus 61 --~~~~~~~~~~~-----~-~-~--------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~--~~~~~--~~~~d 116 (434)
.....+..... . . . ...+.+.+.+.|++++.++.|+.+..+... +. ..+|. ++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 00000000000 0 0 0 011223344579999999999999876653 33 34563 79999
Q ss_pred eEEEecCCCccccc
Q 013914 117 ILVIATGSTVLRLT 130 (434)
Q Consensus 117 ~lvlAtG~~~~~~~ 130 (434)
.+|.|+|.......
T Consensus 163 ~VI~AdG~~S~vr~ 176 (512)
T 3e1t_A 163 FIVDASGNRTRVSQ 176 (512)
T ss_dssp EEEECCCTTCSSGG
T ss_pred EEEECCCcchHHHH
Confidence 99999998765443
No 133
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.80 E-value=1.6e-08 Score=95.73 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
+..+...+.+.+++.|++++.+++|+++..+++ . ..|++.+| ++.+|.||+|+|..
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChh
Confidence 467788888999999999999999999987433 3 67888888 89999999999964
No 134
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.79 E-value=8.4e-09 Score=93.45 Aligned_cols=121 Identities=15% Similarity=0.117 Sum_probs=70.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEeCCCCCCCCCCccCccccCC-----CCC-----CCCC-----Ccc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEAVAPYERPALSKAYLFP-----EGT-----ARLP-----GFH 67 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~~V~vie~~~~~~~~~~~~~~~~~~~-----~~~-----~~~~-----~~~ 67 (434)
.++||+|||||++|+++|..|+++ |.+ |+|||+.+..... .......+.. ... ..++ .+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 113 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYV 113 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEE
Confidence 357999999999999999999997 877 9999998653211 0000000000 000 0000 000
Q ss_pred cccC-CCCCCCChhhHhh-cCcEEEcCCeeEEEECCCCEE---Ecc---------CC-----cEEEcceEEEecCCCccc
Q 013914 68 VCVG-SGGERLLPEWYKE-KGIELILSTEIVRADIASKTL---LSA---------TG-----LIFKYQILVIATGSTVLR 128 (434)
Q Consensus 68 ~~~~-~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~v---~~~---------~~-----~~~~~d~lvlAtG~~~~~ 128 (434)
.... ......+.+.+.+ .|++++.++.|+++..+...+ .+. ++ .++.+|.+|+|+|..+..
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 0000 0000011222333 689999999999998765533 321 22 579999999999976643
No 135
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.79 E-value=2.1e-09 Score=104.34 Aligned_cols=127 Identities=19% Similarity=0.259 Sum_probs=75.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCC-CC-Cc--cCccccCCCCC-C--------CCCCcc
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPY-ER-PA--LSKAYLFPEGT-A--------RLPGFH 67 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~-~~-~~--~~~~~~~~~~~-~--------~~~~~~ 67 (434)
||++++||+|||||+||+++|..|++.|.+ |+|+|+.+.... .. +. ++...+..... . ...+..
T Consensus 2 mm~~~~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~ 78 (453)
T 3atr_A 2 MKELKYDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIK 78 (453)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceE
Confidence 665679999999999999999999999987 999999864211 00 10 00000000000 0 000000
Q ss_pred ---------cccCC-----C---CCCCChhhHhhcCcEEEcCCeeEEEECCCCE---EEcc---CCc--EEEcceEEEec
Q 013914 68 ---------VCVGS-----G---GERLLPEWYKEKGIELILSTEIVRADIASKT---LLSA---TGL--IFKYQILVIAT 122 (434)
Q Consensus 68 ---------~~~~~-----~---~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~---~~~--~~~~d~lvlAt 122 (434)
..... . ....+.+.+.+.|++++.++.|+.+..+... |.+. +|+ ++.+|.+|.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 79 LYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp EECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred EECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 00000 0 0011122234578999999999998876654 3343 565 78999999999
Q ss_pred CCCccccc
Q 013914 123 GSTVLRLT 130 (434)
Q Consensus 123 G~~~~~~~ 130 (434)
|.......
T Consensus 159 G~~s~vr~ 166 (453)
T 3atr_A 159 GYSRSFRS 166 (453)
T ss_dssp GGGCTTGG
T ss_pred CCchhhHH
Confidence 97655443
No 136
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.79 E-value=5.4e-08 Score=90.99 Aligned_cols=95 Identities=18% Similarity=0.227 Sum_probs=78.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC---------------------Ccc-C---------CHHHHHHHH
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------------------PRL-F---------TADIAAFYE 212 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~---------------------~~~-~---------~~~~~~~~~ 212 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.. . ..++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 379999999999999999999999999999886531 000 0 067888899
Q ss_pred HHHHhcCcEEEcCCeEEEEEecCCCcEEE-EEeCCCcEEECCEEEEcccC
Q 013914 213 GYYANKGIKIIKGTVAVGFTTNADGEVKE-VKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 213 ~~l~~~GV~~~~~~~v~~i~~~~~g~v~~-v~~~~g~~~~~D~vi~a~G~ 261 (434)
+.+++.|++++++++|++++.. ++ ... +++.+| ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~-~~-~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHF-GE-RLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEE-TT-EEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEEC-CC-cEEEEEeCCC-EEEeCEEEECCCC
Confidence 9999999999999999999873 23 345 888888 8999999999995
No 137
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.77 E-value=1.3e-08 Score=101.18 Aligned_cols=121 Identities=21% Similarity=0.196 Sum_probs=71.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC--ccCc---------cc----cCCC-----C-CCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP--ALSK---------AY----LFPE-----G-TARL 63 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~--~~~~---------~~----~~~~-----~-~~~~ 63 (434)
++||+|||||++|+++|..|+++|.+ |+|||+.+....... .++. ++ .... . ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 57999999999999999999999987 999999865321100 0000 00 0000 0 0000
Q ss_pred C--Cccccc---CCC---------CCCCChhhHhhcCcEEEcCCeeEEEECCCCE--EEc--cCC-cEEEcceEEEecCC
Q 013914 64 P--GFHVCV---GSG---------GERLLPEWYKEKGIELILSTEIVRADIASKT--LLS--ATG-LIFKYQILVIATGS 124 (434)
Q Consensus 64 ~--~~~~~~---~~~---------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~--~~~-~~~~~d~lvlAtG~ 124 (434)
. .+.... ... ....+.+.+.+.|++++.+++|+.+..+... +.+ .+| .++++|+||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0 000000 000 0011223344569999999999998876653 444 566 68999999999998
Q ss_pred Cccc
Q 013914 125 TVLR 128 (434)
Q Consensus 125 ~~~~ 128 (434)
....
T Consensus 206 ~S~v 209 (570)
T 3fmw_A 206 RSTV 209 (570)
T ss_dssp SCHH
T ss_pred CchH
Confidence 6543
No 138
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.75 E-value=1.5e-08 Score=101.07 Aligned_cols=121 Identities=21% Similarity=0.277 Sum_probs=73.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-ccCc---------c-----------------cc
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSK---------A-----------------YL 55 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~~~---------~-----------------~~ 55 (434)
|+.+||+|||||+||+++|..|++.|.+ |+|||+.+....... .+.. + +.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 4469999999999999999999999987 999999864322110 0000 0 00
Q ss_pred CCCCCCCCCCccccc------CC------C---CCCCChhhHhhcCcEEEcCCeeEEEECC-CC--EEEcc-CC--cEEE
Q 013914 56 FPEGTARLPGFHVCV------GS------G---GERLLPEWYKEKGIELILSTEIVRADIA-SK--TLLSA-TG--LIFK 114 (434)
Q Consensus 56 ~~~~~~~~~~~~~~~------~~------~---~~~~~~~~~~~~~v~~~~~~~v~~i~~~-~~--~v~~~-~~--~~~~ 114 (434)
...... ...+.... .. . ....+.+.+++.|++++.++.|+.+..+ .. .|.+. +| .++.
T Consensus 98 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~ 176 (591)
T 3i3l_A 98 WGQDQA-PWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVE 176 (591)
T ss_dssp CSSSCC-CEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEE
T ss_pred ecCCCc-cceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEE
Confidence 000000 00000000 00 0 0011223344579999999999999875 32 35555 55 5799
Q ss_pred cceEEEecCCCcc
Q 013914 115 YQILVIATGSTVL 127 (434)
Q Consensus 115 ~d~lvlAtG~~~~ 127 (434)
+|.+|.|+|....
T Consensus 177 AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 177 SDFVIDAGGSGGP 189 (591)
T ss_dssp ESEEEECCGGGCH
T ss_pred cCEEEECCCCcch
Confidence 9999999997653
No 139
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.74 E-value=9.9e-08 Score=93.76 Aligned_cols=102 Identities=19% Similarity=0.196 Sum_probs=84.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc------------------------------------C----Cc-
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------------------------------------M----PR- 201 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~------------------------------------~----~~- 201 (434)
...++|||+|+.|+.+|..|++.|.+|+++++.+.+ + ..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987532 0 00
Q ss_pred -c-------------C----------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE
Q 013914 202 -L-------------F----------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE 251 (434)
Q Consensus 202 -~-------------~----------------~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~ 251 (434)
. . ...+.+.+.+.+++.|++++++++|+++.. +++.+..+++.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEE
Confidence 0 0 045666777888889999999999999987 45667789999999999
Q ss_pred CCEEEEcccCccCh
Q 013914 252 ADIVVVGVGGRPLI 265 (434)
Q Consensus 252 ~D~vi~a~G~~p~~ 265 (434)
||.||+|+|..+..
T Consensus 266 Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 266 SRHVVLAVGHSARD 279 (549)
T ss_dssp CSCEEECCCTTCHH
T ss_pred CCEEEECCCCChhh
Confidence 99999999998753
No 140
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.74 E-value=1.2e-07 Score=90.37 Aligned_cols=56 Identities=20% Similarity=0.183 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
+..+.+.+.+.+++.|++++.+++|+++..++ +. ..+.+.+| ++.+|.||+|+|..
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA-DG-VSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-Ce-EEEEECCC-EEEcCEEEEcCCcC
Confidence 34567788888889999999999999998733 33 34666666 79999999999964
No 141
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.73 E-value=1.4e-08 Score=99.38 Aligned_cols=123 Identities=16% Similarity=0.130 Sum_probs=73.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC-ccCcc---ccCCCCC-CCCCCccc-----ccCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP-ALSKA---YLFPEGT-ARLPGFHV-----CVGSG 73 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~-~~~~~---~~~~~~~-~~~~~~~~-----~~~~~ 73 (434)
..+||+|||||++|+++|..|++.|.+ |+|||+.+..+..+. ..... .+..... .....+.. .....
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 167 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGAR---VVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQ 167 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCe---EEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHH
Confidence 368999999999999999999999987 999999865431110 00000 0000000 00000000 00000
Q ss_pred CCCCChhhHhhcCcEEEcCCeeEEEECC---C--CEEEc--c-CC--cEEEcceEEEecCCCcccc
Q 013914 74 GERLLPEWYKEKGIELILSTEIVRADIA---S--KTLLS--A-TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 74 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~---~--~~v~~--~-~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
....+.+.+++.|++++.++.|+++..+ . -.+.+ . +| .++.+|++|+|+|..+...
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 0112334445579999999999999863 1 24555 3 45 4689999999999887543
No 142
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.72 E-value=1.3e-07 Score=93.66 Aligned_cols=61 Identities=28% Similarity=0.443 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
...+.+.+.+.+++.|++++.+ +|+++..++++.+..+.+.+|+++.+|.||.|+|.....
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 3567788888888899999999 899998755666678889999889999999999975543
No 143
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.72 E-value=1.1e-07 Score=99.27 Aligned_cols=58 Identities=26% Similarity=0.311 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
+..+...+.+.+++.|++++.+++|+++.. +++.+..|.+.+| ++.||.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 457888889999999999999999999987 3556667888888 799999999999654
No 144
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.71 E-value=8e-08 Score=91.52 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=72.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCC--cc--Cc----cccCCC----------CCC---
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERP--AL--SK----AYLFPE----------GTA--- 61 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~--~~--~~----~~~~~~----------~~~--- 61 (434)
++.+||+|||||++|+++|..|++.|.+ |+|+|+.+....... .+ .. ..+... ...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 3468999999999999999999999987 999999864321100 00 00 000000 000
Q ss_pred --CCCCccc-cc-----C-CCCC----CCChhhHhh--cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCC
Q 013914 62 --RLPGFHV-CV-----G-SGGE----RLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGS 124 (434)
Q Consensus 62 --~~~~~~~-~~-----~-~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~ 124 (434)
...+... .. . .... ..+.+.+.+ .+++++.+++|+.+..+.. ++.+.+|.++.+|.||.|+|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 0000000 00 0 0000 001112221 1357888899999987654 466678878999999999998
Q ss_pred Cccccc
Q 013914 125 TVLRLT 130 (434)
Q Consensus 125 ~~~~~~ 130 (434)
......
T Consensus 181 ~S~vR~ 186 (398)
T 2xdo_A 181 MSKVRK 186 (398)
T ss_dssp TCSCCT
T ss_pred chhHHh
Confidence 664433
No 145
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.71 E-value=6.1e-08 Score=95.83 Aligned_cols=60 Identities=13% Similarity=0.318 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 205 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 205 ~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
..+.+.+.+.+++ .|++++.+ +|+++..++++.+..+++.+|.++.+|.||.|+|.....
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 4567788888888 89999999 599998755676678888888789999999999976543
No 146
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.70 E-value=3.9e-08 Score=94.54 Aligned_cols=59 Identities=20% Similarity=0.264 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
...+.+.+.+.+++.|++++++++|++|.. +++++..|.++ |+++.+|.||+|+|....
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHH
Confidence 366888899999999999999999999987 35666667775 778999999999995433
No 147
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.69 E-value=4.6e-08 Score=91.16 Aligned_cols=116 Identities=16% Similarity=0.250 Sum_probs=68.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEeCCCCCCCCCC----------ccC--ccccC--CC----------
Q 013914 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEAVAPYERP----------ALS--KAYLF--PE---------- 58 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~---~g~~~~~V~vie~~~~~~~~~~----------~~~--~~~~~--~~---------- 58 (434)
+||+|||||++|+++|+.|++ .|.+ |+|+||++..+.... ... ..++. +.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~---V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLY---LAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEE---EEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCce---EEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 599999999999999999999 7776 999999864221000 000 00000 00
Q ss_pred ------CCCCCCCc----------ccccCCC-CCCCChhhHhhcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEE
Q 013914 59 ------GTARLPGF----------HVCVGSG-GERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILV 119 (434)
Q Consensus 59 ------~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lv 119 (434)
....+... ....... .......+.+..+++++.++.|+++..+.. +|.+.+|.++.+|++|
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 00000000 0000000 001111223334899999999999987665 4556677778999999
Q ss_pred EecCC
Q 013914 120 IATGS 124 (434)
Q Consensus 120 lAtG~ 124 (434)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99863
No 148
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.68 E-value=6.8e-08 Score=89.67 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
++||+|||||++|+++|..|++.|.+ |+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 47999999999999999999999987 999999864
No 149
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.66 E-value=4.4e-08 Score=92.71 Aligned_cols=36 Identities=22% Similarity=0.447 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
.++||+|||||++|+++|+.|+++|.+ |+|||+...
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~~~ 51 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKN---TALFESGTM 51 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCC
Confidence 358999999999999999999999987 999999864
No 150
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.65 E-value=7.5e-08 Score=94.77 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC-c--EEECC-EEEEcccCc
Q 013914 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-R--TLEAD-IVVVGVGGR 262 (434)
Q Consensus 206 ~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g-~--~~~~D-~vi~a~G~~ 262 (434)
.+.+.+.+.+++.||+++++++++++..++++++.+|...++ + ++.+| .||+|+|--
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 788888899999999999999999999855788888876543 2 58896 999999943
No 151
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.64 E-value=2.1e-07 Score=91.92 Aligned_cols=102 Identities=21% Similarity=0.163 Sum_probs=83.2
Q ss_pred CcEEEECCCHHHHHHHHHHH-hCCCeEEEEccCCccCC--------c------------cC----------------CHH
Q 013914 164 GKAVVVGGGYIGLELSAALK-INNIDVSMVYPEPWCMP--------R------------LF----------------TAD 206 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~-~~g~~v~lv~~~~~~~~--------~------------~~----------------~~~ 206 (434)
.+|+|||+|+.|+.+|..|. +.|.+|+++++.+.+.. . .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999998653310 0 01 246
Q ss_pred HHHHHHHHHHhcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--CccCh
Q 013914 207 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 265 (434)
Q Consensus 207 ~~~~~~~~l~~~GV--~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G--~~p~~ 265 (434)
+.+.+.+.+++.|+ +++++++|.+++.++++....|++.+|+++.+|.||+|+| .+|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 77788888899998 8999999999987555556788999999999999999999 45544
No 152
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.64 E-value=5.1e-08 Score=95.54 Aligned_cols=121 Identities=16% Similarity=0.206 Sum_probs=73.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCC-C-cc-------------CccccCCCCCCC---CC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYER-P-AL-------------SKAYLFPEGTAR---LP 64 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~-~-~~-------------~~~~~~~~~~~~---~~ 64 (434)
++++||+|||||++|+++|..|+++|.+ |+|||+.+...... . .+ ...+... .... +.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~~ 84 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHFG 84 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEET
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-ccccccccc
Confidence 3578999999999999999999999987 99999986532111 0 00 0000000 0000 00
Q ss_pred CcccccC--CC------------CCCCChhhHhhcCcEEEcCCeeEEEECCCCE--EEccCCc---EEEcceEEEecCCC
Q 013914 65 GFHVCVG--SG------------GERLLPEWYKEKGIELILSTEIVRADIASKT--LLSATGL---IFKYQILVIATGST 125 (434)
Q Consensus 65 ~~~~~~~--~~------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~~~~---~~~~d~lvlAtG~~ 125 (434)
+...... .. ....+.+.+.+.|++++.+++++++..+... +.+.++. ++++|+||.|.|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 85 GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 0000000 00 0011223344568999999999999776654 4445553 79999999999986
Q ss_pred cc
Q 013914 126 VL 127 (434)
Q Consensus 126 ~~ 127 (434)
..
T Consensus 165 S~ 166 (500)
T 2qa1_A 165 SS 166 (500)
T ss_dssp CH
T ss_pred hH
Confidence 53
No 153
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.64 E-value=2.1e-07 Score=92.05 Aligned_cols=103 Identities=19% Similarity=0.187 Sum_probs=84.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC--------c------------c----------------CCHH
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--------R------------L----------------FTAD 206 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~--------~------------~----------------~~~~ 206 (434)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . . -.++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 35799999999999999999999999999998653210 0 0 1246
Q ss_pred HHHHHHHHHHhcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--CccCh
Q 013914 207 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 265 (434)
Q Consensus 207 ~~~~~~~~l~~~GV--~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G--~~p~~ 265 (434)
+.+.+.+.+++.|+ +++++++|++++.++++....|++.+|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77888888999998 8999999999987556556788999999999999999999 55554
No 154
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.63 E-value=1.7e-07 Score=93.15 Aligned_cols=58 Identities=22% Similarity=0.165 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g--~~~~~D~vi~a~G~~ 262 (434)
+..+...+.+.+++.|++++.+++|+++.. +++.+.++.+.+ | .++.+|.||.|+|..
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 567788888889999999999999999987 456666777653 3 478999999999953
No 155
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.63 E-value=1e-07 Score=88.20 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=82.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC---------------Ccc---CCHHHHHHHHHHHHhcCcEEEcC
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------------PRL---FTADIAAFYEGYYANKGIKIIKG 225 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~---------------~~~---~~~~~~~~~~~~l~~~GV~~~~~ 225 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.. ...++.+.+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 589999999999999999999999999999976432 100 13677888888899999999999
Q ss_pred CeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC---ccChh
Q 013914 226 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG---RPLIS 266 (434)
Q Consensus 226 ~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~---~p~~~ 266 (434)
++|.+++...++ ...+.+.+|+ +.+|.+|+|+|. .|...
T Consensus 88 ~~v~~i~~~~~~-~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQADG-VFKLVTNEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTTS-CEEEEESSEE-EEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCCC-cEEEEECCCE-EEeCEEEECCCCCcCCCCCC
Confidence 999999874332 3568888885 999999999998 66543
No 156
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.63 E-value=1.1e-07 Score=88.33 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=79.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC----cc------------CCc----cCCHHHHHHHHHHHHhcCcEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP----WC------------MPR----LFTADIAAFYEGYYANKGIKI 222 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~----~~------------~~~----~~~~~~~~~~~~~l~~~GV~~ 222 (434)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ .+. ....++.+.+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 5689999999999999999999999999999843 11 011 113578888899999999999
Q ss_pred EcCCeEEEEEecCCCcEEEEEe---CCCcEEECCEEEEcccCccChh
Q 013914 223 IKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 223 ~~~~~v~~i~~~~~g~v~~v~~---~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
+.++ +.+++... +. ..+.+ .++.++.+|.+|+|+|.+|...
T Consensus 102 ~~~~-v~~i~~~~-~~-~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 102 ITET-VSKVDLSS-KP-FKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp ECSC-EEEEECSS-SS-EEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEeE-EEEEEEcC-CE-EEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 9998 99998732 22 45555 4677899999999999876543
No 157
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.62 E-value=3e-09 Score=102.32 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
..++.+.+.+.+++.|++++++++|++|..++++++.+|++.+|+++.||.||++++..
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 35788899999999999999999999998756788889999999899999999999987
No 158
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.62 E-value=1.9e-07 Score=85.91 Aligned_cols=100 Identities=12% Similarity=0.111 Sum_probs=80.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccC--CccC--------Cc---cCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPE--PWCM--------PR---LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~--~~~~--------~~---~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++. ..+. +. ....++.+.+.+.+++.|++++. .++.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 48999999999999999999999999999985 1111 11 11357788888889999999999 88999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
+..++ ....+.+.+|+++.+|.+|+|+|..|...
T Consensus 95 i~~~~--~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IENRG--DEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEC----CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEecC--CEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 98732 22568888888999999999999887653
No 159
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.61 E-value=1.7e-07 Score=89.37 Aligned_cols=98 Identities=19% Similarity=0.241 Sum_probs=79.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc---------------------------c-------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------L------------- 202 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~---------------------------~------------- 202 (434)
...|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 458999999999999999999999999999987643100 0
Q ss_pred -----------------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcc
Q 013914 203 -----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGV 259 (434)
Q Consensus 203 -----------------------~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~ 259 (434)
...++.+.+.+.+++.||+++++++|+++..++++ ..+.+.+| ++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECCc-EEEeeEEEECC
Confidence 01256677888888899999999999999874333 57888888 89999999999
Q ss_pred cCcc
Q 013914 260 GGRP 263 (434)
Q Consensus 260 G~~p 263 (434)
|..+
T Consensus 184 G~~S 187 (417)
T 3v76_A 184 GGKS 187 (417)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 9765
No 160
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.60 E-value=6.5e-08 Score=96.59 Aligned_cols=36 Identities=31% Similarity=0.402 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||||||||+||+++|..|+++|.+ |+|||+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 58999999999999999999999987 9999998753
No 161
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.60 E-value=2.7e-07 Score=85.57 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=79.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------C-----------ccCCHHHHHHHHHHHHhcCcEEEcC
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------P-----------RLFTADIAAFYEGYYANKGIKIIKG 225 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~-------~-----------~~~~~~~~~~~~~~l~~~GV~~~~~ 225 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....++.+.+.+.+++.+++++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999876431 0 0012567777888888889999999
Q ss_pred CeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 226 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 226 ~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
++|.+++..++ ...+.+.+|+++.+|.+|+|+|..
T Consensus 86 ~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 99999987332 356778888889999999999983
No 162
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.59 E-value=4.2e-07 Score=85.22 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=80.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------C--------c---cCCHHHHHHHHHHHHhcCcEEEc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------P--------R---LFTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~-------~--------~---~~~~~~~~~~~~~l~~~GV~~~~ 224 (434)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + . ....++.+.+.+.+++.++++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 3589999999999999999999999999999875431 1 0 01267778888888999999999
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 225 GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 225 ~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
+++|..+...+++ ...+.+.+|+++.+|.+|+|+|..
T Consensus 94 ~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDG-TFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCc-eEEEEECCCcEEEeeEEEEccCCC
Confidence 9999999874332 356788889899999999999983
No 163
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.59 E-value=6e-08 Score=96.69 Aligned_cols=36 Identities=17% Similarity=0.328 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||||||||++|+++|..|+++|.+ |+|||+.+..
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~~ 156 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPFS 156 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCC
Confidence 57999999999999999999999987 9999998753
No 164
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.58 E-value=1.5e-07 Score=92.20 Aligned_cols=121 Identities=17% Similarity=0.194 Sum_probs=72.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCC-CC-cc-------------CccccCC--CCCCCCCCc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYE-RP-AL-------------SKAYLFP--EGTARLPGF 66 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~-~~-~~-------------~~~~~~~--~~~~~~~~~ 66 (434)
+.+||+|||||++|+++|..|+++|.+ |+|||+.+..... +. .+ ...+... .....+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 87 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR 87 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce
Confidence 468999999999999999999999987 9999998653211 00 00 0000000 000000000
Q ss_pred ccccC----CC----------CCCCChhhHhhcCcEEEcCCeeEEEECCCCE--EEccCCc---EEEcceEEEecCCCcc
Q 013914 67 HVCVG----SG----------GERLLPEWYKEKGIELILSTEIVRADIASKT--LLSATGL---IFKYQILVIATGSTVL 127 (434)
Q Consensus 67 ~~~~~----~~----------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~~~~---~~~~d~lvlAtG~~~~ 127 (434)
..... .. ....+.+.+.+.|++++.+++++++..+... +.+.++. ++++|+||.|.|....
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 88 PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 00000 00 0011223344568999999999999876553 4455553 7999999999998653
No 165
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.57 E-value=5.3e-07 Score=87.53 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCe---EEEEccCCccCCc------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKI---NNID---VSMVYPEPWCMPR------------------------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~---~g~~---v~lv~~~~~~~~~------------------------------------ 201 (434)
++|+|||+|+.|+.+|..|.+ .|.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 9999987542100
Q ss_pred --------------c-CCHHHHHHHHHHHHhcCcE--EEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCEEEEcc
Q 013914 202 --------------L-FTADIAAFYEGYYANKGIK--IIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGV 259 (434)
Q Consensus 202 --------------~-~~~~~~~~~~~~l~~~GV~--~~~~~~v~~i~~~~~g~v~~v~~~~---g--~~~~~D~vi~a~ 259 (434)
+ -..++.+.+.+.+++.|++ ++++++|..++..+++....|++.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 0 0145667788888888998 9999999999874443234566544 4 578999999999
Q ss_pred c--CccChh
Q 013914 260 G--GRPLIS 266 (434)
Q Consensus 260 G--~~p~~~ 266 (434)
| .+|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677654
No 166
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.57 E-value=7.2e-08 Score=91.15 Aligned_cols=101 Identities=22% Similarity=0.341 Sum_probs=78.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC-c-cCCH---------HHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP-R-LFTA---------DIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~-~-~~~~---------~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
+..+++|||+|+.|+.+|..|...+.+|+++++.+.+.- + .++. ++.....+.+++.||+++++++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 456899999999999999999888899999998876421 0 0111 1112234567889999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
++. +.+ .+++++|+++.+|.+|+|||.+|...
T Consensus 88 id~--~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDP--NNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 986 332 57889999999999999999887653
No 167
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.57 E-value=4.5e-07 Score=83.08 Aligned_cols=98 Identities=19% Similarity=0.258 Sum_probs=77.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCc---c--------CCc----cCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 165 KAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~-~v~lv~~~~~---~--------~~~----~~~~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
+++|||+|+.|+.+|..|.+.|. +|+++++... + .+. ....++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999997521 0 111 11256777888888999999998 789
Q ss_pred EEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 229 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.+++..+ ....+.+.+|+++.+|.+|+|+|..|..
T Consensus 82 ~~i~~~~--~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSKKD--SHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEEET--TEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEcC--CEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 9988632 2345777888899999999999977654
No 168
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.57 E-value=8.1e-08 Score=91.78 Aligned_cols=122 Identities=14% Similarity=0.065 Sum_probs=70.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCcc--Cc---------cccCCC--CCCCCCCccccc
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPAL--SK---------AYLFPE--GTARLPGFHVCV 70 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~--~~---------~~~~~~--~~~~~~~~~~~~ 70 (434)
+++||+|||||++|+++|..|+++|.+ |+|+|+.+......... .. +++... .......+....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 98 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRD 98 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEE
Confidence 468999999999999999999999987 99999986532110000 00 000000 000000000000
Q ss_pred ---C----------------CCCC----CCChhhHhh--cCcEEEcCCeeEEEECCCCE--EEccCCcEEEcceEEEecC
Q 013914 71 ---G----------------SGGE----RLLPEWYKE--KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATG 123 (434)
Q Consensus 71 ---~----------------~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG 123 (434)
+ .... ..+...+.+ ..++++.++.|+.+..+... +.+.+|+++.+|.||.|+|
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 99 FRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCC
Confidence 0 0000 001111111 12788899999999876654 5667888999999999999
Q ss_pred CCccc
Q 013914 124 STVLR 128 (434)
Q Consensus 124 ~~~~~ 128 (434)
.....
T Consensus 179 ~~S~v 183 (407)
T 3rp8_A 179 SHSAL 183 (407)
T ss_dssp TTCSS
T ss_pred cChHH
Confidence 76543
No 169
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.56 E-value=4.9e-07 Score=85.45 Aligned_cols=98 Identities=27% Similarity=0.298 Sum_probs=80.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc-----------------------------------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 201 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~----------------------------------------- 201 (434)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred --cC-----------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 202 --LF-----------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 202 --~~-----------~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.+ ...+.+.+.+.+++.|++++++++|++++. ++ .+++.+|+++.+|.||.|+|..+..
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHH
Confidence 00 045577788888889999999999999986 44 5778889899999999999987654
No 170
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.56 E-value=1.1e-07 Score=91.65 Aligned_cols=100 Identities=21% Similarity=0.326 Sum_probs=78.8
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCCccCCc----------cCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~---~g~~v~lv~~~~~~~~~----------~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
++++|||+|+.|+.+|..|++ .|.+|+++++.+.+.-. ....++...+.+.+++.||+++. .+++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 89999999998865211 01223444456778889999985 57899
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
++. +++ .+++++|+++.+|.+|+|+|.+|+...+
T Consensus 84 id~--~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDA--EAQ--NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEc--CCC--EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 976 332 5778899899999999999998876543
No 171
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.56 E-value=3.8e-07 Score=82.85 Aligned_cols=100 Identities=16% Similarity=0.169 Sum_probs=77.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC---------Cc---cCCHHHHHHHHHHHHhc-CcEEEcCCeEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------PR---LFTADIAAFYEGYYANK-GIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~---------~~---~~~~~~~~~~~~~l~~~-GV~~~~~~~v~~ 230 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+... +. ....++.+.+.+.+++. +++++.+ +++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 479999999999999999999999999999643211 10 11246777888888876 7888765 7999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
++..+++ ..+.+.+|+++.+|.+|+|+|.+|...
T Consensus 82 i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSFGE--FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 9873333 578889998999999999999887543
No 172
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.56 E-value=3.7e-07 Score=83.66 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=79.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCC--ccC-----------CccCCHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i 231 (434)
+++|||+|+.|+.+|..|.+.|.+|+++++.. .+. +....+++.+.+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999996531 110 00012467788888899999999999999999
Q ss_pred EecCC-CcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 232 TTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 232 ~~~~~-g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
....+ +....+.+++|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 22357788888899999999999987654
No 173
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.53 E-value=1.7e-07 Score=89.02 Aligned_cols=123 Identities=17% Similarity=0.147 Sum_probs=72.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC---CCCCC-ccCcc---ccCCCC--------CCCCCCc---
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA---PYERP-ALSKA---YLFPEG--------TARLPGF--- 66 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~---~~~~~-~~~~~---~~~~~~--------~~~~~~~--- 66 (434)
++||+|||||++|+++|..|++.|.+ |+|+|+.+.. ...+. .+... .+.... ......+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGID---NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 48999999999999999999999987 9999998631 00000 00000 000000 0000000
Q ss_pred --------cc--cc-CCC--------CCCCChhhHhhcCcEEEcCCeeEEEECCC---CEEEc-cCCc--EEEcceEEEe
Q 013914 67 --------HV--CV-GSG--------GERLLPEWYKEKGIELILSTEIVRADIAS---KTLLS-ATGL--IFKYQILVIA 121 (434)
Q Consensus 67 --------~~--~~-~~~--------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~---~~v~~-~~~~--~~~~d~lvlA 121 (434)
.. .. +.. ....+.+.+.+.|++++.++.++++..+. -.+.+ .+|. ++.+|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 00 00 000 00112223345689999999999998652 35665 6776 6999999999
Q ss_pred cCCCccccc
Q 013914 122 TGSTVLRLT 130 (434)
Q Consensus 122 tG~~~~~~~ 130 (434)
+|.......
T Consensus 159 dG~~S~vr~ 167 (394)
T 1k0i_A 159 DGFHGISRQ 167 (394)
T ss_dssp CCTTCSTGG
T ss_pred CCCCcHHHH
Confidence 998655433
No 174
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.52 E-value=7.2e-07 Score=84.72 Aligned_cols=99 Identities=14% Similarity=0.157 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC--------------------cc---------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--------------------RL--------------------- 202 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~--------------------~~--------------------- 202 (434)
..|+|||+|+.|+.+|..+++.|.+|+++++.+.+.. .+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4799999999999999999999999999998764310 00
Q ss_pred ----------------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC---CCcEEEEEeCCCcEEECCEEEE
Q 013914 203 ----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVKEVKLKDGRTLEADIVVV 257 (434)
Q Consensus 203 ----------------------~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~---~g~v~~v~~~~g~~~~~D~vi~ 257 (434)
...++.+.+.+.+++.||+++++++|+++..++ ++. ..+.+.+| ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 134556778888889999999999999998631 233 46777777 799999999
Q ss_pred cccCccC
Q 013914 258 GVGGRPL 264 (434)
Q Consensus 258 a~G~~p~ 264 (434)
|+|..+.
T Consensus 163 AtG~~s~ 169 (401)
T 2gqf_A 163 ATGGLSM 169 (401)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9998774
No 175
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.52 E-value=6.2e-07 Score=88.65 Aligned_cols=102 Identities=12% Similarity=0.115 Sum_probs=82.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------------------------C---------c--cCCHHH
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------P---------R--LFTADI 207 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~-------------------------~---------~--~~~~~~ 207 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + . .-.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999999999999875431 0 0 013577
Q ss_pred HHHHHHHHHhcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--CccCh
Q 013914 208 AAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 265 (434)
Q Consensus 208 ~~~~~~~l~~~GV--~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G--~~p~~ 265 (434)
.+.+.+..++.|+ .++++++|.+++.++++....|++++|+++.+|.||+|+| .+|+.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 7888888888888 7999999999987555556788999999999999999999 55554
No 176
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.52 E-value=1.2e-06 Score=86.17 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
...+.+.+.+.+++.|++++.+ +|+++..++++.+..|++.+|+++.+|.||.|+|....
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3567778888888899999999 89999875667777889999988999999999997543
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.51 E-value=1.7e-06 Score=85.21 Aligned_cols=104 Identities=14% Similarity=0.231 Sum_probs=81.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC--ccC-----------CccCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~--~~~-----------~~~~~~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
....++|||+|+.|+.+|..+++.|.+|+++++.. .+. +....+++.+.+.+.+++.|++++.++++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 35579999999999999999999999999997531 111 11123567888888899999999999999
Q ss_pred EEEEecCC-CcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 229 VGFTTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~~-g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
..+....+ +....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99975222 23457888899899999999999977653
No 178
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.51 E-value=2.1e-07 Score=87.65 Aligned_cols=35 Identities=14% Similarity=0.334 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
++||+|||||++|+++|+.|+++|.+ |+|||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLN---VLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCC
Confidence 48999999999999999999999987 999999864
No 179
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.50 E-value=7.2e-07 Score=89.01 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccC
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~---~~g~--~~~~D~vi~a~G~ 261 (434)
...+.+.+.+.+++.||+++.++.+.++..++++++.++.. .+|+ .+.++.||+|+|.
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 35677778888888999999999999998744677777764 4665 5889999999994
No 180
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.50 E-value=4.4e-07 Score=84.03 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEcc----CCcc------------CCc----cCCHHHHHHHHHHHHhcCcEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYP----EPWC------------MPR----LFTADIAAFYEGYYANKGIKII 223 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~----~~~~------------~~~----~~~~~~~~~~~~~l~~~GV~~~ 223 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++ ...+ .+. ....++.+.+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999997 2111 111 1134677788888899999999
Q ss_pred cCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 224 KGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 224 ~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.++ +..++...++ ..+.+ +|+++.+|.+|+|+|..|..
T Consensus 89 ~~~-v~~i~~~~~~--~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 89 TET-VTKVDFSSKP--FKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CCC-CCEEECSSSS--EEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EeE-EEEEEEcCCE--EEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 987 8888763332 45666 77789999999999987654
No 181
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.49 E-value=4e-07 Score=90.88 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc------CCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~------g~~~~~V~vie~~~~~ 43 (434)
.+||||||||+||+++|..|+++ |.+ |+|||+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCCCCC
Confidence 48999999999999999999998 887 9999998653
No 182
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.49 E-value=7.3e-07 Score=82.27 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=77.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------cCCcc----CCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPRL----FTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-----------~~~~~----~~~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++... ..+.+ ...++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998721 01110 1246777888888999999988 578
Q ss_pred EEEEecC-CCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 229 VGFTTNA-DGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~-~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.+++... ++....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8888731 221134566788899999999999987754
No 183
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.48 E-value=9.2e-07 Score=80.79 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=71.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc----------cC--CccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW----------CM--PRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~----------~~--~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
.|+|||+|+.|+.+|..+++.|.+|+++++... +. +...++++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 589999999999999999999999999987531 11 011234556655566666554444444556665
Q ss_pred ecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 233 TNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 233 ~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
..+++ ...+.+.+|+++.+|.+|+|||.+|..
T Consensus 88 ~~~~~-~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 88 KQSTG-LFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp ECTTS-CEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred ecCCC-cEEEEECCCCEEEeCEEEEccCCcccc
Confidence 53333 356888999999999999999987754
No 184
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.48 E-value=1.6e-06 Score=81.39 Aligned_cols=98 Identities=19% Similarity=0.291 Sum_probs=76.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCC------c------c-CCc----------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNI-DVSMVYPEP------W------C-MPR---------------------------- 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~-~v~lv~~~~------~------~-~~~---------------------------- 201 (434)
.+++|||+|+.|+.+|..|.+.|. +|+++++.+ . + .+.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999999875 0 0 000
Q ss_pred cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 202 LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 ~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
.....+.+.+.+.+++.|++++.+++|.++...+++ ..+.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 001345667778888899999999999999873333 45777777 6899999999998653
No 185
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.48 E-value=1.2e-07 Score=85.32 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||||||+||..|+++|++ |+||||++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCC
Confidence 48999999999999999999999998 9999998753
No 186
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.47 E-value=5.2e-07 Score=89.14 Aligned_cols=56 Identities=23% Similarity=0.268 Sum_probs=40.0
Q ss_pred cCCcEEeCCCCCCCCCcEEEecccccccccccCccee-cccHHHHHHHHHHHHHHHhcc
Q 013914 275 NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR-VEHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 275 ~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~-~~~~~~A~~~g~~aa~~i~~~ 332 (434)
..|+|.+|.+.||++|++||+|+|+... ..|..+. -.+...+.-.|+.|+++++..
T Consensus 353 t~GGi~vd~~~~t~I~GLyAaGE~a~~g--~hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 353 TCGGVMVDDHGRTDVEGLYAIGEVSYTG--LHGANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp ESCEEECCTTCBCSSBTEEECGGGEECS--SSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcEEECCCCCCccCCEEecccccccc--ccCCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 5699999999999999999999998421 1122111 134556777788888887654
No 187
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.47 E-value=2.8e-07 Score=89.41 Aligned_cols=99 Identities=13% Similarity=0.236 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||++|+.+|..|++.|.+ |+++++.+... +.. .. .+ ...+.+.+++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~---V~lv~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~ 220 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAE---VIVLEYMDRIL---PTM---------DL---EV--------SRAAERVFKK 220 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecCCccc---ccc---------CH---HH--------HHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 000 00 00 1234556777
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+.+. +.+.++.++.+|.+|+|+|.+|+.+
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 89999999999999876654 4445778899999999999988754
No 188
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.46 E-value=7.2e-08 Score=92.77 Aligned_cols=96 Identities=21% Similarity=0.329 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccCCccC----------CHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLF----------TADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g--~~v~lv~~~~~~~~~~~----------~~~~~~~~~~~l~~~GV~~~~~~~v~~i 231 (434)
|+|+|||+|+.|+.+|..|++.+ .+|+++++.+.+.-... ..++...+.+.+++.||+++.+ +|++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999865 79999999876532101 0111122344567789999877 58999
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 232 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 232 ~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
+. +.+ .|++++|+++++|.+|+|+|.++.
T Consensus 82 d~--~~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred EC--CCC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 86 442 578899999999999999997653
No 189
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.45 E-value=2.3e-07 Score=88.56 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+|+||||||+||++|..|+++|++ |+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCCC
Confidence 4799999999999999999999987 9999998653
No 190
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.45 E-value=7.2e-07 Score=87.50 Aligned_cols=36 Identities=17% Similarity=0.476 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
+++||+|||||++|+++|+.|+++|++ |+|+|+++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC---EEEEECCCC
Confidence 468999999999999999999999987 999999864
No 191
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.44 E-value=1.9e-06 Score=86.04 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=78.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc-----------------------------------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 201 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~----------------------------------------- 201 (434)
...|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999886543210
Q ss_pred ----------------------------------------------cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013914 202 ----------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 202 ----------------------------------------------~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~ 235 (434)
.....+.+.+.+.+++.||+++++++|+++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0012445566777788999999999999998744
Q ss_pred CCcEEEEEeC--CCc--EEECCEEEEcccCc
Q 013914 236 DGEVKEVKLK--DGR--TLEADIVVVGVGGR 262 (434)
Q Consensus 236 ~g~v~~v~~~--~g~--~~~~D~vi~a~G~~ 262 (434)
++++.++.+. +|+ ++.+|.||+|+|..
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 4777777665 675 68999999999953
No 192
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.44 E-value=5.8e-08 Score=92.68 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~ 42 (434)
.+||+|||||++|+++|+.|+++ |.+ |+|||+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCCCC
Confidence 48999999999999999999999 887 999999754
No 193
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.44 E-value=3e-07 Score=92.62 Aligned_cols=39 Identities=23% Similarity=0.351 Sum_probs=35.1
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|++..+||||||||.||++||+.|++.|.+ |+||||...
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~---V~vlEK~~~ 39 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLS---TIVLSLIPV 39 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCG
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 655578999999999999999999999987 999999864
No 194
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.42 E-value=1.3e-06 Score=87.08 Aligned_cols=99 Identities=23% Similarity=0.268 Sum_probs=76.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc------------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~------------------------------------------ 201 (434)
-.|+|||+|..|+.+|..+++.|.+|+++++.+.+...
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 36999999999999999999999999999986532110
Q ss_pred ---------------------------------------------cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013914 202 ---------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 236 (434)
Q Consensus 202 ---------------------------------------------~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~ 236 (434)
.....+.+.+.+.+++.||+++++++|+++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 00123446667777889999999999999987433
Q ss_pred CcEEEEEeC--CCc--EEECCEEEEcccCc
Q 013914 237 GEVKEVKLK--DGR--TLEADIVVVGVGGR 262 (434)
Q Consensus 237 g~v~~v~~~--~g~--~~~~D~vi~a~G~~ 262 (434)
+++.++.+. +|+ ++.+|.||+|+|..
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 777777664 675 68899999999943
No 195
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.42 E-value=2.7e-07 Score=84.60 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||++|+++|..|+++ |.+ |+|||+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~---V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLR---ITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSC---EEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCE---EEEEeCCCcc
Confidence 58999999999999999999997 776 9999998653
No 196
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.42 E-value=2.5e-07 Score=86.88 Aligned_cols=99 Identities=22% Similarity=0.317 Sum_probs=73.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC--cc--------CC-HHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--RL--------FT-ADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~--~~--------~~-~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
.+.+++|||+|+.|+.+|..|++.| +|+++++.+.... .. .+ .++.....+.+++.||+++.++++..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4679999999999999999999999 9999998765321 00 01 11112234567788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
++. +.. .|. .+|+++.+|.+|+|||.+|...
T Consensus 86 id~--~~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDR--GRK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EET--TTT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 976 332 344 5778899999999999887653
No 197
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.41 E-value=1.2e-06 Score=80.51 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=75.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------cCCc----cCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
.+++|||+|+.|+.+|..|.+.|.+|+++++... ..+. ...+++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999985310 0111 1235677788888899999999986 8
Q ss_pred EEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 229 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
..++... +. ..+ +.+++++.+|.+|+|+|.+|..
T Consensus 85 ~~i~~~~-~~-~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDLQN-RP-FRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEECSS-SS-EEE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEecC-CE-EEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 8887632 22 344 5677889999999999987654
No 198
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.41 E-value=2.2e-07 Score=88.81 Aligned_cols=39 Identities=15% Similarity=0.366 Sum_probs=32.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|| +.+||+|||||++|+++|..|++.|.++ |+|+|+.+.
T Consensus 1 M~-~~~dVvIVGaG~aGl~~A~~L~~~G~~~--v~v~E~~~~ 39 (410)
T 3c96_A 1 MS-EPIDILIAGAGIGGLSCALALHQAGIGK--VTLLESSSE 39 (410)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCSE--EEEEESSSS
T ss_pred CC-CCCeEEEECCCHHHHHHHHHHHhCCCCe--EEEEECCCC
Confidence 44 4689999999999999999999987542 899999865
No 199
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.40 E-value=1.4e-06 Score=84.22 Aligned_cols=101 Identities=21% Similarity=0.132 Sum_probs=76.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCccCC----c---------------------------------c-
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP----R---------------------------------L- 202 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~--~v~lv~~~~~~~~----~---------------------------------~- 202 (434)
..+|+|||+|+.|+.+|..|.+.|. +|+++++.+.+.. . .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5789999999999999999999999 9999998743210 0 0
Q ss_pred ---------------------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc---E
Q 013914 203 ---------------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR---T 249 (434)
Q Consensus 203 ---------------------------~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g~---~ 249 (434)
....+.+.+.+.+++.++.++++++|++++..+++ ..|++.+ |+ +
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~--~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS--WVVTYKGTKAGSPISK 163 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE--EEEEEEESSTTCCEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe--EEEEEeecCCCCeeEE
Confidence 01245667777777778889999999999873322 4555554 76 7
Q ss_pred EECCEEEEcccC--ccCh
Q 013914 250 LEADIVVVGVGG--RPLI 265 (434)
Q Consensus 250 ~~~D~vi~a~G~--~p~~ 265 (434)
+.+|.||+|+|. .|+.
T Consensus 164 ~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEESEEEECCCSSSSBCB
T ss_pred EEeCEEEECCCCCCCCCC
Confidence 999999999997 6654
No 200
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.40 E-value=2e-06 Score=79.07 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------cCCc---cCCHHHHHHHHHHHHhcCcEEEcCCeEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR---LFTADIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-----------~~~~---~~~~~~~~~~~~~l~~~GV~~~~~~~v~ 229 (434)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++. .++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999987421 0111 11256777788888999999998 6788
Q ss_pred EEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 230 GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 230 ~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
+++...+ ...+.+ ++.++.+|.+|+|+|..|..
T Consensus 96 ~i~~~~~--~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 96 SIKKTQG--GFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEETT--EEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEeCC--EEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 8876322 234555 56689999999999987654
No 201
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.40 E-value=1.5e-06 Score=82.75 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=79.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC-------------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------- 200 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~------------------------------------------- 200 (434)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999998654300
Q ss_pred --c--------------cCCHHHHHHHHHHHHhc-CcEEEcCCeEEEEEecCCCcEE-EEEeCCCcEEECCEEEEcccCc
Q 013914 201 --R--------------LFTADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVK-EVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 201 --~--------------~~~~~~~~~~~~~l~~~-GV~~~~~~~v~~i~~~~~g~v~-~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
. .....+.+.+.+.+++. |++++++++|++++.++++ +. .+++.+|+++++|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCC
Confidence 0 00124566677777777 9999999999999874443 32 6788899899999999999976
Q ss_pred cCh
Q 013914 263 PLI 265 (434)
Q Consensus 263 p~~ 265 (434)
...
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 543
No 202
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.39 E-value=5.5e-07 Score=85.91 Aligned_cols=97 Identities=16% Similarity=0.290 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+|+|||+|+.|+.+|..|++.|.+ |+++++.+... .+ .++. . ......+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l-~~--------------~~~~-~------~~~~l~~~l~~ 199 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVH---VSLVETQPRLM-SR--------------AAPA-T------LADFVARYHAA 199 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS-TT--------------TSCH-H------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCccc-cc--------------ccCH-H------HHHHHHHHHHH
Confidence 47899999999999999999999876 99999985421 00 0000 0 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.+++ +. .+.+.+|+++.+|.+|+|+|.+|+.
T Consensus 200 ~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 200 QGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp TTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEECC
T ss_pred cCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCccH
Confidence 899999999999998 44 7888888899999999999988764
No 203
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.39 E-value=5e-07 Score=86.15 Aligned_cols=97 Identities=16% Similarity=0.344 Sum_probs=74.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCccCC-------cc-----CCHHHHHHHHHHHHhcCcEEEcCCeEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP-------RL-----FTADIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~--~v~lv~~~~~~~~-------~~-----~~~~~~~~~~~~l~~~GV~~~~~~~v~ 229 (434)
++++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+ ...++.....+.+++.+++++. +++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 8999998763211 00 0111222345667889999999 8999
Q ss_pred EEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 230 GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 230 ~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.++. +++ .+.+.+|+++.+|.+++|||.+|..
T Consensus 81 ~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDR--EGR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEET--TTT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEC--CCC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 9986 332 5778899999999999999987654
No 204
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.39 E-value=1.9e-07 Score=89.80 Aligned_cols=98 Identities=20% Similarity=0.346 Sum_probs=75.1
Q ss_pred CcEEEECCCHHHHHHHHHHHh--CCCeEEEEccCCccCCcc----------CCHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRL----------FTADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~--~g~~v~lv~~~~~~~~~~----------~~~~~~~~~~~~l~~~GV~~~~~~~v~~i 231 (434)
++++|||+|+.|+.+|..|++ .|.+|+++++.+.+.... ...++...+.+.+++.||+++.+ +++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 589999999999999999999 789999999988763211 01112223345567789999975 78888
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 232 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 232 ~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
+. +.+ .+.+++|+++.+|.+|+|+|.+|+..
T Consensus 82 d~--~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EC--CCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 76 332 57788898899999999999887654
No 205
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.39 E-value=2.3e-07 Score=88.63 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCCccCCc----------cCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~---~g~~v~lv~~~~~~~~~----------~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.|++++.+ ++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 479999999999999999999 89999999988764211 012233445667778899999988 8888
Q ss_pred EEecCCCcEEEEEeCCCc----EEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGR----TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~----~~~~D~vi~a~G~~p~~~ 266 (434)
++. +++ .+++.+++ ++++|.+|+|+|.+|+..
T Consensus 81 i~~--~~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDA--KSS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EET--TTT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeC--CCC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 876 333 35555554 389999999999988765
No 206
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.39 E-value=8.8e-07 Score=84.36 Aligned_cols=101 Identities=25% Similarity=0.348 Sum_probs=74.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccCCccCCHHHH---------HHHHHHHHhcCcEEEcCCeEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLFTADIA---------AFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g--~~v~lv~~~~~~~~~~~~~~~~---------~~~~~~l~~~GV~~~~~~~v~~i 231 (434)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++.+..........+. ..-.+.+.+.||+++.+ +++.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 689999999999999999998865 5899999887643221111111 01123456789999876 58888
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013914 232 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 232 ~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
+. +.+ .+.+.+|+++.+|.+|+|+|.+++....
T Consensus 81 d~--~~~--~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DP--DKK--LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ET--TTT--EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ec--cCc--EEEecccceeecceeeeccCCccccCCc
Confidence 76 332 5778999999999999999988876543
No 207
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.38 E-value=1.2e-06 Score=81.23 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC---cc--------CCc----cCCHHHHHHHHHHHHhcCcEEEcCCe
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP---WC--------MPR----LFTADIAAFYEGYYANKGIKIIKGTV 227 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~---~~--------~~~----~~~~~~~~~~~~~l~~~GV~~~~~~~ 227 (434)
..+++|||+|+.|+.+|..|.+.|.+|+++++.. .+ .+. ....++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 3579999999999999999999999999998531 00 111 1125677788888899999999987
Q ss_pred EEEEEecCCCcEEEE-EeCCCcEEECCEEEEcccCccCh
Q 013914 228 AVGFTTNADGEVKEV-KLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 228 v~~i~~~~~g~v~~v-~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
+.+++. .+. ..+ .+.+|+++.+|.+|+|+|.+|..
T Consensus 93 v~~i~~-~~~--~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 93 VESVSL-HGP--LKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEC-SSS--SEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEe-CCc--EEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 888876 222 245 67788899999999999987654
No 208
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.38 E-value=1e-06 Score=84.61 Aligned_cols=101 Identities=27% Similarity=0.428 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCccCC-------ccC-----CHHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP-------RLF-----TADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~--~v~lv~~~~~~~~-------~~~-----~~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .++ ...+.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999997 7999987654310 000 0111111235677899999999999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh
Q 013914 229 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL 267 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~~ 267 (434)
..++. +++ .+.+.+|+++.+|.+|+|+|.+|+...
T Consensus 84 ~~i~~--~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINR--DRQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEET--TTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEEC--CCC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99986 332 577788989999999999998886543
No 209
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.37 E-value=9.5e-07 Score=85.41 Aligned_cols=100 Identities=20% Similarity=0.235 Sum_probs=73.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
..++++|||+|++|+.+|..|++.|.+ |+++|+.+...- . .+ . +. ......+.++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~------~-~~----~---~~--------~~~~l~~~l~ 202 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILDRPLG------V-YL----D---KE--------FTDVLTEEME 202 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTT------T-TC----C---HH--------HHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCccccc------c-cC----C---HH--------HHHHHHHHHH
Confidence 357999999999999999999999876 999999854210 0 00 0 00 0123455667
Q ss_pred hcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccc
Q 013914 84 EKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
+.|++++.++.+.+++.+.+ .+.+ ++.++.+|.+|+|+|.+|+.+
T Consensus 203 ~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 203 ANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp TTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred hCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 78999999999999987643 2444 556899999999999988754
No 210
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.36 E-value=5.6e-07 Score=85.18 Aligned_cols=99 Identities=14% Similarity=0.189 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+..... . .+. . ......+.+++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~~-------~--------~~~-~------~~~~l~~~l~~ 199 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPCEQVMPG-------L--------LHP-A------AAKAVQAGLEG 199 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTT-------T--------SCH-H------HHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCcchhhc-------c--------cCH-H------HHHHHHHHHHH
Confidence 57899999999999999999999876 9999997542100 0 000 0 01234556677
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.+++.+.. .+.+.+++++.+|.+|+|+|..|+.
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 8999999999999876544 4666788889999999999988864
No 211
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.36 E-value=9.7e-07 Score=85.38 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +.+. . .+ .....+.+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~---~~--------~~~l~~~l~~ 220 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAK---THLFEMFDAPL---PSFD---------P---MI--------SETLVEVMNA 220 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTSC---------H---HH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCE---EEEEEeCCchh---hhhh---------H---HH--------HHHHHHHHHH
Confidence 46899999999999999999999876 99999875421 0000 0 00 1234566777
Q ss_pred cCcEEEcCCeeEEEECCC---CEEEccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+. ..+.+.+|+++.+|.+|+|+|.+|+..
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 899999999999998653 257777888899999999999988753
No 212
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.36 E-value=7.8e-07 Score=88.64 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.+||+|||+|++|+++|..|++.|.+ |+|+|+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~---v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAK---VILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCC---EEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEecCCCC
Confidence 57999999999999999999999987 9999998753
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.36 E-value=1.5e-06 Score=82.98 Aligned_cols=99 Identities=21% Similarity=0.407 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCe--EEEEccCCccCCc--cCCHHHH---------HHHHHHHHhcCcEEEcCCeEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNID--VSMVYPEPWCMPR--LFTADIA---------AFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~--v~lv~~~~~~~~~--~~~~~~~---------~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
++++|||+|+.|+.+|..|.+.|.+ |+++++.+.+.-. .+...+. ....+.+++.|++++.++++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 4899999999999999999999977 9999887654210 0111111 1123456788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
++. +.+ .+.+.+|+++.+|.+|+|||.+|...
T Consensus 83 id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDV--QTR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 986 332 57788999999999999999876643
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=6.6e-07 Score=86.77 Aligned_cols=97 Identities=20% Similarity=0.285 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||++|+.+|..|++.|.+ |+++++.+... +.. .. .+ .....+.+++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~ 224 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQ---VSVVEARERIL---PTY---------DS---EL--------TAPVAESLKK 224 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEEcCCccc---ccc---------CH---HH--------HHHHHHHHHH
Confidence 46899999999999999999999876 99999986421 000 00 00 1233456777
Q ss_pred cCcEEEcCCeeEEEECCCCEEEcc--CC--cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKTLLSA--TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~--~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++. .+ +.+. +| .++.+|.+++|+|.+|+.+
T Consensus 225 ~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 225 LGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp HTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred CCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 8999999999999987 43 4333 45 5899999999999998754
No 215
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.35 E-value=2.4e-06 Score=78.24 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=75.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc---C-------------Cc----cCCHHHHHHHHHHHHhcCcEEEc
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC---M-------------PR----LFTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~---~-------------~~----~~~~~~~~~~~~~l~~~GV~~~~ 224 (434)
.++|||+|+.|+.+|..+++.|.+|+++++.+.- + +. ...+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 5899999999999999999999999999875320 0 00 11256778888889999999886
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 225 GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 225 ~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.. +.......+ ...+.+.++.++.+|.+|+|||.+|..
T Consensus 86 ~~-v~~~~~~~~--~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 86 ET-IDHVDFSTQ--PFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp CC-EEEEECSSS--SEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred eE-EEEeecCCC--ceEEEECCCeEEEEeEEEEcccccccc
Confidence 65 555554222 346677888899999999999987754
No 216
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.34 E-value=9.7e-07 Score=85.74 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+|+++.+... +.. .. .+ .....+.+++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~ 222 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAE---VTLIEYMPEIL---PQG---------DP---ET--------AALLRRALEK 222 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEcCCccc---ccc---------CH---HH--------HHHHHHHHHh
Confidence 36899999999999999999999876 99999975421 000 00 00 1234566778
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEcc-C--Cc--EEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSA-T--GL--IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~-~--~~--~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+.+. +.+. + |+ ++.+|.+++|+|.+|+..
T Consensus 223 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 89999999999999865543 4444 5 65 799999999999988754
No 217
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.34 E-value=5.4e-06 Score=76.71 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=71.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc-------------------cCCHHHHHHHHHHHH--------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-------------------LFTADIAAFYEGYYA-------- 216 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~-------------------~~~~~~~~~~~~~l~-------- 216 (434)
..|+|||+|++|+.+|..|++.|.+|+++++.+.+..+ ...+.+.+.+.....
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987543110 012333332222111
Q ss_pred ----------------------------------hcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE-CCEEEEcccC
Q 013914 217 ----------------------------------NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGG 261 (434)
Q Consensus 217 ----------------------------------~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~-~D~vi~a~G~ 261 (434)
..|++++++++|++++.++++ ..+++.+|+.+. +|.||.|+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g~ 160 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATPA 160 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSCH
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCCH
Confidence 128899999999999885444 568888998765 9999999995
Q ss_pred c
Q 013914 262 R 262 (434)
Q Consensus 262 ~ 262 (434)
.
T Consensus 161 ~ 161 (336)
T 1yvv_A 161 P 161 (336)
T ss_dssp H
T ss_pred H
Confidence 4
No 218
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.34 E-value=2.7e-06 Score=80.79 Aligned_cols=101 Identities=20% Similarity=0.359 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc-----cCCHHHHHH---------------------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----LFTADIAAF--------------------------- 210 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~-----~~~~~~~~~--------------------------- 210 (434)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .+.+...+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987653111 012222111
Q ss_pred ----------------HHHHHHh--cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013914 211 ----------------YEGYYAN--KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 211 ----------------~~~~l~~--~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~ 265 (434)
+.+.|.+ .|++++++++|++++.++++ ..+++.+|+++.+|.||.|.|.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET--VQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC--EEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE--EEEEECCCCEEECCEEEECCCcchhH
Confidence 2222222 38899999999999874444 46888999999999999999976543
No 219
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.32 E-value=9e-07 Score=87.80 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
.+||+|||||++|+++|..|+++|.+ |+|||+.+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~~~ 60 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVG---HLVVEQTDG 60 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 57999999999999999999999987 999999865
No 220
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.31 E-value=1.3e-06 Score=84.86 Aligned_cols=99 Identities=18% Similarity=0.186 Sum_probs=75.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... + .+... ......+.+++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~---Vtlv~~~~~~l---~----------------~~~~~----~~~~l~~~l~~ 219 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSE---VTVVALEDRLL---F----------------QFDPL----LSATLAENMHA 219 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---T----------------TSCHH----HHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCccc---c----------------ccCHH----HHHHHHHHHHH
Confidence 46899999999999999999999876 99999875421 0 00000 01233566778
Q ss_pred cCcEEEcCCeeEEEECCC--CEEEccCCc-EEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIAS--KTLLSATGL-IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~--~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+. ..+.+.+|+ ++.+|.+++|+|.+|+..
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 899999999999997644 356777888 899999999999988753
No 221
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.30 E-value=1.4e-06 Score=83.32 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+...- + .... . ....+.+.+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~l~-~----------~~~~---~--------~~~~l~~~l~~ 206 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEALPRVLA-R----------VAGE---A--------LSEFYQAEHRA 206 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTT-T----------TSCH---H--------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCe---EEEEecCCchhh-h----------hcCH---H--------HHHHHHHHHHh
Confidence 56899999999999999999999876 999999864210 0 0000 0 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCC---EEEccCCcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.++..+.. .+.+.+|+++.+|.+|+|+|..|+.
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 8999999999999987543 4777889899999999999998864
No 222
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.30 E-value=1.5e-06 Score=83.98 Aligned_cols=100 Identities=20% Similarity=0.363 Sum_probs=71.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCC------ccC-----CHHHHHHHHHHH-HhcCcEEEcCCeE
Q 013914 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP------RLF-----TADIAAFYEGYY-ANKGIKIIKGTVA 228 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~~------~~~-----~~~~~~~~~~~l-~~~GV~~~~~~~v 228 (434)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+.. ..+ ..++.....+.+ ++.|+++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999998 789999998875421 100 111122222333 6889999999999
Q ss_pred EEEEecCCCcEEEEEeCCC-cEEECCEEEEcccCccChh
Q 013914 229 VGFTTNADGEVKEVKLKDG-RTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~~~g-~~~~~D~vi~a~G~~p~~~ 266 (434)
..++. ++ ..+.+.++ .++.+|.+|+|||.+|...
T Consensus 83 ~~i~~--~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDT--GY--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECS--SE--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEec--CC--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 99864 22 45667777 4799999999999877643
No 223
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=1e-06 Score=85.31 Aligned_cols=99 Identities=16% Similarity=0.223 Sum_probs=72.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... + .+... ......+.+++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~----------------~~~~~----~~~~l~~~l~~ 223 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTK---VTILEGAGEIL---S----------------GFEKQ----MAAIIKKRLKK 223 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS---T----------------TSCHH----HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCccc---c----------------ccCHH----HHHHHHHHHHH
Confidence 47899999999999999999999876 99999975421 0 00000 01234456778
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEcc---CCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSA---TGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~---~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+... +.+. ++.++.+|.+++|+|.+|+..
T Consensus 224 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 224 KGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp TTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 89999999999999865543 3333 446799999999999988753
No 224
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.30 E-value=2.6e-06 Score=77.63 Aligned_cols=36 Identities=31% Similarity=0.357 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~ 43 (434)
.+||+|||||++|+++|..|++. |.+ |+|+|+.+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecCccc
Confidence 46999999999999999999998 776 9999998654
No 225
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.29 E-value=1.6e-06 Score=83.89 Aligned_cols=101 Identities=12% Similarity=0.232 Sum_probs=73.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccC--Cc----cCCH------HHHHHHHHHHHhcCcEEEcCCeEE
Q 013914 164 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM--PR----LFTA------DIAAFYEGYYANKGIKIIKGTVAV 229 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~--~~----~~~~------~~~~~~~~~l~~~GV~~~~~~~v~ 229 (434)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. +. .... ++.....+.+++.|++++.+++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999887643 10 0111 111113467788999999999999
Q ss_pred EEEecCCCcEEEEE-eCCCcEEECCEEEEcccCccChh
Q 013914 230 GFTTNADGEVKEVK-LKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 230 ~i~~~~~g~v~~v~-~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
+++. +.+...+. ..+++++.+|.+|+|+|.+|...
T Consensus 83 ~id~--~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDV--ENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEET--TTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEC--CCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 9986 33333343 23456799999999999988654
No 226
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.29 E-value=5.8e-06 Score=82.11 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=76.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-cC-----------------------Cc------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-~~-----------------------~~------------------ 201 (434)
-.|+|||+|+.|+++|..+++.|.+|.++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999987631 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 202 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 -----------~~~-~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
..+ ..+.+.+.+.+++ .|++++ +..|+.+.. +++.+.+|.+.+|.++.||.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 001 1345666777777 699995 568999976 456777899999988999999999997543
No 227
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.29 E-value=6.9e-07 Score=90.25 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~~~~V~vie~~~~ 42 (434)
..+||+|||||++|+++|..|++ .|.+ |+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 35799999999999999999999 8987 999999865
No 228
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.29 E-value=7.9e-07 Score=88.93 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
.+||||||||+||++||..|++.|.+ |+||||...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFN---TACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 57999999999999999999999987 999999854
No 229
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.28 E-value=3.5e-06 Score=77.08 Aligned_cols=100 Identities=17% Similarity=0.109 Sum_probs=74.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEE-EccCCcc------------CCc----cCCHHHHHHHHHHHHhcCcEEEcC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSM-VYPEPWC------------MPR----LFTADIAAFYEGYYANKGIKIIKG 225 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~l-v~~~~~~------------~~~----~~~~~~~~~~~~~l~~~GV~~~~~ 225 (434)
..+++|||+|+.|+.+|..|.+.|.+|++ +++. .+ .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 45899999999999999999999999999 8863 21 111 112578888889999999999998
Q ss_pred CeEEEEEecCCCcEEEEEe-CCCcEEECCEEEEcccCccChh
Q 013914 226 TVAVGFTTNADGEVKEVKL-KDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 226 ~~v~~i~~~~~g~v~~v~~-~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
++.++ .+++.....+.+ .++ ++.+|.+|+|+|.+|+..
T Consensus 83 -~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp -CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred -EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 78888 522112234323 334 899999999999877643
No 230
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.27 E-value=1.7e-06 Score=86.63 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=76.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccC----------Ccc-CC--HHHHHHHHHHHHhcCcEEEcCC
Q 013914 162 KNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM----------PRL-FT--ADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~----------~~~-~~--~~~~~~~~~~l~~~GV~~~~~~ 226 (434)
..++++|||+|+.|+.+|..|++. |.+|+++++.+.+. ... .+ ..+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457899999999999999999998 89999999987642 000 01 1123445566678899999999
Q ss_pred eEEEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013914 227 VAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 227 ~v~~i~~~~~g~v~~v~~-~~g~--~~~~D~vi~a~G~~p~~~ 266 (434)
.|.+++. +.+...+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 115 ~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINK--EEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999986 333334433 4565 789999999999877643
No 231
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.27 E-value=2.2e-06 Score=82.45 Aligned_cols=96 Identities=14% Similarity=0.206 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..+++.|.+ |+++++.+...- ...... .....+.+++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ll~------------~~d~~~-----------~~~~~~~l~~ 200 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKINK------------LMDADM-----------NQPILDELDK 200 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCCST------------TSCGGG-----------GHHHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCc---ceeeeeeccccc------------cccchh-----------HHHHHHHhhc
Confidence 45899999999999999999999876 999999864210 000000 1234567788
Q ss_pred cCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.+++ ...+.+.+++++.+|.+++|+|.+|+.
T Consensus 201 ~gV~i~~~~~v~~~~--~~~v~~~~g~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 201 REIPYRLNEEINAIN--GNEITFKSGKVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp TTCCEEESCCEEEEE--TTEEEETTSCEEECSEEEECCCEEESC
T ss_pred cceEEEeccEEEEec--CCeeeecCCeEEeeeeEEEEeceecCc
Confidence 899999999999876 456888899999999999999988864
No 232
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.27 E-value=7e-06 Score=81.20 Aligned_cols=99 Identities=19% Similarity=0.157 Sum_probs=76.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-cC-----------------------Cc------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-~~-----------------------~~------------------ 201 (434)
-.|+|||+|+.|+++|..+++.|.+|.++++.+. +. ..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999987631 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 202 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 -----------~~~-~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
..+ ..+.+.+.+.+++ .|++++ +..|+++.. +++.+.+|.+.+|.++.+|.||+|+|..++
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 001 1345566677777 599995 678999876 467777899999999999999999997654
No 233
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.26 E-value=7.3e-06 Score=81.14 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=76.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------Cc------------cC----------------CHHH
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR------------LF----------------TADI 207 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~--------~~------------~~----------------~~~~ 207 (434)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. .+ .+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 379999999999999999999999999999875421 00 01 1345
Q ss_pred HHHHHHHHHhcC--cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 208 AAFYEGYYANKG--IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 208 ~~~~~~~l~~~G--V~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
.+++....++.+ ++++++++|.+++.++++....|++++|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 566666667765 678999999999875554456788899989999999999994
No 234
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.24 E-value=5.2e-06 Score=78.76 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=76.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc------CCc------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------MPR------------------------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~------~~~------------------------------------ 201 (434)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ...
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 37999999999999999999999999999987631 000
Q ss_pred ----------------cCC-HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccC
Q 013914 202 ----------------LFT-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 202 ----------------~~~-~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~-~~g~--~~~~D~vi~a~G~ 261 (434)
.++ ..+.+.+.+.+.+.|++++++++|+++..++++. ..+++ .+|+ ++.+|+||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEecCCcEEEEEeCEEEECCCC
Confidence 001 2345566777777899999999999998643332 34666 6886 7999999999997
Q ss_pred ccCh
Q 013914 262 RPLI 265 (434)
Q Consensus 262 ~p~~ 265 (434)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 6554
No 235
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.24 E-value=2.3e-06 Score=83.38 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=74.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +.+. . .+ .....+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~---~~--------~~~l~~~l~~ 238 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSE---THLVIRGETVL---RKFD---------E---CI--------QNTITDHYVK 238 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCE---EEEECSSSSSC---TTSC---------H---HH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEeCCccc---cccC---------H---HH--------HHHHHHHHHh
Confidence 46899999999999999999999876 99999985421 0000 0 00 1234556777
Q ss_pred cCcEEEcCCeeEEEECCC----CEEEccCC-cEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIAS----KTLLSATG-LIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~----~~v~~~~~-~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.++..+. ..+.+.+| +++.+|.+|+|+|.+|+.
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 899999999999997642 25677788 789999999999988875
No 236
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.24 E-value=8.7e-07 Score=83.14 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=35.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
||++++||+|||||++|+++|++|+++|.+ |+|||+...
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~~~ 40 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYS---VHILARDLP 40 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCT
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCE---EEEEeccCC
Confidence 677789999999999999999999999886 999999863
No 237
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.24 E-value=9.8e-06 Score=77.13 Aligned_cols=100 Identities=16% Similarity=0.168 Sum_probs=73.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc------CCHHHH-----------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL------FTADIA----------------------------- 208 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~------~~~~~~----------------------------- 208 (434)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.... +.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 379999999999999999999999999999865442210 111111
Q ss_pred ------------------------------HHHHHHH-HhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEE
Q 013914 209 ------------------------------AFYEGYY-ANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVV 257 (434)
Q Consensus 209 ------------------------------~~~~~~l-~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~ 257 (434)
..+.+.| +..+..+++++++++++..+++.+ .++++||+++++|+||-
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEE
Confidence 1222233 223556889999999987556554 68999999999999999
Q ss_pred cccCccC
Q 013914 258 GVGGRPL 264 (434)
Q Consensus 258 a~G~~p~ 264 (434)
|-|....
T Consensus 161 ADG~~S~ 167 (412)
T 4hb9_A 161 ADGSNSK 167 (412)
T ss_dssp CCCTTCH
T ss_pred CCCCCcc
Confidence 9997543
No 238
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=3.3e-06 Score=82.74 Aligned_cols=98 Identities=16% Similarity=0.187 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+++++.+... +.+ .. .+ .....+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~---------d~---~~--------~~~l~~~l~~ 229 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGID---SYIFARGNRIL---RKF---------DE---SV--------INVLENDMKK 229 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSSSSC---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCe---EEEEecCCccC---ccc---------ch---hh--------HHHHHHHHHh
Confidence 46899999999999999999998876 99999975421 000 00 00 1234566778
Q ss_pred cCcEEEcCCeeEEEECCC---CEEEccCCcE-EEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIAS---KTLLSATGLI-FKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~---~~v~~~~~~~-~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.+++.+. ..+.+.+|++ +.+|.+++|+|.+|+.
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 899999999999998643 2567778877 9999999999999875
No 239
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.23 E-value=2.3e-06 Score=83.07 Aligned_cols=102 Identities=17% Similarity=0.170 Sum_probs=77.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-----CeEEEEccCCccCC-------c-------------------------------
Q 013914 165 KAVVVGGGYIGLELSAALKINN-----IDVSMVYPEPWCMP-------R------------------------------- 201 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g-----~~v~lv~~~~~~~~-------~------------------------------- 201 (434)
.|+|||+|+.|+.+|..|.+.| .+|+++++.+.+.- .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 99999988763210 0
Q ss_pred ----------c--CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC-CcE--EEEEeCCCc----EEECCEEEEcccCc
Q 013914 202 ----------L--FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEV--KEVKLKDGR----TLEADIVVVGVGGR 262 (434)
Q Consensus 202 ----------~--~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~-g~v--~~v~~~~g~----~~~~D~vi~a~G~~ 262 (434)
. ...++.+.+....++.+++++++++|.+++..++ +.. ..|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0134556666667777999999999999986321 332 256666765 89999999999987
Q ss_pred cChh
Q 013914 263 PLIS 266 (434)
Q Consensus 263 p~~~ 266 (434)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7643
No 240
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.23 E-value=6.6e-06 Score=77.60 Aligned_cols=55 Identities=20% Similarity=0.169 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 206 ~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
.+.+.+.+.+++.|++++.+++|+++..+ ++.+ .+.+.+| ++.+|.||+|+|...
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 45667778888899999999999999873 3444 6778777 899999999999754
No 241
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.23 E-value=7e-06 Score=79.44 Aligned_cols=101 Identities=21% Similarity=0.256 Sum_probs=78.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC----c--------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----R-------------------------------------- 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~----~-------------------------------------- 201 (434)
..|+|||+|+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999998754210 0
Q ss_pred ---------cC-CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC---CCc--EEECCEEEEcccCccCh
Q 013914 202 ---------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 202 ---------~~-~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~---~g~--~~~~D~vi~a~G~~p~~ 265 (434)
.+ ...+.+.+.+.+++.|++++.+++|+++.. +++.+.+|++. +|+ ++.+|.||.|+|.....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00 124566777778889999999999999987 34555555554 675 78999999999965543
No 242
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.22 E-value=2.8e-06 Score=82.71 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=64.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccC------CccCC------HH-------HHHHHHHHHHhcCcE
Q 013914 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM------PRLFT------AD-------IAAFYEGYYANKGIK 221 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~------~~~~~------~~-------~~~~~~~~l~~~GV~ 221 (434)
.++++|||+|+.|+.+|..|++. |.+|+++++.+.+. +..+. .+ +........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 89999999987641 11111 11 122223333458999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013914 222 IIKGTVAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 222 ~~~~~~v~~i~~~~~g~v~~v~~-~~g~--~~~~D~vi~a~G~~p~~~ 266 (434)
++++++|.+++. +++...+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDR--AAHTVEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEEC--CCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999986 333333432 3465 789999999999877643
No 243
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.21 E-value=3.3e-06 Score=82.54 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
..+++|||+|+.|+.+|..|++. |.+ |+++++.+... + .+... ......+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l---~----------------~~d~~----~~~~l~~~ 240 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQ---VDLAYRGDMIL---R----------------GFDSE----LRKQLTEQ 240 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCE---EEEEESSSSSS---T----------------TSCHH----HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCe---EEEEEcCCCcc---c----------------ccCHH----HHHHHHHH
Confidence 46899999999999999999998 775 99999985421 0 00000 01234566
Q ss_pred HhhcCcEEEcCCeeEEEECCC---CEEEccCCcEEEcceEEEecCCCccc
Q 013914 82 YKEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
+++.|++++.++.+.++..+. ..+.+.+|+++.+|.+|+|+|.+|+.
T Consensus 241 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 241 LRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 778899999999999998654 25677788889999999999998875
No 244
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.20 E-value=3.4e-06 Score=82.51 Aligned_cols=99 Identities=16% Similarity=0.253 Sum_probs=75.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 81 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
..+++|||+|+.|+.+|..|++. |.+ |+++++.+... + .+... ......+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l---~----------------~~d~~----~~~~l~~~ 244 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGK---VTLCYRNNLIL---R----------------GFDET----IREEVTKQ 244 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCE---EEEEESSSSSC---T----------------TSCHH----HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEEcCCccc---c----------------ccCHH----HHHHHHHH
Confidence 46899999999999999999998 776 99999975421 0 00000 01234566
Q ss_pred HhhcCcEEEcCCeeEEEECCC---CEEEccCCcEEEcceEEEecCCCcccc
Q 013914 82 YKEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 82 ~~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
+++.|++++.++.+.+++.+. ..+.+.+|+++.+|.+|+|+|.+|+..
T Consensus 245 l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 245 LTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp HHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred HHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 778899999999999998653 257777888899999999999988753
No 245
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.20 E-value=2.6e-06 Score=83.13 Aligned_cols=99 Identities=15% Similarity=0.330 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +.+. . .+ .....+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~~~~---------~---~~--------~~~l~~~l~~ 236 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSK---VTVVEFQPQIG---ASMD---------G---EV--------AKATQKFLKK 236 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---SSSC---------H---HH--------HHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEEeCCccc---cccC---------H---HH--------HHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 0000 0 00 1234566778
Q ss_pred cCcEEEcCCeeEEEEC--CCC--EEEcc-----CCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADI--ASK--TLLSA-----TGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~--~~~--~v~~~-----~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++. +.+ .+.+. ++.++.+|.+|+|+|.+|+..
T Consensus 237 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 237 QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 8999999999999986 444 34443 346799999999999988754
No 246
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.19 E-value=1.9e-05 Score=78.76 Aligned_cols=101 Identities=22% Similarity=0.329 Sum_probs=79.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhC------CCeEEEEccCCccCCc------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKIN------NIDVSMVYPEPWCMPR------------------------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~------g~~v~lv~~~~~~~~~------------------------------------ 201 (434)
-.|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999876432100
Q ss_pred --------cC---C--------------HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC------CC---
Q 013914 202 --------LF---T--------------ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK------DG--- 247 (434)
Q Consensus 202 --------~~---~--------------~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~------~g--- 247 (434)
.+ + ..+.+.+.+.+++.||++++++.+.++..++++.+.+|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 1 14566777888889999999999999987556777778776 33
Q ss_pred ------cEEECCEEEEcccCccC
Q 013914 248 ------RTLEADIVVVGVGGRPL 264 (434)
Q Consensus 248 ------~~~~~D~vi~a~G~~p~ 264 (434)
.++.+|.||.|.|....
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCceEEECCEEEEeeCCCch
Confidence 68999999999997654
No 247
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.18 E-value=3.8e-06 Score=82.80 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=74.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhhc
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 85 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.+++|||+|..|+.+|..|++.|.+ |+++++.+... +.+ .. .+ ...+.+.+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~~ 268 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRR---TVMLVRTEPLK---LIK---------DN---ET--------RAYVLDRMKEQ 268 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTT---TCC---------SH---HH--------HHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCe---EEEEEecCccc---ccc---------cH---HH--------HHHHHHHHHhC
Confidence 7899999999999999999999876 99999985421 000 00 00 12345667788
Q ss_pred CcEEEcCCeeEEEECC--C----CEEEccCCc-EEEcceEEEecCCCcccc
Q 013914 86 GIELILSTEIVRADIA--S----KTLLSATGL-IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 86 ~v~~~~~~~v~~i~~~--~----~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 129 (434)
|++++.++.+.++..+ . ..+.+.+|+ ++.+|.+|+|+|.+|+..
T Consensus 269 GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 269 GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 9999999999999863 2 235666776 899999999999998753
No 248
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.18 E-value=1.5e-05 Score=79.43 Aligned_cols=100 Identities=18% Similarity=0.244 Sum_probs=78.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC------------------------------------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------ 200 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~------------------------------------------ 200 (434)
...|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 46899999999999999999999999999998631100
Q ss_pred ---------------------ccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEECCEEE
Q 013914 201 ---------------------RLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVV 256 (434)
Q Consensus 201 ---------------------~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~-~g--~~~~~D~vi 256 (434)
..-...+.+.+.+.+++.|++++.+++|+++..+ ++....|.+. +| .++.+|.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 0001345667778888899999999999999863 4555677776 67 579999999
Q ss_pred EcccCcc
Q 013914 257 VGVGGRP 263 (434)
Q Consensus 257 ~a~G~~p 263 (434)
.|+|...
T Consensus 182 ~AdG~~S 188 (591)
T 3i3l_A 182 DAGGSGG 188 (591)
T ss_dssp ECCGGGC
T ss_pred ECCCCcc
Confidence 9999755
No 249
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.18 E-value=2.2e-06 Score=83.65 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+|+++.+... +.+ .. .+ .....+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~ 238 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSR---LDVVEMMDGLM---QGA---------DR---DL--------VKVWQKQNEY 238 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TTS---------CH---HH--------HHHHHHHHGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCccc---ccc---------CH---HH--------HHHHHHHHHh
Confidence 46899999999999999999999876 99999985421 000 00 00 1234556777
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccC----CcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSAT----GLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~----~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.+++.+.+ .+.+.+ ++++.+|.+++|+|.+|+.
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 8999999999999976543 355555 6678999999999998875
No 250
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.17 E-value=1.1e-05 Score=73.77 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=73.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc---cC--------Cc---cCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW---CM--------PR---LFTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~---~~--------~~---~~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
.++|||+|+.|+.+|..+++.|.+|+++++... ++ +. ...+++.........+.+..+..+.....
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999986531 10 10 12356777777788888888888876665
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
... .. ......+++++.+|.+|+|||.+|...
T Consensus 88 ~~~--~~--~~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDK--GE--YKVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEC--SS--CEEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eee--ec--ceeeccCCeEEEeceeEEcccCccCcC
Confidence 554 22 234556778999999999999877543
No 251
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.17 E-value=3.6e-06 Score=81.71 Aligned_cols=99 Identities=16% Similarity=0.152 Sum_probs=73.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-+|..|++.|.+ |+++++.+... + .+... ......+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~----------------~~~~~----~~~~l~~~l~~ 224 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVD---VTIVEFLPRAL---P----------------NEDAD----VSKEIEKQFKK 224 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---T----------------TSCHH----HHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEEcCCccc---c----------------ccCHH----HHHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 0 00000 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEcc-CC--cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSA-TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~-~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..+.. .+.+. ++ .++.+|.+++|+|.+|+..
T Consensus 225 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 225 LGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp HTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCS
T ss_pred cCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCC
Confidence 8999999999999986553 34443 55 5799999999999988653
No 252
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.17 E-value=4.6e-06 Score=81.53 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+|+|||||+.|+.+|..|++.|.+ |+++++.+...- . .+ .. .+ .....+.+++
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~------~-~~----~~---~~--------~~~l~~~l~~ 248 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKE---VVLIDVVDTCLA------G-YY----DR---DL--------TDLMAKNMEE 248 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTT------T-TS----CH---HH--------HHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEEcccchhh------h-HH----HH---HH--------HHHHHHHHHh
Confidence 47899999999999999999999876 999999854210 0 00 00 00 1234556777
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+.+ .+.+ ++.++.+|.+|+|+|.+|+..
T Consensus 249 ~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 249 HGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp TTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 8999999999999986443 3444 667899999999999988654
No 253
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.17 E-value=4.3e-06 Score=81.46 Aligned_cols=100 Identities=14% Similarity=0.227 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... + . .+... ......+.+++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~---~------------~~~~~----~~~~l~~~l~~ 232 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGAD---VTAVEFLGHVG---G---V------------GIDME----ISKNFQRILQK 232 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---C---S------------SCCHH----HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEeccCccC---C---c------------ccCHH----HHHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 0 0 00000 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCC---EEE-----ccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK---TLL-----SATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~-----~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+.. .+. ..++.++.+|.+|+|+|.+|+..
T Consensus 233 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 233 QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 8999999999999987653 233 23556899999999999988653
No 254
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.16 E-value=4.5e-06 Score=82.06 Aligned_cols=98 Identities=11% Similarity=0.022 Sum_probs=75.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+-.|..+++.|.+ |+|++++...+. +... ........+++
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~---VTii~~~~~L~~--------------------~D~e----i~~~l~~~l~~ 275 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYD---VTVAVRSIVLRG--------------------FDQQ----CAVKVKLYMEE 275 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCC---EEEEESSCSSTT--------------------SCHH----HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCe---EEEecccccccc--------------------cchh----HHHHHHHHHHh
Confidence 47899999999999999999999987 999987643211 0000 01234566788
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.+..+..+...... +.+.++.++.+|.+++|+|-+|+..
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 99999999999888776654 4556777899999999999988754
No 255
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.16 E-value=9.5e-06 Score=75.35 Aligned_cols=94 Identities=16% Similarity=0.205 Sum_probs=69.7
Q ss_pred cEEEECCCHHHHHHHHHHHh---CCCeEEEEccCCccCCc-------------------cC---CH---HH---------
Q 013914 165 KAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR-------------------LF---TA---DI--------- 207 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~---~g~~v~lv~~~~~~~~~-------------------~~---~~---~~--------- 207 (434)
+|+|||+|..|+-+|..|.+ .|.+|+++++.+.+..+ ++ +. .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 99999999976432110 00 00 11
Q ss_pred -----------------------------HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEc
Q 013914 208 -----------------------------AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVG 258 (434)
Q Consensus 208 -----------------------------~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a 258 (434)
...+..+.++.|++++++++|+++..++++ ..+.+.+|+++.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEEC
Confidence 112223344458999999999999984444 4688888987899999999
Q ss_pred cc
Q 013914 259 VG 260 (434)
Q Consensus 259 ~G 260 (434)
++
T Consensus 161 ~p 162 (342)
T 3qj4_A 161 MP 162 (342)
T ss_dssp SC
T ss_pred CC
Confidence 98
No 256
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.16 E-value=5.9e-06 Score=80.97 Aligned_cols=98 Identities=15% Similarity=0.255 Sum_probs=74.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +.+ .. .+ .....+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~---------d~---~~--------~~~l~~~l~~ 235 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVP---VTVVASQDHVL---PYE---------DA---DA--------ALVLEESFAE 235 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCC---EEEECSSSSSS---CCS---------SH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCccc---ccc---------CH---HH--------HHHHHHHHHH
Confidence 46899999999999999999999876 99999885421 000 00 00 1234566778
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.|.++..+.. .+.+.++.++.+|.+|+|+|.+|+.
T Consensus 236 ~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 236 RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 8999999999999987653 3455677789999999999998875
No 257
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.14 E-value=3.9e-06 Score=83.65 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=72.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCCc----------cC-C--HHHHHHHHHHHHhcCcEEEcCCeE
Q 013914 164 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR----------LF-T--ADIAAFYEGYYANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~~~----------~~-~--~~~~~~~~~~l~~~GV~~~~~~~v 228 (434)
++++|||+|+.|+.+|..|++. +.+|+++++.+.+.-. .+ + ..+.+......++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5799999999999999999998 7999999998764210 00 0 011222344455689999999999
Q ss_pred EEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013914 229 VGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~-~~g~--~~~~D~vi~a~G~~p~~~ 266 (434)
.+++. +++...+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 82 ~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDR--AAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99986 333334433 3354 789999999999877643
No 258
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.14 E-value=1.8e-05 Score=78.85 Aligned_cols=101 Identities=24% Similarity=0.295 Sum_probs=77.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc-----------------------------------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 201 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~----------------------------------------- 201 (434)
...|+|||+|+.|+.+|..+.+.|.+|+++++.+.+...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 358999999999999999999999999999886533100
Q ss_pred --------------------------------------c--------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013914 202 --------------------------------------L--------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 235 (434)
Q Consensus 202 --------------------------------------~--------~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~ 235 (434)
. ....+.+.+.+.+++.||+++++++++++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 0 012344566777788999999999999998633
Q ss_pred CCcEEEEEeC--CCc--EEECCEEEEcccCcc
Q 013914 236 DGEVKEVKLK--DGR--TLEADIVVVGVGGRP 263 (434)
Q Consensus 236 ~g~v~~v~~~--~g~--~~~~D~vi~a~G~~p 263 (434)
++++.+|.+. +|+ ++.+|.||+|+|..+
T Consensus 286 ~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 286 SGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp -CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3777777665 664 688999999999544
No 259
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.13 E-value=3.2e-05 Score=70.42 Aligned_cols=166 Identities=15% Similarity=0.136 Sum_probs=102.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCCcc-------------------------------------C
Q 013914 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL-------------------------------------F 203 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~~~~-------------------------------------~ 203 (434)
...++|||+|+.|+.+|..|++. |.+|+++++.+.+.... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 45899999999999999999998 99999999865432100 0
Q ss_pred CHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecC--C-C--cEEEEEeC--------------CCcEEEC-----------
Q 013914 204 TADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNA--D-G--EVKEVKLK--------------DGRTLEA----------- 252 (434)
Q Consensus 204 ~~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~--~-g--~v~~v~~~--------------~g~~~~~----------- 252 (434)
..++...+.+.+.+ .||+++.++++.++..++ + + ++.++.+. ++.++.+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 23445566666666 499999999999998743 3 4 77777652 3457999
Q ss_pred ----CEEEEcccCccCh-hhhhccc-cc-cC----Cc----------EEeCCCCCC-CCCcEEEecccccccccccCcce
Q 013914 253 ----DIVVVGVGGRPLI-SLFKGQV-AE-NK----GG----------IETDDFFKT-SADDVYAVGDVATFPMKLYREMR 310 (434)
Q Consensus 253 ----D~vi~a~G~~p~~-~~~~~~~-~~-~~----g~----------i~vd~~~~t-~~~~iya~GD~~~~~~~~~~~~~ 310 (434)
+.||.|+|..... .++..-+ .. .. |- ..|+..-.. -+|++|++|-.+..... .+
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~- 300 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDG---LN- 300 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHT---CC-
T ss_pred cccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcC---CC-
Confidence 9999999966433 2221100 00 00 10 111122221 58999999987642211 00
Q ss_pred ec-ccHHHHHHHHHHHHHHHhcc
Q 013914 311 RV-EHVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 311 ~~-~~~~~A~~~g~~aa~~i~~~ 332 (434)
++ +....-...|+.||+.|+..
T Consensus 301 r~g~~fg~m~~sg~~~a~~~~~~ 323 (326)
T 2gjc_A 301 RMGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp BCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCChhhhhhhhhhHHHHHHHHHH
Confidence 11 12222235788888877653
No 260
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.13 E-value=1.6e-05 Score=78.97 Aligned_cols=99 Identities=15% Similarity=0.298 Sum_probs=75.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-cC-----------------------Cc------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~-~~-----------------------~~------------------ 201 (434)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 4799999999999999999999999999987631 10 00
Q ss_pred -----------cCC-HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 202 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 202 -----------~~~-~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
..+ ..+.+.+.+.+++ .|++++.+ .|..+.. +++.+.+|.+.+|+++.+|.||+|+|..++
T Consensus 102 ~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 011 1445566777777 49999654 7888876 356677788999999999999999997654
No 261
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.12 E-value=5.6e-06 Score=80.10 Aligned_cols=99 Identities=17% Similarity=0.293 Sum_probs=72.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+...- + . + .. .+ .....+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~-~-~-----~----~~---~~--------~~~l~~~l~~ 203 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERVLY-K-Y-----F----DK---EF--------TDILAKDYEA 203 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSTTT-T-T-----S----CH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCchhh-h-h-----h----hh---hH--------HHHHHHHHHH
Confidence 46899999999999999999998876 999998754210 0 0 0 00 00 1234566778
Q ss_pred cCcEEEcCCeeEEEECCCCE---EEccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.++.. +.+ ++.++.+|.+|+|+|.+|+..
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECCG
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCHH
Confidence 89999999999999863332 333 677899999999999988753
No 262
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.12 E-value=5.3e-06 Score=80.62 Aligned_cols=99 Identities=18% Similarity=0.290 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH-h
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-K 83 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 83 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... +.. .. .+ .....+.+ +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~---------d~---~~--------~~~l~~~l~~ 227 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAE---VTVVEFAPRCA---PTL---------DE---DV--------TNALVGALAK 227 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCE---EEEEecCCccc---ccC---------CH---HH--------HHHHHHHHhh
Confidence 46899999999999999999999876 99999985421 000 00 00 12345567 7
Q ss_pred hcCcEEEcCCeeEEEECCCC--EEEcc--CC--cEEEcceEEEecCCCcccc
Q 013914 84 EKGIELILSTEIVRADIASK--TLLSA--TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~--~v~~~--~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
+.|++++.++.+.+++.+.. .+.+. +| .++.+|.+++|+|.+|+..
T Consensus 228 ~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp HTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred cCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 88999999999999987653 34443 55 5799999999999988653
No 263
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.12 E-value=1.2e-05 Score=76.53 Aligned_cols=100 Identities=25% Similarity=0.353 Sum_probs=75.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc----------------------------------------
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 201 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~---------------------------------------- 201 (434)
+..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999987542100
Q ss_pred --c---C-----------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcc
Q 013914 202 --L---F-----------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGV 259 (434)
Q Consensus 202 --~---~-----------------~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~ 259 (434)
. + ...+.+.+.+.+++ ++++++++|++++.++++ ..+++.+|+++.+|+||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcCCCEEeeCEEEECC
Confidence 0 0 01234445555544 889999999999874433 56888999999999999999
Q ss_pred cCccCh
Q 013914 260 GGRPLI 265 (434)
Q Consensus 260 G~~p~~ 265 (434)
|.....
T Consensus 178 G~~S~v 183 (407)
T 3rp8_A 178 GSHSAL 183 (407)
T ss_dssp CTTCSS
T ss_pred CcChHH
Confidence 976544
No 264
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=3.5e-06 Score=82.02 Aligned_cols=99 Identities=17% Similarity=0.345 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +.. .. .+ .....+.+++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~ 230 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSE---VTVVEFASEIV---PTM---------DA---EI--------RKQFQRSLEK 230 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCE---EEEECSSSSSS---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCccc---ccc---------cH---HH--------HHHHHHHHHH
Confidence 46899999999999999999999876 99999985421 000 00 00 1234566778
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEcc---CC--cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSA---TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~---~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.+++.+.. .+.+. ++ .++.+|.+++|+|.+|+..
T Consensus 231 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 231 QGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp SSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred cCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 8999999999999987653 33433 44 5799999999999988653
No 265
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.10 E-value=1.8e-06 Score=83.35 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=70.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc-------CCc-cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-------MPR-LFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~-------~~~-~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~ 233 (434)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .+. .++.++.+...+.+++.||++++++.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 197 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR--- 197 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc---
Confidence 3578999999999999999999999999999998764 222 14677888888899999999999986521
Q ss_pred cCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 234 NADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 234 ~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
.+.++++ .+++|.|++|+|..
T Consensus 198 -------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 -------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp -------TBCHHHH-HSSCSEEEECCCCC
T ss_pred -------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222222 35699999999975
No 266
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.08 E-value=1.4e-05 Score=75.80 Aligned_cols=101 Identities=20% Similarity=0.278 Sum_probs=71.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc----cC---C---HHHH-----------------------
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----LF---T---ADIA----------------------- 208 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~----~~---~---~~~~----------------------- 208 (434)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..+ .+ + ..+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 3468999999999999999999999999999987643211 00 0 0000
Q ss_pred -----------------------HHHHHHHHh--cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 209 -----------------------AFYEGYYAN--KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 209 -----------------------~~~~~~l~~--~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
..+.+.|.+ .+++++++++|++++.++++ ..+++.+|+++.+|.||.|.|...
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK--WTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS--EEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE--EEEEECCCcEEecCEEEECCCcch
Confidence 011222221 13578899999999874433 468889998899999999999755
Q ss_pred C
Q 013914 264 L 264 (434)
Q Consensus 264 ~ 264 (434)
.
T Consensus 183 ~ 183 (398)
T 2xdo_A 183 K 183 (398)
T ss_dssp S
T ss_pred h
Confidence 4
No 267
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.08 E-value=8.7e-06 Score=79.46 Aligned_cols=99 Identities=21% Similarity=0.271 Sum_probs=75.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+..|..|++.|.+ |+++++.+... + .+... ....+.+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l---~----------------~~~~~----~~~~l~~~l~~ 244 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVK---TTLLHRGDLIL---R----------------NFDYD----LRQLLNDAMVA 244 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---T----------------TSCHH----HHHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCe---EEEEECCCccc---c----------------ccCHH----HHHHHHHHHHH
Confidence 46899999999999999999998876 99999875421 0 00000 01234556677
Q ss_pred cCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..+.. .+.+.+++++.+|.+|+|+|.+|+..
T Consensus 245 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 8999999999999987654 46677888899999999999887654
No 268
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.08 E-value=1.4e-06 Score=84.68 Aligned_cols=40 Identities=30% Similarity=0.422 Sum_probs=34.5
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 220 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 220 V~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
++++++++|++|+.++++ ..|++.+|+++.+|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCH
Confidence 799999999999885444 5788899989999999999984
No 269
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.07 E-value=3.1e-05 Score=76.05 Aligned_cols=100 Identities=18% Similarity=0.229 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------Cc----------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR---------------------------------- 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~--------~~---------------------------------- 201 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... +.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999999875100 00
Q ss_pred -------------------cC-CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE--eCCCc--EEECCEEEE
Q 013914 202 -------------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK--LKDGR--TLEADIVVV 257 (434)
Q Consensus 202 -------------------~~-~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~--~~~g~--~~~~D~vi~ 257 (434)
.+ ...+.+.+.+.+++.||+++.+++|+++.. +++.+.++. ..+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 00 124556777778889999999999999987 455554444 45674 799999999
Q ss_pred cccCccC
Q 013914 258 GVGGRPL 264 (434)
Q Consensus 258 a~G~~p~ 264 (434)
|+|....
T Consensus 167 AdG~~S~ 173 (512)
T 3e1t_A 167 ASGNRTR 173 (512)
T ss_dssp CCCTTCS
T ss_pred CCCcchH
Confidence 9997543
No 270
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.06 E-value=2.6e-05 Score=73.17 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 206 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 206 ~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
.+.+.+.+.+++.|++++.+++|+++..++++ ..+.+.+| ++.+|.||+|+|..
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCcc
Confidence 34455667778889999999999999874333 46777887 59999999999953
No 271
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.06 E-value=2.5e-06 Score=82.59 Aligned_cols=40 Identities=25% Similarity=0.308 Sum_probs=35.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
|+++++||+|||||++||+||..|++.|.+ |+|+|+++..
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~ 40 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLS---VAVIEARDRV 40 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCCC
Confidence 666679999999999999999999999987 9999998764
No 272
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.05 E-value=2e-05 Score=77.93 Aligned_cols=99 Identities=23% Similarity=0.265 Sum_probs=76.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------------- 199 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~-------------------------------------------- 199 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999864220
Q ss_pred -------------------------Cc---cC-CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc--EEEEEeCCC-
Q 013914 200 -------------------------PR---LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE--VKEVKLKDG- 247 (434)
Q Consensus 200 -------------------------~~---~~-~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~--v~~v~~~~g- 247 (434)
+. .+ ...+.+.+.+.+++.|+++++++++++++.++++. ...+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 00 00 12456677788888899999999999998744411 245666665
Q ss_pred --cEEECCEEEEcccCc
Q 013914 248 --RTLEADIVVVGVGGR 262 (434)
Q Consensus 248 --~~~~~D~vi~a~G~~ 262 (434)
.++.+|.||.|.|..
T Consensus 166 ~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNR 182 (535)
T ss_dssp EEEEEEEEEEEECCCTT
T ss_pred CeEEEEeCEEEECCCCc
Confidence 689999999999964
No 273
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.05 E-value=1.1e-05 Score=78.92 Aligned_cols=98 Identities=12% Similarity=0.180 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+... +... . .+ .....+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l---~~~d---------~---~~--------~~~l~~~l~~ 227 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVI---VKVFGRSGSVA---NLQD---------E---EM--------KRYAEKTFNE 227 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCE---EEEECCTTCCT---TCCC---------H---HH--------HHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCccc---ccCC---------H---HH--------HHHHHHHHhh
Confidence 46899999999999999999999876 99999986421 0000 0 00 1123344555
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEcc--CC--cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSA--TG--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~--~~--~~~~~d~lvlAtG~~~~~~ 129 (434)
. ++++.++.+..+..+... +.+. +| .++.+|.+++|+|.+|+..
T Consensus 228 ~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 277 (492)
T 3ic9_A 228 E-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVD 277 (492)
T ss_dssp T-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCS
T ss_pred C-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCC
Confidence 5 999999999999765543 3433 56 6799999999999988654
No 274
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.05 E-value=5.1e-06 Score=81.26 Aligned_cols=101 Identities=13% Similarity=0.273 Sum_probs=69.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc---------cCC-HHHHHHHHHHH--HhcCcEEEcCCeEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------LFT-ADIAAFYEGYY--ANKGIKIIKGTVAVG 230 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~---------~~~-~~~~~~~~~~l--~~~GV~~~~~~~v~~ 230 (434)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.-. .++ .++...+.+.+ ++.+++++.+ ++++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~ 120 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATS 120 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEE
Confidence 358999999999999999999999999999998764211 011 11112233332 3457888765 5788
Q ss_pred EEecCCCcEEEEE------------------eCCCcEEECCEEEEcccCccChh
Q 013914 231 FTTNADGEVKEVK------------------LKDGRTLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 231 i~~~~~g~v~~v~------------------~~~g~~~~~D~vi~a~G~~p~~~ 266 (434)
|+. +.+...+. ..++.++++|.+|+|+|.+|+..
T Consensus 121 ID~--~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 121 INP--DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEG--GGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEh--hhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 876 33322332 13466899999999999988764
No 275
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.04 E-value=3e-06 Score=85.77 Aligned_cols=35 Identities=29% Similarity=0.424 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-----cCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAK-----QGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~-----~g~~~~~V~vie~~~~ 42 (434)
.+||+|||||++||++|..|++ .|.+ |+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCCCC
Confidence 5799999999999999999999 8987 999999764
No 276
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.04 E-value=2.8e-06 Score=83.57 Aligned_cols=53 Identities=13% Similarity=0.122 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
..+.+.+.+.+++.|++++++++|++|.. ++. .+++.+|+++.+|.||+++..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~--~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNA--NNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEET--TTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEc--cCC--EEEEcCCCEEECCEEEECCCH
Confidence 45667777778889999999999999987 332 467899999999999998874
No 277
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.03 E-value=2e-05 Score=78.23 Aligned_cols=98 Identities=24% Similarity=0.321 Sum_probs=76.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------------------------------------Cc-----
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------PR----- 201 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~-------------------------------------~~----- 201 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999753211 00
Q ss_pred --------------cC-CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe--CCC-cEEECCEEEEcccCcc
Q 013914 202 --------------LF-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL--KDG-RTLEADIVVVGVGGRP 263 (434)
Q Consensus 202 --------------~~-~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~--~~g-~~~~~D~vi~a~G~~p 263 (434)
.+ ...+.+.+.+.+++.|++++.+++|++++.++++ ..+++ .+| +++.+|+||.|.|...
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA--VEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC--EEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--EEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 00 1345677778888889999999999999875555 34555 788 6899999999999754
No 278
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.03 E-value=4.9e-06 Score=80.47 Aligned_cols=60 Identities=17% Similarity=0.086 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC-CCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNA-DGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~-~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
...+.+.+.+.+++.|++++++++|++|..+. ++++..|.+ +|+++.||.||+|+|..|.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 34788888899999999999999999998742 566667776 4778999999999997643
No 279
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.02 E-value=1.1e-05 Score=78.71 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=71.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCC-cc-C----------CHHHHHHHHHHH-HhcCcEEEcCCeE
Q 013914 164 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP-RL-F----------TADIAAFYEGYY-ANKGIKIIKGTVA 228 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~~-~~-~----------~~~~~~~~~~~l-~~~GV~~~~~~~v 228 (434)
.+++|||+|+.|+.+|..|++. |.+|+++++.+.+.. .. + ..++.....+.+ ++.|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 5899999999999999999986 899999998765311 00 0 011111223444 4459999999999
Q ss_pred EEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013914 229 VGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 266 (434)
Q Consensus 229 ~~i~~~~~g~v~~v~~-~~g~--~~~~D~vi~a~G~~p~~~ 266 (434)
..++. +.+...+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 117 ~~i~~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 117 TKVDT--EKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 99976 333334443 4576 799999999999877643
No 280
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.02 E-value=1.2e-05 Score=78.06 Aligned_cols=96 Identities=19% Similarity=0.269 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+... + .. . .+ .....+.+++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~-~~---------~---~~--------~~~l~~~l~~ 228 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSK---VTVLARNTLFF---R-ED---------P---AI--------GEAVTAAFRA 228 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTT---T-SC---------H---HH--------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEEECCccC---C-CC---------H---HH--------HHHHHHHHHh
Confidence 46899999999999999999999876 99999875411 0 00 0 00 1234566778
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEccCCcEEEcceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+.+++.+... +.+. +.++.+|.+|+|+|..|+.
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 89999999999999765543 4444 4579999999999998864
No 281
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.01 E-value=1.5e-05 Score=77.34 Aligned_cols=98 Identities=21% Similarity=0.188 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+..|..+++.|.+ |+++++.+... +.+ .. .+ ...+.+.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vt~v~~~~~~l---~~~---------~~---~~--------~~~l~~~l~~ 223 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVK---TTLIYRGKEIL---SRF---------DQ---DM--------RRGLHAAMEE 223 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS---TTS---------CH---HH--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCccc---ccc---------CH---HH--------HHHHHHHHHH
Confidence 46899999999999999999998876 99999875321 000 00 00 1234556778
Q ss_pred cCcEEEcCCeeEEEECCC-C--EEE-ccCCcEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIAS-K--TLL-SATGLIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~-~--~v~-~~~~~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..+. . .+. +.+|+ +.+|.+|+|+|.+|+..
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 899999999999998753 2 567 77887 99999999999887654
No 282
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.98 E-value=2.2e-05 Score=76.39 Aligned_cols=99 Identities=13% Similarity=0.233 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-.|..|++.|.+ |+++++.+... + .+... ......+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l---~----------------~~~~~----~~~~l~~~l~~ 233 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAE---VTVLEAMDKFL---P----------------AVDEQ----VAKEAQKILTK 233 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS---T----------------TSCHH----HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEecCCCcC---c----------------ccCHH----HHHHHHHHHHh
Confidence 46899999999999999999999876 99999985421 0 00000 01234556778
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEccCC---cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSATG---LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~~---~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..+... +.+.++ .++.+|.+++|+|.+|+..
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 89999999999999866543 444443 5789999999999888653
No 283
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.98 E-value=5.8e-05 Score=69.13 Aligned_cols=166 Identities=14% Similarity=0.092 Sum_probs=101.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCCc---------------------------------c----C
Q 013914 163 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR---------------------------------L----F 203 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~~~~---------------------------------~----~ 203 (434)
...++|||+|+.|+.+|..|++. |.+|+++++.+.+... + .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 45899999999999999999997 9999999987543200 0 0
Q ss_pred CHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCC----------------C--cEEEEEeC--------------CCcEE
Q 013914 204 TADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNAD----------------G--EVKEVKLK--------------DGRTL 250 (434)
Q Consensus 204 ~~~~~~~~~~~l~~-~GV~~~~~~~v~~i~~~~~----------------g--~v~~v~~~--------------~g~~~ 250 (434)
..++.+.+.+.+++ .|++++.++.+.++..+++ + ++.++... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 23445666666777 5999999999999876332 3 66666542 23479
Q ss_pred ECCEEEEcccCccCh-hhh-----hccccc-cCCcEEeC----------CCCCCCCCcEEEecccccccccccCcceecc
Q 013914 251 EADIVVVGVGGRPLI-SLF-----KGQVAE-NKGGIETD----------DFFKTSADDVYAVGDVATFPMKLYREMRRVE 313 (434)
Q Consensus 251 ~~D~vi~a~G~~p~~-~~~-----~~~~~~-~~g~i~vd----------~~~~t~~~~iya~GD~~~~~~~~~~~~~~~~ 313 (434)
.++.||.|+|..... .++ ..++.. -.|.-..+ .+-+ -+|++|++|=.+.-.. |.++--+
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~-v~~gl~~~gm~~~~~~---g~~rmgp 314 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTRE-IVPGLIVGGMELSEID---GANRMGP 314 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEE-EETTEEECGGGHHHHH---TCEECCS
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCce-EcCCEEEechhhHhhc---CCCCCCc
Confidence 999999999976542 111 112211 11211111 1112 2799999996654211 1111112
Q ss_pred cHHHHHHHHHHHHHHHhcc
Q 013914 314 HVDHARKSAEQAVKTIMAT 332 (434)
Q Consensus 314 ~~~~A~~~g~~aa~~i~~~ 332 (434)
....=...|+.||+-|+..
T Consensus 315 ~fg~m~~sg~~~a~~~~~~ 333 (344)
T 3jsk_A 315 TFGAMALSGVKAAHEAIRV 333 (344)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred ccceeeecCHHHHHHHHHH
Confidence 2222235778888777654
No 284
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.98 E-value=6.8e-06 Score=78.76 Aligned_cols=54 Identities=22% Similarity=0.236 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
....+....+.++.+.+++++++|++|..+ ++.+ .|++.+|+ +.+|.||+|++.
T Consensus 203 ~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 203 DGTQAMFEHLNATLEHPAERNVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPL 256 (424)
T ss_dssp TCHHHHHHHHHHHSSSCCBCSCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCH
T ss_pred ChHHHHHHHHHHhhcceEEcCCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCH
Confidence 334555555566667788999999999874 3344 48888884 899999999984
No 285
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.98 E-value=4e-06 Score=82.63 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAVAP 44 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~~~~ 44 (434)
++.+||+|||||++||+||..|++.| .+ |+|+|+++..+
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~---V~VlEa~~riG 45 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQD---CLVLEARDRVG 45 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCS---EEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCC---EEEEeCCCCCC
Confidence 34689999999999999999999999 76 99999997643
No 286
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.98 E-value=9.3e-06 Score=79.37 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ----GVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 80 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~----g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
..+|+|||||+.|+-+|..|++. |.+ |+++++.+... .+ .++.. ......+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~---V~~v~~~~~~~-~~--------------~l~~~-------~~~~~~~ 234 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTE---VIQLFPEKGNM-GK--------------ILPEY-------LSNWTME 234 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCE---EEEECSSSSTT-TT--------------TSCHH-------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCE---EEEEecCcccc-cc--------------cCCHH-------HHHHHHH
Confidence 46899999999999999999873 444 99998764310 00 00000 0123345
Q ss_pred hHhhcCcEEEcCCeeEEEECCCC--EEEccCCcEEEcceEEEecCCCccc
Q 013914 81 WYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 128 (434)
Q Consensus 81 ~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~ 128 (434)
.+++.|++++.++.+.+++.+.. .+.+.+|+++.+|.+|+|+|.+|+.
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 67778999999999999875443 4667788899999999999998864
No 287
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.94 E-value=8.3e-06 Score=77.43 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~~~~V~vie~~~~~ 43 (434)
+++||+|||||++|++||..|++. |.+ |+|+|+++..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~---v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKR---VLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCC---EEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCC---EEEEeCCCCC
Confidence 368999999999999999999998 886 9999999764
No 288
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.94 E-value=1.1e-05 Score=78.77 Aligned_cols=98 Identities=16% Similarity=0.112 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++....+. +... ......+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~~--------------------~d~~----~~~~l~~~l~~ 239 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYE---PTVMVRSIVLRG--------------------FDQQ----MAELVAASMEE 239 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCSSTT--------------------SCHH----HHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCCCcc--------------------cCHH----HHHHHHHHHHh
Confidence 46899999999999999999999876 999988532110 0000 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCC---EEEccCCc-----EEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK---TLLSATGL-----IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~---~v~~~~~~-----~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..... .+.+.++. ++.+|.+++|+|.+|+..
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 8999999999999876432 35554443 789999999999888653
No 289
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.94 E-value=4.2e-05 Score=74.21 Aligned_cols=97 Identities=16% Similarity=0.154 Sum_probs=70.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc------------------------------CCH-HH------
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL------------------------------FTA-DI------ 207 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~------------------------------~~~-~~------ 207 (434)
.++|||+|+.|+.+|..|++.|.+|+++++.+.+...+ ++- .+
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKDY 85 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHHh
Confidence 68999999999999999999999999999766432110 010 00
Q ss_pred ----H--HHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE--EECCEEEEcccCccChh
Q 013914 208 ----A--AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT--LEADIVVVGVGGRPLIS 266 (434)
Q Consensus 208 ----~--~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~--~~~D~vi~a~G~~p~~~ 266 (434)
. ..+...+++.||+++.+ .+..++. + ...+.+.+|++ +.+|.+|+|+|.+|...
T Consensus 86 ~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~--~--~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 86 VQELRFKQHKRNMSQYETLTFYKG-YVKIKDP--T--HVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESE-EEEEEET--T--EEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred heeccccchHHHHHHhCCCEEEEe-EEEEecC--C--eEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 1 33445566789999887 4666643 2 35677888888 99999999999877643
No 290
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.94 E-value=2.3e-05 Score=76.64 Aligned_cols=99 Identities=18% Similarity=0.253 Sum_probs=72.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||+.|+.+|..|++.|.+ |+++++.+.... .+... ......+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~-------------------~~d~~----~~~~l~~~l~~ 251 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAK---VTVVEFLDTILG-------------------GMDGE----VAKQLQRMLTK 251 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSSS-------------------SSCHH----HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEeccccccc-------------------cCCHH----HHHHHHHHHHh
Confidence 46899999999999999999999876 999998754210 00000 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCCE--EEccC---C--cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASKT--LLSAT---G--LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~--v~~~~---~--~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..+... +.+.+ | .++.+|.+|+|+|.+|+..
T Consensus 252 ~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~ 303 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTD 303 (491)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCT
T ss_pred CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCC
Confidence 89999999999998765543 44432 4 5799999999999988653
No 291
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.92 E-value=1.3e-05 Score=78.21 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-+|..|++.|.+ |+++++.+... + .+... ......+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l---~----------------~~d~~----~~~~~~~~l~~ 240 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSK---TSLMIRHDKVL---R----------------SFDSM----ISTNCTEELEN 240 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC---T----------------TSCHH----HHHHHHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCe---EEEEEeCCccc---c----------------ccCHH----HHHHHHHHHHH
Confidence 46899999999999999999999876 99999875421 0 00000 01234566778
Q ss_pred cCcEEEcCCeeEEEECCCC----EEEccC---C----cEEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIASK----TLLSAT---G----LIFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~----~v~~~~---~----~~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+.++..... .+.+.+ + .++.+|.+++|+|.+|+..
T Consensus 241 ~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 241 AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 8999999999999876432 244443 2 5789999999999888654
No 292
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.90 E-value=7.6e-05 Score=72.95 Aligned_cols=100 Identities=23% Similarity=0.388 Sum_probs=77.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc----------------------------------------
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 201 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~---------------------------------------- 201 (434)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3468999999999999999999999999999875332100
Q ss_pred ------cC-------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc---EEECCEEEEcccCcc
Q 013914 202 ------LF-------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR---TLEADIVVVGVGGRP 263 (434)
Q Consensus 202 ------~~-------~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~---~~~~D~vi~a~G~~p 263 (434)
.. ...+.+.+.+.+++.|+++++++++++++.++++ ..+++.+++ ++.+|.||.|.|...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH--VVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC--EEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--EEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00 1345667777788889999999999999885444 357777764 799999999999754
No 293
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.89 E-value=3.8e-05 Score=73.15 Aligned_cols=100 Identities=19% Similarity=0.216 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe-EEEEccCCccCCcc---------------------------------------
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNID-VSMVYPEPWCMPRL--------------------------------------- 202 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~-v~lv~~~~~~~~~~--------------------------------------- 202 (434)
...|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999999 99999865431100
Q ss_pred ---------------------CCHHHHHHHHHHHHh-cC-cEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCE
Q 013914 203 ---------------------FTADIAAFYEGYYAN-KG-IKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADI 254 (434)
Q Consensus 203 ---------------------~~~~~~~~~~~~l~~-~G-V~~~~~~~v~~i~~~~~g~v~~v~~~~---g--~~~~~D~ 254 (434)
....+.+.+.+.+++ .| ++++++++|+++.. +++ ..+++.+ | +++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecCCCCCceEEecCE
Confidence 001345566666665 36 68999999999987 455 3455554 7 5789999
Q ss_pred EEEcccCccCh
Q 013914 255 VVVGVGGRPLI 265 (434)
Q Consensus 255 vi~a~G~~p~~ 265 (434)
||.|.|.....
T Consensus 161 vV~AdG~~S~v 171 (410)
T 3c96_A 161 LVGADGIHSAV 171 (410)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCccchh
Confidence 99999976544
No 294
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.89 E-value=1.1e-05 Score=78.90 Aligned_cols=39 Identities=28% Similarity=0.439 Sum_probs=34.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
+++.+||+|||||++||+||..|++.|.+ |+|+|+++..
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~~~~ 46 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEARTRP 46 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeccCCC
Confidence 34568999999999999999999999886 9999999764
No 295
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.88 E-value=1.3e-05 Score=75.46 Aligned_cols=37 Identities=27% Similarity=0.582 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||+|||||++|+++|..|++.|.+ |+|+|+++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~---v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQR---VLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCc---eEEEeccCCC
Confidence 468999999999999999999999887 9999998754
No 296
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.86 E-value=0.00014 Score=71.13 Aligned_cols=101 Identities=22% Similarity=0.338 Sum_probs=77.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc----------------------c-----------------
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------L----------------- 202 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~----------------------~----------------- 202 (434)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 3468999999999999999999999999999876432100 0
Q ss_pred -------------C-CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc---EEECCEEEEcccCccC
Q 013914 203 -------------F-TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR---TLEADIVVVGVGGRPL 264 (434)
Q Consensus 203 -------------~-~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~---~~~~D~vi~a~G~~p~ 264 (434)
+ ...+.+.+.+.+++.|+++++++++++++.++++ ..+++.+++ ++.+|.||.|.|....
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG--VTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--EEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 0 1245667777788889999999999999874443 346676664 7999999999997543
No 297
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.86 E-value=2.8e-05 Score=75.96 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-.|..|++.|.+ |+++++....+. +... ......+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~l~~--------------------~d~~----~~~~l~~~l~~ 237 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLD---TTVMMRSIPLRG--------------------FDQQ----MSSLVTEHMES 237 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT--------------------SCHH----HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEcCccccc--------------------CCHH----HHHHHHHHHHH
Confidence 46799999999999999999999876 999998632110 0000 01234566778
Q ss_pred cCcEEEcCCeeEEEECC-CC--EEEccC---Cc--EEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIA-SK--TLLSAT---GL--IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~-~~--~v~~~~---~~--~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+..+... .. .+.+.+ ++ ++.+|.+++|+|-+|+..
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 89999999888888652 22 344433 44 478999999999888654
No 298
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.86 E-value=1.3e-05 Score=74.80 Aligned_cols=38 Identities=16% Similarity=0.316 Sum_probs=33.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC-CCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-AVA 43 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~-~~~ 43 (434)
...+||+|||||++||+||..|++.|++ |+|+|++ +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD---VTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc---EEEEecccccc
Confidence 3468999999999999999999999986 9999998 653
No 299
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.85 E-value=9.1e-06 Score=78.01 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++||+|||||++|+++|..|+++|++ |+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCCC
Confidence 47999999999999999999999987 99999986
No 300
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.85 E-value=2.2e-05 Score=76.76 Aligned_cols=99 Identities=19% Similarity=0.288 Sum_probs=70.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc---------C---CHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL---------F---TADIAAFYEGYYANKGIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~---------~---~~~~~~~~~~~l~~~GV~~~~~~~v~~i 231 (434)
.+++|||+|+.|+.+|..|.+. .+|+++++.+.+.... + ..++...+.+.+ +.++++++++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4799999999999999999999 9999999877552110 1 123333333334 669999999999888
Q ss_pred EecCCCcEEEEEeCCCc--EEECCEEEEcccCccCh
Q 013914 232 TTNADGEVKEVKLKDGR--TLEADIVVVGVGGRPLI 265 (434)
Q Consensus 232 ~~~~~g~v~~v~~~~g~--~~~~D~vi~a~G~~p~~ 265 (434)
... +..+......+++ ++.+|.+|+|+|..|..
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 187 FDK-GEYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp EEC-SSSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EcC-CcEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 763 2333222334554 68999999999987754
No 301
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.83 E-value=1e-05 Score=78.75 Aligned_cols=55 Identities=24% Similarity=0.434 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 205 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 205 ~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
..+.+.+.+.+++.|++++++++|++|..++++ ...|.+ ++.++.+|.||+|++.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEE-CCeEEEcCEEEECCCH
Confidence 357788888899999999999999999874333 245665 4558999999999984
No 302
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.83 E-value=1.7e-05 Score=77.23 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~~~ 43 (434)
+++||+|||||++||++|..|++.| .+ |+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~---v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKN---WHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCS---EEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEeCCCCC
Confidence 4689999999999999999999998 45 9999999754
No 303
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.79 E-value=4.2e-05 Score=72.72 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCcEEEcCCeEE---------EEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 207 IAAFYEGYYANKGIKIIKGTVAV---------GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 207 ~~~~~~~~l~~~GV~~~~~~~v~---------~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
+.+.+.+.+++.|++++.+++|+ ++..+ ++.+ .+.+.+| ++.+|.||+|+|...
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 55666777888999999999999 77652 3344 6667666 899999999999653
No 304
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.78 E-value=7.4e-05 Score=78.89 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=71.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc-------C----CHHHHHHHHHHHHhc-CcEEEcCCeEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-------F----TADIAAFYEGYYANK-GIKIIKGTVAVGF 231 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~-------~----~~~~~~~~~~~l~~~-GV~~~~~~~v~~i 231 (434)
.+++|||+|+.|+.+|..+.+.|.+|+++++.+.+.... + ..+....+.+.+.+. +|+++.++.|.++
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i 208 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFGS 208 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEee
Confidence 589999999999999999999999999999876542111 1 234445555566664 9999999999888
Q ss_pred EecCCCcEEEEEe---------------CCCcEEECCEEEEcccCccCh
Q 013914 232 TTNADGEVKEVKL---------------KDGRTLEADIVVVGVGGRPLI 265 (434)
Q Consensus 232 ~~~~~g~v~~v~~---------------~~g~~~~~D~vi~a~G~~p~~ 265 (434)
.. ++.+..+.. .++.++.+|.+|+|||.+|..
T Consensus 209 ~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 209 YD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp ET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred ec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 64 333222211 112368999999999987654
No 305
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.77 E-value=7.5e-06 Score=79.14 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=69.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccC--------Ccc-CCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCM--------PRL-FTADIAAFYEGYYANKGIKIIKGTVAVG 230 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g--~~v~lv~~~~~~~--------~~~-~~~~~~~~~~~~l~~~GV~~~~~~~v~~ 230 (434)
.+.+++|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3579999999999999999999988 9999999887654 211 123566777888889999999987652
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 231 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 231 i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
. .+.+.+. ++.+|.||+|||..|
T Consensus 84 ------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred ------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1233332 468999999999875
No 306
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.76 E-value=1.1e-05 Score=85.65 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCccC-------Cc-cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWCM-------PR-LFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 233 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~-~v~lv~~~~~~~-------~~-~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~ 233 (434)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. +. .++.+..+...+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999999 799999876542 11 13566777777889999999999987631
Q ss_pred cCCCcEEEEEeCCCcEEECCEEEEcccC-ccCh
Q 013914 234 NADGEVKEVKLKDGRTLEADIVVVGVGG-RPLI 265 (434)
Q Consensus 234 ~~~g~v~~v~~~~g~~~~~D~vi~a~G~-~p~~ 265 (434)
. .+++++++++.+|.||+|||. +|..
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 133444445779999999997 5653
No 307
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.76 E-value=1.8e-05 Score=76.99 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC--CCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g--~~~~~V~vie~~~~~ 43 (434)
++||+|||||++|+++|++|++.| .+ |+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~---v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLN---ITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSE---EEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCC---EEEEECCCCC
Confidence 689999999999999999999998 55 9999998653
No 308
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.75 E-value=1.9e-05 Score=77.53 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
+.+||+|||||++||+||..|++.|++ |+|+|+++..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLN---VTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCE---EEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEeCCCC
Confidence 358999999999999999999999886 9999999764
No 309
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.73 E-value=6.7e-05 Score=73.77 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=66.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||+|+.|+-.|..|++.|.+ |+++++....+. +... ......+.+++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~l~~--------------------~d~~----~~~~~~~~l~~ 262 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLD---VTVMVRSILLRG--------------------FDQD----MANKIGEHMEE 262 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT--------------------SCHH----HHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEeccccccc--------------------CCHH----HHHHHHHHHHH
Confidence 45799999999999999999999876 999998522110 0000 01234456778
Q ss_pred cCcEEEcCCeeEEEECCC----C--EEE--ccCC-c--EEEcceEEEecCCCcccc
Q 013914 85 KGIELILSTEIVRADIAS----K--TLL--SATG-L--IFKYQILVIATGSTVLRL 129 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~----~--~v~--~~~~-~--~~~~d~lvlAtG~~~~~~ 129 (434)
.|++++.++.+..+.... . .+. ..++ + ++.+|.+++|+|-+|+..
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCS
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCC
Confidence 899999987666664321 2 222 2344 2 568999999999988654
No 310
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.71 E-value=0.00028 Score=69.00 Aligned_cols=55 Identities=16% Similarity=0.140 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccCcc
Q 013914 207 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGRP 263 (434)
Q Consensus 207 ~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~---~~g~--~~~~D~vi~a~G~~p 263 (434)
+...+.+.+++.|++++.+++|+++..+ +.+..+++ .+|+ ++.+|.||.|+|...
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRE--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEe--CCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 4556667778899999999999999873 35567776 3575 789999999999653
No 311
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.69 E-value=4e-05 Score=73.51 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
...+.+.+.+.+++.|++++++++|++|.. +++++..+. .+|+++.||.||+|+|..+.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 357788888889999999999999999987 356665565 47788999999999997753
No 312
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.68 E-value=2e-05 Score=78.37 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC---CCc--EEECCEEEEcccCc
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGR 262 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~---~g~--~~~~D~vi~a~G~~ 262 (434)
+..+...+.+.+++.|++++.+++|+++.. +++.+.+|.+. +|+ ++.+|.||+|+|.-
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 456677777888899999999999999987 34566667653 343 68999999999953
No 313
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.67 E-value=6.8e-05 Score=76.44 Aligned_cols=98 Identities=14% Similarity=0.119 Sum_probs=71.8
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 5 SFKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 5 ~~dvvIIG--~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
..+|+||| +|..|+.+|..|++.|.+ |+++++.+...-. .. ... ....+.+.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~---Vtlv~~~~~l~~~-------~~----~~~-----------~~~~l~~~l 577 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYE---VSIVTPGAQVSSW-------TN----NTF-----------EVNRIQRRL 577 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCE---EEEEESSSSTTGG-------GG----GGT-----------CHHHHHHHH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCe---eEEEecccccccc-------cc----cch-----------hHHHHHHHH
Confidence 35799999 999999999999999876 9999987542100 00 000 012345667
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEc---cCCcEEEcceEEEecCCCcc
Q 013914 83 KEKGIELILSTEIVRADIASKTLLS---ATGLIFKYQILVIATGSTVL 127 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~~d~lvlAtG~~~~ 127 (434)
++.|++++.++.+.+++.+...+.. .++.++.+|.+|+|+|.+|+
T Consensus 578 ~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 578 IENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 7889999999999999876555542 24457999999999998875
No 314
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.65 E-value=8.6e-06 Score=78.64 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=68.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-C------CCeEEEEccCCccCC--------c-cCCHHHHHHHHHHHHhcCcEEEcCC
Q 013914 163 NGKAVVVGGGYIGLELSAALKI-N------NIDVSMVYPEPWCMP--------R-LFTADIAAFYEGYYANKGIKIIKGT 226 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~-~------g~~v~lv~~~~~~~~--------~-~~~~~~~~~~~~~l~~~GV~~~~~~ 226 (434)
+++++|||+|+.|+.+|..|.+ . |.+|+++++.+.+.. . ....++...+.+.+++.||+++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5689999999999999999999 7 999999998866532 1 1234566777788888999999885
Q ss_pred eEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 227 VAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 227 ~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
.+ +. .+.++++ ++.+|.||+|+|..
T Consensus 83 ~v-------~~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV-------GE---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB-------TT---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EE-------CC---EEEECCC-eEeCCEEEEeeCCC
Confidence 43 11 1344444 47899999999986
No 315
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.65 E-value=3.4e-05 Score=75.12 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||+|||||++||+||..|++.|.+ |+|+|+++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~---v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTD---AVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCC---EEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCCC
Confidence 368999999999999999999999987 9999999763
No 316
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.65 E-value=4.5e-05 Score=70.48 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
+||+|||||+||+.||..|++.|.+ |+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~---V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP---VRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc---EEEEeccCC
Confidence 6999999999999999999999987 999999763
No 317
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.65 E-value=3.2e-05 Score=72.94 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEAVA 43 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~~~ 43 (434)
+||+|||||++|+++|..|++. |.+ |+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWA---IDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECCCCC
Confidence 3899999999999999999999 876 9999998653
No 318
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.64 E-value=0.00029 Score=68.31 Aligned_cols=98 Identities=21% Similarity=0.293 Sum_probs=70.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC-------------c------------------------------
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP-------------R------------------------------ 201 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~-------------~------------------------------ 201 (434)
.|+|||+|..|+.+|..+++.|.+|+++++...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 379999999999999999999999999987610000 0
Q ss_pred -----------------------------------cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-
Q 013914 202 -----------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK- 245 (434)
Q Consensus 202 -----------------------------------~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~- 245 (434)
.....+.+.+.+.+++.||+++.++.+ ++.. +++++.++...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 001134455666667789999999999 9876 35666666553
Q ss_pred CCcEEECCEEEEcccCccC
Q 013914 246 DGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 246 ~g~~~~~D~vi~a~G~~p~ 264 (434)
++.++.+|.||+|+|..+.
T Consensus 159 ~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TEEECCCSEEEECCCCCGG
T ss_pred CCCeEEeeeEEECCCCCcc
Confidence 2235789999999996553
No 319
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.64 E-value=3.8e-05 Score=72.38 Aligned_cols=36 Identities=31% Similarity=0.487 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
++||+|||||++|+++|..|++.|.+ |+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQ---VHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCc---EEEEEecCCc
Confidence 57999999999999999999998876 9999998764
No 320
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.63 E-value=7.8e-05 Score=75.77 Aligned_cols=87 Identities=15% Similarity=0.184 Sum_probs=66.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc-----cCC-----HHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----LFT-----ADIAAFYEGYYANKGIKIIKGTVAVGFT 232 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~-----~~~-----~~~~~~~~~~l~~~GV~~~~~~~v~~i~ 232 (434)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+... .++ .+..+.+.+.+++.||++++++.+...
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~~- 451 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTAD- 451 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCSS-
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecHH-
Confidence 468999999999999999999999999999987654211 011 234556677788899999998764320
Q ss_pred ecCCCcEEEEEeCCCcEE-ECCEEEEcccCccChh
Q 013914 233 TNADGEVKEVKLKDGRTL-EADIVVVGVGGRPLIS 266 (434)
Q Consensus 233 ~~~~g~v~~v~~~~g~~~-~~D~vi~a~G~~p~~~ 266 (434)
.+ .+|.+|+|||.+|...
T Consensus 452 ----------------~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 452 ----------------QLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ----------------SSCCSSEEEECCCEEECCC
T ss_pred ----------------HhhcCCEEEEccCCCcCCC
Confidence 13 7999999999887654
No 321
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.63 E-value=2.9e-05 Score=72.31 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC------CCCCcEEEEeCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQG------VKPGELAIISKEAV 42 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g------~~~~~V~vie~~~~ 42 (434)
+||+|||||++|+++|++|+++| .+ |+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~---V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLD---IKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCE---EEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCce---EEEEECCCC
Confidence 38999999999999999999987 55 999999863
No 322
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.62 E-value=0.00013 Score=73.17 Aligned_cols=97 Identities=12% Similarity=0.179 Sum_probs=66.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
..+++|||||..|+-+|..|++.|.+ |+++++....+. + ...+ .....+.+++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~~----~---------d~~~-----------~~~~~~~l~~ 338 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGD---VTVMVRSILLRG----F---------DQQM-----------AEKVGDYMEN 338 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT----S---------CHHH-----------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEECCcCcCc----C---------CHHH-----------HHHHHHHHHh
Confidence 35899999999999999999999876 999998621110 0 0000 1123456677
Q ss_pred cCcEEEcCCeeEEEEC------CC---CEE--E--ccCCcEEE--cceEEEecCCCccc
Q 013914 85 KGIELILSTEIVRADI------AS---KTL--L--SATGLIFK--YQILVIATGSTVLR 128 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~------~~---~~v--~--~~~~~~~~--~d~lvlAtG~~~~~ 128 (434)
.|++++.++.+..+.. +. ..+ . ..+|+++. +|.+++|+|.+|+.
T Consensus 339 ~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 339 HGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp TTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred CCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 8999999877766632 11 222 2 24665554 99999999998865
No 323
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.61 E-value=4.5e-05 Score=74.69 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
..+||+|||||++||++|..|++.|.+ |+|+|+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCC
Confidence 468999999999999999999999986 9999998753
No 324
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.60 E-value=4.3e-05 Score=71.58 Aligned_cols=35 Identities=29% Similarity=0.525 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
+||+|||||++|+++|..|++.|.+ |+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKK---VLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCC---EEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEecCCCC
Confidence 6999999999999999999999887 9999998653
No 325
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.59 E-value=4.4e-05 Score=74.70 Aligned_cols=55 Identities=22% Similarity=0.238 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhcC-cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 205 ADIAAFYEGYYANKG-IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 205 ~~~~~~~~~~l~~~G-V~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
..+.+.+.+.+++.| ++++++++|++|...+++ ..|++.+|+++.+|.||+|+|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCH
Confidence 467788888888888 999999999999874433 4688888988999999999994
No 326
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.44 E-value=0.00089 Score=66.86 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=71.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccCC-------------------------------ccC-------
Q 013914 164 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMP-------------------------------RLF------- 203 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g--~~v~lv~~~~~~~~-------------------------------~~~------- 203 (434)
-.|+|||+|..|+-+|..|++.| .+|+++++.+.... ...
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 37999999999999999999999 99999987532100 000
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhcC-cEEEcCCeEEEEEecC
Q 013914 204 -----------------------------------------------TADIAAFYEGYYANKG-IKIIKGTVAVGFTTNA 235 (434)
Q Consensus 204 -----------------------------------------------~~~~~~~~~~~l~~~G-V~~~~~~~v~~i~~~~ 235 (434)
...+...+.+.+++.| |+++.++.+.++.. +
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-D 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-e
Confidence 0133444555566678 99999999999986 3
Q ss_pred CCcEEEEEe---CCCc--EEECCEEEEcccC
Q 013914 236 DGEVKEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 236 ~g~v~~v~~---~~g~--~~~~D~vi~a~G~ 261 (434)
++++.++.. .+|+ .+.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 566666543 5676 6899999999994
No 327
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.37 E-value=0.00012 Score=73.80 Aligned_cols=35 Identities=43% Similarity=0.582 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHH---H-cCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFA---K-QGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~---~-~g~~~~~V~vie~~~~ 42 (434)
.+||||||||+||++||..|+ + .|.+ |+||||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~---V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLK---VTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCC---EEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCe---EEEEeCcCC
Confidence 489999999999999999999 5 7877 999999864
No 328
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.36 E-value=0.00095 Score=67.30 Aligned_cols=99 Identities=23% Similarity=0.247 Sum_probs=73.4
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CCCeEEEEccCCccCC------------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCMP------------------------------------------ 200 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~-~g~~v~lv~~~~~~~~------------------------------------------ 200 (434)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 379999999999999999999 9999999987532100
Q ss_pred --c---------------------cCC-HHHHHHHHHHHHhcCc--EEEcCCeEEEEEecCC--CcEEEEEeC------C
Q 013914 201 --R---------------------LFT-ADIAAFYEGYYANKGI--KIIKGTVAVGFTTNAD--GEVKEVKLK------D 246 (434)
Q Consensus 201 --~---------------------~~~-~~~~~~~~~~l~~~GV--~~~~~~~v~~i~~~~~--g~v~~v~~~------~ 246 (434)
. .++ ..+.+.+.+.+++.|+ ++++++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 001 2456677788888877 9999999999987442 222345543 4
Q ss_pred C--cEEECCEEEEcccCc
Q 013914 247 G--RTLEADIVVVGVGGR 262 (434)
Q Consensus 247 g--~~~~~D~vi~a~G~~ 262 (434)
| +++.+|.||.|.|..
T Consensus 193 G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGAR 210 (639)
T ss_dssp TCEEEEEEEEEEECCCTT
T ss_pred CCeEEEEeCEEEECCCcc
Confidence 6 478999999999954
No 329
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.34 E-value=0.00017 Score=70.03 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhc--------CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013914 206 DIAAFYEGYYANK--------GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 261 (434)
Q Consensus 206 ~~~~~~~~~l~~~--------GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~ 261 (434)
.+.+.+.+.+.+. |++++++++|++|...+++ ..|++.+|+++.+|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG--VTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC--EEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc--EEEEECCCCEEEcCEEEEecCH
Confidence 3445555544443 6889999999999884444 4588899989999999999883
No 330
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.33 E-value=0.00012 Score=68.85 Aligned_cols=86 Identities=19% Similarity=0.172 Sum_probs=67.4
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCcc----------------------C-Cc------------------
Q 013914 165 KAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWC----------------------M-PR------------------ 201 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~--g~~v~lv~~~~~~----------------------~-~~------------------ 201 (434)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 689999999999999999999 9999999986543 0 00
Q ss_pred -------------cCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013914 202 -------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 202 -------------~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~p 263 (434)
....++.+.+.+.+++.|++++++++|++++. . +++++|.||.|.|...
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNH 143 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCc
Confidence 01145677888888888999999999888753 1 1257999999999654
No 331
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.26 E-value=0.0013 Score=65.06 Aligned_cols=95 Identities=17% Similarity=0.274 Sum_probs=68.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC-------------------------------------------
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------- 200 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~------------------------------------------- 200 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3799999999999999999999999999987643210
Q ss_pred -c-----c--------------------CC-HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--c
Q 013914 201 -R-----L--------------------FT-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--R 248 (434)
Q Consensus 201 -~-----~--------------------~~-~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g--~ 248 (434)
. . ++ ..+.+.+.+.+++. +++++++++++.++++ ..+++.+ | .
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~--v~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH--VRATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC--EEEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE--EEEEEEECCCCCEE
Confidence 0 0 00 13444555555555 8899999999875444 3355544 6 4
Q ss_pred EEECCEEEEcccCcc
Q 013914 249 TLEADIVVVGVGGRP 263 (434)
Q Consensus 249 ~~~~D~vi~a~G~~p 263 (434)
++.+|.||.|.|...
T Consensus 182 ~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 182 AVHARYLVACDGASS 196 (549)
T ss_dssp EEEEEEEEECCCTTC
T ss_pred EEEeCEEEECCCCCc
Confidence 789999999999643
No 332
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.24 E-value=0.0049 Score=61.13 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~ 196 (434)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999998764
No 333
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.23 E-value=0.00095 Score=65.77 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~ 197 (434)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 479999999999999999999 999999988754
No 334
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.22 E-value=0.00024 Score=72.87 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=35.1
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc
Q 013914 218 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG 260 (434)
Q Consensus 218 ~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G 260 (434)
.|++++++++|++|+.++++ ..|++.+|+++.+|.||+|++
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~--v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE--VQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS--EEEEETTCCEEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCE--EEEEECCCcEEEcCEEEECCC
Confidence 37899999999999974444 468889998999999999996
No 335
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.21 E-value=0.00038 Score=71.28 Aligned_cols=98 Identities=18% Similarity=0.146 Sum_probs=68.7
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 5 SFKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 5 ~~dvvIIG--~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
..+|+||| ||..|+-+|..|++.|.+ |+++++.+ .. ....... . .....+.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vtlv~~~~-l~-------~~~~~~~---~------------~~~~~~~l 581 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHE---VTIVSGVH-LA-------NYMHFTL---E------------YPNMMRRL 581 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCE---EEEEESSC-TT-------HHHHHTT---C------------HHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCE---EEEEeccc-cc-------ccccccc---c------------HHHHHHHH
Confidence 36899999 999999999999999875 99999875 21 0000000 0 01234566
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEc--cCC-cE------------------EEcceEEEecCCCccc
Q 013914 83 KEKGIELILSTEIVRADIASKTLLS--ATG-LI------------------FKYQILVIATGSTVLR 128 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~--~~~-~~------------------~~~d~lvlAtG~~~~~ 128 (434)
++.||+++.++.+.+++.+...+.. .++ +. +.+|.+|+|+|..|..
T Consensus 582 ~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 582 HELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp HHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred HhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 7889999999999999865333332 222 22 8999999999988753
No 336
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.19 E-value=0.00028 Score=69.81 Aligned_cols=58 Identities=10% Similarity=0.200 Sum_probs=42.7
Q ss_pred HHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EE---ECCEEEEcccCccChhhh
Q 013914 210 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TL---EADIVVVGVGGRPLISLF 268 (434)
Q Consensus 210 ~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g~--~~---~~D~vi~a~G~~p~~~~~ 268 (434)
++....++.+++++.++.|+++.. +++++.+|++.+ |+ ++ .++.||+|+|.-....++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 444444456999999999999987 356788888865 63 34 789999999975444444
No 337
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.16 E-value=0.00015 Score=71.39 Aligned_cols=35 Identities=29% Similarity=0.557 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..||+||||+|.||+.+|.+|++ +.+ |+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~---VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYK---VLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSC---EEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCc---EEEEecCCC
Confidence 35899999999999999999999 876 999999854
No 338
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.14 E-value=0.00034 Score=70.86 Aligned_cols=37 Identities=30% Similarity=0.450 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
+.+||+|||+|++|+++|..|++.|++ |+|+|+.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~---v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCe---EEEEecCCCC
Confidence 358999999999999999999999987 9999998653
No 339
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.11 E-value=0.0004 Score=71.76 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
.++|+|||+|++||++|..|++.|++ |+|+|+.+..
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~---v~v~E~~~~~ 313 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEARDRV 313 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEecCcC
Confidence 57999999999999999999999987 9999998764
No 340
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.04 E-value=0.0036 Score=62.57 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=37.6
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccC
Q 013914 211 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 211 ~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~---~~g~--~~~~D~vi~a~G~ 261 (434)
+.+.+++.||+++.++.+.++.. +++++.++.. .+|+ .+.++.||+|+|-
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 33344567899999999999876 3677777665 4675 6889999999994
No 341
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.02 E-value=0.00037 Score=68.63 Aligned_cols=52 Identities=17% Similarity=0.287 Sum_probs=37.1
Q ss_pred HhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC---cEEECCEEEEcccCccChhhh
Q 013914 216 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG---RTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 216 ~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g---~~~~~D~vi~a~G~~p~~~~~ 268 (434)
.+.++.+..++.+.++.. +++++.++...+. .++.++.||+|.|.--...+|
T Consensus 222 ~r~nl~v~~~~~v~~i~~-~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKL-EGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp TCTTEEEECSCEEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCCeEEEeCCEEEEEEe-cCCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 456799999999999987 4566666665432 356789999999954434443
No 342
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.01 E-value=0.00041 Score=68.71 Aligned_cols=36 Identities=28% Similarity=0.504 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~~ 42 (434)
+.||+||||||.||+.+|.+|++.+ .+ |+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~---VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVT---VLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSC---EEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCc---EEEEecCCC
Confidence 4699999999999999999999976 34 999999864
No 343
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.97 E-value=0.0058 Score=62.64 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.+|+|||+|..|+.+|..|.+.|.+|+++++.+++
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 58999999999999999999999999999986544
No 344
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.94 E-value=0.00039 Score=70.02 Aligned_cols=36 Identities=19% Similarity=0.400 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC--------CCCCcEEEEeCCC-CC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQG--------VKPGELAIISKEA-VA 43 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g--------~~~~~V~vie~~~-~~ 43 (434)
.++|+|||||++||+||..|.+.| ++ |+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~---V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGID---VQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEE---EEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCce---EEEEeccCccc
Confidence 478999999999999999999987 54 99999987 53
No 345
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.93 E-value=0.0073 Score=60.78 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=38.1
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccC
Q 013914 211 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 211 ~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~---~~g~--~~~~D~vi~a~G~ 261 (434)
+.+.+++.||+++.++.+.++.. +++++.++.. .+|+ .+.++.||+|+|-
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 34455667899999999999976 4577766654 5675 4899999999994
No 346
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.92 E-value=0.006 Score=58.83 Aligned_cols=35 Identities=23% Similarity=0.501 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC------CeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINN------IDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g------~~v~lv~~~~~~ 198 (434)
.+|+|||+|.+|+-+|..|.+.| .+|+++++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 58999999999999999999999 999999987654
No 347
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.90 E-value=0.00064 Score=67.11 Aligned_cols=53 Identities=23% Similarity=0.345 Sum_probs=39.7
Q ss_pred HHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EEECC-EEEEcccCc
Q 013914 210 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEAD-IVVVGVGGR 262 (434)
Q Consensus 210 ~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~~~---g~--~~~~D-~vi~a~G~~ 262 (434)
++....++.|++++.++.|++|..++++++.+|++.+ |+ ++.++ .||+|+|.-
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3333344679999999999999884337788887744 53 67898 899999963
No 348
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.86 E-value=0.00088 Score=66.72 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=41.2
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCC---CcEEEEEeC--CCc--EEEC-CEEEEcccCccChhhh
Q 013914 211 YEGYYANKGIKIIKGTVAVGFTTNAD---GEVKEVKLK--DGR--TLEA-DIVVVGVGGRPLISLF 268 (434)
Q Consensus 211 ~~~~l~~~GV~~~~~~~v~~i~~~~~---g~v~~v~~~--~g~--~~~~-D~vi~a~G~~p~~~~~ 268 (434)
+....++.+++++.++.|+++..+++ +++.+|+.. +|+ ++.+ +.||+|+|.-....++
T Consensus 237 l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL 302 (587)
T 1gpe_A 237 LLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLIL 302 (587)
T ss_dssp TTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHH
Confidence 33344567999999999999976432 477787764 564 4667 8899999965444444
No 349
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.84 E-value=0.00096 Score=65.25 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+|++|||+|++|+.+|..|++.+.+ |+|||+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIP---TQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECCCC
Confidence 468999999999999999999998877 999999864
No 350
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.84 E-value=0.0057 Score=59.65 Aligned_cols=102 Identities=14% Similarity=0.165 Sum_probs=71.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CeEEEEccCCccC-------Cc----------------------
Q 013914 165 KAVVVGGGYIGLELSAALKINN--------------IDVSMVYPEPWCM-------PR---------------------- 201 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g--------------~~v~lv~~~~~~~-------~~---------------------- 201 (434)
.++|||+|++|+-+|..|.+.| ....++++.+.+. +.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 4899999999999999887642 3455666544211 00
Q ss_pred -------------------c--CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCC------cEEEEEeCCC-----cE
Q 013914 202 -------------------L--FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADG------EVKEVKLKDG-----RT 249 (434)
Q Consensus 202 -------------------~--~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g------~v~~v~~~~g-----~~ 249 (434)
. ...++.++++...++.+..++++++|++++..+++ ....|++.++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 01356778888888888889999999999863332 2356666543 36
Q ss_pred EECCEEEEcccCccChh
Q 013914 250 LEADIVVVGVGGRPLIS 266 (434)
Q Consensus 250 ~~~D~vi~a~G~~p~~~ 266 (434)
+.|+.||+|+|..|+..
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999887654
No 351
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.81 E-value=0.00074 Score=66.89 Aligned_cols=59 Identities=12% Similarity=0.206 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCcEEEcCCeEEEEEecC---CCcEEEEEeC--CCc--EEECC-EEEEcccCccChhh
Q 013914 209 AFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVKEVKLK--DGR--TLEAD-IVVVGVGGRPLISL 267 (434)
Q Consensus 209 ~~~~~~l~~~GV~~~~~~~v~~i~~~~---~g~v~~v~~~--~g~--~~~~D-~vi~a~G~~p~~~~ 267 (434)
.++...+++.++++++++.|++|..++ ++++.+|++. +|+ ++.+. -||+|+|.--...+
T Consensus 231 ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqL 297 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTI 297 (583)
T ss_dssp HHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHH
Confidence 344445567899999999999998743 5678888874 564 46676 59999995433333
No 352
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.81 E-value=0.00096 Score=65.22 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+|++|||+|++|+.+|..|++.|.+ |+|||+...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQ---TLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCC
Confidence 468999999999999999999998877 999999864
No 353
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.77 E-value=0.0034 Score=60.30 Aligned_cols=100 Identities=16% Similarity=0.299 Sum_probs=61.4
Q ss_pred CCeEEecCHHHHHHHHHHHHh--CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHh
Q 013914 140 KNIFYLREIDDADKLVEAIKA--KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 217 (434)
Q Consensus 140 ~~v~~~~~~~~~~~~~~~l~~--~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (434)
..++...+.++..++.+.+.. ...++++|+|||.+|..+|..|.+ ..+|+++++ +++-++.+.+.|.
T Consensus 210 D~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~---------d~~r~~~la~~l~- 278 (461)
T 4g65_A 210 DEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIER---------NLQRAEKLSEELE- 278 (461)
T ss_dssp CEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEES---------CHHHHHHHHHHCT-
T ss_pred CEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEec---------CHHHHHHHHHHCC-
Confidence 446655555666666655532 256899999999999999999854 588999974 5555666655543
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013914 218 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 262 (434)
Q Consensus 218 ~GV~~~~~~~v~~i~~~~~g~v~~v~~~~g~~~~~D~vi~a~G~~ 262 (434)
+..+..+ |+.-..+-.+.| .-++|.++.+|+..
T Consensus 279 -~~~Vi~G----------D~td~~~L~ee~-i~~~D~~ia~T~~D 311 (461)
T 4g65_A 279 -NTIVFCG----------DAADQELLTEEN-IDQVDVFIALTNED 311 (461)
T ss_dssp -TSEEEES----------CTTCHHHHHHTT-GGGCSEEEECCSCH
T ss_pred -CceEEec----------cccchhhHhhcC-chhhcEEEEcccCc
Confidence 2222222 210000101111 34699999999964
No 354
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.64 E-value=0.013 Score=59.02 Aligned_cols=49 Identities=14% Similarity=0.232 Sum_probs=36.4
Q ss_pred HHHHhc-Cc-EEEcCCeEEEEEecCC--CcEEEEEe---CCCc--EEECCEEEEcccC
Q 013914 213 GYYANK-GI-KIIKGTVAVGFTTNAD--GEVKEVKL---KDGR--TLEADIVVVGVGG 261 (434)
Q Consensus 213 ~~l~~~-GV-~~~~~~~v~~i~~~~~--g~v~~v~~---~~g~--~~~~D~vi~a~G~ 261 (434)
+.+++. || +++.++.+.++..+++ +++.++.. .+|+ .+.++.||+|+|-
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 344455 89 9999999999987433 27777653 5665 6889999999993
No 355
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.64 E-value=0.011 Score=59.72 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHh-----CCCeEEEEccC
Q 013914 165 KAVVVGGGYIGLELSAALKI-----NNIDVSMVYPE 195 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~-----~g~~v~lv~~~ 195 (434)
.|+|||+|+.|+-+|..|++ .|.+|+++++.
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 69999999999999999999 99999999875
No 356
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.52 E-value=0.00098 Score=65.83 Aligned_cols=55 Identities=15% Similarity=0.238 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEec---CC-CcEEEEEeCC--C-c--EEEC-CEEEEcccCc
Q 013914 208 AAFYEGYYANKGIKIIKGTVAVGFTTN---AD-GEVKEVKLKD--G-R--TLEA-DIVVVGVGGR 262 (434)
Q Consensus 208 ~~~~~~~l~~~GV~~~~~~~v~~i~~~---~~-g~v~~v~~~~--g-~--~~~~-D~vi~a~G~~ 262 (434)
..++...+++.++++++++.|++|..+ ++ +++.+|++.+ | + ++.+ .-||+|.|.-
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai 275 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSV 275 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHH
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCc
Confidence 345555557789999999999999874 12 5677787643 4 3 4667 6699999943
No 357
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.36 E-value=0.005 Score=59.14 Aligned_cols=133 Identities=18% Similarity=0.158 Sum_probs=78.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHh
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 83 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
+.++|.|||.|.+|+++|..|+++|++ |++.|.+... .....+.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~~~-------------------------------~~~~~~~L~ 53 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKPFD-------------------------------ENPTAQSLL 53 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSCGG-------------------------------GCHHHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCccc-------------------------------CChHHHHHH
Confidence 357899999999999999999999987 9999986420 001234566
Q ss_pred hcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCC
Q 013914 84 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 163 (434)
Q Consensus 84 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~ 163 (434)
+.|+++..+... +. + . ++ .+|.+|+++|..+..|.. ......++-.+...+-+. . +. +.
T Consensus 54 ~~gi~~~~g~~~-----~~--~-~-~~---~~d~vv~spgi~~~~p~~---~~a~~~gi~v~~~~e~~~---~-~~--~~ 112 (451)
T 3lk7_A 54 EEGIKVVCGSHP-----LE--L-L-DE---DFCYMIKNPGIPYNNPMV---KKALEKQIPVLTEVELAY---L-VS--ES 112 (451)
T ss_dssp HTTCEEEESCCC-----GG--G-G-GS---CEEEEEECTTSCTTSHHH---HHHHHTTCCEECHHHHHH---H-HC--CS
T ss_pred hCCCEEEECCCh-----HH--h-h-cC---CCCEEEECCcCCCCChhH---HHHHHCCCcEEeHHHHHH---H-hc--CC
Confidence 779988876431 10 0 0 10 178999999987755541 111112221222222111 1 11 23
Q ss_pred CcEEEECCC---HHHHHHHHHHHhCCCeEEE
Q 013914 164 GKAVVVGGG---YIGLELSAALKINNIDVSM 191 (434)
Q Consensus 164 ~~v~ViG~g---~~~~e~a~~l~~~g~~v~l 191 (434)
+.+.|-|+. -+..-++..|...|.++.+
T Consensus 113 ~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~ 143 (451)
T 3lk7_A 113 QLIGITGSNGKTTTTTMIAEVLNAGGQRGLL 143 (451)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 455666642 3344566777888877644
No 358
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.28 E-value=0.004 Score=55.08 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..|+|||+|+.|+.+|..|++.|.+|+++++.+.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 36999999999999999999999999999987654
No 359
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.20 E-value=0.0057 Score=60.81 Aligned_cols=61 Identities=8% Similarity=-0.003 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC-CcEEEEEeCCCcEEECCEEEEcccCccC
Q 013914 204 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~-g~v~~v~~~~g~~~~~D~vi~a~G~~p~ 264 (434)
...+.+.+.+.+++.|.+++++++|.+|..+++ |++.++.+.+|+++.||.||+.....|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 457888999999999999999999999987443 7888888888999999999997765553
No 360
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.02 E-value=0.027 Score=56.60 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhC------CCeEEEEccC
Q 013914 164 GKAVVVGGGYIGLELSAALKIN------NIDVSMVYPE 195 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~------g~~v~lv~~~ 195 (434)
-.|+|||+|..|+-+|..+++. |.+|+++++.
T Consensus 23 ~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~ 60 (662)
T 3gyx_A 23 VDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA 60 (662)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec
Confidence 3799999999999999999997 9999999874
No 361
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.69 E-value=0.0075 Score=58.75 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~ 199 (434)
|+|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCC
Confidence 689999999999999999999999999999987753
No 362
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.67 E-value=0.019 Score=52.39 Aligned_cols=80 Identities=19% Similarity=0.215 Sum_probs=58.0
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013914 162 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 240 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e-~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~ 240 (434)
..+++.|||.|-+|+. +|..|.+.|.+|++.+..+.. + ..+.|++.|++++.+.....+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~------~-----~~~~L~~~gi~v~~g~~~~~l--------- 62 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP------P-----MSTQLEALGIDVYEGFDAAQL--------- 62 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT------T-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc------H-----HHHHHHhCCCEEECCCCHHHc---------
Confidence 4689999999999996 899999999999999876421 1 234577889998866421110
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhh
Q 013914 241 EVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 241 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
.. ..+|.||.++|..|..+.+
T Consensus 63 ----~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 63 ----DE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ----GS---CCCSEEEECTTCCTTCHHH
T ss_pred ----CC---CCCCEEEECCCcCCCCHHH
Confidence 00 1389999999988776544
No 363
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.64 E-value=0.012 Score=50.12 Aligned_cols=107 Identities=16% Similarity=0.242 Sum_probs=68.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 241 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~ 241 (434)
.+++++|||+|.+|...+..|.+.|.+|+++.+. +.++ +.++.++.+++++...- ..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~----l~~l~~~~~i~~i~~~~----~~-------- 86 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAE----INEWEAKGQLRVKRKKV----GE-------- 86 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHH----HHHHHHTTSCEEECSCC----CG--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHH----HHHHHHcCCcEEEECCC----CH--------
Confidence 5799999999999999999999999999999753 3444 33444556677653321 11
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhhhccccccCCcEEeCC-----CCCCCCCcEEEecccc
Q 013914 242 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDD-----FFKTSADDVYAVGDVA 299 (434)
Q Consensus 242 v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~-----~~~t~~~~iya~GD~~ 299 (434)
+.--.+|+||.||+.......+.... . .++.||- .+.--.|.++--|+..
T Consensus 87 -----~dL~~adLVIaAT~d~~~N~~I~~~a--k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 87 -----EDLLNVFFIVVATNDQAVNKFVKQHI--K-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -----GGSSSCSEEEECCCCTHHHHHHHHHS--C-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred -----hHhCCCCEEEECCCCHHHHHHHHHHH--h-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 00113899999999754433332111 2 4566653 2222467777777644
No 364
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.0097 Score=54.43 Aligned_cols=76 Identities=11% Similarity=0.081 Sum_probs=51.1
Q ss_pred HHHHHHHhCCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEccCCccCCcc------CC-HHHHHHHHHHHHhcCcEEE
Q 013914 153 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRL------FT-ADIAAFYEGYYANKGIKII 223 (434)
Q Consensus 153 ~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~--~g~~v~lv~~~~~~~~~~------~~-~~~~~~~~~~l~~~GV~~~ 223 (434)
++.+.+.......|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.... ++ ..+.+.+.+.+++.|+++.
T Consensus 55 ~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~ 134 (326)
T 3fpz_A 55 RYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE 134 (326)
T ss_dssp HHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCE
T ss_pred HHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEE
Confidence 33444544456789999999999999999964 699999999876543211 11 1112234456778888887
Q ss_pred cCCeE
Q 013914 224 KGTVA 228 (434)
Q Consensus 224 ~~~~v 228 (434)
.+...
T Consensus 135 ~~~~~ 139 (326)
T 3fpz_A 135 DEGDY 139 (326)
T ss_dssp ECSSE
T ss_pred ECCcc
Confidence 66543
No 365
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.59 E-value=0.016 Score=55.56 Aligned_cols=82 Identities=17% Similarity=0.154 Sum_probs=59.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 241 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~ 241 (434)
.++++.|+|.|.+|+.+|..|.+.|.+|+..+..+... ++ ..+.|++.|++++.+.....+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----NP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----CH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----Ch-----HHHHHHhCCCEEEECCChHHh----------
Confidence 57899999999999999999999999999998764211 11 234678889999877531100
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhh
Q 013914 242 VKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 242 v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
+. + .+|.||+++|..++...+
T Consensus 69 --~~-~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --LD-E---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --GG-S---CEEEEEECTTSCTTSHHH
T ss_pred --hc-C---CCCEEEECCcCCCCChhH
Confidence 00 0 178999999988776544
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.58 E-value=0.018 Score=45.36 Aligned_cols=34 Identities=21% Similarity=0.464 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+++|+|+|..|...|..|.+.|.+ |+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~---V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKK---VLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 46899999999999999999999987 99999873
No 367
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.46 E-value=0.022 Score=45.55 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
+.+++|+|+|..|...|..|.+.|.+ |+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~---V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQN---VTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 56899999999999999999998887 9999986
No 368
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.23 E-value=0.019 Score=43.32 Aligned_cols=34 Identities=9% Similarity=0.244 Sum_probs=29.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g-~~~~~V~vie~~~ 41 (434)
+++|+|+|+|..|...+..|.+.| .+ |+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~---v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYS---VTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEE---EEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCce---EEEEeCCH
Confidence 468999999999999999999988 54 99998863
No 369
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.09 E-value=0.02 Score=53.57 Aligned_cols=99 Identities=18% Similarity=0.247 Sum_probs=74.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc-----C------------------------------------
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----F------------------------------------ 203 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~-----~------------------------------------ 203 (434)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+.... +
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 48999999999999999999999999999865431100 0
Q ss_pred ---------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe-CCC--cEEECCEEEEcccCccC
Q 013914 204 ---------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL-KDG--RTLEADIVVVGVGGRPL 264 (434)
Q Consensus 204 ---------------~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~-~~g--~~~~~D~vi~a~G~~p~ 264 (434)
...+.+.+.+.+++.|++++.++++..+.. +++.+..+.. .++ .++.+|+||-|.|....
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccccH
Confidence 013456677778889999999999999877 3555544443 233 36889999999997543
No 370
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.08 E-value=0.026 Score=45.26 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|..|...|..|.+.|.+ |+++++++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999998875 99999874
No 371
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.06 E-value=0.033 Score=43.73 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+++|+|.|..|...|..|.+.|.+ |+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~---v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIP---LVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCH
Confidence 45799999999999999999999987 99999973
No 372
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.05 E-value=0.026 Score=44.10 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=29.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.++|+|||+|..|...|..|.+.|.+ |+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~---v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHD---IVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 35799999999999999999998876 9999986
No 373
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.00 E-value=0.016 Score=56.32 Aligned_cols=127 Identities=14% Similarity=0.133 Sum_probs=73.2
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 4 KSFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~-aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
+.++|.|||.|-+|++ +|..|.++|++ |++.|.... ...+.+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~---V~~~D~~~~----------------------------------~~~~~l 63 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAPN----------------------------------SVTQHL 63 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSCC----------------------------------HHHHHH
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCe---EEEEECCCC----------------------------------HHHHHH
Confidence 3578999999999997 69999999987 999886521 112446
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCC
Q 013914 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 162 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~ 162 (434)
++.|+++..+... + . + ..+|.+|+.+|..+..|. +......++-.+...+- +.+.++ .
T Consensus 64 ~~~gi~~~~g~~~-----~--~--~-----~~~d~vV~Spgi~~~~p~---~~~a~~~gi~v~~~~e~---l~~~~~--~ 121 (494)
T 4hv4_A 64 TALGAQIYFHHRP-----E--N--V-----LDASVVVVSTAISADNPE---IVAAREARIPVIRRAEM---LAELMR--Y 121 (494)
T ss_dssp HHTTCEEESSCCG-----G--G--G-----TTCSEEEECTTSCTTCHH---HHHHHHTTCCEEEHHHH---HHHHHT--T
T ss_pred HHCCCEEECCCCH-----H--H--c-----CCCCEEEECCCCCCCCHH---HHHHHHCCCCEEcHHHH---HHHHhc--C
Confidence 6779988876321 1 0 1 137999999997765443 11111122212222222 222222 1
Q ss_pred CCcEEEECCC---HHHHHHHHHHHhCCCeE
Q 013914 163 NGKAVVVGGG---YIGLELSAALKINNIDV 189 (434)
Q Consensus 163 ~~~v~ViG~g---~~~~e~a~~l~~~g~~v 189 (434)
.+.+.|-|+. -+..-++..|...|.+.
T Consensus 122 ~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~ 151 (494)
T 4hv4_A 122 RHGIAVAGTHGKTTTTAMLSSIYAEAGLDP 151 (494)
T ss_dssp SEEEEEECSSSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEecCCChHHHHHHHHHHHHhcCCCC
Confidence 2245666642 23445666677777653
No 374
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.84 E-value=0.034 Score=50.77 Aligned_cols=79 Identities=15% Similarity=0.057 Sum_probs=54.2
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhH
Q 013914 4 KSFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 82 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~-aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
.+++|.|||.|.+|++ +|..|.++|++ |++.|..... ...+.+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~---V~~~D~~~~~---------------------------------~~~~~L 46 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFE---VSGCDAKMYP---------------------------------PMSTQL 46 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCE---EEEEESSCCT---------------------------------THHHHH
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCE---EEEEcCCCCc---------------------------------HHHHHH
Confidence 3568999999999997 78889999987 9999987420 113446
Q ss_pred hhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCccccc
Q 013914 83 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLT 130 (434)
Q Consensus 83 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~ 130 (434)
++.|+++..+... + . +.. ..+|.+|+.+|-.+..|.
T Consensus 47 ~~~gi~v~~g~~~-----~--~--l~~---~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 47 EALGIDVYEGFDA-----A--Q--LDE---FKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp HHTTCEEEESCCG-----G--G--GGS---CCCSEEEECTTCCTTCHH
T ss_pred HhCCCEEECCCCH-----H--H--cCC---CCCCEEEECCCcCCCCHH
Confidence 6778888776321 1 0 000 137899999987665443
No 375
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.82 E-value=0.034 Score=54.05 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=46.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCC-----------------HHHHHHHHHHHHhcCcEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFT-----------------ADIAAFYEGYYANKGIKI 222 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~-----------------~~~~~~~~~~l~~~GV~~ 222 (434)
.+.+|+|||+|.+|+.+|..|.+.|.+|+++++.+++..+... ......+.+.+++.|+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 109 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 109 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCc
Confidence 3578999999999999999999999999999998776543100 001345667777888765
No 376
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.58 E-value=0.041 Score=43.12 Aligned_cols=34 Identities=15% Similarity=0.353 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+|+|+|+|..|...|..|.+.|.+ |++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~---v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHE---VLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---CEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 45799999999999999999998876 89999863
No 377
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.55 E-value=0.036 Score=50.11 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=33.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
|+|+..+|.|||+|..|.+.|..|++.|+ .+|+++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 66667899999999999999999999887 359999987
No 378
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.44 E-value=0.042 Score=49.00 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=32.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|| +..+|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 1 Mm-~~~kV~VIGaG~mG~~iA~~la~~G~~---V~l~d~~~ 37 (283)
T 4e12_A 1 MT-GITNVTVLGTGVLGSQIAFQTAFHGFA---VTAYDINT 37 (283)
T ss_dssp CC-SCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCH
Confidence 54 457899999999999999999999986 99999874
No 379
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.41 E-value=0.09 Score=50.96 Aligned_cols=35 Identities=20% Similarity=0.441 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVA 43 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~ 43 (434)
+||+|||||++||+||..|++.|++ |+|+|+++..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~---v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFK---TLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCC---EEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCC---EEEEeCCCCC
Confidence 7999999999999999999999987 9999999764
No 380
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.23 E-value=0.046 Score=51.77 Aligned_cols=34 Identities=32% Similarity=0.367 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 6899999999999999999999999999987664
No 381
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.99 E-value=0.18 Score=50.10 Aligned_cols=38 Identities=13% Similarity=0.358 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
+.|||+|||+|..|...|..|++.|.+ |++||++++.+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~---vl~id~~~~~g 44 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQR---VLHVDSRSYYG 44 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCE---EEEEcCCCccc
Confidence 469999999999999999999999987 99999998743
No 382
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.92 E-value=0.056 Score=51.22 Aligned_cols=34 Identities=32% Similarity=0.377 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6899999999999999999999999999998765
No 383
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.91 E-value=0.046 Score=52.03 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~ 196 (434)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999875
No 384
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.90 E-value=0.062 Score=45.78 Aligned_cols=34 Identities=21% Similarity=0.485 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
+.++|+|||||..|...+..|.+.|.+ |+|++++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 457899999999999999999999876 9999986
No 385
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.86 E-value=0.11 Score=51.41 Aligned_cols=170 Identities=12% Similarity=0.080 Sum_probs=0.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC----------------------------------------
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV---------------------------------------- 42 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~---------------------------------------- 42 (434)
..+..++|+|.|..|...|..|.+.+.+ |+++|+++.
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~---vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~ 201 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHL---FVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLS 201 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCC---EEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSC
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCC
Q ss_pred ----------------------------------------------------CCCCCCccCccccCCCCCCCCCCccccc
Q 013914 43 ----------------------------------------------------APYERPALSKAYLFPEGTARLPGFHVCV 70 (434)
Q Consensus 43 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (434)
.....|.....++.......+..+...
T Consensus 202 D~~n~~~~~~ar~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~~~~~~~~~~~~~~l~e~~v~- 280 (565)
T 4gx0_A 202 DPDNANLCLTVRSLCQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHILDSFGNLQIAELPVH- 280 (565)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC-----------------------
T ss_pred cHHHHHHHHHHHHhcCceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccccccchhcccCCceEEEEEEC-
Q ss_pred CCCCCCCChhhHhhcCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHH
Q 013914 71 GSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDD 150 (434)
Q Consensus 71 ~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~ 150 (434)
+ .......+.+....-..+..+..+..+++.+.......+...-.++..|...........-+...+
T Consensus 281 ~---s~l~G~~l~el~~~~~~~~~vi~i~r~g~~~~p~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~---------- 347 (565)
T 4gx0_A 281 G---TPFAGKTIGESGIRQRTGLSIIGVWERGSLTTPQRETVLTEQSLLVLAGTKSQLAALEYLIGEAPE---------- 347 (565)
T ss_dssp ---------------------------------------------------------------------C----------
T ss_pred C---CccCCCCHHHcCcchhcCCEEEEEEECCEEeCCCCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCC----------
Q ss_pred HHHHHHHHHhCCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCc
Q 013914 151 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR 201 (434)
Q Consensus 151 ~~~~~~~l~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~ 201 (434)
. ++++|+|+|..|..+|..|.+.|.+|++++..+.....
T Consensus 348 -----------~-~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 348 -----------D-ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN 386 (565)
T ss_dssp -----------C-CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred -----------C-CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
No 386
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.79 E-value=0.07 Score=49.60 Aligned_cols=62 Identities=18% Similarity=0.214 Sum_probs=46.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC-CccCCccC-------------C------------HHHHHHHHHHH
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWCMPRLF-------------T------------ADIAAFYEGYY 215 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~-~~~~~~~~-------------~------------~~~~~~~~~~l 215 (434)
.+.+|+|||+|..|+-+|..|.+.|.+|+++++. +++..+.. . ......+.+.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~~ 122 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLALI 122 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHHH
Confidence 3578999999999999999999999999999988 55422110 0 12245677888
Q ss_pred HhcCcEEE
Q 013914 216 ANKGIKII 223 (434)
Q Consensus 216 ~~~GV~~~ 223 (434)
++.|++..
T Consensus 123 ~~lGl~~~ 130 (376)
T 2e1m_A 123 DKLGLKRR 130 (376)
T ss_dssp HHTTCCEE
T ss_pred HHcCCCcc
Confidence 89898654
No 387
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.78 E-value=0.077 Score=50.24 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=45.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCccCCcc----------------CCHHHHHHHHHHHHhcCcEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPRL----------------FTADIAAFYEGYYANKGIKII 223 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g-~~v~lv~~~~~~~~~~----------------~~~~~~~~~~~~l~~~GV~~~ 223 (434)
...+++|||+|..|+-+|..|.+.| .+|+++++.+++..+. +.. ....+.+.+++.|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-SYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-TCHHHHHHHHHHCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-CcHHHHHHHHHhCCccc
Confidence 3568999999999999999999999 9999999887653210 111 12346677788887653
No 388
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.75 E-value=0.12 Score=49.46 Aligned_cols=38 Identities=18% Similarity=0.330 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
..+||||||+|++||+||..|++.|++ |+|+|+++..+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~---V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKK---VLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCC
Confidence 468999999999999999999999987 99999998643
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.67 E-value=0.091 Score=43.27 Aligned_cols=34 Identities=24% Similarity=0.125 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-g~~~~~V~vie~~~ 41 (434)
..+|+|||+|..|...|..|.+. |.+ |+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~---V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKI---SLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSC---EEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCe---EEEEECCH
Confidence 35799999999999999999998 887 99999873
No 390
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.62 E-value=0.065 Score=49.44 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~ 197 (434)
..|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEG 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4799999999999999999999999999998853
No 391
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.62 E-value=0.076 Score=47.83 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+.+|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~---V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHT---VVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 356899999999999999999999886 99999874
No 392
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.61 E-value=0.082 Score=51.25 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=56.0
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013914 162 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 240 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e-~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~ 240 (434)
..+++.|||-|-+|+. +|..|.+.|.+|+..+..+ .+ ..+.|++.|++++.+.....
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~-------~~-----~~~~l~~~gi~~~~g~~~~~---------- 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP-------NS-----VTQHLTALGAQIYFHHRPEN---------- 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC-------CH-----HHHHHHHTTCEEESSCCGGG----------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC-------CH-----HHHHHHHCCCEEECCCCHHH----------
Confidence 3589999999999996 7999999999999987542 12 22457888999987642110
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhh
Q 013914 241 EVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 241 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
+ ..+|+||+++|..+....+
T Consensus 79 ---~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ---V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ---G-----TTCSEEEECTTSCTTCHHH
T ss_pred ---c-----CCCCEEEECCCCCCCCHHH
Confidence 0 1389999999987765443
No 393
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.51 E-value=0.082 Score=49.07 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~ 196 (434)
+.++|||+|..|+++|..+++.|.+|+++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999765
No 394
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.49 E-value=0.067 Score=50.79 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999987654
No 395
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.45 E-value=0.067 Score=51.54 Aligned_cols=35 Identities=31% Similarity=0.349 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~--~v~lv~~~~~~ 198 (434)
++|+|||+|.+|+-+|..|.+.|. +|+++++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999987654
No 396
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.41 E-value=0.11 Score=41.50 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
...+++|+|+|.+|..++..|.+.|.+|+++++.+..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 5689999999999999999999999999999876443
No 397
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.37 E-value=0.079 Score=50.44 Aligned_cols=40 Identities=13% Similarity=0.312 Sum_probs=35.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAP 44 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~ 44 (434)
|++.+||+|||+|++|+++|..|++.|.+ |+|+|+++..+
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~---v~~~e~~~~~g 42 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKK---VLHMDRNPYYG 42 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEecCCCcc
Confidence 44578999999999999999999999987 99999987643
No 398
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.34 E-value=0.075 Score=49.10 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=29.7
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
||+ +.+|.|||+|..|...|..|++.|.+ |++++++
T Consensus 1 mm~-~mki~iiG~G~~G~~~a~~L~~~g~~---V~~~~r~ 36 (359)
T 1bg6_A 1 MIE-SKTYAVLGLGNGGHAFAAYLALKGQS---VLAWDID 36 (359)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCC-cCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 554 46899999999999999999998875 9999876
No 399
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.30 E-value=0.078 Score=49.57 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 36999999999999999999999999999998754
No 400
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.29 E-value=0.093 Score=48.42 Aligned_cols=38 Identities=29% Similarity=0.308 Sum_probs=31.7
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|.+++++|.|||+|.-|.+.|..|++.|.+ |+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~---V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQK---VRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCC---EEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 334457899999999999999999999876 99999873
No 401
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.27 E-value=0.091 Score=50.84 Aligned_cols=37 Identities=24% Similarity=0.272 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~ 199 (434)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 5689999999999999999999999999999887643
No 402
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.21 E-value=0.081 Score=49.60 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 37999999999999999999999999999987543
No 403
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.20 E-value=0.093 Score=44.64 Aligned_cols=32 Identities=34% Similarity=0.553 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 7 dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+|+|+|+|..|...|..|.+.|.+ |+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~---v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYG---VVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCC---EEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 699999999999999999999886 99999873
No 404
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.13 E-value=0.065 Score=52.13 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHh-CCCeEEEEccCCccC
Q 013914 165 KAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCM 199 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~-~g~~v~lv~~~~~~~ 199 (434)
.|+|||+|.+|+-+|..|++ .|.+|+++++.+++.
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 58999999999999999987 599999999887754
No 405
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.13 E-value=0.086 Score=51.48 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g-~~v~lv~~~~~~ 198 (434)
..+|+|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 358999999999999999999999 999999987654
No 406
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.12 E-value=0.097 Score=51.14 Aligned_cols=61 Identities=20% Similarity=0.228 Sum_probs=46.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCcc-----------------CCHHHHHHHHHHHHhcCcEEEc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----------------FTADIAAFYEGYYANKGIKIIK 224 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~GV~~~~ 224 (434)
..+|+|||+|..|+-+|..|++.|.+|+++++.+++..+. +... ...+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 3589999999999999999999999999999987763221 1111 34566778888987653
No 407
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.10 E-value=0.081 Score=50.01 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~ 196 (434)
..|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 408
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.08 E-value=0.11 Score=47.14 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++.+|+|||+|..|.+.|..|+..+. ..+|.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 45799999999999999999999875 34699999863
No 409
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.08 E-value=0.098 Score=47.50 Aligned_cols=39 Identities=26% Similarity=0.406 Sum_probs=32.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
|+++..+|.|||+|..|.+.|..|+..+. ..+++++|.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 66667899999999999999999999876 2359999975
No 410
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.02 E-value=0.091 Score=49.00 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~ 197 (434)
..|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3799999999999999999999999999998653
No 411
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.94 E-value=0.11 Score=49.95 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=32.0
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|+|+..+|.|||+|.-|...|..|++.|++ |+++|++.
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~---V~l~D~~~ 38 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQ---VLLYDISA 38 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 555567899999999999999999999987 99999874
No 412
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.93 E-value=0.098 Score=48.68 Aligned_cols=33 Identities=24% Similarity=0.500 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~ 196 (434)
..|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999873
No 413
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=92.92 E-value=0.062 Score=52.63 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHh------------CCCeEEEEccCCc
Q 013914 163 NGKAVVVGGGYIGLELSAALKI------------NNIDVSMVYPEPW 197 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~------------~g~~v~lv~~~~~ 197 (434)
..+|+|||+|+.|+-+|..|++ .|.+|+++++.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 4689999999999999999999 8999999998643
No 414
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.92 E-value=0.41 Score=37.26 Aligned_cols=77 Identities=17% Similarity=0.234 Sum_probs=51.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 242 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v 242 (434)
.++++|+|.|..|..++..|.+.|.+|+++++. ++..+ .+++.|+.++.+..- +.. .+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~---------~~~~~----~~~~~g~~~i~gd~~-------~~~--~l 64 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS---------RTRVD----ELRERGVRAVLGNAA-------NEE--IM 64 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC---------HHHHH----HHHHTTCEEEESCTT-------SHH--HH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC---------HHHHH----HHHHcCCCEEECCCC-------CHH--HH
Confidence 468999999999999999999999999999863 33332 244567776544210 000 00
Q ss_pred EeCCCcEEECCEEEEcccCcc
Q 013914 243 KLKDGRTLEADIVVVGVGGRP 263 (434)
Q Consensus 243 ~~~~g~~~~~D~vi~a~G~~p 263 (434)
. .-+ .-.+|.+|++++...
T Consensus 65 ~-~a~-i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 65 Q-LAH-LECAKWLILTIPNGY 83 (140)
T ss_dssp H-HTT-GGGCSEEEECCSCHH
T ss_pred H-hcC-cccCCEEEEECCChH
Confidence 0 001 125899999999654
No 415
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.84 E-value=0.042 Score=52.49 Aligned_cols=77 Identities=14% Similarity=0.127 Sum_probs=54.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 241 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~ 241 (434)
.++++.|+|.|.+|+..|..|.+.|.+|+..+..+.... . ..++ .|++++.+... . . .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~---~--------~~l~-~G~~~~~g~~~----~---~---~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L--------DKLP-EAVERHTGSLN----D---E---W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT---G--------GGSC-TTSCEEESSCC----H---H---H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch---h--------HHhh-CCCEEEECCCc----H---H---H
Confidence 468999999999999999999999999999987653211 1 2345 68888766421 0 0 0
Q ss_pred EEeCCCcEEECCEEEEcccCccChhh
Q 013914 242 VKLKDGRTLEADIVVVGVGGRPLISL 267 (434)
Q Consensus 242 v~~~~g~~~~~D~vi~a~G~~p~~~~ 267 (434)
+. .+|.||+++|..|....
T Consensus 62 --~~-----~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 62 --LM-----AADLIVASPGIALAHPS 80 (439)
T ss_dssp --HH-----TCSEEEECTTSCTTCHH
T ss_pred --hc-----cCCEEEeCCCCCCCCHH
Confidence 01 37899999998765443
No 416
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.80 E-value=0.069 Score=45.61 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=29.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEE-EeCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKE 40 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~v-ie~~ 40 (434)
|++++|.|||+|.-|.+.|..|.+.|++ |++ ++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~---V~~v~~r~ 56 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIP---AIIANSRG 56 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCC---EEEECTTC
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCE---EEEEECCC
Confidence 3356899999999999999999998876 887 6665
No 417
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.76 E-value=0.11 Score=48.02 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~ 195 (434)
...|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 357999999999999999999999999999875
No 418
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.75 E-value=0.11 Score=50.00 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
...+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 3578999999999999999999999999999988764
No 419
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.69 E-value=0.1 Score=48.43 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.+.|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 579999999999999999999 59999999988644
No 420
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.62 E-value=0.15 Score=46.10 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=31.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|+...+|.|||+|.-|...|..|.+.|++ |++++++.
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g~~---V~~~~~~~ 63 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLKMGHT---VTVWNRTA 63 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSG
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 34457899999999999999999998876 99998763
No 421
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.58 E-value=0.1 Score=49.80 Aligned_cols=130 Identities=14% Similarity=0.179 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCCCccCccccCCCCCCCCCCcccccCCCCCCCChhhHhh
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 84 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
.++|+|||.|.+|+++|..|+++|++ |+++|.....+ ....++
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~---v~~~D~~~~~~---------------------------------~~~~l~- 47 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVT---PRVMDTRMTPP---------------------------------GLDKLP- 47 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCC---CEEEESSSSCT---------------------------------TGGGSC-
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCE---EEEEECCCCcc---------------------------------hhHHhh-
Confidence 46899999999999999999999987 89999875311 012233
Q ss_pred cCcEEEcCCeeEEEECCCCEEEccCCcEEEcceEEEecCCCcccccCCCCCCCCCCCeEEecCHHHHHHHHHHHHhCCCC
Q 013914 85 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNG 164 (434)
Q Consensus 85 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~l~~~~~~ 164 (434)
.|+++..++.. ...+ . .+|.+|+++|..+..|. +......++-.+...+- +... .+.+
T Consensus 48 ~G~~~~~g~~~------~~~~------~-~~d~vV~s~gi~~~~p~---~~~a~~~~~~v~~~~~~---~~~~---~~~~ 105 (439)
T 2x5o_A 48 EAVERHTGSLN------DEWL------M-AADLIVASPGIALAHPS---LSAAADAGIEIVGDIEL---FCRE---AQAP 105 (439)
T ss_dssp TTSCEEESSCC------HHHH------H-TCSEEEECTTSCTTCHH---HHHHHHTTCEEECHHHH---HHHH---CCSC
T ss_pred CCCEEEECCCc------HHHh------c-cCCEEEeCCCCCCCCHH---HHHHHHCCCcEEEHHHH---HHHh---cCCC
Confidence 46666655311 0000 0 36889999997665443 22211122222332222 2222 2345
Q ss_pred cEEEECCC---HHHHHHHHHHHhCCCeEEEEc
Q 013914 165 KAVVVGGG---YIGLELSAALKINNIDVSMVY 193 (434)
Q Consensus 165 ~v~ViG~g---~~~~e~a~~l~~~g~~v~lv~ 193 (434)
.+.|-|+. -+..-++..|...|.++.+..
T Consensus 106 vI~VTGTnGKTTT~~ml~~iL~~~g~~~~~~g 137 (439)
T 2x5o_A 106 IVAITGSNGKSTVTTLVGEMAKAAGVNVGVGG 137 (439)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 66777753 345567777888888876543
No 422
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.56 E-value=0.13 Score=46.82 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~~ 41 (434)
+.+|.|||+|..|.+.|..|++.|+ + |+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~---V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELAD---VVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCE---EEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe---EEEEECCh
Confidence 3689999999999999999999886 4 99999874
No 423
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.55 E-value=0.3 Score=44.25 Aligned_cols=83 Identities=20% Similarity=0.132 Sum_probs=52.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEc-CCeEEEEEecCCCcEEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIK-GTVAVGFTTNADGEVKEV 242 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~-~~~v~~i~~~~~g~v~~v 242 (434)
.++.|+|+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. ...-..+.. ..+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~Gl~~~~~~~g~~~~~~------~~~ 61 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD----------Y-----ETVKAKGIRIRSATLGDYTFRP------AAV 61 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT----------H-----HHHHHHCEEEEETTTCCEEECC------SCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh----------H-----HHHHhCCcEEeecCCCcEEEee------eee
Confidence 479999999999999999999999999997642 0 345666776543 110001100 011
Q ss_pred EeCCCc-EE-ECCEEEEcccCccChhhh
Q 013914 243 KLKDGR-TL-EADIVVVGVGGRPLISLF 268 (434)
Q Consensus 243 ~~~~g~-~~-~~D~vi~a~G~~p~~~~~ 268 (434)
. .+-. .. .+|+||+|+-.....+.+
T Consensus 62 ~-~~~~~~~~~~DlVilavK~~~~~~~l 88 (320)
T 3i83_A 62 V-RSAAELETKPDCTLLCIKVVEGADRV 88 (320)
T ss_dssp E-SCGGGCSSCCSEEEECCCCCTTCCHH
T ss_pred E-CCHHHcCCCCCEEEEecCCCChHHHH
Confidence 1 1211 12 589999999876655444
No 424
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.55 E-value=0.059 Score=47.45 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+.|+|||||..|...+..|.+.|.+ |+|++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~---VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCK---LTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCE---EEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCE---EEEEcCCC
Confidence 357899999999999999999999876 99999863
No 425
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.50 E-value=0.18 Score=40.00 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~ 195 (434)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 578999999999999999999999999999864
No 426
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.50 E-value=0.13 Score=47.94 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|.+|+.+|..|...|.+ |+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAV---VSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 46899999999999999999999875 99999874
No 427
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.48 E-value=0.094 Score=47.04 Aligned_cols=34 Identities=12% Similarity=0.068 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~---V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGG---VTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTC---EEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 46899999999999999999999986 99998874
No 428
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.45 E-value=0.13 Score=46.58 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+..+|.|||+|..|.+.|..|++.|+. +|+++|.+.
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~~ 38 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIAE 38 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCc
Confidence 356899999999999999999998862 299999874
No 429
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.39 E-value=0.15 Score=46.20 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+..+|.|||+|.-|...|..|++.|++ |+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~---V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 357899999999999999999999987 99999874
No 430
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.38 E-value=0.13 Score=48.14 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.+++|||+|.+|+.+|..|.+.|.+|+++++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 47999999999999999999999999999987655
No 431
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.30 E-value=0.14 Score=47.19 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|||+|+|.||+.+|..|...|.+ +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 46899999999999999999999974 399999984
No 432
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.29 E-value=0.15 Score=49.45 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM 199 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~ 199 (434)
..+++|||+|..|+-+|..|.+.|.+|+++++.+++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4689999999999999999999999999999987763
No 433
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.29 E-value=0.16 Score=47.02 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
++|+|||||..|..++..+++.|++ |+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~---vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMK---VVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCC
Confidence 6899999999999999999999998 899998764
No 434
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.27 E-value=0.14 Score=47.11 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|||+|+|.+|..+|..|...|.+ +|+++|++.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCC
Confidence 57899999999999999999999864 399999983
No 435
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.22 E-value=0.14 Score=47.30 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=30.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 2 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
|+++++|.|||.|.-|...|..|++.|++ |++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~---V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHE---CVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 44567899999999999999999999976 99998873
No 436
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.16 E-value=0.14 Score=47.86 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 347999999999999999999999999999987664
No 437
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.14 E-value=0.15 Score=48.67 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999987665
No 438
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.04 E-value=0.15 Score=48.55 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~-~v~lv~~~~~~ 198 (434)
...|+|||+|..|+-+|..|++.|. +|+++++.+..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3579999999999999999999999 99999987653
No 439
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=92.03 E-value=0.15 Score=48.71 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..|+|||+|+.|+.+|..|++.|.+|+++++.+.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKL 61 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 57999999999999999999999999999987643
No 440
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.98 E-value=0.14 Score=47.32 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|..|+.+|..|+..|.+ |+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAK---TTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999999875 99999874
No 441
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.95 E-value=0.17 Score=45.89 Aligned_cols=36 Identities=17% Similarity=0.330 Sum_probs=30.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.+.+|.|||+|..|...|..|+..|+- +|+++|.+.
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~~ 38 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIVK 38 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCH
Confidence 356899999999999999999998862 299999863
No 442
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.84 E-value=0.17 Score=39.46 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~ 195 (434)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999853
No 443
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.70 E-value=0.13 Score=48.22 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CC-CeEEEEccCC
Q 013914 164 GKAVVVGGGYIGLELSAALKI-NN-IDVSMVYPEP 196 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~-~g-~~v~lv~~~~ 196 (434)
..|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999875
No 444
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.69 E-value=0.16 Score=47.67 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~-g~~v~lv~~~~~~ 198 (434)
..+++|||+|..|+-+|..|.+. |.+|+++++.+++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 35899999999999999999998 9999999987654
No 445
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.64 E-value=0.2 Score=45.74 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~---V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEA---INVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCC---EEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCE---EEEEECh
Confidence 45899999999999999999999876 9999874
No 446
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.61 E-value=0.15 Score=46.06 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.++|.|||+|..|..+|..++..|.+|++++..+..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~ 41 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQ 41 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 578999999999999999999999999999876544
No 447
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.55 E-value=0.18 Score=50.99 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 58999999999999999999999999999986443
No 448
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.52 E-value=0.17 Score=51.24 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 164 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 58999999999999999999999999999986543
No 449
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.50 E-value=0.2 Score=49.33 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCC
Q 013914 163 NGKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~---~g~~v~lv~~~~ 196 (434)
..+|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 999999999864
No 450
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.50 E-value=0.18 Score=49.44 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCC
Q 013914 163 NGKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~---~g~~v~lv~~~~ 196 (434)
..+|+|||+|+.|+.+|..|++ .|.+|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4689999999999999999999 999999999864
No 451
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.35 E-value=0.24 Score=44.84 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=30.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
++.+|+|||+|..|.+.|..|+..+. ..+|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 45799999999999999999998775 3459999875
No 452
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.30 E-value=0.38 Score=43.57 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=0.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013914 161 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 240 (434)
Q Consensus 161 ~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~ 240 (434)
....++.|||+|.+|.-+|..|.+.|.+|+++ +.+... +.+++.|+.+. ......... .
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~-------------~~i~~~g~~~~-~~~~~~~~~------~ 75 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHV-------------QAIEATGLRLE-TQSFDEQVK------V 75 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHH-------------HHHHHHCEEEE-CSSCEEEEC------C
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHH-------------HHHHhCCeEEE-cCCCcEEEe------e
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhhhccccc-cCCcEEe
Q 013914 241 EVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIET 281 (434)
Q Consensus 241 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~v 281 (434)
....+....-.+|.||+|+......+.++.-... ..+.+.+
T Consensus 76 ~~~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv 117 (318)
T 3hwr_A 76 SASSDPSAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVL 117 (318)
T ss_dssp EEESCGGGGTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEE
T ss_pred eeeCCHHHcCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEE
No 453
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=91.28 E-value=0.17 Score=46.87 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
+++|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987654
No 454
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=91.19 E-value=0.24 Score=49.95 Aligned_cols=37 Identities=27% Similarity=0.512 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
..++++|||+|+.|+.+|..|.+.|.+|+++++.+++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3579999999999999999999999999999987654
No 455
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.15 E-value=0.14 Score=46.96 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCC------CeEEEEccCC
Q 013914 165 KAVVVGGGYIGLELSAALKINN------IDVSMVYPEP 196 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g------~~v~lv~~~~ 196 (434)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999864
No 456
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.11 E-value=0.31 Score=44.11 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=0.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcC-CeEEEEEecCCCcEEE
Q 013914 164 GKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKG-TVAVGFTTNADGEVKE 241 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g-~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~-~~v~~i~~~~~g~v~~ 241 (434)
.++.|||.|..|.-+|..|.+.| .+|+++++.+....+ .+...+.+.+.|+ .. +.-..+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~------~~~~~~~~~~~g~---~~~s~~e~~~~-------- 87 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAA------SGALRARAAELGV---EPLDDVAGIAC-------- 87 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTT------HHHHHHHHHHTTC---EEESSGGGGGG--------
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccc------hHHHHHHHHHCCC---CCCCHHHHHhc--------
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhhhccccc-cCCcEEeC
Q 013914 242 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETD 282 (434)
Q Consensus 242 v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd 282 (434)
+|.|++|+......+.+..-... ..+.+.+|
T Consensus 88 ----------aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 88 ----------ADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp ----------CSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ----------CCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
No 457
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.10 E-value=0.2 Score=45.09 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=29.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
++|.|||+|.-|...|..|++.|++ |++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~---V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGND---VTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCc---EEEEECC
Confidence 4799999999999999999998875 9999886
No 458
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=91.10 E-value=0.23 Score=51.36 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 197 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~ 197 (434)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 46899999999999999999999999999997754
No 459
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.07 E-value=0.21 Score=43.44 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..+|+|||+|..|..+|..|++.|.. +++++|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCCc
Confidence 36899999999999999999999964 4999999854
No 460
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.05 E-value=0.21 Score=44.66 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++|.|||+|.-|.+.|..|++.|.+ |++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~---V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPH---TTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTT---CEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCe---EEEEEecc
Confidence 4799999999999999999998875 99999873
No 461
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.04 E-value=0.22 Score=45.21 Aligned_cols=32 Identities=19% Similarity=0.467 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHC---VSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCE---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 4799999999999999999998875 9999886
No 462
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.93 E-value=0.27 Score=44.33 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|.|||+|.-|..-|..++..|++ |+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~---V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe---EEEEECCH
Confidence 46899999999999999999999998 99999874
No 463
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.90 E-value=0.18 Score=48.45 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCc
Q 013914 164 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPW 197 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~~g--~~v~lv~~~~~ 197 (434)
.+++|||+|.+|+-+|..|.+.| .+|+++++.++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 58999999999999999999999 99999998654
No 464
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.83 E-value=0.42 Score=46.59 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=56.3
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013914 162 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 240 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e-~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~ 240 (434)
+.+++.+||-|-+|+- +|..|.+.|.+|+..+..+. ++ ..+.|++.|++++.+.....+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~--------- 77 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL--------- 77 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc---------
Confidence 5789999999999997 68889999999999886532 11 235577889998866421111
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhh
Q 013914 241 EVKLKDGRTLEADIVVVGVGGRPLISLF 268 (434)
Q Consensus 241 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 268 (434)
. -.+|+||..+|..+....+
T Consensus 78 ----~----~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 ----Q----PAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp ----C----SCCSEEEECTTCCTTSHHH
T ss_pred ----C----CCCCEEEECCCcCCCCHHH
Confidence 0 1378999999987766544
No 465
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.80 E-value=0.32 Score=37.60 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=28.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYP 194 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~ 194 (434)
..+++|+|+|.+|..++..|.+.|.+|+++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 35899999999999999999999999999875
No 466
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.71 E-value=0.25 Score=44.90 Aligned_cols=38 Identities=24% Similarity=0.246 Sum_probs=29.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCC-CCcEEEEeCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVK-PGELAIISKE 40 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~-~~~V~vie~~ 40 (434)
+++++|.|||+|.-|.+.|..|.+.|.. ..+|++++++
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 3456899999999999999999998821 1238888876
No 467
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.70 E-value=0.21 Score=45.06 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=29.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEeCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKE 40 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~~V~vie~~ 40 (434)
.+.+|.|||.|.-|...|..|++.|+ + |++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~---V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAID---MAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCE---EEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCe---EEEEcCC
Confidence 35789999999999999999999997 5 9999886
No 468
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.68 E-value=0.24 Score=44.79 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=28.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGED---VHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCC---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCe---EEEEEcC
Confidence 4799999999999999999998876 9999886
No 469
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.67 E-value=0.35 Score=44.96 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..++|.|||+|.-|...+..+++.|++ |++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~---viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYK---VVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEECCCC
Confidence 357899999999999999999999987 899988754
No 470
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.59 E-value=0.26 Score=44.32 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+++|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~---V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLS---TWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe---EEEEECCH
Confidence 46899999999999999999999986 99998863
No 471
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.57 E-value=0.17 Score=45.74 Aligned_cols=36 Identities=25% Similarity=0.498 Sum_probs=28.8
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHc-----C-CCCCcEEEEeC
Q 013914 1 MAEKSFKYVILGGGVSAGYAAREFAKQ-----G-VKPGELAIISK 39 (434)
Q Consensus 1 M~~~~~dvvIIG~G~aGl~aA~~l~~~-----g-~~~~~V~vie~ 39 (434)
|..++++|.|||+|.-|...|..|++. | .+ |+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~---V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLE---VSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEE---EEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCC---EEEEEc
Confidence 333345899999999999999999998 7 65 999976
No 472
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.44 E-value=0.25 Score=46.30 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|.+|+.++..++..|.+ |+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAI---VRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 46899999999999999999998875 99999874
No 473
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.40 E-value=0.37 Score=42.70 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+++|+|.|+|..|...+..|.+.|.+ |+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~---V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHE---VTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCc
Confidence 45799999999999999999999886 99998874
No 474
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.30 E-value=0.17 Score=49.25 Aligned_cols=33 Identities=36% Similarity=0.541 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCC
Q 013914 164 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 196 (434)
Q Consensus 164 ~~v~ViG~g~~~~e~a~~l~~---~g~~v~lv~~~~ 196 (434)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999999864
No 475
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.28 E-value=0.27 Score=44.46 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++|+|||+|..|...|..|++.|. ..+|++++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 589999999999999999999886 12499999863
No 476
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.24 E-value=0.32 Score=37.78 Aligned_cols=34 Identities=26% Similarity=0.236 Sum_probs=30.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~ 195 (434)
..++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999988753
No 477
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.23 E-value=0.32 Score=46.97 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCcc
Q 013914 163 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 198 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g-~~v~lv~~~~~~ 198 (434)
..+++|||+|..|+-+|..|.+.| .+|+++++.+++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 799999988654
No 478
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.23 E-value=0.3 Score=36.41 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=29.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPE 195 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g-~~v~lv~~~ 195 (434)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 889888764
No 479
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.19 E-value=0.3 Score=45.55 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||+|.+|+.++..++..|.+ |+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAV---VMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 46899999999999999999998875 99999874
No 480
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.19 E-value=0.22 Score=43.75 Aligned_cols=34 Identities=26% Similarity=0.539 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013914 162 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 195 (434)
Q Consensus 162 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~ 195 (434)
.+++++|||+|.+|...+..|.+.|.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4789999999999999999999999999999864
No 481
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.14 E-value=0.23 Score=47.61 Aligned_cols=36 Identities=25% Similarity=0.117 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CC-CCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQ-GV-KPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~-~~~~V~vie~~~~ 42 (434)
+.++|.|||.|.-|+..|..|++. |+ + |+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~---V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEK---VLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCE---EEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCe---EEEEECChh
Confidence 346899999999999999999999 88 6 999999854
No 482
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=90.11 E-value=0.41 Score=44.70 Aligned_cols=36 Identities=22% Similarity=0.269 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
..++|+|||+|..|...+..+++.|++ |.+++.++.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~---vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYK---IAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCC
Confidence 346899999999999999999999987 899987654
No 483
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.08 E-value=0.35 Score=40.73 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|.|||+|.-|.+.|..|++.|.+ |+++++++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~---V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHE---VTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCE---EEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCCH
Confidence 35799999999999999999998875 99998874
No 484
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.05 E-value=0.36 Score=45.47 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|||.|..|...|..|.+.|.+ |++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~---vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVK---MVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEECCH
Confidence 45799999999999999999999987 99999984
No 485
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.91 E-value=0.33 Score=44.83 Aligned_cols=34 Identities=35% Similarity=0.417 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|+|+|+|.+|+.++..|+..|.+ |+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~---V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQ---VQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCH
Confidence 36899999999999999999998874 99999873
No 486
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.83 E-value=0.27 Score=41.78 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=30.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~-G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++++|+|.|| |..|...+..|.+.|.+ |.++.++.
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRHP 38 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSCG
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcCc
Confidence 3568999995 99999999999998876 99999874
No 487
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=89.82 E-value=0.31 Score=47.41 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 198 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~ 198 (434)
.|+|||+|..|+-+|..+++.|.+|+++++.+..
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 6899999999999999999999999999987654
No 488
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.74 E-value=0.98 Score=40.55 Aligned_cols=72 Identities=25% Similarity=0.323 Sum_probs=0.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCccCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe
Q 013914 165 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL 244 (434)
Q Consensus 165 ~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~~~~~~~~~~~~~~~~~~~l~~~GV~~~~~~~v~~i~~~~~g~v~~v~~ 244 (434)
++.|||+|.+|.-+|..|. .|.+|+++.|. ..-.+.+++.|+.+...... .. ..+..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~-------------~~~~~~l~~~G~~~~~~~~~---~~------~~~~~ 60 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR-------------QEQAAAIQSEGIRLYKGGEE---FR------ADCSA 60 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSC-------------HHHHHHHHHHCEEEEETTEE---EE------ECCEE
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECC-------------HHHHHHHHhCCceEecCCCe---ec------ccccc
Q ss_pred CCCcEEECCEEEEcc
Q 013914 245 KDGRTLEADIVVVGV 259 (434)
Q Consensus 245 ~~g~~~~~D~vi~a~ 259 (434)
.....-.+|+||+|+
T Consensus 61 ~~~~~~~~D~vilav 75 (307)
T 3ego_A 61 DTSINSDFDLLVVTV 75 (307)
T ss_dssp ESSCCSCCSEEEECC
T ss_pred cccccCCCCEEEEEe
No 489
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=89.72 E-value=0.2 Score=47.91 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=27.5
Q ss_pred CCCCCCcEEEECCCHH-HHHHHHHHHHc--CCCCCcEEEEeCCC
Q 013914 1 MAEKSFKYVILGGGVS-AGYAAREFAKQ--GVKPGELAIISKEA 41 (434)
Q Consensus 1 M~~~~~dvvIIG~G~a-Gl~aA~~l~~~--g~~~~~V~vie~~~ 41 (434)
|||++.+|.|||+|.. |.+.|..|.+. +++..+|+++|.+.
T Consensus 24 m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~ 67 (472)
T 1u8x_X 24 MKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK 67 (472)
T ss_dssp --CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH
Confidence 5555679999999986 33346567776 44334599999874
No 490
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=89.68 E-value=0.29 Score=48.22 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013914 163 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 196 (434)
Q Consensus 163 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~lv~~~~ 196 (434)
.-.|+|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3579999999999999999999999999999874
No 491
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.67 E-value=0.38 Score=42.72 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=29.0
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013914 6 FKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKE 40 (434)
Q Consensus 6 ~dvvIIG~-G~aGl~aA~~l~~~g~~~~~V~vie~~ 40 (434)
.+|.|||+ |.-|...|..|.+.|++ |++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~---V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHH---LAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSE---EEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECC
Confidence 58999999 99999999999998875 9999876
No 492
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.63 E-value=0.27 Score=47.16 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~--g~~~~~V~vie~~~ 41 (434)
+++|.|||.|..|+..|..|++. |++ |++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~---V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIR---VTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSE---EEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCE---EEEEECCH
Confidence 46899999999999999999998 555 99999874
No 493
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.61 E-value=0.43 Score=43.10 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
..+|.|||.|.-|.+.|..|++.|+ ..+|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCH
Confidence 3689999999999999999999987 22489998873
No 494
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=89.56 E-value=0.4 Score=44.99 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=31.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCCC
Q 013914 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAV 42 (434)
Q Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~~ 42 (434)
|+.++|.|+|+|..|...+..+++.|++ |.+++ .+.
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~~---v~~~d-~~~ 57 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNIQ---VNVLD-ADN 57 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCE---EEEEE-STT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEEE-CCC
Confidence 3467899999999999999999999997 88998 543
No 495
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.53 E-value=0.39 Score=42.11 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=29.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
.++++|||+|-+|.+++..|.+.|.+ |+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~---v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQ---VSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCH
Confidence 36899999999999999999999844 99998873
No 496
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.46 E-value=0.38 Score=43.35 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+.+|.|||.|.-|...|..|++.|++ |+++++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~---V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFK---VTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCe---EEEEeCCH
Confidence 46899999999999999999999986 99998873
No 497
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.44 E-value=0.34 Score=46.16 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
++|.|||.|.-|+..|..|++.|++ |+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 4799999999999999999999886 99999874
No 498
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.40 E-value=0.39 Score=43.46 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+..+|.|||+|..|.+.|..|+..++ . +|+++|.+.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~-~-~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKEL-G-DVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCC-C-eEEEEeCCc
Confidence 45689999999999999999999887 2 599999874
No 499
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.35 E-value=0.45 Score=42.17 Aligned_cols=37 Identities=16% Similarity=0.358 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
+++|.|||+|.-|.+.|..|.+.|++..+|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999987333599998873
No 500
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.19 E-value=0.44 Score=43.36 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=31.6
Q ss_pred CCCCCCcEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEeCCC
Q 013914 1 MAEKSFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKEA 41 (434)
Q Consensus 1 M~~~~~dvvIIG~-G~aGl~aA~~l~~~g~~~~~V~vie~~~ 41 (434)
||++++.|+|.|| |..|...+..|.+.|.+ |+++++..
T Consensus 1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~ 39 (341)
T 3enk_A 1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLV 39 (341)
T ss_dssp -CCSSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCS
T ss_pred CCCCCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCC
Confidence 5666678999985 99999999999999876 99998764
Done!