Your job contains 1 sequence.
>013922
MELCITNSTRILNLNSLNRTGLPLSVSLKNSTVEFMNQNYFNSQKLSSFSRQIHLYLHQP
QFHRSPVRIFASSSSSVALGPEKDRLPADIEVTESPEPNSTVRLSVEVPEAVCKDSYKRV
LNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAMTSVTGRALRDS
VRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDTAAQQAAE
EELRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTED
GDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDD
SLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ
GRQLYGAQLLQMQV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013922
(434 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161640 - symbol:AT5G55220 "AT5G55220" species... 1309 1.4e-133 1
TIGR_CMR|CHY_0324 - symbol:CHY_0324 "trigger factor" spec... 225 4.7e-16 1
TIGR_CMR|DET_0709 - symbol:DET_0709 "trigger factor" spec... 169 1.6e-15 2
TIGR_CMR|SO_1793 - symbol:SO_1793 "trigger factor" specie... 140 4.6e-12 2
UNIPROTKB|Q9KQS5 - symbol:tig "Trigger factor" species:24... 148 1.3e-11 3
TIGR_CMR|VC_1923 - symbol:VC_1923 "trigger factor" specie... 148 1.3e-11 3
UNIPROTKB|O53189 - symbol:tig "Trigger factor" species:17... 186 1.6e-11 1
TIGR_CMR|BA_4705 - symbol:BA_4705 "trigger factor" specie... 181 4.7e-11 1
TIGR_CMR|SPO_2288 - symbol:SPO_2288 "trigger factor" spec... 149 9.0e-11 2
TIGR_CMR|GSU_1793 - symbol:GSU_1793 "trigger factor" spec... 169 1.1e-09 1
TIGR_CMR|CJE_0186 - symbol:CJE_0186 "trigger factor" spec... 164 4.1e-09 1
TIGR_CMR|CBU_0737 - symbol:CBU_0737 "trigger factor" spec... 151 1.2e-07 1
UNIPROTKB|P0A850 - symbol:tig "trigger factor; a molecula... 146 2.8e-07 2
TIGR_CMR|CPS_3786 - symbol:CPS_3786 "trigger factor" spec... 143 8.7e-07 1
UNIPROTKB|Q9WZF8 - symbol:tig "Trigger factor" species:24... 104 1.3e-06 2
TIGR_CMR|APH_0971 - symbol:APH_0971 "putative trigger fac... 120 0.00031 1
>TAIR|locus:2161640 [details] [associations]
symbol:AT5G55220 "AT5G55220" species:3702 "Arabidopsis
thaliana" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=ISS] [GO:0006457 "protein folding"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0016556 "mRNA modification" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
InterPro:IPR001179 InterPro:IPR008880 InterPro:IPR008881
Pfam:PF00254 Pfam:PF05697 Pfam:PF05698 PROSITE:PS50059
EMBL:CP002688 GO:GO:0009570 GO:GO:0006457 GO:GO:0015031
GO:GO:0009941 GO:GO:0003755 GO:GO:0000413 EMBL:AB010071
SUPFAM:SSF109998 Gene3D:1.10.3120.10 Gene3D:3.30.70.1050
SUPFAM:SSF102735 EMBL:AY074845 EMBL:BT002296 EMBL:AK222129
IPI:IPI00523656 RefSeq:NP_200333.2 UniGene:At.29456 HSSP:P22257
ProteinModelPortal:Q8S9L5 IntAct:Q8S9L5 STRING:Q8S9L5 PRIDE:Q8S9L5
EnsemblPlants:AT5G55220.1 GeneID:835615 KEGG:ath:AT5G55220
TAIR:At5g55220 HOGENOM:HOG000241803 InParanoid:Q8S9L5 OMA:RCKEVEK
PhylomeDB:Q8S9L5 ProtClustDB:CLSN2690241 Genevestigator:Q8S9L5
Uniprot:Q8S9L5
Length = 547
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 258/442 (58%), Positives = 346/442 (78%)
Query: 1 MELCITNST---RILN--LNSLNRTGLPLSVSLKNSTVEF---MNQNYFNSQKLSSFSRQ 52
MELC+ ++T + +N L S+ R + + +S ++F + + +S SR+
Sbjct: 1 MELCVISTTTTVKAINPFLPSITRR-VSSRLFQSDSVLQFGGRLKKPISRPLDMSCVSRK 59
Query: 53 IHLYLHQPQFHRSPVRIFASSSSSVALGPEKDRLPADIEVTESPEPNSTVRLSVEVPEAV 112
I + H R+FA++S +V ++D+LPAD++VTE+ + NS+V+LSVEVPE V
Sbjct: 60 IGFF-GDFMSHGGNFRLFAAASPAVETSVKEDKLPADLKVTETVQANSSVKLSVEVPEIV 118
Query: 113 CKDSYKRVLNELMKQVKIPGFRPG-KIPESVLVGFVGEQNVKKATVESILKRTLPHAMTS 171
C+D Y+RVL E MK K+PGFRP ++PE+++VGFVG Q V +ATVESILKRTLPHAM S
Sbjct: 119 CEDCYQRVLTEFMKLSKVPGFRPKTRVPENIIVGFVGRQYVLRATVESILKRTLPHAMES 178
Query: 172 VTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDN 231
VTGRAL+DS++IV+ F +MEK YS L +LSY+V+VDV PE+KWNP +GYKN+K+VVE+ +
Sbjct: 179 VTGRALKDSIQIVSSFPDMEKAYSKLKTLSYEVVVDVVPELKWNPEDGYKNMKVVVELGD 238
Query: 232 DTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAET 291
+ LR+++KSLG+LKIVT+RGLQVGD+A+VDISATTIDED S Q IPDAE+
Sbjct: 239 EIDAKKACERQLRQKYKSLGALKIVTERGLQVGDLAVVDISATTIDEDGSTGQAIPDAES 298
Query: 292 KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELF 351
KGFHFDTE+G+++LPGFLD+I GI+ GE+KSF L FPESW+QE LRG +AQFTV+C+ELF
Sbjct: 299 KGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVFPESWKQESLRGQRAQFTVDCKELF 358
Query: 352 YRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEID 411
YRDLP LDDSLA KLLPGCTT+++V+ETL ++C+E+EQ AK+QATDNAIL+Q+ KMVE++
Sbjct: 359 YRDLPTLDDSLADKLLPGCTTLKEVEETLAKRCQEMEQEAKEQATDNAILEQIRKMVEVE 418
Query: 412 IPQSLFEEQGRQLYGAQLLQMQ 433
IPQSLFEEQGRQ YGA+LL++Q
Sbjct: 419 IPQSLFEEQGRQFYGARLLEIQ 440
>TIGR_CMR|CHY_0324 [details] [associations]
symbol:CHY_0324 "trigger factor" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003755
"peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
[GO:0006457 "protein folding" evidence=ISS] HAMAP:MF_00303
InterPro:IPR001179 InterPro:IPR005215 InterPro:IPR008880
InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697 Pfam:PF05698
PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737 GO:GO:0006457
GO:GO:0051301 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0015031
GO:GO:0007049 GO:GO:0003755 GO:GO:0000413 SUPFAM:SSF109998
eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10 Gene3D:3.30.70.1050
SUPFAM:SSF102735 TIGRFAMs:TIGR00115 HOGENOM:HOG000218240
OMA:FPADYHG ProtClustDB:PRK01490 RefSeq:YP_359187.1 HSSP:Q9RT21
ProteinModelPortal:Q3AF97 STRING:Q3AF97 GeneID:3727959
KEGG:chy:CHY_0324 PATRIC:21273819
BioCyc:CHYD246194:GJCN-325-MONOMER Uniprot:Q3AF97
Length = 427
Score = 225 (84.3 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 70/274 (25%), Positives = 127/274 (46%)
Query: 149 EQNV-KKATVESILKRTLPHAMTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVD 207
E++V K+ +E L LP + A + V K +Y L Y +VD
Sbjct: 55 ERHVGKEYILEEALDELLPESYVKAVNEA---GIEPVDKPEVSLVSYGVNEPLVYKAVVD 111
Query: 208 VAPEVKWNPGNGYKNLKIVVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIA 267
V PEV+ G + K+ VE+ ++ L+ R+ L + V D + GDI
Sbjct: 112 VKPEVELGQYTGLEVTKMPVEVTDEEVEKELEY--LQNRYAKLIT---VEDGEAKFGDIV 166
Query: 268 IVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLA 326
++D + + N + + + + G KV +PGF + I G++ GETK +
Sbjct: 167 VIDFAG------KMNGEPLEGGSADNYRLEL--GSKVFIPGFEEQIVGMKPGETKEINVT 218
Query: 327 FPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE 386
FPE +++E L G A FTV +E+ ++L LDD A K + +T+ ++KE L +K +
Sbjct: 219 FPEDYQKEDLAGKPAVFTVTLKEIKRKELAPLDDEFA-KDVSEFSTLAELKEDLKKKIAQ 277
Query: 387 VEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 420
++ + + ++++ ++IP S+ +
Sbjct: 278 TKENISREKMEAEVVEKAVDNANVEIPASMVNHE 311
>TIGR_CMR|DET_0709 [details] [associations]
symbol:DET_0709 "trigger factor" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003755 "peptidyl-prolyl
cis-trans isomerase activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] HAMAP:MF_00303 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF05697 Pfam:PF05698
PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737 GO:GO:0006457
GO:GO:0051301 GO:GO:0015031 GO:GO:0007049 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0003755 GO:GO:0000413
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
RefSeq:YP_181450.1 ProteinModelPortal:Q3Z8J9 STRING:Q3Z8J9
GeneID:3229950 KEGG:det:DET0709 PATRIC:21608481
HOGENOM:HOG000010184 ProtClustDB:CLSK837322
BioCyc:DETH243164:GJNF-710-MONOMER Uniprot:Q3Z8J9
Length = 448
Score = 169 (64.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 44/176 (25%), Positives = 89/176 (50%)
Query: 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQR 317
+R +++GD+ ++ + +T E N +++ + E+ PGF + + +
Sbjct: 154 ERPVKMGDMLLMKVESTLNGEPYLNREDMQ-------YSVREEAIYPAPGFGEHLVDMVV 206
Query: 318 GETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVK 377
GE K F + FPE + L G A F V +E+ LP+L+D+ A +L P T+ +++
Sbjct: 207 GEPKEFSIVFPEDHARAELAGKTAAFKVTIQEIREEKLPELNDAFAHELNPEFNTLAELR 266
Query: 378 ETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQ 433
+ + + +E + ++ I++ L KM +ID P+ + E + Q+ QL ++Q
Sbjct: 267 QRIRENMQERQDDQAQAKFEDQIVEALIKMSKIDYPEVMVETELDQIIEQQLQRLQ 322
Score = 98 (39.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGE 149
++VT+ ++VE+ A + + L+K+V+IPGFR GK P V ++G
Sbjct: 1 MKVTDKKIEGCQASITVEMDPAEVEAGLSKTYRRLVKKVEIPGFRKGKTPRDVFEKYLGR 60
Query: 150 QNVKKATVESILKRTLPHAM 169
+ + V+ I+ A+
Sbjct: 61 EKMLDEVVDDIVPEACQQAI 80
>TIGR_CMR|SO_1793 [details] [associations]
symbol:SO_1793 "trigger factor" species:211586 "Shewanella
oneidensis MR-1" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=ISS] [GO:0006457 "protein folding" evidence=ISS]
HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 GO:GO:0015031 GO:GO:0007049
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003755 GO:GO:0000413
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
ProtClustDB:PRK01490 HOGENOM:HOG000218239 RefSeq:NP_717402.1
ProteinModelPortal:Q8EG20 SMR:Q8EG20 PRIDE:Q8EG20 GeneID:1169566
KEGG:son:SO_1793 PATRIC:23523209 Uniprot:Q8EG20
Length = 434
Score = 140 (54.3 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 262 QVGDIAIVDISATTIDEDESN-VQNIPDAETKGFH---FDTEDGD-KVLPGFLDSISGIQ 316
Q A V+ A D+ + N V ++ E +G F+ + G +++PGF I G +
Sbjct: 146 QHATFAAVEREAVDGDKVKMNFVGSVDGVEFEGGKAEDFELQLGSGRMIPGFEAGILGHK 205
Query: 317 RGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTT--IE 374
GE + FPE + E+L+G A+F + E+ +LP+++D A L G T +E
Sbjct: 206 AGEEFVIDVTFPEEYHAENLKGKAAKFAITLTEVLAANLPEVNDEFAA--LFGITEGGLE 263
Query: 375 QVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFE-------EQGRQLYG 426
+K + + RE+EQ K + I L +I++P++L + +Q Q +G
Sbjct: 264 ALKTEIRKNMNRELEQALKANVKEQVIAGLLANN-DIELPKALIDGEVNVLRQQAMQRFG 322
Query: 427 AQLLQM 432
Q M
Sbjct: 323 GQTANM 328
Score = 96 (38.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 86 LPADIEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVL 143
+ +E T+ E T+ + E E + KDS +R K+ +IPGFRPGK+P +V+
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREA----KRARIPGFRPGKVPVTVI 54
>UNIPROTKB|Q9KQS5 [details] [associations]
symbol:tig "Trigger factor" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0000413 "protein peptidyl-prolyl
isomerization" evidence=ISS] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 GO:GO:0015031 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0007049 GO:GO:0003755
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
ProtClustDB:PRK01490 PIR:H82139 RefSeq:NP_231557.1 PDB:1T11
PDBsum:1T11 ProteinModelPortal:Q9KQS5 SMR:Q9KQS5 PRIDE:Q9KQS5
DNASU:2613552 GeneID:2613552 KEGG:vch:VC1923 PATRIC:20082890
EvolutionaryTrace:Q9KQS5 Uniprot:Q9KQS5
Length = 433
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 37/131 (28%), Positives = 70/131 (53%)
Query: 292 KGFHFDTEDG-DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECREL 350
K +F E G +++PGF D I G +G + FPE + E+L+G A+F ++ ++
Sbjct: 181 KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKV 240
Query: 351 FYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVE 409
R+LP+L+D + ++ +K + + RE++Q K + + AI + L K E
Sbjct: 241 EARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI-EGLVKENE 299
Query: 410 IDIPQSLFEEQ 420
I +P +L +++
Sbjct: 300 IQVPSALIDQE 310
Score = 81 (33.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 40/187 (21%), Positives = 74/187 (39%)
Query: 103 RLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILK 162
RL++ VP A +D+ L + K + GFR GK+P ++ G+ V++ + +++
Sbjct: 14 RLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKA-VRQDVLGEVMQ 72
Query: 163 RTLPHAMTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKN 222
R H + ++ + + F+ +E L + +V PEV+ G +N
Sbjct: 73 R---HFIEAIVKEKINPAG--APTFAPVEIGEGK--DLVFTATFEVYPEVELK---GLEN 122
Query: 223 LKIVVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDI--SATTIDEDE 280
I VE L K + K V D + G +D S ++ +
Sbjct: 123 --IAVEKPAAEVTDADVAEMLETLRKQQATWKEV-DEAAENGKRVSIDFVGSIDGVEFEG 179
Query: 281 SNVQNIP 287
+N P
Sbjct: 180 GKAENFP 186
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 412 IPQSLFEEQGRQLYGAQLLQMQV 434
+P+ LFEEQ ++ LL +V
Sbjct: 332 LPRELFEEQAKRRVVVGLLLGEV 354
>TIGR_CMR|VC_1923 [details] [associations]
symbol:VC_1923 "trigger factor" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 GO:GO:0015031 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0007049 GO:GO:0003755
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
ProtClustDB:PRK01490 PIR:H82139 RefSeq:NP_231557.1 PDB:1T11
PDBsum:1T11 ProteinModelPortal:Q9KQS5 SMR:Q9KQS5 PRIDE:Q9KQS5
DNASU:2613552 GeneID:2613552 KEGG:vch:VC1923 PATRIC:20082890
EvolutionaryTrace:Q9KQS5 Uniprot:Q9KQS5
Length = 433
Score = 148 (57.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 37/131 (28%), Positives = 70/131 (53%)
Query: 292 KGFHFDTEDG-DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECREL 350
K +F E G +++PGF D I G +G + FPE + E+L+G A+F ++ ++
Sbjct: 181 KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKV 240
Query: 351 FYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVE 409
R+LP+L+D + ++ +K + + RE++Q K + + AI + L K E
Sbjct: 241 EARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI-EGLVKENE 299
Query: 410 IDIPQSLFEEQ 420
I +P +L +++
Sbjct: 300 IQVPSALIDQE 310
Score = 81 (33.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 40/187 (21%), Positives = 74/187 (39%)
Query: 103 RLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILK 162
RL++ VP A +D+ L + K + GFR GK+P ++ G+ V++ + +++
Sbjct: 14 RLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKA-VRQDVLGEVMQ 72
Query: 163 RTLPHAMTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKN 222
R H + ++ + + F+ +E L + +V PEV+ G +N
Sbjct: 73 R---HFIEAIVKEKINPAG--APTFAPVEIGEGK--DLVFTATFEVYPEVELK---GLEN 122
Query: 223 LKIVVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDI--SATTIDEDE 280
I VE L K + K V D + G +D S ++ +
Sbjct: 123 --IAVEKPAAEVTDADVAEMLETLRKQQATWKEV-DEAAENGKRVSIDFVGSIDGVEFEG 179
Query: 281 SNVQNIP 287
+N P
Sbjct: 180 GKAENFP 186
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 412 IPQSLFEEQGRQLYGAQLLQMQV 434
+P+ LFEEQ ++ LL +V
Sbjct: 332 LPRELFEEQAKRRVVVGLLLGEV 354
>UNIPROTKB|O53189 [details] [associations]
symbol:tig "Trigger factor" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009267 "cellular response to starvation" evidence=IEP]
[GO:0046677 "response to antibiotic" evidence=IEP] HAMAP:MF_00303
InterPro:IPR001179 InterPro:IPR005215 InterPro:IPR008880
InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697 Pfam:PF05698
PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005829 GO:GO:0005886
GO:GO:0005618 GO:GO:0006457 GO:GO:0051301 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0015031
GO:GO:0046677 GO:GO:0007049 EMBL:BX842579 GO:GO:0009267
GO:GO:0003755 GO:GO:0000413 SUPFAM:SSF109998 eggNOG:COG0544
KO:K03545 Gene3D:1.10.3120.10 Gene3D:3.30.70.1050 SUPFAM:SSF102735
TIGRFAMs:TIGR00115 HOGENOM:HOG000218240 OMA:FPADYHG
ProtClustDB:PRK01490 PIR:E70865 RefSeq:NP_216978.1
RefSeq:NP_337023.1 RefSeq:YP_006515899.1 ProteinModelPortal:O53189
SMR:O53189 PRIDE:O53189 EnsemblBacteria:EBMYCT00000000805
EnsemblBacteria:EBMYCT00000069327 GeneID:13319172 GeneID:888615
GeneID:925788 KEGG:mtc:MT2537 KEGG:mtu:Rv2462c KEGG:mtv:RVBD_2462c
PATRIC:18127332 TubercuList:Rv2462c Uniprot:O53189
Length = 466
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 53/196 (27%), Positives = 96/196 (48%)
Query: 225 IVVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQ 284
+ V +D L+ G+L V DR + VGD+ +D+SAT ED
Sbjct: 124 LTVSVDPIEIGEDDVDAELQSLRTRFGTLTAV-DRPVAVGDVVSIDLSATVDGED----- 177
Query: 285 NIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFT 344
IP+A +G + G +++ G D++ G+ E++ F EH G +AQ T
Sbjct: 178 -IPNAAAEGLSHEVGSG-RLIAGLDDAVVGLSADESRVFTAKLAAG---EHA-GQEAQVT 231
Query: 345 VECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQL 404
V R + R+LP+ DD A +L +I++++ +L + R+ ++ + + NA +D L
Sbjct: 232 VTVRSVKERELPEPDDEFA-QLASEFDSIDELRASLSDQVRQAKRAQQAEQIRNATIDAL 290
Query: 405 YKMVEIDIPQSLFEEQ 420
+ V++ +P+S + Q
Sbjct: 291 LEQVDVPLPESYVQAQ 306
Score = 181 (68.8 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 60/185 (32%), Positives = 93/185 (50%)
Query: 102 VRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESIL 161
VR++VEVP A + ++R EL KQV++PGFRPGK P +L +G ++A ++ I+
Sbjct: 13 VRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARIG----REAMLDQIV 68
Query: 162 KRTLPHAMTSVTGRALRDS-VRIVTK--FSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGN 218
LP S G+A+ +S V+ + + +K Y L + VD+ P++ P
Sbjct: 69 NDALP----SRYGQAVAESDVQPLGRPNIEVTKKEYGQ--DLQFTAEVDIRPKIS-PPDL 121
Query: 219 GYKNLKI-VVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTID 277
+ + +EI D LR R G+L V DR + VGD+ +D+SAT
Sbjct: 122 SALTVSVDPIEIGEDDVDAELQS--LRTR---FGTLTAV-DRPVAVGDVVSIDLSATVDG 175
Query: 278 EDESN 282
ED N
Sbjct: 176 EDIPN 180
>TIGR_CMR|BA_4705 [details] [associations]
symbol:BA_4705 "trigger factor" species:198094 "Bacillus
anthracis str. Ames" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0015031 GO:GO:0007049 GO:GO:0003755
GO:GO:0000413 SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545
Gene3D:1.10.3120.10 Gene3D:3.30.70.1050 SUPFAM:SSF102735
TIGRFAMs:TIGR00115 RefSeq:NP_846918.1 RefSeq:YP_021353.1
RefSeq:YP_030617.1 ProteinModelPortal:Q81LB8 IntAct:Q81LB8
DNASU:1083666 EnsemblBacteria:EBBACT00000009870
EnsemblBacteria:EBBACT00000017229 EnsemblBacteria:EBBACT00000024077
GeneID:1083666 GeneID:2816050 GeneID:2851843 KEGG:ban:BA_4705
KEGG:bar:GBAA_4705 KEGG:bat:BAS4370 HOGENOM:HOG000218240
OMA:FPADYHG ProtClustDB:PRK01490
BioCyc:BANT260799:GJAJ-4425-MONOMER
BioCyc:BANT261594:GJ7F-4573-MONOMER Uniprot:Q81LB8
Length = 425
Score = 181 (68.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 60/266 (22%), Positives = 114/266 (42%)
Query: 157 VESILKRTLPHAMTSVTGRALRDSVRIVTKFSEME-KNYSSLNSLSYDVLVDVAPEVKWN 215
+ES+ + L + G A+ ++ E++ + + +L + V V PEVK
Sbjct: 60 IESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEKFEKNANLIFTAKVTVKPEVKLG 119
Query: 216 PGNGYKNLKIVVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATT 275
YK L VE T L+ + L + + ++ GD A++D
Sbjct: 120 E---YKGL--AVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDF---- 170
Query: 276 IDEDESNVQNIPDAETKGFHFDTEDGDKV-LPGFLDSISGIQRGETKSFRLAFPESWRQE 334
E V KG ++ G +PGF + + G++ GE+K ++FPE +
Sbjct: 171 ----EGFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAA 226
Query: 335 HLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQ 394
L G A F V E+ ++LP+L+D A + T++++K L E ++ +
Sbjct: 227 ELAGKPATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEH 286
Query: 395 ATDNAILDQLYKMVEIDIPQSLFEEQ 420
+ +++ EIDIP+++ + +
Sbjct: 287 KVRDEVVELAAANAEIDIPEAMIDTE 312
>TIGR_CMR|SPO_2288 [details] [associations]
symbol:SPO_2288 "trigger factor" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0015031 GO:GO:0007049 GO:GO:0003755 GO:GO:0000413
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115
ProtClustDB:PRK01490 RefSeq:YP_167512.1 ProteinModelPortal:Q5LR43
GeneID:3194965 KEGG:sil:SPO2288 PATRIC:23377931
HOGENOM:HOG000218241 OMA:YIKEKAF Uniprot:Q5LR43
Length = 443
Score = 149 (57.5 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 305 LPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAG 364
+PGF + + G++ E K + FPE + EHL G +A FT +E+ ++DD LA
Sbjct: 199 IPGFEEQLVGVKAEEEKDVTVTFPEEYGAEHLAGKEAVFTCTIKEVKEPVAAEIDDELAK 258
Query: 365 KLLPGCTTIEQVKETLLQKCREVEQTAKDQAT-DNAILDQLYKMVEIDIPQSLFEEQGRQ 423
K G + +K + ++ E E +A +LD L V D+P SL + + +Q
Sbjct: 259 KF--GAEDLAALKSQIAERL-EAEYAGASRAVMKRGLLDALDAKVSFDLPPSLVDAEAKQ 315
Query: 424 L 424
+
Sbjct: 316 I 316
Score = 74 (31.1 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGE 149
++VTE+ ++ V A L E ++++ GFR GK+P ++L G+
Sbjct: 1 MQVTETLNEGLKRGYNIVVSAAELDAKVNEKLVEAQPEIEMKGFRKGKVPMALLKKQFGQ 60
Query: 150 QNVKKATVESILKRTLPHAMTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVA 209
+ + +A E+I H S AL+ V++ + + ++ ++SY+ L +
Sbjct: 61 RLLGEAMQETIDGAMNKHFEDSGDRPALQPEVKMTNE--DWKEGDDVEVAMSYEALPAI- 117
Query: 210 PEV 212
PEV
Sbjct: 118 PEV 120
Score = 41 (19.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGF 294
+ GL+ G +V + +E V+ P+ E KGF
Sbjct: 8 NEGLKRGYNIVVSAAELDAKVNEKLVEAQPEIEMKGF 44
>TIGR_CMR|GSU_1793 [details] [associations]
symbol:GSU_1793 "trigger factor" species:243231 "Geobacter
sulfurreducens PCA" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 GO:GO:0015031 GO:GO:0007049
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003755 GO:GO:0000413
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115
HOGENOM:HOG000218240 OMA:FPADYHG RefSeq:NP_952843.1
ProteinModelPortal:Q74C81 GeneID:2685787 KEGG:gsu:GSU1793
PATRIC:22026433 ProtClustDB:CLSK828562
BioCyc:GSUL243231:GH27-1827-MONOMER Uniprot:Q74C81
Length = 431
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 53/222 (23%), Positives = 103/222 (46%)
Query: 201 SYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDTXXXXXXXXXLRRRHKSLGSLKIVTDRG 260
+Y V+V PE+ NG L++ E T L+ +++ L+ + +
Sbjct: 104 TYSATVEVLPEIDVKDYNG---LEVAKE--TFTPDESIVEKRLQEMRENMSHLRSLEEGS 158
Query: 261 L-QVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGD-KVLPGFLDSISGIQRG 318
+ + G A++D + V +P + E G + +PGF + I G++ G
Sbjct: 159 VAEDGHFAVIDFTGY--------VDGVPFEGGSAESYQLELGSGRFIPGFEEQIVGMKTG 210
Query: 319 ETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKE 378
E+KS L FPE + + L G +A+F V E+ ++LP+L+D A ++ TI Q+++
Sbjct: 211 ESKSMSLNFPEDYWNKDLAGKEARFDVILSEIKVKELPELNDEFAAQM-GEFDTITQLRD 269
Query: 379 TLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 420
+ + + E + ++ L + EI++P +L + Q
Sbjct: 270 KIAELYEKQENDRIKADLQDRVVQALIEKNEIEVPSTLVDRQ 311
>TIGR_CMR|CJE_0186 [details] [associations]
symbol:CJE_0186 "trigger factor" species:195099
"Campylobacter jejuni RM1221" [GO:0003755 "peptidyl-prolyl
cis-trans isomerase activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179
InterPro:IPR005215 InterPro:IPR008880 InterPro:IPR008881
Pfam:PF00254 Pfam:PF05697 Pfam:PF05698 PIRSF:PIRSF003095
PROSITE:PS50059 GO:GO:0005737 GO:GO:0006457 GO:GO:0051301
GO:GO:0015031 GO:GO:0007049 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003755 GO:GO:0000413 SUPFAM:SSF109998 eggNOG:COG0544
KO:K03545 Gene3D:1.10.3120.10 Gene3D:3.30.70.1050 SUPFAM:SSF102735
TIGRFAMs:TIGR00115 HOGENOM:HOG000218240 OMA:FPADYHG
ProtClustDB:PRK01490 RefSeq:YP_178210.1 ProteinModelPortal:Q5HWX5
STRING:Q5HWX5 GeneID:3230949 KEGG:cjr:CJE0186 PATRIC:20042081
BioCyc:CJEJ195099:GJC0-191-MONOMER Uniprot:Q5HWX5
Length = 444
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 49/171 (28%), Positives = 81/171 (47%)
Query: 255 IVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDK-VLPGFLDSIS 313
I T R L+ GD A D D+ + K ++ E G K +PGF D +
Sbjct: 156 IKTKRALKEGDFAKFDFEGFV---DDKAFEG-----GKAENYVLEIGSKQFIPGFEDGMV 207
Query: 314 GIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPG--CT 371
G++ GE K ++ FP+ + HL G A F V+ E+ +P+LDD + KLLPG
Sbjct: 208 GMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKA 267
Query: 372 TIEQVKETLLQKCREVEQTAK--DQATDNAILDQLYKMVEIDIPQSLFEEQ 420
++E + E L ++ + E+ K + D L + D+P+ + E++
Sbjct: 268 SVEVLDEKLKEQIKN-EKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQE 317
>TIGR_CMR|CBU_0737 [details] [associations]
symbol:CBU_0737 "trigger factor" species:227377 "Coxiella
burnetii RSA 493" [GO:0003755 "peptidyl-prolyl cis-trans isomerase
activity" evidence=ISS] [GO:0006457 "protein folding" evidence=ISS]
HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 GO:GO:0015031 GO:GO:0007049
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003755 GO:GO:0000413
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
ProtClustDB:PRK01490 HOGENOM:HOG000218239 RefSeq:NP_819763.1
ProteinModelPortal:Q83DJ3 SMR:Q83DJ3 PRIDE:Q83DJ3 GeneID:1208628
KEGG:cbu:CBU_0737 PATRIC:17930165
BioCyc:CBUR227377:GJ7S-734-MONOMER Uniprot:Q83DJ3
Length = 442
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 75/307 (24%), Positives = 129/307 (42%)
Query: 134 RPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAMTSVTGRALRD-SVRIV-TKFSEME 191
R KIP+ G V+K ++IL+ + S A+ + +R+ +M+
Sbjct: 41 RTAKIPK-FRPGKASPAVVEKLYGKAILQEVGSELIQSSLREAVEEHQLRVAGAPDIKMD 99
Query: 192 KNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDTXXXXXXXXXLRRRHKSLG 251
K Y V +V PE+ G + VEI + LR+++
Sbjct: 100 KILRG-EPFKYVVNFEVYPEITLESLAGETIERTQVEITEEDLDKMLEA--LRKQYAEWK 156
Query: 252 SLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDK-VLPGFLD 310
+ DR + D I+D T + P F E G K ++ GF +
Sbjct: 157 EM----DRPAKADDRVIIDFEGT--------LDGKPFERGSAKDFQLELGSKRMIAGFEE 204
Query: 311 SISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKL---L 367
I G++ GE+K+ + FP + E L G A F + +++ +LP LD+ A +L
Sbjct: 205 GIEGMKPGESKALDITFPADYPSEDLAGKAAVFNITLQKVMAPELPVLDEQFAERLGIKE 264
Query: 368 PGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGA 427
G + Q T ++K EV +++ A+LD+L + I++P+SL E + L
Sbjct: 265 GGLEALRQKVRTNMEK--EVHHHMENKLK-MAVLDKLIERNPIEVPESLIEAEIDHLQ-- 319
Query: 428 QLLQMQV 434
Q+ + QV
Sbjct: 320 QMTRQQV 326
>UNIPROTKB|P0A850 [details] [associations]
symbol:tig "trigger factor; a molecular chaperone involved
in cell division" species:83333 "Escherichia coli K-12" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000413 "protein peptidyl-prolyl isomerization"
evidence=IEA;IDA] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0044183 "protein binding involved in protein folding"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0044444
"cytoplasmic part" evidence=TAS] [GO:0051083 "'de novo'
cotranslational protein folding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA;IDA] HAMAP:MF_00303
InterPro:IPR001179 InterPro:IPR005215 InterPro:IPR008880
InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697 Pfam:PF05698
PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005829 GO:GO:0051301
GO:GO:0016020 GO:GO:0006461 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0015031
GO:GO:0043022 GO:GO:0007049 EMBL:U82664 GO:GO:0044183 EMBL:X17642
EMBL:J05534 GO:GO:0003755 GO:GO:0051083 SUPFAM:SSF109998 PDB:2VRH
PDBsum:2VRH eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
ProtClustDB:PRK01490 HOGENOM:HOG000218239 EMBL:M34066 PIR:D64773
RefSeq:NP_414970.1 RefSeq:YP_488728.1 PDB:1L1P PDB:1OMS PDB:1P9Y
PDB:1W26 PDB:1W2B PDBsum:1L1P PDBsum:1OMS PDBsum:1P9Y PDBsum:1W26
PDBsum:1W2B ProteinModelPortal:P0A850 SMR:P0A850 DIP:DIP-36226N
IntAct:P0A850 MINT:MINT-1225982 SWISS-2DPAGE:P0A850 PaxDb:P0A850
PRIDE:P0A850 EnsemblBacteria:EBESCT00000000902
EnsemblBacteria:EBESCT00000017835 GeneID:12930847 GeneID:945081
KEGG:ecj:Y75_p0424 KEGG:eco:b0436 PATRIC:32116025 EchoBASE:EB0996
EcoGene:EG11003 BioCyc:EcoCyc:EG11003-MONOMER
BioCyc:ECOL316407:JW0426-MONOMER BioCyc:MetaCyc:EG11003-MONOMER
EvolutionaryTrace:P0A850 Genevestigator:P0A850 Uniprot:P0A850
Length = 432
Score = 146 (56.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 51/228 (22%), Positives = 102/228 (44%)
Query: 194 YSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDTXXXXXXXXXLRRRHKSLGSL 253
Y +Y V +V PEV+ + K +VE+ T R+ ++
Sbjct: 97 YKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEV---TDADVDGMLDTLRKQQATWKE 153
Query: 254 KIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSIS 313
K D ++ D +D + + +D +E + F G +++PGF D I
Sbjct: 154 K---DGAVEAEDRVTIDFTGS-VDGEE-----FEGGKASDFVLAMGQG-RMIPGFEDGIK 203
Query: 314 GIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTI 373
G + GE + + FPE + E+L+G A+F + +++ R+LP+L + ++
Sbjct: 204 GHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSV 263
Query: 374 EQVKETLLQKC-REVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 420
E ++ + + RE++ +++ AI + L K +ID+P +L + +
Sbjct: 264 EGLRAEVRKNMERELKSAIRNRVKSQAI-EGLVKANDIDVPAALIDSE 310
Score = 43 (20.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 410 IDIPQSLFEEQGRQLYGAQLLQMQV 434
+++P+ LFEEQ ++ LL +V
Sbjct: 330 LELPRELFEEQAKRRVVVGLLLGEV 354
>TIGR_CMR|CPS_3786 [details] [associations]
symbol:CPS_3786 "trigger factor" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=ISS] [GO:0006457 "protein folding"
evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179 InterPro:IPR005215
InterPro:IPR008880 InterPro:IPR008881 Pfam:PF00254 Pfam:PF05697
Pfam:PF05698 PIRSF:PIRSF003095 PROSITE:PS50059 GO:GO:0005737
GO:GO:0006457 GO:GO:0051301 GO:GO:0015031 GO:GO:0007049
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003755 GO:GO:0000413
SUPFAM:SSF109998 eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115 OMA:FPADYHG
ProtClustDB:PRK01490 RefSeq:YP_270453.1 ProteinModelPortal:Q47XL7
SMR:Q47XL7 STRING:Q47XL7 GeneID:3518404 KEGG:cps:CPS_3786
PATRIC:21470485 HOGENOM:HOG000218239
BioCyc:CPSY167879:GI48-3808-MONOMER Uniprot:Q47XL7
Length = 435
Score = 143 (55.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 55/240 (22%), Positives = 111/240 (46%)
Query: 188 SEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNL-KIVVE---IDNDTXXXXXXXXXL 243
S + K+ +L ++ ++ P V+ K+L KI +E +D L
Sbjct: 91 SFVAKSNEDGKALEFEATFEIYPVVE------LKDLEKIAIERPEVDVTDADLDEMFVTL 144
Query: 244 RRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDK 303
+++H++ K R + GD +D + +D +E + +GF + G +
Sbjct: 145 QKQHQTWKENK----RKTKSGDKLTLDFTGR-VDGEE-----FEGGKAEGFELELGAG-R 193
Query: 304 VLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLA 363
++PGF ++G++ G+ + ++ FPE + E+L+G A+F + + LP++D+ A
Sbjct: 194 MIPGFEKEVTGMKAGDEATIKVTFPEDYHAENLKGKDAEFDIVIHKTEGPILPEIDEEFA 253
Query: 364 GKLLPGCTT--IEQVK-ETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQ 420
KL G +E ++ E RE+ Q K + ++D L E+D+P +L ++
Sbjct: 254 -KLF-GIEEGGVEALRVEVSKNMARELTQAVKAKVKTQ-VIDGLLAGHEVDLPSALVTQE 310
>UNIPROTKB|Q9WZF8 [details] [associations]
symbol:tig "Trigger factor" species:243274 "Thermotoga
maritima MSB8" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_00303 InterPro:IPR005215 InterPro:IPR008880
InterPro:IPR008881 Pfam:PF05697 Pfam:PF05698 PIRSF:PIRSF003095
PROSITE:PS50059 GO:GO:0005737 GO:GO:0006457 GO:GO:0051301
GO:GO:0015031 GO:GO:0007049 EMBL:AE000512 GenomeReviews:AE000512_GR
GO:GO:0003755 GO:GO:0000413 SUPFAM:SSF109998 PDB:3GTY PDBsum:3GTY
eggNOG:COG0544 KO:K03545 Gene3D:1.10.3120.10 Gene3D:3.30.70.1050
SUPFAM:SSF102735 TIGRFAMs:TIGR00115 PIR:D72345 RefSeq:NP_228503.1
PDB:2NSA PDB:2NSB PDB:2NSC PDB:3GU0 PDBsum:2NSA PDBsum:2NSB
PDBsum:2NSC PDBsum:3GU0 ProteinModelPortal:Q9WZF8 SMR:Q9WZF8
IntAct:Q9WZF8 DNASU:898361 GeneID:898361 KEGG:tma:TM0694
PATRIC:23936306 OMA:SAKNIER ProtClustDB:CLSK875303
EvolutionaryTrace:Q9WZF8 Uniprot:Q9WZF8
Length = 425
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/86 (26%), Positives = 47/86 (54%)
Query: 333 QEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAK 392
+ G + + +E E++ R LP++ D LA + T+EQ+KE+L ++ +E+
Sbjct: 208 EREYEGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEM 267
Query: 393 DQATDNAILDQLYKMVEIDIPQSLFE 418
++ +L++L ++VEI+I E
Sbjct: 268 KESMREQLLEKLPEIVEIEISDRTLE 293
Score = 82 (33.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 111 AVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAMT 170
A +D R LN+ +V+IPGFR G+IP++VL +GE+ ++ T++ ++ +P +
Sbjct: 25 AQAEDKAVRYLNQ---RVEIPGFRKGRIPKNVLKMKLGEE-FQEYTLDFLMD-LIPDTLK 79
Query: 171 S--------VTGRALRD-SVRIVTKFSE 189
VT R L+D + R+V + E
Sbjct: 80 DRKLILSPIVTERELKDVTARVVVEVHE 107
>TIGR_CMR|APH_0971 [details] [associations]
symbol:APH_0971 "putative trigger factor" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003755 "peptidyl-prolyl
cis-trans isomerase activity" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] HAMAP:MF_00303 InterPro:IPR001179
InterPro:IPR005215 InterPro:IPR008880 InterPro:IPR008881
Pfam:PF00254 Pfam:PF05697 Pfam:PF05698 PIRSF:PIRSF003095
PROSITE:PS50059 GO:GO:0005737 GO:GO:0006457 GO:GO:0051301
GO:GO:0015031 GO:GO:0007049 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0003755 GO:GO:0000413 SUPFAM:SSF109998 RefSeq:YP_505538.1
ProteinModelPortal:Q2GJB3 STRING:Q2GJB3 GeneID:3930667
KEGG:aph:APH_0971 PATRIC:20950658 eggNOG:COG0544
HOGENOM:HOG000077957 KO:K03545 OMA:AISENIN ProtClustDB:CLSK749502
BioCyc:APHA212042:GHPM-983-MONOMER Gene3D:1.10.3120.10
Gene3D:3.30.70.1050 SUPFAM:SSF102735 TIGRFAMs:TIGR00115
Uniprot:Q2GJB3
Length = 439
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 64/303 (21%), Positives = 117/303 (38%)
Query: 121 LNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAMTSVTGRALRDS 180
L + ++ GFR GK+ + GE + + I + G +
Sbjct: 36 LQGIAATARMDGFRKGKVSPEFVRRMYGESIAGEVVAQVIDDISSKFLKEGDFGGIVTSG 95
Query: 181 VRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDTXXXXXXX 240
V I + ++ N L Y++ +V PEV +G +I V I +
Sbjct: 96 VEIKA-YPKVCSNSEGDGGLVYELKFEVMPEVPVVDIDGITLKEIEVNISQEDVDEFLED 154
Query: 241 XXLRRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTED 300
L+ + S + + RG+ GD V IS + + ++ + +GF F
Sbjct: 155 --LKANYPSFVDVDDES-RGVSDGDR--VTISYRSAFKGKA----LRGGSAQGFTFVLGK 205
Query: 301 GDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDD 360
G ++L F I G+++GE+K F+L FP + +H G + V L +D +
Sbjct: 206 G-QLLEQFERQIVGMKKGESKEFKLEFPLDYMAKHFAGKEVDMHVTVERLSVKDEINDRE 264
Query: 361 SLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLF-EE 419
+LA K G ++E + + +L+ L +D+P+ + +E
Sbjct: 265 TLASKC--GFGSVEDMVKFATDGLNRRFADMGSVVAQRELLEHLDASYSVDVPEYIVAQE 322
Query: 420 QGR 422
GR
Sbjct: 323 LGR 325
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 434 425 0.00084 118 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 608 (65 KB)
Total size of DFA: 240 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.45u 0.15s 38.60t Elapsed: 00:00:02
Total cpu time: 38.45u 0.15s 38.60t Elapsed: 00:00:02
Start: Mon May 20 23:04:34 2013 End: Mon May 20 23:04:36 2013