BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013924
(434 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 143/338 (42%), Gaps = 80/338 (23%)
Query: 3 QICSVKAGGMMSLAIDNAGA---LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
QI SV G ++A +G W WG D G + FTP P+ HG +
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWG-----DFGRLGHGNSSDLFTPLPIKALHGIRI 122
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
++ACG H +A+ GE SWG N NGQLGLGD E L P+ I+ F
Sbjct: 123 KQIACGDSHCLAVTMEGEVQ--------SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR- 173
Query: 120 WAVYEVTCGSFHTALLTH----------------------RKRPNDMLES---------- 147
+ V G+ HTA +T R P + +
Sbjct: 174 --IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC 231
Query: 148 ------------MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 195
+T+G + GQLGHG + L+P +++ L ++ + G HT
Sbjct: 232 GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMA 290
Query: 196 VSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 253
++S G ++ WG K +G+ N D SP+ + P Q VQV+CG
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV-----RFPDDQKVVQVSCGW 337
Query: 254 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 338 RHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 35/244 (14%)
Query: 47 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 106
+P+ + GH +V V CG++H VA +G + YSWG + G+LG G+
Sbjct: 57 SPTQLSALDGHQIVSVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLF 109
Query: 107 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 166
P I+ + + ++ CG H +T +E ++G +NGQLG G T+
Sbjct: 110 TPLPIKALHGIR---IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTE 158
Query: 167 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEA 224
+LVP++++ + + + V G HT+ V+ GD+ W WG LGL +
Sbjct: 159 DSLVPQKIQAF-EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDR 209
Query: 225 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 284
D + P ++ G G K VACG HT+ V+ G L+++G + G LG G D
Sbjct: 210 TDRLVPERVTSTG--GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLED 263
Query: 285 FFAP 288
P
Sbjct: 264 HLIP 267
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 169 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 228
+ ++V P+ V ++S G H+ + S V SWG + + L +A D
Sbjct: 5 MAADEVTAPPRKVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRP 56
Query: 229 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
SP +S H V V CGA HTV + G +++SWG G G LG G + D F P
Sbjct: 57 SPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 281
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 282 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 330
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
+V+CG HT +T R + +G G NGQLG G + P+ ++ L
Sbjct: 331 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
S I + G ++A+ + G L+ WG S P V VV+
Sbjct: 276 SFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---PVQVRFPDDQKVVQ 332
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
V+CG H +A+ E ++WG NGQLG+G+ R PKIIE + D
Sbjct: 333 VSCGWRHTLAVT--------ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVD 380
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 183 LVSVDCGLFHT-SVVSSAGDVWSWG 206
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 117
++++ CG H +AL GE + +WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGELF--------AWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 178 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 236
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 237 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3052 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3108
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y +WG G+LG GD ++L+PK+++ V +V
Sbjct: 3109 SSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3157
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
CGS L E + +++G G+ G+LG G ++ +P+ ++ L +
Sbjct: 3158 ACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQGVCQ 3210
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
++CG + ++ +G VW+WG L + + + P ++ G G K
Sbjct: 3211 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGKKI-- 3260
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3261 -VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 46 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 103
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 534
Query: 104 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 586
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 220
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 587 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 639
Query: 221 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 640 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 691
Query: 279 TG 280
G
Sbjct: 692 HG 693
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG + G + P + G VV VA G
Sbjct: 4045 AVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 4101
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG+ Y +WG G+LG D E +L+PK++E V ++
Sbjct: 4102 GAHSACVTAAGDLY--------TWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VIDI 4150
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4151 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGV 4201
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPH 239
V V+CG + ++ +G V++WG KG LG + + R G
Sbjct: 4202 VKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QVQGLQ 4249
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4250 GKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 130/296 (43%), Gaps = 55/296 (18%)
Query: 9 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSP--VWDFHGHTVVKVA 63
AGG SL A+ G ++ G +T G G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGE------ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA 3052
Query: 64 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3053 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3101
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3102 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3152
Query: 182 YLVSVDCGL--FHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 235
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3203
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3204 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 32/255 (12%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 3158 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 3208
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
++ CG+ + LT + WT+G G+ +LGHG+ P+ V+ L +
Sbjct: 3209 CQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKK 3259
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 242
+V V G H V+ +G V++WG + G N + T N P L+ G +
Sbjct: 3260 IVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLE 3308
Query: 243 FQDPVQVACGAAHTV 257
Q +VACG++H+V
Sbjct: 3309 GQKITRVACGSSHSV 3323
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
++ V AGG S + AG L+ WG L S +E P V GH V
Sbjct: 4094 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHRV 4147
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4148 IDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TG 4198
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4199 LGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-Q 4249
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNG 237
++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4250 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL- 4300
Query: 238 PHGPKFQDPVQVACGAAHTV 257
G K +VACG+AHT+
Sbjct: 4301 -QGKKVN---RVACGSAHTL 4316
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 253
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4154
Query: 254 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 280
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 767
Query: 187 DCGLFHTSVVSSAGDVWSWGME 208
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 206
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 264
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3957 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3994
Query: 147 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 193
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4053
Query: 194 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 251
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4100
Query: 252 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4101 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 154 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 271
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 272 GRSGVLGTGKTIDFFAPAIV 291
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG + A+ G ++ WG D G FS ++ P + + +ACG
Sbjct: 3051 AVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3107
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H AL S+GE Y+WG G+LG GD ++L+PK+++ V +V
Sbjct: 3108 SSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR---VIQV 3156
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
CGS L E + +++G G+ G+LG G ++ +P+ ++ L +
Sbjct: 3157 ACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQGVCQ 3209
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 245
++CG + ++ +G VW+WG L + + + P ++ G G K
Sbjct: 3210 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGKKI-- 3259
Query: 246 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3260 -VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 45 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 103 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 219
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 220 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 277
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 278 GTG 280
G G
Sbjct: 690 GHG 692
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ + G ++ WG + G + P + G VV VA G
Sbjct: 4043 AVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 4099
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
H + +AG+ Y+WG G+LG D E +L+PK++E V ++
Sbjct: 4100 GAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDI 4148
Query: 126 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 183
CGS T LT + W++G G+ G+LG G + VP ++ L + +
Sbjct: 4149 ACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-TGLGV 4199
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPH 239
V V+CG + ++ +G V++WG KG LG + + R G
Sbjct: 4200 VKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QVQGLQ 4247
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4248 GKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 9 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 63
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 64 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 181
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 182 YLVSVDCGL--FHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 235
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 32/255 (12%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3100 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3156
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 3157 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 3207
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
++ CG+ + LT + WT+G G+ +LGHG+ P+ V+ L +
Sbjct: 3208 CQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKK 3258
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 242
+V V G H V+ +G V++WG + G N + T N P L+ G +
Sbjct: 3259 IVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLE 3307
Query: 243 FQDPVQVACGAAHTV 257
Q +VACG++H+V
Sbjct: 3308 GQKITRVACGSSHSV 3322
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 59
++ V AGG S + AG L+ WG L S +E P V GH V
Sbjct: 4092 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHRV 4145
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4146 VDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TG 4196
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4197 LGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-Q 4247
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNG 237
++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4248 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL- 4298
Query: 238 PHGPKFQDPVQVACGAAHTV 257
G K +VACG+AHT+
Sbjct: 4299 -QGKKVN---RVACGSAHTL 4314
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 253
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 254 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 280
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 186
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 187 DCGLFHTSVVSSAGDVWSWGME 208
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 206
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 264
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 265 KLWSWGRGRSGVLGTGKTIDFFAPAIV 291
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 147 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 193
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 194 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 251
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 252 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 154 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 211
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 212 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 271
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 272 GRSGVLGTGKTIDFFAPAIV 291
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 41/291 (14%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG +LA+ G ++ WG + G + + P V + VACG
Sbjct: 3077 AVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAKKIRDVACG 3133
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ S GE Y +WG G+LG GD ++L+PK++ + V +V
Sbjct: 3134 SSHSAAISSQGELY--------TWGLGEYGRLGHGDNTTQLKPKLVTAL---AGRRVVQV 3182
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
CGS L + + +++G G+ G+LG G ++ + P +++ L + +V
Sbjct: 3183 ACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL-SGIGVVQ 3235
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGP 241
++CG + ++ AG+VW+WG KG LG + + + + PI G G
Sbjct: 3236 IECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI----GGLRGR 3283
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
+ + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3284 RV---IHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3330
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 6 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 65
+V +GG LA+ G ++ WG + G + +S P V +G +V +ACG
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 66 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 125
S H A+ ++G +WG G+LG GD E +LRPK++E + ++
Sbjct: 4197 SAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YRAIDI 4245
Query: 126 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 185
CGS L N W++G G+ G+LG G + +P +++ L + +V
Sbjct: 4246 ACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-LGVVK 4298
Query: 186 VDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGP 241
V+CG + ++ +G V++WG KG LG + R + A+ G
Sbjct: 4299 VECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL----------QGK 4346
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4347 KI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 32/233 (13%)
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V G +H +AL + GE Y +WG +G+LG G+R S RPK++E N S
Sbjct: 4139 VAVNSGGKHCLALTTEGEVY--------AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS- 4189
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V ++ CGS H+A +T T+G G G+LGHG ++ L P+ V+ L
Sbjct: 4190 --VADIACGSAHSAAIT--------ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLG 4239
Query: 180 YVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
Y + ++ G T ++ +VWSWG + G L R + P I
Sbjct: 4240 YRAIDIACGSGDAQTLCITDDDNVWSWG-DGDYG-----KLGRGGSDGCKLPYKIESLAG 4293
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G V+V CG+ +V +T G +++WG+G LG G P V
Sbjct: 4294 LG-----VVKVECGSQFSVALTKSG-AVYTWGKGDFHRLGHGSVDHVRRPKKV 4340
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I V G S AI + G L+ WG L + G + P V G VV+V
Sbjct: 3126 KIRDVACGSSHSAAISSQGELYTWG---LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQV 3182
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
ACGS L ED +SWG + G+LG G E P IE S V
Sbjct: 3183 ACGSRDAQTLALT------EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL---SGIGV 3233
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
++ CG+ + LT R ++ WT+G G+ +LGHG Q P+ + L +
Sbjct: 3234 VQIECGAQFSLALT---RAGEV-----WTWGKGDYYRLGHGGDQHVRKPQPIGGL-RGRR 3284
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWG 206
++ V G H V+ AG V++WG
Sbjct: 3285 VIHVAVGALHCLAVTDAGQVYAWG 3308
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V+ G S+A+ +GA++ WG D G S+ P V G ++ +A
Sbjct: 4296 VVKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDHVRRPKKVAALQGKKIISIA 4352
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS H VA +GE Y +WG N+ GQLG G + RP+++ +
Sbjct: 4353 TGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTAIQRPRLVAALQGKH---IV 4401
Query: 124 EVTCGSFH-----TALLTHRKRP 141
+VTCGS H T+ L+ R RP
Sbjct: 4402 KVTCGSAHTLALSTSQLSERLRP 4424
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 82 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 138
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 2982 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQ- 3036
Query: 139 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 197
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3037 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
Query: 198 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 255
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 3136
Query: 256 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
+ ++ G +L++WG G G LG G P +V
Sbjct: 3137 SAAISSQG-ELYTWGLGEYGRLGHGDNTTQLKPKLV 3171
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 118/274 (43%), Gaps = 46/274 (16%)
Query: 1 MSQIC--SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 58
+ Q C SV G S AI G L WG + G + P+ V H
Sbjct: 665 LEQHCVQSVYCGCSYSAAITCGGNLLTWGRG---TYARLGHGNSDDRSLPTLVVALSDHM 721
Query: 59 VVKVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
VV VA GS H +AL S G + ++WG + G+LG G+ L+P ++E+ +
Sbjct: 722 VVDVALGSGDAHSLALTSEG--------LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR 773
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG----LGENGQLGHGTTQSALVPE 172
V V GS + L+ E +T+G LG QL + Q VP
Sbjct: 774 -----VQRVFAGSQFSVALSS--------EGQLYTWGKATCLGH--QLVERSVQGCSVPR 818
Query: 173 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
V L Q+ +V V + H +SS+G+V+ WG +CP AS++ +PIL
Sbjct: 819 LVSSL-QHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPIL 874
Query: 233 ISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYK 265
+S P F P +AC +A +++ T ++
Sbjct: 875 VS-----LPTF--PASGIACTSAQSLVWTQSSHQ 901
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWGRGT 696
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
A L + D P L+ H V + G AH++ +T +G +++W
Sbjct: 697 ------YARLGHGNSDDRSLPTLVVALSDH---MVVDVALGSGDAHSLALTSEGL-VFAW 746
Query: 270 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-----------KQDELNTGG----LDDEI 314
G G G LG G P +V P + + +L T G L ++
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL 806
Query: 315 KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFG 359
+ ++G +L S+++ +++ +SV A G +FG
Sbjct: 807 VERSVQGCSV--PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 9 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 68
+G +L I + +W WG+ D G P + G VVKV CGS+
Sbjct: 4249 SGDAQTLCITDDDNVWSWGDG---DYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQF 4305
Query: 69 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 128
VAL +G Y+WG + +LG G + RPK + + + G
Sbjct: 4306 SVALTKSG--------AVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK---IISIATG 4354
Query: 129 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 188
S H + +T+G + GQLG GT + P V L Q ++V V C
Sbjct: 4355 SLHCVACSD--------SGEVYTWGDNDEGQLGDGTVTAIQRPRLVAAL-QGKHIVKVTC 4405
Query: 189 GLFHTSVVSSA 199
G HT +S++
Sbjct: 4406 GSAHTLALSTS 4416
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ ++ G SLA+ AG +W WG D G P P+ G V+ VA
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVA 3289
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ + V
Sbjct: 3290 VGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF-VN 3338
Query: 124 EVTCGSFHT 132
V CGS H+
Sbjct: 3339 RVACGSSHS 3347
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 36/228 (15%)
Query: 48 PSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 105
P P+ + + +A C H +A+ S Y SWG + +LG GD +R
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAY--------SWGTGEDHRLGHGDTHAR 656
Query: 106 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 165
P I Q +VY CG ++A +T T+G G +LGHG +
Sbjct: 657 AVPTKIAALEQHCVQSVY---CGCSYSAAIT--------CGGNLLTWGRGTYARLGHGNS 705
Query: 166 QSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 224
+P V L ++ + V++ G H+ ++S G V++WG + G L
Sbjct: 706 DDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWG-DGDYG-----KLGNGNC 759
Query: 225 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 272
++ PIL+ P+ Q +V G+ +V ++ +G +L++WG+
Sbjct: 760 NGSLQPILVESL----PRVQ---RVFAGSQFSVALSSEG-QLYTWGKA 799
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 87 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4052 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4103
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 203
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4104 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 204 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4159 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITA 4205
Query: 262 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G+ L +WG+GR G LG G + D P +V
Sbjct: 4206 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4234
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V G + LA+ +AG ++ WG+ D +G + + P+ V V +V
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGSGNTFVNKKPALVIGLDAVFVNRV 3340
Query: 63 ACGSEHVVA 71
ACGS H +A
Sbjct: 3341 ACGSSHSIA 3349
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 183/450 (40%), Gaps = 83/450 (18%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 59
+ ++ S K +LA G ++ WG+ D G G S + G V
Sbjct: 457 IKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 514 VCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN--- 562
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q
Sbjct: 563 --VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEAL-Q 612
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 239
+++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELAA- 664
Query: 240 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 299
V V+ G +H + ++ D ++++WG G G G + P+T+
Sbjct: 665 ----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PITKP 709
Query: 300 FKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQSKL 343
K GLD I + + A RD ++ + +EE +
Sbjct: 710 KK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLR- 762
Query: 344 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDIT-KEWENMLESA-----DRSKLV 397
S +ERY ++ I PF P S + F + K N L A S L
Sbjct: 763 SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATSILG 816
Query: 398 RLERFYRNMLAGVKDKLMKRRIQEIVNECL 427
R RN+L + D + IQE+V E L
Sbjct: 817 RQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGD---GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
S G+ + ++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGKLF--------TFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 253
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4300
Query: 254 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 90 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 149
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 210 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 270 GRGRSGVLGTGKTIDFFAPAIV 291
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
I V G S+A+ G ++ +G LP+ + P + G +
Sbjct: 4241 IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVIIE 4294
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4295 DVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN-- 4344
Query: 121 AVYEVTCGSFHTALLTHRKRP 141
V +++ G H+A T P
Sbjct: 4345 -VRQISAGRCHSAAWTAPPVP 4364
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
G+T + +P +V Q ++S+ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 283 IDFFAPAIVL 292
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMSIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 234
Q + + V CG HT V++ G +++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 235 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 285
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVILPHLTHFCCTDDVFAC 359
Query: 286 FAPAIVLWPPLTEE 299
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 60
+ S+ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMSIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 108
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 106
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 107 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 165
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 166 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 225
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 226 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 285
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 286 FAPAIV 291
P +V
Sbjct: 277 RGPQLV 282
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 62
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 121
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 175
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 233
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 234 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 274
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V AGG S A+ G + WG+ + G V S P V VV ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG H L G+ +++G N +GQLG + P+++E + V
Sbjct: 243 CGDAHTAVLTQDGKV--------FTFGDNRSGQLGYSPTPEKRGPQLVERID----GLVS 290
Query: 124 EVTCGSFHTALLTH 137
++ CGS+HT H
Sbjct: 291 QIDCGSYHTLAYVH 304
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 293
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 239 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 280
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 281 KTIDFFAPAIVLWPPLTEE 299
FA V W L+ E
Sbjct: 355 DVFACFATPAVTWRLLSVE 373
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 60
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 121 AVYEVTCGSFHTA 133
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 281
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 293
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 239 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 280
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 281 KTIDFFAPAIVLWPPLTEE 299
FA V W L+ E
Sbjct: 355 DVFACFATPAVTWRLLSVE 373
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 60
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 121 AVYEVTCGSFHTA 133
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 163 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 222
G+T + +P +V Q ++++ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 283 IDFFAPAIVL 292
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 234
Q + + V CG HT V++ G +++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 235 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 285
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFAC 359
Query: 286 FAPAIVLWPPLTEE 299
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 60
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 108
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 48/297 (16%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHT 58
I V G SLA+ + G L+ WG + ++G L+++ P + + T
Sbjct: 85 HIIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQT 138
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 117
+++V+CG+ H +AL + G+ + +WG N++GQLGLG + S+ P+ + + +
Sbjct: 139 ILQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EG 189
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 190 IPLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-L 238
Query: 178 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILIS 234
+ +V + CG HT+V++ +G V+++G G C L + D ++P + +
Sbjct: 239 LRTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELM 292
Query: 235 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
G+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 293 GS--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 176
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 230
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 231 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 290
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 291 V 291
V
Sbjct: 236 V 236
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ V AGG S A+ +GA++ WG + ++ G +P V VV ++
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVYIS 248
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPWAV 122
CG EH L +G + ++GA + GQLG + P+ ++E + V
Sbjct: 249 CGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE----V 296
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 175
++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 297 TQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 99/235 (42%), Gaps = 29/235 (12%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ S V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIV 245
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
Y + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 246 Y-ICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI- 295
Query: 183 LVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 236
+ V CG HTS V S+G ++S+ GL N L + SP + GN
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKV----- 288
Query: 239 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 89 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 135
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 136 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 163
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 164 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 219
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 220 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 280 GKTIDFFAPAIV 291
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 267 WSWGRGRSGVLG 278
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 99/235 (42%), Gaps = 29/235 (12%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ S V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIV 245
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
Y + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 246 Y-ICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI- 295
Query: 183 LVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 236
+ + CG HTS V S+G ++S+ GL N L + SP + GN
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + WG N GQLGLG + + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIECQKQTSPQLIKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 239 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 89 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 135
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 136 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 163
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 164 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 219
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 220 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
E SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---ECQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 280 GKTIDFFAPAIV 291
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 267 WSWGRGRSGVLG 278
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 127/278 (45%), Gaps = 50/278 (17%)
Query: 10 GGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 64
G S + L+M WG L G S +S P+ V V AC
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGL------GSKSAISK--PTCVKALKPEKVKLAAC 94
Query: 65 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 124
G H + G Y+ G NN GQLGLGD E R +I F S + +
Sbjct: 95 GRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNTFHVISFFT--SEHKIKQ 144
Query: 125 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 184
++ GS +A LT R + +G GQ+G + VP+QV + + V +
Sbjct: 145 LSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWI 195
Query: 185 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPK 242
S CG +H++ V++ G+++ +G E G LGL PN L G+ +P L+S P
Sbjct: 196 S--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----GNHRTPQLVS----EIP- 242
Query: 243 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 243 -EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 52/291 (17%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 181
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDFFAPAI 290
+ Q ++CG HT L+TD G ++++G GR G LG G + F P +
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLGLENFTNHFIPTL 342
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 61
+I + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 119
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 120 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 175
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 213
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 103
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLVPKKLEALCGKKIKSLSYGSGPHVLLTT-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 104 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 163
+ P ++ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--VQVCTNLLIKQVIEVACGSHHSMALA--------ADGELFAWGYNNCGQVGSG 163
Query: 164 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 223
+T + P +V +V++ CG + V +G+V+ WG N L
Sbjct: 164 STANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG------NGQLGLGN 217
Query: 224 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 283
G+ ++P+ ++ HG Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPVRVA--ALHGMCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGSKN 271
Query: 284 DFFAPAIVL 292
+ +P ++
Sbjct: 272 NLLSPTQIM 280
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 29/214 (13%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGH 57
+ Q+ V G S+A+ G L+ WG NC G S + TP V + H
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHTK 181
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALH-- 231
Query: 118 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 177
V ++ CG HT LT E + + +G GQLG G+ + L P Q+
Sbjct: 232 -GMCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282
Query: 178 PQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 210
+ V ++ C HTS + G V+ WG +G
Sbjct: 283 KERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 315
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 21 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 77
G ++ WG+ L + +T G + V T + V++VACGS H +AL + GE
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQVIEVACGSHHSMALAADGE 148
Query: 78 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 137
+ +WG NN GQ+G G ++ P+ + N V + CG T
Sbjct: 149 LF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLHTKRVVNIACGQ------TS 192
Query: 138 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 197
D E W G NGQLG G + L P +V L + + + CG HT ++
Sbjct: 193 SMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL-HGMCVNQIVCGYAHTLALT 249
Query: 198 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 257
G +++WG T + G L+S K + AC + HT
Sbjct: 250 DEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTS 298
Query: 258 LVTDDGYKLWSWG--RGRSGVL 277
G ++ WG RG+S +L
Sbjct: 299 AAKTQGGHVYMWGQCRGQSVIL 320
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHN 102
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
+ L I+P+ + N + ++VACG+ H++ + DG +L++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVIEVACGSHHSMALAADG-ELFA 151
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 99/235 (42%), Gaps = 29/235 (12%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
QI V G SLA+ A ++ WG G +P + G ++V
Sbjct: 138 QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQV 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
A G H L +G + WG N GQLGL D R P ++++ S V
Sbjct: 196 AAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIV 245
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 182
Y + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 246 Y-ICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI- 295
Query: 183 LVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 236
+ + CG HTS V S+G ++S+ GL N L + SP + GN
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 59
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 118
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 178
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 239 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 89 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 207 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 263
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 264 YKLWSWGRGRSGVLGTG 280
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 148 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 207 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 266
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 267 WSWGRGRSGVLG 278
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 82 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 141
ED V Y+WG N QLG G + P ++ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 142 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 201
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 202 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 262 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 292
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 129/322 (40%), Gaps = 54/322 (16%)
Query: 21 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 77
G ++ WG+ L + +T G + V T + VV+VACGS H +AL + GE
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQVVEVACGSHHSMALAADGE 148
Query: 78 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 137
+ +WG NN GQ+G G ++ P+ + N V + CG T
Sbjct: 149 VF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACGQ------TS 192
Query: 138 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 197
D E W G NGQLG G + L P +V L V + + CG HT ++
Sbjct: 193 SMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL-HSVCVNQIVCGYAHTLALT 249
Query: 198 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHT 256
G +++WG L + +SP I + + V++A C +AHT
Sbjct: 250 DEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHT 297
Query: 257 VLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFKQDELNT 307
G ++ WG RG+S +L T FA V W L+ E +D L
Sbjct: 298 SAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATPAVSWRLLSVE-HEDFLTV 356
Query: 308 GGLDDEIKTKDLEGAEERDEKL 329
E K+ + E D K
Sbjct: 357 A----ESLKKEFDSPETADLKF 374
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 208
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
+ L I+P+ + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 269 WGRGRSGVLGTGKTIDFFAPAIV 291
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 40/226 (17%)
Query: 51 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 110
V ++ G +ACG+EH++ L S+G+ +WG N GQ G+G +I
Sbjct: 770 VLEYPGGRPRAIACGAEHILVLSSSGQ--------LSAWGGNRFGQCGVGHSF-----RI 816
Query: 111 IETFNQDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--TTQS 167
D W A+ ++ CG FH+A + + WTFG G GQLGHG +
Sbjct: 817 ANLHQVDGDWPAIEKIACGQFHSAFICS--------DGSLWTFGWGVWGQLGHGGRNNSN 868
Query: 168 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 227
LVP +V L + + CG HT V++ G V +C + S + D
Sbjct: 869 QLVPTRVNGL--ICKVTQIACGRAHTVVLTDTGRVL---------VCGSGSYGQMGVDDD 917
Query: 228 ISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 272
I + P GP + +D +A H++ +T+D +++ WGR
Sbjct: 918 IKKVFAFTPLPLGPLRVRD---IATHYYHSICITEDN-RVFEWGRN 959
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 168/405 (41%), Gaps = 85/405 (20%)
Query: 4 ICSVKAGGMMSLAIDNAGALW-----MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 58
I + G S I + G+LW +WG GG + + P+ V
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQL------GHGGRNNSNQLVPTRVNGLICK- 881
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
V ++ACG H V L G LVC G+ + GQ+G+ D ++ T
Sbjct: 882 VTQIACGRAHTVVLTDTGRV-----LVC---GSGSYGQMGVDDD---IKKVFAFTPLPLG 930
Query: 119 PWAVYEVTCGSFHTALLTHRKR-------PNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
P V ++ +H+ +T R P ++ M + + QL + S+ P
Sbjct: 931 PLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMRM-FVMKKIRSAQLKNTEDPSSPSP 989
Query: 172 EQ---------------------VKELPQYV--YLVSVDCGLFHTSVVSSAGDVWSWGME 208
++E+ ++ +VSV CGL H+++++S G +++WG
Sbjct: 990 STNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWG-- 1047
Query: 209 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 268
KGL + L + + P + P+G K+ V V+ G HT+ TDDG +++
Sbjct: 1048 KGL----DYQLGHGNKNERMEPHQVF--EPNGAKW---VNVSLGNNHTIASTDDG-SVFA 1097
Query: 269 WGR---GRSGVL--GTGKTID----FFAPA---IVLWPPLTE-EFKQDELNTGGLDDEIK 315
WG+ G+ GVL G + D FF A P + E +F Q GL +++
Sbjct: 1098 WGKNDFGQCGVLTKKNGNSADVTKKFFFQARDGRRFMPNVDESQFVQKP----GLIPDVR 1153
Query: 316 TKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGK 360
++L E+ +E + +L S ++V++ + L+ I GK
Sbjct: 1154 VRNLN--EDGNEGVDKEEIVDRLKASDVNVVQAVSKHLYSPIEGK 1196
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 51/260 (19%)
Query: 26 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 85
WG L ST + V + P V ACG H + G+
Sbjct: 64 WGQLGLGSKSTVSKPTCVKALKP--------EKVKFAACGRNHTLVSTEGGK-------- 107
Query: 86 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 145
Y+ G NN GQLGLGD E R +I F S + +++ GS +A LT
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFT--SQRKIKQLSAGSNTSAALTE-------- 157
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+ + +G GQ+G + VP+QV + + + +S CG +H++ V++ G ++++
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVT-VGKPISWIS--CGYYHSAFVTTEGQLYTF 214
Query: 206 GMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP---VQVACGAAHTVLVT 260
G + LGL PN L + + I P VQVACG HTV++T
Sbjct: 215 GEPECGKLGL-PNQLLVNHRMPQPVPGI--------------PGKVVQVACGGGHTVVLT 259
Query: 261 DDGYKLWSWGRGRSGVLGTG 280
+ ++++G G+ G LG G
Sbjct: 260 EKA--VYTFGLGQFGQLGLG 277
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 52/291 (17%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ S + G + + +N G L L D+ F L+S FT + +++
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLG------LGDTEERSTFHLISFFTSQ-------RKIKQLS 146
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
GS AL GE + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALTEDGE--------LFMWGDNSEGQIGLENVTNVCVPQQV-TVGKPISW--- 194
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 181
++CG +H+A +T E +TFG E G+LG + + +P+ V +P V
Sbjct: 195 -ISCGYYHSAFVT--------TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV 245
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
V V CG HT V++ V+++G+ + L L AI I
Sbjct: 246 --VQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHI---------- 292
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDFFAPAI 290
K Q +ACG HT L+TD G ++++G GR G LG G + + F P +
Sbjct: 293 KDQKISFIACGENHTALITDMGL-MYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
+I + AG S A+ G L+MWG+ +S + G V++ P G + +
Sbjct: 141 KIKQLSAGSNTSAALTEDGELFMWGD----NSEGQIGLENVTNVC-VPQQVTVGKPISWI 195
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 122
+CG H + + G+ Y + C G N QL + R + P I P V
Sbjct: 196 SCGYYHSAFVTTEGQLYTFGEPECGKLGLPN--QLLVNHRMPQPVPGI--------PGKV 245
Query: 123 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELP-QY 180
+V CG HT +LT E +TFGLG+ GQLG GT VP+ ++ + Q
Sbjct: 246 VQVACGGGHTVVLT---------EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK 296
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 213
+ ++ CG HT++++ G ++++G + GLGL
Sbjct: 297 ISFIA--CGENHTALITDMGLMYTFGDGRHGKLGLGL 331
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 42 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 101
LV+ P PV G VV+VACG H V L + Y++G GQLGLG
Sbjct: 229 LVNHRMPQPVPGIPGK-VVQVACGGGHTVVLT---------EKAVYTFGLGQFGQLGLGT 278
Query: 102 R--ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 159
E+ + PK IE + + CG HTAL+T DM + +TFG G +G+
Sbjct: 279 FLFETSV-PKAIEHIKD---QKISFIACGENHTALIT------DM--GLMYTFGDGRHGK 326
Query: 160 LGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSS 198
LG G S +P +++ + V CG HT V ++
Sbjct: 327 LGLGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHTLVFAT 366
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 50/279 (17%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ S GG+ + +N G L L D+ F + FTP+ T+ +++
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLG------LGDTDDRDTFHQIVFFTPA-------DTIKQLS 146
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
G+ AL ED + WG N+ GQ+GL D+ + P + T + W
Sbjct: 147 AGANTSAALT--------EDGKLFMWGDNSEGQIGLEDKSNVCIPHEV-TVGKPISW--- 194
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 181
++CG +H+A +T ++ +TFG ENG+LG + + P++V +P+ V
Sbjct: 195 -ISCGYYHSAFVT--------MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV 245
Query: 182 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGGHT-VVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI---------- 292
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
K Q ++CG HT L+T+ G L+++G GR G LG G
Sbjct: 293 KDQKICHISCGENHTALMTELGL-LYTFGDGRHGKLGLG 330
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
P+ + V ACG H + G Y+ G NN GQLGLGD + R
Sbjct: 78 PTCIKALKPEKVKLAACGRNHTLVSTDTG--------GVYAAGGNNEGQLGLGDTDDR-- 127
Query: 108 PKIIETFNQ----DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 163
+TF+Q + +++ G+ +A LT + + +G GQ+G
Sbjct: 128 ----DTFHQIVFFTPADTIKQLSAGANTSAALTEDGK--------LFMWGDNSEGQIGLE 175
Query: 164 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTR 221
+ +P +V + + + +S CG +H++ V+ G+++++G E G LGL PN L
Sbjct: 176 DKSNVCIPHEVT-VGKPISWIS--CGYYHSAFVTMDGELYTFGEPENGKLGL-PNELLMN 231
Query: 222 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ + + I + +QVACG HTV++T+ ++++G G+ G LG G
Sbjct: 232 HRSPQRVLGIP-----------ERVIQVACGGGHTVVLTEK--VVYAFGLGQFGQLGLG 277
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 107
PS W F + ++CG EH A+V+ Y +G+NN GQLGLG + + ++
Sbjct: 27 PSKFW-FKNDIPICLSCGDEHT-AIVTGNNK-------LYMFGSNNWGQLGLGSKAAIIK 77
Query: 108 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 167
P I+ P V CG HT + T + G GQLG G T
Sbjct: 78 PTCIKAL---KPEKVKLAACGRNHTLVSTDT--------GGVYAAGGNNEGQLGLGDTDD 126
Query: 168 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAG 225
Q+ + + G ++ ++ G ++ WG E +GL
Sbjct: 127 RDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL------------ 174
Query: 226 DAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
+ S + I PH P+ ++CG H+ VT DG +L+++G +G LG
Sbjct: 175 EDKSNVCI----PHEVTVGKPISWISCGYYHSAFVTMDG-ELYTFGEPENGKLG 223
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 37/239 (15%)
Query: 44 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-R 102
S+ P P+ + V V+CG EH VA+ G+ ++WGA + GQLG+G+ +
Sbjct: 61 STERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKV--------FAWGAGSEGQLGIGEFK 112
Query: 103 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
E P I+ + + +V+CG +H+ L+ + +++G GQLG
Sbjct: 113 EISFMPTKIKAL---AGIKIIQVSCGHYHSLALSE--------DGHVFSWGRNSEGQLGL 161
Query: 163 G-TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 221
G ++S +P++VK L + + L V G H+ +S G + WG + L +L+
Sbjct: 162 GKNSRSQAIPQKVKSL-EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL----ALSG 216
Query: 222 NEAGDAISPILISGNGPH---GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 277
N+ + I PH K + ++CG HT ++T++G +++++G SG L
Sbjct: 217 NKVKEQIYK-------PHSIGALKNLSVIYISCGYEHTAVLTEEG-QVFTFGGNSSGQL 267
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 46/276 (16%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 62
V G S+A+ + G ++ WG + +EG + SF P+ + G +++V
Sbjct: 79 VSCGKEHSVAVCHKGKVFAWG------AGSEGQLGIGEFKEISFMPTKIKALAGIKIIQV 132
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWA 121
+CG H +AL ED +SWG N+ GQLGLG + S+ P+ +++ + P A
Sbjct: 133 SCGHYHSLAL--------SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL-EGIPLA 183
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL---GHGTTQSALVPEQVKELP 178
+V G H+ L+ L + +G +GQL G+ + P + L
Sbjct: 184 --QVAAGGTHSFALS--------LTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 233
Query: 179 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 238
+ ++ + CG HT+V++ G V+++G L P+ + P LI G G
Sbjct: 234 N-LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQR------GPQLIEGIGG 286
Query: 239 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 274
Q+ C + HT+ ++ S GRG S
Sbjct: 287 RVS------QIECASYHTIAYVYTTGQVVSLGRGPS 316
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G +++ A G H + L S Y S G N+ GQLG +S RP+ I+ N
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVY--------SCGDNSWGQLGQRRDQSTERPEPIQALN 72
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 174
V V+CG H+ + H+ + + +G G GQLG G + + +P ++
Sbjct: 73 D---LHVDLVSCGKEHSVAVCHKGK--------VFAWGAGSEGQLGIGEFKEISFMPTKI 121
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPIL 232
K L + ++ V CG +H+ +S G V+SWG E LG L +N AI +
Sbjct: 122 KALAG-IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG------LGKNSRSQAIPQKV 174
Query: 233 ISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
S G P+ QVA G H+ ++ G + WG RSG L
Sbjct: 175 KSLEGI-------PLAQVAAGGTHSFALSLTGTS-FGWGSNRSGQLA 213
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----VSSFTPSPVWDFHGHT 58
+I V G SLA+ G ++ WG ++EG L S P V G
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGR------NSEGQLGLGKNSRSQAIPQKVKSLEGIP 181
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD---RESRLRPKIIETFN 115
+ +VA G H AL G + + WG+N +GQL L +E +P I
Sbjct: 182 LAQVAAGGTHSFALSLTGTS--------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 233
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 175
S V ++CG HTA+LT E +TFG +GQL P+ ++
Sbjct: 234 NLS---VIYISCGYEHTAVLTE--------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIE 282
Query: 176 ELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 206
+ V ++C +HT + V + G V S G
Sbjct: 283 GIGGRV--SQIECASYHTIAYVYTTGQVVSLG 312
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 179
+ + G H+ LL R + G+N GQLG QS PE ++ L
Sbjct: 24 LLQAASGEHHSLLLFSNHR----------VYSCGDNSWGQLGQRRDQSTERPEPIQALND 73
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 235
+++ V CG H+ V G V++WG + G+G S + A++ I I
Sbjct: 74 -LHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKI-KALAGIKI-- 129
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
+QV+CG H++ +++DG+ ++SWGR G LG GK
Sbjct: 130 -----------IQVSCGHYHSLALSEDGH-VFSWGRNSEGQLGLGKN 164
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 140/333 (42%), Gaps = 48/333 (14%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ + G +++WG+ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWGSF----RDNNGVIGLLEPMKKSMVPVQVQLDVPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ S V + CG++ T ++H E + FGL QLG T+S
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGHVYGFGLSNYHQLGTPGTESCF 281
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 228
+P+ + V G HT + S G +S LG L E +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS------LGRAEYGRLGLGEGAEEK 335
Query: 229 S-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 287
S P LIS + VACGA+ VT DG ++++WG G + LGTG+ D ++
Sbjct: 336 SIPTLIS-------RLPAVSSVACGASVGYAVTKDG-RVFAWGMGTNYQLGTGQDEDAWS 387
Query: 288 PAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 320
P ++ L E +++GG + KD E
Sbjct: 388 PVEMMGKQL-ENRVVLSVSSGGQHTVLLVKDKE 419
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 135 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 194
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 195 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP-VQVACGA 253
+S +G V+S+G L + S+ +E ++ G + Q+ VQV+ G
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGK----VELQEKVVQVSAGD 128
Query: 254 AHTVLVTDDGYKLWSWG--RGRSGVLG 278
+HT +TDDG +++ WG R +GV+G
Sbjct: 129 SHTAALTDDG-RVFLWGSFRDNNGVIG 154
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
+SWG N+ GQLG GD + PK+IE ++ + CG HT LT
Sbjct: 145 WSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE---VIVAAACGRNHTLALTE--------N 193
Query: 147 SMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+TFG + GQLG G T + L P ++ Q + V V CG + +V G+++S+
Sbjct: 194 GTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPI--VKVACGAEFSMIVDCKGNLYSF 251
Query: 206 GMEKGLGLCPN-ASLTRNEAGDAIS---------PILISGNGPHGPKFQD----PV---- 247
G CP L N G I+ ++ K +D PV
Sbjct: 252 G-------CPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVV 304
Query: 248 --QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
VACGA HT LV D +++SWG G G LG + D P +V
Sbjct: 305 ARDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 349
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 146 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 205
E W++G + GQLGHG T+ P+ ++ L + V +V+ CG HT ++ G V+++
Sbjct: 141 EGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEV-IVAAACGRNHTLALTENGTVYTF 199
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
G E LG N+ +SP I NG Q V+VACGA +++V G
Sbjct: 200 G-ENKLGQLGQG----NQTDAVLSPATIQYNG------QPIVKVACGAEFSMIVDCKG-N 247
Query: 266 LWSWGRGRSGVLGTGKTIDFFAPA 289
L+S+G G LG F A A
Sbjct: 248 LYSFGCPEYGQLGHNSDGKFIARA 271
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 108/281 (38%), Gaps = 57/281 (20%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
SL I G LW WG D G P + +V ACG H +AL
Sbjct: 135 SLIITTEGKLWSWGR---NDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAVYEVTCGSFHT 132
G Y++G N GQLG G++ ++ L P I+ Q + +V CG+ +
Sbjct: 192 ENG--------TVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQ----PIVKVACGAEFS 239
Query: 133 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT------------QSALVPEQV------ 174
++ + ++FG E GQLGH + L+P +V
Sbjct: 240 MIVD--------CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEK 291
Query: 175 ----KELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 229
+ LP V V CG HT V+ S V+SWG G G L E D +
Sbjct: 292 TKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGF-GGYG-----RLGHAEQKDEMV 345
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 270
P L+ G + Q+ CG + +++ G L+ WG
Sbjct: 346 PRLVKLFDFPG---RGATQIYCGYQCSFALSEMG-GLFFWG 382
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 237 GPHGPKFQDPVQVAC-----GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
GPH VQV+C AAH++++T +G KLWSWGR G LG G T AP ++
Sbjct: 111 GPHRYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 121
VACG+ H + L S + SWG G+LG +++ + P++++ F+ A
Sbjct: 308 VACGANHTLVLDSQKRVF--------SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 359
Query: 122 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL-----GHGTTQSALVPEQVKE 176
++ CG C +F L E G L + + +S + P+ V++
Sbjct: 360 T-QIYCG------------------YQC-SFALSEMGGLFFWGVTNTSRESTMYPKAVQD 399
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWGMEKGLG 212
L + + S+ CG +S++ +A D SWG G
Sbjct: 400 LCGW-KIRSLACG--KSSIIVAADDSTISWGPSPTFG 433
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 43/286 (15%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I V G + + + G + +G+ + G SL P+ V G+ +V+VA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSG---SNGCLGHGSLTDISQPTIVEALLGYEMVQVA 449
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG+ HV+AL + E ++WG ++G+LGLG RES P+ +
Sbjct: 450 CGASHVLALSTEREL--------FAWGRGDSGRLGLGTRESHSCPQQVP---MPPGQEAQ 498
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELPQYVY 182
V CG + +LT P L C + + G L H + VP +QV+E +
Sbjct: 499 RVVCGIDSSMILT---VPGQALA--CGSNRFNKLG-LDHLSLGEEPVPHQQVEEALSFTL 552
Query: 183 ----------LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 232
L+S+D G H++ V+++GD +++G + + L N + +P
Sbjct: 553 LGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQ------HGQLGTNTRRGSRAPCK 606
Query: 233 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
+ G G K VACG A TV + + +++SWG+G G LG
Sbjct: 607 VQGL--EGIKM---AMVACGDAFTVAIGAES-EVYSWGKGARGRLG 646
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 107 RPKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 165
+P+ I F + S + V CG F TA LT R + TFG G NG LGHG+
Sbjct: 377 QPQFISRFLEGQSGVTIKHVACGDFFTACLTDR--------GIIMTFGSGSNGCLGHGSL 428
Query: 166 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
P V+ L Y +V V CG H +S+ ++++WG
Sbjct: 429 TDISQPTIVEALLGY-EMVQVACGASHVLALSTERELFAWG 468
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
V + V CG F T+ ++ G + ++G N L D P ++ +
Sbjct: 391 VTIKHVACGDFFTACLTDRGIIMTFGSGS------NGCLGHGSLTDISQPTIVEALLGY- 443
Query: 241 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 295
+ VQVACGA+H VL +L++WGRG SG LG G P V PP
Sbjct: 444 ----EMVQVACGASH-VLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPP 493
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
+ S+ G S A+ +G + +G+ G + S P V G + VA
Sbjct: 563 LLSIDLGTAHSAAVTASGDCYTFGS---NQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVA 619
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG VA+ + E Y SWG G+LG D ++ L P+ ++ ++ P+ V
Sbjct: 620 CGDAFTVAIGAESEVY--------SWGKGARGRLGRRDEDAGL-PRPVQ-LDETHPYTVT 669
Query: 124 EVTCGSFHTAL 134
V+C +T L
Sbjct: 670 SVSCCHGNTLL 680
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 52/314 (16%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ V ++ AI + G + WG D G+S T P + ++
Sbjct: 175 RVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVL--GYSDSQKRTAEPTQ-MRLPEICQL 231
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR----LRPKIIETFNQDS 118
A G++H++AL + G+ Y+WG QLG E R L P+ + N
Sbjct: 232 ATGTDHIIALTTTGK--------VYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKN--- 280
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG---HGTTQSALV--PEQ 173
+ V GS+H+ + ++ R + +GL Q G + A++ P
Sbjct: 281 ---IISVGAGSYHSFAIDNKGR--------VYAWGLNITRQCGIEVEDEEEGAVITKPTL 329
Query: 174 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNA---SLTRNEAGDAI 228
V L Y + S+ G HT + G V +WG + LG+ NA ++ ++E G+
Sbjct: 330 VDALEGY-NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNY 388
Query: 229 ---SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI-D 284
+P +I P + +QV CG H + VT DG K++SWG + +G G D
Sbjct: 389 YLSTPTII-------PGLTNVIQVVCGTHHNLAVTSDG-KVYSWGSAENYEVGQGDNDED 440
Query: 285 FFAPAIVLWPPLTE 298
P +V + E
Sbjct: 441 VAVPTLVRSKAIKE 454
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 47/291 (16%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCP-------LPDSSTEGGFSLVSSF---TPSPVWD 53
+ + GGM S A+ + G ++ WG D E G + + TPS V
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 54 FHGH-TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKI 110
H V KV C A+ G C++WG ++G LG D + R
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNG--------CCFTWGTFRCSDGVLGYSDSQKR----T 217
Query: 111 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 170
E P + ++ G+ H LT + +T+G G+ QLG + +
Sbjct: 218 AEPTQMRLP-EICQLATGTDHIIALTTTGK--------VYTWGNGQQFQLGRRMLERRRL 268
Query: 171 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME--KGLGLCPNASLTRNEAGDAI 228
+ ++SV G +H+ + + G V++WG+ + G+ + E G I
Sbjct: 269 QGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI----EVEDEEEGAVI 324
Query: 229 S-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
+ P L+ + K + G HT+ + +DG ++ +WGR LG
Sbjct: 325 TKPTLVDALEGYNVK-----SITGGEHHTLALLEDG-RVLAWGRDDRHQLG 369
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 72/211 (34%), Gaps = 68/211 (32%)
Query: 1 MSQICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFH 55
+ I SV AG S AIDN G ++ WG C + E G + P+ V
Sbjct: 278 LKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITK---PTLVDALE 334
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G+ V + G H +AL+ ED +WG ++ QLG+ D + ET
Sbjct: 335 GYNVKSITGGEHHTLALL--------EDGRVLAWGRDDRHQLGIPDN------ALPETVV 380
Query: 116 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 175
+D Y ++ +
Sbjct: 381 KDEKGNNYYLSTPTI--------------------------------------------- 395
Query: 176 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+P ++ V CG H V+S G V+SWG
Sbjct: 396 -IPGLTNVIQVVCGTHHNLAVTSDGKVYSWG 425
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 149 CWTFGLGENGQLGHGTTQSALV--PEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSW 205
+ FG G +LG G + +V P L V +V + G H++ +S G V++W
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 206 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPH---GPKFQDPVQVACGAAHTVLVTDD 262
G+ L ++E GD + L+ G +V C T +TD+
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 263 GYKLWSWG--RGRSGVLG 278
G ++WG R GVLG
Sbjct: 193 GC-CFTWGTFRCSDGVLG 209
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 124/301 (41%), Gaps = 47/301 (15%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSF----RDNNGVIGLLEPMKKSMVPVQVQLDMPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTTDGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 112 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 169
++ S V + CG++ T ++ E + FGL QLG T S
Sbjct: 230 LLKSRGSRGRVRFQDAFCGAYLTFAISR--------EGHVYGFGLSNYHQLGTPGTASCF 281
Query: 170 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 228
+P+ + V G HT + S G +S LG L E +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYS------LGRAEYGRLGLGEGAEEK 335
Query: 229 S-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 287
S P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D ++
Sbjct: 336 SIPTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQDEDAWS 387
Query: 288 P 288
P
Sbjct: 388 P 388
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 136 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 195
+H+ P +L T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 29 SHKTEPGLVL-----TLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTVC 81
Query: 196 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 255
++ +G V+S+G L + S+ +E ++ G K VQV+ G +H
Sbjct: 82 LNQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDSH 130
Query: 256 TVLVTDDGYKLWSWG--RGRSGVLG 278
T +T+DG +++ WG R +GV+G
Sbjct: 131 TAALTEDG-RVFLWGSFRDNNGVIG 154
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
TVV +C + H + + + G+ + SWG N GQLG GD + P++IE +
Sbjct: 149 RTVVSGSCAA-HSLLITTEGKLW--------SWGRNEKGQLGHGDTKRVEAPRLIEALSH 199
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ A+ CG HT LT + FG + GQLG G Q+ VP +
Sbjct: 200 E---AIVLAACGRNHTLALTD--------TGSVFAFGENKMGQLGLG-NQTDAVPSPAQI 247
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN-ASLTRNEAGDAIS------ 229
+ + + CG + ++ G+++S+G CP L N G I+
Sbjct: 248 MYNGQPITKMACGAEFSMLMDCKGNLYSFG-------CPEYGQLGHNSDGKFIARAQRIE 300
Query: 230 ----------PILI--SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGV 276
I I + +G P V+ VACGA HT LV D +++SWG G G
Sbjct: 301 YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGR 359
Query: 277 LGTGKTIDFFAPAIV 291
LG + D P +V
Sbjct: 360 LGHAEQKDEMVPRLV 374
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 83/217 (38%), Gaps = 45/217 (20%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
SL I G LW WG + G P + +V ACG H +AL
Sbjct: 160 SLLITTEGKLWSWGR---NEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
G + ++G N GQLGLG++ + P + P + ++ CG+ +
Sbjct: 217 DTGSVF--------AFGENKMGQLGLGNQTDAV-PSPAQIMYNGQP--ITKMACGAEFSM 265
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTT------------QSALVPEQV------- 174
L+ + ++FG E GQLGH + LVP +V
Sbjct: 266 LMD--------CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKT 317
Query: 175 ---KELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+ LP V + V CG HT V+ S V+SWG
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 354
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVAL 72
+LA+ + G+++ +G + + G + PSP ++G + K+ACG+E + +
Sbjct: 212 TLALTDTGSVFAFGE----NKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLM 267
Query: 73 VSAGETYKGEDLVCYSWGANNNGQLGLG------------DRESRLRPKIIETFNQDSP- 119
G Y S+G GQLG + + L P+ + F + +
Sbjct: 268 DCKGNLY--------SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKD 319
Query: 120 --------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
V +V CG+ HT +L +KR +++G G G+LGH + +VP
Sbjct: 320 GQILPVPNVVVRDVACGANHTLVLDSQKR--------VFSWGFGGYGRLGHAEQKDEMVP 371
Query: 172 EQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
VK + P + G + VS G ++ WG
Sbjct: 372 RLVKLFDFPGR-GATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 237 GPH------GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 290
GPH G + + V +C AAH++L+T +G KLWSWGR G LG G T AP +
Sbjct: 136 GPHRYGCLSGVRVRTVVSGSC-AAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRL 193
Query: 291 V 291
+
Sbjct: 194 I 194
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Query: 183 LVSVDCGLFHTSVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 241
+VS C H+ ++++ G +WSWG EKG L + +P LI
Sbjct: 151 VVSGSCAA-HSLLITTEGKLWSWGRNEKG-------QLGHGDTKRVEAPRLI-----EAL 197
Query: 242 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF-APAIVLW--PPLTE 298
+ V ACG HT+ +TD G ++++G + G LG G D +PA +++ P+T+
Sbjct: 198 SHEAIVLAACGRNHTLALTDTG-SVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITK 256
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 49/255 (19%)
Query: 57 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 116
TVV +C + H + + + G+ + SWG N GQLG GD + P++IE +
Sbjct: 151 RTVVSGSCAA-HSLLITTEGKLW--------SWGRNEKGQLGHGDTKRVEAPRLIEGLSH 201
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
+ + CG HT LT + FG + GQLG G Q+ VP +
Sbjct: 202 E---VIVSAACGRNHTLALTE--------TGSVFAFGENKMGQLGLG-NQTDAVPSPAQI 249
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN-ASLTRNEAGDAIS------ 229
+ + + CG + ++ G+++S+G CP L N G I+
Sbjct: 250 MYNGQPITKMACGAEFSMIMDCKGNLYSFG-------CPEYGQLGHNSDGKFIARAQRIE 302
Query: 230 ----------PILI--SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGV 276
I I + +G P V+ VACGA HT LV D +++SWG G G
Sbjct: 303 YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGR 361
Query: 277 LGTGKTIDFFAPAIV 291
LG + D P +V
Sbjct: 362 LGHAEQKDEMVPRLV 376
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 83/217 (38%), Gaps = 45/217 (20%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
SL I G LW WG + G P + +V ACG H +AL
Sbjct: 162 SLLITTEGKLWSWGR---NEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 74 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 133
G + ++G N GQLGLG++ + P + P + ++ CG+ +
Sbjct: 219 ETGSVF--------AFGENKMGQLGLGNQTDAV-PSPAQIMYNGQP--ITKMACGAEFSM 267
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTT------------QSALVPEQV------- 174
++ + ++FG E GQLGH + LVP +V
Sbjct: 268 IMD--------CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKT 319
Query: 175 ---KELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
+ LP V + V CG HT V+ S V+SWG
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 356
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 45/227 (19%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKV 62
I S G +LA+ G+++ +G + + G + PSP ++G + K+
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGE----NKMGQLGLGNQTDAVPSPAQIMYNGQPITKM 259
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG------------DRESRLRPKI 110
ACG+E + + G Y S+G GQLG + + L P+
Sbjct: 260 ACGAEFSMIMDCKGNLY--------SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRR 311
Query: 111 IETFNQDSP---------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
+ F + + V +V CG+ HT +L +KR +++G G G+LG
Sbjct: 312 VAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKR--------VFSWGFGGYGRLG 363
Query: 162 HGTTQSALVPEQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
H + +VP VK + P + G + VS G ++ WG
Sbjct: 364 HAEQKDEMVPRLVKLFDFPGR-GASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 237 GPH------GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 290
GPH G + + V +C AAH++L+T +G KLWSWGR G LG G T AP +
Sbjct: 138 GPHRYGCLAGVRVRTVVSGSC-AAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRL 195
Query: 291 V 291
+
Sbjct: 196 I 196
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 122/299 (40%), Gaps = 43/299 (14%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G +++WG+ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSF----RDNNGVIGLLEPMKKSMVPVQVQLDAPVV 175
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 111
KVA G++H+V L + G+ Y L C G AN G+ GLG R R ++
Sbjct: 176 KVASGNDHLVMLTNDGDLYT---LGCGEQGQLGRVPELFANRGGRQGLG-RLLVPRCVLL 231
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
++ + CG++ T ++ E + FGL QLG T S +P
Sbjct: 232 KSRGTRGRVRFQDAFCGAYFTFAISR--------EGHVYGFGLSNYHQLGTPGTGSCFIP 283
Query: 172 EQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS- 229
+ + V G HT + S G +S LG L E + S
Sbjct: 284 QNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS------LGRAEYGRLGLGEGAEEKSI 337
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 288
P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D ++P
Sbjct: 338 PTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQDEDAWSP 388
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 140 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 199
R ++ + T G G+ GQLG G +S L ++ +P +V + G HT +S +
Sbjct: 28 RSHNTEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQS 85
Query: 200 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 259
G V+S+G L + S+ +E ++ G K VQV+ G +HT +
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDSHTAAL 134
Query: 260 TDDGYKLWSWG--RGRSGVLG 278
T+DG +++ WG R +GV+G
Sbjct: 135 TEDG-RVFLWGSFRDNNGVIG 154
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 30/189 (15%)
Query: 10 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV--VKVACGSE 67
G + AI G ++ +G L + G S F P + F T V + G
Sbjct: 248 GAYFTFAISREGHVYGFG---LSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQH 304
Query: 68 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVYEVT 126
H V + S G+ YS G G+LGLG+ E + P +I V V
Sbjct: 305 HTVCMDSEGK--------AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP-----VVSSVA 351
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV--KELPQYVYLV 184
CG+ ++ R + +G+G N QLG G + A P ++ K+L V L
Sbjct: 352 CGASVGYAVSKDGR--------VFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVL- 402
Query: 185 SVDCGLFHT 193
+V G HT
Sbjct: 403 TVSSGGQHT 411
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 65/297 (21%)
Query: 3 QICSVKAG--GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 60
Q+ SV +G SL I G LW WG D G + P + G V
Sbjct: 140 QVRSVASGSCAAHSLLITVEGKLWSWGR---NDKGQLGHGDIKRIDVPKLIESLKGEVFV 196
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
ACG H +AL G Y ++G N GQLGLG++ + P + P
Sbjct: 197 HAACGRNHTLALTENGSVY--------AFGENKMGQLGLGNKTDAV-PSPAQILYNGQP- 246
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---------------- 164
+ +V CG+ + ++ + ++FG E GQLGH +
Sbjct: 247 -ITKVACGAEFSMIMD--------CKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCE 297
Query: 165 ---TQSALVPEQVKE---LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 217
+ A+ E+ K+ LP V + + CG+ H+ ++ S V+SWG G G
Sbjct: 298 LIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGF-GGYG----- 351
Query: 218 SLTRNEAGDAISPILISGNGPHGPKFQDP----VQVACGAAHTVLVTDDGYKLWSWG 270
L +E D + P L+ F P Q+ GA + V++ G L+ WG
Sbjct: 352 RLGHSEQRDEMVPRLVK-------LFDFPGRGAAQIYAGATCSFAVSEMG-GLFFWG 400
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 122 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 179
V V GS H+ L+T +E W++G + GQLGHG + VP+ ++ L
Sbjct: 141 VRSVASGSCAAHSLLIT--------VEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKG 192
Query: 180 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISG 235
V+ V CG HT ++ G V+++G K GLG N+ SP I
Sbjct: 193 EVF-VHAACGRNHTLALTENGSVYAFGENKMGQLGLG---------NKTDAVPSPAQILY 242
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 289
NG Q +VACGA ++++ G L+S+G G LG + A A
Sbjct: 243 NG------QPITKVACGAEFSMIMDCKG-NLYSFGCPEYGQLGHNSDGKYIARA 289
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 237 GPHGPKFQDPVQV---ACG--AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
GPH VQV A G AAH++L+T +G KLWSWGR G LG G P ++
Sbjct: 129 GPHRYGCLTGVQVRSVASGSCAAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKLI 187
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 27/167 (16%)
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 208
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ +S GD++ WG E
Sbjct: 183 FSWGAGRHGQLGHGTLEAELEPRLLEAL-QGLRMAKVAAGGWHSVCLSETGDIYIWGWNE 241
Query: 209 KGLGLCPNASLTRNEA-------------------GDAISPILISGNGPHG-----PKFQ 244
G P S T N+A DA +P P P
Sbjct: 242 SGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGS 301
Query: 245 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
D V +CG+ HT +VT G +L++WG G+ G LG + P V
Sbjct: 302 DAVMASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHKDSTSLDRPCCV 347
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G V +CGS H + GE Y +WG GQLG D S RP +E F
Sbjct: 300 GSDAVMASCGSRHTAVVTRTGELY--------TWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 116 QDSPWAVYEVTCGSFHT 132
+ V VTCG ++T
Sbjct: 352 ERQ-LEVRAVTCGPWNT 367
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 53/233 (22%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 62
++ ++ G L + AG ++ WG G +L + P + G + KV
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAG---RHGQLGHGTLEAELEPRLLEALQGLRMAKV 218
Query: 63 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQD-- 117
A G H V L G+ Y WG N +GQL L R E++ + N+D
Sbjct: 219 AAGGWHSVCLSETGDIYI--------WGWNESGQLALPTRSGTENKAEREEATELNEDGL 270
Query: 118 ----------SPWAVYEV------------------TCGSFHTALLTHRKRPNDMLESMC 149
+P + +CGS HTA++T R ++
Sbjct: 271 KEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT---RTGEL----- 322
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVYLVSVDCGLFHTSVVSSAGD 201
+T+G G+ GQLGH + S P V+ + + + + +V CG ++T V + D
Sbjct: 323 YTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMERD 375
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G ++S+ P+++E F + + V C FH+ L+ + +
Sbjct: 146 YTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLC-KFHSVFLSQKGQ------ 198
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G+ G+LGHG + LVP V+ L + V HT V++ G V+++G
Sbjct: 199 --VYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHP-CTQVAGAKDHTVVLTEDGYVYTFG 255
Query: 207 ME--KGLGL---CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
+ LG+ PN+++ R + + G VA G HTVL T
Sbjct: 256 LNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLG-------------VAAGRFHTVLWTK 302
Query: 262 DGYKLWSWGRGRSGVL 277
D G+ G L
Sbjct: 303 DAVYTVGLNGGQLGYL 318
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 29/169 (17%)
Query: 43 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 102
++ P V GH +VA +H V L ED Y++G N QLG+
Sbjct: 216 LTCLVPRLVEGLRGHPCTQVAGAKDHTVVLT--------EDGYVYTFGLNTFHQLGIQPP 267
Query: 103 ESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
P+ I+ V V G FHT L T + +T GL GQLG
Sbjct: 268 PPNSNVPRQIQAKTMKGK-TVLGVAAGRFHTVLWT---------KDAVYTVGLN-GGQLG 316
Query: 162 H----GTTQSALVPEQVKELPQY---VYLVSVDCGLFHTSVVSSAGDVW 203
+ + P QV L + LVS G T VS GD++
Sbjct: 317 YLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGA--TVCVSERGDIY 363
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ + +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQ------ 197
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 198 --VYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 207 ME--KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
+ LG+ P S P I G + + VA G HTVL T +
Sbjct: 255 LNIFHQLGIIPPPSSCN-------VPRQIQAKYLKG---RTIIGVAAGRFHTVLWTREAV 304
Query: 265 KLWSWGRGRSGVL 277
G+ G L
Sbjct: 305 YTMGLNGGQLGCL 317
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 48 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-- 105
P V G +V KV+CGS+ V + G+ YS+G++ G LG+
Sbjct: 399 PKHVEKLQGKSVQKVSCGSDFTVCITDEGQL--------YSFGSDYYGCLGVNQSAGSEV 450
Query: 106 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 165
L P +++ F + V +V+CG H LT K +++G GE G+LG +
Sbjct: 451 LEPLLVDFFLNE---PVDQVSCGDSHIMALTRSKS--------VYSWGCGEYGRLGLDSE 499
Query: 166 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN---ASLTRN 222
P++V E+ + + +V+V CG + +++ G V + G+ + L N A + +
Sbjct: 500 DDVYSPQKV-EVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558
Query: 223 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
EA + P S F ++ G HT + + G +L ++G + G LG G
Sbjct: 559 EAFQEV-PYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERG-RLLTFGSNKCGQLGVG 614
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 24/188 (12%)
Query: 108 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGT 164
P+ ++ F W +V G H A++T K E W G +GQLGHG
Sbjct: 341 PQKLDVFK--GGWRARQVCAGDAHFAVVTVEK------ELYTWVNMQGGSKLHGQLGHGD 392
Query: 165 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 224
S P+ V++L Q + V CG T ++ G ++S+G + L N S
Sbjct: 393 RASYRQPKHVEKL-QGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQS----AG 447
Query: 225 GDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 283
+ + P+L+ +PV QV+CG +H + +T ++SWG G G LG
Sbjct: 448 SEVLEPLLVDFF------LNEPVDQVSCGDSHIMALTRSK-SVYSWGCGEYGRLGLDSED 500
Query: 284 DFFAPAIV 291
D ++P V
Sbjct: 501 DVYSPQKV 508
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 100/270 (37%), Gaps = 44/270 (16%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVVKVA 63
V G +A+ + +++ WG G L S ++P V G +V V
Sbjct: 467 VSCGDSHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVC 520
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL----------RPKIIET 113
CGS+ L T G+ L C G N + +LGL + + +
Sbjct: 521 CGSDGSFLL-----TLTGKVLAC---GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTL 572
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 173
Q S + + ++ G HTA + R R TFG + GQLG G + L
Sbjct: 573 AKQLSFYKIRSISPGRTHTAAIDERGR--------LLTFGSNKCGQLGVGDYRKHLGINL 624
Query: 174 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPI 231
+ ++ V CG T+ ++ +++WG L + PN R + D I
Sbjct: 625 LGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNE---RPQGSD----I 677
Query: 232 LISGNGPHGPKFQDPVQVACGAAHTVLVTD 261
S P ++C HT+L+ +
Sbjct: 678 CTSWPRPIFGSLHHVTDLSCRGWHTILIVE 707
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 117/296 (39%), Gaps = 53/296 (17%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 60
I V G ++ + + G L+ +G+ D G VS P + F + V
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 483
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+V+CG HVV L E Y SWG G+LGL E P+ + D P
Sbjct: 484 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQRV-----DVPK 530
Query: 121 A--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKEL 177
A + V CG T LLT + GL E +LG S ++ E E+
Sbjct: 531 ALIIVAVQCGCDGTFLLTQSGK--------VLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 178 P-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
P + + ++ G HT+ + G + ++G K C + +
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRL 638
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
I+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 639 GINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 687
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 75/315 (23%)
Query: 30 PLPDSSTEGGFSLVSSFTPSP-VWDFHGHT-----VVKVACGSEHVVALVSAGETYKGED 83
P + TE ++V+S T VW T V+K C + V A G T+
Sbjct: 329 PRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA----GNTHFAVV 384
Query: 84 LV---CYSW-----GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 135
V Y+W G +GQLG GD+ S +PK +E A+++V+CG T +
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK---AIHQVSCGDDFTVCV 441
Query: 136 T------------------HRKRPNDMLESM----------------------------C 149
T + ++LE M
Sbjct: 442 TDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEV 501
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G GE G+LG + + P++V ++P+ + +V+V CG T +++ +G V + G+ +
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQRV-DVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 210 ----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
GL C + + +EA + P S F +A G HT + + G +
Sbjct: 561 FNKLGLNQC-MSGIINHEAYHEV-PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERG-R 617
Query: 266 LWSWGRGRSGVLGTG 280
L ++G + G LG G
Sbjct: 618 LLTFGCNKCGQLGVG 632
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGTTQSALVPEQVKELPQY 180
+V G+ H A++T K E W G +GQLGHG S P+ V++L Q
Sbjct: 373 QVCAGNTHFAVVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QG 425
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
+ V CG T V+ G ++++G + + + + + + P+ ++
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCM----GVDKVSGPEVLEPMQLNFF---- 477
Query: 241 PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+PV QV+CG H V++T + +++SWG G G LG D++ P V P
Sbjct: 478 --LSNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTPQRVDVP 529
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 21/113 (18%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
VV+VACG H V L AGE Y++G+N GQLG GD + P ++
Sbjct: 968 VVQVACGLHHTVVLTLAGEV--------YTFGSNQYGQLGSGDLQPVSGPVRVQV----- 1014
Query: 119 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
P A+ +V GS HT LLT + M +TFG + GQLG + L P
Sbjct: 1015 PGAISQVAAGSNHTVLLTSK--------GMVYTFGNYQKGQLGRLPSDYGLKP 1059
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 102 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 161
R + L P++++ SP V +V CG HT +LT L +TFG + GQLG
Sbjct: 951 RVAPLAPQLLQ-LTSSSP--VVQVACGLHHTVVLT--------LAGEVYTFGSNQYGQLG 999
Query: 162 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASL 219
G Q P +V ++P + V+ G HT +++S G V+++G +KG LG P+
Sbjct: 1000 SGDLQPVSGPVRV-QVPGAISQVAA--GSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYG 1056
Query: 220 TRNEAGDAISPI 231
+ D SP+
Sbjct: 1057 LKPPPQDDDSPV 1068
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
Query: 134 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 193
L+ RK LE+ G L + A + Q+ +L +V V CGL HT
Sbjct: 919 LIMRRKERKGELETGAAGGGAATPTDLDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHT 978
Query: 194 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP---VQVA 250
V++ AG+V+++G N+ G S L +GP + Q P QVA
Sbjct: 979 VVLTLAGEVYTFG--------------SNQYGQLGSGDLQPVSGP--VRVQVPGAISQVA 1022
Query: 251 CGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
G+ HTVL+T G ++++G + G LG
Sbjct: 1023 AGSNHTVLLTSKGM-VYTFGNYQKGQLG 1049
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 151 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EK 209
++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 181 SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLTMAEVAAGGWHSVCVSETGDIYIWGWNES 239
Query: 210 GLGLCPNASLTR------------NEAGDAISPILISGNGPHGPKF-------------- 243
G P +L NE G + +G P
Sbjct: 240 GQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLG 299
Query: 244 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 303
D V+V+CG+ HT +VT G +L++WG G+ G LG T WP E F
Sbjct: 300 SDAVKVSCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLD------WPRRVEYFVDK 352
Query: 304 ELNT 307
+L
Sbjct: 353 QLQV 356
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 56/186 (30%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ G+EH + L +AG+ + SWG +GQLG G E+ L P+++E +
Sbjct: 162 QLELGAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEALQGLT-- 211
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE-------- 172
+ EV G +H+ ++ D+ + +G E+GQL T A E
Sbjct: 212 -MAEVAAGGWHSVCVSET---GDI-----YIWGWNESGQLALPTRNLAEDGETVAREATG 262
Query: 173 ------QVK-----------------------ELPQYVYLVSVDCGLFHTSVVSSAGDVW 203
QVK +LP V V CG HT+VV+ G+++
Sbjct: 263 LNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELY 322
Query: 204 SWGMEK 209
+WG K
Sbjct: 323 TWGWGK 328
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 55/227 (24%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
++ G +L +D AG ++ WG G +L + P + G T+ +VA G
Sbjct: 163 LELGAEHALLLDAAGQVFSWGGG---RHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGG 219
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE----------------------- 103
H V + G+ Y WG N +GQL L R
Sbjct: 220 WHSVCVSETGDIYI--------WGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVK 271
Query: 104 --SRLRPKIIETFNQDSPWAVY----------EVTCGSFHTALLTHRKRPNDMLESMCWT 151
R+ F P+ +V+CGS HTA++T R ++ +T
Sbjct: 272 RTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT---RTGEL-----YT 323
Query: 152 FGLGENGQLGHGTTQSALVPEQVKE-LPQYVYLVSVDCGLFHTSVVS 197
+G G+ GQLGH T S P +V+ + + + + +V CG ++T V +
Sbjct: 324 WGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G VKV+CGS H + GE Y+WG GQLG D S P+ +E F
Sbjct: 299 GSDAVKVSCGSRHTAVVTRTGE--------LYTWGWGKYGQLGHEDTTSLDWPRRVEYFV 350
Query: 116 QDSPWAVYEVTCGSFHTALLTHRK 139
D V VTCG ++T + K
Sbjct: 351 -DKQLQVKAVTCGPWNTYVYAVEK 373
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMW-------GNCPLPDSSTEGGFSLVSSFTPSPVWDF 54
+++ V G + + +G L W G LP + + +S F
Sbjct: 340 TEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQ---- 395
Query: 55 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 114
G T+ V+CG L G + ++G+ +NG LG G+ +PKI+E
Sbjct: 396 SGVTIKSVSCGDLFTTCLTDRG--------IIMTFGSGSNGCLGHGNFNDVTQPKIVEAL 447
Query: 115 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 174
+ + +V+CG+ H +T+ E +++G G+NG+LG T S P+QV
Sbjct: 448 ---LGYELVQVSCGASHVLAVTN--------EREVFSWGRGDNGRLGLATQDSHNCPQQV 496
Query: 175 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPIL 232
LP V CG+ + ++S+ + + G + LGL + + + +
Sbjct: 497 -SLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVH 555
Query: 233 ISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
+ P + V + G AH+V VT+ G + +++G + G LG
Sbjct: 556 LFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKG-QCFTFGSNQHGQLG 601
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 125/302 (41%), Gaps = 52/302 (17%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 63
I SV G + + + + G + +G+ G F+ V+ P V G+ +V+V+
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGS-NGCLGHGNFNDVTQ--PKIVEALLGYELVQVS 456
Query: 64 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 123
CG+ HV+A+ + E + SWG +NG+LGL ++S P+ + + +
Sbjct: 457 CGASHVLAVTNEREVF--------SWGRGDNGRLGLATQDSHNCPQQVSL---PADFEAQ 505
Query: 124 EVTCG--------SFHTALLTHRKRPNDM-LESMCWT-----FGLGENGQLGHGTTQSAL 169
V CG + H L R N + L+ + T F E L + L
Sbjct: 506 RVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPL 565
Query: 170 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 229
E++ V +D G H+ V+ G +++G + + L + +
Sbjct: 566 NTEKI---------VYIDIGTAHSVAVTEKGQCFTFGSNQ------HGQLGCSHRRSSRV 610
Query: 230 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 289
P +SG Q ACG A T+ + +G ++++WG+G G LG K DF P
Sbjct: 611 PYQVSG-------LQGITMAACGDAFTLAIGAEG-EVYTWGKGARGRLGR-KEEDFGIPK 661
Query: 290 IV 291
V
Sbjct: 662 PV 663
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 117/296 (39%), Gaps = 53/296 (17%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 60
I V G ++ + + G L+ +G+ D G V+ P + F + V
Sbjct: 428 IRQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVAGPEVLEPMQLNFFLSNPVE 483
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
+V+CG HVV L E Y SWG G+LGL E P+ + D P
Sbjct: 484 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKV-----DVPK 530
Query: 121 A--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKEL 177
A + V CG T LLT + GL E +LG S ++ E E+
Sbjct: 531 ALIIVAVQCGCDGTFLLTQSGK--------VLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 178 P-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 226
P + + ++ G HT+ + G + ++G K C + +
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRL 638
Query: 227 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 282
I+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 639 GINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 687
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 75/315 (23%)
Query: 30 PLPDSSTEGGFSLVSSFTPSP-VWDFHGHT-----VVKVACGSEHVVALVSAGETYKGED 83
P + TE ++V+S T VW T V+K C + V A G T+
Sbjct: 329 PRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA----GNTHFAVV 384
Query: 84 LV---CYSW-----GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 135
V Y+W G +GQLG GD+ S +PK +E A+ +V+CG T +
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK---AIRQVSCGDDFTVCV 441
Query: 136 THRKR------------------PNDMLESM----------------------------C 149
T + ++LE M
Sbjct: 442 TDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEV 501
Query: 150 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 209
+++G GE G+LG + + P++V ++P+ + +V+V CG T +++ +G V + G+ +
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQKV-DVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 210 ----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 265
GL C + + +EA + P S F +A G HT + + G +
Sbjct: 561 FNKLGLNQC-MSGIINHEAYHEV-PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERG-R 617
Query: 266 LWSWGRGRSGVLGTG 280
L ++G + G LG G
Sbjct: 618 LLTFGCNKCGQLGVG 632
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 124 EVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGTTQSALVPEQVKELPQY 180
+V G+ H A++T K E W G +GQLGHG S P+ V++L Q
Sbjct: 373 QVCAGNTHFAVVTVEK------ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QG 425
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 240
+ V CG T V+ G ++++G + + + + + + P+ ++
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCM----GVDKVAGPEVLEPMQLNFF---- 477
Query: 241 PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 294
+PV QV+CG H V++T + +++SWG G G LG D++ P V P
Sbjct: 478 --LSNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTPQKVDVP 529
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 125/303 (41%), Gaps = 52/303 (17%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 60
++ V AG + A+ G ++++G+ G L+ S PV V+
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFGSF----RDNNGVIGLLEPMKKSMVPVQVQINTPVI 181
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG--------LGDR---ESRLRPK 109
K+A G++H+V L G+ Y+ G GQLG G R E L P+
Sbjct: 182 KIASGNDHLVLLTVDGD--------LYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQ 233
Query: 110 IIETFNQDSPWAVYE-VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 168
I + S ++ V CG++ T ++ E + FGL QLG TQ+
Sbjct: 234 CIHLKAKGSGRVHFQDVFCGAYFTFAVSQ--------EGHVYGFGLSNYHQLGTKNTQAC 285
Query: 169 LVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAG 225
P+ + + G HT V S G +S G E G LGL NA E
Sbjct: 286 YAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENA-----EEQ 340
Query: 226 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 285
+PI P PK VA GA+ + V+ DG +++WG G + LGTG+ D
Sbjct: 341 SEPTPI------PDLPKINS---VASGASVSYAVSTDGC-VFAWGMGTNLQLGTGEEEDV 390
Query: 286 FAP 288
++P
Sbjct: 391 WSP 393
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 84/330 (25%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT---V 59
+I + G + S I + G L+ +G+ L G +L S +P V F V
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLL---GKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 60 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 119
V +A G +H +AL G+ Y SWG N++ QLGLG+ S + + N +
Sbjct: 246 VSIANGGKHSLALTICGKVY--------SWGGNDSCQLGLGNGSSSSYYSLPQLINFNIS 297
Query: 120 WA----------------------------------------VYEVTCGSFHTALLTHRK 139
+ + +++CG+ +A++T +
Sbjct: 298 YNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDK- 356
Query: 140 RPNDMLESMCWTFGLGENGQLGHGTTQSALV---PEQVKELPQYVYLVSVDCGLFHTSVV 196
+ +TFG G++G+LG G QS L+ P+ V+ L Q +++ + G H+ V+
Sbjct: 357 -------GLLFTFGRGDHGRLGLGE-QSLLMQSTPKLVQSL-QGHFIIDMSSGGGHSLVL 407
Query: 197 SSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV---QV 249
++ G V+S+G + G+G N P I + Q P+ +V
Sbjct: 408 TNKGLVFSFGRNDQGQLGIGCFSNQQTI---------PKQIQWFQTSQQQQQQPINIIKV 458
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
+ G H++ ++D+ ++WGR GVLGT
Sbjct: 459 SAGGYHSIAISDNN-DTYAWGRSDYGVLGT 487
Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 27/184 (14%)
Query: 38 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 97
G SL+ TP V GH ++ ++ G H + L + G + +S+G N+ GQL
Sbjct: 373 GEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKG--------LVFSFGRNDQGQL 424
Query: 98 GLGD-RESRLRPKII-----ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 151
G+G + PK I Q P + +V+ G +H+ ++ D ++ W
Sbjct: 425 GIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAIS------DNNDTYAW- 477
Query: 152 FGLGENGQLG-----HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
G + G LG G ++ + V + V G H +S G ++SWG
Sbjct: 478 -GRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWG 536
Query: 207 MEKG 210
G
Sbjct: 537 CNAG 540
Score = 41.2 bits (95), Expect = 0.014, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 20/145 (13%)
Query: 4 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK-- 61
I V AGG S+AI + + WG D G V PV VV
Sbjct: 455 IIKVSAGGYHSIAISDNNDTYAWGR---SDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV 511
Query: 62 ----VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
V+ G +H VA+ G Y SWG N +LG E++L PK ++D
Sbjct: 512 KFIDVSSGFQHNVAMSIDGSLY--------SWGCNAGQRLGFKSDENQLTPKKCFINSKD 563
Query: 118 SPWAVYEVTCGSFHTALLTHR-KRP 141
S ++ TCG T ++ R K P
Sbjct: 564 SKPLLF--TCGEIITIIVEKRFKEP 586
Score = 41.2 bits (95), Expect = 0.015, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 112 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 171
E +NQ + ++ G+ H++ +T + +TFG G G+LGHG +S P
Sbjct: 183 EMYNQQK---IVLISTGAIHSSFITD--------QGNLYTFGDGLLGKLGHGNLESYSSP 231
Query: 172 EQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
+ V+ + + +VS+ G H+ ++ G V+SWG
Sbjct: 232 KLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWG 268
Score = 35.4 bits (80), Expect = 0.89, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 106/271 (39%), Gaps = 72/271 (26%)
Query: 54 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 113
++ +V ++ G+ H + G Y ++G G+LG G+ ES PK++E
Sbjct: 185 YNQQKIVLISTGAIHSSFITDQGNLY--------TFGDGLLGKLGHGNLESYSSPKLVEF 236
Query: 114 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQSALV 170
F V + G H+ LT + +++G ++ QLG G + +
Sbjct: 237 FQTKPSLRVVSIANGGKHSLALT--------ICGKVYSWGGNDSCQLGLGNGSSSSYYSL 288
Query: 171 PEQVKELPQY---------------------------------------VYLVSVDCGLF 191
P+ + Y + +V + CG
Sbjct: 289 PQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTN 348
Query: 192 HTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 249
++V++ G ++++G + G LGL + L ++ +P L+ H + +
Sbjct: 349 RSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS------TPKLVQSLQGHF-----IIDM 397
Query: 250 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ G H++++T+ G ++S+GR G LG G
Sbjct: 398 SSGGGHSLVLTNKGL-VFSFGRNDQGQLGIG 427
Score = 33.1 bits (74), Expect = 4.6, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 244 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
Q V ++ GA H+ +TD G L+++G G G LG G + +P +V
Sbjct: 188 QKIVLISTGAIHSSFITDQG-NLYTFGDGLLGKLGHGNLESYSSPKLV 234
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 29/168 (17%)
Query: 151 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EK 209
++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 181 SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMAEVAAGGWHSVCVSETGDIYIWGWNES 239
Query: 210 GLGLCPNASLTR------------NEAGDAISPILISGNGPHGPKF-------------- 243
G P +L NE G + + +G P
Sbjct: 240 GQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMG 299
Query: 244 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
D V+ +CG+ HT +VT G +L++WG G+ G LG T P V
Sbjct: 300 SDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRPRRV 346
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 56/186 (30%)
Query: 61 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 120
++ G+EH + L +AG+ + SWG +GQLG G E+ L P+++E
Sbjct: 162 QLELGAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEALQG---L 210
Query: 121 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE-------- 172
+ EV G +H+ ++ D+ + +G E+GQL T A E
Sbjct: 211 VMAEVAAGGWHSVCVSET---GDI-----YIWGWNESGQLALPTRNLAEDGETVAREATE 262
Query: 173 ------QVK-----------------------ELPQYVYLVSVDCGLFHTSVVSSAGDVW 203
QVK +LP V CG HT+VV+ G+++
Sbjct: 263 LNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELY 322
Query: 204 SWGMEK 209
+WG K
Sbjct: 323 TWGWGK 328
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 56 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 115
G VK +CGS H + GE Y+WG GQLG D S RP+ +E F
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGE--------LYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 116 QDSPWAVYEVTCGSFHTALLTHRK 139
D V VTCG ++T + K
Sbjct: 351 -DKQLQVKAVTCGPWNTYVYAVEK 373
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 55/224 (24%)
Query: 10 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 69
G +L +D AG ++ WG G +L + P + G + +VA G H
Sbjct: 166 GAEHALLLDAAGQVFSWGGG---RHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 70 VALVSAGETYKGEDLVCYSWGANNNGQLGL--------GDRESRLRPKIIETFNQ----- 116
V + G+ Y WG N +GQL L G+ +R ++ E +Q
Sbjct: 223 VCVSETGDIYI--------WGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTG 274
Query: 117 --------------------DSPWA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 154
D P + +CGS HTA++T R ++ +T+G
Sbjct: 275 GAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVT---RTGEL-----YTWGW 326
Query: 155 GENGQLGHGTTQSALVPEQVKE-LPQYVYLVSVDCGLFHTSVVS 197
G+ GQLGH T S P +V+ + + + + +V CG ++T V +
Sbjct: 327 GKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GF---SLVSSFTPSPVWDFHGH 57
++ + A MS A+ + G ++ WG EG GF + TP V F +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF----RCNEGILGFYQDKIKIQKTPWKVPTFSKY 221
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 117
+V++A G +H++ L G + ++WG QLG E R R K ++
Sbjct: 222 NIVQLAPGKDHILFLDEEG--------MVFAWGNGQQNQLGRKVME-RFRLKTLDP---- 268
Query: 118 SPWAVYEV---TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPE 172
P+ + V G H LT + N ++ ++GL + GQ G ALV +
Sbjct: 269 RPFGLRHVKYIASGENHCFALT---KDNKLV-----SWGLNQFGQCGVSEDVEDGALVTK 320
Query: 173 QVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDA 227
+ LP V + S+ G H+ ++S GD++S G E G+ T +
Sbjct: 321 PKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGK 380
Query: 228 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 280
+ + + PKF+ VA G+ H+V V +G +SWG G + +G G
Sbjct: 381 ARAVPLPTKLNNVPKFK---SVAAGSHHSVAVAQNGIA-YSWGFGETYAVGLG 429
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 43/283 (15%)
Query: 7 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 66
V G + + + + G + +G+ + G +L P+ V G+ +V+VACG+
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSG---SNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 67 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 126
HV+AL + GE ++WG + G+LGLG RES P+ + V
Sbjct: 459 SHVLALSTDGEL--------FAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE---AQRVV 507
Query: 127 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELPQYV---- 181
CG + +LT P +L C + + G L H + VP +QV+E +
Sbjct: 508 CGIDSSMILT---SPGRVLA--CGSNRFNKLG-LDHLSLDEEPVPYQQVEEALSFTPLGS 561
Query: 182 ------YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 235
L+ VD G H++ ++++GD +++G + + L + + +P + G
Sbjct: 562 APLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQ------HGQLGTSSRRVSRAPCRVQG 615
Query: 236 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
G K V VACG A TV V +G +++SWG+G G LG
Sbjct: 616 L--EGIKM---VMVACGDAFTVAVGAEG-EVYSWGKGTRGRLG 652
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 13 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS---SFTPSPVWDFHGHTVVKVACGSEHV 69
+ L ++ A+ G+C S+ G S S P V G +V VACG
Sbjct: 572 VDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFT 631
Query: 70 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 129
VA+ + GE Y SWG G+LG D ++ L P+ ++ ++ P+ V V+C
Sbjct: 632 VAVGAEGEVY--------SWGKGTRGRLGRRDEDAGL-PRPVQ-LDETHPYMVTSVSCCH 681
Query: 130 FHTAL 134
+T L
Sbjct: 682 GNTLL 686
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 248 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 291
VACG T +TD G + ++G G +G LG G D P IV
Sbjct: 401 HVACGDLFTACLTDRGI-IMTFGSGSNGCLGHGNLTDISQPTIV 443
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 110/273 (40%), Gaps = 79/273 (28%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 118
+ + +C SE V A V ++WGAN+ GQLGLG +E P+ + F Q
Sbjct: 1 MARESCASETVSAAA-----------VLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAG 49
Query: 119 PWAVYEVTCGSFHTALLT-------------------HRK-----------RPNDMLESM 148
+ VT G H+A++T H + R + +
Sbjct: 50 --CIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVA 107
Query: 149 C-WTFGL-----------GEN--GQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFH 192
C W F + G N GQLG HG + +VP+ ++ L + V V V GL H
Sbjct: 108 CGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG-PRKCVVPQAIECLREKV--VCVAAGLRH 164
Query: 193 TSVVSSAGDVWSWGM---EKGLGLCPNASLTRNEAGDAISPILISGNGPH---GPKFQDP 246
++ G V+ WG G LCP +L P+ ++ P G +
Sbjct: 165 ALATTATGSVFQWGTGLASSGRRLCPGQNL----------PLFLTAKEPSRVTGLENSTA 214
Query: 247 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
V G+ H+ +TD G +L+ WGR + G L +
Sbjct: 215 VCAVAGSDHSASLTDTG-ELYVWGRNKHGQLAS 246
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 52/218 (23%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP----VWDFHGH 57
+ +C+V AG S ++ + G L++WG + G + + F P P F
Sbjct: 213 TAVCAV-AGSDHSASLTDTGELYVWGR------NKHGQLASRAVFLPLPQRIEAHYFQDE 265
Query: 58 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQ 116
V V G H+VA G+ + +WG + GQLG RL P + + Q
Sbjct: 266 KVTAVWSGWTHLVAKTETGKVF--------TWGRADYGQLG-----RRLEPPEAQKPVEQ 312
Query: 117 DSPWA-----------------VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 159
DS A E++CGS H + K C ++G E+G
Sbjct: 313 DSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDK---------CCSWGWNEHGM 363
Query: 160 LGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVV 196
G GT + P V+ LP L+ V CG H+ V
Sbjct: 364 CGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAV 401
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 96/250 (38%), Gaps = 78/250 (31%)
Query: 87 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 146
++WGAN+ GQLGLG +E L + + F + + +T G H+A++T E
Sbjct: 18 FAWGANSYGQLGLGHKEDVLSAQQLSDFCKSG--CIKRITGGGGHSAVVTD--------E 67
Query: 147 SMCWTFGLGENGQLGHGTTQSALVPEQVKEL----------------------------- 177
+ GL ++GQLG G T+ L K L
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGS 127
Query: 178 -----------------PQYVYL-----VSVDCGLFHTSVVSSAGDVWSWGM---EKGLG 212
PQ + L VS+ GL H +++G V+ WG G
Sbjct: 128 NSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRR 187
Query: 213 LCPNASLTRNEAGDAISPILISGNGPH---GPKFQDPVQVACGAAHTVLVTDDGYKLWSW 269
LCP +L P+ ++ P G + V V G+ H+ +TD G +L+ W
Sbjct: 188 LCPGQTL----------PLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAG-ELYVW 236
Query: 270 GRGRSGVLGT 279
G + G L +
Sbjct: 237 GSNKHGQLAS 246
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 33/205 (16%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 61
SQ V AG S ++ +AG L++WG+ +++ F L+ + F +
Sbjct: 212 SQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARC--FQNEKIAA 269
Query: 62 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG--LGDRESRLRPKIIETFNQDSP 119
V G H+VA G+ ++WG + GQLG + RE K + P
Sbjct: 270 VWSGWTHLVAQTVTGKV--------FTWGRADYGQLGRTVETREGWESEKQDPSLPGSGP 321
Query: 120 W-----------AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 168
E++CGS H ++ +C ++G E+G G GT
Sbjct: 322 QKGTPSCLPCLTGATEISCGSEHNLA---------VIGGVCHSWGWNEHGMCGDGTEADV 372
Query: 169 LVPEQVKELPQYVYLVSVDCGLFHT 193
P+ V L ++ + V CG H+
Sbjct: 373 WAPKPVPGL-RFFLGLHVGCGAGHS 396
Score = 38.5 bits (88), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 104/287 (36%), Gaps = 71/287 (24%)
Query: 3 QICSVKAGGMMSLAIDNAGALWMWGN---------CP---LPDSSTEGGFSLVSSFTPSP 50
++ S+ AG +LA +G ++ WG CP LP +++ PS
Sbjct: 154 KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLP--------LFLTAKEPST 205
Query: 51 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 110
V V V GS+H +L AGE Y WG+N +GQL L P+
Sbjct: 206 VTGLENSQAVCVLAGSDHSASLTDAGEL--------YVWGSNKHGQLA-SQAAFLLLPQR 256
Query: 111 IET--FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH------ 162
IE F + AV+ G H T + +T+G + GQLG
Sbjct: 257 IEARCFQNEKIAAVWS---GWTHLVAQT--------VTGKVFTWGRADYGQLGRTVETRE 305
Query: 163 ---GTTQSALVPEQVKE------LPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLG 212
Q +P + LP + CG H +V+ W W G
Sbjct: 306 GWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEH---G 362
Query: 213 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 259
+C + + D +P + G +F + V CGA H++ +
Sbjct: 363 MCGDGT-----EADVWAPKPVPGL-----RFFLGLHVGCGAGHSLAL 399
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 97/252 (38%), Gaps = 47/252 (18%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP----KIIETF 114
VV +A G H +A ++G ++ WG GL RL P + T
Sbjct: 155 VVSIAAGLRHALAATASGTVFQ--------WGT------GLASSGRRLCPGQTLPLFLTA 200
Query: 115 NQDSPWAVYE------VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 168
+ S E V GS H+A LT D E W G ++GQL +Q+A
Sbjct: 201 KEPSTVTGLENSQAVCVLAGSDHSASLT------DAGELYVW--GSNKHGQL---ASQAA 249
Query: 169 --LVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 225
L+P++++ Q + +V G H + G V++WG L
Sbjct: 250 FLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWES 309
Query: 226 DAISPILISGNGPHG------PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 279
+ P L G+GP P +++CG+ H + V G SWG G+ G
Sbjct: 310 EKQDPSL-PGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI--GGVCHSWGWNEHGMCGD 366
Query: 280 GKTIDFFAPAIV 291
G D +AP V
Sbjct: 367 GTEADVWAPKPV 378
>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens
GN=MYCBP2 PE=1 SV=3
Length = 4640
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 37 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 96
E S ++++ P V V+V+CG H V L+ G+ Y ++G +GQ
Sbjct: 882 EKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVY--------TFGYGQHGQ 933
Query: 97 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 156
LG GD SR P +++ P +VT GS HTA+L +++ +TFG
Sbjct: 934 LGHGDVNSRGCPTLVQAL----PGPSTQVTAGSNHTAVL--------LMDGQVFTFGSFS 981
Query: 157 NGQLG 161
GQLG
Sbjct: 982 KGQLG 986
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 117 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 176
D +V+CG H+ +L M +TFG G++GQLGHG S P V+
Sbjct: 899 DCELRAVQVSCGFHHSVVL--------MENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 950
Query: 177 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
LP V G HT+V+ G V+++G
Sbjct: 951 LPGPS--TQVTAGSNHTAVLLMDGQVFTFG 978
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 14 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 73
S I G L+M+G + S + S V D GH V +VA G H L+
Sbjct: 612 SSVISKDGELYMFGK------------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLM 659
Query: 74 SAGETYKGEDLVCYSWGANNNGQLG 98
GE +++G NN GQ G
Sbjct: 660 KNGEV--------WTFGVNNKGQCG 676
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 184 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPK 242
V V CG H+ V+ GDV+++G + + L + P L+ GP
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQ------HGQLGHGDVNSRGCPTLVQALPGPS--- 955
Query: 243 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 278
QV G+ HT ++ DG +++++G G LG
Sbjct: 956 ----TQVTAGSNHTAVLLMDG-QVFTFGSFSKGQLG 986
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 181 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN--------ASLTRNEAGDAISPIL 232
+ +VSV CG+ H+ +SS DV+ WG K G N ++ N D P++
Sbjct: 231 IRIVSVSCGMRHSIALSSENDVYGWGCNK-FGQLSNLIDGNSLKSNNNNNNINDIADPMV 289
Query: 233 ISGNGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 289
+ P F++ + Q++CG HT+L+ + + S+G+ + G LG G ID P
Sbjct: 290 --QDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPC 347
Query: 290 IV 291
++
Sbjct: 348 VI 349
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 42/175 (24%)
Query: 59 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL-GLGDRES-------RLRPKI 110
+V V+CG H +AL S + Y WG N GQL L D S I
Sbjct: 233 IVSVSCGMRHSIALSSENDV--------YGWGCNKFGQLSNLIDGNSLKSNNNNNNINDI 284
Query: 111 IETFNQDSP--------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 162
+ QDSP + +++CG HT LL D+ +FG + GQLG+
Sbjct: 285 ADPMVQDSPKLINFKNEIKIIQISCGFQHTLLL-------DINFKNVLSFGQNKFGQLGN 337
Query: 163 GT-----------TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 206
G S ++P + + + + CG ++ ++++ ++ G
Sbjct: 338 GNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICG 392
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 101 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 160
+R++ PK+IE ++ + V+CG H+ L+ ND+ C FG N
Sbjct: 213 ERKNLNEPKLIEIL-FNNKIRIVSVSCGMRHSIALSSE---NDVYGWGCNKFGQLSNLID 268
Query: 161 GHGTTQSA-------LVPEQVKELPQYVY------LVSVDCGLFHTSVVS-SAGDVWSWG 206
G+ + + V++ P+ + ++ + CG HT ++ + +V S+G
Sbjct: 269 GNSLKSNNNNNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFG 328
Query: 207 MEKGLGLCPNASLT--RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 264
K G N + N IS ++ + ++ CG +++ L+T+
Sbjct: 329 QNK-FGQLGNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQD- 386
Query: 265 KLWSWGRGRSGVLGTGKTI 283
KL+ GRG G+LG + +
Sbjct: 387 KLYICGRGEYGILGDNRDL 405
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 121/308 (39%), Gaps = 74/308 (24%)
Query: 2 SQICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----------------------- 38
++I GGM +LA+D +W WG DS G
Sbjct: 65 TKIVDFAVGGMHTLALDGKNRIWSWGG---NDSEVLGRDTCQAKEVLKDIDGKNGNDDDD 121
Query: 39 ----GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN-- 92
G + TP+ V + +V++A AL+S G+ Y SWG
Sbjct: 122 DDEDGDLNEAESTPALVENLPEGEIVQLAATDNLSAALLSNGDVY--------SWGCFRC 173
Query: 93 NNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTF 152
N G LG E +L Q +P + E+ H ++ K L+S W
Sbjct: 174 NEGLLGFLRDEIKL---------QKTPLKIKELKK---HCPIMRSVKIILLALDSKEWMP 221
Query: 153 GL-GENGQLGHGTTQS----ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 207
G+ G+ QLG + +L P+Q L Y+ S D FH + + +V++WG+
Sbjct: 222 GVNGQQYQLGRRILERHRYRSLEPQQFG-LYNIKYIASGD---FHCFAIDHSHNVYAWGL 277
Query: 208 EKGLGLCP----NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 263
+ G C N L + + P LI G K ++A G HT+ +T+DG
Sbjct: 278 NQ-YGQCALTGDNGEL--EDGSVLMKPTLIPELSHKGIK-----EIAAGEHHTLALTEDG 329
Query: 264 YKLWSWGR 271
++++WGR
Sbjct: 330 -QVYAWGR 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,410,926
Number of Sequences: 539616
Number of extensions: 7625383
Number of successful extensions: 19897
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 18777
Number of HSP's gapped (non-prelim): 440
length of query: 434
length of database: 191,569,459
effective HSP length: 120
effective length of query: 314
effective length of database: 126,815,539
effective search space: 39820079246
effective search space used: 39820079246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)