Query 013922
Match_columns 434
No_of_seqs 165 out of 1613
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 19:36:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t11_A Trigger factor, TF; hel 100.0 3.7E-66 1.3E-70 530.7 29.5 321 88-433 2-326 (392)
2 1w26_A Trigger factor, TF; cha 100.0 1.8E-64 6.1E-69 524.3 35.7 319 90-433 1-323 (432)
3 3gty_X Trigger factor, TF; cha 100.0 2.9E-58 9.9E-63 477.7 29.1 300 90-430 1-305 (433)
4 1p9y_A Trigger factor, TF; alp 100.0 6E-29 2E-33 215.0 14.3 119 89-215 3-121 (121)
5 2d3o_1 Trigger factor, TF; rib 99.9 2E-27 6.8E-32 202.8 7.6 112 90-210 1-112 (112)
6 2nsc_A Trigger factor, TF; cha 99.9 2.1E-26 7.1E-31 195.6 8.8 109 90-210 1-109 (109)
7 1hxv_A Trigger factor; FKBP fo 99.8 9.2E-19 3.1E-23 149.3 8.3 99 246-351 15-113 (113)
8 2pbc_A FK506-binding protein 2 99.4 4.3E-13 1.5E-17 111.4 9.6 90 258-353 3-99 (102)
9 1r9h_A FKB-6, FK506 binding pr 99.3 2.9E-12 9.8E-17 112.1 9.5 96 260-361 29-131 (135)
10 2vn1_A 70 kDa peptidylprolyl i 99.3 5.3E-12 1.8E-16 109.3 9.7 92 258-354 31-129 (129)
11 2k8i_A SLYD, peptidyl-prolyl C 99.3 1.7E-11 5.8E-16 111.6 11.7 95 261-365 3-150 (171)
12 1yat_A FK506 binding protein; 99.3 1.4E-11 4.8E-16 104.1 10.3 87 259-351 19-113 (113)
13 2ppn_A FK506-binding protein 1 99.2 2E-11 6.8E-16 102.0 9.3 85 261-351 16-107 (107)
14 2y78_A Peptidyl-prolyl CIS-tra 99.2 2.4E-11 8.1E-16 106.1 9.8 87 258-350 40-133 (133)
15 2lgo_A FKBP; infectious diseas 99.2 3.6E-11 1.2E-15 104.5 10.4 86 259-350 37-130 (130)
16 1jvw_A Macrophage infectivity 99.2 4.3E-11 1.5E-15 108.6 10.3 104 261-386 53-163 (167)
17 2kr7_A FKBP-type peptidyl-prol 99.2 1E-10 3.4E-15 104.4 10.8 90 258-352 4-146 (151)
18 3pr9_A FKBP-type peptidyl-prol 99.1 7.6E-11 2.6E-15 105.9 8.4 84 261-351 2-149 (157)
19 4dt4_A FKBP-type 16 kDa peptid 99.1 1.3E-10 4.6E-15 105.4 9.9 88 260-353 24-166 (169)
20 3kz7_A FK506-binding protein 3 99.1 1.9E-10 6.6E-15 97.9 10.1 85 260-350 19-118 (119)
21 4dip_A Peptidyl-prolyl CIS-tra 99.1 1.6E-10 5.5E-15 99.4 9.6 90 258-352 26-123 (125)
22 1u79_A FKBP-type peptidyl-prol 99.1 1.7E-10 6E-15 99.9 8.3 87 258-350 24-128 (129)
23 2d9f_A FK506-binding protein 8 99.1 1.5E-10 5.1E-15 101.1 7.5 91 260-358 33-129 (135)
24 2kfw_A FKBP-type peptidyl-prol 99.1 2.7E-10 9.3E-15 105.8 9.6 94 261-364 3-149 (196)
25 3o5q_A Peptidyl-prolyl CIS-tra 99.1 3.6E-10 1.2E-14 97.7 9.7 87 260-352 34-127 (128)
26 3b7x_A FK506-binding protein 6 99.1 1.6E-10 5.6E-15 100.8 7.3 88 259-351 39-133 (134)
27 2awg_A 38 kDa FK-506 binding p 99.1 3.6E-10 1.2E-14 96.3 9.1 84 260-351 29-117 (118)
28 3prb_A FKBP-type peptidyl-prol 99.1 1.2E-10 4E-15 110.8 6.5 96 261-363 2-161 (231)
29 3cgm_A SLYD, peptidyl-prolyl C 99.1 3.8E-10 1.3E-14 101.4 8.8 89 261-363 3-144 (158)
30 3o5e_A Peptidyl-prolyl CIS-tra 99.1 6.2E-10 2.1E-14 98.3 10.0 87 260-352 50-143 (144)
31 1ix5_A FKBP; ppiase, isomerase 99.0 2.1E-10 7.2E-15 102.3 5.8 65 261-331 2-81 (151)
32 2f4e_A ATFKBP42; FKBP-like, al 99.0 1E-09 3.5E-14 100.6 9.1 92 258-354 61-162 (180)
33 2jwx_A FKBP38NTD, FK506-bindin 99.0 2E-09 7E-14 96.5 9.6 87 260-354 59-151 (157)
34 1q6h_A FKBP-type peptidyl-prol 99.0 1.9E-09 6.6E-14 102.1 9.8 86 258-351 133-224 (224)
35 1fd9_A Protein (macrophage inf 98.9 2.2E-09 7.5E-14 101.0 9.5 87 258-352 118-211 (213)
36 3uf8_A Ubiquitin-like protein 98.9 3.3E-09 1.1E-13 99.5 9.9 87 258-350 116-209 (209)
37 3jxv_A 70 kDa peptidyl-prolyl 98.9 3.6E-09 1.2E-13 106.7 10.0 88 259-352 258-355 (356)
38 3oe2_A Peptidyl-prolyl CIS-tra 98.8 8.6E-09 2.9E-13 97.2 10.0 85 259-352 130-219 (219)
39 1q1c_A FK506-binding protein 4 98.8 4.9E-09 1.7E-13 102.5 8.5 85 260-354 183-276 (280)
40 2if4_A ATFKBP42; FKBP-like, al 98.8 6E-09 2.1E-13 103.3 8.1 90 258-352 61-160 (338)
41 1q1c_A FK506-binding protein 4 98.8 1.4E-08 4.8E-13 99.2 10.5 90 261-356 67-163 (280)
42 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 7.7E-09 2.6E-13 106.8 8.2 98 261-365 47-151 (457)
43 3jxv_A 70 kDa peptidyl-prolyl 98.6 3.7E-09 1.3E-13 106.6 -2.4 102 260-367 26-134 (356)
44 2lkn_A AH receptor-interacting 98.5 1.8E-07 6.2E-12 84.4 7.7 62 261-326 27-90 (165)
45 1zxj_A MPN555, hypothetical pr 98.0 8.1E-07 2.8E-11 83.5 1.0 65 365-433 50-124 (218)
46 2nsa_A Trigger factor, TF; cha 97.6 1E-05 3.4E-10 72.7 0.1 61 369-433 2-62 (170)
47 1p5q_A FKBP52, FK506-binding p 95.7 0.026 9E-07 55.0 8.7 84 260-352 40-131 (336)
48 1kt0_A FKBP51, 51 kDa FK506-bi 91.4 0.39 1.3E-05 48.8 7.7 85 259-352 160-252 (457)
49 2f23_A Anti-cleavage anti-GREA 80.3 10 0.00036 32.9 9.7 33 306-351 123-155 (156)
50 1te7_A Hypothetical UPF0267 pr 78.6 7.9 0.00027 31.4 7.8 40 341-383 49-88 (103)
51 1grj_A GREA protein; transcrip 64.2 21 0.00072 31.1 7.7 32 307-351 125-156 (158)
52 3bmb_A Regulator of nucleoside 59.4 10 0.00034 32.3 4.6 34 307-352 93-126 (136)
53 2p4v_A Transcription elongatio 55.5 12 0.00042 32.7 4.5 33 307-352 123-155 (158)
54 3rfw_A Cell-binding factor 2; 54.3 29 0.001 31.9 7.3 79 302-412 171-251 (252)
55 2pn0_A Prokaryotic transcripti 53.0 12 0.00041 32.0 4.0 34 307-352 96-129 (141)
56 3u43_A Colicin-E2 immunity pro 38.0 22 0.00075 28.5 3.0 24 113-136 63-86 (94)
57 3rgc_A Possible periplasmic pr 37.7 46 0.0016 30.5 5.8 79 302-411 170-248 (252)
58 1unk_A Colicin E7; immunity pr 36.0 28 0.00095 27.5 3.3 23 114-136 65-87 (87)
59 1uh6_A Ubiquitin-like 5; beta- 33.8 51 0.0018 26.5 4.7 39 81-122 21-59 (100)
60 1gxg_A Colicin E8 immunity pro 32.8 32 0.0011 27.0 3.2 24 113-136 62-85 (85)
61 1fr2_A Colicin E9 immunity pro 32.7 28 0.00097 27.4 2.8 24 113-136 63-86 (86)
62 3h36_A Polyribonucleotide nucl 28.9 1.1E+02 0.0036 23.7 5.7 75 354-431 5-83 (93)
63 2k0d_X IMME7, colicin-E7 immun 27.2 26 0.00088 28.4 1.7 22 115-136 80-101 (101)
64 2nsa_A Trigger factor, TF; cha 26.5 2E+02 0.0067 24.4 7.7 48 372-426 76-123 (170)
65 3nrk_A LIC12922; NC domain, pa 25.2 2.1E+02 0.0072 27.2 8.3 81 303-416 225-308 (325)
66 1nb0_A Hypothetical protein FL 24.4 3.3E+02 0.011 23.2 8.7 52 320-387 74-125 (147)
67 1n08_A Putative riboflavin kin 21.8 3.9E+02 0.013 23.1 8.8 52 320-387 92-143 (163)
No 1
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=100.00 E-value=3.7e-66 Score=530.74 Aligned_cols=321 Identities=21% Similarity=0.364 Sum_probs=296.9
Q ss_pred CccEEEEEeCCCceEEEEEEEchhhHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHH
Q 013922 88 ADIEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPH 167 (434)
Q Consensus 88 ~~m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~~~~k~akIPGFRkGKvP~~iI~~~yG~~~i~~e~~~~li~~~~~~ 167 (434)
..|+|+++++++++++|+|+||++++++++++++++++++++||||||||||++||+++||. +|+.++++++++.+|.+
T Consensus 2 ~~M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~~i~k~yG~-~v~~ea~~~~~~~~~~~ 80 (392)
T 1t11_A 2 SHMQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK-AVRQDVLGEVMQRHFIE 80 (392)
T ss_dssp -CCEEEEEECSTTEEEEEEEECHHHHHHHHHHHHHHHHTTCCCTTSCSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcCCcEEEEEEEEcHHHHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHhH-HHHHHHHHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999999999999999999995 89999999999999999
Q ss_pred HHHhhhcccCCcccccccccchhhhccCCCCceEEEEEEeeecceecCCCCCcceeEEEEe----cchhhHHHHHHHHHH
Q 013922 168 AMTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVE----IDNDTAAQQAAEEEL 243 (434)
Q Consensus 168 ai~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~f~f~v~~ev~Pev~l~~~~~yk~i~v~v~----~dedv~~~~~~e~~L 243 (434)
|+++.+++|++.| .+. . ..+.++++|+|+++|+|+|+|+|+ +|++++|+++ ++++|++ .|
T Consensus 81 ai~e~~l~~~~~P-~i~--~----~~~~~~~~~~f~~~~ev~Pev~l~---~y~~l~v~~~~~~Vtde~Vd~------~l 144 (392)
T 1t11_A 81 AIVKEKINPAGAP-TFA--P----VEIGEGKDLVFTATFEVYPEVELK---GLENIAVEKPAAEVTDADVAE------ML 144 (392)
T ss_dssp HHHHTTCCBSSCC-EEE--E----EECCTTSCEEEEEEEEBCCCCCCT---TCTTCEEESSCC---CTHHHH------HH
T ss_pred HHHHcCCCcCCCC-Ccc--c----cccCCCCCEEEEEEecCCCceecC---CCCceEEEeCCCCcCHHHHHH------HH
Confidence 9999999999875 221 1 246678899999999999999997 8999999975 4667776 46
Q ss_pred HHHHhhcCccccccCCCCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEE
Q 013922 244 RRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSF 323 (434)
Q Consensus 244 ~~~~~~~a~~~~v~dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~ 323 (434)
.++++++++|.++ +|+++.||+|+|||.++ .+|+.|+++...++.|.+| .|.++|||+++|+||++||+++|
T Consensus 145 ~~l~~~~a~~~~~-~~~~~~gD~V~i~y~g~------~dG~~fd~~~~~~~~~~lG-~g~~ipgfee~L~Gmk~Ge~~~v 216 (392)
T 1t11_A 145 ETLRKQQATWKEV-DEAAENGKRVSIDFVGS------IDGVEFEGGKAENFPLEMG-AGRMIPGFEDGIVGKTKGMEFVI 216 (392)
T ss_dssp HHHHHHHCEEEEC-SCCCCTTCEEEEEEEEE------SSSSCCTTCEEEEEEEETT-SCCBSTTSGGGTTTCCSSCCCCE
T ss_pred HHHHHhcCeeeec-CCCCCCCCEEEEEEEEE------ECCEEccCCCccceEEEec-CCCcchhHHHHhCCCCCCCEEEE
Confidence 6677778888875 89999999999999998 5799999988899999999 57899999999999999999999
Q ss_pred EEcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013922 324 RLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQ 403 (434)
Q Consensus 324 ~i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~l~~~~~~~~~~~~~~~ll~~ 403 (434)
+++||++|+.+.++|+++.|+|+|++|+++++||||||||+.++++++|+++||+.||++|+++++.++++.++++++++
T Consensus 217 ~v~fp~dy~~~~laGk~~~F~V~v~~i~~~~lpeldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~ 296 (392)
T 1t11_A 217 DVTFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEG 296 (392)
T ss_dssp EEECCTTCSCTTTSSCEEEECCCEEEEEEEECCCCSTGGGGGGSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT
T ss_pred EEeCccccccCCCCCCeEEEEEEEEEEEcCCCCCcCHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999885469999999999999999999999999999999999
Q ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHhcc
Q 013922 404 LYKMVEIDIPQSLFEEQGRQLYGAQLLQMQ 433 (434)
Q Consensus 404 L~e~~~~dlPeslv~~e~~~~~~~~l~~lq 433 (434)
|++.++|+||++||+++++++++++..+|+
T Consensus 297 l~e~~~~~lP~~lv~~e~~~~~~~~~~~l~ 326 (392)
T 1t11_A 297 LVKENEIQVPSALIDQEINVLRQQAAQRFG 326 (392)
T ss_dssp BCSCCCEEECHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999876
No 2
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=100.00 E-value=1.8e-64 Score=524.34 Aligned_cols=319 Identities=20% Similarity=0.363 Sum_probs=295.8
Q ss_pred cEEEEEeCCCceEEEEEEEchhhHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 013922 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (434)
Q Consensus 90 m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~~~~k~akIPGFRkGKvP~~iI~~~yG~~~i~~e~~~~li~~~~~~ai 169 (434)
|+|+++++++++++|+|+||+++++.+++++|++++++++||||||||||++||+++||. +|+.++++++++.+|.+|+
T Consensus 1 M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~vi~~~yG~-~v~~ea~~~~~~~~~~~ai 79 (432)
T 1w26_A 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA-SVRQDVLGDLMSRNFIDAI 79 (432)
T ss_dssp CEEECCBCSTTEEEEEEEECHHHHHHHHHHHHHHHHHHTTCGGGCCSSSCHHHHHHHHCT-TTHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCcEEEEEEEEcHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCHHHHHHHHhH-HHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 7999999999999999999
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEeeecceecCCCCCcceeEEEEe----cchhhHHHHHHHHHHHH
Q 013922 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVE----IDNDTAAQQAAEEELRR 245 (434)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~f~f~v~~ev~Pev~l~~~~~yk~i~v~v~----~dedv~~~~~~e~~L~~ 245 (434)
++.+++|++.| .+. . ..+.++++|+|+++|+|+|+|+|+ +|++++|+++ ++++|++ .|.+
T Consensus 80 ~e~~l~~~~~P-~i~--~----~~~~~~~~~~f~~~~~v~Pev~l~---~y~~l~v~~~~~eVtde~Vd~------~l~~ 143 (432)
T 1w26_A 80 IKEKINPAGAP-TYV--P----GEYKLGEDFTYSVEFEVYPEVELQ---GLEAIEVEKPIVEVTDADVDG------MLDT 143 (432)
T ss_dssp HHSCCCEEEEE-EEE--E----CCCCTTSCEEEEEEEEECCCCCCC---CTTTCBCCEEECCCCHHHHHH------HHHH
T ss_pred HhcCCCCCCCC-Ccc--c----cccCCCCcEEEEEEeccCCCeecC---CCCceEEEecCCCcCHHHHHH------HHHH
Confidence 99999998864 221 1 246678899999999999999997 8999998875 3566766 4667
Q ss_pred HHhhcCccccccCCCCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEE
Q 013922 246 RHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (434)
Q Consensus 246 ~~~~~a~~~~v~dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i 325 (434)
+++++++|.++ +++++.||+|++||.++ .+|+.|+++...++.|.+| .+.++|||+++|+||++|++++|.+
T Consensus 144 l~~~~a~~~~~-~~~~~~gD~V~i~y~g~------~dG~~fd~~~~~~~~~~lG-~g~~ipgfee~L~G~k~Ge~~~v~v 215 (432)
T 1w26_A 144 LRKQQATWKEK-DGAVEAEDRVTIDFTGS------VDGEEFEGGKASDFVLAMG-QGRMIPGFEDGIKGHKAGEEFTIDV 215 (432)
T ss_dssp HHHHTCEECCC-SSCCCTTCEEEECEEEE------SSSCBCSSCCCSSEEEETT-SCCSCTTHHHHSSSCCSSCEEEEEE
T ss_pred HHHhCCeeeec-CCCCCCCCEEEEEEEEe------eCCeEccCCCccceEEEeC-CCCcchHHHHHhCCCCCCCEEEEEE
Confidence 77778888874 89999999999999998 5799999988899999999 5789999999999999999999999
Q ss_pred cCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013922 326 AFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLY 405 (434)
Q Consensus 326 ~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~l~~~~~~~~~~~~~~~ll~~L~ 405 (434)
+||++|+..+++|+++.|+|+|++|+++++||||||||+.++++++|+++||+.||++|+++++.++++.++++++++|+
T Consensus 216 ~~~~~yg~~~lag~~~~F~V~v~~v~~~~lpeldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~l~ 295 (432)
T 1w26_A 216 TFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLV 295 (432)
T ss_dssp ECCTTCSCTTTSSCEEEEEEECCEECCEECCCCSHHHHTTTTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCCCCCCceEEEEEEEEEEeccCCCCcchHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988546999999999999999999999999999999999999
Q ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHhcc
Q 013922 406 KMVEIDIPQSLFEEQGRQLYGAQLLQMQ 433 (434)
Q Consensus 406 e~~~~dlPeslv~~e~~~~~~~~l~~lq 433 (434)
+.++|+||++||+++++++++++..+||
T Consensus 296 e~~~~~lP~~lv~~e~~~~~~~~~~~l~ 323 (432)
T 1w26_A 296 KANDIDVPAALIDSEIDVLRRQAAQRFG 323 (432)
T ss_dssp HHCCCCCCHHHHHHHHHHHHHHHHTTTT
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998875
No 3
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=100.00 E-value=2.9e-58 Score=477.74 Aligned_cols=300 Identities=19% Similarity=0.317 Sum_probs=263.9
Q ss_pred cEEEEEeCCCceEEEEEEEchhhHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 013922 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (434)
Q Consensus 90 m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~~~~k~akIPGFRkGKvP~~iI~~~yG~~~i~~e~~~~li~~~~~~ai 169 (434)
|+|++++.+++.+.|+|+||+++++.+++++|++++++++||||||||||++||+++||+ .++.++++.+++.++.. +
T Consensus 1 M~v~~~~~e~~~~~l~i~v~~~~~~~~~~~~~k~~~k~v~ipGFRkGKvP~~vi~k~yG~-~v~~ev~~~l~~~~~~~-~ 78 (433)
T 3gty_X 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE-EFQEYTLDFLMDLIPDT-L 78 (433)
T ss_dssp CEEEEEEEETTEEEEEEECCTTHHHHHHHHHHHHHHTSCCCCC--CCCCCSHHHHTTSTT-HHHHHHHHHHHTTSTTT-S
T ss_pred CceEEEEcCCCEEEEEEEEcHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHhhH-HHHHHHHHHHHHHHHHH-H
Confidence 899999999999999999999999999999999999999999999999999999999998 78889999999988744 4
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEeeecceecCCCCCcceeEEEEec-----chhhHHHHHHHHHHH
Q 013922 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEI-----DNDTAAQQAAEEELR 244 (434)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~f~f~v~~ev~Pev~l~~~~~yk~i~v~v~~-----dedv~~~~~~e~~L~ 244 (434)
.+. +++++| .+. . ..+ .+++|+|+++|+|+|+|+|+ +|++++|+++. +++|+ +.|.
T Consensus 79 ~~e--~~~~~P-~i~--~----~~~-~~~~~~f~~~vev~Pev~l~---~y~~l~v~~~~~~eVtde~Vd------~~l~ 139 (433)
T 3gty_X 79 KDR--KLILSP-IVT--E----REL-KDVTARVVVEVHEEPEVRIG---DISKIEVEKVDEEKVLEKYVE------RRIE 139 (433)
T ss_dssp SSS--CBSSCC-EEE--E----EEE-CSSCEEEEEEEEBCCEEECC---CGGGSEEEEECHHHHHHHHHH------HHHH
T ss_pred Hhc--CCCCCC-CcC--c----ccc-cCCCEEEEEEEEecCCcccC---CcCcceeeecCCCCCCHHHHH------HHHH
Confidence 333 566543 221 1 123 35689999999999999997 89999998752 33444 4688
Q ss_pred HHHhhcCccccccCCCCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEE
Q 013922 245 RRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFR 324 (434)
Q Consensus 245 ~~~~~~a~~~~v~dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~ 324 (434)
.+++++++|.++ +|+++.||+|+|||+++ .+|++|+++...++.+.+|+ +. | |+++|+||++||+++|+
T Consensus 140 ~l~~~~a~~~~v-e~~a~~gD~V~id~~~~------~dG~~~~~~~~~~~~l~~g~-~~--~-fe~~liG~k~Ge~~~~~ 208 (433)
T 3gty_X 140 DLRESHALLEPK-EGPAEAGDLVRVNMEVY------NEEGKKLTSREYEYVISEDE-DR--P-FVKDLVGKKKGDVVEIE 208 (433)
T ss_dssp HHHHHTCCEEEC-CSCCCTTSEEEEEEEEE------CTTSCEEEEEEEEEECCSSC-CC--T-THHHHTTCCTTCEEEEE
T ss_pred HHHHhcCeeecc-ccccCCCCEEEEEEEEE------ECCEECcCCCCCCeEEEecC-Cc--h-HHHHhCCCCCCceEEEE
Confidence 888889999886 78999999999999998 68999998888889888884 44 4 99999999999999999
Q ss_pred EcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013922 325 LAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQL 404 (434)
Q Consensus 325 i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~l~~~~~~~~~~~~~~~ll~~L 404 (434)
++| +||+++|+|||++|+++++||||||||++++++++|+++||+.||++|+++++.+++..++++++++|
T Consensus 209 vtF---------aGk~a~F~VtV~~Ik~~~lPEldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~l 279 (433)
T 3gty_X 209 REY---------EGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKL 279 (433)
T ss_dssp EEE---------TTEEEEEEEEEEEEEEECCCCSSHHHHHTTCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred Eee---------CCCeEEEEEEEEEEEEecCCcccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988 69999999999999999999999999999965699999999999999999999999999999999999
Q ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHH
Q 013922 405 YKMVEIDIPQSLFEEQGRQLYGAQLL 430 (434)
Q Consensus 405 ~e~~~~dlPeslv~~e~~~~~~~~l~ 430 (434)
++.++|+||++||+++++++++++..
T Consensus 280 ~e~~~~~lP~~lv~~e~~~~~~~l~~ 305 (433)
T 3gty_X 280 PEIVEIEISDRTLEILVNEAINRLKR 305 (433)
T ss_dssp HHHCEEECCHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876543
No 4
>1p9y_A Trigger factor, TF; alpha-beta protein, isomerase; 2.15A {Escherichia coli} SCOP: d.241.2.1 PDB: 1oms_A*
Probab=99.96 E-value=6e-29 Score=215.01 Aligned_cols=119 Identities=20% Similarity=0.348 Sum_probs=108.4
Q ss_pred ccEEEEEeCCCceEEEEEEEchhhHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHH
Q 013922 89 DIEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHA 168 (434)
Q Consensus 89 ~m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~~~~k~akIPGFRkGKvP~~iI~~~yG~~~i~~e~~~~li~~~~~~a 168 (434)
.|+|+++++++++++|+|+||++++++++++++++++++++||||||||||++||+++||. ++++++++++++.+|.+|
T Consensus 3 ~M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~v~ipGFRkGKvP~~vi~k~yG~-~v~~ea~~~~i~~~~~~a 81 (121)
T 1p9y_A 3 HMQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGLRKGKVPMNIVAQRYGA-SVRQDVLGDLMSRNFIDA 81 (121)
T ss_dssp -CEEEEEECSTTEEEEEEEECHHHHHHHHHHHHHHHHTTCCCTTSCTTCSCHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEEEEEEECHHHHHHHHHHHHHHHHhhCccCCcCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999999999999999999999999996 799999999999999999
Q ss_pred HHhhhcccCCcccccccccchhhhccCCCCceEEEEEEeeecceecC
Q 013922 169 MTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWN 215 (434)
Q Consensus 169 i~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~f~f~v~~ev~Pev~l~ 215 (434)
+++.+++|++.| .+. . ..+.++++|+|+++|+|+|+|+|+
T Consensus 82 i~e~~l~~~~~P-~i~--~----~~~~~~~~~~f~~~~ev~Pev~l~ 121 (121)
T 1p9y_A 82 IIKEKINPAGAP-TYV--P----GEYKLGEDFTYSVEFEVYPEVELQ 121 (121)
T ss_dssp HHHTTCCCEEEE-EEE--E----CCCCSSSCEEEEEEEECCCCCCC-
T ss_pred HHHcCCCCCCCC-ccc--c----cccCCCCCEEEEEEEEEcCccccC
Confidence 999999998764 221 1 246678899999999999999983
No 5
>2d3o_1 Trigger factor, TF; ribosome, nascent chain, protein folding, SRP; 3.35A {Deinococcus radiodurans} PDB: 2aar_7
Probab=99.94 E-value=2e-27 Score=202.79 Aligned_cols=112 Identities=23% Similarity=0.393 Sum_probs=91.9
Q ss_pred cEEEEEeCCCceEEEEEEEchhhHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 013922 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (434)
Q Consensus 90 m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~~~~k~akIPGFRkGKvP~~iI~~~yG~~~i~~e~~~~li~~~~~~ai 169 (434)
|++++++ ++++++|+|+||++++++++++++++++++++||||||||||++||+++||++++++++++++++++|.+|+
T Consensus 1 M~v~~e~-~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~vi~k~yG~~~v~~ea~~~~i~~~~~~ai 79 (112)
T 2d3o_1 1 MAELISK-EGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVIENRVGKGYVESQVRDRLLETHYSQGL 79 (112)
T ss_dssp ----------CCEEEEECCCGGGTHHHHHHHHHHHHTTSCBTTBCTTCCCSTTHHHHTTTTSSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEc-CCcEEEEEEEECHHHHHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 999999999999999999999999999999999999999999999999999658999999999999999999
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEeeec
Q 013922 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAP 210 (434)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~f~f~v~~ev~P 210 (434)
++.+++|++.| .+ + . . +.++++|+|+++|+|+|
T Consensus 80 ~e~~l~~~~~P-~i----~-~-~-~~~~~~~~f~~~~ev~P 112 (112)
T 2d3o_1 80 RELGLNLVDAT-VD----P-Q-D-VQSGQAFEFTVKGETYP 112 (112)
T ss_dssp HHSCCCCCCEE-CC----C-C-C-CCSSSCCCEEEEEC---
T ss_pred HHcCCCCCCCC-cc----c-c-c-ccCCCCEEEEEEEEecC
Confidence 99999998764 22 1 1 2 66788999999999998
No 6
>2nsc_A Trigger factor, TF; chaperone; 2.20A {Thermotoga maritima} PDB: 2nsb_A
Probab=99.93 E-value=2.1e-26 Score=195.55 Aligned_cols=109 Identities=22% Similarity=0.320 Sum_probs=99.4
Q ss_pred cEEEEEeCCCceEEEEEEEchhhHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 013922 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (434)
Q Consensus 90 m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~~~~k~akIPGFRkGKvP~~iI~~~yG~~~i~~e~~~~li~~~~~~ai 169 (434)
|+|+++++++++++|+|+||++++++++++++++++++++||||||||||+++|+++||. +++++++++++++ |.+|+
T Consensus 1 M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~vi~k~yG~-~v~~ea~~~~i~~-~~~ai 78 (109)
T 2nsc_A 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE-EFQEYTLDFLMDL-IPDTL 78 (109)
T ss_dssp CEEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHHHTTCCCTTSCTTCCCHHHHHHHHGG-GHHHHHHHHHHTT-HHHHT
T ss_pred CceEEEEcCCCEEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcCCCCCCHHHHHHHHhH-HHHHHHHHHHHHH-HHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 7999999999999 99999
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEeeec
Q 013922 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAP 210 (434)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~f~f~v~~ev~P 210 (434)
++.++ ++.| .+. . ..+. +++|+|+++|+|+|
T Consensus 79 ~e~~l--~~~P-~i~--~----~~~~-~~~~~f~~~~ev~P 109 (109)
T 2nsc_A 79 KDRKL--ILSP-IVT--E----RELK-DVTARVVVEVHEEP 109 (109)
T ss_dssp TTSCC--SSCC-CCC--C----CCCC-CCCCCCCCCCCCCC
T ss_pred HHcCc--CCCC-ccc--c----cccc-CCCEEEEEEEEecC
Confidence 99887 6543 221 1 2466 88999999999998
No 7
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.76 E-value=9.2e-19 Score=149.30 Aligned_cols=99 Identities=20% Similarity=0.424 Sum_probs=80.0
Q ss_pred HHhhcCccccccCCCCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEE
Q 013922 246 RHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (434)
Q Consensus 246 ~~~~~a~~~~v~dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i 325 (434)
+++++++|.++++++++.||+|+|+|.++ .+|+.|+++..+++.|.+| .+.++|+|+++|+||++|++++|.+
T Consensus 15 l~~~~a~~~~v~~~~~~~gD~V~v~Y~g~------~dG~~fdss~~~p~~f~lG-~g~vi~G~ee~L~Gmk~Ge~~~v~i 87 (113)
T 1hxv_A 15 LAKTKSTMVDVSDKKLANGDIAIIDFTGI------VDNKKLASASAQNYELTIG-SNSFIKGFETGLIAMKVNQKKTLAL 87 (113)
T ss_dssp --------------CCCSSEEEEEEEEEE------ETTEECSTTCCSEEEEEET-SSCSCTTHHHHHHTSCSSEEEEECC
T ss_pred HHHhCCeEEecCCCCCCCCCEEEEEEEEE------ECCEEcccCCccCEEEEEC-CCChhHHHHHHHCCCCCCCEEEEEE
Confidence 44556778887678999999999999998 4789999887889999999 5789999999999999999999999
Q ss_pred cCCCCCCCCCCCCceeEEEEEEEEee
Q 013922 326 AFPESWRQEHLRGVQAQFTVECRELF 351 (434)
Q Consensus 326 ~fPed~~~~~laGk~v~f~V~Ik~Ik 351 (434)
+||++|+...++|+++.|+|+|++|+
T Consensus 88 ~fP~~Yg~~~~~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 88 TFPSDYHVKELQSKPVTFEVVLKAIK 113 (113)
T ss_dssp CCCTTSSSSGGGSCCCEEEEEECCBC
T ss_pred eCchhhCcCCCCCCEEEEEEEEEEEC
Confidence 99999999999999999999999885
No 8
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.43 E-value=4.3e-13 Score=111.37 Aligned_cols=90 Identities=16% Similarity=0.251 Sum_probs=79.3
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
+++++.||.|+|+|.++. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|++++|.++.+.+|....
T Consensus 3 g~~~~~gd~V~v~y~~~~-----~dG~~~d~s~~~~~p~~f~lG-~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~ 76 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKL-----EDGTEFDSSLPQNQPFVFSLG-TGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERG 76 (102)
T ss_dssp CCCCCTTCEEEEEEEEEC-----TTSCEEEESTTTTCCEEEETT-SSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTC
T ss_pred CCcCCCCCEEEEEEEEEE-----CCCCEEEeCCCCCCCEEEEeC-CCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCC
Confidence 467899999999999982 4788888764 478999999 47899999999999999999999999888898877
Q ss_pred C-----CCceeEEEEEEEEeecC
Q 013922 336 L-----RGVQAQFTVECRELFYR 353 (434)
Q Consensus 336 l-----aGk~v~f~V~Ik~Ik~~ 353 (434)
+ +|+++.|+|+|++|+++
T Consensus 77 ~~~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 77 APPKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp BTTTBCTTCCEEEEEEEEEEGGG
T ss_pred CCCCcCcCCeEEEEEEEEEeccc
Confidence 7 89999999999999874
No 9
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.34 E-value=2.9e-12 Score=112.13 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=78.2
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC-
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l- 336 (434)
.++.||.|+|+|+++. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|++++|.++.+.+|....+
T Consensus 29 ~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~~~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~ 102 (135)
T 1r9h_A 29 KPTTGTTVKVHYVGTL-----ENGTKFDSSRDRGDQFSFNLG-RGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSP 102 (135)
T ss_dssp CCCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETT-TTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBT
T ss_pred CCCCCCEEEEEEEEEE-----CCCCEEEecCcCCCCEEEEeC-CCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCC
Confidence 5789999999999983 4788888764 478999999 478999999999999999999999998889988777
Q ss_pred ----CCceeEEEEEEEEeecCCCCCCCHH
Q 013922 337 ----RGVQAQFTVECRELFYRDLPKLDDS 361 (434)
Q Consensus 337 ----aGk~v~f~V~Ik~Ik~~~lPELdDe 361 (434)
+++++.|+|++++|+++.+|+-+|.
T Consensus 103 ~~Ip~~~~l~f~v~l~~i~~~~l~~~~d~ 131 (135)
T 1r9h_A 103 PKIPGGATLIFEVELFEWSAEDISPDRDG 131 (135)
T ss_dssp TTBCTTCCEEEEEEEEEEEC---------
T ss_pred CCcCcCCcEEEEEEEEEeecCCcCcCCCC
Confidence 8999999999999999999887763
No 10
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.31 E-value=5.3e-12 Score=109.34 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=79.6
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
.++++.||.|+|+|.++. . .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|++++|.++.+.+|....
T Consensus 31 g~~~~~gd~V~v~Y~g~~-~---~dG~~fd~s~~~~~p~~f~lG-~g~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~ 105 (129)
T 2vn1_A 31 ENIPKKGNEVTVHYVGKL-E---STGKVFDSSFDRNVPFKFHLE-QGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEG 105 (129)
T ss_dssp GGSCCTTCEEEEEEEEEE-T---TTCCEEEEGGGTTCCEEEETT-SSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTC
T ss_pred CCcCCCCCEEEEEEEEEE-C---CCCeEEEecCCCCccEEEEeC-CCCcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCC
Confidence 357899999999999982 1 3788888764 478999999 46899999999999999999999999888898876
Q ss_pred C-----CCceeEEEEEEEEeecCC
Q 013922 336 L-----RGVQAQFTVECRELFYRD 354 (434)
Q Consensus 336 l-----aGk~v~f~V~Ik~Ik~~~ 354 (434)
+ +|+++.|+|+|++|++++
T Consensus 106 ~~~~Ip~~~~l~f~vel~~v~~~~ 129 (129)
T 2vn1_A 106 CGESIPGNSVLLFEIELLSFRELE 129 (129)
T ss_dssp BTTTBCTTCCEEEEEEEEEEECCC
T ss_pred CCCCcCCCCeEEEEEEEEEEecCC
Confidence 6 899999999999998753
No 11
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.28 E-value=1.7e-11 Score=111.61 Aligned_cols=95 Identities=13% Similarity=0.200 Sum_probs=79.6
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcc-cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCC-----
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET-KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQE----- 334 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~-~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~----- 334 (434)
++.||+|+|+|+++. .+|+.|+++.. +++.|.+| .+.++|+|+++|+||++|++++|.++.+++|+..
T Consensus 3 i~~gd~V~v~Y~g~~-----~dG~~fdss~~~~P~~f~lG-~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~~~v 76 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRT-----EDGVLVDESPVSAPLDYLHG-HGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLV 76 (171)
T ss_dssp CCTTEEEEEEEEEEE-----TTSCEEEECCSSSCEEEETT-SCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCTTSE
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEeeccCCcCEEEEEC-CCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCChhhE
Confidence 679999999999982 47888988754 79999999 5789999999999999999999999976667432
Q ss_pred -----------------------------------------------CCCCceeEEEEEEEEeecCCCCCCCHHHHhh
Q 013922 335 -----------------------------------------------HLRGVQAQFTVECRELFYRDLPKLDDSLAGK 365 (434)
Q Consensus 335 -----------------------------------------------~laGk~v~f~V~Ik~Ik~~~lPELdDefak~ 365 (434)
.|||+++.|+|+|.+|+.. -.+|++..
T Consensus 77 ~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~~a----t~eei~~g 150 (171)
T 2k8i_A 77 QRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREA----TEEELAHG 150 (171)
T ss_dssp EEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEEESCCSSCCCEEEEEEEEEEEEEC----CSHHHHHT
T ss_pred EEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEEeccC----CHHHHhcC
Confidence 6999999999999999853 35666543
No 12
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.28 E-value=1.4e-11 Score=104.13 Aligned_cols=87 Identities=17% Similarity=0.252 Sum_probs=76.6
Q ss_pred CC-CCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 259 RG-LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 259 r~-~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
.. ++.||.|+++|.++. .+|+.|+++.. +++.|.+| .+.++|+|+++|.||++|++++|.++++.+|....
T Consensus 19 ~~~~~~gd~V~v~y~~~~-----~dG~~~d~s~~~~~p~~f~lG-~~~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~ 92 (113)
T 1yat_A 19 ATFPKTGDLVTIHYTGTL-----ENGQKFDSSVDRGSPFQCNIG-VGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRG 92 (113)
T ss_dssp SCCCCTTCEEEEEEEEEE-----TTSCEEEESTTTTCCEEEETT-SSSSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTC
T ss_pred cccCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCcEEEEeC-CCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCC
Confidence 44 889999999999983 47888887643 68999999 47899999999999999999999999888998877
Q ss_pred C-----CCceeEEEEEEEEee
Q 013922 336 L-----RGVQAQFTVECRELF 351 (434)
Q Consensus 336 l-----aGk~v~f~V~Ik~Ik 351 (434)
. +|+++.|+|+|++|+
T Consensus 93 ~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 93 FPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp BTTTBCTTCCEEEEEEEEEEC
T ss_pred CCCCcCCCCeEEEEEEEEEeC
Confidence 6 889999999999985
No 13
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.25 E-value=2e-11 Score=102.02 Aligned_cols=85 Identities=14% Similarity=0.237 Sum_probs=75.1
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC--
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL-- 336 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l-- 336 (434)
++.||.|+++|.++. .+|+.|+++.. +++.|.+| .+.++|+|+++|.||++|++++|.++.+.+|.....
T Consensus 16 ~~~gd~V~v~y~~~~-----~dG~~~d~s~~~~~p~~f~lG-~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~ 89 (107)
T 2ppn_A 16 PKRGQTCVVHYTGML-----EDGKKFDSSRDRNKPFKFMLG-KQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPG 89 (107)
T ss_dssp CCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETT-SCCSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEeC-CCChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCCCC
Confidence 889999999999983 47888887643 68999999 468999999999999999999999998888988776
Q ss_pred ---CCceeEEEEEEEEee
Q 013922 337 ---RGVQAQFTVECRELF 351 (434)
Q Consensus 337 ---aGk~v~f~V~Ik~Ik 351 (434)
+|+++.|+|+|++|+
T Consensus 90 ~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 90 IIPPHATLVFDVELLKLE 107 (107)
T ss_dssp TBCTTCCEEEEEEEEEEC
T ss_pred CcCCCCeEEEEEEEEEeC
Confidence 899999999999984
No 14
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.24 E-value=2.4e-11 Score=106.12 Aligned_cols=87 Identities=16% Similarity=0.295 Sum_probs=77.0
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
+++++.||.|+|+|.++. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++||+++|.++++.+|....
T Consensus 40 G~~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~g~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~ 113 (133)
T 2y78_A 40 GAEARAGQTVSVHYTGWL-----TDGQKFDSSKDRNDPFAFVLG-GGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARG 113 (133)
T ss_dssp SCBCCTTSEEEEEEEEEE-----TTSCEEEETTTTTCCEEEETT-SSSSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTC
T ss_pred CCCCCCCCEEEEEEEEEE-----CCCCEEeccCcCCCCEEEEeC-CCChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCC
Confidence 467899999999999983 4788888764 478999999 46899999999999999999999999999999888
Q ss_pred CCC-----ceeEEEEEEEEe
Q 013922 336 LRG-----VQAQFTVECREL 350 (434)
Q Consensus 336 laG-----k~v~f~V~Ik~I 350 (434)
.+| +++.|+|+|.+|
T Consensus 114 ~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 114 AGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp BTTTBCTTCCEEEEEEEEEC
T ss_pred CCCCCCCCCeEEEEEEEEEC
Confidence 877 899999999876
No 15
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.23 E-value=3.6e-11 Score=104.51 Aligned_cols=86 Identities=16% Similarity=0.288 Sum_probs=76.1
Q ss_pred CC-CCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 259 RG-LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 259 r~-~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
.. ++.||.|+|+|.++. .+|+.|+++.. +++.|.+| .+.++|+|+++|.||++||++.|.++++.+|....
T Consensus 37 ~~~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~g~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~ 110 (130)
T 2lgo_A 37 VTKPQAGKKVTVHYDGRF-----PDGKQFDSSRSRGKPFQFTLG-AGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERG 110 (130)
T ss_dssp SCCCCTTSEEEEEEEEEC-----TTSCEEECTTTTTCCEEEETT-STTSCHHHHHHHHHSCTTEEEEEEECTTTSTTTTC
T ss_pred CccCCCCCEEEEEEEEEE-----CCCCEEEccCcCCCCEEEEeC-CCCccHHHHHHHhCCCCCCEEEEEECcHHHCCCCC
Confidence 44 889999999999982 47888888754 68999999 46899999999999999999999999999999887
Q ss_pred C-----CCceeEEEEEEEEe
Q 013922 336 L-----RGVQAQFTVECREL 350 (434)
Q Consensus 336 l-----aGk~v~f~V~Ik~I 350 (434)
+ +|+++.|+|+|++|
T Consensus 111 ~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 111 YPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp CSTTSCSSCCEEEEEEEEEC
T ss_pred CCCCcCCCCeEEEEEEEEEC
Confidence 7 88999999999876
No 16
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.21 E-value=4.3e-11 Score=108.56 Aligned_cols=104 Identities=14% Similarity=0.172 Sum_probs=87.7
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC---
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH--- 335 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~--- 335 (434)
++.||.|+|+|.++. .+|+.|+++.. .++.|.+| .++|||+++|.||++|++++|.++.+.+|+...
T Consensus 53 ~~~gd~V~v~Y~g~l-----~dG~~fdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~~ 124 (167)
T 1jvw_A 53 PAIDDKCEVHYTGRL-----RDGTVFDSSRERGKPTTFRPN---EVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGG 124 (167)
T ss_dssp CCTTCCEEEEEEEEC-----TTSCEEEEHHHHTSCEEECGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCSSS
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEeeccccCCCEEEEeC---chhHHHHHHHcCCCCCCEEEEEECchhhCCCCCCCC
Confidence 788999999999983 47888887643 78888875 599999999999999999999999888898765
Q ss_pred --CCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHH
Q 013922 336 --LRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE 386 (434)
Q Consensus 336 --laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~l~~ 386 (434)
.+|+++.|+|+|.+|++. | ...|.+++++.|++++..
T Consensus 125 ~Ipp~s~LiF~VeL~~i~~~--~------------~~~~~~e~~~~l~k~~~~ 163 (167)
T 1jvw_A 125 MIPPYSPLEFDVELISIKDG--G------------KGRTAEEVDEILRKAEED 163 (167)
T ss_dssp SSCTTCCEEEEEEEEEEGGG--C------------CSCBHHHHHHHHHHHHHC
T ss_pred CcCCCCeEEEEEEEEEEEcC--C------------CCCCHHHHHHHHHHHhhh
Confidence 478999999999999843 1 245789999999988754
No 17
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.18 E-value=1e-10 Score=104.38 Aligned_cols=90 Identities=12% Similarity=0.157 Sum_probs=76.8
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc-ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCC----
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE-TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR---- 332 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~-~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~---- 332 (434)
.++++.||.|+++|+++.. .+|+.|+++. .+++.|.+| .+.++|+|+++|+||++|++++|.++.+.+|+
T Consensus 4 ~~~i~~gd~V~v~Y~g~~~----~dG~~fdss~~~~p~~f~~G-~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 4 HDLESIKQAALIEYEVREQ----GSSIVLDSNISKEPLEFIIG-TNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCCTTSCCEEEEEEEEEES----SCSCEEEESTTTCCEEEETT-CCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred ccCCCCCCEEEEEEEEEEC----CCCCEEEeCCCCcCEEEEEC-CCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 4678999999999999821 2788888775 479999999 57899999999999999999999999666551
Q ss_pred ------------------------------------------------CCCCCCceeEEEEEEEEeec
Q 013922 333 ------------------------------------------------QEHLRGVQAQFTVECRELFY 352 (434)
Q Consensus 333 ------------------------------------------------~~~laGk~v~f~V~Ik~Ik~ 352 (434)
+..|||++++|+|+|.+|..
T Consensus 79 ~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v~v~~v~~ 146 (151)
T 2kr7_A 79 SYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRFKVLGFRE 146 (151)
T ss_dssp CEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEEEEEEEEC
T ss_pred ceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEEEEEEeec
Confidence 66789999999999999974
No 18
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.14 E-value=7.6e-11 Score=105.87 Aligned_cols=84 Identities=14% Similarity=0.279 Sum_probs=72.8
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcc---------------cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEE
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET---------------KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~---------------~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i 325 (434)
++.||.|+|+|+++ .+|+.|+++.. +++.|.+| .+.++|||+++|+||++||+++|.+
T Consensus 2 i~~Gd~V~v~Y~g~------ldG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG-~g~vi~G~eeaL~gm~~Ge~~~v~I 74 (157)
T 3pr9_A 2 VEKGKMVKISYDGY------VDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAG-EGQVLPGLDEAILEMDVGEEREVVL 74 (157)
T ss_dssp CCTTCEEEEEEEEE------ETTEEEEESCHHHHHHHTCCCTTSCCSCEEEETT-SSSSCHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCEEEEEEEEE------ECCEEEEeccccccccccccccccCCCCEEEEEC-CCcHHHHHHHHHcCCCCCCEEEEEE
Confidence 68999999999998 36787876543 68999999 5789999999999999999999999
Q ss_pred cCCCCC-------------------------------------------------CCCCCCCceeEEEEEEEEee
Q 013922 326 AFPESW-------------------------------------------------RQEHLRGVQAQFTVECRELF 351 (434)
Q Consensus 326 ~fPed~-------------------------------------------------~~~~laGk~v~f~V~Ik~Ik 351 (434)
+.+.+| .+..|||++++|+|+|.+|-
T Consensus 75 pp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~v~v~~v~ 149 (157)
T 3pr9_A 75 PPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVV 149 (157)
T ss_dssp CGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEE
T ss_pred CcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecCCCeEEEEEcCCEEEEECCCccCCCeEEEEEEEEEEE
Confidence 977776 26789999999999999885
No 19
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.14 E-value=1.3e-10 Score=105.41 Aligned_cols=88 Identities=16% Similarity=0.255 Sum_probs=75.3
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCC------
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESW------ 331 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~------ 331 (434)
.++.||+|+|+|+++. .+|+.|+++.. +++.|.+| .+.++|+|+++|.||++||+++|.++....|
T Consensus 24 ~i~~gd~V~v~Y~g~l-----~dG~vfDss~~~~~P~~f~lG-~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~~ 97 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKL-----DDGTTAESTRNNGKPALFRLG-DASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPD 97 (169)
T ss_dssp SCCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETT-SSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCGG
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEEC-CCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCChH
Confidence 6899999999999983 47888887643 78999999 5789999999999999999999999855555
Q ss_pred -----------------------------------------------CCCCCCCceeEEEEEEEEeecC
Q 013922 332 -----------------------------------------------RQEHLRGVQAQFTVECRELFYR 353 (434)
Q Consensus 332 -----------------------------------------------~~~~laGk~v~f~V~Ik~Ik~~ 353 (434)
.|..|||+++.|+|+|.+|...
T Consensus 98 lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~vr~A 166 (169)
T 4dt4_A 98 LIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPA 166 (169)
T ss_dssp GEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEESCC
T ss_pred HEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEeeC
Confidence 2568999999999999999743
No 20
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.13 E-value=1.9e-10 Score=97.87 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=74.4
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcc---------cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCC
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAET---------KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPES 330 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~---------~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed 330 (434)
.++.||.|+++|.++. .+|+.|+++.. +++.|.+| .+.++|+|+++|.||++|+++.|.++.+.+
T Consensus 19 ~p~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~~~~~~~~p~~f~lG-~~~~i~G~e~~l~gm~~Ge~~~v~ip~~~a 92 (119)
T 3kz7_A 19 FPKKGDVVHCWYTGTL-----PDGTVFDTNIQTSSKKKKNAKPLSFKVG-VGKVIRGWDEALLTMSKGEKARLEIEPEWA 92 (119)
T ss_dssp CCCTTCEEEEEEEEEC-----TTSCEEEECCCCSSSTTTTCCCEEEETT-SSSSCHHHHHHHTTCCTTCEEEEEECGGGT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEeccccccccccCCCCEEEEEC-CCChhHHHHHHHhCCCCCCEEEEEECcHHh
Confidence 4789999999999983 47888877542 78999999 468999999999999999999999999999
Q ss_pred CCCCCC------CCceeEEEEEEEEe
Q 013922 331 WRQEHL------RGVQAQFTVECREL 350 (434)
Q Consensus 331 ~~~~~l------aGk~v~f~V~Ik~I 350 (434)
|..... ++.++.|+|++.+|
T Consensus 93 YG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 93 YGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp TCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred cCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 987655 78899999999987
No 21
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.13 E-value=1.6e-10 Score=99.37 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=77.0
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc----ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE----TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQ 333 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~----~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~ 333 (434)
.+.++.||.|+|+|.++.. .+|+.|+++. .+++.+.+| .+.++|+|+++|.||++|+++.|.++.+.+|..
T Consensus 26 g~~~~~gd~V~v~Y~g~~~----~dG~~fdss~~~~~~~p~~f~lG-~~~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~ 100 (125)
T 4dip_A 26 HRKTKGGDLMLVHYEGYLE----KDGSLFHSTHKHNNGQPIWFTLG-ILEALKGWDQGLKGMCVGEKRKLIIPPALGYGK 100 (125)
T ss_dssp SCCCCTTCEEEEEEEEEET----TTCCEEEEHHHHTTTCCEEEETT-SCSSCHHHHHHSTTCCTTCEEEEEECGGGTTTT
T ss_pred CCcCCCCCEEEEEEEEEEC----CCCcEEEEcccCCCCcCEEEEeC-CCChhHHHHHHHhCCCCCCEEEEEEChHHhcCC
Confidence 4679999999999999841 2788888763 478999999 468999999999999999999999999999977
Q ss_pred CCC----CCceeEEEEEEEEeec
Q 013922 334 EHL----RGVQAQFTVECRELFY 352 (434)
Q Consensus 334 ~~l----aGk~v~f~V~Ik~Ik~ 352 (434)
... ++.++.|+|++.+|++
T Consensus 101 ~g~~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 101 EGKGKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp TCBTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCCCCCeEEEEEEEEEEEc
Confidence 653 5569999999999974
No 22
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.10 E-value=1.7e-10 Score=99.86 Aligned_cols=87 Identities=14% Similarity=0.172 Sum_probs=76.4
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcC------CCCCceEEEEEcCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISG------IQRGETKSFRLAFPE 329 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG------~k~Ge~~~~~i~fPe 329 (434)
++.++.||.|+|+|.++. .+|+.|+++. .+++.|.+| .+.++|+|+++|+| |++|++++|.++.+.
T Consensus 24 G~~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~~~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~ 97 (129)
T 1u79_A 24 GPEAVKGQLIKAHYVGKL-----ENGKVFDSSYNRGKPLTFRIG-VGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPEL 97 (129)
T ss_dssp SCBCCTTCEEEEEEEEEC-----TTSCEEEEHHHHTSCEEEETT-SSSSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGG
T ss_pred CCCCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEeC-CCCccHHHHHHhcccccccccCCCCEEEEEEChHH
Confidence 456899999999999982 4788888764 478999999 46899999999999 999999999999888
Q ss_pred CCCCCCC----------CCceeEEEEEEEEe
Q 013922 330 SWRQEHL----------RGVQAQFTVECREL 350 (434)
Q Consensus 330 d~~~~~l----------aGk~v~f~V~Ik~I 350 (434)
+|..... +|+++.|+|+|++|
T Consensus 98 aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 98 AYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred ccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9988776 89999999999987
No 23
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=1.5e-10 Score=101.15 Aligned_cols=91 Identities=12% Similarity=0.091 Sum_probs=75.1
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC----
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH---- 335 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~---- 335 (434)
.++.||.|+|+|.++. .+|+.|++ .+++.|.+| .+.++|+|+++|.||++|++++|.++....|....
T Consensus 33 ~~~~gd~V~v~Y~g~~-----~dG~~fds--~~p~~f~lG-~g~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~ 104 (135)
T 2d9f_A 33 RPVKGQVVTVHLQTSL-----ENGTRVQE--EPELVFTLG-DCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP 104 (135)
T ss_dssp CCCTTSEEEEEEEEEE-----SSSCEEEE--EEEEEEETT-SCCSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCSSS
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEec--CCCEEEEeC-CCChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcCCC
Confidence 6889999999999983 46888875 478999999 46899999999999999999999997444565544
Q ss_pred --CCCceeEEEEEEEEeecCCCCCC
Q 013922 336 --LRGVQAQFTVECRELFYRDLPKL 358 (434)
Q Consensus 336 --laGk~v~f~V~Ik~Ik~~~lPEL 358 (434)
.+|+++.|+|+|++|++..-+|+
T Consensus 105 ~Ip~~~~l~f~vel~~v~~~~~~e~ 129 (135)
T 2d9f_A 105 YIPPHAALCLEVTLKTAVDRPDLEM 129 (135)
T ss_dssp CCCTTCCEEEEEEEEEEESSCSSSS
T ss_pred ccCCCCeEEEEEEEEEeecCCchhh
Confidence 46899999999999997655543
No 24
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.09 E-value=2.7e-10 Score=105.77 Aligned_cols=94 Identities=12% Similarity=0.211 Sum_probs=77.5
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcc-cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCC-------
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET-KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR------- 332 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~-~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~------- 332 (434)
+++||+|+|+|+++. .+|+.|+++.. +++.|.+| .+.++|+|+++|+||++|++++|.+++++.|.
T Consensus 3 i~~gd~V~v~Y~g~~-----~dG~~fdss~~~~P~~f~lG-~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~~lV 76 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRT-----EDGVLVDESPVSAPLDYLHG-HGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLV 76 (196)
T ss_dssp CCSSCEEEEEEEEEE-----TTTEEEEECCTTSCCEEESS-SSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCTTTC
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecCCCCCEEEEEC-CCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCChhhE
Confidence 679999999999982 47888887754 79999999 57899999999999999999999999666652
Q ss_pred ---------------------------------------------CCCCCCceeEEEEEEEEeecCCCCCCCHHHHh
Q 013922 333 ---------------------------------------------QEHLRGVQAQFTVECRELFYRDLPKLDDSLAG 364 (434)
Q Consensus 333 ---------------------------------------------~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak 364 (434)
|..|||+++.|+|+|.+|.. .-.+|++.
T Consensus 77 ~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~vr~----at~eei~~ 149 (196)
T 2kfw_A 77 QRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIRE----ATEEELAH 149 (196)
T ss_dssp EEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEEEEECCCBC----CCHHHHHH
T ss_pred EEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEEeec----CCHHHHhc
Confidence 35689999999999999873 33456553
No 25
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.08 E-value=3.6e-10 Score=97.73 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=76.4
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC-
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l- 336 (434)
.++.||.|+|+|+++. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|+++.|.++.+.+|.....
T Consensus 34 ~p~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~ 107 (128)
T 3o5q_A 34 TPMIGDKVYVHYKGKL-----SNGKKFDSSHDRNEPFVFSLG-KGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSL 107 (128)
T ss_dssp CCCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETT-SSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEEC-CCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCC
Confidence 4689999999999983 4788888753 468999999 478999999999999999999999999999988766
Q ss_pred ----CCceeEEEEEEEEeec
Q 013922 337 ----RGVQAQFTVECRELFY 352 (434)
Q Consensus 337 ----aGk~v~f~V~Ik~Ik~ 352 (434)
++.++.|+|++.+|+.
T Consensus 108 ~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 108 PKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp TTBCTTCCEEEEEEEEEEEC
T ss_pred CCcCCCCEEEEEEEEEEecC
Confidence 7899999999999974
No 26
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.08 E-value=1.6e-10 Score=100.77 Aligned_cols=88 Identities=13% Similarity=0.061 Sum_probs=69.7
Q ss_pred CCCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC
Q 013922 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL 336 (434)
Q Consensus 259 r~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l 336 (434)
+.++.||.|+|+|.++.. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|++++|.++....|.....
T Consensus 39 ~~~~~gd~V~v~Y~g~l~----~~G~~fdss~~~~~p~~f~lG-~g~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~ 113 (134)
T 3b7x_A 39 DLVAPDASVLVKYSGYLE----HMDRPFDSNYFRKTPRLMKLG-EDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGC 113 (134)
T ss_dssp EECCTTCEEEEEEEEECT----TCSSCSEEC-------CEEC--CCCCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCB
T ss_pred CCCCCCCEEEEEEEEEEC----CCCeEEEecCCCCCCEEEEcC-CcchhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC
Confidence 457789999999999831 1588888764 468899999 467999999999999999999999976667877666
Q ss_pred -----CCceeEEEEEEEEee
Q 013922 337 -----RGVQAQFTVECRELF 351 (434)
Q Consensus 337 -----aGk~v~f~V~Ik~Ik 351 (434)
+|+++.|+|+|++|+
T Consensus 114 ~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 114 PPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TTTBCTTCCEEEEEEEEEEC
T ss_pred CCCcCcCCeEEEEEEEEEEe
Confidence 789999999999985
No 27
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.07 E-value=3.6e-10 Score=96.26 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=72.0
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC---
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL--- 336 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l--- 336 (434)
.++.||.|+++|.++. .+|+.|++ .+++.|.+| .+.++|+|+++|.||++|+++.|.++....|.....
T Consensus 29 ~~~~gd~V~v~y~g~~-----~dG~~~ds--~~p~~f~lG-~~~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~ 100 (118)
T 2awg_A 29 RPVKGQVVTVHLQTSL-----ENGTRVQE--EPELVFTLG-DCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPY 100 (118)
T ss_dssp CCCTTSEEEEEEEEEC-----TTSCEEEE--EEEEEEETT-SSCSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTTT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEC--CCCEEEEEC-CCChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCCCCc
Confidence 5789999999999982 47888875 478999999 468999999999999999999999976667776553
Q ss_pred --CCceeEEEEEEEEee
Q 013922 337 --RGVQAQFTVECRELF 351 (434)
Q Consensus 337 --aGk~v~f~V~Ik~Ik 351 (434)
+|+++.|+|+|++|+
T Consensus 101 Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 101 IPPHAALCLEVTLKTAV 117 (118)
T ss_dssp BCTTCCEEEEEEEEEEE
T ss_pred cCCCCeEEEEEEEEEec
Confidence 789999999999986
No 28
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.07 E-value=1.2e-10 Score=110.80 Aligned_cols=96 Identities=13% Similarity=0.234 Sum_probs=78.8
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcc---------------cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEE
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET---------------KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~---------------~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i 325 (434)
++.||.|+|+|+++ .+|+.|+++.. +++.|.+| .+.++|||+++|.||++|+++++.+
T Consensus 2 i~~Gd~V~v~Y~g~------ldG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG-~g~vIpG~eeaL~Gm~vGek~~v~I 74 (231)
T 3prb_A 2 VEKGKMVKISYDGY------VDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAG-EGQVLPGLDEAILEMDVGEEREVVL 74 (231)
T ss_dssp CCTTCEEEEEEEEE------ETTEEEEESCHHHHHHTTCCCTTSCCSCEEEETT-SSSSCHHHHHHHHTCCTTCEEEEEE
T ss_pred CCCCCEEEEEEEEE------ECCEEEEeccchhcccccccccccCCCCEEEEeC-CCcHHHHHHHHHcCCCCCCEEEEEe
Confidence 68999999999998 36777776543 68999999 5789999999999999999999999
Q ss_pred cCCCCC-------------------------------------------------CCCCCCCceeEEEEEEEEeecCCCC
Q 013922 326 AFPESW-------------------------------------------------RQEHLRGVQAQFTVECRELFYRDLP 356 (434)
Q Consensus 326 ~fPed~-------------------------------------------------~~~~laGk~v~f~V~Ik~Ik~~~lP 356 (434)
+....| .+..|||++++|+|+|.+|......
T Consensus 75 ppe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat~e 154 (231)
T 3prb_A 75 PPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDKKN 154 (231)
T ss_dssp CGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSHHH
T ss_pred CcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCCHH
Confidence 843333 1568999999999999999877766
Q ss_pred CCCHHHH
Q 013922 357 KLDDSLA 363 (434)
Q Consensus 357 ELdDefa 363 (434)
++.+-+.
T Consensus 155 ei~~~~~ 161 (231)
T 3prb_A 155 IVKEIVK 161 (231)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 29
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.05 E-value=3.8e-10 Score=101.36 Aligned_cols=89 Identities=13% Similarity=0.272 Sum_probs=73.5
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCC--------
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR-------- 332 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~-------- 332 (434)
++.||+|+++|+++ .+|+.|+++. +.|.+| .+.++|+|+++|+||++||+++|.++.+++|+
T Consensus 3 i~~gd~V~v~Y~g~------~dG~~fdss~---~~f~~G-~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~~lv~ 72 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ------VEGEVLDQGE---LSYLHG-HRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQ 72 (158)
T ss_dssp CCTTEEEEEEEEEE------ETTEEEEEEE---EEEETT-SSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCGGGEE
T ss_pred CCCCCEEEEEEEEE------ECCEEEEeeE---EEEEEC-CCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCcceEE
Confidence 67899999999998 4688887654 889999 57899999999999999999999998555541
Q ss_pred ---------------------------------------------CCCCCCceeEEEEEEEEeecCCCCCCCHHHH
Q 013922 333 ---------------------------------------------QEHLRGVQAQFTVECRELFYRDLPKLDDSLA 363 (434)
Q Consensus 333 ---------------------------------------------~~~laGk~v~f~V~Ik~Ik~~~lPELdDefa 363 (434)
+..|||+++.|+|+|.+|.. .-.+|++
T Consensus 73 ~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAGk~L~F~vev~~v~~----at~eei~ 144 (158)
T 3cgm_A 73 VVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVRE----ATPEELL 144 (158)
T ss_dssp EEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEEE----CCHHHHH
T ss_pred EEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccCCEEEEEEEEEEeec----CCHHHHh
Confidence 45689999999999999983 3345554
No 30
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.05 E-value=6.2e-10 Score=98.31 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=76.1
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC-
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l- 336 (434)
.++.||.|+|+|+++. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|+++.|.++.+.+|+....
T Consensus 50 ~p~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~g~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~ 123 (144)
T 3o5e_A 50 TPMIGDKVYVHYKGKL-----SNGKKFDSSHDRNEPFVFSLG-KGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSL 123 (144)
T ss_dssp CCCTTCEEEEEEEEEC-----TTSCEEEESGGGTSCEEEETT-SSSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEeecccCCCeEEEeC-CCcccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCCC
Confidence 4689999999999983 4788888763 367999999 468999999999999999999999999899988766
Q ss_pred ----CCceeEEEEEEEEeec
Q 013922 337 ----RGVQAQFTVECRELFY 352 (434)
Q Consensus 337 ----aGk~v~f~V~Ik~Ik~ 352 (434)
++.++.|+|++++|+.
T Consensus 124 ~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 124 PKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp TTBCTTCCEEEEEEEEEEEC
T ss_pred CCcCCCCeEEEEEEEEEecC
Confidence 6899999999999873
No 31
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.02 E-value=2.1e-10 Score=102.30 Aligned_cols=65 Identities=12% Similarity=0.257 Sum_probs=56.1
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCc---------------ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEE
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE---------------TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~---------------~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i 325 (434)
++.||+|+++|+++. .+|+.|+++. .+++.|.+| .+.++|+|+++|+||++|++++|.+
T Consensus 2 i~~gd~V~v~Y~g~~-----~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G-~g~vi~G~eeaL~gm~~Ge~~~v~i 75 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKL-----ESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVG-EGQLIQGFEEAVLDMEVGDEKTVKI 75 (151)
T ss_dssp CCTTCEEEECCEECC-----TTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETT-TTCSCHHHHHHHHTCCTTCCCEEEE
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecchhhcccccccccccCCCCEEEEEC-CCChhHHHHHHHcCCCCCCEEEEEE
Confidence 678999999999982 4788888763 268999999 5789999999999999999999999
Q ss_pred cCCCCC
Q 013922 326 AFPESW 331 (434)
Q Consensus 326 ~fPed~ 331 (434)
+.+.+|
T Consensus 76 pp~~aY 81 (151)
T 1ix5_A 76 PAEKAY 81 (151)
T ss_dssp CTTTSS
T ss_pred CcHHHC
Confidence 977666
No 32
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=98.99 E-value=1e-09 Score=100.59 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=75.9
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCC--cccCEEEEecCCC-CCCccHHHHhcCCCCCceEEEEEcCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDA--ETKGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQE 334 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~--~~~~~~l~lg~~~-~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~ 334 (434)
++.++.||.|+|+|.++.. .+|+.|+++ ...++.|.+| .+ .++|||+++|.||++|+++.|.++....|+..
T Consensus 61 G~~~~~Gd~V~v~Y~g~l~----~dG~~fdss~~~~~p~~f~lG-~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~ 135 (180)
T 2f4e_A 61 GSKPSKYSTCFLHYRAWTK----NSQHKFEDTWHEQQPIELVLG-KEKKELAGLAIGVASMKSGERALVHVGWELAYGKE 135 (180)
T ss_dssp SCCBCTTCEEEEEEEEEET----TTCCEEEETTTTTCCEEEETT-SCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTT
T ss_pred CCCCCCCCEEEEEEEEEEC----CCCcEEeccCccCCCEEEEeC-CCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcC
Confidence 4568899999999999832 258888876 3478999999 46 79999999999999999999999765567655
Q ss_pred C-------CCCceeEEEEEEEEeecCC
Q 013922 335 H-------LRGVQAQFTVECRELFYRD 354 (434)
Q Consensus 335 ~-------laGk~v~f~V~Ik~Ik~~~ 354 (434)
. .+|.++.|+|+|++|+...
T Consensus 136 g~~~~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 136 GNFSFPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp CBSSSSCBCTTCCEEEEEEEEEESCBC
T ss_pred CcccCCCcCCCCeEEEEEEEEEEecCc
Confidence 4 4789999999999998644
No 33
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=98.96 E-value=2e-09 Score=96.53 Aligned_cols=87 Identities=11% Similarity=0.091 Sum_probs=73.9
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC---
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL--- 336 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l--- 336 (434)
.++.||.|+|+|.++. .+|+.|++ .+++.|.+| .+.++|||+++|.||++|++++|.++....|....+
T Consensus 59 ~p~~gd~V~v~Y~g~l-----~dG~~fds--~~p~~f~lG-~g~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~ 130 (157)
T 2jwx_A 59 RPVKGQVVTVHLQTSL-----ENGTRVQE--EPELVFTLG-DCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP 130 (157)
T ss_dssp CCCTTEEEEEEEEEEC-----TTSCEEEE--EEEEEEETT-TTSSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSS
T ss_pred CCCCCCEEEEEEEEEE-----CCCCEeec--CCCEEEEeC-CCChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCC
Confidence 5789999999999983 47888876 478999999 468999999999999999999999976566776652
Q ss_pred ---CCceeEEEEEEEEeecCC
Q 013922 337 ---RGVQAQFTVECRELFYRD 354 (434)
Q Consensus 337 ---aGk~v~f~V~Ik~Ik~~~ 354 (434)
+|.++.|+|+|.+|+..+
T Consensus 131 ~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 131 YIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp CCCTTCCEEEEEEEEEEEECS
T ss_pred CcCCCCeEEEEEEEEEEEccc
Confidence 568999999999998754
No 34
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=98.95 E-value=1.9e-09 Score=102.06 Aligned_cols=86 Identities=15% Similarity=0.287 Sum_probs=75.1
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
++.++.||.|+|+|.++. .+|+.|+++.. .++.|.+| .++|||+++|.||++|++++|.++.+.+|+...
T Consensus 133 G~~p~~gD~V~V~Y~g~l-----~dG~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g 204 (224)
T 1q6h_A 133 GEAPKDSDTVVVNYKGTL-----IDGKEFDNSYTRGEPLSFRLD---GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG 204 (224)
T ss_dssp SCCCCTTCEEEEEEEEEE-----TTSCEEEEGGGGTSCEEEEGG---GSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTC
T ss_pred CccccCCCEEEEEEEEEe-----CCCCEEeeccccCCCEEEEcC---CcchhHHHHHcCCCCCCEEEEEECchhhcCcCC
Confidence 456789999999999983 47888887643 68888885 599999999999999999999999888998887
Q ss_pred C----CCceeEEEEEEEEee
Q 013922 336 L----RGVQAQFTVECRELF 351 (434)
Q Consensus 336 l----aGk~v~f~V~Ik~Ik 351 (434)
. +|.++.|+|+|.+|+
T Consensus 205 ~~~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 205 VPGIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp BTTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCCCCEEEEEEEEEEeC
Confidence 7 899999999999984
No 35
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=98.94 E-value=2.2e-09 Score=100.96 Aligned_cols=87 Identities=13% Similarity=0.160 Sum_probs=75.0
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
++.++.||.|+|+|.++. .+|+.|+++.. .++.|.+| .++|||+++|.||++|++++|.++.+.+|+...
T Consensus 118 G~~p~~gD~V~V~Y~g~l-----~dG~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g 189 (213)
T 1fd9_A 118 GVKPGKSDTVTVEYTGRL-----IDGTVFDSTEKTGKPATFQVS---QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRS 189 (213)
T ss_dssp SCCCCTTCEEEEEEEEEE-----TTSCEEEEHHHHCSCEEEEGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTCC
T ss_pred CccCCCCCEEEEEEEEEE-----CCCCEEeeccccCCCEEEEcC---chhhHHHHHHcCCCCCCEEEEEECchhccCccC
Confidence 456789999999999983 47888887643 68889885 599999999999999999999999888898765
Q ss_pred C-----CCceeEEEEEEEEeec
Q 013922 336 L-----RGVQAQFTVECRELFY 352 (434)
Q Consensus 336 l-----aGk~v~f~V~Ik~Ik~ 352 (434)
. +|.++.|+|+|.+|++
T Consensus 190 ~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 190 VGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp CSSSCCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCCCCeEEEEEEEEEEEc
Confidence 4 8899999999999975
No 36
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=98.92 E-value=3.3e-09 Score=99.48 Aligned_cols=87 Identities=15% Similarity=0.271 Sum_probs=75.6
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
...++.||.|+++|.++. .+|+.|+++. .+++.|.+| .+.++|||+++|.||++|++++|.++.+.+|+...
T Consensus 116 G~~~~~gd~V~v~Y~g~l-----~dG~~fdss~~~~~P~~f~lG-~g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g 189 (209)
T 3uf8_A 116 GAEARAGQTVSVHYTGWL-----TDGQKFDSSKDRNDPFAFVLG-GGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARG 189 (209)
T ss_dssp SCBCCTTCEEEEEEEEEE-----TTSCEEEESGGGTCCEEEETT-SSSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTC
T ss_pred CCcCCCCCEEEEEEEEEE-----CCCCEEEEccccCCCEEEEeC-CCccchhHHHHHhCCCCCCEEEEEECcHHhCCCCC
Confidence 345889999999999983 4788888763 368999999 46799999999999999999999999988998776
Q ss_pred C-----CCceeEEEEEEEEe
Q 013922 336 L-----RGVQAQFTVECREL 350 (434)
Q Consensus 336 l-----aGk~v~f~V~Ik~I 350 (434)
. ++.++.|+|++.+|
T Consensus 190 ~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 190 AAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp BTTTBCTTCCEEEEEEEEEC
T ss_pred CCCCcCCCCeEEEEEEEEEC
Confidence 5 77899999999886
No 37
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.90 E-value=3.6e-09 Score=106.69 Aligned_cols=88 Identities=14% Similarity=0.230 Sum_probs=77.5
Q ss_pred CCCCcCcEEEEEEEEEeeccCCCCCcccCCCc---ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC
Q 013922 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAE---TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (434)
Q Consensus 259 r~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~---~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~ 335 (434)
+.++.||.|+|+|.++. .+|+.|+++. .+++.|.+| .+.++|||+++|.||++||+++|.++++.+|+...
T Consensus 258 ~~~~~gd~V~v~y~g~l-----~dG~~fd~~~~~~~~p~~f~~G-~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~ 331 (356)
T 3jxv_A 258 ERPNEGAVVTVKITGKL-----QDGTVFLKKGHDEQEPFEFKTD-EEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTE 331 (356)
T ss_dssp CCCCTTCEEEEEEEEEE-----SSSCEEEEESCTTSCCCEEETT-TTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSC
T ss_pred CCCCCCCEEEEEEEEEE-----CCCCEEeeccccCCcCEEEEEC-CCccchHHHHHHhCCCCCCEEEEEEChHHccCCCC
Confidence 56899999999999983 4788887653 578999999 57899999999999999999999999999998765
Q ss_pred -------CCCceeEEEEEEEEeec
Q 013922 336 -------LRGVQAQFTVECRELFY 352 (434)
Q Consensus 336 -------laGk~v~f~V~Ik~Ik~ 352 (434)
.+++++.|+|++++|++
T Consensus 332 ~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 332 SKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EESSSEECTTCCEEEEEEEEEEEC
T ss_pred cCCCCcCCcCCeEEEEEEEEEEEc
Confidence 58999999999999974
No 38
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=98.85 E-value=8.6e-09 Score=97.21 Aligned_cols=85 Identities=11% Similarity=0.140 Sum_probs=75.3
Q ss_pred CCCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCCCC
Q 013922 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRG 338 (434)
Q Consensus 259 r~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laG 338 (434)
..++.||.|+|+|.++. .+|+.|+++ ..++.|.+| .++|||+++|.||++|++++|.++.+..|+.....+
T Consensus 130 ~~p~~gd~V~V~Y~g~l-----~dG~vfDss-~~P~~f~lG---~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~~~ 200 (219)
T 3oe2_A 130 PKPDANGRVEVRYVGRL-----PDGKIFDQS-TQPQWFRLD---SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGD 200 (219)
T ss_dssp CCCCTTSEEEEEEEEEC-----TTSCEEEEC-SSCEEEEGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred ccCCCCCEEEEEEEEEE-----CCCCEeecc-CCcEEEEec---chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCCCC
Confidence 45889999999999983 478888877 788999987 589999999999999999999999888998877666
Q ss_pred -----ceeEEEEEEEEeec
Q 013922 339 -----VQAQFTVECRELFY 352 (434)
Q Consensus 339 -----k~v~f~V~Ik~Ik~ 352 (434)
.++.|+|++.+|++
T Consensus 201 ~IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 201 LIDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp TBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCeEEEEEEEEEEeC
Confidence 89999999999974
No 39
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.84 E-value=4.9e-09 Score=102.48 Aligned_cols=85 Identities=11% Similarity=0.191 Sum_probs=70.0
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCCC---CCccHHHHhcCCCCCceEEEEEcCCCCCCCC--
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDK---VLPGFLDSISGIQRGETKSFRLAFPESWRQE-- 334 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~~---~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~-- 334 (434)
.++.||.|+|+|.++ .+|+.|++ .++.|.+|. +. ++|||+++|+||++||+++|.++-.-.|...
T Consensus 183 ~~~~gd~V~i~y~g~------~dG~~fd~---~~~~f~lG~-g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~ 252 (280)
T 1q1c_A 183 KPNEGAIVEVALEGY------YKDKLFDQ---RELRFEIGE-GENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGK 252 (280)
T ss_dssp CCCTTCEEEEEEEEE------ETTEEEEE---EEEEEETTC-GGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB
T ss_pred cccCCceEEEEEEEE------eCCEEEec---CCeEEEecC-CcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCC
Confidence 578999999999998 46888875 579999994 55 5999999999999999999998522245544
Q ss_pred -CC---CCceeEEEEEEEEeecCC
Q 013922 335 -HL---RGVQAQFTVECRELFYRD 354 (434)
Q Consensus 335 -~l---aGk~v~f~V~Ik~Ik~~~ 354 (434)
.+ +|+++.|+|+|++|++..
T Consensus 253 ~~~~IP~~~~l~f~V~L~~i~~~~ 276 (280)
T 1q1c_A 253 EKFQIPPNAELKYELHLKSFEKAK 276 (280)
T ss_dssp GGGTBCTTCCEEEEEEEEEEECCC
T ss_pred ccCccCCCCeEEEEEEEEEEeCCC
Confidence 35 899999999999998643
No 40
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.81 E-value=6e-09 Score=103.27 Aligned_cols=90 Identities=13% Similarity=0.140 Sum_probs=77.4
Q ss_pred CCCCCcCcEEEEEEEEEeeccCCCCCcccCCC--cccCEEEEecCCC-CCCccHHHHhcCCCCCceEEEEEcCCCCCCCC
Q 013922 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDA--ETKGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQE 334 (434)
Q Consensus 258 dr~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~--~~~~~~l~lg~~~-~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~ 334 (434)
+..++.||.|+|+|.++.. .+|+.|+++ ..+++.|.+|. + .++|||+++|.||++||++.|.++++.+|+..
T Consensus 61 g~~~~~gd~v~v~y~g~~~----~~g~~fd~~~~~~~~~~~~lg~-~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~ 135 (338)
T 2if4_A 61 GSKPSKYSTCFLHYRAWTK----NSQHKFEDTWHEQQPIELVLGK-EKKELAGLAIGVASMKSGERALVHVGWELAYGKE 135 (338)
T ss_dssp SCCCCTTCEEEEEEEEEET----TTCCCCEEHHHHTCCEEEETTS-CCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSS
T ss_pred CCCCCCCCEEEEEEEEEEc----CCCcEeecccCCCCCeEEEcCC-CCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCC
Confidence 3467899999999999832 248888875 45789999994 5 79999999999999999999999999999877
Q ss_pred CC-------CCceeEEEEEEEEeec
Q 013922 335 HL-------RGVQAQFTVECRELFY 352 (434)
Q Consensus 335 ~l-------aGk~v~f~V~Ik~Ik~ 352 (434)
.. .+.++.|.|++.++..
T Consensus 136 ~~~~~~~ip~~~~l~f~v~L~~~~~ 160 (338)
T 2if4_A 136 GNFSFPNVPPMADLLYEVEVIGFDE 160 (338)
T ss_dssp CCCSSSCCCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCCCCCCCcEEEEEEEEEecC
Confidence 65 7899999999999986
No 41
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.81 E-value=1.4e-08 Score=99.24 Aligned_cols=90 Identities=18% Similarity=0.170 Sum_probs=77.6
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC---
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH--- 335 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~--- 335 (434)
++.||.|+|+|.++. .+|+.|+++. .+++.|.+| .+.++|+|+++|.||++|++++|.++.+.+|....
T Consensus 67 ~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG-~g~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~~ 140 (280)
T 1q1c_A 67 PMIGDRVFVHYTGWL-----LDGTKFDSSLDRKDKFSFDLG-KGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP 140 (280)
T ss_dssp CCTTCEEEEEEEEEE-----TTSCEEEESTTSSSCEEEETT-TTSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecccCCCCEEEEEC-CcChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCccC
Confidence 789999999999983 4788888764 378999999 47899999999999999999999998777887655
Q ss_pred --CCCceeEEEEEEEEeecCCCC
Q 013922 336 --LRGVQAQFTVECRELFYRDLP 356 (434)
Q Consensus 336 --laGk~v~f~V~Ik~Ik~~~lP 356 (434)
.++.++.|+|++.+|+...+.
T Consensus 141 ~Ip~~~~lvf~Vel~~i~~~~~~ 163 (280)
T 1q1c_A 141 KIPPNATLVFEVELFEFKGEDLT 163 (280)
T ss_dssp TBCTTCCEEEEEEEEEEECEECC
T ss_pred CCCCCCcEEEEEEeeeecccccc
Confidence 689999999999999876544
No 42
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.78 E-value=7.7e-09 Score=106.77 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=75.7
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC--
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL-- 336 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l-- 336 (434)
++.||.|+|+|+++. .+|+.|+++. .+++.|.+| .+.++|||+++|.||++|++++|.++.+..|+....
T Consensus 47 ~~~gd~v~v~y~~~~-----~~g~~~dss~~~~~p~~~~~g-~~~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~ 120 (457)
T 1kt0_A 47 PMIGDKVYVHYKGKL-----SNGKKFDSSHDRNEPFVFSLG-KGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLP 120 (457)
T ss_dssp CCBTCEEEEEEEEEC----------CBC------CEEEETT-STTSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEeccCCCCCCeEEEeC-CcchhhHHHHHHhhCCCCCEEEEEEChHHhccccCCCC
Confidence 789999999999983 3788888753 368999999 478999999999999999999999998888986553
Q ss_pred ---CCceeEEEEEEEEeecCCCCCCCHHHHhh
Q 013922 337 ---RGVQAQFTVECRELFYRDLPKLDDSLAGK 365 (434)
Q Consensus 337 ---aGk~v~f~V~Ik~Ik~~~lPELdDefak~ 365 (434)
+|.++.|+|++.+|+...++ .|..++++
T Consensus 121 ~i~~~~~l~~~v~l~~~~~~~~~-~dg~~~k~ 151 (457)
T 1kt0_A 121 KIPSNATLFFEIELLDFKGEDLF-EDGGIIRR 151 (457)
T ss_dssp TBCTTCCEEEEEEEEEEECEETT-SSSSEEEE
T ss_pred CCCCCCcEEEEEeeceeeccccc-CCcceEEE
Confidence 88999999999999876554 34444444
No 43
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.55 E-value=3.7e-09 Score=106.55 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=12.2
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcc--cCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCCC
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLR 337 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~--~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~la 337 (434)
.++.||.|+++|.++. .+|+.|+++.. +++.|.+| .+.++|+|+++|.||++|+++.|.++.+.+|+....+
T Consensus 26 ~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~~~lG-~g~~i~g~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~ 99 (356)
T 3jxv_A 26 TPEVGDEVEVHYTGTL-----LDGKKFDSSRDRDDTFKFKLG-QGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSP 99 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEEcccCCCcEEEEeC-CCccchHHHHHHhcCCCCCEEEEEEChHHhCCCCCCC
Confidence 4789999999999973 47888887643 68999999 4689999999999999999999999999999887766
Q ss_pred -----CceeEEEEEEEEeecCCCCCCCHHHHhhhC
Q 013922 338 -----GVQAQFTVECRELFYRDLPKLDDSLAGKLL 367 (434)
Q Consensus 338 -----Gk~v~f~V~Ik~Ik~~~lPELdDefak~l~ 367 (434)
+.++.|+|++.+++...-...|+.+++++.
T Consensus 100 ~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~ 134 (356)
T 3jxv_A 100 PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKIL 134 (356)
T ss_dssp ------------------CCEEETTSSSSEEEEEE
T ss_pred CCcCCCCEEEEEeeEEeeecccccccCceeEEEEE
Confidence 889999999999987666667788887763
No 44
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.51 E-value=1.8e-07 Score=84.42 Aligned_cols=62 Identities=18% Similarity=0.183 Sum_probs=53.6
Q ss_pred CCcCcEEEEEEEEEeeccCCCCCcccCCCc--ccCEEEEecCCCCCCccHHHHhcCCCCCceEEEEEc
Q 013922 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLA 326 (434)
Q Consensus 261 ~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~--~~~~~l~lg~~~~~~p~fe~~LiG~k~Ge~~~~~i~ 326 (434)
++.||.|+++|.++..| .+|+.|+++. .+++.|.+| .+.++|||+++|.||++|+++.|.++
T Consensus 27 ~~~G~~V~vhY~g~l~d---~~G~~FDsS~~rg~P~~f~lG-~g~vI~Gwd~gl~~M~~Ge~~~~~ip 90 (165)
T 2lkn_A 27 FQDGTKATFHYRTLHSD---DEGTVLDDSRARGKPMELIIG-KKFKLPVWETIVCTMREGEIAQFLCD 90 (165)
T ss_dssp CCTTCEEEEECEEECSS---SSCCEEEESTTTTCCEEEESS-SSCSCSHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCCEEEEEEEEEEeC---CCccEEEecccCCCCEEEEec-CCCccHHHHHHHhcCccCceEEEEEC
Confidence 57899999999998543 3688888764 378999999 47899999999999999999999997
No 45
>1zxj_A MPN555, hypothetical protein Mg377 homolog; mostly alpha helical protein, TRI-lobal structure, structural genomics, PSI; 2.80A {Mycoplasma pneumoniae}
Probab=98.04 E-value=8.1e-07 Score=83.48 Aligned_cols=65 Identities=12% Similarity=0.248 Sum_probs=56.8
Q ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHh-cc
Q 013922 365 KLLPGCTTIEQVKETLLQKCREVEQTAK---------DQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQ-MQ 433 (434)
Q Consensus 365 ~l~~~~~Tleelr~~Ike~l~~~~~~~~---------~~~~~~~ll~~L~e~~~~dlPeslv~~e~~~~~~~~l~~-lq 433 (434)
+++++++|+++||+.||++|.++.+.+. +..++++++++|++.++|+||++ +++++++++..+ |+
T Consensus 50 ~~~~~~etleeLKe~Irk~le~e~e~~~~~~~~~~~~~~~~k~~vld~Lve~~e~evPea----Ev~~l~~q~~q~~l~ 124 (218)
T 1zxj_A 50 RIFADPAFIEQHRQRILASFKDAKESALYHELTHIVIKDNLFSCAMNAIVGYFEFNIDEA----ELKNVMEGLKRDVIQ 124 (218)
T ss_dssp CSCCCHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEECCHH----HHHHHHHHHHHC---
T ss_pred EeeCCcccHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhCCCCCCHH----HHHHHHHHHHHHHHh
Confidence 4567889999999999999999966555 88999999999999999999999 889999988877 64
No 46
>2nsa_A Trigger factor, TF; chaperone; 1.70A {Thermotoga maritima}
Probab=97.58 E-value=1e-05 Score=72.70 Aligned_cols=61 Identities=21% Similarity=0.368 Sum_probs=54.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhcc
Q 013922 369 GCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQ 433 (434)
Q Consensus 369 ~~~Tleelr~~Ike~l~~~~~~~~~~~~~~~ll~~L~e~~~~dlPeslv~~e~~~~~~~~l~~lq 433 (434)
+++|+++||+.||++|.++++.+++..++++++++|++.++|+ ||+++++++++++..+|+
T Consensus 2 e~~tleelk~~ir~~l~~~~~~~~~~~~~~~vld~l~e~~~~~----lve~e~~~~~~~~~~~l~ 62 (170)
T 2nsa_A 2 EFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVEIE----ISDRTLEILVNEAINRLK 62 (170)
T ss_dssp CCCSHHHHHHHTCCBGGGGCCTTHHHHHHHHHHHHGGGGCCCC----CCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch----HHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999998 777888888777766653
No 47
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=95.74 E-value=0.026 Score=55.04 Aligned_cols=84 Identities=12% Similarity=0.189 Sum_probs=62.5
Q ss_pred CCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCCC--CCCccHHHHhcCCCCCceEEEEEcCCCCCCCCC--
Q 013922 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGD--KVLPGFLDSISGIQRGETKSFRLAFPESWRQEH-- 335 (434)
Q Consensus 260 ~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~~--~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~-- 335 (434)
....||.|+|+|.++ .+|..|+.. ++.|.+|.+. .++++++.+|.+|++|+...+.+.--..|....
T Consensus 40 ~p~~~~~v~v~y~g~------~~g~~fd~~---~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~ 110 (336)
T 1p5q_A 40 KPNEGAIVEVALEGY------YKDKLFDQR---ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKE 110 (336)
T ss_dssp CCCTTCEEEEEEEEE------ETTEEEEEE---EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBG
T ss_pred CCCCCCeEEEEEEEE------ECCEEEecC---CeEEEeCCCCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCC
Confidence 367899999999998 357777643 6889998432 258899999999999999999996322443322
Q ss_pred ----CCCceeEEEEEEEEeec
Q 013922 336 ----LRGVQAQFTVECRELFY 352 (434)
Q Consensus 336 ----laGk~v~f~V~Ik~Ik~ 352 (434)
..+....|.+.+.++.+
T Consensus 111 ~~~i~~~~~l~f~~~L~~~~~ 131 (336)
T 1p5q_A 111 KFQIPPNAELKYELHLKSFEK 131 (336)
T ss_dssp GGTBCSSCCEEEEEEEEEEEC
T ss_pred ccCCCCCCeEEEEEEEeeccc
Confidence 23356789899888875
No 48
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=91.35 E-value=0.39 Score=48.78 Aligned_cols=85 Identities=11% Similarity=0.137 Sum_probs=61.6
Q ss_pred CCCCcCcEEEEEEEEEeeccCCCCCcccCCCcccCEEEEecCC--CCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCC
Q 013922 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDG--DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL 336 (434)
Q Consensus 259 r~~q~GD~V~vd~~~~~~~~d~~~G~~i~~~~~~~~~l~lg~~--~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~l 336 (434)
+....||.|+++|+++ .+|..|+. .++.|.+|.+ ..++++++.++.+|+.|+...+.+.---.|.....
T Consensus 160 ~~p~~g~~V~v~y~g~------~~g~~f~~---~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~ 230 (457)
T 1kt0_A 160 SNPNEGATVEIHLEGR------CGGRMFDC---RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGK 230 (457)
T ss_dssp CCCCTTCEEEEEEEEE------ETTEEEEE---EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCB
T ss_pred CCCCCCCEEEEEEEEE------eCCeEEec---CceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCC
Confidence 3467899999999998 35666653 4688888842 13788999999999999999999863224443322
Q ss_pred ------CCceeEEEEEEEEeec
Q 013922 337 ------RGVQAQFTVECRELFY 352 (434)
Q Consensus 337 ------aGk~v~f~V~Ik~Ik~ 352 (434)
.+..+.|.+.+....+
T Consensus 231 ~~~~ip~~~~l~y~~~l~~~~~ 252 (457)
T 1kt0_A 231 PKFGIEPNAELIYEVTLKSFEK 252 (457)
T ss_dssp GGGTBCTTCCEEEEEEEEEEEC
T ss_pred cccCCCCCCEEEEEhhhhhccc
Confidence 2345688888887765
No 49
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=80.29 E-value=10 Score=32.93 Aligned_cols=33 Identities=12% Similarity=0.199 Sum_probs=25.3
Q ss_pred ccHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEee
Q 013922 306 PGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELF 351 (434)
Q Consensus 306 p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik 351 (434)
-.+-.+|+|+++||++++..+ . | ..+++|.+|.
T Consensus 123 SPlG~ALlGk~~GD~v~~~~p--~--------G---~~~~~I~~I~ 155 (156)
T 2f23_A 123 SPMGKALLGHRVGDVLSLDTP--K--------G---KREFRVVAIH 155 (156)
T ss_dssp SHHHHHHTTCCTTCEEEEEET--T--------E---EEEEEEEEEE
T ss_pred CHHHHHHcCCCCCCEEEEEcC--C--------C---cEEEEEEEEE
Confidence 357899999999999988884 2 3 2466778875
No 50
>1te7_A Hypothetical UPF0267 protein YQFB; alpha + beta, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: b.122.1.7
Probab=78.64 E-value=7.9 Score=31.35 Aligned_cols=40 Identities=18% Similarity=0.144 Sum_probs=34.3
Q ss_pred eEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHH
Q 013922 341 AQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQK 383 (434)
Q Consensus 341 v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~ 383 (434)
..+.++|.+|....+-+++|++|..= |+ |++++|+.+++-
T Consensus 49 ~~~~i~vt~V~~~~~~eitee~A~~E--G~-sl~~~~~~~~~i 88 (103)
T 1te7_A 49 YFCTIEVTATSTVTLDTLTEKHAEQE--NM-TLTELKKVIADI 88 (103)
T ss_dssp EEEEEEEEEEEEECSTTTSTHHHHHT--TS-CHHHHHHHHHHH
T ss_pred EEEEEEEEEEEEEcHHHhCHHHHHHc--CC-CHHHHHHHHHHH
Confidence 45788999999999999999999865 56 999999988763
No 51
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=64.20 E-value=21 Score=31.06 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=21.2
Q ss_pred cHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEee
Q 013922 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELF 351 (434)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik 351 (434)
.+..+|+|+++||++++.+ |. |. .+++|.+|.
T Consensus 125 PlG~ALlGk~~GD~v~v~~--p~--------G~---~~~~I~~I~ 156 (158)
T 1grj_A 125 PIARGLIGKEEDDVVVIKT--PG--------GE---VEFEVIKVE 156 (158)
T ss_dssp HHHHHHTTCBTTCEECC-------------------CCEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------Cc---EEEEEEEEE
Confidence 5789999999999988776 32 42 356677776
No 52
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=59.43 E-value=10 Score=32.26 Aligned_cols=34 Identities=29% Similarity=0.489 Sum_probs=26.7
Q ss_pred cHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEeec
Q 013922 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFY 352 (434)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~ 352 (434)
.+..+|+|+++||++++.+ |. |+ ..+++|.+|..
T Consensus 93 PlG~ALlGk~~GD~v~v~~--p~--------G~--~~~~~I~~I~~ 126 (136)
T 3bmb_A 93 PVGAALLGLRVGDSIHWEL--PG--------GV--ATHLEVLELEY 126 (136)
T ss_dssp HHHHHHTTCBTTCEEEEEE--TT--------TE--EEEEEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------CC--EEEEEEEEEEe
Confidence 5789999999999999887 33 43 35677788874
No 53
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=55.49 E-value=12 Score=32.69 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=26.2
Q ss_pred cHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEeec
Q 013922 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFY 352 (434)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~ 352 (434)
.+..+|+|+++||++++.+ |. | ..+++|.+|..
T Consensus 123 Plg~ALlGk~vGD~v~v~~--P~--------G---~~~~~I~~I~~ 155 (158)
T 2p4v_A 123 PMARALLKKEVGDLAVVNT--PA--------G---EASWYVNAIEY 155 (158)
T ss_dssp HHHHHSTTCCTTCEEEEEC--SS--------C---EEEEEEEEEEC
T ss_pred HHHHHhcCCCCCCEEEEEc--CC--------C---cEEEEEEEEEe
Confidence 5889999999999988877 43 4 25778888874
No 54
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=54.26 E-value=29 Score=31.86 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=53.1
Q ss_pred CCCCccHHHHhcCCCCCceEE--EEEcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHH
Q 013922 302 DKVLPGFLDSISGIQRGETKS--FRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKET 379 (434)
Q Consensus 302 ~~~~p~fe~~LiG~k~Ge~~~--~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~ 379 (434)
+.+.|.|.+++-++++|+... +...+ | -.-|.|.++.... ..+.++.|..
T Consensus 171 ~~l~~~f~~a~~~l~~G~is~~pv~t~~----------G---~hii~v~~~~~~~---------------~~~~e~vk~~ 222 (252)
T 3rfw_A 171 STMVKPFTDAAFALKNGTITTTPVKTNF----------G---YHVILKENSQAKG---------------QIKFDEVKQG 222 (252)
T ss_dssp SSSCHHHHHHHHHSCTTEECSSCEEETT----------E---EEEEEEEEEECCE---------------ECCHHHHHHH
T ss_pred ccccHHHHHHHHcCCCCCccCceEEECC----------E---EEEEEEEEecCCC---------------CCCHHHHHHH
Confidence 468899999999999998652 44432 1 2334556654221 2357888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 013922 380 LLQKCREVEQTAKDQATDNAILDQLYKMVEIDI 412 (434)
Q Consensus 380 Ike~l~~~~~~~~~~~~~~~ll~~L~e~~~~dl 412 (434)
|+..|..+...+ ...+.++.|.+...+++
T Consensus 223 I~~~L~~~k~~~----~~~~~~~~Lr~~a~I~i 251 (252)
T 3rfw_A 223 IENGLKFEEFKK----VINQKGQDLLNSAKVEY 251 (252)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHhhCeeee
Confidence 888887765443 45667788888877765
No 55
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=53.04 E-value=12 Score=32.01 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=26.4
Q ss_pred cHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEeec
Q 013922 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFY 352 (434)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~ 352 (434)
.+-.+|+|+++||++++.+ |. |+. .+++|.+|..
T Consensus 96 PlG~ALlGk~vGD~v~v~~--P~--------G~~--~~~~I~~I~~ 129 (141)
T 2pn0_A 96 PVGSALLGLAQGDEIEWPK--PG--------GGV--LRVRIVEVTY 129 (141)
T ss_dssp TTHHHHTTCBTTCEEEEEC--TT--------SSE--EEEEEEEEEC
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------CCE--EEEEEEEEEe
Confidence 5779999999999998877 43 433 5677789884
No 56
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=38.00 E-value=22 Score=28.54 Aligned_cols=24 Identities=17% Similarity=0.320 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCC
Q 013922 113 CKDSYKRVLNELMKQVKIPGFRPG 136 (434)
Q Consensus 113 v~~~~~kal~~~~k~akIPGFRkG 136 (434)
--+.+-+.+++++..-+.|||+.|
T Consensus 63 SPEgIv~~IKeWRa~nG~pgFK~~ 86 (94)
T 3u43_A 63 SPEGIVKEIKEWRAANGKSGFKQG 86 (94)
T ss_dssp SHHHHHHHHHHHHHHTTCCCCBCC
T ss_pred CHHHHHHHHHHHHHHcCCccchhh
Confidence 345667889999999999999999
No 57
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=37.73 E-value=46 Score=30.51 Aligned_cols=79 Identities=20% Similarity=0.169 Sum_probs=50.5
Q ss_pred CCCCccHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHH
Q 013922 302 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLL 381 (434)
Q Consensus 302 ~~~~p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ik 381 (434)
+.+.|.|.+++-++++|+.-. .+..+. | -.-|.|.+++ .+ ...+.++.|..|+
T Consensus 170 ~~l~~~~~~a~~~l~~G~is~-pv~t~~--------G---~hiikv~~~~---~~------------~~~~~eevk~~I~ 222 (252)
T 3rgc_A 170 SNADPRLLGLLSQIPVGSFSP-VLNGKN--------G---YELYEVKSKD---GT------------QTPEYEQVKNEVL 222 (252)
T ss_dssp TTSCHHHHHHHHHSCTTCBCC-CBTTTT--------C---EEEEEEEECS---CE------------ECCCHHHHHHHHH
T ss_pred HhcCHHHHHHHHcCCCCCcCC-cEEeCC--------e---EEEEEEeccc---CC------------ccCChHHHHHHHH
Confidence 468899999999999999642 222221 2 1223444432 21 1346789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 013922 382 QKCREVEQTAKDQATDNAILDQLYKMVEID 411 (434)
Q Consensus 382 e~l~~~~~~~~~~~~~~~ll~~L~e~~~~d 411 (434)
..|..+...+ ...+.++.|.+...++
T Consensus 223 ~~l~~~k~~~----~~~~~~~~Lr~~a~I~ 248 (252)
T 3rgc_A 223 NAYVSEQRQN----FIQDYFDKLRSKINIE 248 (252)
T ss_dssp HHHHHHHHHH----HHHHHHHHHHTTSCEE
T ss_pred HHHHHHHHHH----HHHHHHHHHHhhCceE
Confidence 9998775543 3456677777776654
No 58
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=36.05 E-value=28 Score=27.53 Aligned_cols=23 Identities=22% Similarity=0.436 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCC
Q 013922 114 KDSYKRVLNELMKQVKIPGFRPG 136 (434)
Q Consensus 114 ~~~~~kal~~~~k~akIPGFRkG 136 (434)
-+.+-+.+++++..-+.|||+.|
T Consensus 65 PEgIv~~iKeWRa~nG~pgFK~~ 87 (87)
T 1unk_A 65 PEGIVKEIKEWRAANGKPGFKQG 87 (87)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCcccCCC
Confidence 35667889999999999999988
No 59
>1uh6_A Ubiquitin-like 5; beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1
Probab=33.80 E-value=51 Score=26.50 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=22.9
Q ss_pred ccCcCCCCccEEEEEeCCCceEEEEEEEchhhHHHHHHHHHH
Q 013922 81 PEKDRLPADIEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLN 122 (434)
Q Consensus 81 ~~~~~~~~~m~V~~e~~~~~~~~l~V~v~~~ev~~~~~kal~ 122 (434)
.+.+..++ |+|+++...+.. ++++|++++.=..+.+.+.
T Consensus 21 ~~~~~~~m-m~I~VKtl~Gk~--i~lev~p~dTV~~lK~~Ia 59 (100)
T 1uh6_A 21 GSEGAATM-IEVVCNDRLGKK--VRVKCNTDDTIGDLKKLIA 59 (100)
T ss_dssp CCSSCCCE-EEEEEECSSSSC--EEEEEETTSBHHHHHHHHH
T ss_pred cCCCCCCe-EEEEEECCCCCE--EEEEeCCCCcHHHHHHHHH
Confidence 33333343 999999987744 4466666654444444443
No 60
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=32.79 E-value=32 Score=27.00 Aligned_cols=24 Identities=17% Similarity=0.318 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCC
Q 013922 113 CKDSYKRVLNELMKQVKIPGFRPG 136 (434)
Q Consensus 113 v~~~~~kal~~~~k~akIPGFRkG 136 (434)
--+.+-+.+++++..-+.|||+.|
T Consensus 62 spE~Iv~~ik~wRa~~g~p~Fk~~ 85 (85)
T 1gxg_A 62 SPEAVIKEIKEWRAANGKSGFKQG 85 (85)
T ss_dssp SHHHHHHHHHHHHHHTTCCCSSCC
T ss_pred CHHHHHHHHHHHHHHcCCcccCCC
Confidence 345667788999999999999988
No 61
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=32.73 E-value=28 Score=27.36 Aligned_cols=24 Identities=13% Similarity=0.242 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCCCCC
Q 013922 113 CKDSYKRVLNELMKQVKIPGFRPG 136 (434)
Q Consensus 113 v~~~~~kal~~~~k~akIPGFRkG 136 (434)
--+.+-+.+++++..-+.|||+.|
T Consensus 63 spE~Iv~~ik~wRa~~G~pgFK~~ 86 (86)
T 1fr2_A 63 SPSGIVNTVKQWRAANGKSGFKQG 86 (86)
T ss_dssp SHHHHHHHHHHHHHHTTCCCCBC-
T ss_pred CHHHHHHHHHHHHHHcCCcccCCC
Confidence 345667788999999999999987
No 62
>3h36_A Polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransfer structural genomics, PSI-2, protein structure initiative; 1.80A {Streptococcus mutans}
Probab=28.86 E-value=1.1e+02 Score=23.72 Aligned_cols=75 Identities=9% Similarity=0.092 Sum_probs=35.9
Q ss_pred CCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCH----HHHHHHHHHHHHHHH
Q 013922 354 DLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQ----SLFEEQGRQLYGAQL 429 (434)
Q Consensus 354 ~lPELdDefak~l~~~~~Tleelr~~Ike~l~~~~~~~~~~~~~~~ll~~L~e~~~~dlPe----slv~~e~~~~~~~~l 429 (434)
.+|+.|+++...+.. -.-+.+++.+... .++....+-..++..++++|.+..+-+-|. ..|..-...+-+..+
T Consensus 5 ~~~~~~~el~~~v~~--~~~~~l~~a~~~~-~K~eR~~a~~~ik~~v~~~l~e~~~~~~~~~~~~~~i~~~~~~lek~iv 81 (93)
T 3h36_A 5 ELLQVDADLQAEIVG--KYNADLQKAVQIE-EKKASEIATEAVKEHVTAEYEERYAEHEEHDRIMRDVAEILEQMEHAEV 81 (93)
T ss_dssp ---CCCHHHHHHHHH--HHHHHHHHHHHCS-SHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH--HHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHhhCccchhhhhhHHHHHHHHHHHHHHHH
Confidence 467888888777621 1124444444332 222222334456677777776543222221 445555555555554
Q ss_pred Hh
Q 013922 430 LQ 431 (434)
Q Consensus 430 ~~ 431 (434)
++
T Consensus 82 R~ 83 (93)
T 3h36_A 82 RR 83 (93)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 63
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=27.15 E-value=26 Score=28.43 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhhCCCCCCCCC
Q 013922 115 DSYKRVLNELMKQVKIPGFRPG 136 (434)
Q Consensus 115 ~~~~kal~~~~k~akIPGFRkG 136 (434)
+.+-+.+++++..-+.|||+.|
T Consensus 80 EgIvk~IKeWRa~nGkPgFK~~ 101 (101)
T 2k0d_X 80 EGIVKEIKEWRAANGKPGFKQG 101 (101)
T ss_dssp GGHHHHHHHHHHHHTCCCCBCC
T ss_pred HHHHHHHHHHHHHcCCcccCCC
Confidence 3455788999999999999988
No 64
>2nsa_A Trigger factor, TF; chaperone; 1.70A {Thermotoga maritima}
Probab=26.48 E-value=2e+02 Score=24.43 Aligned_cols=48 Identities=15% Similarity=0.237 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH
Q 013922 372 TIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYG 426 (434)
Q Consensus 372 Tleelr~~Ike~l~~~~~~~~~~~~~~~ll~~L~e~~~~dlPeslv~~e~~~~~~ 426 (434)
|.++|++.++++..+.. ...-|++++++...+.+.+.-|++++..+-+
T Consensus 76 ~~e~~~e~~~~~A~~~v-------k~~lil~~ia~~e~I~vsdeev~~~i~~~A~ 123 (170)
T 2nsa_A 76 SEEKFREELKERILDDI-------KRDRVIEVLAQEKGISVNDEELEKEAEELAP 123 (170)
T ss_dssp CHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 55665555544443332 3456789999999999999988887776644
No 65
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=25.20 E-value=2.1e+02 Score=27.17 Aligned_cols=81 Identities=10% Similarity=0.042 Sum_probs=52.9
Q ss_pred CCC---ccHHHHhcCCCCCceEEEEEcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHH
Q 013922 303 KVL---PGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKET 379 (434)
Q Consensus 303 ~~~---p~fe~~LiG~k~Ge~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~ 379 (434)
.+. |.|.+++-++++|+.-. .+..+. .| -.-|.|.+++ | .+.++.|..
T Consensus 225 ~l~~~~~~~~~a~~~l~~Geis~-pv~t~~-------~G---~hIikv~~~~----~--------------~~~eevk~~ 275 (325)
T 3nrk_A 225 DLYKYSKITATIAAPLPNGGVSE-VFRDER-------KR---YCILKIEGKR----P--------------TPMENLRGG 275 (325)
T ss_dssp HHHHHCHHHHHHHTTCCTTCBCC-CEECTT-------SC---EEEEEEEEEE----E--------------CCHHHHHHH
T ss_pred cccccCHHHHHHHHcCCCCCCCc-eEEeCC-------Ce---EEEEEEeccC----C--------------CCHHHHHHH
Confidence 466 99999999999999643 222122 12 2234555552 1 257889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHH
Q 013922 380 LLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSL 416 (434)
Q Consensus 380 Ike~l~~~~~~~~~~~~~~~ll~~L~e~~~~dlPesl 416 (434)
|+..|..+...+ ...+.++.|.+...+++-+..
T Consensus 276 i~~~l~~~k~~~----~~~~~l~~Lr~~a~I~i~d~~ 308 (325)
T 3nrk_A 276 IQNILYRDKEED----TFHRWLKESRAEIPIQIFDEA 308 (325)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHSCEEECCHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHhcCeEEEecHH
Confidence 998887665433 456778888888888775443
No 66
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=24.39 E-value=3.3e+02 Score=23.17 Aligned_cols=52 Identities=15% Similarity=0.247 Sum_probs=35.1
Q ss_pred eEEEEEcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 013922 320 TKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV 387 (434)
Q Consensus 320 ~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~l~~~ 387 (434)
..++++.+-.||. .++=|+++.+.+ +.-|+ ||. .|.|+++|++.|..++..-
T Consensus 74 ~~~vEvhil~df~-~dlYG~~i~v~f-~~~lR----~E~----------kF~sle~L~~qI~~D~~~a 125 (147)
T 1nb0_A 74 KKSMETHIMHTFK-EDFYGEILNVAI-VGYLR----PEK----------NFDSLESLISAIQGDIEEA 125 (147)
T ss_dssp CEEEEEEESSCCS-SCCTTSEEEEEE-EEEEE----CCC----------CCSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCCC-CccCCCEEEEEE-ehhcc----CCc----------CCCCHHHHHHHHHHHHHHH
Confidence 4567777554553 478898776655 33333 443 5789999999999987654
No 67
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=21.77 E-value=3.9e+02 Score=23.13 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=35.2
Q ss_pred eEEEEEcCCCCCCCCCCCCceeEEEEEEEEeecCCCCCCCHHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 013922 320 TKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV 387 (434)
Q Consensus 320 ~~~~~i~fPed~~~~~laGk~v~f~V~Ik~Ik~~~lPELdDefak~l~~~~~Tleelr~~Ike~l~~~ 387 (434)
..++++.+-.|| ..++=|+++.+.+ +.-|+ ||. .|.|+++|++.|..+++.-
T Consensus 92 ~~~vEvhil~df-~~dlYG~~i~V~f-~~~lR----~E~----------kF~sle~L~~qI~~D~~~a 143 (163)
T 1n08_A 92 LRSAEVHLIERQ-GEDFYEEIMRVIV-LGYIR----PEL----------NYAGLDKLIEDIHTDIRVA 143 (163)
T ss_dssp CEEEEEEETTCC-SCCCTTCEEEEEE-EEEEE----CCC----------CCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCC-CCccCCCEEEEEE-HHhcc----CCC----------CCCCHHHHHHHHHHHHHHH
Confidence 456777765455 3578898776655 33333 443 5789999999999987654
Done!