Query 013919
Match_columns 434
No_of_seqs 150 out of 1382
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 19:33:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013919.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013919hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.9 1.1E-19 3.9E-24 179.8 34.2 368 42-423 6-402 (445)
2 3gia_A Uncharacterized protein 99.8 5.1E-17 1.7E-21 160.6 30.3 343 42-399 4-369 (444)
3 4djk_A Probable glutamate/gamm 99.7 3.6E-14 1.2E-18 142.7 33.5 241 40-289 7-262 (511)
4 2jln_A MHP1; hydantoin, transp 99.0 2.4E-07 8.3E-12 92.1 27.7 329 43-385 24-376 (501)
5 3dh4_A Sodium/glucose cotransp 98.6 5.3E-05 1.8E-09 75.9 29.9 150 40-202 16-168 (530)
6 2xq2_A Sodium/glucose cotransp 98.3 0.0015 5.2E-08 66.2 30.4 146 42-200 47-195 (593)
7 2a65_A Leutaa, Na(+):neurotran 97.7 0.053 1.8E-06 53.5 32.9 220 46-267 9-281 (519)
8 4b4a_A TATC, SEC-independent p 64.0 73 0.0025 27.7 13.7 96 302-397 58-176 (249)
9 3l1l_A Arginine/agmatine antip 22.4 4.6E+02 0.016 24.2 14.2 47 106-152 259-305 (445)
10 2wsw_A BCCT family betaine/car 16.8 7.1E+02 0.024 24.0 23.5 24 44-67 89-112 (509)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.88 E-value=1.1e-19 Score=179.77 Aligned_cols=368 Identities=10% Similarity=0.073 Sum_probs=229.1
Q ss_pred CCCCCchHHHHHHHHHhhhccccchhHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhcccch
Q 013919 42 IAHGCSFTQTIFNGINVMAGVGLLSTPYTVKEAGWASLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKYG 121 (434)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gil~lP~a~~~~G~~g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~~~ 121 (434)
.+|+.|.++.++..+++++|+|++.+|...++.|..+++.+++.++.....+..+.|...+.|+..+..++.++.+||+.
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~~ 85 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFL 85 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHHH
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCChH
Confidence 34679999999999999999999999998888887788888999999999999999999999998899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhhHHHHHHH
Q 013919 122 RLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVVAT 201 (434)
Q Consensus 122 ~~~~~~~~~~~~~g~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~~~~ 201 (434)
+++..+...+.......++....++++...++.... ........+..+++.-....++.+...+++.......
T Consensus 86 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~ 158 (445)
T 3l1l_A 86 GYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD-------PWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLA 158 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGS-------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccc-------cHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 999999998887777778888888888776553210 0011222222333333444567777777776655544
Q ss_pred HHHHHhhhhcccc--cccccCC---CCccccccchhhHHHHHHHhccCccchhhHHhhccchh-hhHHHHHHHHHHHHHH
Q 013919 202 ILIVLCVLFLGTI--EGIGFHP---TGQVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKALITCFALCVLI 275 (434)
Q Consensus 202 ~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~s~~~~~~~ 275 (434)
+...+.+...... +...... +....++.++..++....|+|.|.+.+....+|+|||+ +.+|++..+..++.++
T Consensus 159 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~ 238 (445)
T 3l1l_A 159 LIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVC 238 (445)
T ss_dssp HHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHHH
Confidence 4433333322221 1111111 01112356788899999999999999999999999996 7999999999999999
Q ss_pred HHHHHhHHHHhhcCCchhh----h---hhcCCCchhHHHHHHHHHHHHHhhhhcchhcchHHHH-----HhhcCCC----
Q 013919 276 YGGVAVMGFLMFGQGTLSQ----I---TLNMPPHAFASKVAVWTTVINPFTKYALLMNPLARSI-----EELLPAG---- 339 (434)
Q Consensus 276 Y~~~g~~gy~~fg~~~~~~----i---l~~~~~~~~~~~v~~~~~~~~~~~s~pl~~~~~~~~~-----~~~~~~~---- 339 (434)
|++..+......+.+...+ . ..... +++...+..+...+..+.+.--..+...|.+ ++.+|+.
T Consensus 239 y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~~~~~ 317 (445)
T 3l1l_A 239 YVLSTTAIMGMIPNAALRVSASPFGDAARMAL-GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARV 317 (445)
T ss_dssp HHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHH-CTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSCGGGGCC
T ss_pred HHHHHHHHHhcCCHHHHhccCcHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHhc
Confidence 9999888777665432111 1 01100 1122223333333444433333333333333 2334432
Q ss_pred CCCh-hHHHHHHHHHHHHHHHHHHhh--c----ccHHHHHHHHhHHHHHHHHHHhhHHHHHHHhccccchhhHhhhHHHH
Q 013919 340 ISNN-YWCFILLRTALVFSSVCAAFL--L----PFFSLVMALIGSLLSILVAIIMPSLCFIKILGRKATRTQIVSSTAIA 412 (434)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~~~la~~--~----p~~~~~~~l~G~~~~~~~~~ilP~l~~l~~~~~~~~~~~~~~~~~~~ 412 (434)
.+++ .....+...+ ++.++... . ..++.+.++.+ .+..+.|.++.+.+++.|+++. +.+......+.
T Consensus 318 ~~~~~P~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~y~~~~~~~~~~r~~~~-~~r~~~~~~~~ 391 (445)
T 3l1l_A 318 NKAGTPVAGLIIVGI---LMTIFQLSSISPNATKEFGLVSSVSV--IFTLVPYLYTCAALLLLGHGHF-GKARPAYLAVT 391 (445)
T ss_dssp CTTCCCHHHHHHHHH---HHHHHHHSTTSHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHSSSS-GGGCTTTHHHH
T ss_pred CCCCCCHHHHHHHHH---HHHHHHHHHHcccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCc-ccccchhHHHH
Confidence 1111 1111222111 12222222 2 23666666644 3567899999999999876654 22212344444
Q ss_pred HHHHHHHHHHH
Q 013919 413 VLGVICAILGT 423 (434)
Q Consensus 413 ~~g~~~~v~g~ 423 (434)
.+|.+.++...
T Consensus 392 ~~~~~~~~~~~ 402 (445)
T 3l1l_A 392 TIAFLYCIWAV 402 (445)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45554444433
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.80 E-value=5.1e-17 Score=160.64 Aligned_cols=343 Identities=14% Similarity=0.087 Sum_probs=210.6
Q ss_pred CCCCCchHHHHHHHHHhhhccccchhHHH-HHhhcHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhcccc
Q 013919 42 IAHGCSFTQTIFNGINVMAGVGLLSTPYT-VKEAGWASLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKY 120 (434)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gil~lP~a-~~~~G~~g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~~ 120 (434)
.+|+.|.++..+..+++++|+|++..|.. .+..|..+++.+++.+++.......+.|...+.|+.....+++++.+||+
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~ 83 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN 83 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSS
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcc
Confidence 35679999999999999999999998855 45566558888889999999999999999999999888999999999996
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhhHHHH
Q 013919 121 --GRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGV 198 (434)
Q Consensus 121 --~~~~~~~~~~~~~~g~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~ 198 (434)
+++ ..+...+........+....++++...++....+ .......+...+++-....++.+...+++....
T Consensus 84 ~~~g~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~ 155 (444)
T 3gia_A 84 IITGA-LSILLWMSYVISIALFAKGFAGYFLPLINAPINT-------FNIAITEIGIVAFFTALNFFGSKAVGRAEFFIV 155 (444)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH-------HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch-------HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 333 3456666666677778888888888877542100 011112222233333444557777777776655
Q ss_pred HHHHHHHHhhhhcccc--cccccCCCCccccccchhhHHHHHHHhccCccchhhHHhhccchh-hhHHHHHHHHHHHHHH
Q 013919 199 VATILIVLCVLFLGTI--EGIGFHPTGQVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKALITCFALCVLI 275 (434)
Q Consensus 199 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~s~~~~~~~ 275 (434)
...+...+..+..+.. +..+..+.....++.++..++....|+|.|++.+....+|+|||+ +.+|++..+..++.++
T Consensus 156 ~~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~ 235 (444)
T 3gia_A 156 LVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFV 235 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHHH
Confidence 4444333322222211 111122212223345678888999999999999999999999997 5999999999999999
Q ss_pred HHHHHhHHHHhhcCCchh----h-hh---hcCCCchhHHHHHHHHHHHHHhhhhcchhcchHHHH-----HhhcCCC---
Q 013919 276 YGGVAVMGFLMFGQGTLS----Q-IT---LNMPPHAFASKVAVWTTVINPFTKYALLMNPLARSI-----EELLPAG--- 339 (434)
Q Consensus 276 Y~~~g~~gy~~fg~~~~~----~-il---~~~~~~~~~~~v~~~~~~~~~~~s~pl~~~~~~~~~-----~~~~~~~--- 339 (434)
|++..+......+.+... + .. .... +++...+..+...+..+.+.--..+...|.+ ++.+|+.
T Consensus 236 y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~dg~lP~~f~~ 314 (444)
T 3gia_A 236 YVGVAISAIGNLPIDELIKASENALAVAAKPFL-GNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFER 314 (444)
T ss_dssp HHHHHHHHHTTSCHHHHHHTGGGHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCCSSCCT
T ss_pred HHHHHHHHHhCCCHHHHhcccchhHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHhC
Confidence 998887765555422110 0 00 0000 0111112222222333333332233322222 3455543
Q ss_pred -CCChhHHHHHHHHHHHHHHHHHHhhcccHHHHHHHHhHHHHHHHHHHhhHHHHHHHhccc
Q 013919 340 -ISNNYWCFILLRTALVFSSVCAAFLLPFFSLVMALIGSLLSILVAIIMPSLCFIKILGRK 399 (434)
Q Consensus 340 -~~~~~~~~~~~~~~~~~~~~~la~~~p~~~~~~~l~G~~~~~~~~~ilP~l~~l~~~~~~ 399 (434)
+++......+. ...++.+++.. .+++.+.++.+. +..+.|.++.+.+++.|+++
T Consensus 315 ~~~~~P~~a~~~---~~~~~~~~~~~-~~~~~l~~~~~~--~~~~~~~~~~~~~~~~r~~~ 369 (444)
T 3gia_A 315 KVWFKSTEGLYI---TSALGVLFALL-FNMEGVASITSA--VFMVIYLFVILSHYILIDEV 369 (444)
T ss_dssp TSCCSCTHHHHH---HHHHHHHHHHH-SCHHHHHHHHHH--HHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCCCcHHHHH---HHHHHHHHHHH-cCHHHHHHHHHH--HHHHHHHHHHHHHHHhhhcC
Confidence 11111211111 11222223332 467777777443 56788899998888876554
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.70 E-value=3.6e-14 Score=142.72 Aligned_cols=241 Identities=11% Similarity=0.078 Sum_probs=152.4
Q ss_pred ccCCCCCchHHHHHHHHHhhhccccchhHHHHHhhcHHHHHHHHHHHHHHH-HHHHHHHHhhh--hCCCCCCHHHHHHHh
Q 013919 40 LPIAHGCSFTQTIFNGINVMAGVGLLSTPYTVKEAGWASLVVLLLFAVVCC-YTASLMRYCFE--SKEGITTYPDIGEAA 116 (434)
Q Consensus 40 ~~~~~~~s~~~~~~~l~~~~iG~Gil~lP~a~~~~G~~g~~~l~~~~~~~~-~~~~~l~~~~~--~~~~~~~y~~l~~~~ 116 (434)
.+.+|+.|.++.+...++.++| +.++|. .+..|...++..++.+++.. ..+..+.|.+. +.| ......++++.
T Consensus 7 ~~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~~ 82 (511)
T 4djk_A 7 TGKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSNT 82 (511)
T ss_dssp -----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHHH
T ss_pred CccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHhh
Confidence 3456779999999999999996 667886 45666655555555555443 47888999999 999 99999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCc-hhHHHHHHHHHHhhhhccccCchhhHhhH
Q 013919 117 FGKYGRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDS-THLFGILTALIVLPTIWLRDLRVISYLSA 195 (434)
Q Consensus 117 ~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~pl~~~~~~~~l~~~s~ 195 (434)
+||+.+++..+...+.......++....++.+...+.. ++..... ......+..++++-+...++.+...+++.
T Consensus 83 ~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~ 157 (511)
T 4djk_A 83 LGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW-----PALNEDPITKTIAALIILWALALTQFGGTKYTARIAK 157 (511)
T ss_dssp HCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTC-----GGGTSCSSHHHHHHHHHHHHHHHHHHTCSSSHHHHTH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cccccCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 99999999998888887766666766667766554311 0110001 12222223333333445567777777776
Q ss_pred HHHHHH-HHHHHhhhhcc---cccccc----cCCCC--ccccccchhhHHHHHHHhccCccchhhHHhhccchh-hhHHH
Q 013919 196 TGVVAT-ILIVLCVLFLG---TIEGIG----FHPTG--QVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKA 264 (434)
Q Consensus 196 ~~~~~~-~~~~~~~~~~~---~~~~~~----~~~~~--~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~ 264 (434)
...... +...+.++..+ ...+.+ .+... +..+..+...++...+|+|.|.+.+....+|+|||+ +.+|+
T Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~a 237 (511)
T 4djk_A 158 VGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLA 237 (511)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHH
Confidence 653321 11111111111 111110 11111 111112445678889999999999999999999997 69999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhcC
Q 013919 265 LITCFALCVLIYGGVAVMGFLMFGQ 289 (434)
Q Consensus 265 ~~~s~~~~~~~Y~~~g~~gy~~fg~ 289 (434)
+..++.++.++|++..+......++
T Consensus 238 i~~~~~~~~~~y~~~~~~~~~~~~~ 262 (511)
T 4djk_A 238 MLLLMVAAICLSSVGGLSIAMVIPG 262 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHeecCH
Confidence 9999999999999998877766654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=99.00 E-value=2.4e-07 Score=92.13 Aligned_cols=329 Identities=10% Similarity=0.044 Sum_probs=177.6
Q ss_pred CCCCchHHHHHHHHHhhhccccchhHHHHHh-hcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhcccc
Q 013919 43 AHGCSFTQTIFNGINVMAGVGLLSTPYTVKE-AGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKY 120 (434)
Q Consensus 43 ~~~~s~~~~~~~l~~~~iG~Gil~lP~a~~~-~G~~-g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~~ 120 (434)
+|+.++++-+..-.+..++.+.+.+...+.. .++. +++.+++..++.............+ .+ .++.++.|..||++
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~-~G-l~~~v~~R~~FG~~ 101 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIR-WG-INFTVAARMPFGIR 101 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHH-HC-CCHHHHTTTTSCTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhh-cC-CChhhhhHhhcchh
Confidence 3446788888888888888877777765544 3345 6666665555555455555555443 33 45999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhhHHHHHH
Q 013919 121 GRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVVA 200 (434)
Q Consensus 121 ~~~~~~~~~~~~~~g~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~~~ 200 (434)
+..+..+...+.+.|-..+.....++.+...+.... + ........++..++.+++.+. ..+.+.++.......
T Consensus 102 Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g-----~~~~~v~~~i~~~l~~~~~~~-G~~~i~~~~~~~~p~ 174 (501)
T 2jln_A 102 GSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-G-----FTNLPLWIVIFGAIQVVTTFY-GITFIRWMNVFASPV 174 (501)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-----CCCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-----cchHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 999999999888888888888888888777653110 0 011233444455566665543 667777766665544
Q ss_pred HHHHHHhhhhccc-cccc---ccCCCCccccccchhhHHHH-HHHhccCccchhhHHhhccchhh------------hHH
Q 013919 201 TILIVLCVLFLGT-IEGI---GFHPTGQVVKWSGMPFAIGI-YGFCYSGHSVFPNIYQSMADKTK------------FTK 263 (434)
Q Consensus 201 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~-~~faf~~~~~i~~i~~~m~~p~~------------~~~ 263 (434)
.+...+.+.+... ..+. +....++......+..++.. ..+.-....+.++..+++|++++ ...
T Consensus 175 ~~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~~~ 254 (501)
T 2jln_A 175 LLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYAT 254 (501)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchHHH
Confidence 3333322222111 1111 01111111222344444433 22222344678899999998877 344
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHhhcCCchhhhhhc-CCCchhHHHHHH-HHHHHHHhhhhcc-hhcchHHHHHhhcCCCC
Q 013919 264 ALITCFALCVLIYGGVAVMGFLMFGQGTLSQITLN-MPPHAFASKVAV-WTTVINPFTKYAL-LMNPLARSIEELLPAGI 340 (434)
Q Consensus 264 ~~~~s~~~~~~~Y~~~g~~gy~~fg~~~~~~il~~-~~~~~~~~~v~~-~~~~~~~~~s~pl-~~~~~~~~~~~~~~~~~ 340 (434)
....+..+...+..++|...-...+......++.. +++......+.. +...+..+.+.-. ..++....+....|+.-
T Consensus 255 g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~l~~~~~~~i 334 (501)
T 2jln_A 255 AQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVF 334 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHHHHHHSTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCcccc
Confidence 44455566665666666544333343333334333 222112123333 4444555555553 67788777878776431
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhhc--ccHHHHHHHHhHHHHHHHHH
Q 013919 341 SNNYWCFILLRTALVFSSVCAAFLL--PFFSLVMALIGSLLSILVAI 385 (434)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~la~~~--p~~~~~~~l~G~~~~~~~~~ 385 (434)
+++... .+..++.++++... ..+.+++++.|.........
T Consensus 335 --~~~~~~---~i~~vi~~~i~~~~~~~~f~~FL~~lg~~l~P~~gI 376 (501)
T 2jln_A 335 --TFKTGV---IVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGI 376 (501)
T ss_dssp --CHHHHH---HHHHHHHHHTCGGGTHHHHHHHHHHHHHTTHHHHHH
T ss_pred --chhHHH---HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 122111 11222233333322 24566666666664444433
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.62 E-value=5.3e-05 Score=75.85 Aligned_cols=150 Identities=14% Similarity=0.119 Sum_probs=85.4
Q ss_pred ccCCCCCchHHHHHHHHHhhhccc-cchhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhc
Q 013919 40 LPIAHGCSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAF 117 (434)
Q Consensus 40 ~~~~~~~s~~~~~~~l~~~~iG~G-il~lP~a~~~~G~~-g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~ 117 (434)
.--.|+.+++...+.+..+.+++. .+++|....+.|+. ....+. .++.....+..+....+ ..+..|.+|+.++-|
T Consensus 16 ~laGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~-~~~~~~i~~~~~~p~~~-~~~~~T~~e~l~~Rf 93 (530)
T 3dh4_A 16 XXAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFI-EKGIYTIPEFVEKRF 93 (530)
T ss_dssp HCCCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHTHHHHH-HTTCCSHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHHHHHH-HcCCccHHHHHHHHc
Confidence 334677899999999998888887 67899888888876 322221 11111222333334434 357799999999999
Q ss_pred ccchhhHHHHHHHH-HHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhhHH
Q 013919 118 GKYGRLLISVLLYT-ELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSAT 196 (434)
Q Consensus 118 G~~~~~~~~~~~~~-~~~g~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~ 196 (434)
|++.+.+..+...+ +.+....+.+...+..++..++ . +.....++..++..-......++...+...+
T Consensus 94 g~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G-i----------~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~i 162 (530)
T 3dh4_A 94 NKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG-I----------PLMYSILGLALFALVYSIYGGLSAVVWTDVI 162 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C----------CHHHHHHHHHHHHHHTTC------CCSHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C----------CHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 99888777655433 2222233333444555555543 1 1223334455555555666677777776666
Q ss_pred HHHHHH
Q 013919 197 GVVATI 202 (434)
Q Consensus 197 ~~~~~~ 202 (434)
-.+..+
T Consensus 163 Q~~im~ 168 (530)
T 3dh4_A 163 QVFFLV 168 (530)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=98.26 E-value=0.0015 Score=66.20 Aligned_cols=146 Identities=14% Similarity=0.117 Sum_probs=80.2
Q ss_pred CCCCCchHHHHHHHHHhhhccc-cchhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhccc
Q 013919 42 IAHGCSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGK 119 (434)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~G-il~lP~a~~~~G~~-g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~ 119 (434)
-.|+.+++.....+..+.+++. .++.|....+.|+. ....+. .++.....+..+....+ ..+..|.+|+.++-||+
T Consensus 47 aGR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~-~~~~~~~~~~~~~p~~~-r~~~~T~~e~l~~Rfg~ 124 (593)
T 2xq2_A 47 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFI-EKGIYTIPEFVEKRFNK 124 (593)
T ss_dssp ----CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHH-HHHHHHHHHHTHHHHHH-HTTCCSHHHHHHHHTCH
T ss_pred CCCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHH-HHHHHHHHHHHHHHHHH-hCCCCCcHHHHHHHccC
Confidence 3567889999999988888777 56889887788865 322221 11111222333333334 35779999999999999
Q ss_pred chhhHHHHHHHH-HHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhhHHHH
Q 013919 120 YGRLLISVLLYT-ELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGV 198 (434)
Q Consensus 120 ~~~~~~~~~~~~-~~~g~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~ 198 (434)
+.+.+..+...+ +.+......+...+..++.+++ . +.....++..++..-......++...+...+-.
T Consensus 125 ~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G-i----------~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~ 193 (593)
T 2xq2_A 125 KLKTILAVFWISLYIFVNLTSVLYLGGLALETILG-I----------PLMYSILGLALFALVYSIYGGLSAVVWTDVIQV 193 (593)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-C----------CHHHHHHHHHHHHHHHHHTTC---CCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-c----------cHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 888776654332 2323333334445556666553 1 122233344444455555667777666665554
Q ss_pred HH
Q 013919 199 VA 200 (434)
Q Consensus 199 ~~ 200 (434)
+.
T Consensus 194 ii 195 (593)
T 2xq2_A 194 FF 195 (593)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=97.67 E-value=0.053 Score=53.47 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=105.8
Q ss_pred CchHHHHHHHHHhhhccc-cchhHHHHHhhcHH-----HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhccc
Q 013919 46 CSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-----SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGK 119 (434)
Q Consensus 46 ~s~~~~~~~l~~~~iG~G-il~lP~a~~~~G~~-----g~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~y~~l~~~~~G~ 119 (434)
.|..+-+...+++.+|-| +.=.||-..+.|.. =++.+++.|+-..+.=..+.+..++..+ .+-.+.-++...+
T Consensus 9 ~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~r-~~~i~a~~~l~~~ 87 (519)
T 2a65_A 9 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGH-GTTPAIFYLLWRN 87 (519)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTTC-CSHHHHHHHHSCS
T ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhccC-CCHHHHHHHhcCC
Confidence 667899999999999999 88899988777643 2233344444444444555553221222 2333333333322
Q ss_pred c-hhhHHHHHHHHHHHHHHHHHHHHhhhhh-------hhhcCC-CCCCC--C------------------C-ccc---Cc
Q 013919 120 Y-GRLLISVLLYTELYSYCVEFIILEGDNL-------TSLFPG-ASLDW--P------------------G-FQL---DS 166 (434)
Q Consensus 120 ~-~~~~~~~~~~~~~~g~~~~y~i~~~~~~-------~~~~~~-~~~~~--~------------------~-~~~---~~ 166 (434)
+ ++ .+.....+..+..+.-|.++.+-.+ ..-++. +..+. . + .+. ..
T Consensus 88 ~~~~-giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g~~~~ 166 (519)
T 2a65_A 88 RFAK-ILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILKPSL 166 (519)
T ss_dssp HHHH-HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBCCCCH
T ss_pred cCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCcccccCccH
Confidence 1 21 1222222223333333333333222 111110 00000 0 0 000 00
Q ss_pred hhHHHHHHHHHHhhhhccccC-chhhHhhHHHHHHHHHHHHhhhhccc-ccccc--------cCCCCcccc---ccchhh
Q 013919 167 THLFGILTALIVLPTIWLRDL-RVISYLSATGVVATILIVLCVLFLGT-IEGIG--------FHPTGQVVK---WSGMPF 233 (434)
Q Consensus 167 ~~~~~~~~~~i~~pl~~~~~~-~~l~~~s~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~---~~~~~~ 233 (434)
+.....+...++.-++..|.+ +...+++.+-+.....+.+++..... .+++. .--.+++.+ .+-+..
T Consensus 167 ~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~vw~~ 246 (519)
T 2a65_A 167 FAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIA 246 (519)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHHHHHH
Confidence 111112223333445667888 66777777665544444443333332 22210 001122222 234678
Q ss_pred HHHHHHHhcc-CccchhhHHhhccchhhhHHHHHH
Q 013919 234 AIGIYGFCYS-GHSVFPNIYQSMADKTKFTKALIT 267 (434)
Q Consensus 234 ~~~~~~faf~-~~~~i~~i~~~m~~p~~~~~~~~~ 267 (434)
+.+..+|+.+ |...+...-+.+|+.++..|....
T Consensus 247 A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~ 281 (519)
T 2a65_A 247 AVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLT 281 (519)
T ss_dssp HHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHH
T ss_pred HHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHH
Confidence 9999999999 566666666677766666654333
No 8
>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}
Probab=63.97 E-value=73 Score=27.69 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=55.8
Q ss_pred chhHHHHHHHHHHHHHhhhhcchhcchHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHhhc----------------
Q 013919 302 HAFASKVAVWTTVINPFTKYALLMNPLARSIEELLPAGISNNYWCFILLRTALVFSSVCAAFLL---------------- 365 (434)
Q Consensus 302 ~~~~~~v~~~~~~~~~~~s~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---------------- 365 (434)
.+....-.++......+.+.|...+=....+..-+.+++++...................+..+
T Consensus 58 ~e~f~~~lkvs~~~g~~~a~P~ilyQiw~Fi~PgLy~~Err~~~~~~~~s~~LF~~G~~f~Yf~v~P~~~~Fl~~~~~~~ 137 (249)
T 4b4a_A 58 TEPLFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLGFTQ 137 (249)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCTTTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTTCSSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 3444445567777888899999887777766665555544333333333333333333333321
Q ss_pred ----c--cHHHHHHHHhHHH-HHHHHHHhhHHHHHHHhc
Q 013919 366 ----P--FFSLVMALIGSLL-SILVAIIMPSLCFIKILG 397 (434)
Q Consensus 366 ----p--~~~~~~~l~G~~~-~~~~~~ilP~l~~l~~~~ 397 (434)
| ++++-++++-.+. ..-++|-+|.++.+..+-
T Consensus 138 i~~~~~~~i~~Yl~fv~~l~l~fGl~FelPvi~~~L~~~ 176 (249)
T 4b4a_A 138 LLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKA 176 (249)
T ss_dssp SSSSTTEEHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHT
T ss_pred hHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 5566666554443 334677899999887753
No 9
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=22.37 E-value=4.6e+02 Score=24.16 Aligned_cols=47 Identities=13% Similarity=0.180 Sum_probs=37.9
Q ss_pred CCCHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 013919 106 ITTYPDIGEAAFGKYGRLLISVLLYTELYSYCVEFIILEGDNLTSLF 152 (434)
Q Consensus 106 ~~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~~~~~~ 152 (434)
...+.+..++.+|+++..++.+...+..++...++....++.+..+-
T Consensus 259 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a 305 (445)
T 3l1l_A 259 ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305 (445)
T ss_dssp TCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999888888888888888877777665543
No 10
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=16.84 E-value=7.1e+02 Score=24.05 Aligned_cols=24 Identities=17% Similarity=-0.000 Sum_probs=19.6
Q ss_pred CCCchHHHHHHHHHhhhccccchh
Q 013919 44 HGCSFTQTIFNGINVMAGVGLLST 67 (434)
Q Consensus 44 ~~~s~~~~~~~l~~~~iG~Gil~l 67 (434)
++-|.++-+..+.++-+|.|++.-
T Consensus 89 Pefs~~sW~aMlF~aGmGiGl~fw 112 (509)
T 2wsw_A 89 PEFSTASWIFMMFASCTSAAVLFW 112 (509)
T ss_dssp CSSCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCccchHHHHHHHHhhhhHHhhh
Confidence 346778889999999999998753
Done!