Query 013929
Match_columns 433
No_of_seqs 380 out of 2998
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 19:44:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 3E-45 1E-49 347.8 34.3 281 113-431 20-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 5.9E-45 2E-49 344.6 34.3 280 116-432 14-299 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 6.4E-45 2.2E-49 345.0 32.1 276 117-431 11-293 (306)
4 2vpj_A Kelch-like protein 12; 100.0 5.4E-44 1.9E-48 337.8 34.0 279 116-432 13-300 (301)
5 4asc_A Kelch repeat and BTB do 100.0 2.7E-42 9.3E-47 328.4 29.2 265 141-432 13-297 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.9E-41 9.8E-46 321.8 26.9 274 117-432 15-307 (318)
7 2uvk_A YJHT; unknown function, 100.0 9.3E-40 3.2E-44 316.3 28.5 269 115-421 17-353 (357)
8 1zgk_A Kelch-like ECH-associat 100.0 1.8E-38 6.1E-43 301.1 25.5 237 170-432 18-262 (308)
9 4asc_A Kelch repeat and BTB do 100.0 3E-38 1E-42 300.5 25.8 245 114-391 42-306 (315)
10 2xn4_A Kelch-like protein 2; s 100.0 1.6E-37 5.5E-42 293.6 28.3 237 115-385 59-302 (302)
11 3ii7_A Kelch-like protein 7; p 100.0 1.1E-37 3.8E-42 295.3 26.9 228 176-432 11-247 (306)
12 2woz_A Kelch repeat and BTB do 100.0 9.6E-38 3.3E-42 297.4 25.2 248 114-390 53-315 (318)
13 2uvk_A YJHT; unknown function, 100.0 1.4E-37 4.7E-42 301.1 26.7 252 155-432 2-316 (357)
14 2vpj_A Kelch-like protein 12; 100.0 5.8E-37 2E-41 289.5 27.1 234 174-432 12-253 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 1.9E-33 6.4E-38 294.2 25.2 246 116-393 396-676 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 3.9E-33 1.3E-37 291.8 21.9 246 152-431 378-663 (695)
17 1k3i_A Galactose oxidase precu 100.0 4E-33 1.4E-37 291.0 16.2 285 117-431 197-518 (656)
18 1k3i_A Galactose oxidase precu 100.0 1.7E-30 6E-35 271.1 16.3 263 142-431 167-464 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1E-07 3.5E-12 93.7 25.9 274 77-408 15-348 (445)
20 1p22_A F-BOX/WD-repeat protein 98.9 1.5E-07 5.2E-12 92.4 20.3 273 78-406 8-363 (435)
21 3v7d_B Cell division control p 98.8 9.5E-07 3.2E-11 87.1 24.7 41 77-117 11-51 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.6 2.6E-08 8.8E-13 66.9 3.3 45 78-122 6-50 (53)
23 3dsm_A Uncharacterized protein 98.4 0.00015 5E-09 68.2 25.5 210 140-390 16-244 (328)
24 3mbr_X Glutamine cyclotransfer 98.3 4.4E-05 1.5E-09 68.1 18.8 188 170-390 24-223 (243)
25 3nol_A Glutamine cyclotransfer 98.1 0.00014 4.7E-09 65.5 16.8 187 171-390 47-244 (262)
26 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0037 1.3E-07 59.4 28.3 234 134-416 56-304 (376)
27 2e31_A FBS1, F-box only protei 98.1 9E-07 3.1E-11 81.1 1.9 47 77-123 47-94 (297)
28 3dsm_A Uncharacterized protein 98.1 0.0027 9.2E-08 59.4 26.0 167 192-390 16-190 (328)
29 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0029 9.9E-08 60.2 25.7 204 133-389 145-366 (376)
30 3nok_A Glutaminyl cyclase; bet 98.0 0.00019 6.4E-09 64.7 15.2 184 171-390 59-254 (268)
31 2iwa_A Glutamine cyclotransfer 97.8 0.00099 3.4E-08 60.4 16.4 188 172-392 26-227 (266)
32 3mbr_X Glutamine cyclotransfer 97.7 0.0011 3.8E-08 59.0 15.6 140 218-389 24-166 (243)
33 3vgz_A Uncharacterized protein 97.7 0.034 1.2E-06 51.6 26.5 217 140-406 68-301 (353)
34 1ri6_A Putative isomerase YBHE 97.5 0.0048 1.6E-07 57.1 18.2 248 141-430 60-330 (343)
35 3jrp_A Fusion protein of prote 97.5 0.0027 9.4E-08 59.6 15.7 240 134-420 26-298 (379)
36 3nol_A Glutamine cyclotransfer 97.4 0.0016 5.3E-08 58.6 12.5 113 218-358 46-158 (262)
37 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.035 1.2E-06 53.8 22.8 194 175-408 247-442 (445)
38 1q7f_A NHL, brain tumor CG1071 97.4 0.073 2.5E-06 47.9 26.0 222 140-407 50-279 (286)
39 1l0q_A Surface layer protein; 97.4 0.0032 1.1E-07 59.8 14.9 177 140-361 11-195 (391)
40 1npe_A Nidogen, entactin; glyc 97.3 0.095 3.3E-06 46.9 24.5 173 176-390 47-226 (267)
41 1gxr_A ESG1, transducin-like e 97.2 0.0065 2.2E-07 56.0 14.9 185 176-410 108-298 (337)
42 1l0q_A Surface layer protein; 97.2 0.0035 1.2E-07 59.6 13.1 178 178-407 3-188 (391)
43 3v7d_B Cell division control p 97.2 0.079 2.7E-06 51.4 23.2 184 176-406 279-463 (464)
44 4ery_A WD repeat-containing pr 97.2 0.092 3.1E-06 47.9 22.0 186 176-408 76-268 (312)
45 3vgz_A Uncharacterized protein 97.2 0.04 1.4E-06 51.1 19.7 195 133-364 102-312 (353)
46 3bws_A Protein LP49; two-domai 97.2 0.016 5.6E-07 55.7 17.5 216 142-407 102-333 (433)
47 1rwi_B Serine/threonine-protei 97.1 0.04 1.4E-06 49.0 18.8 214 140-407 45-263 (270)
48 3jrp_A Fusion protein of prote 97.1 0.013 4.6E-07 54.8 16.2 181 194-410 34-242 (379)
49 1gxr_A ESG1, transducin-like e 97.1 0.022 7.7E-07 52.2 17.3 210 133-391 111-326 (337)
50 1k8k_C P40, ARP2/3 complex 41 97.1 0.027 9.1E-07 52.7 17.7 237 134-419 23-285 (372)
51 3nok_A Glutaminyl cyclase; bet 97.1 0.0092 3.1E-07 53.6 13.3 136 218-388 58-196 (268)
52 4g56_B MGC81050 protein; prote 97.0 0.019 6.6E-07 54.1 16.0 186 176-409 150-344 (357)
53 1p22_A F-BOX/WD-repeat protein 97.0 0.022 7.4E-07 55.2 16.2 186 173-408 139-325 (435)
54 2z2n_A Virginiamycin B lyase; 96.9 0.15 5E-06 45.8 20.9 202 141-390 78-284 (299)
55 2z2n_A Virginiamycin B lyase; 96.9 0.15 5.2E-06 45.7 20.8 202 140-389 35-242 (299)
56 2iwa_A Glutamine cyclotransfer 96.9 0.032 1.1E-06 50.4 15.6 140 218-389 24-168 (266)
57 3bg1_A Protein SEC13 homolog; 96.9 0.034 1.2E-06 51.3 16.4 201 177-424 71-308 (316)
58 4gqb_B Methylosome protein 50; 96.9 0.029 9.8E-07 52.8 15.7 184 176-408 138-331 (344)
59 2p4o_A Hypothetical protein; p 96.9 0.16 5.6E-06 46.4 20.7 206 139-390 51-277 (306)
60 3scy_A Hypothetical bacterial 96.9 0.062 2.1E-06 50.3 18.0 79 335-419 221-302 (361)
61 4aez_A CDC20, WD repeat-contai 96.9 0.052 1.8E-06 51.8 17.8 230 133-414 148-386 (401)
62 3g4e_A Regucalcin; six bladed 96.8 0.015 5.1E-07 53.3 13.2 212 136-392 30-263 (297)
63 2qc5_A Streptogramin B lactona 96.8 0.18 6.2E-06 45.2 20.1 202 140-389 40-247 (300)
64 3bws_A Protein LP49; two-domai 96.8 0.036 1.2E-06 53.2 16.0 186 141-359 144-338 (433)
65 1rwi_B Serine/threonine-protei 96.8 0.16 5.5E-06 45.0 19.4 172 176-390 34-210 (270)
66 1ri6_A Putative isomerase YBHE 96.7 0.086 2.9E-06 48.4 17.9 205 177-420 50-274 (343)
67 3hfq_A Uncharacterized protein 96.7 0.023 7.8E-07 53.0 13.9 189 142-362 19-227 (347)
68 2qc5_A Streptogramin B lactona 96.7 0.2 6.7E-06 45.0 20.0 201 140-389 82-289 (300)
69 2hqs_A Protein TOLB; TOLB, PAL 96.7 0.056 1.9E-06 52.1 17.0 228 141-416 159-393 (415)
70 3v9f_A Two-component system se 96.7 0.089 3.1E-06 55.2 19.9 181 138-362 424-618 (781)
71 3v65_B Low-density lipoprotein 96.7 0.31 1.1E-05 46.4 21.6 206 131-389 87-305 (386)
72 2pm7_B Protein transport prote 96.6 0.15 5.3E-06 46.2 18.6 200 177-419 67-295 (297)
73 3ow8_A WD repeat-containing pr 96.6 0.17 5.8E-06 46.7 19.0 216 137-406 98-319 (321)
74 3jro_A Fusion protein of prote 96.6 0.041 1.4E-06 57.7 16.2 241 133-420 23-296 (753)
75 2ojh_A Uncharacterized protein 96.6 0.14 4.6E-06 45.6 17.4 185 141-363 22-214 (297)
76 4aez_A CDC20, WD repeat-contai 96.6 0.16 5.4E-06 48.4 18.8 183 135-360 107-298 (401)
77 1k8k_C P40, ARP2/3 complex 41 96.5 0.2 6.7E-06 46.6 19.0 70 272-364 213-285 (372)
78 4ery_A WD repeat-containing pr 96.5 0.29 1E-05 44.4 19.8 148 176-357 118-270 (312)
79 3v64_C Agrin; beta propeller, 96.5 0.55 1.9E-05 44.0 24.0 206 131-390 44-263 (349)
80 4a2l_A BT_4663, two-component 96.5 0.12 4.2E-06 54.3 19.1 184 134-362 420-621 (795)
81 3jro_A Fusion protein of prote 96.5 0.035 1.2E-06 58.2 14.5 191 177-409 21-239 (753)
82 1r5m_A SIR4-interacting protei 96.5 0.1 3.5E-06 49.4 16.7 133 193-357 227-363 (425)
83 1ijq_A LDL receptor, low-densi 96.4 0.55 1.9E-05 43.2 24.3 209 132-389 2-225 (316)
84 3mkq_A Coatomer beta'-subunit; 96.4 0.14 4.8E-06 53.6 18.9 225 132-408 26-259 (814)
85 1kb0_A Quinohemoprotein alcoho 96.4 1.1 3.6E-05 46.2 25.0 208 133-357 79-348 (677)
86 1kv9_A Type II quinohemoprotei 96.4 0.6 2.1E-05 48.0 23.0 207 133-357 68-335 (668)
87 2ynn_A Coatomer subunit beta'; 96.4 0.51 1.7E-05 42.9 20.3 220 132-407 26-258 (304)
88 3ow8_A WD repeat-containing pr 96.3 0.22 7.4E-06 46.0 17.8 182 177-407 92-278 (321)
89 2pm7_B Protein transport prote 96.3 0.28 9.7E-06 44.4 18.2 203 176-414 20-244 (297)
90 2vdu_B TRNA (guanine-N(7)-)-me 96.3 0.33 1.1E-05 47.0 19.6 211 176-414 160-397 (450)
91 3no2_A Uncharacterized protein 96.3 0.52 1.8E-05 42.5 19.7 203 139-389 13-230 (276)
92 1pjx_A Dfpase, DIISOPROPYLFLUO 96.3 0.087 3E-06 48.0 14.6 187 140-357 45-258 (314)
93 3hfq_A Uncharacterized protein 96.3 0.033 1.1E-06 51.9 11.8 192 194-415 19-225 (347)
94 2ast_B S-phase kinase-associat 96.3 0.0014 4.9E-08 61.4 2.2 45 77-121 5-49 (336)
95 1q7f_A NHL, brain tumor CG1071 96.2 0.44 1.5E-05 42.6 18.9 178 176-391 40-226 (286)
96 3vl1_A 26S proteasome regulato 96.2 0.39 1.3E-05 45.5 19.4 201 176-409 108-323 (420)
97 1got_B GT-beta; complex (GTP-b 96.2 0.45 1.5E-05 44.0 19.2 164 194-392 165-333 (340)
98 2ad6_A Methanol dehydrogenase 96.2 1.3 4.4E-05 44.6 23.8 208 133-360 64-342 (571)
99 2aq5_A Coronin-1A; WD40 repeat 96.1 0.93 3.2E-05 42.8 22.5 149 176-357 93-256 (402)
100 3l2o_B F-box only protein 4; s 96.1 0.0013 4.4E-08 59.7 0.9 43 81-123 5-47 (312)
101 1yiq_A Quinohemoprotein alcoho 96.1 1.6 5.3E-05 45.1 25.5 116 133-256 72-200 (689)
102 3p5b_L Low density lipoprotein 96.1 1 3.5E-05 43.0 21.7 210 131-389 83-307 (400)
103 1r5m_A SIR4-interacting protei 96.1 0.38 1.3E-05 45.4 18.5 181 133-359 122-323 (425)
104 3f3f_A Nucleoporin SEH1; struc 96.0 0.41 1.4E-05 43.5 17.9 20 337-356 231-250 (351)
105 3dwl_C Actin-related protein 2 96.0 0.11 3.6E-06 48.8 13.9 215 141-391 33-271 (377)
106 3fm0_A Protein CIAO1; WDR39,SG 96.0 0.055 1.9E-06 50.5 11.8 181 176-392 27-215 (345)
107 3k26_A Polycomb protein EED; W 96.0 0.82 2.8E-05 42.0 20.0 104 177-301 85-194 (366)
108 1got_B GT-beta; complex (GTP-b 96.0 0.57 2E-05 43.3 18.7 185 176-407 108-300 (340)
109 2ojh_A Uncharacterized protein 95.9 0.16 5.4E-06 45.2 14.3 190 140-364 61-267 (297)
110 1nir_A Nitrite reductase; hemo 95.9 0.25 8.7E-06 49.5 17.0 237 133-420 150-417 (543)
111 1npe_A Nidogen, entactin; glyc 95.9 0.85 2.9E-05 40.5 20.1 186 133-359 49-242 (267)
112 3ei3_B DNA damage-binding prot 95.9 0.21 7E-06 47.0 15.4 173 194-408 97-282 (383)
113 3dwl_C Actin-related protein 2 95.9 0.035 1.2E-06 52.2 9.9 150 176-356 22-178 (377)
114 2ghs_A AGR_C_1268P; regucalcin 95.9 0.49 1.7E-05 43.7 17.7 206 138-391 68-292 (326)
115 3v9f_A Two-component system se 95.8 0.6 2E-05 48.9 20.2 208 136-389 378-600 (781)
116 3m0c_C LDL receptor, low-densi 95.8 1.2 4.1E-05 46.7 22.1 209 132-390 396-620 (791)
117 1w6s_A Methanol dehydrogenase 95.8 1.6 5.4E-05 44.2 22.4 118 173-305 59-199 (599)
118 3azo_A Aminopeptidase; POP fam 95.8 0.61 2.1E-05 47.5 19.8 157 192-362 160-332 (662)
119 1sq9_A Antiviral protein SKI8; 95.8 0.34 1.2E-05 45.5 16.7 111 224-358 197-325 (397)
120 2vdu_B TRNA (guanine-N(7)-)-me 95.8 0.75 2.6E-05 44.3 19.5 150 178-360 116-276 (450)
121 2fp8_A Strictosidine synthase; 95.8 0.29 9.9E-06 45.0 15.8 221 133-390 32-301 (322)
122 2fp8_A Strictosidine synthase; 95.8 0.11 3.7E-06 48.0 12.9 198 133-356 93-314 (322)
123 3u4y_A Uncharacterized protein 95.8 0.2 7E-06 45.8 14.7 230 133-407 53-303 (331)
124 1vyh_C Platelet-activating fac 95.8 0.35 1.2E-05 46.2 16.8 146 176-359 119-269 (410)
125 2pm9_A Protein WEB1, protein t 95.8 0.3 1E-05 46.2 16.2 148 177-357 178-339 (416)
126 3fvz_A Peptidyl-glycine alpha- 95.8 1.2 4E-05 41.0 22.0 156 176-355 154-322 (329)
127 3no2_A Uncharacterized protein 95.7 0.37 1.3E-05 43.5 15.7 191 176-416 4-203 (276)
128 1vyh_C Platelet-activating fac 95.7 0.39 1.3E-05 45.9 16.8 232 133-408 122-369 (410)
129 4aow_A Guanine nucleotide-bind 95.7 0.38 1.3E-05 43.9 16.2 146 226-408 186-337 (340)
130 3i2n_A WD repeat-containing pr 95.7 0.38 1.3E-05 44.2 16.2 153 178-361 32-205 (357)
131 1yiq_A Quinohemoprotein alcoho 95.7 2.3 7.9E-05 43.8 25.3 117 173-305 67-200 (689)
132 4a2l_A BT_4663, two-component 95.7 1.5 5E-05 46.0 22.4 185 141-363 107-299 (795)
133 3fvz_A Peptidyl-glycine alpha- 95.7 1.3 4.4E-05 40.7 22.3 190 193-407 69-276 (329)
134 2hes_X YDR267CP; beta-propelle 95.7 0.51 1.7E-05 43.5 17.0 156 224-416 118-286 (330)
135 3vl1_A 26S proteasome regulato 95.6 1.5 5.2E-05 41.3 24.3 221 134-408 112-365 (420)
136 4a11_B DNA excision repair pro 95.6 1.1 3.8E-05 41.8 19.6 224 134-408 115-365 (408)
137 3zwl_B Eukaryotic translation 95.6 0.38 1.3E-05 44.3 15.8 64 224-303 186-253 (369)
138 3lrv_A PRE-mRNA-splicing facto 95.6 1.4 4.9E-05 40.5 20.7 156 224-415 138-299 (343)
139 3u4y_A Uncharacterized protein 95.6 0.36 1.2E-05 44.0 15.5 179 139-358 18-210 (331)
140 3odt_A Protein DOA1; ubiquitin 95.5 0.71 2.4E-05 41.4 17.2 24 333-357 193-216 (313)
141 1sq9_A Antiviral protein SKI8; 95.5 0.48 1.6E-05 44.4 16.5 146 178-357 82-269 (397)
142 2hqs_A Protein TOLB; TOLB, PAL 95.5 0.44 1.5E-05 45.7 16.3 184 141-363 203-395 (415)
143 1pjx_A Dfpase, DIISOPROPYLFLUO 95.4 0.19 6.5E-06 45.6 12.9 189 134-356 85-300 (314)
144 2pm9_A Protein WEB1, protein t 95.4 1.3 4.4E-05 41.7 19.0 192 177-409 126-338 (416)
145 1w6s_A Methanol dehydrogenase 95.4 2.2 7.7E-05 43.1 21.5 211 133-360 64-349 (599)
146 3v65_B Low-density lipoprotein 95.3 2 6.7E-05 40.8 20.5 181 133-357 129-320 (386)
147 3ott_A Two-component system se 95.3 2 6.7E-05 44.7 21.6 181 141-361 392-592 (758)
148 1qks_A Cytochrome CD1 nitrite 95.3 0.78 2.7E-05 46.1 17.7 240 132-420 167-436 (567)
149 2hes_X YDR267CP; beta-propelle 95.3 0.12 4.2E-06 47.8 11.1 192 176-407 118-327 (330)
150 3zwl_B Eukaryotic translation 95.3 0.77 2.6E-05 42.2 16.7 154 176-361 85-255 (369)
151 2z3z_A Dipeptidyl aminopeptida 95.2 1.9 6.5E-05 44.1 20.9 149 192-362 234-398 (706)
152 3e5z_A Putative gluconolactona 95.1 1.7 5.7E-05 39.0 18.3 190 135-362 44-253 (296)
153 2dg1_A DRP35, lactonase; beta 95.1 0.31 1.1E-05 44.7 13.5 193 139-361 64-269 (333)
154 2pbi_B Guanine nucleotide-bind 95.1 1.9 6.4E-05 40.1 18.8 163 193-392 176-347 (354)
155 2pbi_B Guanine nucleotide-bind 95.0 0.97 3.3E-05 42.1 16.8 143 224-407 165-314 (354)
156 4g56_B MGC81050 protein; prote 94.9 0.44 1.5E-05 44.6 14.0 135 194-357 116-260 (357)
157 2ad6_A Methanol dehydrogenase 94.9 1.6 5.5E-05 43.9 18.9 117 219-361 57-193 (571)
158 3ei3_B DNA damage-binding prot 94.9 1.2 4E-05 41.6 17.1 144 226-408 87-236 (383)
159 1kb0_A Quinohemoprotein alcoho 94.9 1.1 3.8E-05 46.1 18.0 116 219-361 72-207 (677)
160 1kv9_A Type II quinohemoprotei 94.9 4 0.00014 41.8 24.4 117 173-305 63-195 (668)
161 1erj_A Transcriptional repress 94.9 1.1 3.7E-05 42.4 16.8 227 133-407 137-388 (393)
162 1jmx_B Amine dehydrogenase; ox 94.8 1.4 4.7E-05 40.2 17.0 146 138-303 18-179 (349)
163 3odt_A Protein DOA1; ubiquitin 94.8 2.1 7.2E-05 38.1 20.6 141 224-408 154-296 (313)
164 1yfq_A Cell cycle arrest prote 94.7 2.4 8.1E-05 38.5 20.8 146 176-356 67-226 (342)
165 3bg1_A Protein SEC13 homolog; 94.7 0.24 8.2E-06 45.4 11.4 202 176-408 24-247 (316)
166 3azo_A Aminopeptidase; POP fam 94.6 1.4 4.6E-05 44.9 17.9 190 141-362 161-376 (662)
167 1ijq_A LDL receptor, low-densi 94.6 2.7 9.3E-05 38.4 20.4 148 175-357 87-240 (316)
168 3i2n_A WD repeat-containing pr 94.5 1.3 4.6E-05 40.4 16.3 143 177-356 80-244 (357)
169 3scy_A Hypothetical bacterial 94.5 0.47 1.6E-05 44.1 13.2 113 179-300 15-130 (361)
170 3pe7_A Oligogalacturonate lyas 94.5 1.1 3.8E-05 41.8 15.9 153 192-363 167-337 (388)
171 2dg1_A DRP35, lactonase; beta 94.5 0.19 6.4E-06 46.3 10.1 154 176-355 55-213 (333)
172 2aq5_A Coronin-1A; WD40 repeat 94.5 1.7 5.8E-05 40.9 17.2 157 178-364 145-310 (402)
173 1yfq_A Cell cycle arrest prote 94.5 1.7 5.8E-05 39.5 16.8 52 335-393 262-314 (342)
174 3c5m_A Oligogalacturonate lyas 94.4 0.39 1.3E-05 45.0 12.4 149 192-362 167-336 (396)
175 1pgu_A Actin interacting prote 94.4 3.4 0.00012 41.0 20.1 143 225-407 456-613 (615)
176 2p1m_B Transport inhibitor res 94.4 0.012 4E-07 59.7 1.6 37 78-114 3-40 (594)
177 4gqb_B Methylosome protein 50; 94.4 1.2 4.2E-05 41.4 15.6 137 193-357 103-248 (344)
178 3g4e_A Regucalcin; six bladed 94.4 0.52 1.8E-05 42.7 12.7 148 176-358 24-185 (297)
179 1pex_A Collagenase-3, MMP-13; 94.3 2.2 7.6E-05 36.6 17.6 153 171-360 28-197 (207)
180 4gga_A P55CDC, cell division c 94.3 0.52 1.8E-05 45.0 13.2 137 193-357 125-263 (420)
181 3v64_C Agrin; beta propeller, 94.3 3.4 0.00012 38.4 22.6 181 133-357 86-277 (349)
182 2bkl_A Prolyl endopeptidase; m 94.2 5.6 0.00019 40.7 22.8 174 193-391 147-338 (695)
183 3hxj_A Pyrrolo-quinoline quino 94.2 2.1 7.2E-05 38.8 16.7 193 133-389 109-312 (330)
184 1n7d_A LDL receptor, low-densi 94.0 0.61 2.1E-05 48.3 13.7 202 140-390 385-602 (699)
185 1jmx_B Amine dehydrogenase; ox 94.0 1.2 4E-05 40.7 14.6 158 175-360 9-180 (349)
186 3k26_A Polycomb protein EED; W 94.0 3.5 0.00012 37.5 18.9 63 336-406 299-364 (366)
187 3hrp_A Uncharacterized protein 94.0 4.5 0.00015 38.6 22.4 195 141-362 152-361 (409)
188 1erj_A Transcriptional repress 94.0 1.2 4.1E-05 42.1 14.8 147 224-407 134-286 (393)
189 2ynn_A Coatomer subunit beta'; 94.0 0.68 2.3E-05 42.0 12.6 146 176-359 108-263 (304)
190 3mkq_A Coatomer beta'-subunit; 93.9 0.49 1.7E-05 49.3 13.1 182 134-359 70-263 (814)
191 3e5z_A Putative gluconolactona 93.9 1 3.6E-05 40.4 13.7 150 177-358 40-206 (296)
192 1nir_A Nitrite reductase; hemo 93.8 1.6 5.4E-05 43.6 15.9 195 132-367 191-419 (543)
193 4e54_B DNA damage-binding prot 93.6 0.32 1.1E-05 46.9 10.1 144 178-357 133-284 (435)
194 4aow_A Guanine nucleotide-bind 93.5 1.6 5.4E-05 39.6 14.4 148 176-358 97-249 (340)
195 3iz6_a 40S ribosomal protein R 93.5 4.9 0.00017 37.5 20.6 229 133-407 80-328 (380)
196 4a11_B DNA excision repair pro 93.2 1.3 4.5E-05 41.3 13.7 149 176-357 111-278 (408)
197 4e54_B DNA damage-binding prot 93.2 0.63 2.1E-05 44.7 11.5 107 225-357 132-242 (435)
198 3lrv_A PRE-mRNA-splicing facto 93.2 2.8 9.7E-05 38.4 15.7 188 176-409 47-245 (343)
199 3mmy_A MRNA export factor; mRN 93.2 3.3 0.00011 37.7 16.2 224 133-392 100-336 (368)
200 3mmy_A MRNA export factor; mRN 93.1 1.8 6.1E-05 39.6 14.3 149 225-416 54-207 (368)
201 1pby_B Quinohemoprotein amine 93.0 2.2 7.4E-05 38.5 14.5 150 133-303 3-167 (337)
202 2ymu_A WD-40 repeat protein; u 93.0 1.3 4.3E-05 44.0 13.8 131 224-392 437-570 (577)
203 2hz6_A Endoplasmic reticulum t 93.0 0.086 2.9E-06 50.0 4.8 142 173-360 6-156 (369)
204 3hrp_A Uncharacterized protein 93.0 5 0.00017 38.2 17.5 148 176-356 141-299 (409)
205 1flg_A Protein (quinoprotein e 92.9 7.6 0.00026 39.0 19.4 115 219-360 63-200 (582)
206 2ymu_A WD-40 repeat protein; u 92.9 3.5 0.00012 40.8 16.9 179 176-407 355-538 (577)
207 3fm0_A Protein CIAO1; WDR39,SG 92.9 3.7 0.00013 37.8 16.0 179 140-353 37-223 (345)
208 1qhu_A Protein (hemopexin); be 92.8 3.4 0.00012 40.2 15.8 57 176-251 158-216 (460)
209 2ghs_A AGR_C_1268P; regucalcin 92.8 1.5 5.2E-05 40.2 13.1 143 176-354 60-209 (326)
210 2p4o_A Hypothetical protein; p 92.7 5.4 0.00019 36.0 19.4 150 176-355 42-198 (306)
211 1flg_A Protein (quinoprotein e 92.7 9.2 0.00031 38.4 23.2 115 133-255 70-200 (582)
212 3iz6_a 40S ribosomal protein R 92.6 5.9 0.0002 36.9 17.3 189 134-356 173-376 (380)
213 2z3z_A Dipeptidyl aminopeptida 92.6 9.9 0.00034 38.7 21.7 111 240-362 234-351 (706)
214 1qhu_A Protein (hemopexin); be 92.5 8.2 0.00028 37.4 18.5 196 140-391 166-429 (460)
215 3m0c_C LDL receptor, low-densi 92.5 11 0.00036 39.5 20.2 146 176-356 482-633 (791)
216 2ecf_A Dipeptidyl peptidase IV 92.3 6.2 0.00021 40.5 18.4 103 242-362 264-375 (741)
217 3sfz_A APAF-1, apoptotic pepti 91.9 0.6 2E-05 51.5 10.6 185 135-358 1019-1210(1249)
218 3sfz_A APAF-1, apoptotic pepti 91.7 1.8 6.2E-05 47.6 14.1 186 176-408 972-1158(1249)
219 3sov_A LRP-6, low-density lipo 91.7 7.8 0.00027 35.5 18.7 167 176-389 46-225 (318)
220 3tc9_A Hypothetical hydrolase; 91.4 4.6 0.00016 38.9 15.1 204 132-362 150-377 (430)
221 3hxj_A Pyrrolo-quinoline quino 91.4 2.8 9.4E-05 37.9 13.0 139 173-360 104-250 (330)
222 3c5m_A Oligogalacturonate lyas 91.2 2.9 9.9E-05 38.8 13.2 196 141-361 168-390 (396)
223 3c7x_A Matrix metalloproteinas 91.1 4.6 0.00016 34.2 13.1 148 172-357 11-177 (196)
224 1n7d_A LDL receptor, low-densi 91.1 2.7 9.2E-05 43.4 13.8 152 175-361 463-620 (699)
225 1pgu_A Actin interacting prote 91.0 4.7 0.00016 39.9 15.4 131 193-355 467-614 (615)
226 4a0p_A LRP6, LRP-6, low-densit 90.5 16 0.00055 37.0 26.0 207 131-389 6-224 (628)
227 3ogk_B Coronatine-insensitive 90.5 0.087 3E-06 53.2 1.9 34 82-115 14-48 (592)
228 3ott_A Two-component system se 90.4 17 0.00059 37.5 19.4 150 176-365 73-230 (758)
229 3oyo_A Hemopexin fold protein 90.3 8.1 0.00028 33.5 14.2 140 175-355 12-198 (225)
230 2xyi_A Probable histone-bindin 90.3 1.3 4.4E-05 42.4 10.0 19 337-355 291-309 (430)
231 2qe8_A Uncharacterized protein 90.3 11 0.00037 34.6 17.9 53 334-391 257-310 (343)
232 3ba0_A Macrophage metalloelast 90.0 12 0.00043 34.9 17.3 148 171-360 185-355 (365)
233 4hw6_A Hypothetical protein, I 90.0 8.6 0.00029 36.9 15.6 203 133-362 154-380 (433)
234 3frx_A Guanine nucleotide-bind 90.0 5.4 0.00019 36.1 13.6 144 176-357 76-229 (319)
235 3dr2_A Exported gluconolactona 89.9 4.4 0.00015 36.5 12.9 192 135-362 61-274 (305)
236 1su3_A Interstitial collagenas 89.8 6.8 0.00023 37.9 14.5 143 171-361 267-438 (450)
237 3dm0_A Maltose-binding peripla 89.7 6.5 0.00022 40.2 15.3 146 176-357 441-594 (694)
238 3sov_A LRP-6, low-density lipo 89.6 12 0.00041 34.2 20.0 145 176-357 90-240 (318)
239 3dr2_A Exported gluconolactona 89.2 3.1 0.00011 37.5 11.3 157 134-305 99-273 (305)
240 2xzm_R RACK1; ribosome, transl 89.2 13 0.00044 33.9 17.5 62 224-300 87-150 (343)
241 4ggc_A P55CDC, cell division c 89.1 2.2 7.6E-05 38.1 10.1 137 193-357 45-183 (318)
242 2xzm_R RACK1; ribosome, transl 88.9 13 0.00046 33.7 15.6 21 335-355 224-244 (343)
243 4a0p_A LRP6, LRP-6, low-densit 88.8 22 0.00075 36.0 18.7 160 194-390 16-185 (628)
244 1itv_A MMP9; adaptive molecula 88.7 10 0.00034 32.0 15.7 142 171-357 11-176 (195)
245 1qks_A Cytochrome CD1 nitrite 88.3 10 0.00035 37.9 15.2 197 131-366 208-437 (567)
246 3p5b_L Low density lipoprotein 88.2 18 0.0006 34.2 20.1 169 194-407 93-276 (400)
247 3gre_A Serine/threonine-protei 88.0 9.6 0.00033 35.9 14.4 154 176-357 181-361 (437)
248 4gga_A P55CDC, cell division c 88.0 9.2 0.00032 36.1 14.2 94 241-357 125-220 (420)
249 3c75_H MADH, methylamine dehyd 88.0 13 0.00043 35.7 15.0 100 141-253 99-212 (426)
250 3f3f_A Nucleoporin SEH1; struc 87.9 14 0.00048 32.8 14.9 31 335-365 317-348 (351)
251 2ece_A 462AA long hypothetical 87.9 8.9 0.00031 37.1 13.6 163 176-362 95-296 (462)
252 2xdw_A Prolyl endopeptidase; a 87.8 16 0.00055 37.3 16.8 145 192-362 258-423 (710)
253 1pby_B Quinohemoprotein amine 87.6 7.4 0.00025 34.8 12.8 100 241-361 11-130 (337)
254 1nr0_A Actin interacting prote 87.6 15 0.00052 36.8 16.2 174 194-407 171-354 (611)
255 1yr2_A Prolyl oligopeptidase; 87.3 29 0.00098 35.7 20.0 172 193-391 189-382 (741)
256 3dm0_A Maltose-binding peripla 87.0 20 0.0007 36.4 17.0 144 224-407 441-591 (694)
257 2hz6_A Endoplasmic reticulum t 86.9 0.27 9.2E-06 46.5 2.4 144 221-415 6-156 (369)
258 4h5i_A Guanine nucleotide-exch 86.6 20 0.00067 33.1 18.0 180 192-407 156-342 (365)
259 2oiz_A Aromatic amine dehydrog 86.5 20 0.00069 33.1 18.6 80 335-430 265-355 (361)
260 2ecf_A Dipeptidyl peptidase IV 86.4 7.7 0.00026 39.7 13.5 57 241-307 129-189 (741)
261 3b7f_A Glycosyl hydrolase, BNR 86.3 22 0.00074 33.3 21.6 219 134-389 25-297 (394)
262 3gre_A Serine/threonine-protei 86.1 22 0.00076 33.3 16.5 105 224-358 181-295 (437)
263 3ju4_A Endo-N-acetylneuraminid 85.7 24 0.00083 33.3 14.9 177 203-393 270-483 (670)
264 3pe7_A Oligogalacturonate lyas 85.0 23 0.00079 32.5 17.6 199 142-366 61-284 (388)
265 2gop_A Trilobed protease; beta 84.9 22 0.00074 32.1 14.6 103 192-306 151-258 (347)
266 2xdw_A Prolyl endopeptidase; a 84.9 36 0.0012 34.6 21.5 186 193-406 151-366 (710)
267 3o4h_A Acylamino-acid-releasin 84.0 15 0.0005 36.4 13.9 96 241-363 90-192 (582)
268 4ggc_A P55CDC, cell division c 83.9 21 0.00073 31.4 13.8 95 241-358 45-141 (318)
269 2xyi_A Probable histone-bindin 83.8 14 0.00047 35.0 13.1 22 335-356 243-264 (430)
270 3iuj_A Prolyl endopeptidase; h 83.7 12 0.00042 38.2 13.4 143 193-364 259-414 (693)
271 3kya_A Putative phosphatase; s 83.7 34 0.0012 33.4 16.7 214 132-362 152-416 (496)
272 2xbg_A YCF48-like protein; pho 83.3 27 0.00091 31.8 19.6 150 176-363 46-201 (327)
273 3o4h_A Acylamino-acid-releasin 83.0 38 0.0013 33.3 17.8 138 193-360 90-232 (582)
274 2mad_H Methylamine dehydrogena 82.4 32 0.0011 32.1 26.7 79 335-429 278-368 (373)
275 3c75_H MADH, methylamine dehyd 82.3 22 0.00074 34.1 13.5 72 272-359 330-406 (426)
276 3b7f_A Glycosyl hydrolase, BNR 82.2 32 0.0011 32.0 23.4 236 142-421 82-384 (394)
277 3frx_A Guanine nucleotide-bind 82.0 23 0.0008 31.7 13.4 149 224-408 76-227 (319)
278 2bkl_A Prolyl endopeptidase; m 82.0 9.9 0.00034 38.9 11.9 147 192-362 251-404 (695)
279 3tc9_A Hypothetical hydrolase; 81.3 5.2 0.00018 38.4 8.9 111 224-364 149-266 (430)
280 1hxn_A Hemopexin, HPX; heme, b 81.1 20 0.00067 30.9 11.6 135 175-355 27-197 (219)
281 2p9w_A MAL S 1 allergenic prot 81.1 34 0.0012 31.5 19.1 233 133-392 26-305 (334)
282 3vu4_A KMHSV2; beta-propeller 81.1 33 0.0011 31.3 18.0 64 335-408 206-271 (355)
283 3oyo_A Hemopexin fold protein 81.1 21 0.00073 30.8 11.9 55 335-391 127-189 (225)
284 3lp9_A LS-24; SEED albumin, pl 81.0 11 0.00037 32.7 10.0 20 335-356 183-202 (227)
285 1k32_A Tricorn protease; prote 80.7 17 0.00058 39.2 13.6 139 194-362 318-468 (1045)
286 2gop_A Trilobed protease; beta 80.6 8.3 0.00028 35.0 9.8 142 192-363 42-215 (347)
287 3s94_A LRP-6, low-density lipo 78.8 58 0.002 32.8 22.2 170 176-390 360-539 (619)
288 2oiz_A Aromatic amine dehydrog 78.7 41 0.0014 31.0 17.1 73 272-363 265-342 (361)
289 1yr2_A Prolyl oligopeptidase; 77.4 27 0.00092 35.9 13.5 146 192-363 293-449 (741)
290 4h5i_A Guanine nucleotide-exch 77.2 45 0.0015 30.6 14.4 180 141-356 157-344 (365)
291 4hw6_A Hypothetical protein, I 76.2 22 0.00074 34.1 11.5 104 225-358 153-262 (433)
292 3sjl_D Methylamine dehydrogena 75.4 55 0.0019 30.8 20.7 101 141-253 59-172 (386)
293 2xbg_A YCF48-like protein; pho 73.5 53 0.0018 29.7 19.8 151 202-389 24-180 (327)
294 1gen_A Gelatinase A; hydrolase 73.2 43 0.0015 28.6 15.7 143 171-357 35-204 (218)
295 1fwx_A Nitrous oxide reductase 72.9 6.8 0.00023 39.2 7.0 269 131-431 101-452 (595)
296 1nr0_A Actin interacting prote 72.8 78 0.0027 31.4 21.2 28 335-362 459-486 (611)
297 1pex_A Collagenase-3, MMP-13; 72.7 43 0.0015 28.4 14.9 48 335-391 127-183 (207)
298 3vu4_A KMHSV2; beta-propeller 71.3 61 0.0021 29.5 21.1 64 272-356 206-272 (355)
299 2oit_A Nucleoporin 214KDA; NH2 70.1 72 0.0025 30.2 13.7 59 225-298 162-222 (434)
300 3sjl_D Methylamine dehydrogena 69.8 27 0.00092 32.9 10.1 73 272-360 291-368 (386)
301 2cn3_A Xyloglucanase, beta-1,4 68.7 1.1E+02 0.0038 31.4 26.5 252 133-416 37-343 (737)
302 3a0f_A Xyloglucanase; beta-pro 67.4 1.2E+02 0.0041 31.3 21.8 220 132-366 34-295 (763)
303 2xe4_A Oligopeptidase B; hydro 66.2 1.2E+02 0.0042 31.1 15.7 98 192-297 294-398 (751)
304 3dw8_B Serine/threonine-protei 65.4 75 0.0026 29.4 12.7 28 334-361 352-379 (447)
305 1xfd_A DIP, dipeptidyl aminope 64.5 50 0.0017 33.4 11.9 59 192-257 90-150 (723)
306 2oaj_A Protein SNI1; WD40 repe 63.8 1.5E+02 0.0051 31.2 17.8 99 241-359 79-186 (902)
307 3lp9_A LS-24; SEED albumin, pl 63.7 26 0.00089 30.3 8.1 100 175-300 71-202 (227)
308 3s94_A LRP-6, low-density lipo 63.7 1.3E+02 0.0043 30.3 20.6 169 176-389 51-230 (619)
309 1k32_A Tricorn protease; prote 63.6 1.6E+02 0.0054 31.5 21.3 195 141-362 33-242 (1045)
310 1itv_A MMP9; adaptive molecula 62.7 67 0.0023 26.8 11.4 99 176-301 64-176 (195)
311 3iuj_A Prolyl endopeptidase; h 62.2 1.4E+02 0.0047 30.2 20.5 184 193-407 155-358 (693)
312 2mad_H Methylamine dehydrogena 62.1 99 0.0034 28.6 26.1 99 142-253 48-159 (373)
313 3dw8_B Serine/threonine-protei 61.3 1E+02 0.0035 28.5 14.6 67 335-408 188-258 (447)
314 1sqj_A OXG-RCBH, oligoxylogluc 58.4 1.7E+02 0.0059 30.2 25.6 267 133-417 29-340 (789)
315 1hxn_A Hemopexin, HPX; heme, b 58.4 87 0.003 26.7 13.7 49 335-391 126-188 (219)
316 2qe8_A Uncharacterized protein 58.3 1.1E+02 0.0036 27.7 16.0 123 224-361 27-161 (343)
317 2ece_A 462AA long hypothetical 56.4 1.4E+02 0.0049 28.6 14.3 30 335-364 332-362 (462)
318 1jof_A Carboxy-CIS,CIS-muconat 56.4 1.2E+02 0.004 27.6 14.3 23 335-357 321-343 (365)
319 2j04_A TAU60, YPL007P, hypothe 53.0 1.9E+02 0.0063 28.9 14.6 110 224-357 96-213 (588)
320 1fwx_A Nitrous oxide reductase 52.3 80 0.0028 31.5 10.3 74 176-255 101-191 (595)
321 1xfd_A DIP, dipeptidyl aminope 51.8 1E+02 0.0035 31.0 11.7 104 194-305 38-149 (723)
322 2kwv_A RAD30 homolog B, DNA po 51.1 11 0.00037 23.2 2.3 27 73-99 13-39 (48)
323 1su3_A Interstitial collagenas 50.3 1.1E+02 0.0037 29.4 10.7 100 176-303 318-436 (450)
324 3kya_A Putative phosphatase; s 47.6 81 0.0028 30.8 9.4 107 224-354 151-277 (496)
325 1z68_A Fibroblast activation p 47.0 2.3E+02 0.0078 28.4 13.4 17 346-362 337-353 (719)
326 1ck7_A Protein (gelatinase A); 43.7 72 0.0025 32.1 8.5 148 171-357 448-617 (631)
327 4hvt_A Ritya.17583.B, post-pro 43.6 2.8E+02 0.0096 28.3 14.2 148 193-365 269-439 (711)
328 3ba0_A Macrophage metalloelast 38.7 2.4E+02 0.0082 26.0 13.2 104 176-304 236-355 (365)
329 3c7x_A Matrix metalloproteinas 37.9 1.7E+02 0.006 24.2 11.9 102 175-301 60-177 (196)
330 3ju4_A Endo-N-acetylneuraminid 37.0 2.8E+02 0.0095 26.3 11.4 127 250-393 269-408 (670)
331 2j04_A TAU60, YPL007P, hypothe 35.3 3.5E+02 0.012 26.9 16.7 136 194-361 108-260 (588)
332 3qqz_A Putative uncharacterize 32.2 2.5E+02 0.0086 24.4 17.7 180 176-389 38-241 (255)
333 3sre_A PON1, serum paraoxonase 31.0 3.1E+02 0.011 25.1 10.5 143 192-355 82-252 (355)
334 2be1_A Serine/threonine-protei 29.9 48 0.0016 30.6 4.3 26 335-360 55-81 (339)
335 2p9w_A MAL S 1 allergenic prot 29.1 3.3E+02 0.011 24.8 19.7 145 192-356 34-216 (334)
336 3q6k_A 43.2 kDa salivary prote 29.0 3.6E+02 0.012 25.1 16.3 203 176-391 97-343 (381)
337 2be1_A Serine/threonine-protei 28.8 99 0.0034 28.4 6.3 112 132-257 11-139 (339)
338 2oaj_A Protein SNI1; WD40 repe 26.1 5.8E+02 0.02 26.6 18.1 26 335-360 222-247 (902)
339 4hvt_A Ritya.17583.B, post-pro 25.8 5.4E+02 0.018 26.2 13.0 102 240-359 268-385 (711)
340 2xe4_A Oligopeptidase B; hydro 25.7 5.4E+02 0.018 26.1 16.2 149 140-306 294-465 (751)
341 1sqj_A OXG-RCBH, oligoxylogluc 23.5 6.1E+02 0.021 26.0 24.2 203 195-421 39-280 (789)
342 4gq1_A NUP37; propeller, trans 22.5 3.4E+02 0.012 24.6 9.1 63 272-357 155-220 (393)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3e-45 Score=347.82 Aligned_cols=281 Identities=24% Similarity=0.354 Sum_probs=243.5
Q ss_pred HhhcCcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCC---CCc
Q 013929 113 SLIRSGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGREL---TAH 189 (433)
Q Consensus 113 ~ll~~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~---~~~ 189 (433)
++..++.+|++||..+. ..+++++||+.+++|..++++|.+|.. +++++++++||++||.. ...
T Consensus 20 ~~~~~~~i~v~GG~~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~lyv~GG~~~~~~~~ 86 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQ---------SLSYLEAYNPSNGTWLRLADLQVPRSG----LAGCVVGGLLYAVGGRNNSPDGN 86 (308)
T ss_dssp -CCCCCCEEEECCBSSS---------BCCCEEEEETTTTEEEECCCCSSCCBS----CEEEEETTEEEEECCEEEETTEE
T ss_pred ccCCCCEEEEEeCcCCC---------CcceEEEEcCCCCeEeECCCCCccccc----ceEEEECCEEEEECCCcCCCCCC
Confidence 35678999999998332 367899999999999999999998854 45678899999999983 333
Q ss_pred ccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEE
Q 013929 190 HISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGV 269 (433)
Q Consensus 190 ~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~ 269 (433)
...+++++||+.+++|++++++|.+|..|++++++++|||+||.+.. ..++++++||+.+++|+.++++|.+|..++++
T Consensus 87 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 165 (308)
T 1zgk_A 87 TDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRRIGVGVA 165 (308)
T ss_dssp EECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred eecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCccccceEEE
Confidence 46678999999999999999999999999999999999999998764 45789999999999999999999999999999
Q ss_pred EECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC-----
Q 013929 270 FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA----- 344 (433)
Q Consensus 270 ~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~----- 344 (433)
+++++||++||.++. ..++++++||+.+++|+.++++|.+|..+ ++++++++||++||.
T Consensus 166 ~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~iyv~GG~~~~~~ 229 (308)
T 1zgk_A 166 VLNRLLYAVGGFDGT--NRLNSAECYYPERNEWRMITAMNTIRSGA--------------GVCVLHNCIYAAGGYDGQDQ 229 (308)
T ss_dssp EETTEEEEECCBCSS--CBCCCEEEEETTTTEEEECCCCSSCCBSC--------------EEEEETTEEEEECCBCSSSB
T ss_pred EECCEEEEEeCCCCC--CcCceEEEEeCCCCeEeeCCCCCCccccc--------------eEEEECCEEEEEeCCCCCCc
Confidence 999999999998743 34788999999999999999999999987 788999999999985
Q ss_pred CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccCCCcE
Q 013929 345 DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQSANF 424 (433)
Q Consensus 345 ~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p~~~~ 424 (433)
.+++++||+++++|+++.++|.++. +++++.++++|||+||.... .....+.+| |+.+++|+.+++||.+|.
T Consensus 230 ~~~v~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~-~~~~~v~~y--d~~~~~W~~~~~~p~~r~ 301 (308)
T 1zgk_A 230 LNSVERYDVETETWTFVAPMKHRRS-----ALGITVHQGRIYVLGGYDGH-TFLDSVECY--DPDTDTWSEVTRMTSGRS 301 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCB-----SCEEEEETTEEEEECCBCSS-CBCCEEEEE--ETTTTEEEEEEECSSCCB
T ss_pred cceEEEEeCCCCcEEECCCCCCCcc-----ceEEEEECCEEEEEcCcCCC-cccceEEEE--cCCCCEEeecCCCCCCcc
Confidence 3789999999999999999998875 36777889999999998653 233445545 447899999999999999
Q ss_pred EEEEEEe
Q 013929 425 VYNCAVM 431 (433)
Q Consensus 425 ~~~~~v~ 431 (433)
.|+++++
T Consensus 302 ~~~~~~l 308 (308)
T 1zgk_A 302 GVGVAVT 308 (308)
T ss_dssp SCEEEEC
T ss_pred cceeEeC
Confidence 9999985
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.9e-45 Score=344.64 Aligned_cols=280 Identities=23% Similarity=0.351 Sum_probs=242.8
Q ss_pred cCcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeE
Q 013929 116 RSGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVI 195 (433)
Q Consensus 116 ~~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 195 (433)
..+.+|++||.... ..+++++||+.+++|..++++|.+|.. +++++++++||++||.... ...+++
T Consensus 14 ~~~~i~v~GG~~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~lyv~GG~~~~-~~~~~~ 79 (302)
T 2xn4_A 14 LPKLMVVVGGQAPK---------AIRSVECYDFKEERWHQVAELPSRRCR----AGMVYMAGLVFAVGGFNGS-LRVRTV 79 (302)
T ss_dssp -CEEEEEECCBSSS---------BCCCEEEEETTTTEEEEECCCSSCCBS----CEEEEETTEEEEESCBCSS-SBCCCE
T ss_pred CCCEEEEECCCCCC---------CCCcEEEEcCcCCcEeEcccCCccccc----ceEEEECCEEEEEeCcCCC-ccccce
Confidence 46789999997653 356799999999999999999998854 4467889999999998543 456789
Q ss_pred EEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEE
Q 013929 196 YRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKF 275 (433)
Q Consensus 196 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~l 275 (433)
++||+.+++|++++++|.+|..|++++++++|||+||.+.. ..++++++||+.+++|+.++++|.+|..+++++++++|
T Consensus 80 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i 158 (302)
T 2xn4_A 80 DSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLL 158 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEE
Confidence 99999999999999999999999999999999999998765 46789999999999999999999999999999999999
Q ss_pred EEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC-----CCeEEE
Q 013929 276 YVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA-----DMEVRK 350 (433)
Q Consensus 276 yv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~-----~~~i~~ 350 (433)
|++||.++.....++++++||+.+++|+.++++|.+|..| ++++++++||++||. .+++++
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~iyv~GG~~~~~~~~~~~~ 224 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA--------------GVGVLNNLLYAVGGHDGPLVRKSVEV 224 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC--------------EEEEETTEEEEECCBSSSSBCCCEEE
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc--------------cEEEECCEEEEECCCCCCcccceEEE
Confidence 9999998554456789999999999999999999999987 788999999999985 368999
Q ss_pred EeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEec-ccCCCcEEEEEE
Q 013929 351 YDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLA-RKQSANFVYNCA 429 (433)
Q Consensus 351 yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~-~~p~~~~~~~~~ 429 (433)
||+++++|+.++.+|.++. +++++.++++||++||..... ....+.+|++ .+++|+.++ .||.+|..|+++
T Consensus 225 yd~~~~~W~~~~~~~~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~--~~~~W~~~~~~~~~~r~~~~~~ 296 (302)
T 2xn4_A 225 YDPTTNAWRQVADMNMCRR-----NAGVCAVNGLLYVVGGDDGSC-NLASVEYYNP--TTDKWTVVSSCMSTGRSYAGVT 296 (302)
T ss_dssp EETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCBCSSS-BCCCEEEEET--TTTEEEECSSCCSSCCBSCEEE
T ss_pred EeCCCCCEeeCCCCCCccc-----cCeEEEECCEEEEECCcCCCc-ccccEEEEcC--CCCeEEECCcccCcccccceEE
Confidence 9999999999999998875 366778899999999986432 3344444544 789999997 899999999999
Q ss_pred Eec
Q 013929 430 VMG 432 (433)
Q Consensus 430 v~~ 432 (433)
+++
T Consensus 297 ~~~ 299 (302)
T 2xn4_A 297 VID 299 (302)
T ss_dssp EEE
T ss_pred Eec
Confidence 875
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.4e-45 Score=345.04 Aligned_cols=276 Identities=21% Similarity=0.287 Sum_probs=240.6
Q ss_pred CcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEE
Q 013929 117 SGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIY 196 (433)
Q Consensus 117 ~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 196 (433)
.+.+|++||... .+++++||+.+++|..++++|.+|.. +++++++++||++||.. ....++++
T Consensus 11 ~~~l~~~GG~~~-----------~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~lyv~GG~~--~~~~~~~~ 73 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----------PQSCRYFNPKDYSWTDIRCPFEKRRD----AACVFWDNVVYILGGSQ--LFPIKRMD 73 (306)
T ss_dssp CCEEEEEECCSS-----------TTSEEEEETTTTEEEECCCCSCCCBS----CEEEEETTEEEEECCBS--SSBCCEEE
T ss_pred cceEEEEeCCCC-----------CceEEEecCCCCCEecCCCCCcccce----eEEEEECCEEEEEeCCC--CCCcceEE
Confidence 477999998654 45789999999999999999998854 45688999999999986 45678999
Q ss_pred EEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEE
Q 013929 197 RYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFY 276 (433)
Q Consensus 197 ~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~ly 276 (433)
+||+.+++|+.++++|.+|..|++++++++|||+||.+.....++++++||+.+++|+.++++|.+|..|++++++++||
T Consensus 74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 153 (306)
T 3ii7_A 74 CYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIY 153 (306)
T ss_dssp EEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred EEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEE
Confidence 99999999999999999999999999999999999987445678999999999999999999999999999999999999
Q ss_pred EEccccCCCC--cccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC-----CCeEE
Q 013929 277 VIGGIGGSDS--KVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA-----DMEVR 349 (433)
Q Consensus 277 v~GG~~~~~~--~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~-----~~~i~ 349 (433)
++||..+... ..++++++||+.+++|+.++++|.+|..| ++++++++||++||. .++++
T Consensus 154 v~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 154 VCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNH--------------GLVFVKDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp EECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSC--------------EEEEETTEEEEECCEETTEEBCCEE
T ss_pred EECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcc--------------eEEEECCEEEEEeCCCCCCCCceEE
Confidence 9999874321 23789999999999999999999999987 788999999999984 36899
Q ss_pred EEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccCCCcEEEEEE
Q 013929 350 KYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQSANFVYNCA 429 (433)
Q Consensus 350 ~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p~~~~~~~~~ 429 (433)
+||+.+++|+.++++|.++. +++++.++++|||+||..... ....+ |.||+.+++|+.+++||.+|..|+++
T Consensus 220 ~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~~--~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 220 YYDIKLNEWKMVSPMPWKGV-----TVKCAAVGSIVYVLAGFQGVG-RLGHI--LEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp EEETTTTEEEECCCCSCCBS-----CCEEEEETTEEEEEECBCSSS-BCCEE--EEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred EeeCCCCcEEECCCCCCCcc-----ceeEEEECCEEEEEeCcCCCe-eeeeE--EEEcCCCCeEEeCCCcccccceeEEE
Confidence 99999999999999998875 367778899999999986542 33444 45555789999999999999999988
Q ss_pred Ee
Q 013929 430 VM 431 (433)
Q Consensus 430 v~ 431 (433)
++
T Consensus 292 ~~ 293 (306)
T 3ii7_A 292 CV 293 (306)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.4e-44 Score=337.80 Aligned_cols=279 Identities=22% Similarity=0.339 Sum_probs=242.5
Q ss_pred cCcceeeecc-ccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCccccee
Q 013929 116 RSGELYRLRR-LNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHV 194 (433)
Q Consensus 116 ~~~~~~~~gg-~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 194 (433)
.++.+|++|| ..... ..+++++||+.+++|..++++|.+|.. +++++++++||++||.. .....++
T Consensus 13 ~~~~i~~~GG~~~~~~--------~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~l~v~GG~~-~~~~~~~ 79 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQS--------PIDVVEKYDPKTQEWSFLPSITRKRRY----VASVSLHDRIYVIGGYD-GRSRLSS 79 (301)
T ss_dssp CCEEEEEECCEETTTE--------ECCCEEEEETTTTEEEECCCCSSCCBS----CEEEEETTEEEEECCBC-SSCBCCC
T ss_pred CCCEEEEEeCccCCCc--------ceeEEEEEcCCCCeEEeCCCCChhhcc----ccEEEECCEEEEEcCCC-CCccCce
Confidence 5788999999 44332 467899999999999999999988754 45688899999999985 3346778
Q ss_pred EEEEEcCCCc---eecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE
Q 013929 195 IYRYSILTNS---WSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM 271 (433)
Q Consensus 195 ~~~yd~~t~~---W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~ 271 (433)
+++||+.+++ |+.++++|.+|..|++++++++|||+||.++. ..++++++||+.+++|+.++++|.+|..|+++++
T Consensus 80 ~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 80 VECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA 158 (301)
T ss_dssp EEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE
T ss_pred EEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCcccceEEEE
Confidence 9999999999 99999999999999999999999999998865 4578999999999999999999999999999999
Q ss_pred CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC-----CC
Q 013929 272 DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA-----DM 346 (433)
Q Consensus 272 ~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~-----~~ 346 (433)
+++||++||.++. ...+++++||+.+++|+.++++|.+|..+ ++++++++||++||. .+
T Consensus 159 ~~~iyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~i~v~GG~~~~~~~~ 222 (301)
T 2vpj_A 159 SGVIYCLGGYDGL--NILNSVEKYDPHTGHWTNVTPMATKRSGA--------------GVALLNDHIYVVGGFDGTAHLS 222 (301)
T ss_dssp TTEEEEECCBCSS--CBCCCEEEEETTTTEEEEECCCSSCCBSC--------------EEEEETTEEEEECCBCSSSBCC
T ss_pred CCEEEEECCCCCC--cccceEEEEeCCCCcEEeCCCCCcccccc--------------eEEEECCEEEEEeCCCCCcccc
Confidence 9999999998743 36789999999999999999999999987 788999999999985 46
Q ss_pred eEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccCCCcEEE
Q 013929 347 EVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQSANFVY 426 (433)
Q Consensus 347 ~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p~~~~~~ 426 (433)
++++||+++++|++++.+|.++. +++++.++++||++||..... .... +|.|++++++|+.+++||.+|..|
T Consensus 223 ~v~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~--v~~yd~~~~~W~~~~~~~~~r~~~ 294 (301)
T 2vpj_A 223 SVEAYNIRTDSWTTVTSMTTPRC-----YVGATVLRGRLYAIAGYDGNS-LLSS--IECYDPIIDSWEVVTSMGTQRCDA 294 (301)
T ss_dssp CEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCBCSSS-BEEE--EEEEETTTTEEEEEEEEEEEEESC
T ss_pred eEEEEeCCCCcEEECCCCCCccc-----ceeEEEECCEEEEEcCcCCCc-cccc--EEEEcCCCCeEEEcCCCCcccccc
Confidence 89999999999999999998875 366778899999999986532 3344 445555789999999999999999
Q ss_pred EEEEec
Q 013929 427 NCAVMG 432 (433)
Q Consensus 427 ~~~v~~ 432 (433)
+++++.
T Consensus 295 ~~~~~~ 300 (301)
T 2vpj_A 295 GVCVLR 300 (301)
T ss_dssp EEEEEE
T ss_pred eEEEeC
Confidence 999863
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=328.44 Aligned_cols=265 Identities=19% Similarity=0.274 Sum_probs=222.4
Q ss_pred ceEEEEecCCCcEEeCCCCCC--ccccccCCceEEEECCEEEEECCCC-----CCcccceeEEEEEcCCCceecCCCCCC
Q 013929 141 LEWEAFDPIRRRWMHLPRMTS--NECFMCSDKESLAVGTELLVFGREL-----TAHHISHVIYRYSILTNSWSSGMRMNA 213 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~--~~~~~~~~~~~~~~~~~iyv~GG~~-----~~~~~~~~~~~yd~~t~~W~~~~~~p~ 213 (433)
.++++|||.+++|.. +++|. +|. .+++++++++||++||.. ......+++++||+.+++|+.++++|.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 87 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKN----HVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS 87 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSS----EEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS
T ss_pred CceEEECCCCCeEec-CCCCCCCCcc----ceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc
Confidence 468899999999987 66654 453 345677899999999962 223345679999999999999999999
Q ss_pred CcceeeEEEeCCEEEEEccCC--CCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccce
Q 013929 214 PRCLFGSASLGEIAILAGGSD--LEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTC 291 (433)
Q Consensus 214 ~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~ 291 (433)
+|..|++++++++|||+||.+ .....++++++||+.+++|+.++++|.+|..|++++++++||++||.. .....+++
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~ 166 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKG-SDRKCLNK 166 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC-TTSCBCCC
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCC-CCCcccce
Confidence 999999999999999999975 234578999999999999999999999999999999999999999985 23457889
Q ss_pred EEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCC-----CeEEEEeCCCCcEEEeccCCC
Q 013929 292 GEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYAD-----MEVRKYDKERRLWFTIGRLPE 366 (433)
Q Consensus 292 v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~-----~~i~~yd~~~~~W~~v~~lp~ 366 (433)
+++||+.+++|+.++++|.+|..| ++++++++||++||.. +++++||+++++|+.++++|.
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 232 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLF--------------GATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSC--------------EEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS
T ss_pred EEEEeCCCCeEEECCCCCCchhce--------------EEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC
Confidence 999999999999999999999997 7889999999999853 479999999999999999998
Q ss_pred cccCCCcccEEEEEeCCEEEEEcCCCCC---CCC---eeEEEEeecCCCCCCceEecccCCCcEEEEEEEec
Q 013929 367 RANSMNGWGLAFRACGDRLIVIGGPKAS---GEG---FIELNSWVPSEGPPQWNLLARKQSANFVYNCAVMG 432 (433)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~v~GG~~~~---~~~---~~~~~~~~~~~~~~~W~~v~~~p~~~~~~~~~v~~ 432 (433)
++. +++++.++++|||+||.... ... .....+|.||+.+++|+.+ +|.+|..|++++++
T Consensus 233 ~r~-----~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~ 297 (315)
T 4asc_A 233 ERS-----SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLP 297 (315)
T ss_dssp CCB-----SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEE
T ss_pred ccc-----ceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeC
Confidence 885 36778899999999998531 111 2334566777789999999 67778888888764
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-41 Score=321.81 Aligned_cols=274 Identities=15% Similarity=0.284 Sum_probs=225.5
Q ss_pred CcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCC--CccccccCCceEEEECCEEEEECCCCCC-----c
Q 013929 117 SGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMT--SNECFMCSDKESLAVGTELLVFGRELTA-----H 189 (433)
Q Consensus 117 ~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p--~~~~~~~~~~~~~~~~~~iyv~GG~~~~-----~ 189 (433)
.+.+|.+||. .+++|||.+++|... +++ .+|. .+++++.+++||++||.... .
T Consensus 15 ~~~i~~~GG~---------------~~~~yd~~~~~W~~~-~~~~~~~r~----~~~~~~~~~~lyv~GG~~~~~~~~~~ 74 (318)
T 2woz_A 15 KDLILLVNDT---------------AAVAYDPMENECYLT-ALAEQIPRN----HSSIVTQQNQVYVVGGLYVDEENKDQ 74 (318)
T ss_dssp EEEEEEECSS---------------EEEEEETTTTEEEEE-EECTTSCSS----EEEEECSSSCEEEEESSCC-------
T ss_pred cchhhhcccc---------------ceEEECCCCCceecc-cCCccCCcc----ceEEEEECCEEEEECCcccCccccCC
Confidence 4567777762 367899999999984 343 4453 34567789999999996311 1
Q ss_pred ccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCC-CCCcCCceEEEeCCCCCeEEcCCCCCCCcceeE
Q 013929 190 HISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDL-EGNILSSAEMYNSETQTWKVLPSMKNPRKMCSG 268 (433)
Q Consensus 190 ~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 268 (433)
...+++++||+.+++|++++++|.+|..|++++++++|||+||.+. ....++++++||+.+++|+.++++|.+|..|++
T Consensus 75 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 154 (318)
T 2woz_A 75 PLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNV 154 (318)
T ss_dssp CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEE
T ss_pred CccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEE
Confidence 2345699999999999999999999999999999999999999863 335688999999999999999999999999999
Q ss_pred EEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC----
Q 013929 269 VFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA---- 344 (433)
Q Consensus 269 ~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~---- 344 (433)
++++++||++||... ....++++++||+.+++|+.++++|.+|..| ++++++++||++||.
T Consensus 155 ~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~iyv~GG~~~~~ 219 (318)
T 2woz_A 155 ISHNGMIYCLGGKTD-DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF--------------GVAIHKGKIVIAGGVTEDG 219 (318)
T ss_dssp EEETTEEEEECCEES-SSCBCCCEEEEETTTTEEEEECCCSSCCBSC--------------EEEEETTEEEEEEEEETTE
T ss_pred EEECCEEEEEcCCCC-CCCccceEEEEcCCCCEEEECCCCCCCcccc--------------eEEEECCEEEEEcCcCCCC
Confidence 999999999999863 3456788999999999999999999999987 788999999999984
Q ss_pred -CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCC------CeeEEEEeecCCCCCCceEec
Q 013929 345 -DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGE------GFIELNSWVPSEGPPQWNLLA 417 (433)
Q Consensus 345 -~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~------~~~~~~~~~~~~~~~~W~~v~ 417 (433)
.+++++||+++++|+.++++|.++. +++++.++++||++||...... ......+|.||+.+++|+.+
T Consensus 220 ~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~- 293 (318)
T 2woz_A 220 LSASVEAFDLKTNKWEVMTEFPQERS-----SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM- 293 (318)
T ss_dssp EEEEEEEEETTTCCEEECCCCSSCCB-----SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-
T ss_pred ccceEEEEECCCCeEEECCCCCCccc-----ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-
Confidence 3689999999999999999998875 3677889999999999864210 01223456666688999999
Q ss_pred ccCCCcEEEEEEEec
Q 013929 418 RKQSANFVYNCAVMG 432 (433)
Q Consensus 418 ~~p~~~~~~~~~v~~ 432 (433)
+|..|+.|++++++
T Consensus 294 -~~~~r~~~~~~~~~ 307 (318)
T 2woz_A 294 -LKEIRYASGASCLA 307 (318)
T ss_dssp -ESCCGGGTTCEEEE
T ss_pred -cccccccccceeeC
Confidence 88999999888764
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=9.3e-40 Score=316.32 Aligned_cols=269 Identities=17% Similarity=0.198 Sum_probs=213.4
Q ss_pred hcCcceeeeccccCccccEEEEeeccceEEEEecC--CCcEEeCCCCC-CccccccCCceEEEECCEEEEECCC-C---C
Q 013929 115 IRSGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPI--RRRWMHLPRMT-SNECFMCSDKESLAVGTELLVFGRE-L---T 187 (433)
Q Consensus 115 l~~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~--~~~W~~l~~~p-~~~~~~~~~~~~~~~~~~iyv~GG~-~---~ 187 (433)
+.++.+|++||..+ +++++||+. +++|..++++| .+|.. +++++++++|||+||. . .
T Consensus 17 ~~~~~iyv~GG~~~------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~----~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 17 IDNDTVYIGLGSAG------------TAWYKLDTQAKDKKWTALAAFPGGPRDQ----ATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp EETTEEEEECGGGT------------TCEEEEETTSSSCCEEECCCCTTCCCBS----CEEEEETTEEEEECCEEECTTS
T ss_pred EECCEEEEEeCcCC------------CeEEEEccccCCCCeeECCCCCCCcCcc----ceEEEECCEEEEEcCCCCCCCc
Confidence 45899999999764 258899997 49999999999 77754 4568889999999998 2 2
Q ss_pred CcccceeEEEEEcCCCceecCCCCC-CCcceeeEEEeCCEEEEEccCCCCC-----------------------------
Q 013929 188 AHHISHVIYRYSILTNSWSSGMRMN-APRCLFGSASLGEIAILAGGSDLEG----------------------------- 237 (433)
Q Consensus 188 ~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~----------------------------- 237 (433)
.....+++++||+.+++|+++++++ .+|..|++++++++|||+||.+...
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 3446788999999999999999988 8999999999999999999986431
Q ss_pred ----CcCCceEEEeCCCCCeEEcCCCCCCCcc-eeEEEECCEEEEEccccCCCCcccceEEEEEC--CCCceEecCCCCC
Q 013929 238 ----NILSSAEMYNSETQTWKVLPSMKNPRKM-CSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDL--ETETWTEIPNMSP 310 (433)
Q Consensus 238 ----~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~--~t~~W~~~~~~p~ 310 (433)
..++++++||+.+++|+.++++|.+|.. +++++++++||++||..+. ....+++++||+ .+++|+.+++++.
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~v~~~d~d~~~~~W~~~~~~~~ 239 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKP-GLRTDAVFELDFTGNNLKWNKLAPVSS 239 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEET-TEECCCEEEEECC---CEEEECCCSST
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCC-CcccCceEEEEecCCCCcEEecCCCCC
Confidence 2468999999999999999999987655 8999999999999998732 345678899986 9999999998876
Q ss_pred CCC--CCCCCCcCCCCcCCCCEEEEECCEEEEEecCC----------------------CeEEEEeCCCCcEEEeccCCC
Q 013929 311 ARG--GAARGTEMPASAEAPPLVAVVNNELYAADYAD----------------------MEVRKYDKERRLWFTIGRLPE 366 (433)
Q Consensus 311 ~r~--~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~----------------------~~i~~yd~~~~~W~~v~~lp~ 366 (433)
+|. .+ ++++++++||++||.. .++++||+++++|++++.+|.
T Consensus 240 ~~~~~~~--------------~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 305 (357)
T 2uvk_A 240 PDGVAGG--------------FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ 305 (357)
T ss_dssp TTCCBSC--------------EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS
T ss_pred Ccccccc--------------eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC
Confidence 654 43 6899999999999842 368999999999999999998
Q ss_pred cccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccCC
Q 013929 367 RANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQS 421 (433)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p~ 421 (433)
+|.. ++++.++++|||+||.+..+....++..+++ ++++|.++.+.|.
T Consensus 306 ~r~~-----~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~--~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 306 GRAY-----GVSLPWNNSLLIIGGETAGGKAVTDSVLITV--KDNKVTVQNLEHH 353 (357)
T ss_dssp CCBS-----SEEEEETTEEEEEEEECGGGCEEEEEEEEEC---CCSCEEEC----
T ss_pred Cccc-----ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEE--cCcEeEeeecccc
Confidence 8853 5667899999999998765433444544455 6899999987764
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-38 Score=301.13 Aligned_cols=237 Identities=21% Similarity=0.287 Sum_probs=204.5
Q ss_pred ceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCC---CCCCcCCceEEE
Q 013929 170 KESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSD---LEGNILSSAEMY 246 (433)
Q Consensus 170 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~y 246 (433)
+..+.+++.||++||. .....+++++||+.+++|+.++++|.+|..|++++++++|||+||.. .....++++++|
T Consensus 18 ~~~~~~~~~i~v~GG~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 95 (308)
T 1zgk_A 18 SHAPKVGRLIYTAGGY--FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCY 95 (308)
T ss_dssp ---CCCCCCEEEECCB--SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEE
T ss_pred ccccCCCCEEEEEeCc--CCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEE
Confidence 3457789999999998 33467789999999999999999999999999999999999999983 223467899999
Q ss_pred eCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 247 NSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 247 d~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
|+.+++|+.++++|.+|..+++++++++||++||..+ ...++++++||+.+++|+.++++|.+|..+
T Consensus 96 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~----------- 162 (308)
T 1zgk_A 96 NPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG--CIHHNSVERYEPERDEWHLVAPMLTRRIGV----------- 162 (308)
T ss_dssp ETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEET--TEECCCEEEEETTTTEEEECCCCSSCCBSC-----------
T ss_pred CCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCC--CcccccEEEECCCCCeEeECCCCCccccce-----------
Confidence 9999999999999999999999999999999999874 346788999999999999999999999987
Q ss_pred CCCEEEEECCEEEEEecC-----CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEE
Q 013929 327 APPLVAVVNNELYAADYA-----DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIEL 401 (433)
Q Consensus 327 ~~~~~~~~~~~ly~~gg~-----~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 401 (433)
++++++++||++||. .+++++||+.+++|+.++++|.++. +++++.++++|||+||..... ....+
T Consensus 163 ---~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~-~~~~v 233 (308)
T 1zgk_A 163 ---GVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS-----GAGVCVLHNCIYAAGGYDGQD-QLNSV 233 (308)
T ss_dssp ---EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-----SCEEEEETTEEEEECCBCSSS-BCCCE
T ss_pred ---EEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-----cceEEEECCEEEEEeCCCCCC-ccceE
Confidence 788899999999985 3689999999999999999998875 367778899999999986432 23344
Q ss_pred EEeecCCCCCCceEecccCCCcEEEEEEEec
Q 013929 402 NSWVPSEGPPQWNLLARKQSANFVYNCAVMG 432 (433)
Q Consensus 402 ~~~~~~~~~~~W~~v~~~p~~~~~~~~~v~~ 432 (433)
|.+|+.+++|+.++++|.+|..|++++++
T Consensus 234 --~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 262 (308)
T 1zgk_A 234 --ERYDVETETWTFVAPMKHRRSALGITVHQ 262 (308)
T ss_dssp --EEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred --EEEeCCCCcEEECCCCCCCccceEEEEEC
Confidence 45555789999999999999999988764
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=300.55 Aligned_cols=245 Identities=17% Similarity=0.299 Sum_probs=209.4
Q ss_pred hhcCcceeeecccc----CccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCC--C
Q 013929 114 LIRSGELYRLRRLN----GVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGREL--T 187 (433)
Q Consensus 114 ll~~~~~~~~gg~~----~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~--~ 187 (433)
++.++.+|++||.. .... ...++++.||+.+++|..++++|.+|.. +++++++++||++||.. .
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~------~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~lyv~GG~~~~~ 111 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKED------PMSAYFLQFDHLDSEWLGMPPLPSPRCL----FGLGEALNSIYVVGGREIKD 111 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSS------CEEEEEEEEETTTTEEEECCCBSSCEES----CEEEEETTEEEEECCEESST
T ss_pred EEECCEEEEEcCcccCCCCCcc------ccccceEEecCCCCeEEECCCCCcchhc----eeEEEECCEEEEEeCCcCCC
Confidence 34689999999963 1111 1234689999999999999999998854 45688899999999974 2
Q ss_pred CcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCccee
Q 013929 188 AHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCS 267 (433)
Q Consensus 188 ~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~ 267 (433)
.....+++++||+.+++|++++++|.+|..|++++++++|||+||.......++++++||+.+++|+.++++|.+|..|+
T Consensus 112 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 191 (315)
T 4asc_A 112 GERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG 191 (315)
T ss_dssp TCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred CCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceE
Confidence 34577889999999999999999999999999999999999999996555678999999999999999999999999999
Q ss_pred EEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCC--
Q 013929 268 GVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYAD-- 345 (433)
Q Consensus 268 ~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~-- 345 (433)
+++++++||++||.++. ...+++++||+++++|+.++++|.+|..+ ++++++++||++||..
T Consensus 192 ~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~l~v~GG~~~~ 255 (315)
T 4asc_A 192 ATVHDGRIIVAAGVTDT--GLTSSAEVYSITDNKWAPFEAFPQERSSL--------------SLVSLVGTLYAIGGFATL 255 (315)
T ss_dssp EEEETTEEEEEEEECSS--SEEEEEEEEETTTTEEEEECCCSSCCBSC--------------EEEEETTEEEEEEEEEEE
T ss_pred EEEECCEEEEEeccCCC--CccceEEEEECCCCeEEECCCCCCcccce--------------eEEEECCEEEEECCcccc
Confidence 99999999999998743 46789999999999999999999999997 7889999999999852
Q ss_pred ------------CeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCC
Q 013929 346 ------------MEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGP 391 (433)
Q Consensus 346 ------------~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~ 391 (433)
+++++||+++++|+++ ++.++. +++++.++++||++...
T Consensus 256 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~-----~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 256 ETESGELVPTELNDIWRYNEEEKKWEGV--LREIAY-----AAGATFLPVRLNVLRLT 306 (315)
T ss_dssp ECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSC-----CSSCEEEEEEECGGGSE
T ss_pred CcCCccccccccCcEEEecCCCChhhhh--ccCCcC-----ccceEEeCCEEEEEEeh
Confidence 4799999999999999 344443 25567789999998753
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=293.60 Aligned_cols=237 Identities=23% Similarity=0.403 Sum_probs=206.3
Q ss_pred hcCcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCccccee
Q 013929 115 IRSGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHV 194 (433)
Q Consensus 115 l~~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 194 (433)
+.++.+|++||..+.. ..++++.||+.+++|..++++|.+|.. +++++++++||++||.... ...++
T Consensus 59 ~~~~~lyv~GG~~~~~--------~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~iyv~GG~~~~-~~~~~ 125 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSL--------RVRTVDSYDPVKDQWTSVANMRDRRST----LGAAVLNGLLYAVGGFDGS-TGLSS 125 (302)
T ss_dssp EETTEEEEESCBCSSS--------BCCCEEEEETTTTEEEEECCCSSCCBS----CEEEEETTEEEEEEEECSS-CEEEE
T ss_pred EECCEEEEEeCcCCCc--------cccceEEECCCCCceeeCCCCCccccc----eEEEEECCEEEEEcCCCCC-ccCce
Confidence 4589999999987653 357899999999999999999998854 4568889999999998543 45688
Q ss_pred EEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCC-CcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECC
Q 013929 195 IYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEG-NILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDG 273 (433)
Q Consensus 195 ~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g 273 (433)
+++||+.+++|+.++++|.+|..|++++++++|||+||.+... ..++++++||+.+++|+.++++|.+|..++++++++
T Consensus 126 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 205 (302)
T 2xn4_A 126 VEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNN 205 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECC
Confidence 9999999999999999999999999999999999999987653 357899999999999999999999999999999999
Q ss_pred EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCC-----CeE
Q 013929 274 KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYAD-----MEV 348 (433)
Q Consensus 274 ~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~-----~~i 348 (433)
+||++||.++ ....+++++||+++++|+.++++|.+|..+ ++++++++||++||.. +++
T Consensus 206 ~iyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~--------------~~~~~~~~i~v~GG~~~~~~~~~v 269 (302)
T 2xn4_A 206 LLYAVGGHDG--PLVRKSVEVYDPTTNAWRQVADMNMCRRNA--------------GVCAVNGLLYVVGGDDGSCNLASV 269 (302)
T ss_dssp EEEEECCBSS--SSBCCCEEEEETTTTEEEEECCCSSCCBSC--------------EEEEETTEEEEECCBCSSSBCCCE
T ss_pred EEEEECCCCC--CcccceEEEEeCCCCCEeeCCCCCCccccC--------------eEEEECCEEEEECCcCCCcccccE
Confidence 9999999874 345788999999999999999999999886 7889999999999853 579
Q ss_pred EEEeCCCCcEEEec-cCCCcccCCCcccEEEEEeCCEE
Q 013929 349 RKYDKERRLWFTIG-RLPERANSMNGWGLAFRACGDRL 385 (433)
Q Consensus 349 ~~yd~~~~~W~~v~-~lp~~~~~~~~~~~~~~~~~~~l 385 (433)
++||+++++|+.++ .||.++.. ++++.++++|
T Consensus 270 ~~yd~~~~~W~~~~~~~~~~r~~-----~~~~~~~~~i 302 (302)
T 2xn4_A 270 EYYNPTTDKWTVVSSCMSTGRSY-----AGVTVIDKRL 302 (302)
T ss_dssp EEEETTTTEEEECSSCCSSCCBS-----CEEEEEEC--
T ss_pred EEEcCCCCeEEECCcccCccccc-----ceEEEecccC
Confidence 99999999999997 88888753 6667777664
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=295.28 Aligned_cols=228 Identities=18% Similarity=0.252 Sum_probs=201.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
.+.||++||... .+++++||+.+++|+.++++|.+|..|++++++++|||+||.+ ...++++++||+.+++|+.
T Consensus 11 ~~~l~~~GG~~~----~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 11 HDYRIALFGGSQ----PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp CCEEEEEECCSS----TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEE
T ss_pred cceEEEEeCCCC----CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEE
Confidence 578999999743 6789999999999999999999999999999999999999988 4568999999999999999
Q ss_pred cCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEEC
Q 013929 256 LPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVN 335 (433)
Q Consensus 256 ~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~ 335 (433)
++++|.+|..|++++++++||++||.+. ....++++++||+.+++|+.++++|.+|..| ++++++
T Consensus 85 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~--------------~~~~~~ 149 (306)
T 3ii7_A 85 KLGPPTPRDSLAACAAEGKIYTSGGSEV-GNSALYLFECYDTRTESWHTKPSMLTQRCSH--------------GMVEAN 149 (306)
T ss_dssp EECCSSCCBSCEEEEETTEEEEECCBBT-TBSCCCCEEEEETTTTEEEEECCCSSCCBSC--------------EEEEET
T ss_pred CCCCCccccceeEEEECCEEEEECCCCC-CCcEeeeEEEEeCCCCceEeCCCCcCCccee--------------EEEEEC
Confidence 9999999999999999999999999872 3456789999999999999999999999987 788999
Q ss_pred CEEEEEecC---------CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 336 NELYAADYA---------DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 336 ~~ly~~gg~---------~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
++||++||. .+++++||+.+++|+.++++|.++. +++++.++++||++||..... .... +|.|
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~--~~~y 221 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK-----NHGLVFVKDKIFAVGGQNGLG-GLDN--VEYY 221 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCEETTE-EBCC--EEEE
T ss_pred CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh-----cceEEEECCEEEEEeCCCCCC-CCce--EEEe
Confidence 999999973 5789999999999999999998875 377788899999999985531 2233 4555
Q ss_pred CCCCCCceEecccCCCcEEEEEEEec
Q 013929 407 SEGPPQWNLLARKQSANFVYNCAVMG 432 (433)
Q Consensus 407 ~~~~~~W~~v~~~p~~~~~~~~~v~~ 432 (433)
|+.+++|+.++++|.+|..|++++++
T Consensus 222 d~~~~~W~~~~~~p~~r~~~~~~~~~ 247 (306)
T 3ii7_A 222 DIKLNEWKMVSPMPWKGVTVKCAAVG 247 (306)
T ss_dssp ETTTTEEEECCCCSCCBSCCEEEEET
T ss_pred eCCCCcEEECCCCCCCccceeEEEEC
Confidence 55789999999999999999998864
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=9.6e-38 Score=297.42 Aligned_cols=248 Identities=19% Similarity=0.293 Sum_probs=209.1
Q ss_pred hhcCcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCC-Ccccc
Q 013929 114 LIRSGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELT-AHHIS 192 (433)
Q Consensus 114 ll~~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~-~~~~~ 192 (433)
++.++.+|++||.....+.. .....+.++.||+.+++|..++++|.+|.. +++++++++||++||... .....
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~~~~iyv~GG~~~~~~~~~ 126 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENK--DQPLQSYFFQLDNVSSEWVGLPPLPSARCL----FGLGEVDDKIYVVAGKDLQTEASL 126 (318)
T ss_dssp ECSSSCEEEEESSCC---------CCCBEEEEEETTTTEEEECSCBSSCBCS----CEEEEETTEEEEEEEEBTTTCCEE
T ss_pred EEECCEEEEECCcccCcccc--CCCccccEEEEeCCCCcEEECCCCCccccc----cceEEECCEEEEEcCccCCCCccc
Confidence 35689999999953211000 001124589999999999999999998854 456888999999999852 34567
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEEC
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMD 272 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~ 272 (433)
+++++||+.+++|+.++++|.+|..|++++++++|||+||.......++++++||+.+++|+.++++|.+|..|++++++
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 206 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHK 206 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEEC
Confidence 88999999999999999999999999999999999999998655567899999999999999999999999999999999
Q ss_pred CEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC--------
Q 013929 273 GKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA-------- 344 (433)
Q Consensus 273 g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~-------- 344 (433)
++||++||.+. ....+++++||+++++|+.++++|.+|..| ++++++++||++||.
T Consensus 207 ~~iyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~--------------~~~~~~~~i~v~GG~~~~~~~~~ 270 (318)
T 2woz_A 207 GKIVIAGGVTE--DGLSASVEAFDLKTNKWEVMTEFPQERSSI--------------SLVSLAGSLYAIGGFAMIQLESK 270 (318)
T ss_dssp TEEEEEEEEET--TEEEEEEEEEETTTCCEEECCCCSSCCBSC--------------EEEEETTEEEEECCBCCBC----
T ss_pred CEEEEEcCcCC--CCccceEEEEECCCCeEEECCCCCCcccce--------------EEEEECCEEEEECCeeccCCCCc
Confidence 99999999874 346789999999999999999999999987 789999999999984
Q ss_pred ------CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 345 ------DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 345 ------~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
.+++++||+++++|+++ +|.++. +++++.++++||++..
T Consensus 271 ~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~-----~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 271 EFAPTEVNDIWKYEDDKKEWAGM--LKEIRY-----ASGASCLATRLNLFKL 315 (318)
T ss_dssp CCBCCBCCCEEEEETTTTEEEEE--ESCCGG-----GTTCEEEEEEEEGGGC
T ss_pred eeccceeeeEEEEeCCCCEehhh--cccccc-----cccceeeCCEEEEEEe
Confidence 36899999999999999 666664 3556678999998763
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.4e-37 Score=301.10 Aligned_cols=252 Identities=15% Similarity=0.110 Sum_probs=200.8
Q ss_pred eCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcC--CCceecCCCCC-CCcceeeEEEeCCEEEEEc
Q 013929 155 HLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSIL--TNSWSSGMRMN-APRCLFGSASLGEIAILAG 231 (433)
Q Consensus 155 ~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--t~~W~~~~~~p-~~r~~~~~~~~~~~iyv~G 231 (433)
.+++||.+|.. +++++++++|||+||.. .+++++||+. +++|+.++++| .+|..|++++++++|||+|
T Consensus 2 ~l~~lP~~r~~----~~~~~~~~~iyv~GG~~-----~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~G 72 (357)
T 2uvk_A 2 VLPETPVPFKS----GTGAIDNDTVYIGLGSA-----GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFG 72 (357)
T ss_dssp CSCCCSSCCCS----CEEEEETTEEEEECGGG-----TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEEC
T ss_pred CCCCCCccccc----eEEEEECCEEEEEeCcC-----CCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEc
Confidence 47888988853 44567799999999973 3479999998 49999999999 8999999999999999999
Q ss_pred cC-C---CCCCcCCceEEEeCCCCCeEEcCCCC-CCCcceeEEEECCEEEEEccccCCC---------------------
Q 013929 232 GS-D---LEGNILSSAEMYNSETQTWKVLPSMK-NPRKMCSGVFMDGKFYVIGGIGGSD--------------------- 285 (433)
Q Consensus 232 G~-~---~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~g~lyv~GG~~~~~--------------------- 285 (433)
|. + .....++++++||+.+++|+.+++++ .+|..|++++++++||++||.++..
T Consensus 73 G~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (357)
T 2uvk_A 73 GIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKI 152 (357)
T ss_dssp CEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhh
Confidence 98 2 22346889999999999999999988 8999999999999999999976321
Q ss_pred -----------CcccceEEEEECCCCceEecCCCCCCCCC-CCCCCcCCCCcCCCCEEEEECCEEEEEecC------CCe
Q 013929 286 -----------SKVLTCGEEYDLETETWTEIPNMSPARGG-AARGTEMPASAEAPPLVAVVNNELYAADYA------DME 347 (433)
Q Consensus 286 -----------~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~------~~~ 347 (433)
...++++++||+.+++|+.++++|.++.. + ++++.+++||++||. ..+
T Consensus 153 ~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~--------------~~~~~~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 153 NAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGA--------------AVVNKGDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp HHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSC--------------EEEEETTEEEEECCEEETTEECCC
T ss_pred hhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccc--------------cEEEECCEEEEEeeecCCCcccCc
Confidence 01357899999999999999988876555 5 788999999999984 468
Q ss_pred EEEEeC--CCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCC--------------CCeeEEEEeecCCCCC
Q 013929 348 VRKYDK--ERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASG--------------EGFIELNSWVPSEGPP 411 (433)
Q Consensus 348 i~~yd~--~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~--------------~~~~~~~~~~~~~~~~ 411 (433)
+++||+ ++++|++++.+|.++.. ++++++.++++|||+||..... .......++.|++.++
T Consensus 219 v~~~d~d~~~~~W~~~~~~~~~~~~---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~ 295 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPVSSPDGV---AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG 295 (357)
T ss_dssp EEEEECC---CEEEECCCSSTTTCC---BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC--
T ss_pred eEEEEecCCCCcEEecCCCCCCccc---ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC
Confidence 999986 99999999988766542 3477888999999999974321 0111223445555789
Q ss_pred CceEecccCCCcEEEEEEEec
Q 013929 412 QWNLLARKQSANFVYNCAVMG 432 (433)
Q Consensus 412 ~W~~v~~~p~~~~~~~~~v~~ 432 (433)
+|+.+++||.+|..|++++++
T Consensus 296 ~W~~~~~~p~~r~~~~~~~~~ 316 (357)
T 2uvk_A 296 KWDKSGELSQGRAYGVSLPWN 316 (357)
T ss_dssp -CEEEEECSSCCBSSEEEEET
T ss_pred ceeeCCCCCCCcccceeEEeC
Confidence 999999999999999988764
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.8e-37 Score=289.53 Aligned_cols=234 Identities=23% Similarity=0.355 Sum_probs=203.7
Q ss_pred EECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC-
Q 013929 174 AVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT- 252 (433)
Q Consensus 174 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~- 252 (433)
..++.||++||........+++++||+.+++|+.++++|.+|..|++++++++|||+||.++. ...+++++||+.+++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR-SRLSSVECLDYTADED 90 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTCCTT
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC-ccCceEEEEECCCCCC
Confidence 358899999994344456788999999999999999999999999999999999999998754 468899999999999
Q ss_pred --eEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCE
Q 013929 253 --WKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPL 330 (433)
Q Consensus 253 --W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~ 330 (433)
|+.++++|.+|..|++++++++||++||..+ ...++++++||+.+++|+.++++|.+|..| +
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~--------------~ 154 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG--SRRHTSMERYDPNIDQWSMLGDMQTAREGA--------------G 154 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCS--SCBCCEEEEEETTTTEEEEEEECSSCCBSC--------------E
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCC--CcccceEEEEcCCCCeEEECCCCCCCcccc--------------e
Confidence 9999999999999999999999999999874 345789999999999999999999999887 7
Q ss_pred EEEECCEEEEEecC-----CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEee
Q 013929 331 VAVVNNELYAADYA-----DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWV 405 (433)
Q Consensus 331 ~~~~~~~ly~~gg~-----~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~ 405 (433)
+++++++||++||. .+++++||+.+++|+.++++|.++. +++++.++++||++||..... ....+. .
T Consensus 155 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~v~--~ 226 (301)
T 2vpj_A 155 LVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS-----GAGVALLNDHIYVVGGFDGTA-HLSSVE--A 226 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCBCSSS-BCCCEE--E
T ss_pred EEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc-----cceEEEECCEEEEEeCCCCCc-ccceEE--E
Confidence 88899999999984 3789999999999999999998875 367788999999999986532 234444 4
Q ss_pred cCCCCCCceEecccCCCcEEEEEEEec
Q 013929 406 PSEGPPQWNLLARKQSANFVYNCAVMG 432 (433)
Q Consensus 406 ~~~~~~~W~~v~~~p~~~~~~~~~v~~ 432 (433)
+|..+++|+.++++|.+|..|++++++
T Consensus 227 yd~~~~~W~~~~~~p~~r~~~~~~~~~ 253 (301)
T 2vpj_A 227 YNIRTDSWTTVTSMTTPRCYVGATVLR 253 (301)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred EeCCCCcEEECCCCCCcccceeEEEEC
Confidence 455789999999999999999988764
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.9e-33 Score=294.22 Aligned_cols=246 Identities=14% Similarity=0.158 Sum_probs=202.1
Q ss_pred cCcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCC-C-----CCCccccccCCceEEEE--CCEEEEECCCCC
Q 013929 116 RSGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLP-R-----MTSNECFMCSDKESLAV--GTELLVFGRELT 187 (433)
Q Consensus 116 ~~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~-~-----~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~ 187 (433)
.++.+|++||..+ . ..+++++||+.+++|..++ + +|.+|. .++++++ +++|||+||...
T Consensus 396 ~~~~iyv~GG~~~-~--------~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~----~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 396 AGNDVFYMGGSNP-Y--------RVNEILQLSIHYDKIDMKNIEVSSSEVPVARM----CHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp CSSCEEEECCBSS-S--------BCCCEEEEEECSSCEEEEECCCCCSCCCCCCB----SCEEEEETTTTEEEEECCBSS
T ss_pred ECCEEEEECCCCC-C--------CcCcEEEEECCCCeEEEeccCCCCCCCCcccc----ceEEEEEccCCEEEEEcCCCC
Confidence 6889999999876 3 4678999999999999998 6 667774 4556888 999999999876
Q ss_pred CcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCC---CCCCC
Q 013929 188 AHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPS---MKNPR 263 (433)
Q Consensus 188 ~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~r 263 (433)
.....+++++||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|
T Consensus 463 ~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNS 538 (695)
T ss_dssp TTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSC
T ss_pred CCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcc
Confidence 555678999999999999999999999999999997 99999999987653 89999999999999986 88999
Q ss_pred cceeEEEEC---CEEEEEccccCCCCcccceEEEEECCCCc------eEecCCC-CCCCCCCCCCCcCCCCcCCCCEEEE
Q 013929 264 KMCSGVFMD---GKFYVIGGIGGSDSKVLTCGEEYDLETET------WTEIPNM-SPARGGAARGTEMPASAEAPPLVAV 333 (433)
Q Consensus 264 ~~~~~~~~~---g~lyv~GG~~~~~~~~~~~v~~yd~~t~~------W~~~~~~-p~~r~~~~~~~~~~~~~~~~~~~~~ 333 (433)
..|++++++ ++||++||........++++++||+.+++ |+.+.++ +.+|.+| ++++
T Consensus 539 ~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~--------------~~~~ 604 (695)
T 2zwa_A 539 LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS--------------QIKY 604 (695)
T ss_dssp CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC--------------EEEE
T ss_pred cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc--------------eEEE
Confidence 999988877 89999999864434678899999999999 8988775 4778886 7888
Q ss_pred EC-CEEEEEecC--------CCeEEEEeCCCCcEEEeccCCCcc---cCCCcccEEEEEeCC-EEEEEcCCCC
Q 013929 334 VN-NELYAADYA--------DMEVRKYDKERRLWFTIGRLPERA---NSMNGWGLAFRACGD-RLIVIGGPKA 393 (433)
Q Consensus 334 ~~-~~ly~~gg~--------~~~i~~yd~~~~~W~~v~~lp~~~---~~~~~~~~~~~~~~~-~l~v~GG~~~ 393 (433)
++ ++||++||. .+++++||+.+++|+.+ .+|... ......+++++.+++ +|||+||...
T Consensus 605 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 605 ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGAT 676 (695)
T ss_dssp EETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEEECC---CEEEECCEEE
T ss_pred eCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeEEEeCCCEEEEEeCCcc
Confidence 88 999999984 46899999999999965 333221 000113466666665 9999999643
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3.9e-33 Score=291.78 Aligned_cols=246 Identities=13% Similarity=0.151 Sum_probs=196.1
Q ss_pred cEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCC-C-----CCCCcceeeEEEe--
Q 013929 152 RWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGM-R-----MNAPRCLFGSASL-- 223 (433)
Q Consensus 152 ~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~-----~p~~r~~~~~~~~-- 223 (433)
+|...+..|..+. .+++++++.||++||... ...+++++||+.+++|+.++ + +|.+|..|+++++
T Consensus 378 ~~~~~~~~p~rr~-----g~~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~ 450 (695)
T 2zwa_A 378 QLLECECPINRKF-----GDVDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR 450 (695)
T ss_dssp EEEECCCTTCCBS-----CEEEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT
T ss_pred eEeccCCCCCCce-----eEEEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc
Confidence 3444454444442 234558999999999855 56788999999999999887 5 7899999999999
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCce
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETETW 302 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W 302 (433)
+++|||+||.+.....++++++||+.+++|+.++++|.+|..|+++++ +++||++||.++.. ++++||+.+++|
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-----~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-----AMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-----SEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-----CEEEEECCCCce
Confidence 999999999987655789999999999999999999999999999996 99999999987432 899999999999
Q ss_pred EecCC---CCCCCCCCCCCCcCCCCcCCCCEEEEEC---CEEEEEecC-------CCeEEEEeCCCCc------EEEecc
Q 013929 303 TEIPN---MSPARGGAARGTEMPASAEAPPLVAVVN---NELYAADYA-------DMEVRKYDKERRL------WFTIGR 363 (433)
Q Consensus 303 ~~~~~---~p~~r~~~~~~~~~~~~~~~~~~~~~~~---~~ly~~gg~-------~~~i~~yd~~~~~------W~~v~~ 363 (433)
+.+++ +|.+|.+| ++++++ ++||++||. .+++++||+.+++ |+.+..
T Consensus 526 ~~~~~~g~~p~~r~~~--------------~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVS--------------AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp EECCCSSGGGGSCCBS--------------CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred EEccCCCCCCCcccce--------------eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 99986 88899887 556666 899999985 3689999999999 999987
Q ss_pred CC-CcccCCCcccEEEEEeC-CEEEEEcCCCCCCC--CeeEEEEeecCCCCCCceEecccCC--------CcEEEEEEEe
Q 013929 364 LP-ERANSMNGWGLAFRACG-DRLIVIGGPKASGE--GFIELNSWVPSEGPPQWNLLARKQS--------ANFVYNCAVM 431 (433)
Q Consensus 364 lp-~~~~~~~~~~~~~~~~~-~~l~v~GG~~~~~~--~~~~~~~~~~~~~~~~W~~v~~~p~--------~~~~~~~~v~ 431 (433)
+| .++. +++++.++ ++|||+||...... ....+.+|++ .+++|+.+ ++|. .+..|+++++
T Consensus 592 ~p~~~R~-----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~--~t~~W~~~-~~p~~~~~~~~p~~~gh~~~~~ 663 (695)
T 2zwa_A 592 HPLFQRY-----GSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP--LSETLTSI-PISRRIWEDHSLMLAGFSLVST 663 (695)
T ss_dssp CGGGCCB-----SCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET--TTTEEEEC-CCCHHHHHHSCCCCSSCEEECC
T ss_pred CCCCCcc-----cceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC--CCCeEEEe-eccccccCCCCccceeeeEEEe
Confidence 64 4443 46777888 99999999865432 3344555555 78999965 3332 3445666554
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4e-33 Score=291.00 Aligned_cols=285 Identities=14% Similarity=0.107 Sum_probs=214.0
Q ss_pred CcceeeeccccCccccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEE
Q 013929 117 SGELYRLRRLNGVIEHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIY 196 (433)
Q Consensus 117 ~~~~~~~gg~~~~~~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 196 (433)
++++|++||.....-. -.......++.||+.+++|..++.+|.++..++. ..++..+++||++||... .+++
T Consensus 197 ~g~l~v~GG~~~~~~~--~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~-~~~~~~~g~lyv~GG~~~-----~~v~ 268 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFG--GSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP-GISMDGNGQIVVTGGNDA-----KKTS 268 (656)
T ss_dssp TTEEEEEEECCCTTTC--SCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC-EEEECTTSCEEEECSSST-----TCEE
T ss_pred CCEEEEEecccccccc--cCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc-cccCCCCCCEEEeCCCCC-----CceE
Confidence 8899999987543200 0000134688999999999999988887765542 123345899999999743 2699
Q ss_pred EEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC-----CCCCCCcceeEEE
Q 013929 197 RYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP-----SMKNPRKMCSGVF 270 (433)
Q Consensus 197 ~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-----~~p~~r~~~~~~~ 270 (433)
+||+.+++|+++++||.+|..|+++++ +++|||+||.......+.++++||+.+++|+.++ +++..|.. +++.
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~ 347 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYR 347 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceee
Confidence 999999999999999999999999999 9999999995443456889999999999999973 45555543 5556
Q ss_pred ECCEEEEEccccCCC--CcccceEEEEECCCCceEecCC-CCC------CCCCCCCCCcCCCCcCCCCEEEE---ECCEE
Q 013929 271 MDGKFYVIGGIGGSD--SKVLTCGEEYDLETETWTEIPN-MSP------ARGGAARGTEMPASAEAPPLVAV---VNNEL 338 (433)
Q Consensus 271 ~~g~lyv~GG~~~~~--~~~~~~v~~yd~~t~~W~~~~~-~p~------~r~~~~~~~~~~~~~~~~~~~~~---~~~~l 338 (433)
.++++|++||.++.. ....+.++.||+.++.|..... .+. .+..+ +++. .+++|
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~--------------~av~~~~~~~~i 413 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG--------------NAVMYDAVKGKI 413 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC--------------EEEEEETTTTEE
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC--------------ceEeccCCCCeE
Confidence 899999999987431 1235789999999999876432 111 12222 3332 48999
Q ss_pred EEEecCC--------C---eEEEEeCCCCcEEEec--cCCCcccCCCcccEEEEEe-CCEEEEEcCCCCCC-----CCee
Q 013929 339 YAADYAD--------M---EVRKYDKERRLWFTIG--RLPERANSMNGWGLAFRAC-GDRLIVIGGPKASG-----EGFI 399 (433)
Q Consensus 339 y~~gg~~--------~---~i~~yd~~~~~W~~v~--~lp~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~-----~~~~ 399 (433)
|++||.. + .+++||+.+++|.++. .||.+|.. ++++.+ +++|||+||..... ....
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~-----~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~ 488 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTF-----HTSVVLPDGSTFITGGQRRGIPFEDSTPVF 488 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBS-----CEEEECTTSCEEEECCBSBCCTTCCCSBCC
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCccc-----CCeEECCCCCEEEECCcccCcCcCCCCccc
Confidence 9999842 2 7899999999999986 88888753 455555 99999999975321 2234
Q ss_pred EEEEeecCCCCCCceEecccCCCcEEEEEEEe
Q 013929 400 ELNSWVPSEGPPQWNLLARKQSANFVYNCAVM 431 (433)
Q Consensus 400 ~~~~~~~~~~~~~W~~v~~~p~~~~~~~~~v~ 431 (433)
.+.+|++ .+++|+.++++|.+|..|+++++
T Consensus 489 ~v~~ydp--~t~~W~~~~~~~~~R~~hs~a~l 518 (656)
T 1k3i_A 489 TPEIYVP--EQDTFYKQNPNSIVRVYHSISLL 518 (656)
T ss_dssp CCEEEEG--GGTEEEECCCCSSCCCTTEEEEE
T ss_pred ceEEEcC--CCCceeecCCCCCccccccHhhc
Confidence 5566666 67999999999999999998876
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=1.7e-30 Score=271.08 Aligned_cols=263 Identities=17% Similarity=0.185 Sum_probs=194.5
Q ss_pred eEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCc-----ccceeEEEEEcCCCceecCCCCCCC
Q 013929 142 EWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAH-----HISHVIYRYSILTNSWSSGMRMNAP 214 (433)
Q Consensus 142 ~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~-----~~~~~~~~yd~~t~~W~~~~~~p~~ 214 (433)
.+.+|||.+++|..++++|.. .++++++ +++||++||..... ...+.+++||+.+++|+.++.+|.+
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~------~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~ 240 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIV------PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK 240 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSC------CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS
T ss_pred ccccCCCCCCeeeeeccCCCC------ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC
Confidence 477899999999999888762 2234545 89999999975321 2345799999999999999999888
Q ss_pred cceee--EE-EeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCEEEEEccccCCCCcccc
Q 013929 215 RCLFG--SA-SLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLT 290 (433)
Q Consensus 215 r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~ 290 (433)
|..++ ++ ..+++|||+||.+.. ++++||+.+++|+++++|+.+|..|+++++ +|+||++||... ....++
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~-~~~~~~ 314 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS-GGVFEK 314 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC-SSSCCC
T ss_pred CCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCccc-CCcccc
Confidence 87664 33 358999999997643 699999999999999999999999999999 999999999531 234678
Q ss_pred eEEEEECCCCceEecC-----CCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC---------CCeEEEEeCCCC
Q 013929 291 CGEEYDLETETWTEIP-----NMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA---------DMEVRKYDKERR 356 (433)
Q Consensus 291 ~v~~yd~~t~~W~~~~-----~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~---------~~~i~~yd~~~~ 356 (433)
++++||+.+++|+.++ +++..+.. +++..++++|++||. ...+++||++++
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~~---------------~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTADKQ---------------GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCCTT---------------GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred cceEeCCCCCcceeCCCcccccccccccc---------------ceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 8999999999999984 34444332 355678899999863 467899999999
Q ss_pred cEEEeccCCCc-c--cCCCcccEEEE--EeCCEEEEEcCCCCCC--CCee-EEEEeecCCCCCCceEec--ccCCCcEEE
Q 013929 357 LWFTIGRLPER-A--NSMNGWGLAFR--ACGDRLIVIGGPKASG--EGFI-ELNSWVPSEGPPQWNLLA--RKQSANFVY 426 (433)
Q Consensus 357 ~W~~v~~lp~~-~--~~~~~~~~~~~--~~~~~l~v~GG~~~~~--~~~~-~~~~~~~~~~~~~W~~v~--~~p~~~~~~ 426 (433)
.|......+.. + ......+.+++ ..+++||++||..... .... ...++.+++.+++|+.+. +||.+|..|
T Consensus 380 ~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~ 459 (656)
T 1k3i_A 380 GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH 459 (656)
T ss_dssp CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC
T ss_pred ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccC
Confidence 98764322211 0 00011234333 3589999999974321 1111 123445566789999997 999999999
Q ss_pred EEEEe
Q 013929 427 NCAVM 431 (433)
Q Consensus 427 ~~~v~ 431 (433)
+++++
T Consensus 460 ~~~~l 464 (656)
T 1k3i_A 460 TSVVL 464 (656)
T ss_dssp EEEEC
T ss_pred CeEEC
Confidence 98776
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.02 E-value=1e-07 Score=93.74 Aligned_cols=274 Identities=14% Similarity=0.148 Sum_probs=147.4
Q ss_pred CCCCCCCCchhHHHhhccccCcccchhhhhhcHHHHHhhcCcceeee----ccc--------------------------
Q 013929 77 LDSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYRL----RRL-------------------------- 126 (433)
Q Consensus 77 ~~~~~~~LP~dl~~~iL~rlP~~~~~~~~~V~k~w~~ll~~~~~~~~----gg~-------------------------- 126 (433)
....+..||+|++..||.+|+..++.+++.|||+|+.++.++.++.. .+.
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~ 94 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYI 94 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHH
T ss_pred cCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHh
Confidence 34567889999999999999999999999999999998876543321 000
Q ss_pred --------------------cCccc----------cEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEEC
Q 013929 127 --------------------NGVIE----------HWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVG 176 (433)
Q Consensus 127 --------------------~~~~~----------~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~ 176 (433)
.+..+ .+++.......+..||..+.+-... +.. |...-..+...
T Consensus 95 ~~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~--~~~----h~~~v~~~~~~ 168 (445)
T 2ovr_B 95 RQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT--LVG----HTGGVWSSQMR 168 (445)
T ss_dssp HHHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE--CCC----CSSCEEEEEEE
T ss_pred hhhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEE--EcC----CCCCEEEEEec
Confidence 00000 1112222334566666655443211 111 11111122333
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEc
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVL 256 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 256 (433)
+.+++.|+. ...+.+||..+++-... +........+...++..++.|+.+ ..+.+||..+.+-...
T Consensus 169 ~~~l~s~~~------dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~ 234 (445)
T 2ovr_B 169 DNIIISGST------DRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD------ATLRVWDIETGQCLHV 234 (445)
T ss_dssp TTEEEEEET------TSCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEESSSCCEEEE
T ss_pred CCEEEEEeC------CCeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC------CEEEEEECCCCcEEEE
Confidence 445555543 23588889887754221 111111122233344445666543 4588899887653221
Q ss_pred CCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECC
Q 013929 257 PSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNN 336 (433)
Q Consensus 257 ~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~ 336 (433)
+.........+..++..++.|+.++ .+.+||+.+.+-... +...... -..+..++
T Consensus 235 --~~~~~~~v~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~--~~~~~~~--------------v~~~~~~~ 289 (445)
T 2ovr_B 235 --LMGHVAAVRCVQYDGRRVVSGAYDF-------MVKVWDPETETCLHT--LQGHTNR--------------VYSLQFDG 289 (445)
T ss_dssp --EECCSSCEEEEEECSSCEEEEETTS-------CEEEEEGGGTEEEEE--ECCCSSC--------------EEEEEECS
T ss_pred --EcCCcccEEEEEECCCEEEEEcCCC-------EEEEEECCCCcEeEE--ecCCCCc--------------eEEEEECC
Confidence 1111222234445888888877653 468888877643221 1111111 12344588
Q ss_pred EEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 337 ELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 337 ~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
..++.|+..+.|..||..+++-... +..... . ......++.+++.|+.++ .+.+|++..
T Consensus 290 ~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~----~-v~~~~~~~~~l~~~~~dg------~i~vwd~~~ 348 (445)
T 2ovr_B 290 IHVVSGSLDTSIRVWDVETGNCIHT--LTGHQS----L-TSGMELKDNILVSGNADS------TVKIWDIKT 348 (445)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEE--ECCCCS----C-EEEEEEETTEEEEEETTS------CEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEE--EcCCcc----c-EEEEEEeCCEEEEEeCCC------eEEEEECCC
Confidence 8888888889999999988753322 221111 1 223334556666666532 366777743
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.87 E-value=1.5e-07 Score=92.35 Aligned_cols=273 Identities=11% Similarity=0.083 Sum_probs=148.7
Q ss_pred CCCCCCCchh----HHHhhccccCcccchhhhhhcHHHHHhhcCcceeeec------------c----------------
Q 013929 78 DSLIQPIGRD----NSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYRLR------------R---------------- 125 (433)
Q Consensus 78 ~~~~~~LP~d----l~~~iL~rlP~~~~~~~~~V~k~w~~ll~~~~~~~~g------------g---------------- 125 (433)
.-++..||+| |+..||++|+..++.+++.|||+|+.++.++.++..- +
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 87 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 87 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC----
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCC
Confidence 3455679999 9999999999999999999999999887765543210 0
Q ss_pred --------------------------------c---------cCc---------cccEEEEeeccceEEEEecCCCcEEe
Q 013929 126 --------------------------------L---------NGV---------IEHWVYFSCHLLEWEAFDPIRRRWMH 155 (433)
Q Consensus 126 --------------------------------~---------~~~---------~~~~l~~~~~~~~~~~yd~~~~~W~~ 155 (433)
. .+. ...++........+.+||..+.+-..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~ 167 (435)
T 1p22_A 88 PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR 167 (435)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEE
T ss_pred CCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEE
Confidence 0 000 00112222233456666766544322
Q ss_pred CCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCC
Q 013929 156 LPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDL 235 (433)
Q Consensus 156 l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 235 (433)
.- . .|...-..+..++.+++.|+. ...+.+||..+++-... +............++..++.|+.+
T Consensus 168 ~~--~----~h~~~v~~l~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d- 232 (435)
T 1p22_A 168 IL--T----GHTGSVLCLQYDERVIITGSS------DSTVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD- 232 (435)
T ss_dssp EE--C----CCSSCEEEEECCSSEEEEEET------TSCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT-
T ss_pred EE--c----CCCCcEEEEEECCCEEEEEcC------CCeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC-
Confidence 11 1 011111223346666666654 23588899888764321 111112223333455566666654
Q ss_pred CCCcCCceEEEeCCCCCeEEc-CCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCC
Q 013929 236 EGNILSSAEMYNSETQTWKVL-PSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGG 314 (433)
Q Consensus 236 ~~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~ 314 (433)
..+.+||..+..-... ..+........++..++..++.|+.+ ..+.+||+.+.+-... +......
T Consensus 233 -----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~~~~~--~~~~~~~ 298 (435)
T 1p22_A 233 -----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-------RTIKVWNTSTCEFVRT--LNGHKRG 298 (435)
T ss_dssp -----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSC
T ss_pred -----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-------CeEEEEECCcCcEEEE--EcCCCCc
Confidence 3478888877542110 11111122223344467777777655 2478899987653221 1111111
Q ss_pred CCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCC
Q 013929 315 AARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKAS 394 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 394 (433)
...+..++.+++.|+..+.|..||..+++-. ..+..... ....+..++..++.|+.++
T Consensus 299 --------------v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~h~~-----~v~~~~~~~~~l~sg~~dg- 356 (435)
T 1p22_A 299 --------------IACLQYRDRLVVSGSSDNTIRLWDIECGACL--RVLEGHEE-----LVRCIRFDNKRIVSGAYDG- 356 (435)
T ss_dssp --------------EEEEEEETTEEEEEETTSCEEEEETTTCCEE--EEECCCSS-----CEEEEECCSSEEEEEETTS-
T ss_pred --------------EEEEEeCCCEEEEEeCCCeEEEEECCCCCEE--EEEeCCcC-----cEEEEEecCCEEEEEeCCC-
Confidence 1234456777888888899999999876532 22222111 1333445778888887643
Q ss_pred CCCeeEEEEeec
Q 013929 395 GEGFIELNSWVP 406 (433)
Q Consensus 395 ~~~~~~~~~~~~ 406 (433)
.+.+|++
T Consensus 357 -----~i~vwd~ 363 (435)
T 1p22_A 357 -----KIKVWDL 363 (435)
T ss_dssp -----CEEEEEH
T ss_pred -----cEEEEEC
Confidence 2666765
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.83 E-value=9.5e-07 Score=87.11 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=37.1
Q ss_pred CCCCCCCCchhHHHhhccccCcccchhhhhhcHHHHHhhcC
Q 013929 77 LDSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRS 117 (433)
Q Consensus 77 ~~~~~~~LP~dl~~~iL~rlP~~~~~~~~~V~k~w~~ll~~ 117 (433)
..-.+..||+|++..||+.||..++.+++.|||+|+.++.+
T Consensus 11 ~~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 11 KRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp CCCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred ccCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 33456789999999999999999999999999999999887
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.59 E-value=2.6e-08 Score=66.90 Aligned_cols=45 Identities=4% Similarity=0.079 Sum_probs=39.2
Q ss_pred CCCCCCCchhHHHhhccccCcccchhhhhhcHHHHHhhcCcceee
Q 013929 78 DSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYR 122 (433)
Q Consensus 78 ~~~~~~LP~dl~~~iL~rlP~~~~~~~~~V~k~w~~ll~~~~~~~ 122 (433)
...|..||+|++..||.+||..++.+++.|||+|+.++.++.++.
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 456789999999999999999999999999999999999888763
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.41 E-value=0.00015 Score=68.23 Aligned_cols=210 Identities=12% Similarity=-0.091 Sum_probs=121.2
Q ss_pred cceEEEEecCCCcEEeCCCCC-CccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCce-ecCCCCCCCcce
Q 013929 140 LLEWEAFDPIRRRWMHLPRMT-SNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSW-SSGMRMNAPRCL 217 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~p~~r~~ 217 (433)
...+..||+.+.+...--... ..+........++..++++|+... ..+.+.++|+.|++- .+++.... .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~------~~~~v~viD~~t~~~~~~i~~~~~---p 86 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN------NSHVIFAIDINTFKEVGRITGFTS---P 86 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG------GGTEEEEEETTTCCEEEEEECCSS---E
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc------CCCEEEEEECcccEEEEEcCCCCC---C
Confidence 457888999998875421000 000000012335567899999864 235699999998876 34443322 2
Q ss_pred eeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCC----CcceeEEEECCEEEEEccccCCCCcccceE
Q 013929 218 FGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNP----RKMCSGVFMDGKFYVIGGIGGSDSKVLTCG 292 (433)
Q Consensus 218 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~----r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v 292 (433)
..++. .++++||.... ...+.++|+.+++-...-+.... .....++..++++|+..-. ..+.+
T Consensus 87 ~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~------~~~~v 154 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS------YQNRI 154 (328)
T ss_dssp EEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT------TCCEE
T ss_pred cEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC------CCCEE
Confidence 33444 67899998542 36799999998864321111110 0223455588999998420 12468
Q ss_pred EEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC----------CCeEEEEeCCCCcEEEec
Q 013929 293 EEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA----------DMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 293 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~----------~~~i~~yd~~~~~W~~v~ 362 (433)
.++|+++++....-........ ..+.-+|++|+.... .+.|.++|+++++....-
T Consensus 155 ~viD~~t~~~~~~i~~g~~p~~---------------i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 155 LKIDTETDKVVDELTIGIQPTS---------------LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp EEEETTTTEEEEEEECSSCBCC---------------CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEEEcCCCccc---------------eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 9999999875432111111111 133346898887632 268999999998866443
Q ss_pred cCCCcccCCCcccEEEEEe--CCEEEEEcC
Q 013929 363 RLPERANSMNGWGLAFRAC--GDRLIVIGG 390 (433)
Q Consensus 363 ~lp~~~~~~~~~~~~~~~~--~~~l~v~GG 390 (433)
.++..... ..++.. ++.||+..+
T Consensus 220 ~~~~g~~p-----~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 220 KFKLGDWP-----SEVQLNGTRDTLYWINN 244 (328)
T ss_dssp ECCTTCCC-----EEEEECTTSCEEEEESS
T ss_pred ecCCCCCc-----eeEEEecCCCEEEEEcc
Confidence 44432110 334443 678888764
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.34 E-value=4.4e-05 Score=68.06 Aligned_cols=188 Identities=18% Similarity=0.124 Sum_probs=121.5
Q ss_pred ceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCC
Q 013929 170 KESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSE 249 (433)
Q Consensus 170 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 249 (433)
.++...++.+|+..|.. ..+.+.++|+.+++=..--+++..-.+.+++..+++||+.... .+.+++||+.
T Consensus 24 qGL~~~~~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------~~~v~v~D~~ 93 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------NHEGFVYDLA 93 (243)
T ss_dssp EEEEEETTEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEETT
T ss_pred ccEEEECCEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------CCEEEEEECC
Confidence 35566789999998863 2346899999999876555566666677888899999998532 4679999998
Q ss_pred CCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEe-cC--CCCCCCCCCCCCCcCCCCcC
Q 013929 250 TQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IP--NMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 250 t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~--~~p~~r~~~~~~~~~~~~~~ 326 (433)
+.+- +..++.+..+.+++.-++++|+.-| .+.+..+|+++.+-.. +. ..+.+....
T Consensus 94 tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg--------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~l----------- 152 (243)
T 3mbr_X 94 TLTP--RARFRYPGEGWALTSDDSHLYMSDG--------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNL----------- 152 (243)
T ss_dssp TTEE--EEEEECSSCCCEEEECSSCEEEECS--------SSEEEEECTTTCCEEEEEECEETTEECCCE-----------
T ss_pred cCcE--EEEEeCCCCceEEeeCCCEEEEECC--------CCeEEEEeCCCCeEEEEEEEccCCcccccc-----------
Confidence 8653 3333333455666666778888744 2468999999876432 21 111111110
Q ss_pred CCCEEEEECCEEEEEecCCCeEEEEeCCCCc---EEEeccCCCcc------cCCCcccEEEEEeCCEEEEEcC
Q 013929 327 APPLVAVVNNELYAADYADMEVRKYDKERRL---WFTIGRLPERA------NSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 327 ~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~---W~~v~~lp~~~------~~~~~~~~~~~~~~~~l~v~GG 390 (433)
..+...+|+||+--...+.|.+-|+++++ |..++.+.... ...---|.|...-+++|||.|-
T Consensus 153 --NeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 153 --NELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp --EEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred --eeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 13445699999877678899999999986 44444442211 0000123444444789999994
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.11 E-value=0.00014 Score=65.49 Aligned_cols=187 Identities=12% Similarity=-0.026 Sum_probs=116.2
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++...++.+|+..|.. ..+.+.++|+.|++-..--+++..-.+.+++..+++||+... ..+.+++||+.+
T Consensus 47 GL~~~~~~LyestG~~----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw------~~~~v~v~D~~t 116 (262)
T 3nol_A 47 GFFYRNGYFYESTGLN----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW------KNGLGFVWNIRN 116 (262)
T ss_dssp EEEEETTEEEEEEEET----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------SSSEEEEEETTT
T ss_pred eEEEECCEEEEECCCC----CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe------eCCEEEEEECcc
Confidence 4455588999988752 234689999999986543345544456678888999999943 236799999998
Q ss_pred CCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEe-cCCC--CCCCCCCCCCCcCCCCcCC
Q 013929 251 QTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPNM--SPARGGAARGTEMPASAEA 327 (433)
Q Consensus 251 ~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~--p~~r~~~~~~~~~~~~~~~ 327 (433)
.+-. ..++.+..+.+.+.-++++|+.-| .+.++.+|+++.+-.. ++.- ..+....
T Consensus 117 ~~~~--~ti~~~~eG~glt~dg~~L~~SdG--------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~l------------ 174 (262)
T 3nol_A 117 LRQV--RSFNYDGEGWGLTHNDQYLIMSDG--------TPVLRFLDPESLTPVRTITVTAHGEELPEL------------ 174 (262)
T ss_dssp CCEE--EEEECSSCCCCEEECSSCEEECCS--------SSEEEEECTTTCSEEEEEECEETTEECCCE------------
T ss_pred CcEE--EEEECCCCceEEecCCCEEEEECC--------CCeEEEEcCCCCeEEEEEEeccCCcccccc------------
Confidence 7642 222333345566666667887643 2468999999876432 2211 1111110
Q ss_pred CCEEEEECCEEEEEecCCCeEEEEeCCCCcEE---EeccCCCcc-----cCCCcccEEEEEeCCEEEEEcC
Q 013929 328 PPLVAVVNNELYAADYADMEVRKYDKERRLWF---TIGRLPERA-----NSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 328 ~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~---~v~~lp~~~-----~~~~~~~~~~~~~~~~l~v~GG 390 (433)
..+...+|+||+--...+.|.+-|+++++-. .++.+.... ...--.|.|...-+++|||.|-
T Consensus 175 -NELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 175 -NELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp -EEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred -ceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 0244569999987777889999999998744 443332111 0000123444445689999984
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.11 E-value=0.0037 Score=59.41 Aligned_cols=234 Identities=13% Similarity=0.124 Sum_probs=126.4
Q ss_pred EEEeeccceEEEEecCCC--cEEeCCCCCCcc---ccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--ee
Q 013929 134 VYFSCHLLEWEAFDPIRR--RWMHLPRMTSNE---CFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS--WS 206 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~--~W~~l~~~p~~~---~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~ 206 (433)
+|+......+.+||+.+. .|..-....... .........+..++.||+... ...++.+|+.+++ |+
T Consensus 56 v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 56 VYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------KAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------TSEEEEEETTTCCEEEE
T ss_pred EEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------CCEEEEEECCCCCEEEE
Confidence 344434456888998764 465433211100 000011234556888988643 2368999999885 75
Q ss_pred cCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCC--CCcceeEEEECCEEEEEcccc
Q 013929 207 SGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKN--PRKMCSGVFMDGKFYVIGGIG 282 (433)
Q Consensus 207 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~g~lyv~GG~~ 282 (433)
.-..-. .....+..++.||+... ...++.||+.+++ |+.-...+. .+.....++.++.+|+. ..+
T Consensus 129 ~~~~~~---~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~ 197 (376)
T 3q7m_A 129 TKVAGE---ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDN 197 (376)
T ss_dssp EECSSC---CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTT
T ss_pred EeCCCc---eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCC
Confidence 422111 12233456888887532 2468999998876 876443221 12223445668887773 222
Q ss_pred CCCCcccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCC--cE
Q 013929 283 GSDSKVLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERR--LW 358 (433)
Q Consensus 283 ~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~--~W 358 (433)
..+..||+.+++ |+.-...+......... .......++.++.+|+.+ ..+.+..+|++++ .|
T Consensus 198 -------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~v~~~~-~~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 198 -------GRVSAVLMEQGQMIWQQRISQATGSTEIDRL------SDVDTTPVVVNGVVFALA-YNGNLTALDLRSGQIMW 263 (376)
T ss_dssp -------TEEEEEETTTCCEEEEEECCC-----------------CCCCCCEEETTEEEEEC-TTSCEEEEETTTCCEEE
T ss_pred -------CEEEEEECCCCcEEEEEecccCCCCcccccc------cccCCCcEEECCEEEEEe-cCcEEEEEECCCCcEEe
Confidence 257889998764 76543322211000000 000013456788888865 4668999999877 47
Q ss_pred EEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEe
Q 013929 359 FTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLL 416 (433)
Q Consensus 359 ~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v 416 (433)
+.- .+. ....+..+++||+.... ..+..++....+..|+.-
T Consensus 264 ~~~--~~~--------~~~~~~~~~~l~~~~~~-------g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 264 KRE--LGS--------VNDFIVDGNRIYLVDQN-------DRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp EEC--CCC--------EEEEEEETTEEEEEETT-------CCEEEEETTTCCEEEEEC
T ss_pred ecc--CCC--------CCCceEECCEEEEEcCC-------CeEEEEECCCCcEEEeec
Confidence 643 111 13355678899987642 125566665556667653
No 27
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.08 E-value=9e-07 Score=81.06 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=42.4
Q ss_pred CCCCCCCCchhHHHhhccccCcccch-hhhhhcHHHHHhhcCcceeee
Q 013929 77 LDSLIQPIGRDNSISCLIRCSRSDYG-SIASLNQSFRSLIRSGELYRL 123 (433)
Q Consensus 77 ~~~~~~~LP~dl~~~iL~rlP~~~~~-~~~~V~k~w~~ll~~~~~~~~ 123 (433)
....+..||+||+.+||++||..++. ++++|||+|+.++.++.|+..
T Consensus 47 ~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~ 94 (297)
T 2e31_A 47 AVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLL 94 (297)
T ss_dssp CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHH
T ss_pred cccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHH
Confidence 34567899999999999999999999 999999999999999887644
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.07 E-value=0.0027 Score=59.41 Aligned_cols=167 Identities=10% Similarity=-0.069 Sum_probs=102.1
Q ss_pred ceeEEEEEcCCCceecC-----CCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCe-EEcCCCCCCCcc
Q 013929 192 SHVIYRYSILTNSWSSG-----MRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTW-KVLPSMKNPRKM 265 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~-----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~p~~r~~ 265 (433)
...+.+||+.|+++..- ...+.......++..++++|+... ....+.++|+.+.+- ..++.. ...
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~------~~~~v~viD~~t~~~~~~i~~~---~~p 86 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN------NSHVIFAIDINTFKEVGRITGF---TSP 86 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG------GGTEEEEEETTTCCEEEEEECC---SSE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc------CCCEEEEEECcccEEEEEcCCC---CCC
Confidence 45689999999987532 112333344566778999999964 235799999998875 334322 223
Q ss_pred eeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEec-
Q 013929 266 CSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADY- 343 (433)
Q Consensus 266 ~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg- 343 (433)
...+. -++++|+....+ ..+.++|+.+++-...-+....... ...+..++..++++|+...
T Consensus 87 ~~i~~~~~g~lyv~~~~~-------~~v~~iD~~t~~~~~~i~~g~~~~~----------~~~p~~i~~~~~~lyv~~~~ 149 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIWD-------YRIFIINPKTYEITGYIECPDMDME----------SGSTEQMVQYGKYVYVNCWS 149 (328)
T ss_dssp EEEEEEETTEEEEEEBSC-------SEEEEEETTTTEEEEEEECTTCCTT----------TCBCCCEEEETTEEEEEECT
T ss_pred cEEEEeCCCeEEEEECCC-------CeEEEEECCCCeEEEEEEcCCcccc----------CCCcceEEEECCEEEEEcCC
Confidence 34444 688999986432 4689999999875422111110000 0001135558999999975
Q ss_pred CCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 344 ADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 344 ~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
..+.|.++|+++++....-.....+. +. ...-+|++|+...
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~~p~-----~i-~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGIQPT-----SL-VMDKYNKMWTITD 190 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSSCBC-----CC-EECTTSEEEEEBC
T ss_pred CCCEEEEEECCCCeEEEEEEcCCCcc-----ce-EEcCCCCEEEEEC
Confidence 47899999999987654333322221 12 2234688888764
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.02 E-value=0.0029 Score=60.17 Aligned_cols=204 Identities=9% Similarity=0.054 Sum_probs=116.6
Q ss_pred EEEEeeccceEEEEecCCCc--EEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--eecC
Q 013929 133 WVYFSCHLLEWEAFDPIRRR--WMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS--WSSG 208 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~--W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 208 (433)
.+|+.+....+++||+.+.+ |..-...+..... .....+..++.||+... ...++.||+.+++ |+.-
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~~~~~~v~~g~~-------~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR--GESAPTTAFGAAVVGGD-------NGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----C--CCCCCEEETTEEEECCT-------TTEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec--CCCCcEEECCEEEEEcC-------CCEEEEEECCCCcEEEEEe
Confidence 35555555678999987765 7654332211000 01223455777776421 2358999998875 7643
Q ss_pred CCCCCCc--------ceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCCCCcceeEEEECCEEEEE
Q 013929 209 MRMNAPR--------CLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKNPRKMCSGVFMDGKFYVI 278 (433)
Q Consensus 209 ~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~g~lyv~ 278 (433)
...+... .....+..++.||+.+. ...+..+|+.+++ |+.-.. .....++.++.+|+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-------~g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~ 283 (376)
T 3q7m_A 216 ISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-------NGNLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLV 283 (376)
T ss_dssp CCC-----------CCCCCCEEETTEEEEECT-------TSCEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEE
T ss_pred cccCCCCcccccccccCCCcEEECCEEEEEec-------CcEEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEE
Confidence 2222111 22334556888888641 2468999998774 765321 123456678999987
Q ss_pred ccccCCCCcccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCC
Q 013929 279 GGIGGSDSKVLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 279 GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
... ..+..||+.+++ |+.-. +...... ..++.++.||+.. ..+.+++||+.++
T Consensus 284 ~~~--------g~l~~~d~~tG~~~w~~~~-~~~~~~~---------------~~~~~~~~l~v~~-~~g~l~~~d~~tG 338 (376)
T 3q7m_A 284 DQN--------DRVMALTIDGGVTLWTQSD-LLHRLLT---------------SPVLYNGNLVVGD-SEGYLHWINVEDG 338 (376)
T ss_dssp ETT--------CCEEEEETTTCCEEEEECT-TTTSCCC---------------CCEEETTEEEEEC-TTSEEEEEETTTC
T ss_pred cCC--------CeEEEEECCCCcEEEeecc-cCCCccc---------------CCEEECCEEEEEe-CCCeEEEEECCCC
Confidence 432 247889998876 76531 2211111 3556789988764 4568999999988
Q ss_pred c--EEEeccCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 357 L--WFTIGRLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 357 ~--W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
+ |+.- ++.... ....+..+++||+..
T Consensus 339 ~~~~~~~--~~~~~~-----~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 339 RFVAQQK--VDSSGF-----QTEPVAADGKLLIQA 366 (376)
T ss_dssp CEEEEEE--CCTTCB-----CSCCEEETTEEEEEB
T ss_pred cEEEEEe--cCCCcc-----eeCCEEECCEEEEEe
Confidence 6 5432 211111 122345688988865
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.99 E-value=0.00019 Score=64.65 Aligned_cols=184 Identities=11% Similarity=-0.025 Sum_probs=115.1
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++...++.+|+..|.. ..+.++|+.|++-..-- ++..-.+.+++..+++||+.... .+.+++||+.+
T Consensus 59 GL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V~D~~T 125 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT------EGLLFTWSGMP 125 (268)
T ss_dssp EEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS------SCEEEEEETTT
T ss_pred eEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc------CCEEEEEECCc
Confidence 4555689999998862 23899999999754322 55544556788889999998432 36799999998
Q ss_pred CCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEe-cCC--CCCCCCCCCCCCcCCCCcCC
Q 013929 251 QTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPN--MSPARGGAARGTEMPASAEA 327 (433)
Q Consensus 251 ~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~--~p~~r~~~~~~~~~~~~~~~ 327 (433)
.+-. ..++.+..+.+.+.-++++|+.-| .+.+..+|+++.+-.. +.. -+.+....
T Consensus 126 l~~~--~ti~~~~eGwGLt~Dg~~L~vSdG--------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~l------------ 183 (268)
T 3nok_A 126 PQRE--RTTRYSGEGWGLCYWNGKLVRSDG--------GTMLTFHEPDGFALVGAVQVKLRGQPVELI------------ 183 (268)
T ss_dssp TEEE--EEEECSSCCCCEEEETTEEEEECS--------SSEEEEECTTTCCEEEEEECEETTEECCCE------------
T ss_pred CcEE--EEEeCCCceeEEecCCCEEEEECC--------CCEEEEEcCCCCeEEEEEEeCCCCcccccc------------
Confidence 6532 222333445677777888999854 2468899999876432 211 11111110
Q ss_pred CCEEEEECCEEEEEecCCCeEEEEeCCCCc---EEEeccCCC------cccCCCcccEEEEEeCCEEEEEcC
Q 013929 328 PPLVAVVNNELYAADYADMEVRKYDKERRL---WFTIGRLPE------RANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 328 ~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~---W~~v~~lp~------~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
..+...+|+||+--...+.|.+.|+++++ |..++.+.. .....---|.|...-+++|||.|-
T Consensus 184 -NeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 184 -NELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp -EEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred -cccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 12445699999776678899999999986 444443311 000000012443334679999884
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.78 E-value=0.00099 Score=60.36 Aligned_cols=188 Identities=12% Similarity=0.038 Sum_probs=111.0
Q ss_pred EEEEC-CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 172 SLAVG-TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 172 ~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++..+ +.+|+..|.. ..+.+.++|+.|++=...-+++.......++..+++||+..- ..+.+.+||+.+
T Consensus 26 l~~~~dg~Lyvstg~~----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD~~t 95 (266)
T 2iwa_A 26 LVYAENDTLFESTGLY----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW------LKNIGFIYDRRT 95 (266)
T ss_dssp EEECSTTEEEEEECST----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET------TCSEEEEEETTT
T ss_pred EEEeCCCeEEEECCCC----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe------cCCEEEEEECCC
Confidence 34444 7999986631 345799999999986543334433445677778999999943 246799999997
Q ss_pred CCeEEcCCCCCC-CcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceE-ecCC--CCCCCCCCCCCCcCCCCcC
Q 013929 251 QTWKVLPSMKNP-RKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWT-EIPN--MSPARGGAARGTEMPASAE 326 (433)
Q Consensus 251 ~~W~~~~~~p~~-r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~-~~~~--~p~~r~~~~~~~~~~~~~~ 326 (433)
.+ .+..++.+ ..+.+.+.-++++|+.-| .+.+.++|+++.+-. .++. .+.+...
T Consensus 96 ~~--v~~~i~~g~~~g~glt~Dg~~l~vs~g--------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~------------ 153 (266)
T 2iwa_A 96 LS--NIKNFTHQMKDGWGLATDGKILYGSDG--------TSILYEIDPHTFKLIKKHNVKYNGHRVIR------------ 153 (266)
T ss_dssp TE--EEEEEECCSSSCCEEEECSSSEEEECS--------SSEEEEECTTTCCEEEEEECEETTEECCC------------
T ss_pred Cc--EEEEEECCCCCeEEEEECCCEEEEECC--------CCeEEEEECCCCcEEEEEEECCCCccccc------------
Confidence 64 22223222 233444454567887643 246899999886532 2221 1111111
Q ss_pred CCCEEEEECCEEEEEecCCCeEEEEeCCCCc---EEEeccCCCc------ccCCCcccEEEEEeCCEEEEEcCCC
Q 013929 327 APPLVAVVNNELYAADYADMEVRKYDKERRL---WFTIGRLPER------ANSMNGWGLAFRACGDRLIVIGGPK 392 (433)
Q Consensus 327 ~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~---W~~v~~lp~~------~~~~~~~~~~~~~~~~~l~v~GG~~ 392 (433)
+..+...++++|+--...+.|.+-|+++++ |..++.+... .....-.|.++..-++++||.|+..
T Consensus 154 -~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 154 -LNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred -ceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 013444589999877678899999999986 3333322100 0000012344433467999999763
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.73 E-value=0.0011 Score=58.99 Aligned_cols=140 Identities=17% Similarity=0.047 Sum_probs=92.7
Q ss_pred eeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEEC
Q 013929 218 FGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 218 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
.++...++.+|+-.|..+. +.+.++|+.+++=..--+++....+.+.+..+++||+....+ +.+++||+
T Consensus 24 qGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-------~~v~v~D~ 92 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-------HEGFVYDL 92 (243)
T ss_dssp EEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------SEEEEEET
T ss_pred ccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-------CEEEEEEC
Confidence 4777788999999886543 678999999997655445555555667788999999995433 56899999
Q ss_pred CCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEE-ec--cCCCcccCCCcc
Q 013929 298 ETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFT-IG--RLPERANSMNGW 374 (433)
Q Consensus 298 ~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~-v~--~lp~~~~~~~~~ 374 (433)
++.+-.. .++.+..+. +++..+++||+..| .+.++.+|+++.+-.. +. .-+.+....
T Consensus 93 ~tl~~~~--ti~~~~~Gw--------------glt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~l--- 152 (243)
T 3mbr_X 93 ATLTPRA--RFRYPGEGW--------------ALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNL--- 152 (243)
T ss_dssp TTTEEEE--EEECSSCCC--------------EEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCE---
T ss_pred CcCcEEE--EEeCCCCce--------------EEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccc---
Confidence 8865332 222222333 56666778999887 7889999999976432 22 212221111
Q ss_pred cEEEEEeCCEEEEEc
Q 013929 375 GLAFRACGDRLIVIG 389 (433)
Q Consensus 375 ~~~~~~~~~~l~v~G 389 (433)
..+...+|+||+--
T Consensus 153 -NeLe~~~G~lyanv 166 (243)
T 3mbr_X 153 -NELEWVNGELLANV 166 (243)
T ss_dssp -EEEEEETTEEEEEE
T ss_pred -eeeEEeCCEEEEEE
Confidence 23445588888543
No 33
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.69 E-value=0.034 Score=51.59 Aligned_cols=217 Identities=8% Similarity=-0.037 Sum_probs=110.5
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEE-E-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC----
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-V-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA---- 213 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---- 213 (433)
...++.+|+.+.+-...-+..... ..++. . ++.+|+.+.. .+.+++||+.+++-...-+.+.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~ 135 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKP------FGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKGRLVLDDRKRT 135 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC------CSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEEEEESCCCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCCc------ceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEEEEecCCCccc
Confidence 357889999887653322211111 11222 2 3468877653 2368999999887432111111
Q ss_pred ----CcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-EC-CEEEEEccccCCC
Q 013929 214 ----PRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MD-GKFYVIGGIGGSD 285 (433)
Q Consensus 214 ----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~-g~lyv~GG~~~~~ 285 (433)
+.....++.. ++++|+.+... -..+++||+.+.+-...-+. ........+. -+ ..+|+... +
T Consensus 136 ~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-~--- 205 (353)
T 3vgz_A 136 EEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA-D--- 205 (353)
T ss_dssp SSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT-T---
T ss_pred cccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC-C---
Confidence 1112233332 45688775321 24589999987754322111 1111222233 24 45666532 2
Q ss_pred CcccceEEEEECCCCceEecCCCCCC-CCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEec
Q 013929 286 SKVLTCGEEYDLETETWTEIPNMSPA-RGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 286 ~~~~~~v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~ 362 (433)
..+.+||+.+.+-......... .... ...++.. ++.+|+.....+.+.+||+.+++....-
T Consensus 206 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~------------~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 206 ----GELITIDTADNKILSRKKLLDDGKEHF------------FINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp ----SEEEEEETTTTEEEEEEECCCSSSCCC------------EEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred ----CeEEEEECCCCeEEEEEEcCCCCCCcc------------cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 3578899988764322111111 1110 0123333 4568887766789999999988765544
Q ss_pred cCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 363 RLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 363 ~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
..+.+. +.++..-++.+|+.+... ..+.+|+.
T Consensus 270 ~~~~~~------~~~~s~dg~~l~v~~~~~------~~v~~~d~ 301 (353)
T 3vgz_A 270 AAPESL------AVLFNPARNEAYVTHRQA------GKVSVIDA 301 (353)
T ss_dssp ECSSCC------CEEEETTTTEEEEEETTT------TEEEEEET
T ss_pred EcCCCc------eEEECCCCCEEEEEECCC------CeEEEEEC
Confidence 444332 233333345688776432 23556665
No 34
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.54 E-value=0.0048 Score=57.10 Aligned_cols=248 Identities=8% Similarity=-0.005 Sum_probs=119.3
Q ss_pred ceEEEEecC--CCcEEeCCCCCCccccccCCceEEE-EC-CEEEEECCCCCCcccceeEEEEEcCCCc-eecCCCCCCCc
Q 013929 141 LEWEAFDPI--RRRWMHLPRMTSNECFMCSDKESLA-VG-TELLVFGRELTAHHISHVIYRYSILTNS-WSSGMRMNAPR 215 (433)
Q Consensus 141 ~~~~~yd~~--~~~W~~l~~~p~~~~~~~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r 215 (433)
..+..||.. +.++..+..++.... ...++. .+ ..+|+.+.. ...+.+||...+. ...+...+...
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~ 129 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGS----LTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVEGLD 129 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSC----CSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEECCCT
T ss_pred CeEEEEEecCCCCceeeccccccCCC----CcEEEEcCCCCEEEEEecC------CCeEEEEECCCCccccccccccCCC
Confidence 456666665 667765533322110 111222 23 356666532 2357888873221 11111111111
Q ss_pred ceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCC-CCeEEcC----CCCCCCcceeEEE-ECC-EEEEEccccCCCC
Q 013929 216 CLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSET-QTWKVLP----SMKNPRKMCSGVF-MDG-KFYVIGGIGGSDS 286 (433)
Q Consensus 216 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~----~~p~~r~~~~~~~-~~g-~lyv~GG~~~~~~ 286 (433)
..+.++.. +..||+.+.. -..+.+||..+ ++...+. ..+.......++. -++ .+|+.+..+
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~---- 199 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALK------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN---- 199 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT----
T ss_pred CceEEEECCCCCEEEEecCC------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC----
Confidence 12223332 3467776522 24588999887 6665322 1111111112222 244 466665332
Q ss_pred cccceEEEEECC--CCceEec---CCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCC--CCc
Q 013929 287 KVLTCGEEYDLE--TETWTEI---PNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKE--RRL 357 (433)
Q Consensus 287 ~~~~~v~~yd~~--t~~W~~~---~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~--~~~ 357 (433)
..+.+||+. ++.+..+ ..++...... .....++.. +..||+.+...+.+.+||.. +++
T Consensus 200 ---~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~ 266 (343)
T 1ri6_A 200 ---SSVDVWELKDPHGNIECVQTLDMMPENFSDT----------RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV 266 (343)
T ss_dssp ---TEEEEEESSCTTSCCEEEEEEECSCTTCCSC----------CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC
T ss_pred ---CEEEEEEecCCCCcEEEEeeccccCcccccc----------CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc
Confidence 357788884 4554332 2233221110 000012222 34677777667889999988 667
Q ss_pred EEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccCCCcEEEEEEE
Q 013929 358 WFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQSANFVYNCAV 430 (433)
Q Consensus 358 W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p~~~~~~~~~v 430 (433)
++.+..++.... . .+.++..-+..||+.++.. ..+.+|.++..+.+++.+..++.+....+.++
T Consensus 267 ~~~~~~~~~~~~-~--~~~~~s~dg~~l~~~~~~~------~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~ 330 (343)
T 1ri6_A 267 LSKEGFQPTETQ-P--RGFNVDHSGKYLIAAGQKS------HHISVYEIVGEQGLLHEKGRYAVGQGPMWVVV 330 (343)
T ss_dssp EEEEEEEECSSS-C--CCEEECTTSSEEEEECTTT------CEEEEEEEETTTTEEEEEEEEECSSSCCEEEE
T ss_pred eEEeeeecCCCc-c--ceEEECCCCCEEEEecCCC------CeEEEEEEcCCCceeeEccccccCCCCeeEEE
Confidence 777765443221 1 1133222233466555321 24778877777788888887776554444443
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.0027 Score=59.64 Aligned_cols=240 Identities=10% Similarity=0.080 Sum_probs=118.4
Q ss_pred EEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--C--CEEEEECCCCCCcccceeEEEEEcCCCceecCC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--G--TELLVFGRELTAHHISHVIYRYSILTNSWSSGM 209 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 209 (433)
|........+..||.....+..+..+.... ..-..+.. + +.+++.|+. ...+.+||..+++|..+.
T Consensus 26 l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 26 LATCSSDKTIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCS----SCEEEEEECCGGGCSEEEEEET------TSCEEEEEEETTEEEEEE
T ss_pred EEEEECCCcEEEEecCCCcceeeeEecCCC----CcEEEEEeCCCCCCCEEEEecc------CCEEEEEEcCCCceeEee
Confidence 333333445667777655554443222111 11112222 2 455666654 235889999999876554
Q ss_pred CCCCCcceeeEEEe--C--CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCc-ceeEEEE-------------
Q 013929 210 RMNAPRCLFGSASL--G--EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRK-MCSGVFM------------- 271 (433)
Q Consensus 210 ~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~------------- 271 (433)
.+.........+.+ + +.+++.|+.+ ..+.+||..+..-.....+..... -..++..
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 169 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 169 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------
T ss_pred eecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCC
Confidence 43322222222222 2 5566666644 357888887763211000001111 1122222
Q ss_pred -CCEEEEEccccCCCCcccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-C---CEEEEEecC
Q 013929 272 -DGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-N---NELYAADYA 344 (433)
Q Consensus 272 -~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~---~~ly~~gg~ 344 (433)
++.+++.|+.++ .+.+||+.+.. |..+..+....... ..++.. + +.+++.++.
T Consensus 170 ~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~h~~~v-------------~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 170 KESRKFVTGGADN-------LVKIWKYNSDAQTYVLESTLEGHSDWV-------------RDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp CTTCEEEEEETTS-------CEEEEEEETTTTEEEEEEEECCCSSCE-------------EEEEECCCCSSSEEEEEEET
T ss_pred CCCCEEEEEeCCC-------eEEEEEecCCCcceeeEEEEecccCcE-------------eEEEECCCCCCCCeEEEEeC
Confidence 477788877663 36778876543 44433222111110 022222 3 688888888
Q ss_pred CCeEEEEeCCCCc--EE-EeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccC
Q 013929 345 DMEVRKYDKERRL--WF-TIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQ 420 (433)
Q Consensus 345 ~~~i~~yd~~~~~--W~-~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p 420 (433)
.+.|.+||..+.. +. .+........ .-.+++. .+++++++|+.++ .+.+|+++. ...|..+..+.
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~g~~l~~~~~dg------~i~iw~~~~-~~~~~~~~~~~ 298 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPD----VLWRASWSLSGNVLALSGGDN------KVTLWKENL-EGKWEPAGEVH 298 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSS----CEEEEEECSSSCCEEEEESSS------SEEEEEEEE-TTEEEEEEEEC
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCC----cEEEEEEcCCCCEEEEecCCC------cEEEEeCCC-CCcccccccee
Confidence 8999999988763 11 1111111111 1122222 4667777776532 267777753 45787776544
No 36
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.44 E-value=0.0016 Score=58.60 Aligned_cols=113 Identities=12% Similarity=-0.121 Sum_probs=77.8
Q ss_pred eeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEEC
Q 013929 218 FGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 218 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
.++...++.||+..|..+ .+.+.++|+.+++=..--+++...+..+.+..+++||+....+ +.+.+||+
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-------~~v~v~D~ 114 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-------GLGFVWNI 114 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------SEEEEEET
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-------CEEEEEEC
Confidence 355556899999988553 2578999999997544334444444556778899999995433 46899999
Q ss_pred CCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcE
Q 013929 298 ETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 298 ~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
++.+-.. .++.+..+. +++..+++||+..| .+.++.+|+++.+-
T Consensus 115 ~t~~~~~--ti~~~~eG~--------------glt~dg~~L~~SdG-s~~i~~iDp~T~~v 158 (262)
T 3nol_A 115 RNLRQVR--SFNYDGEGW--------------GLTHNDQYLIMSDG-TPVLRFLDPESLTP 158 (262)
T ss_dssp TTCCEEE--EEECSSCCC--------------CEEECSSCEEECCS-SSEEEEECTTTCSE
T ss_pred ccCcEEE--EEECCCCce--------------EEecCCCEEEEECC-CCeEEEEcCCCCeE
Confidence 8876432 222222332 45666778888876 68899999998764
No 37
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.38 E-value=0.035 Score=53.77 Aligned_cols=194 Identities=14% Similarity=0.123 Sum_probs=101.3
Q ss_pred ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
.++..++.|+. ...+.+||..+++-... +............++..++.|+.+ ..+.+||..+..-.
T Consensus 247 ~~~~~l~~~~~------dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 247 YDGRRVVSGAY------DFMVKVWDPETETCLHT--LQGHTNRVYSLQFDGIHVVSGSLD------TSIRVWDVETGNCI 312 (445)
T ss_dssp ECSSCEEEEET------TSCEEEEEGGGTEEEEE--ECCCSSCEEEEEECSSEEEEEETT------SCEEEEETTTCCEE
T ss_pred ECCCEEEEEcC------CCEEEEEECCCCcEeEE--ecCCCCceEEEEECCCEEEEEeCC------CeEEEEECCCCCEE
Confidence 35555555543 23478888877653211 111111222333366666776654 34889999876532
Q ss_pred EcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE
Q 013929 255 VLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV 334 (433)
Q Consensus 255 ~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~ 334 (433)
.. +............++..++.|+.++ .+.+||+.+++-...-..+...... -..+..
T Consensus 313 ~~--~~~~~~~v~~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~-------------v~~~~~ 370 (445)
T 2ovr_B 313 HT--LTGHQSLTSGMELKDNILVSGNADS-------TVKIWDIKTGQCLQTLQGPNKHQSA-------------VTCLQF 370 (445)
T ss_dssp EE--ECCCCSCEEEEEEETTEEEEEETTS-------CEEEEETTTCCEEEEECSTTSCSSC-------------EEEEEE
T ss_pred EE--EcCCcccEEEEEEeCCEEEEEeCCC-------eEEEEECCCCcEEEEEccCCCCCCC-------------EEEEEE
Confidence 21 1111222233445666777777552 4788999876532211111111111 134556
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEEEec-cCCCcccCCCcccEEEEEe-CCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 335 NNELYAADYADMEVRKYDKERRLWFTIG-RLPERANSMNGWGLAFRAC-GDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~~v~-~lp~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
++.+++.|+..+.|.+||..+++....- ...... +.+.-.+++.. ++.++++|+.++. ....+.+|+++.
T Consensus 371 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~dg~--~~~~l~v~df~~ 442 (445)
T 2ovr_B 371 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG--SGGVVWRIRASNTKLVCAVGSRNGT--EETKLLVLDFDV 442 (445)
T ss_dssp CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGG--GTCEEEEEEECSSEEEEEEECSSSS--SCCEEEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCC--CCceEEEEEecCCEEEEEEcccCCC--CccEEEEEECCC
Confidence 7788888888999999999988754321 111111 11111333333 4566677776543 234577777754
No 38
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.38 E-value=0.073 Score=47.92 Aligned_cols=222 Identities=10% Similarity=0.071 Sum_probs=111.7
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEE--ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA--VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL 217 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~ 217 (433)
...+..||+....-..++..............++. .++.+|+.+.. ....+.+||+....-..+.... ....
T Consensus 50 ~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~g~~~~~~~~~~-~~~~ 123 (286)
T 1q7f_A 50 NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQYGQFVRKFGATI-LQHP 123 (286)
T ss_dssp GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTTSCEEEEECTTT-CSCE
T ss_pred CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCCCcEEEEecCcc-CCCc
Confidence 34677888875444444321111100111122333 26789988632 1346889996544333332211 1112
Q ss_pred eeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEE
Q 013929 218 FGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEY 295 (433)
Q Consensus 218 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~y 295 (433)
..++. -+++|||.... ...+.+||+.......+..........+.++ -+|++|+....+ ..+.+|
T Consensus 124 ~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~-------~~i~~~ 190 (286)
T 1q7f_A 124 RGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA-------HCVKVF 190 (286)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG-------TEEEEE
T ss_pred eEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC-------CEEEEE
Confidence 23333 26788887532 2468899977654444322111111122332 258898875432 468899
Q ss_pred ECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCC-eEEEEeCCCCcEEEecc-CCCcccCCC
Q 013929 296 DLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADM-EVRKYDKERRLWFTIGR-LPERANSMN 372 (433)
Q Consensus 296 d~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~-~i~~yd~~~~~W~~v~~-lp~~~~~~~ 372 (433)
|+.......+..... ... +.++++ -+|.||+.+...+ .|.+||+..+.-..+.. .+....
T Consensus 191 ~~~g~~~~~~~~~g~-~~~-------------p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~--- 253 (286)
T 1q7f_A 191 NYEGQYLRQIGGEGI-TNY-------------PIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQC--- 253 (286)
T ss_dssp ETTCCEEEEESCTTT-SCS-------------EEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCE---
T ss_pred cCCCCEEEEEccCCc-cCC-------------CcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcc---
Confidence 986654444432100 011 012333 2678999886665 89999987654444432 111110
Q ss_pred cccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 373 GWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 373 ~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
.+++ .-+++||+.. . + ..+.+|++.
T Consensus 254 ---~~i~~~~~g~l~vs~-~-~-----~~v~v~~~~ 279 (286)
T 1q7f_A 254 ---FDVALMDDGSVVLAS-K-D-----YRLYIYRYV 279 (286)
T ss_dssp ---EEEEEETTTEEEEEE-T-T-----TEEEEEECS
T ss_pred ---eeEEECCCCcEEEEC-C-C-----CeEEEEEcc
Confidence 2232 3478999884 2 1 246677764
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.37 E-value=0.0032 Score=59.85 Aligned_cols=177 Identities=15% Similarity=0.110 Sum_probs=94.9
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEE-E-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-V-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL 217 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~ 217 (433)
...+.++|..+++-...-..... ...++. . +..||+.++. ...+.+||..+++....-..+. ..
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~~~~~~~~~~--~v 76 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVGSN------PMGAVISPDGTKVYVANAH------SNDVSIIDTATNNVIATVPAGS--SP 76 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSSS------EEEEEECTTSSEEEEEEGG------GTEEEEEETTTTEEEEEEECSS--SE
T ss_pred CCEEEEEECCCCeEEEEeecCCC------cceEEECCCCCEEEEECCC------CCeEEEEECCCCeEEEEEECCC--Cc
Confidence 35678888887654332111111 011122 1 3467777643 3468999998887543222222 22
Q ss_pred eeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CC-EEEEEccccCCCCcccceEE
Q 013929 218 FGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DG-KFYVIGGIGGSDSKVLTCGE 293 (433)
Q Consensus 218 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~lyv~GG~~~~~~~~~~~v~ 293 (433)
..++.. +.+||+.+.. -..+.+||+.+++-...-. .......++.. ++ .+|+.++.+ ..+.
T Consensus 77 ~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~ 141 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGD-------KTVS 141 (391)
T ss_dssp EEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTT-------TEEE
T ss_pred cceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCC-------CEEE
Confidence 233332 4467766532 2468999999876533221 11222233332 34 466766543 3688
Q ss_pred EEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 294 EYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 294 ~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
+||+.+++....-..... . ..++.. ++.||+.+...+.|.+||..+++-...
T Consensus 142 ~~d~~~~~~~~~~~~~~~--~--------------~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 142 VINTVTKAVINTVSVGRS--P--------------KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp EEETTTTEEEEEEECCSS--E--------------EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCcEEEEEecCCC--c--------------ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 999988765443211111 0 022222 346777877788999999998865444
No 40
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.27 E-value=0.095 Score=46.86 Aligned_cols=173 Identities=13% Similarity=0.000 Sum_probs=94.8
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.||+.-.. .+.+++||+..+.-..+..... ...+.+++. +++||+.-. ....+.++|+....-
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~------~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDS------QLDRIEVAKMDGTQR 113 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSC
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEEC------CCCEEEEEEcCCCCE
Confidence 5789987532 3468999997764332211111 122344443 679999843 235788999876543
Q ss_pred EEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 254 KVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
+.+..... ......++. +++||+..... ....++++++....-+.+..... . .+.++
T Consensus 114 ~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~~~~~---~------------~P~gi 172 (267)
T 1npe_A 114 RVLFDTGL-VNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNRRILAQDNL---G------------LPNGL 172 (267)
T ss_dssp EEEECSSC-SSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCCEEEECTTC---S------------CEEEE
T ss_pred EEEEECCC-CCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCcEEEEECCC---C------------CCcEE
Confidence 33321111 112334443 68999984221 12467888876543333211110 0 11234
Q ss_pred EEE--CCEEEEEecCCCeEEEEeCCCCcEEEec-cCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 332 AVV--NNELYAADYADMEVRKYDKERRLWFTIG-RLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 332 ~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~-~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
++. ++.||+.....+.|.++|+.+..-..+. .+..+ .+++..++.||+.-.
T Consensus 173 a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P--------~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 173 TFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYP--------FAVTSYGKNLYYTDW 226 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSE--------EEEEEETTEEEEEET
T ss_pred EEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCc--------eEEEEeCCEEEEEEC
Confidence 443 5799999877889999999865433322 11111 334456899999763
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.23 E-value=0.0065 Score=55.96 Aligned_cols=185 Identities=14% Similarity=0.140 Sum_probs=96.3
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCccee-eEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLF-GSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++..++.|+. ...+.+||..+++......+....... .++.. ++..++.|+.+ ..+.+||..+.+.
T Consensus 108 ~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~ 175 (337)
T 1gxr_A 108 DGCTLIVGGE------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTL 175 (337)
T ss_dssp TSSEEEEEES------SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEE
T ss_pred CCCEEEEEcC------CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCce
Confidence 4555555543 236889999888754332222111112 22222 55666666644 3488999988754
Q ss_pred EEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 254 KVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.... .+
T Consensus 176 ~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~v~----------------~~ 230 (337)
T 1gxr_A 176 VRQ--FQGHTDGASCIDISNDGTKLWTGGLD-------NTVRSWDLREGRQLQQHDFTSQIF----------------SL 230 (337)
T ss_dssp EEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECSSCEE----------------EE
T ss_pred eee--eecccCceEEEEECCCCCEEEEEecC-------CcEEEEECCCCceEeeecCCCceE----------------EE
Confidence 322 1111112222222 56677776654 357889998775332211111100 12
Q ss_pred EE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecCCC
Q 013929 332 AV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPSEG 409 (433)
Q Consensus 332 ~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~~ 409 (433)
+. -++.++++++..+.+..||..+.+-..+..-.... ..+.. .++++++.|+.++ .+.+|+....
T Consensus 231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~~dg------~i~~~~~~~~ 297 (337)
T 1gxr_A 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCV-------LSLKFAYCGKWFVSTGKDN------LLNAWRTPYG 297 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCE-------EEEEECTTSSEEEEEETTS------EEEEEETTTC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccce-------eEEEECCCCCEEEEecCCC------cEEEEECCCC
Confidence 22 35777778888889999999887644333222211 22332 3566777776532 4677777543
Q ss_pred C
Q 013929 410 P 410 (433)
Q Consensus 410 ~ 410 (433)
.
T Consensus 298 ~ 298 (337)
T 1gxr_A 298 A 298 (337)
T ss_dssp C
T ss_pred e
Confidence 3
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.22 E-value=0.0035 Score=59.60 Aligned_cols=178 Identities=12% Similarity=0.095 Sum_probs=94.9
Q ss_pred EEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 178 ELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 178 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
.+|+.|+. .+.+.+||..+++-...-... ....+++.. +..||+.++.+ ..+.+||+.+++-..
T Consensus 3 ~l~vs~~~------d~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSE------SDNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS------NDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETT------TTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTEEEE
T ss_pred EEEEEcCC------CCEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC------CeEEEEECCCCeEEE
Confidence 56666653 346899999887653321111 112233332 34677776543 468899998876543
Q ss_pred cCCCCCCCcceeEEEE-CC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE
Q 013929 256 LPSMKNPRKMCSGVFM-DG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV 333 (433)
Q Consensus 256 ~~~~p~~r~~~~~~~~-~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~ 333 (433)
.-... ..-..++.. ++ .||+.+..+ ..+.+||+.+++-...-.... .. ..++.
T Consensus 69 ~~~~~--~~v~~~~~spdg~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~~~~--~~--------------~~~~~ 123 (391)
T 1l0q_A 69 TVPAG--SSPQGVAVSPDGKQVYVTNMAS-------STLSVIDTTSNTVAGTVKTGK--SP--------------LGLAL 123 (391)
T ss_dssp EEECS--SSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECSS--SE--------------EEEEE
T ss_pred EEECC--CCccceEECCCCCEEEEEECCC-------CEEEEEECCCCeEEEEEeCCC--Cc--------------ceEEE
Confidence 22211 122223332 34 466654332 358899999886543321111 11 02333
Q ss_pred E-C-CEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-e-CCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 334 V-N-NELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-C-GDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 334 ~-~-~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
. + ..+|+.++..+.|.+||..+++....-...... ..++. . +..||+.++.+ ..+.+|+..
T Consensus 124 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~~~dg~~l~~~~~~~------~~v~~~d~~ 188 (391)
T 1l0q_A 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP-------KGIAVTPDGTKVYVANFDS------MSISVIDTV 188 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSE-------EEEEECTTSSEEEEEETTT------TEEEEEETT
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCc-------ceEEECCCCCEEEEEeCCC------CEEEEEECC
Confidence 2 3 467788877899999999988765543222211 22222 2 34666766542 236667764
No 43
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.21 E-value=0.079 Score=51.41 Aligned_cols=184 Identities=9% Similarity=0.082 Sum_probs=96.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++..++.|+. ...+.+||..+.+-...-...... -.+++. .++..++.|+.+ ..+.+||..+.+-.
T Consensus 279 ~~~~l~~~~~------d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 279 HGNIVVSGSY------DNTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISASMD------TTIRIWDLENGELM 345 (464)
T ss_dssp ETTEEEEEET------TSCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEETT------SCEEEEETTTTEEE
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEeCC------CcEEEEECCCCcEE
Confidence 3444555543 235889998876543211111111 122222 255566666644 34889999876432
Q ss_pred EcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE
Q 013929 255 VLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV 334 (433)
Q Consensus 255 ~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~ 334 (433)
..+......-..+..++..++.|+.++ .+.+||+.+..-....... .... ......
T Consensus 346 --~~~~~h~~~v~~~~~~~~~l~s~s~dg-------~v~vwd~~~~~~~~~~~~~-~~~~--------------~~~~~~ 401 (464)
T 3v7d_B 346 --YTLQGHTALVGLLRLSDKFLVSAAADG-------SIRGWDANDYSRKFSYHHT-NLSA--------------ITTFYV 401 (464)
T ss_dssp --EEECCCSSCEEEEEECSSEEEEEETTS-------EEEEEETTTCCEEEEEECT-TCCC--------------EEEEEE
T ss_pred --EEEeCCCCcEEEEEEcCCEEEEEeCCC-------cEEEEECCCCceeeeecCC-CCcc--------------EEEEEe
Confidence 222222233344556677777777652 4788999876522211111 1111 134456
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 335 NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
++.+.+.|+ .+.|.+||..+++-......+... .-.+++..++.+++.++. ++...++++++
T Consensus 402 ~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~-----~v~~v~~~~~~l~~~~~~----~g~~~i~~ldf 463 (464)
T 3v7d_B 402 SDNILVSGS-ENQFNIYNLRSGKLVHANILKDAD-----QIWSVNFKGKTLVAAVEK----DGQSFLEILDF 463 (464)
T ss_dssp CSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCS-----EEEEEEEETTEEEEEEEE----TTEEEEEEEEC
T ss_pred CCCEEEEec-CCeEEEEECCCCcEEehhhccCCC-----cEEEEEecCCEEEEEEEe----CCeEEEEEeec
Confidence 777777776 789999999998754432222211 113344456666666554 23445555554
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.17 E-value=0.092 Score=47.89 Aligned_cols=186 Identities=14% Similarity=0.151 Sum_probs=94.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.+++.|+. ...+.+||..+++-.. +.. ... .-.+++. -++.+++.|+.+ ..+.+||..+.+-
T Consensus 76 ~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~ 141 (312)
T 4ery_A 76 DSNLLVSASD------DKTLKIWDVSSGKCLKTLKG-HSN-YVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKC 141 (312)
T ss_dssp TSSEEEEEET------TSEEEEEETTTCCEEEEEEC-CSS-CEEEEEECSSSSEEEEEETT------SCEEEEETTTCCE
T ss_pred CCCEEEEECC------CCEEEEEECCCCcEEEEEcC-CCC-CEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEE
Confidence 4556666654 2358889988765321 111 011 1111122 245566667654 3488899987653
Q ss_pred EEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 254 KVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
.. .++.....-..+.+ ++++++.|+.++ .+.+||+.+.+-...- ....... ...
T Consensus 142 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~--~~~~~~~-------------~~~ 197 (312)
T 4ery_A 142 LK--TLPAHSDPVSAVHFNRDGSLIVSSSYDG-------LCRIWDTASGQCLKTL--IDDDNPP-------------VSF 197 (312)
T ss_dssp EE--EECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEEE--CCSSCCC-------------EEE
T ss_pred EE--EecCCCCcEEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCceeeEE--eccCCCc-------------eEE
Confidence 22 11111111222222 567777777653 4788999877543211 1111110 012
Q ss_pred EE--ECCEEEEEecCCCeEEEEeCCCCcEEEe-ccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 332 AV--VNNELYAADYADMEVRKYDKERRLWFTI-GRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 332 ~~--~~~~ly~~gg~~~~i~~yd~~~~~W~~v-~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+. .+++.++.++..+.|..||..+.+-... ......... ........++.+++.|+.++ .+.+|+...
T Consensus 198 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~sg~~dg------~i~vwd~~~ 268 (312)
T 4ery_A 198 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC---IFANFSVTGGKWIVSGSEDN------LVYIWNLQT 268 (312)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSC---CCEEEECSSSCEEEECCTTS------CEEEEETTT
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEE---EEEEEEeCCCcEEEEECCCC------EEEEEECCC
Confidence 22 2567777788889999999988753322 111111110 11223334677778887643 266777753
No 45
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.16 E-value=0.04 Score=51.08 Aligned_cols=195 Identities=9% Similarity=-0.046 Sum_probs=99.6
Q ss_pred EEEEeec-cceEEEEecCCCcEEeCCCCCCcc---ccccC-CceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCce
Q 013929 133 WVYFSCH-LLEWEAFDPIRRRWMHLPRMTSNE---CFMCS-DKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSW 205 (433)
Q Consensus 133 ~l~~~~~-~~~~~~yd~~~~~W~~l~~~p~~~---~~~~~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 205 (433)
.+|+... ...+..+|+.+.+-...-+.+... ..... ...++.. ++.+|+.+.. ....+++||+.+++-
T Consensus 102 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 102 TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-----KESVIWVVDGGNIKL 176 (353)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----SSCEEEEEETTTTEE
T ss_pred EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-----CCceEEEEcCCCCce
Confidence 4555433 367889999886643221111100 00000 0112221 4567777622 134689999988764
Q ss_pred ecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCC-C-CCcce-eEEEE--CCEEEEE
Q 013929 206 SSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMK-N-PRKMC-SGVFM--DGKFYVI 278 (433)
Q Consensus 206 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~-~r~~~-~~~~~--~g~lyv~ 278 (433)
...-+.. ......++.. +.++|+... ...+.+||+.+.+-......+ . +.... ..+.. ++.+|+.
T Consensus 177 ~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 177 KTAIQNT-GKMSTGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp EEEECCC-CTTCCCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred EEEecCC-CCccceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 3221111 1111222222 456777632 246889999887533221111 1 12222 23333 3457666
Q ss_pred ccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-EC-CEEEEEecCCCeEEEEeCCCC
Q 013929 279 GGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VN-NELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 279 GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~-~~ly~~gg~~~~i~~yd~~~~ 356 (433)
... ...+.+||+.+++....-..+.+ . .++. -+ +.+|+.+...+.|.+||..++
T Consensus 249 ~~~-------~~~v~~~d~~~~~~~~~~~~~~~--~---------------~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 249 DSK-------AAEVLVVDTRNGNILAKVAAPES--L---------------AVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ESS-------SSEEEEEETTTCCEEEEEECSSC--C---------------CEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred eCC-------CCEEEEEECCCCcEEEEEEcCCC--c---------------eEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 432 24688999988875443222222 1 1332 24 468888777889999999988
Q ss_pred cEEEeccC
Q 013929 357 LWFTIGRL 364 (433)
Q Consensus 357 ~W~~v~~l 364 (433)
+....-..
T Consensus 305 ~~~~~~~~ 312 (353)
T 3vgz_A 305 KVVKTFDT 312 (353)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 76544333
No 46
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.16 E-value=0.016 Score=55.70 Aligned_cols=216 Identities=10% Similarity=0.007 Sum_probs=109.9
Q ss_pred eEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC---CCccee
Q 013929 142 EWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN---APRCLF 218 (433)
Q Consensus 142 ~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~~r~~~ 218 (433)
.++.+|+.+.++..+..++......+ .....++.+++.++. ...+.+||+.+++.....+.. ......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v 172 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKS---VRFIDNTRLAIPLLE------DEGMDVLDINSGQTVRLSPPEKYKKKLGFV 172 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCC---CEESSSSEEEEEBTT------SSSEEEEETTTCCEEEECCCHHHHTTCCEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceE---EEEeCCCeEEEEeCC------CCeEEEEECCCCeEeeecCcccccccCCce
Confidence 57778887766655443332221111 011126788888754 234899999988765432221 111122
Q ss_pred eEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEE
Q 013929 219 GSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEE 294 (433)
Q Consensus 219 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~ 294 (433)
..+.+ ++++++.++.+ ..+.+||+.+.+-...-.. ........+.. +..+|+.++.+ ..+.+
T Consensus 173 ~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-------~~i~~ 238 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWIS-------EDISV 238 (433)
T ss_dssp EEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTT-------TEEEE
T ss_pred eEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCC-------CcEEE
Confidence 22233 77888887643 4588999988654321111 11111223333 34566665443 25889
Q ss_pred EECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CC-EEEEEec-------CCCeEEEEeCCCCcEEEeccCC
Q 013929 295 YDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NN-ELYAADY-------ADMEVRKYDKERRLWFTIGRLP 365 (433)
Q Consensus 295 yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~-~ly~~gg-------~~~~i~~yd~~~~~W~~v~~lp 365 (433)
||+.+++....-..... . ..++.. ++ .+++.+. ..+.|.+||+.+++-......+
T Consensus 239 ~d~~~~~~~~~~~~~~~--~--------------~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~ 302 (433)
T 3bws_A 239 IDRKTKLEIRKTDKIGL--P--------------RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP 302 (433)
T ss_dssp EETTTTEEEEECCCCSE--E--------------EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE
T ss_pred EECCCCcEEEEecCCCC--c--------------eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC
Confidence 99988765433221111 1 022222 44 4555442 2468999999888654432222
Q ss_pred CcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 366 ERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
.... +.++...++.+|+.++.++ .+.+|+++
T Consensus 303 ~~~~-----~~~~~~~g~~l~~~~~~~~------~v~v~d~~ 333 (433)
T 3bws_A 303 GNKR-----HIVSGNTENKIYVSDMCCS------KIEVYDLK 333 (433)
T ss_dssp ECEE-----EEEECSSTTEEEEEETTTT------EEEEEETT
T ss_pred CCcc-----eEEECCCCCEEEEEecCCC------EEEEEECC
Confidence 2111 1222122346888765432 46677774
No 47
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.14 E-value=0.04 Score=49.04 Aligned_cols=214 Identities=12% Similarity=-0.037 Sum_probs=107.7
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCccee
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLF 218 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~ 218 (433)
...+..||+.+.....++...... ...++.. ++.+|+... .+.+++||+.++....+..... ....
T Consensus 45 ~~~i~~~~~~~~~~~~~~~~~~~~-----p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~~~~~~~~~-~~p~ 111 (270)
T 1rwi_B 45 YGRVVKLATGSTGTTVLPFNGLYQ-----PQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQTVLPFDGL-NYPE 111 (270)
T ss_dssp SCEEEEECC-----EECCCCSCCS-----CCCEEECTTCCEEEEET-------TTEEEEECTTCSCCEECCCCSC-SSEE
T ss_pred CCcEEEecCCCcccceEeeCCcCC-----cceeEECCCCCEEEEcC-------CCEEEEEeCCCceEeeeecCCc-CCCc
Confidence 346777888766554443211111 1122332 467888753 2358999998876554432111 1223
Q ss_pred eEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEE
Q 013929 219 GSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYD 296 (433)
Q Consensus 219 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd 296 (433)
.++.. +++||+.... ...+.+||..+........... ......++. +|++|+..... ..+.+||
T Consensus 112 ~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~-------~~i~~~~ 177 (270)
T 1rwi_B 112 GLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTDN-------NRVVKLE 177 (270)
T ss_dssp EEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGGG-------TEEEEEC
T ss_pred ceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECCC-------CEEEEEe
Confidence 33333 6788887432 2457888877665443321111 112233333 57888875432 3578899
Q ss_pred CCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCccc
Q 013929 297 LETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWG 375 (433)
Q Consensus 297 ~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~ 375 (433)
+.+..-........ .. +..++.. +|.||+.....+.|.+||+.+..-..... .. .. .-
T Consensus 178 ~~~~~~~~~~~~~~--~~-------------p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~-~~----~p 236 (270)
T 1rwi_B 178 AESNNQVVLPFTDI--TA-------------PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF-TG-LN----TP 236 (270)
T ss_dssp TTTCCEEECCCSSC--CS-------------EEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC-CS-CS----CE
T ss_pred cCCCceEeecccCC--CC-------------ceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc-CC-CC----Cc
Confidence 88766443321110 11 0123333 46899987667889999998764333211 11 00 01
Q ss_pred EEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 376 LAFRA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 376 ~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
.+++. -+|+||+..... ..+.+++++
T Consensus 237 ~~i~~~~~g~l~v~~~~~------~~v~~~~~~ 263 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGN------DRVVKLTSL 263 (270)
T ss_dssp EEEEECTTCCEEEEEGGG------TEEEEECCC
T ss_pred eeEEECCCCCEEEEECCC------CEEEEEcCC
Confidence 23333 357888876432 235555554
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.013 Score=54.78 Aligned_cols=181 Identities=7% Similarity=0.030 Sum_probs=97.2
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEEEe--C--CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEE
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSASL--G--EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGV 269 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~ 269 (433)
.+.+||...+++..+..+...........+ + +.+++.|+.+ ..+.+||..++.|..+..+.........+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 478888876666554433322222222332 2 5666777654 34888999998877665444333333333
Q ss_pred EE--C--CEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-----------
Q 013929 270 FM--D--GKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV----------- 334 (433)
Q Consensus 270 ~~--~--g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~----------- 334 (433)
.+ + +.+++.|+.+ ..+.+||+.+..-.....+....... .+++..
T Consensus 108 ~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~v-------------~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGV-------------NSASWAPATIEEDGEHN 167 (379)
T ss_dssp EECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTTCE-------------EEEEECCCC--------
T ss_pred EeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCCce-------------EEEEEcCcccccccccc
Confidence 33 2 5677777655 25788888776321110000000000 011111
Q ss_pred ---CCEEEEEecCCCeEEEEeCCCC--cEEEeccCCCcccCCCcccEEEEEe-C---CEEEEEcCCCCCCCCeeEEEEee
Q 013929 335 ---NNELYAADYADMEVRKYDKERR--LWFTIGRLPERANSMNGWGLAFRAC-G---DRLIVIGGPKASGEGFIELNSWV 405 (433)
Q Consensus 335 ---~~~ly~~gg~~~~i~~yd~~~~--~W~~v~~lp~~~~~~~~~~~~~~~~-~---~~l~v~GG~~~~~~~~~~~~~~~ 405 (433)
++.+++.|+..+.|.+||..++ .|..+..+...... -.+++.. + +.+++.|+.+. .+.+|+
T Consensus 168 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~----v~~~~~sp~~~~~~~l~s~~~dg------~i~iwd 237 (379)
T 3jrp_A 168 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWSPTVLLRSYLASVSQDR------TCIIWT 237 (379)
T ss_dssp --CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEECCCCSSSEEEEEEETTS------CEEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc----EeEEEECCCCCCCCeEEEEeCCC------EEEEEe
Confidence 4778888888889999998654 36555544432221 1233332 3 67888887643 266777
Q ss_pred cCCCC
Q 013929 406 PSEGP 410 (433)
Q Consensus 406 ~~~~~ 410 (433)
+....
T Consensus 238 ~~~~~ 242 (379)
T 3jrp_A 238 QDNEQ 242 (379)
T ss_dssp ESSTT
T ss_pred CCCCC
Confidence 76543
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.12 E-value=0.022 Score=52.22 Aligned_cols=210 Identities=9% Similarity=0.035 Sum_probs=104.3
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR 210 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 210 (433)
+++.......+..||..+.+......+.... ..-..+.. ++..++.|+. ...+.+||..+++....-.
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~------dg~v~~~d~~~~~~~~~~~ 180 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSA----PACYALAISPDSKVCFSCCS------DGNIAVWDLHNQTLVRQFQ 180 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECSS----SCEEEEEECTTSSEEEEEET------TSCEEEEETTTTEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccCC----CceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCceeeeee
Confidence 3444444566788888876643322211111 00111222 4455555543 2358899998876432211
Q ss_pred CCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcc
Q 013929 211 MNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKV 288 (433)
Q Consensus 211 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~ 288 (433)
..... ...++.. ++..++.|+.+ ..+.+||..+..-...-..+ .....++. -+++.+++|+.++
T Consensus 181 ~~~~~-i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~----- 246 (337)
T 1gxr_A 181 GHTDG-ASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGMESS----- 246 (337)
T ss_dssp CCSSC-EEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEETTS-----
T ss_pred cccCc-eEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcCCC-----
Confidence 11111 1222222 55566666543 45889998876532221111 11122222 3566777776542
Q ss_pred cceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCc
Q 013929 289 LTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPER 367 (433)
Q Consensus 289 ~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~ 367 (433)
.+.+||+.+..-..+........ .+.. -++++++.++..+.+.+||..+++-.........
T Consensus 247 --~i~~~~~~~~~~~~~~~~~~~v~----------------~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 308 (337)
T 1gxr_A 247 --NVEVLHVNKPDKYQLHLHESCVL----------------SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS 308 (337)
T ss_dssp --CEEEEETTSSCEEEECCCSSCEE----------------EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred --cEEEEECCCCCeEEEcCCcccee----------------EEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCc
Confidence 47889998775433322111100 1222 2567777888889999999988765433221111
Q ss_pred ccCCCcccEEEEE-eCCEEEEEcCC
Q 013929 368 ANSMNGWGLAFRA-CGDRLIVIGGP 391 (433)
Q Consensus 368 ~~~~~~~~~~~~~-~~~~l~v~GG~ 391 (433)
. .+++. .++++++.|+.
T Consensus 309 v-------~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 309 V-------LSCDISVDDKYIVTGSG 326 (337)
T ss_dssp E-------EEEEECTTSCEEEEEET
T ss_pred E-------EEEEECCCCCEEEEecC
Confidence 1 22322 35667777765
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.08 E-value=0.027 Score=52.66 Aligned_cols=237 Identities=12% Similarity=0.106 Sum_probs=112.8
Q ss_pred EEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN 212 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p 212 (433)
|.+......+..||..+.++..+..+..... .-..+.. .++.+++.|+. ...+.+||..++++.....+.
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKEHNG---QVTGVDWAPDSNRIVTCGT------DRNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEECCSS---CEEEEEEETTTTEEEEEET------TSCEEEEEEETTEEEEEEECC
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecCCCC---cccEEEEeCCCCEEEEEcC------CCeEEEEECCCCeeeeeEEee
Confidence 3333344567788888876554433322110 0011111 24555566553 235889999888765432221
Q ss_pred -CCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCC-eEEcCCCCCC-Ccce-eEEE-ECCEEEEEccccCCCC
Q 013929 213 -APRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQT-WKVLPSMKNP-RKMC-SGVF-MDGKFYVIGGIGGSDS 286 (433)
Q Consensus 213 -~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~-r~~~-~~~~-~~g~lyv~GG~~~~~~ 286 (433)
....-.+++.. ++..++.|+.+ ..+.+||..+.. |........+ .... .++. -+++.++.|+.++
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--- 164 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF--- 164 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS---
T ss_pred cCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC---
Confidence 11112222222 55666666644 336666666543 3322211111 1111 2222 2566777777652
Q ss_pred cccceEEEEECCCCc---------eEe-------cCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeE
Q 013929 287 KVLTCGEEYDLETET---------WTE-------IPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEV 348 (433)
Q Consensus 287 ~~~~~v~~yd~~t~~---------W~~-------~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i 348 (433)
.+.+||+.... |.. +..+...... ...+.+ ++..++.++..+.|
T Consensus 165 ----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 165 ----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--------------VHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp ----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC--------------EEEEEECSSSSEEEEEETTTEE
T ss_pred ----CEEEEEcccccccccccccccccccchhhheEecCCCCCe--------------EEEEEECCCCCEEEEEeCCCEE
Confidence 46788864221 111 1011100000 012222 56677777788899
Q ss_pred EEEeCCCCcEEEeccCCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEeccc
Q 013929 349 RKYDKERRLWFTIGRLPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARK 419 (433)
Q Consensus 349 ~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~ 419 (433)
.+||..+++-...-...... -.+++ ..++++++.| .++ .+.+|+++....+|..+..+
T Consensus 227 ~i~d~~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~~-~d~------~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 227 CLADADKKMAVATLASETLP------LLAVTFITESSLVAAG-HDC------FPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp EEEEGGGTTEEEEEECSSCC------EEEEEEEETTEEEEEE-TTS------SCEEEEEETTTTEEEECCCC
T ss_pred EEEECCCCceeEEEccCCCC------eEEEEEecCCCEEEEE-eCC------eEEEEEccCcCceEEEeecc
Confidence 99999877633221111111 02222 3467766666 322 25577775433667666443
No 51
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.07 E-value=0.0092 Score=53.63 Aligned_cols=136 Identities=6% Similarity=-0.125 Sum_probs=86.3
Q ss_pred eeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEEC
Q 013929 218 FGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 218 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
.++...++.||+..|..+ .+.++|+++++=..-- ++...+..+.+..+++||+....+ +.+.+||+
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-------~~v~V~D~ 123 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-------GLLFTWSG 123 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-------CEEEEEET
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-------CEEEEEEC
Confidence 456666899999988543 2889999998642222 444334456778899999985433 46899999
Q ss_pred CCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEE-ec--cCCCcccCCCcc
Q 013929 298 ETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFT-IG--RLPERANSMNGW 374 (433)
Q Consensus 298 ~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~-v~--~lp~~~~~~~~~ 374 (433)
++.+-.. .++.+..+. +++..+++||+..| .+.++.+|+++.+-.. +. .-+.+....
T Consensus 124 ~Tl~~~~--ti~~~~eGw--------------GLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~l--- 183 (268)
T 3nok_A 124 MPPQRER--TTRYSGEGW--------------GLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELI--- 183 (268)
T ss_dssp TTTEEEE--EEECSSCCC--------------CEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCE---
T ss_pred CcCcEEE--EEeCCCcee--------------EEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccc---
Confidence 8875432 222222232 46777889999886 7899999999976432 22 112221111
Q ss_pred cEEEEEeCCEEEEE
Q 013929 375 GLAFRACGDRLIVI 388 (433)
Q Consensus 375 ~~~~~~~~~~l~v~ 388 (433)
..+...+|+||+-
T Consensus 184 -NeLe~~dG~lyan 196 (268)
T 3nok_A 184 -NELECANGVIYAN 196 (268)
T ss_dssp -EEEEEETTEEEEE
T ss_pred -cccEEeCCEEEEE
Confidence 2244458888853
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.02 E-value=0.019 Score=54.14 Aligned_cols=186 Identities=10% Similarity=0.030 Sum_probs=94.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++..++.|+. ...+.+||..+++-...-..... ...+++.. +..+++.|+.++ .+.+||..+.+-
T Consensus 150 dg~~l~sgs~------dg~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~~~ 216 (357)
T 4g56_B 150 DGTQAVSGGK------DFSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGEDG------RILLWDTRKPKP 216 (357)
T ss_dssp SSSEEEEEET------TSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETTS------CEEECCTTSSSC
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccCC------ceEEEECCCCce
Confidence 4566666654 23488899988764322111111 11122222 234666766543 478888887653
Q ss_pred EEcCCCCCCCcceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCE
Q 013929 254 KVLPSMKNPRKMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPL 330 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~ 330 (433)
...............+.+ ++.+++.|+.++ .+.+||+.+.+-.. .+....... ..
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-------~i~~wd~~~~~~~~--~~~~~~~~v-------------~~ 274 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-------NVSLVNIKNPDSAQ--TSAVHSQNI-------------TG 274 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-------CEEEEESSCGGGCE--EECCCSSCE-------------EE
T ss_pred eeeeeeccccccccchhhhhcccceEEEeeccc-------ceeEEECCCCcEeE--EEeccceeE-------------EE
Confidence 222121111222223333 356777776652 36789987654111 111111110 02
Q ss_pred EEEE-CC-EEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE--eCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 331 VAVV-NN-ELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA--CGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 331 ~~~~-~~-~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
++.. ++ ++++.|+..+.|.+||..+++-... +... ..-.+++. .++++++.||.++ .+.+|++
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~--~~H~-----~~V~~vafsP~d~~~l~s~s~Dg------~v~iW~~ 341 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRD--LSHR-----DFVTGVAWSPLDHSKFTTVGWDH------KVLHHHL 341 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEE--CCCS-----SCEEEEEECSSSTTEEEEEETTS------CEEEEEC
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE--CCCC-----CCEEEEEEeCCCCCEEEEEcCCC------eEEEEEC
Confidence 2221 34 5666777888999999988765433 2211 11133433 3678888888743 2778887
Q ss_pred CCC
Q 013929 407 SEG 409 (433)
Q Consensus 407 ~~~ 409 (433)
..+
T Consensus 342 ~~~ 344 (357)
T 4g56_B 342 PSE 344 (357)
T ss_dssp C--
T ss_pred CCC
Confidence 543
No 53
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.95 E-value=0.022 Score=55.17 Aligned_cols=186 Identities=14% Similarity=0.150 Sum_probs=101.3
Q ss_pred EEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 173 LAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 173 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
+..++..++.|+. ...+.+||..+++-... +........+...++.+++.|+.++ .+.+||..++.
T Consensus 139 ~~~d~~~l~~g~~------dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg------~i~vwd~~~~~ 204 (435)
T 1p22_A 139 LQYDDQKIVSGLR------DNTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS------TVRVWDVNTGE 204 (435)
T ss_dssp EECCSSEEEEEES------SSCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS------CEEEEESSSCC
T ss_pred EEECCCEEEEEeC------CCeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC------eEEEEECCCCc
Confidence 3346666777754 23588999887764322 1111122233444777778877553 48889988875
Q ss_pred eEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEec-CCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 253 WKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI-PNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 253 W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
-... +......-..+..++..++.|+.++ .+.+||+.+..-... ..+...... -..
T Consensus 205 ~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~--------------v~~ 261 (435)
T 1p22_A 205 MLNT--LIHHCEAVLHLRFNNGMMVTCSKDR-------SIAVWDMASPTDITLRRVLVGHRAA--------------VNV 261 (435)
T ss_dssp EEEE--ECCCCSCEEEEECCTTEEEEEETTS-------CEEEEECSSSSCCEEEEEECCCSSC--------------EEE
T ss_pred EEEE--EcCCCCcEEEEEEcCCEEEEeeCCC-------cEEEEeCCCCCCceeeeEecCCCCc--------------EEE
Confidence 4221 1112222233444566777777652 478899877542111 001111111 123
Q ss_pred EEECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 332 AVVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 332 ~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+..++..++.|+..+.|.+||..+++-.. .+..... ....+..++.+++.|+.++ .+.+|+...
T Consensus 262 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~--~~~~~~~-----~v~~~~~~~~~l~~g~~dg------~i~iwd~~~ 325 (435)
T 1p22_A 262 VDFDDKYIVSASGDRTIKVWNTSTCEFVR--TLNGHKR-----GIACLQYRDRLVVSGSSDN------TIRLWDIEC 325 (435)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEE--EEECCSS-----CEEEEEEETTEEEEEETTS------CEEEEETTT
T ss_pred EEeCCCEEEEEeCCCeEEEEECCcCcEEE--EEcCCCC-----cEEEEEeCCCEEEEEeCCC------eEEEEECCC
Confidence 34467777778888999999998875332 2221111 1333444667777776543 266777743
No 54
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.95 E-value=0.15 Score=45.84 Aligned_cols=202 Identities=5% Similarity=-0.074 Sum_probs=104.2
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceee
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFG 219 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~ 219 (433)
..+..||+. .+...+. +|... .....++.. ++.+|+.... ...+++||+ +++...............
T Consensus 78 ~~i~~~~~~-g~~~~~~-~~~~~---~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYT-LPNPD---SAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPNKGSYPSF 145 (299)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTT---CCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred CeEEEECCC-CcEEEEe-CCCcC---CCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCCCCCCCce
Confidence 457788876 4454432 11110 011122222 5788886532 235889999 666554321111122233
Q ss_pred EEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcce-eEEEE-CCEEEEEccccCCCCcccceEEEEE
Q 013929 220 SASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMC-SGVFM-DGKFYVIGGIGGSDSKVLTCGEEYD 296 (433)
Q Consensus 220 ~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd 296 (433)
++.. ++++|+... ....+++||+ +++...+.. +...... +.+.. +|++|+.... ...+.+||
T Consensus 146 i~~~~~g~l~v~~~------~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~ 210 (299)
T 2z2n_A 146 ITLGSDNALWFTEN------QNNAIGRITE-SGDITEFKI-PTPASGPVGITKGNDDALWFVEII-------GNKIGRIT 210 (299)
T ss_dssp EEECTTSCEEEEET------TTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETT-------TTEEEEEC
T ss_pred EEEcCCCCEEEEeC------CCCEEEEEcC-CCcEEEeeC-CCCCCcceeEEECCCCCEEEEccC-------CceEEEEC
Confidence 3333 568888642 1356899999 777765421 1111122 23332 5778887432 23578899
Q ss_pred CCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCccc
Q 013929 297 LETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWG 375 (433)
Q Consensus 297 ~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~ 375 (433)
+ +++...+. .+...... ..++.. +|.||+.....+.|.+||+ +++...+. ++..... -
T Consensus 211 ~-~g~~~~~~-~~~~~~~~-------------~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~-~~~~~~~----~ 269 (299)
T 2z2n_A 211 T-SGEITEFK-IPTPNARP-------------HAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYP-IQIKSAE----P 269 (299)
T ss_dssp T-TCCEEEEE-CSSTTCCE-------------EEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEE-CSSSSCC----E
T ss_pred C-CCcEEEEE-CCCCCCCc-------------eeEEECCCCCEEEeccCCceEEEECC-CCceEEEe-CCCCCCc----c
Confidence 9 77776542 11111110 123332 5789988766788999999 45554442 2211110 1
Q ss_pred EEEEEeCCEEEEEcC
Q 013929 376 LAFRACGDRLIVIGG 390 (433)
Q Consensus 376 ~~~~~~~~~l~v~GG 390 (433)
.+++..+++||+...
T Consensus 270 ~~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 270 HGICFDGETIWFAME 284 (299)
T ss_dssp EEEEECSSCEEEEET
T ss_pred ceEEecCCCEEEEec
Confidence 223336788888753
No 55
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.92 E-value=0.15 Score=45.74 Aligned_cols=202 Identities=8% Similarity=-0.033 Sum_probs=106.0
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC-CCcce
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN-APRCL 217 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~ 217 (433)
...+..||+. ..+.......... ....++. .++.+|+.... ...+++||+. ++.+.+. +| .....
T Consensus 35 ~~~v~~~d~~-~~~~~~~~~~~~~----~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~~~~~ 101 (299)
T 2z2n_A 35 ANMISCINLD-GKITEYPLPTPDA----KVMCLTISSDGEVWFTENA------ANKIGRITKK-GIIKEYT-LPNPDSAP 101 (299)
T ss_dssp TTEEEEECTT-CCEEEEECSSTTC----CEEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEE-CSSTTCCE
T ss_pred CCcEEEEcCC-CCeEEecCCcccC----ceeeEEECCCCCEEEeCCC------CCeEEEECCC-CcEEEEe-CCCcCCCc
Confidence 3568889988 7776543211111 1112222 25678877432 2358889986 5554432 12 11222
Q ss_pred eeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEE
Q 013929 218 FGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEY 295 (433)
Q Consensus 218 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~y 295 (433)
..++.. +++||+.... ...+.+||+ +++................+.. +|++|+.... ...+.+|
T Consensus 102 ~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~ 167 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ-------NNAIGRI 167 (299)
T ss_dssp EEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-------TTEEEEE
T ss_pred eeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-------CCEEEEE
Confidence 334443 5788887432 246888998 6665544221111122233332 5788886421 2357889
Q ss_pred ECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcc
Q 013929 296 DLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGW 374 (433)
Q Consensus 296 d~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~ 374 (433)
|+ +++...+. .+...... ..++.. ++.||+.....+.+.+||+ +++...+. ++.....
T Consensus 168 ~~-~g~~~~~~-~~~~~~~~-------------~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~~---- 226 (299)
T 2z2n_A 168 TE-SGDITEFK-IPTPASGP-------------VGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK-IPTPNAR---- 226 (299)
T ss_dssp CT-TCCEEEEE-CSSTTCCE-------------EEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSSTTCC----
T ss_pred cC-CCcEEEee-CCCCCCcc-------------eeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE-CCCCCCC----
Confidence 99 77776542 11111110 123332 5789988766788999999 77776642 2211110
Q ss_pred cEEEEE-eCCEEEEEc
Q 013929 375 GLAFRA-CGDRLIVIG 389 (433)
Q Consensus 375 ~~~~~~-~~~~l~v~G 389 (433)
-.+++. -+|+||+..
T Consensus 227 ~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 227 PHAITAGAGIDLWFTE 242 (299)
T ss_dssp EEEEEECSTTCEEEEE
T ss_pred ceeEEECCCCCEEEec
Confidence 123333 356888875
No 56
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.91 E-value=0.032 Score=50.40 Aligned_cols=140 Identities=15% Similarity=0.037 Sum_probs=84.8
Q ss_pred eeEEEeC-CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEE
Q 013929 218 FGSASLG-EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYD 296 (433)
Q Consensus 218 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd 296 (433)
++++..+ +.||+..|..+ .+.+.++|+.+++=..--+++......+.+..++++|+..-. .+.+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-------~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-------KNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-------CSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-------CCEEEEEE
Confidence 5666655 89999877432 367999999998754432333333445667788999999543 24689999
Q ss_pred CCCCceEecCCCCCC-CCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEE-Eec--cCCCcccCCC
Q 013929 297 LETETWTEIPNMSPA-RGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWF-TIG--RLPERANSMN 372 (433)
Q Consensus 297 ~~t~~W~~~~~~p~~-r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~-~v~--~lp~~~~~~~ 372 (433)
+.+.+= +..++.+ ..+. +++.-++++|+..| .+.+.++|+++.+-. .+. .-+.+....
T Consensus 93 ~~t~~v--~~~i~~g~~~g~--------------glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~- 154 (266)
T 2iwa_A 93 RRTLSN--IKNFTHQMKDGW--------------GLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRL- 154 (266)
T ss_dssp TTTTEE--EEEEECCSSSCC--------------EEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCE-
T ss_pred CCCCcE--EEEEECCCCCeE--------------EEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccc-
Confidence 987642 2222222 2222 45555678898775 779999999987533 222 111221111
Q ss_pred cccEEEEEeCCEEEEEc
Q 013929 373 GWGLAFRACGDRLIVIG 389 (433)
Q Consensus 373 ~~~~~~~~~~~~l~v~G 389 (433)
..+...+++||+--
T Consensus 155 ---nele~~dg~lyvn~ 168 (266)
T 2iwa_A 155 ---NELEYINGEVWANI 168 (266)
T ss_dssp ---EEEEEETTEEEEEE
T ss_pred ---eeEEEECCEEEEec
Confidence 22333488888764
No 57
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.90 E-value=0.034 Score=51.29 Aligned_cols=201 Identities=12% Similarity=0.168 Sum_probs=100.2
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--C--CEEEEEccCCCCCCcCCceEEEeCCCC-
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--G--EIAILAGGSDLEGNILSSAEMYNSETQ- 251 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~- 251 (433)
+.+++.|+. ...+.+||..+++|..+..+.........+.+ + +.+++.|+.++ .+.+||..+.
T Consensus 71 ~~~l~s~s~------D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~ 138 (316)
T 3bg1_A 71 GNILASCSY------DRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEG 138 (316)
T ss_dssp SSCEEEEET------TSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSS
T ss_pred CCEEEEEEC------CCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCC
Confidence 455556654 23588899988877544322211111122222 2 45666766543 4677777765
Q ss_pred CeEEcCCCCCCCcceeEEEE-------------------CCEEEEEccccCCCCcccceEEEEECCC-CceEecCCCCCC
Q 013929 252 TWKVLPSMKNPRKMCSGVFM-------------------DGKFYVIGGIGGSDSKVLTCGEEYDLET-ETWTEIPNMSPA 311 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~~~~~~-------------------~g~lyv~GG~~~~~~~~~~~v~~yd~~t-~~W~~~~~~p~~ 311 (433)
.|.....+.........+.. .+++++.|+.++ .+..||..+ ..|..+..+...
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~-------~v~lWd~~~~~~~~~~~~l~~h 211 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN-------LIKLWKEEEDGQWKEEQKLEAH 211 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS-------BCCEEEECTTSCEEEEECCBCC
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC-------eEEEEEeCCCCccceeeecccC
Confidence 46543222111111001110 134566666552 356677753 457655433211
Q ss_pred CCCCCCCCcCCCCcCCCCEEEEE--C----CEEEEEecCCCeEEEEeCCC---CcEEE--eccCCCcccCCCcccEEEEE
Q 013929 312 RGGAARGTEMPASAEAPPLVAVV--N----NELYAADYADMEVRKYDKER---RLWFT--IGRLPERANSMNGWGLAFRA 380 (433)
Q Consensus 312 r~~~~~~~~~~~~~~~~~~~~~~--~----~~ly~~gg~~~~i~~yd~~~---~~W~~--v~~lp~~~~~~~~~~~~~~~ 380 (433)
.... ..+.. + +.+++.|+..+.|.+||..+ +.|.. +...... -.+++.
T Consensus 212 ~~~V--------------~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~-------v~~v~~ 270 (316)
T 3bg1_A 212 SDWV--------------RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDV-------VWHVSW 270 (316)
T ss_dssp SSCE--------------EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSC-------EEEEEE
T ss_pred CCce--------------EEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCc-------EEEEEE
Confidence 1110 11222 2 26677788889999999876 33421 1111111 122332
Q ss_pred -eCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEecccCCCcE
Q 013929 381 -CGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARKQSANF 424 (433)
Q Consensus 381 -~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~p~~~~ 424 (433)
.++++++.||.+. .+.+|+... ..+|..+..+..+-.
T Consensus 271 sp~g~~las~~~D~------~v~lw~~~~-~g~~~~~~~~~~~~~ 308 (316)
T 3bg1_A 271 SITANILAVSGGDN------KVTLWKESV-DGQWVCISDVNKGQG 308 (316)
T ss_dssp CTTTCCEEEEESSS------CEEEEEECT-TSCEEEEEECC----
T ss_pred cCCCCEEEEEcCCC------eEEEEEECC-CCcEEEeeeccCCCC
Confidence 4567777777643 377888753 468999988876543
No 58
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.87 E-value=0.029 Score=52.76 Aligned_cols=184 Identities=10% Similarity=0.037 Sum_probs=92.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce-eeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL-FGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
++..++.|+. ...+.+||..+++-... +...... .+++.. +..+++.|+.++ .+.+||..+.+
T Consensus 138 dg~~l~sgs~------d~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~~~~ 203 (344)
T 4gqb_B 138 SGTQAVSGSK------DICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDN------RILLWDTRCPK 203 (344)
T ss_dssp TSSEEEEEET------TSCEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTS------CEEEEETTSSS
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeecccc------ccccccccccc
Confidence 5566666654 23588999988754221 1111111 122221 335777776553 47889998875
Q ss_pred eEEcCCCCCCCcceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 253 WKVLPSMKNPRKMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 253 W~~~~~~p~~r~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
-...-..........++.. ++++++.|+.+ ..+.+||+.+.+- +..+....... .
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-------g~v~~wd~~~~~~--~~~~~~h~~~v-------------~ 261 (344)
T 4gqb_B 204 PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-------GTVSLVDTKSTSC--VLSSAVHSQCV-------------T 261 (344)
T ss_dssp CEEECC----CCCEEEEEECSSCTTEEEEEETT-------SEEEEEESCC--C--CEEEECCSSCE-------------E
T ss_pred eeeeeecceeeccceeeeecCCCCcceEEeccC-------CcEEEEECCCCcE--EEEEcCCCCCE-------------E
Confidence 4322111111111122222 56677777765 2478899876531 11111101110 0
Q ss_pred EEEEE-CC-EEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE--eCCEEEEEcCCCCCCCCeeEEEEee
Q 013929 330 LVAVV-NN-ELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA--CGDRLIVIGGPKASGEGFIELNSWV 405 (433)
Q Consensus 330 ~~~~~-~~-~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~ 405 (433)
+++.. ++ ++++.|+..+.|.+||..+++-..+.. +...-.+++. .+..|++.||.+. .+.+|.
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~-------H~~~V~~v~~sp~~~~llas~s~D~------~v~~w~ 328 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA-------HRDFVRDATWSPLNHSLLTTVGWDH------QVVHHV 328 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC-------CSSCEEEEEECSSSTTEEEEEETTS------CEEEEE
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC-------CCCCEEEEEEeCCCCeEEEEEcCCC------eEEEEE
Confidence 12222 34 566677788899999998876433221 1111133333 2456777787643 267787
Q ss_pred cCC
Q 013929 406 PSE 408 (433)
Q Consensus 406 ~~~ 408 (433)
+..
T Consensus 329 v~~ 331 (344)
T 4gqb_B 329 VPT 331 (344)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 59
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.86 E-value=0.16 Score=46.45 Aligned_cols=206 Identities=11% Similarity=0.009 Sum_probs=105.7
Q ss_pred ccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce
Q 013929 139 HLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL 217 (433)
Q Consensus 139 ~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~ 217 (433)
....++.||+... .......+.. ...++. -++++|+..... ....+++||+.+++.+.+...+..+..
T Consensus 51 ~~~~I~~~d~~g~-~~~~~~~~~~------p~gia~~~dG~l~vad~~~----~~~~v~~~d~~~g~~~~~~~~~~~~~~ 119 (306)
T 2p4o_A 51 EVGEIVSITPDGN-QQIHATVEGK------VSGLAFTSNGDLVATGWNA----DSIPVVSLVKSDGTVETLLTLPDAIFL 119 (306)
T ss_dssp TTTEEEEECTTCC-EEEEEECSSE------EEEEEECTTSCEEEEEECT----TSCEEEEEECTTSCEEEEEECTTCSCE
T ss_pred CCCeEEEECCCCc-eEEEEeCCCC------ceeEEEcCCCcEEEEeccC----CcceEEEEcCCCCeEEEEEeCCCcccc
Confidence 3456888888763 2222112211 112222 256788875321 112488899988888766544444443
Q ss_pred eeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCC---eEEcCC----CCCC--CcceeEEEECCEEEEEccccCCCCc
Q 013929 218 FGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQT---WKVLPS----MKNP--RKMCSGVFMDGKFYVIGGIGGSDSK 287 (433)
Q Consensus 218 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~----~p~~--r~~~~~~~~~g~lyv~GG~~~~~~~ 287 (433)
...+.. ++.+|+.-. ....++++|+.+.. |..-+. .+.. ....+...-++.||+.--
T Consensus 120 ~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~------- 186 (306)
T 2p4o_A 120 NGITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT------- 186 (306)
T ss_dssp EEEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-------
T ss_pred CcccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC-------
Confidence 343333 557777631 23578999987642 221110 1111 111223334567888732
Q ss_pred ccceEEEEECCC-CceE---ecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEec
Q 013929 288 VLTCGEEYDLET-ETWT---EIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 288 ~~~~v~~yd~~t-~~W~---~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~ 362 (433)
..+.+++||+.. ++.. .+..... +..+++ -+|+||+.....+.|.+||+. ++...+.
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~~~-----------------P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQTN-----------------IDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEESCC-----------------CSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEeccCC-----------------CCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence 235689999865 2211 1111111 112433 378899987667899999986 5554443
Q ss_pred cCCCcccCCCcccEEEEEe-----CCEEEEEcC
Q 013929 363 RLPERANSMNGWGLAFRAC-----GDRLIVIGG 390 (433)
Q Consensus 363 ~lp~~~~~~~~~~~~~~~~-----~~~l~v~GG 390 (433)
..+.+... -.+++.- ++.|||...
T Consensus 249 ~~~~~~~~----p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 249 QAEQGVIG----STAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CGGGTCTT----EEEEEECCSTTTTTEEEEEEC
T ss_pred ecccccCC----ceEEEEecccCCCCEEEEECC
Confidence 33222110 1333332 268998765
No 60
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.85 E-value=0.062 Score=50.30 Aligned_cols=79 Identities=8% Similarity=-0.053 Sum_probs=43.6
Q ss_pred CC-EEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCC-EEEEEcCCCCCCCCeeEEEEeecCCCCC
Q 013929 335 NN-ELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGD-RLIVIGGPKASGEGFIELNSWVPSEGPP 411 (433)
Q Consensus 335 ~~-~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~-~l~v~GG~~~~~~~~~~~~~~~~~~~~~ 411 (433)
++ .+|+.+...+.|.+||..+++++.+..++.......+. ..++. -++ .||+.... ....+.+|+++..+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~-~~i~~spdg~~l~v~~~~-----~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS-GDIHLSPDGKYLYASNRL-----KADGVAIFKVDETNG 294 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE-EEEEECTTSSEEEEEECS-----SSCEEEEEEECTTTC
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc-ccEEECCCCCEEEEECCC-----CCCEEEEEEEcCCCC
Confidence 44 57777766788999999888876665433221110111 22222 344 46655432 013477788875566
Q ss_pred CceEeccc
Q 013929 412 QWNLLARK 419 (433)
Q Consensus 412 ~W~~v~~~ 419 (433)
+++.+..+
T Consensus 295 ~~~~~~~~ 302 (361)
T 3scy_A 295 TLTKVGYQ 302 (361)
T ss_dssp CEEEEEEE
T ss_pred cEEEeeEe
Confidence 66665443
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.85 E-value=0.052 Score=51.80 Aligned_cols=230 Identities=9% Similarity=0.065 Sum_probs=110.8
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCce--ecCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSW--SSGMR 210 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~~ 210 (433)
+|.+......+..||..+.+-...-. .+...-..+..++.+++.|+. ...+.+||..+..- ..+..
T Consensus 148 ~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 215 (401)
T 4aez_A 148 FLSVGLGNGLVDIYDVESQTKLRTMA------GHQARVGCLSWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQG 215 (401)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEEC
T ss_pred EEEEECCCCeEEEEECcCCeEEEEec------CCCCceEEEEECCCEEEEEcC------CCCEEEEecccCcceeeEEcC
Confidence 34444445567788877655432211 111111223345556666654 34688899874331 11111
Q ss_pred CCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE-cCCCCCCCcceeEEEE--CCEEEEEccccCCCC
Q 013929 211 MNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKV-LPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDS 286 (433)
Q Consensus 211 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~ 286 (433)
....-.+++.. ++.+++.|+.+ ..+.+||..+..-.. +.... ..-.+++.. +..+++.||..
T Consensus 216 --~~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~ll~~~~gs---- 281 (401)
T 4aez_A 216 --HSSEVCGLAWRSDGLQLASGGND------NVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLLATGGGT---- 281 (401)
T ss_dssp --CSSCEEEEEECTTSSEEEEEETT------SCEEEEETTCSSEEEEECCCS--SCCCEEEECTTSTTEEEEECCT----
T ss_pred --CCCCeeEEEEcCCCCEEEEEeCC------CeEEEccCCCCCccEEecCCc--ceEEEEEECCCCCCEEEEecCC----
Confidence 11111122222 56677777654 358899998764321 11111 111222332 34566666411
Q ss_pred cccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEE--ecCCCeEEEEeCCCCcEEEecc
Q 013929 287 KVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAA--DYADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 287 ~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~--gg~~~~i~~yd~~~~~W~~v~~ 363 (433)
.-..+..||+.+++-...-..... . ..++. -++..++. |...+.+.+||..+.....+..
T Consensus 282 -~d~~i~i~d~~~~~~~~~~~~~~~--v--------------~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~ 344 (401)
T 4aez_A 282 -MDKQIHFWNAATGARVNTVDAGSQ--V--------------TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVD 344 (401)
T ss_dssp -TTCEEEEEETTTCCEEEEEECSSC--E--------------EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEE
T ss_pred -CCCEEEEEECCCCCEEEEEeCCCc--E--------------EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEE
Confidence 113578899987754322111110 0 01222 24444444 4478899999999887777654
Q ss_pred CCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCce
Q 013929 364 LPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWN 414 (433)
Q Consensus 364 lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~ 414 (433)
++...... .......++++++.||.++ .+.+|++.......+
T Consensus 345 ~~~h~~~v---~~~~~s~dg~~l~s~~~dg------~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 345 IPAHDTRV---LYSALSPDGRILSTAASDE------NLKFWRVYDGDHVKR 386 (401)
T ss_dssp EECCSSCC---CEEEECTTSSEEEEECTTS------EEEEEECCC------
T ss_pred ecCCCCCE---EEEEECCCCCEEEEEeCCC------cEEEEECCCCccccc
Confidence 44332211 1222234677777777532 478888865544444
No 62
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.83 E-value=0.015 Score=53.28 Aligned_cols=212 Identities=9% Similarity=0.013 Sum_probs=108.0
Q ss_pred EeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC-
Q 013929 136 FSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA- 213 (433)
Q Consensus 136 ~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~- 213 (433)
+......++.||+.+..-..+.. +... ..++. -++.+|+..+ +.+++||+.+++++.+...+.
T Consensus 30 ~d~~~~~i~~~d~~~~~~~~~~~-~~~~------~~i~~~~dG~l~v~~~--------~~l~~~d~~~g~~~~~~~~~~~ 94 (297)
T 3g4e_A 30 VDIPAKKVCRWDSFTKQVQRVTM-DAPV------SSVALRQSGGYVATIG--------TKFCALNWKEQSAVVLATVDND 94 (297)
T ss_dssp EETTTTEEEEEETTTCCEEEEEC-SSCE------EEEEEBTTSSEEEEET--------TEEEEEETTTTEEEEEEECCTT
T ss_pred EECCCCEEEEEECCCCcEEEEeC-CCce------EEEEECCCCCEEEEEC--------CeEEEEECCCCcEEEEEecCCC
Confidence 33445678999998876544321 1110 11122 2456665431 358999999998876543321
Q ss_pred -C--cceeeEEEeCCEEEEEccCCCC-----CCcCCceEEEeCCCCCeEEcC-CCCCCCcceeEEEE-CC-EEEEEcccc
Q 013929 214 -P--RCLFGSASLGEIAILAGGSDLE-----GNILSSAEMYNSETQTWKVLP-SMKNPRKMCSGVFM-DG-KFYVIGGIG 282 (433)
Q Consensus 214 -~--r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~yd~~t~~W~~~~-~~p~~r~~~~~~~~-~g-~lyv~GG~~ 282 (433)
+ +.....+.-+++||+..-.... ......++++|+.. +...+. .+. ...+.+.. ++ .+|+.....
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~---~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD---ISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES---BEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc---cccceEEcCCCCEEEEecCCC
Confidence 1 2222222236788774321110 01234688888753 333221 111 11223332 34 578774332
Q ss_pred CCCCcccceEEEEEC--CCCceEe---cCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCC
Q 013929 283 GSDSKVLTCGEEYDL--ETETWTE---IPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 283 ~~~~~~~~~v~~yd~--~t~~W~~---~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
..|++||. .++.... +..++..... +..+++ -+|.||+.....+.|.+||++++
T Consensus 171 -------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~-------------p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 171 -------YSVDAFDYDLQTGQISNRRSVYKLEKEEQI-------------PDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp -------TEEEEEEECTTTCCEEEEEEEEECCGGGCE-------------EEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred -------CcEEEEeccCCCCcccCcEEEEECCCCCCC-------------CCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 45777875 5555421 1111111001 113333 36889998766678999999988
Q ss_pred cEEEeccCCCcccCCCcccEEEEEe---CCEEEEEcCCC
Q 013929 357 LWFTIGRLPERANSMNGWGLAFRAC---GDRLIVIGGPK 392 (433)
Q Consensus 357 ~W~~v~~lp~~~~~~~~~~~~~~~~---~~~l~v~GG~~ 392 (433)
+....-.+|.... .+++.- ++.|||.....
T Consensus 231 ~~~~~i~~p~~~~------t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 KRLQTVKLPVDKT------TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CEEEEEECSSSBE------EEEEEESGGGCEEEEEEBCT
T ss_pred eEEEEEECCCCCc------eEEEEeCCCCCEEEEEcCCc
Confidence 7655545554331 223332 24899987543
No 63
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.78 E-value=0.18 Score=45.23 Aligned_cols=202 Identities=7% Similarity=-0.016 Sum_probs=105.6
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCccee
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLF 218 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~ 218 (433)
...+..||+. .+...++. +... .....++. .++.+|+.... .+.+++||+. +++............+
T Consensus 40 ~~~v~~~~~~-~~~~~~~~-~~~~---~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g~~~~~~~~~~~~~~~ 107 (300)
T 2qc5_A 40 ANKISSLDQS-GRIKEFEV-PTPD---AKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-GGFTEYPLPQPDSGPY 107 (300)
T ss_dssp TTEEEEECTT-SCEEEEEC-SSTT---CCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CCeEEEECCC-CceEEEEC-CCCC---CcceeEEECCCCCEEEEecC------CCeEEEECCC-CCeEEecCCCCCCCCc
Confidence 3568889988 66655432 1110 01112222 24678887532 2358999988 7765432111112223
Q ss_pred eEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCC-CcceeEEE-ECCEEEEEccccCCCCcccceEEEE
Q 013929 219 GSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNP-RKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEY 295 (433)
Q Consensus 219 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~y 295 (433)
.++.. ++++|+.... ...+.+||+. ++..... ++.. ......+. -+|++|+.... ...+.+|
T Consensus 108 ~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-------~~~i~~~ 172 (300)
T 2qc5_A 108 GITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ-------NNSIGRI 172 (300)
T ss_dssp EEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-------TTEEEEE
T ss_pred cceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-------CCeEEEE
Confidence 44433 6788887421 2468889988 6655432 1211 11222332 25778876422 1357889
Q ss_pred ECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcc
Q 013929 296 DLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGW 374 (433)
Q Consensus 296 d~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~ 374 (433)
|+ +++...+. .+...... ..++.. ++.||+.....+.|.+||+ ++++..+. ++.....
T Consensus 173 ~~-~g~~~~~~-~~~~~~~~-------------~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~~---- 231 (300)
T 2qc5_A 173 TN-TGKLEEYP-LPTNAAAP-------------VGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD-IPTPNAR---- 231 (300)
T ss_dssp CT-TCCEEEEE-CSSTTCCE-------------EEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSSTTCC----
T ss_pred CC-CCcEEEee-CCCCCCCc-------------ceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE-CCCCCCC----
Confidence 98 66666542 11111110 123332 5789988766678999999 66666553 2211110
Q ss_pred cEEEEE-eCCEEEEEc
Q 013929 375 GLAFRA-CGDRLIVIG 389 (433)
Q Consensus 375 ~~~~~~-~~~~l~v~G 389 (433)
-.+++. -+++||+..
T Consensus 232 ~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 232 PHAITAGKNSEIWFTE 247 (300)
T ss_dssp EEEEEECSTTCEEEEE
T ss_pred ceEEEECCCCCEEEec
Confidence 123333 356788876
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.77 E-value=0.036 Score=53.23 Aligned_cols=186 Identities=11% Similarity=0.027 Sum_probs=96.5
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcce
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRCL 217 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~ 217 (433)
..+..||+.+.+.....+.+.... +...-..++. ++.+|+.++. ...+.+||+.+++... +.. .....
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~~~~~--~~~~~ 214 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKK-KLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKATVDL--TGKWS 214 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHT-TCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEEEEEC--SSSSE
T ss_pred CeEEEEECCCCeEeeecCcccccc-cCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEEEEcC--CCCCe
Confidence 458889998877665433211111 1011111222 6788887753 3468999998765432 221 11111
Q ss_pred eeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCc-ccceEE
Q 013929 218 FGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSK-VLTCGE 293 (433)
Q Consensus 218 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~-~~~~v~ 293 (433)
..++.. +..+|+.++.+ ..+.+||+.+.+....-. .......++. -+++.+++++....... .-..+.
T Consensus 215 ~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 215 KILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTD--KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp EEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECC--CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred eEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEec--CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 222322 44677776433 368999998876543322 1222222222 24545455444311111 134688
Q ss_pred EEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-C-CEEEEEecCCCeEEEEeCCCCcEE
Q 013929 294 EYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-N-NELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 294 ~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~-~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
+||+.+++-......+.. . ..++.. + +.+|+.++..+.+.+||..+++-.
T Consensus 287 ~~d~~~~~~~~~~~~~~~--~--------------~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 287 IYSMDKEKLIDTIGPPGN--K--------------RHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp EEETTTTEEEEEEEEEEC--E--------------EEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEECCCCcEEeeccCCCC--c--------------ceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 999988754332111110 0 012222 3 378888888899999999877543
No 65
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.77 E-value=0.16 Score=44.99 Aligned_cols=172 Identities=13% Similarity=-0.034 Sum_probs=89.5
Q ss_pred CCEEEE-ECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLV-FGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv-~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.+|+ .... .+.+.+||+.+........... .....++.. +++|||... ...+.+||+.+...
T Consensus 34 ~g~l~v~~~~~------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 34 AGNVYVTSEGM------YGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQ 99 (270)
T ss_dssp TCCEEEEECSS------SCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-------TTEEEEECTTCSCC
T ss_pred CCCEEEEccCC------CCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-------CCEEEEEeCCCceE
Confidence 567888 5322 2458889987776544332111 112333333 567888753 24688999988765
Q ss_pred EEcCCCCCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 254 KVLPSMKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
..+..... ......++. +|++|+..... ..+.+||..+.............. ..++
T Consensus 100 ~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~p---------------~~i~ 156 (270)
T 1rwi_B 100 TVLPFDGL-NYPEGLAVDTQGAVYVADRGN-------NRVVKLAAGSKTQTVLPFTGLNDP---------------DGVA 156 (270)
T ss_dssp EECCCCSC-SSEEEEEECTTCCEEEEEGGG-------TEEEEECTTCCSCEECCCCSCCSC---------------CCEE
T ss_pred eeeecCCc-CCCcceEECCCCCEEEEECCC-------CEEEEEECCCceeEeeccccCCCc---------------eeEE
Confidence 54432111 112233332 67888874332 357888877665443321110011 1344
Q ss_pred EE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEe-CCEEEEEcC
Q 013929 333 VV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRAC-GDRLIVIGG 390 (433)
Q Consensus 333 ~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~-~~~l~v~GG 390 (433)
.. ++++|+.....+.|.+||+.+..-.......... -..++.. +|+||+...
T Consensus 157 ~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~------p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITA------PWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCS------EEEEEECTTCCEEEEET
T ss_pred EeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCC------ceEEEECCCCCEEEEEC
Confidence 43 5789998766789999999887644332111111 1233333 458888764
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.75 E-value=0.086 Score=48.38 Aligned_cols=205 Identities=12% Similarity=0.099 Sum_probs=95.7
Q ss_pred CEEEEECCCCCCcccceeEEEEEcC--CCceecCCCCCCCcceeeEEEe-CC-EEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 177 TELLVFGRELTAHHISHVIYRYSIL--TNSWSSGMRMNAPRCLFGSASL-GE-IAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~--t~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
..||+.+.. ...+.+|+.. +++++.+..++.......++.. ++ .||+.+.. -..+.+||...+.
T Consensus 50 ~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~ 117 (343)
T 1ri6_A 50 RYLYVGVRP------EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGL 117 (343)
T ss_dssp SEEEEEETT------TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTE
T ss_pred CEEEEeecC------CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCc
Confidence 356665532 1357777765 7777655433322212222222 33 56666432 2357788874221
Q ss_pred -eEEcCCCCCCCcceeEEE-ECC-EEEEEccccCCCCcccceEEEEECCC-CceEecC--CCCCCCCCCCCCCcCCCCcC
Q 013929 253 -WKVLPSMKNPRKMCSGVF-MDG-KFYVIGGIGGSDSKVLTCGEEYDLET-ETWTEIP--NMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 253 -W~~~~~~p~~r~~~~~~~-~~g-~lyv~GG~~~~~~~~~~~v~~yd~~t-~~W~~~~--~~p~~r~~~~~~~~~~~~~~ 326 (433)
.+.+...+.......++. -++ .+|+.+..+ ..+.+||+.+ ++...+. .........
T Consensus 118 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~----------- 179 (343)
T 1ri6_A 118 PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-------DRICLFTVSDDGHLVAQDPAEVTTVEGAG----------- 179 (343)
T ss_dssp EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-------TEEEEEEECTTSCEEEEEEEEEECSTTCC-----------
T ss_pred cccccccccCCCCceEEEECCCCCEEEEecCCC-------CEEEEEEecCCCceeeecccccccCCCCC-----------
Confidence 222222221111222222 234 566654232 3578899887 6665332 111110010
Q ss_pred CCCEEEEE--CC-EEEEEecCCCeEEEEeCC--CCcEEEe---ccCCCcccCCCcccEEEEEe--CCEEEEEcCCCCCCC
Q 013929 327 APPLVAVV--NN-ELYAADYADMEVRKYDKE--RRLWFTI---GRLPERANSMNGWGLAFRAC--GDRLIVIGGPKASGE 396 (433)
Q Consensus 327 ~~~~~~~~--~~-~ly~~gg~~~~i~~yd~~--~~~W~~v---~~lp~~~~~~~~~~~~~~~~--~~~l~v~GG~~~~~~ 396 (433)
+..+.+ ++ .+|+.+...+.+.+||.. ++++..+ ..++....... ....++.. +..||+.+...
T Consensus 180 --~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~i~~s~dg~~l~v~~~~~---- 252 (343)
T 1ri6_A 180 --PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR-WAADIHITPDGRHLYACDRTA---- 252 (343)
T ss_dssp --EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCC-CEEEEEECTTSSEEEEEETTT----
T ss_pred --cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccC-CccceEECCCCCEEEEEecCC----
Confidence 112222 34 577777677889999984 4554433 33443211000 11223332 33676665321
Q ss_pred CeeEEEEeecCCCCCCceEecccC
Q 013929 397 GFIELNSWVPSEGPPQWNLLARKQ 420 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~W~~v~~~p 420 (433)
..+.+|+++....+++.+..++
T Consensus 253 --~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 253 --SLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp --TEEEEEEECTTSCCEEEEEEEE
T ss_pred --CEEEEEEEcCCCCceEEeeeec
Confidence 2467787765455666664443
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.74 E-value=0.023 Score=52.98 Aligned_cols=189 Identities=12% Similarity=0.058 Sum_probs=91.2
Q ss_pred eEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce-eeE
Q 013929 142 EWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL-FGS 220 (433)
Q Consensus 142 ~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~ 220 (433)
.++.+|+.+.++..+......... ......-++++|+.+.. .....+++||..+++++.+......... ..+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~----~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKE----DDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEE----TTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEec----CCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 366678888877654321111100 01112236777777532 0235689999988887665432111111 122
Q ss_pred E-EeCC-EEEEEccCCCCCCcCCceEEEeCC-CCCeEEcCCC------CCCCc----ceeEEE-ECCEEEEEccccCCCC
Q 013929 221 A-SLGE-IAILAGGSDLEGNILSSAEMYNSE-TQTWKVLPSM------KNPRK----MCSGVF-MDGKFYVIGGIGGSDS 286 (433)
Q Consensus 221 ~-~~~~-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~------p~~r~----~~~~~~-~~g~lyv~GG~~~~~~ 286 (433)
+ .-++ .||+.+.. -..+.+||.. .++.+.+... |.+|. .+.++. -+|++|+.+...
T Consensus 92 a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~---- 161 (347)
T 3hfq_A 92 AVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS---- 161 (347)
T ss_dssp EEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT----
T ss_pred EECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC----
Confidence 2 2244 57776421 2457777774 3333332211 11111 112222 367777654322
Q ss_pred cccceEEEEECC-CCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECC-EEEEEecCCCeEEEEeCC--CCcEEEe
Q 013929 287 KVLTCGEEYDLE-TETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNN-ELYAADYADMEVRKYDKE--RRLWFTI 361 (433)
Q Consensus 287 ~~~~~v~~yd~~-t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~-~ly~~gg~~~~i~~yd~~--~~~W~~v 361 (433)
..+.+||+. +++...+.......... +..++. -++ .+|+.+...+.+.+|+.. ++++..+
T Consensus 162 ---~~v~~~~~~~~g~~~~~~~~~~~~g~~------------p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 162 ---DKVYVYNVSDAGQLSEQSVLTMEAGFG------------PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp ---TEEEEEEECTTSCEEEEEEEECCTTCC------------EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred ---CEEEEEEECCCCcEEEeeeEEcCCCCC------------CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe
Confidence 357889887 56555433211111100 001222 245 488877666777777655 5776655
Q ss_pred c
Q 013929 362 G 362 (433)
Q Consensus 362 ~ 362 (433)
.
T Consensus 227 ~ 227 (347)
T 3hfq_A 227 G 227 (347)
T ss_dssp E
T ss_pred e
Confidence 4
No 68
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.73 E-value=0.2 Score=44.98 Aligned_cols=201 Identities=6% Similarity=-0.028 Sum_probs=103.8
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC-Ccce
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA-PRCL 217 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~r~~ 217 (433)
...+..||+. .++..+....... ....++.. ++.+|+.... .+.+++||+. ++..... ++. ....
T Consensus 82 ~~~v~~~d~~-g~~~~~~~~~~~~----~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~~~~~ 148 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPLPQPDS----GPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNKGSYP 148 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTC----CEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSSTTCCE
T ss_pred CCeEEEECCC-CCeEEecCCCCCC----CCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCCCCCc
Confidence 3568889988 6665442111111 11122222 5788887532 2358899987 6654332 121 1222
Q ss_pred eeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEE
Q 013929 218 FGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEE 294 (433)
Q Consensus 218 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~ 294 (433)
..++. -+++||+... ....+++||+ +++...+.. +..........+ +|.+|+.... ...+.+
T Consensus 149 ~~i~~d~~g~l~v~~~------~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~-------~~~i~~ 213 (300)
T 2qc5_A 149 AFITLGSDNALWFTEN------QNNSIGRITN-TGKLEEYPL-PTNAAAPVGITSGNDGALWFVEIM-------GNKIGR 213 (300)
T ss_dssp EEEEECTTSSEEEEET------TTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETT-------TTEEEE
T ss_pred eeEEECCCCCEEEEec------CCCeEEEECC-CCcEEEeeC-CCCCCCcceEEECCCCCEEEEccC-------CCEEEE
Confidence 33333 2567888642 1246889998 666665421 222222222333 5788886422 235788
Q ss_pred EECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCc
Q 013929 295 YDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNG 373 (433)
Q Consensus 295 yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~ 373 (433)
||+ ++.+.... .+...... .+++.. +|+||+.....+.|.+||+ +++...+. ++......
T Consensus 214 ~~~-~g~~~~~~-~~~~~~~~-------------~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~~~-- 274 (300)
T 2qc5_A 214 ITT-TGEISEYD-IPTPNARP-------------HAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQ-LQTENAEP-- 274 (300)
T ss_dssp ECT-TCCEEEEE-CSSTTCCE-------------EEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEE-CCSTTCCC--
T ss_pred EcC-CCcEEEEE-CCCCCCCc-------------eEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEE-CCccCCcc--
Confidence 998 66665542 12111110 123332 5789988766789999999 56665543 22111111
Q ss_pred ccEEEEE-eCCEEEEEc
Q 013929 374 WGLAFRA-CGDRLIVIG 389 (433)
Q Consensus 374 ~~~~~~~-~~~~l~v~G 389 (433)
.+++. -+|+||+.+
T Consensus 275 --~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 275 --HGITFGKDGSVWFAL 289 (300)
T ss_dssp --CCEEECTTSCEEEEC
T ss_pred --ceeEeCCCCCEEEEc
Confidence 22333 357888765
No 69
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.73 E-value=0.056 Score=52.12 Aligned_cols=228 Identities=6% Similarity=-0.128 Sum_probs=112.8
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeE
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGS 220 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 220 (433)
..++.+|.....-..+..-.... .......+++.+++++... ....++++|..+++...+...+. .....
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v-----~~~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg~~~~l~~~~~--~~~~~ 228 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPL-----MSPAWSPDGSKLAYVTFES---GRSALVIQTLANGAVRQVASFPR--HNGAP 228 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCE-----EEEEECTTSSEEEEEECTT---SSCEEEEEETTTCCEEEEECCSS--CEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcc-----eeeEEcCCCCEEEEEEecC---CCcEEEEEECCCCcEEEeecCCC--cccCE
Confidence 46778887654433332111100 0001112444444443311 12468999999988766543322 11222
Q ss_pred EEe-CC-EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEEC
Q 013929 221 ASL-GE-IAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 221 ~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
+.. ++ +|++.+..++ ...++++|+.++..+.+..... .....+. -+|+..++++..+ ....++.+|+
T Consensus 229 ~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdg~~l~~~s~~~----g~~~i~~~d~ 298 (415)
T 2hqs_A 229 AFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS--NNTEPTWFPDSQNLAFTSDQA----GRPQVYKVNI 298 (415)
T ss_dssp EECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS--CEEEEEECTTSSEEEEEECTT----SSCEEEEEET
T ss_pred EEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC--cccceEECCCCCEEEEEECCC----CCcEEEEEEC
Confidence 222 44 4555544332 3569999999988776654321 1112222 2565444443221 1246888999
Q ss_pred CCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEec-C--CCeEEEEeCCCCcEEEeccCCCcccCCCc
Q 013929 298 ETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADY-A--DMEVRKYDKERRLWFTIGRLPERANSMNG 373 (433)
Q Consensus 298 ~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg-~--~~~i~~yd~~~~~W~~v~~lp~~~~~~~~ 373 (433)
.++.-..+..... .. ..++ .-+++.++++. . ...|+.+|..+++...+..-. ..
T Consensus 299 ~~~~~~~l~~~~~--~~--------------~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~----- 356 (415)
T 2hqs_A 299 NGGAPQRITWEGS--QN--------------QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LD----- 356 (415)
T ss_dssp TSSCCEECCCSSS--EE--------------EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SC-----
T ss_pred CCCCEEEEecCCC--cc--------------cCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-Cc-----
Confidence 8876555432110 00 0111 12454444433 2 358999999999887664322 11
Q ss_pred ccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEe
Q 013929 374 WGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLL 416 (433)
Q Consensus 374 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v 416 (433)
.......+++.+++++... ....+..|+.+ ....+.+
T Consensus 357 -~~~~~spdg~~l~~~s~~~---~~~~l~~~d~~--g~~~~~l 393 (415)
T 2hqs_A 357 -ETPSLAPNGTMVIYSSSQG---MGSVLNLVSTD--GRFKARL 393 (415)
T ss_dssp -EEEEECTTSSEEEEEEEET---TEEEEEEEETT--SCCEEEC
T ss_pred -CCeEEcCCCCEEEEEEcCC---CccEEEEEECC--CCcEEEe
Confidence 1222234667666665432 23456666664 3444444
No 70
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.73 E-value=0.089 Score=55.25 Aligned_cols=181 Identities=6% Similarity=0.053 Sum_probs=102.6
Q ss_pred eccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC---C
Q 013929 138 CHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN---A 213 (433)
Q Consensus 138 ~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~ 213 (433)
+...-+..||+.++++..+.....+.. .-.+++.. ++.|++... .-+++||+.+++|+.....+ .
T Consensus 424 t~~~Gl~~~~~~~~~~~~~~~~~~~~~---~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 424 TYLGNISYYNTRLKKFQIIELEKNELL---DVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQL 492 (781)
T ss_dssp ETTEEEEEECSSSCEEEECCSTTTCCC---CEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSC
T ss_pred eccCCEEEEcCCCCcEEEeccCCCCCC---eEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCccccc
Confidence 333568889999888887753211100 00111222 467777531 34899999999987654322 1
Q ss_pred -CcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCC-CCcceeEEEE--CCEEEEEccccCCCCcc
Q 013929 214 -PRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKN-PRKMCSGVFM--DGKFYVIGGIGGSDSKV 288 (433)
Q Consensus 214 -~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~r~~~~~~~~--~g~lyv~GG~~~~~~~~ 288 (433)
.....+++. -++.|++.. . ...+++||+.+++++....... +-........ +|.|++...
T Consensus 493 ~~~~i~~i~~d~~g~lWigt-~------~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-------- 557 (781)
T 3v9f_A 493 LENFVRSIAQDSEGRFWIGT-F------GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-------- 557 (781)
T ss_dssp SCSCEEEEEECTTCCEEEEE-S------SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--------
T ss_pred ccceeEEEEEcCCCCEEEEE-c------CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--------
Confidence 111122222 256777652 1 1348899999998887653111 1111112222 567776532
Q ss_pred cceE-EEEECCCCceEecCC---CCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEec
Q 013929 289 LTCG-EEYDLETETWTEIPN---MSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 289 ~~~v-~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~ 362 (433)
..+ ..||+.+++++.... ++..... +++.. +|.|++.+ .+.+.+||+++++++...
T Consensus 558 -~Glv~~~d~~~~~~~~~~~~~gl~~~~i~---------------~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 558 -EGLVCFPSARNFDYQVFQRKEGLPNTHIR---------------AISEDKNGNIWAST--NTGISCYITSKKCFYTYD 618 (781)
T ss_dssp -TEEEEESCTTTCCCEEECGGGTCSCCCCC---------------EEEECSSSCEEEEC--SSCEEEEETTTTEEEEEC
T ss_pred -CCceEEECCCCCcEEEccccCCCCCceEE---------------EEEECCCCCEEEEc--CCceEEEECCCCceEEec
Confidence 135 789999988877642 3322211 34443 57887764 456999999999988775
No 71
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.67 E-value=0.31 Score=46.41 Aligned_cols=206 Identities=14% Similarity=0.054 Sum_probs=115.3
Q ss_pred ccEEEEeeccceEEEEecCCCcEEeCCC-CCCccccccCCceEEE--ECCEEEEECCCCCCcccceeEEEEEcCCCceec
Q 013929 131 EHWVYFSCHLLEWEAFDPIRRRWMHLPR-MTSNECFMCSDKESLA--VGTELLVFGRELTAHHISHVIYRYSILTNSWSS 207 (433)
Q Consensus 131 ~~~l~~~~~~~~~~~yd~~~~~W~~l~~-~p~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 207 (433)
+++|++.. .+.+..+|+.......+.. +..+ .+++. .++.||+.-- ..+.++++++.....+.
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~-------~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENA-------IALDFHHRRELVFWSDV------TLDRILRANLNGSNVEE 152 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECSCSCE-------EEEEEETTTTEEEEEET------TTTEEEEEETTSCCEEE
T ss_pred cceeEeec-CccceeeccCCCcEEEEecCCCcc-------EEEEEecCCCeEEEEeC------CCCcEEEEecCCCCcEE
Confidence 45666553 4678888888766554432 1111 12222 2578988742 23468999998776554
Q ss_pred CC--CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccc
Q 013929 208 GM--RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGI 281 (433)
Q Consensus 208 ~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~ 281 (433)
+. .+..| ..+++ .++.||+.-. ....++++++....-+.+..-.. ..-.+.++- ++.||+.--.
T Consensus 153 ~~~~~~~~p---~glavd~~~g~lY~~d~------~~~~I~~~~~dg~~~~~l~~~~l-~~P~giavdp~~g~ly~td~~ 222 (386)
T 3v65_B 153 VVSTGLESP---GGLAVDWVHDKLYWTDS------GTSRIEVANLDGAHRKVLLWQSL-EKPRAIALHPMEGTIYWTDWG 222 (386)
T ss_dssp EECSSCSCC---CCEEEETTTTEEEEEET------TTTEEEECBTTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEECS
T ss_pred EEeCCCCCc---cEEEEEeCCCeEEEEcC------CCCeEEEEeCCCCceEEeecCCC-CCCcEEEEEcCCCeEEEeccC
Confidence 32 22222 23333 3789999842 23568888887654333321110 111234443 6889987311
Q ss_pred cCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 282 GGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 282 ~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
....|+++++....-+.+... ... ++.++++. +++||+.....+.|+++|.....=+
T Consensus 223 ------~~~~I~r~~~dG~~~~~~~~~--~~~-------------~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (386)
T 3v65_B 223 ------NTPRIEASSMDGSGRRIIADT--HLF-------------WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 281 (386)
T ss_dssp ------SSCEEEEEETTSCSCEEEECS--SCS-------------CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred ------CCCEEEEEeCCCCCcEEEEEC--CCC-------------CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence 135689999875433332110 000 11245553 7899999888889999998764433
Q ss_pred Eec--cCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 360 TIG--RLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 360 ~v~--~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
.+. .++.+ .+++..++.||+.-
T Consensus 282 ~~~~~~~~~P--------~giav~~~~ly~td 305 (386)
T 3v65_B 282 AVISQGLPHP--------FAITVFEDSLYWTD 305 (386)
T ss_dssp EEECSSCSSE--------EEEEEETTEEEEEE
T ss_pred EEEECCCCCc--------eEEEEECCEEEEee
Confidence 332 22222 34555788999886
No 72
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.65 E-value=0.15 Score=46.23 Aligned_cols=200 Identities=10% Similarity=0.100 Sum_probs=95.5
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--C--CEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--G--EIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
+.+++.|+. ...+.+||..+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+..
T Consensus 67 g~~l~s~s~------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~ 134 (297)
T 2pm7_B 67 GTILASCSY------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENG 134 (297)
T ss_dssp CSEEEEEET------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSS
T ss_pred CCEEEEEcC------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCC
Confidence 456666654 34588999998887655433221112222222 1 4566666644 346777776542
Q ss_pred -eEEcCCCCCCCcceeEEEE---------------CCEEEEEccccCCCCcccceEEEEECCCCc--eEecCCCCCCCCC
Q 013929 253 -WKVLPSMKNPRKMCSGVFM---------------DGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEIPNMSPARGG 314 (433)
Q Consensus 253 -W~~~~~~p~~r~~~~~~~~---------------~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~ 314 (433)
+... .+.........+.. ++++++.|+.++ .+..||..+.. |.....+......
T Consensus 135 ~~~~~-~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-------~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 135 TTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-------LVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp CBCCE-EEECCSSCEEEEEECCCC------------CCEEEEEETTS-------CEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred ceeee-eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-------cEEEEEEcCCCceEEEEEEecCCCCc
Confidence 2100 00000000011111 245677777652 35667765533 5433222211111
Q ss_pred CCCCCcCCCCcCCCCEEEEE-C---CEEEEEecCCCeEEEEeCCCC--cEEEeccCCCcccCCCcccEEEE-EeCCEEEE
Q 013929 315 AARGTEMPASAEAPPLVAVV-N---NELYAADYADMEVRKYDKERR--LWFTIGRLPERANSMNGWGLAFR-ACGDRLIV 387 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~---~~ly~~gg~~~~i~~yd~~~~--~W~~v~~lp~~~~~~~~~~~~~~-~~~~~l~v 387 (433)
. .+++.. + +.+++.|+..+.|.+||..+. .|....-.... +...-.+++ ..++++++
T Consensus 207 V-------------~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 207 V-------------RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEK---FPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp E-------------EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC---CSSCEEEEEECSSSCCEE
T ss_pred e-------------EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeeccc---CCCcEEEEEECCCCCEEE
Confidence 0 012222 2 477778888889999988763 46432110000 001112222 23677777
Q ss_pred EcCCCCCCCCeeEEEEeecCCCCCCceEeccc
Q 013929 388 IGGPKASGEGFIELNSWVPSEGPPQWNLLARK 419 (433)
Q Consensus 388 ~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~ 419 (433)
.||.++ .+.+|+... ...|..+..+
T Consensus 271 s~~~D~------~v~lw~~~~-~g~w~~~~~~ 295 (297)
T 2pm7_B 271 LSGGDN------KVTLWKENL-EGKWEPAGEV 295 (297)
T ss_dssp EEETTS------CEEEEEECT-TSCEEEC---
T ss_pred EEcCCC------cEEEEEECC-CCcEEecccc
Confidence 777633 367888753 4679887665
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.63 E-value=0.17 Score=46.71 Aligned_cols=216 Identities=12% Similarity=0.111 Sum_probs=105.0
Q ss_pred eeccceEEEEecCCCcEEe-CCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCc
Q 013929 137 SCHLLEWEAFDPIRRRWMH-LPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPR 215 (433)
Q Consensus 137 ~~~~~~~~~yd~~~~~W~~-l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r 215 (433)
......+..+|..+.+-.. +..-+... .......++..++.|+. ...+.+||..+++-...-... ..
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~-----~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~~~~~-~~ 165 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDA-----WTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYSLDTR-GK 165 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCC-----CCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEEEECS-SS
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccE-----EEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEEecCC-Cc
Confidence 3344567778877654322 11111110 00111224555666653 335788888766532110001 11
Q ss_pred ceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcc-eeEEE-ECCEEEEEccccCCCCcccceE
Q 013929 216 CLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKM-CSGVF-MDGKFYVIGGIGGSDSKVLTCG 292 (433)
Q Consensus 216 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~-~~g~lyv~GG~~~~~~~~~~~v 292 (433)
...+++. -+++.++.|+.+ ..+.+||..+++-.. .+...... ..++. -++++++.|+.++ .+
T Consensus 166 ~v~~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~--~~~~h~~~v~~l~~spd~~~l~s~s~dg-------~i 230 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAID------GIINIFDIATGKLLH--TLEGHAMPIRSLTFSPDSQLLVTASDDG-------YI 230 (321)
T ss_dssp CEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEE--EECCCSSCCCEEEECTTSCEEEEECTTS-------CE
T ss_pred eEEEEEECCCCCEEEEEcCC------CeEEEEECCCCcEEE--EEcccCCceeEEEEcCCCCEEEEEcCCC-------eE
Confidence 1112222 256667777654 348889998875322 11111111 12222 2677777777652 47
Q ss_pred EEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCC
Q 013929 293 EEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSM 371 (433)
Q Consensus 293 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~ 371 (433)
.+||+.+...... +....... ..++. -++..++.|+..+.|.+||..+++-.. .+.....
T Consensus 231 ~iwd~~~~~~~~~--~~~h~~~v-------------~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~--~~~~h~~-- 291 (321)
T 3ow8_A 231 KIYDVQHANLAGT--LSGHASWV-------------LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH--TFFDHQD-- 291 (321)
T ss_dssp EEEETTTCCEEEE--ECCCSSCE-------------EEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--EECCCSS--
T ss_pred EEEECCCcceeEE--EcCCCCce-------------EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE--EEcCCCC--
Confidence 8899887654321 11100110 01222 257777788888999999998765322 2222111
Q ss_pred CcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 372 NGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 372 ~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
.-.+++. .+++.++.||.++ .+.+|+.
T Consensus 292 --~v~~v~~s~~g~~l~s~~~d~------~i~vwd~ 319 (321)
T 3ow8_A 292 --QVWGVKYNGNGSKIVSVGDDQ------EIHIYDC 319 (321)
T ss_dssp --CEEEEEECTTSSEEEEEETTC------CEEEEEC
T ss_pred --cEEEEEECCCCCEEEEEeCCC------eEEEEeC
Confidence 1123333 3566677776533 2666664
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.041 Score=57.65 Aligned_cols=241 Identities=9% Similarity=0.077 Sum_probs=119.6
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--C--CEEEEECCCCCCcccceeEEEEEcCCCceecC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--G--TELLVFGRELTAHHISHVIYRYSILTNSWSSG 208 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 208 (433)
++........+..||....++..+..+.... ..-..+.. + +..++.|+. ...+.+||..+++|..+
T Consensus 23 ~latg~~dg~I~vwd~~~~~~~~~~~l~~h~----~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENGRWSQI 92 (753)
T ss_dssp CEEEEETTTEEEEEEEETTEEEEEEEECCCS----SCEEEEEECCTTSCSEEEEEET------TSCEEEEEEETTEEEEE
T ss_pred eEEEEECCCcEEEEecCCCCCccceeccCCc----CceEEEEecCCCCCCEEEEEeC------CCeEEEEECCCCccccc
Confidence 3334444456777887766665544333211 11112222 2 556666654 23588999999887655
Q ss_pred CCCCCCcceeeEEEe--C--CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEE-EE------------
Q 013929 209 MRMNAPRCLFGSASL--G--EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGV-FM------------ 271 (433)
Q Consensus 209 ~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~-~~------------ 271 (433)
..+.........+.+ + +.+++.|+.+ ..+.+||..+..-.....+.........+ ..
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 443322222223333 3 5677777654 35788888765211100000011111111 11
Q ss_pred --CCEEEEEccccCCCCcccceEEEEECCCC--ceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-EC---CEEEEEec
Q 013929 272 --DGKFYVIGGIGGSDSKVLTCGEEYDLETE--TWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VN---NELYAADY 343 (433)
Q Consensus 272 --~g~lyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~---~~ly~~gg 343 (433)
++.+++.|+.++ .+.+||..+. .+..+..+....... .+++. -+ +.+++.|+
T Consensus 167 ~~d~~~l~sgs~dg-------~I~iwd~~~~~~~~~~~~~~~~h~~~V-------------~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 167 TKESRKFVTGGADN-------LVKIWKYNSDAQTYVLESTLEGHSDWV-------------RDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CGGGCCEEEEETTS-------CEEEEEEETTTTEEEEEEEECCCSSCE-------------EEEEECCCCSSSEEEEEEE
T ss_pred CCCCCEEEEEECCC-------eEEEEeccCCcccceeeeeecCCCCcE-------------EEEEeccCCCCCCEEEEEe
Confidence 366777777653 3677777654 333332222111110 01222 23 78888888
Q ss_pred CCCeEEEEeCCCCc--EEE-eccCCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEeccc
Q 013929 344 ADMEVRKYDKERRL--WFT-IGRLPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLLARK 419 (433)
Q Consensus 344 ~~~~i~~yd~~~~~--W~~-v~~lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v~~~ 419 (433)
..+.|.+||..++. +.. +........ .-.+++ ..++++++.||.++ .+.+|+++. ...|.....+
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~----~v~~l~~spdg~~l~s~s~Dg------~I~vwd~~~-~~~~~~~~~~ 295 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPD----VLWRASWSLSGNVLALSGGDN------KVTLWKENL-EGKWEPAGEV 295 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCBSSSSCCSS----CCCCEEECTTTCCEEEECSSS------CEECCBCCS-SSCCBCCCCB
T ss_pred cCCEEEEecCCCCCCcceeEEeccCCCCC----ceEEEEEcCCCCEEEEEcCCC------EEEEEecCC-CCCccccccc
Confidence 88999999988753 111 111111111 011222 34677777777633 277888763 4567766544
Q ss_pred C
Q 013929 420 Q 420 (433)
Q Consensus 420 p 420 (433)
.
T Consensus 296 ~ 296 (753)
T 3jro_A 296 H 296 (753)
T ss_dssp C
T ss_pred c
Confidence 3
No 75
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.56 E-value=0.14 Score=45.62 Aligned_cols=185 Identities=14% Similarity=0.011 Sum_probs=94.5
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCC-CceecCCCCCCCcc-ee
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILT-NSWSSGMRMNAPRC-LF 218 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~r~-~~ 218 (433)
..++.+|+.+.+...+...+... .......+++.+++++. ..+++||..+ ++...+...+.... ..
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v-----~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELF-----EAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPSPEKVDTGFATICNND 89 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCC-----EEEEECTTSSEEEEEET-------TEEEEEESSSCCSCEECCCTTCCCBCSC
T ss_pred eeEEEEeCCCCceeeeccCCcce-----EeeEECCCCCEEEEEcC-------CeEEEEeCCCCCCceEeccccccccccc
Confidence 45777888877765543322111 00111224555555432 3689999998 87766543332111 11
Q ss_pred eEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCE-EEEEccccCCCCcccceEEEEE
Q 013929 219 GSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGK-FYVIGGIGGSDSKVLTCGEEYD 296 (433)
Q Consensus 219 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~-lyv~GG~~~~~~~~~~~v~~yd 296 (433)
....-+++.+++++.... ....++.+|..+..-+.+..... ....... +++ |++.++.++ ...++.+|
T Consensus 90 ~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~-----~~~l~~~~ 159 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ-----VFDIYSMD 159 (297)
T ss_dssp CEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT-----EEEEEEEE
T ss_pred eEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC-----ceEEEEEE
Confidence 222235555555553322 24678999988877665543321 2222222 454 444544331 23567777
Q ss_pred CCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCE-EEEEec--CCCeEEEEeCCCCcEEEecc
Q 013929 297 LETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNE-LYAADY--ADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 297 ~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~-ly~~gg--~~~~i~~yd~~~~~W~~v~~ 363 (433)
..+.....+........ .+.. -+++ |++.+. ....++.++..++....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~----------------~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRND----------------GPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp TTTCCEEECCCSSSCEE----------------EEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred CCCCcceEcccCCCccc----------------cceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 88777766543221111 1222 2454 444442 23567777877777766643
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.55 E-value=0.16 Score=48.37 Aligned_cols=183 Identities=12% Similarity=0.092 Sum_probs=94.4
Q ss_pred EEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC
Q 013929 135 YFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN 212 (433)
Q Consensus 135 ~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p 212 (433)
+.......+..||..+.+........... .-..+.. ++.+++.|+. ...+.+||..+++....-.
T Consensus 107 ~~~~~d~~v~lw~~~~~~~~~~~~~~~~~-----~v~~v~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~-- 173 (401)
T 4aez_A 107 VAVALERNVYVWNADSGSVSALAETDEST-----YVASVKWSHDGSFLSVGLG------NGLVDIYDVESQTKLRTMA-- 173 (401)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCTTC-----CEEEEEECTTSSEEEEEET------TSCEEEEETTTCCEEEEEC--
T ss_pred EEEECCCeEEEeeCCCCcEeEeeecCCCC-----CEEEEEECCCCCEEEEECC------CCeEEEEECcCCeEEEEec--
Confidence 33344567888998887765543332111 1111222 4556666643 2358899988776432211
Q ss_pred CCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccc
Q 013929 213 APRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLT 290 (433)
Q Consensus 213 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~ 290 (433)
...........++.+++.|+.+ ..+.+||..+..-.. ..+......-..+.+ ++.+++.|+.++
T Consensus 174 ~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~------- 239 (401)
T 4aez_A 174 GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQI-GTLQGHSSEVCGLAWRSDGLQLASGGNDN------- 239 (401)
T ss_dssp CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTS-------
T ss_pred CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCccee-eEEcCCCCCeeEEEEcCCCCEEEEEeCCC-------
Confidence 1112223333456666776644 458888887432111 011111111122222 677777777652
Q ss_pred eEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEec--CCCeEEEEeCCCCcEEE
Q 013929 291 CGEEYDLETETWTE-IPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADY--ADMEVRKYDKERRLWFT 360 (433)
Q Consensus 291 ~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg--~~~~i~~yd~~~~~W~~ 360 (433)
.+.+||+.+..-.. +...... - .+++.. +..+++.|+ ..+.+..||..+++-..
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~--v--------------~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAA--V--------------KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSC--C--------------CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred eEEEccCCCCCccEEecCCcce--E--------------EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 47889998754322 1111111 1 123333 346777764 67899999998876433
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.53 E-value=0.2 Score=46.56 Aligned_cols=70 Identities=14% Similarity=-0.005 Sum_probs=41.8
Q ss_pred CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE-EEECCEEEEEecCCCeEEE
Q 013929 272 DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV-AVVNNELYAADYADMEVRK 350 (433)
Q Consensus 272 ~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~-~~~~~~ly~~gg~~~~i~~ 350 (433)
++..++.|+.+ ..+.+||+.+.+-... +....... ..+ ..-++.+++.| ..+.+.+
T Consensus 213 ~~~~l~~~~~d-------~~i~i~d~~~~~~~~~--~~~~~~~v-------------~~~~~~~~~~~l~~~-~d~~i~i 269 (372)
T 1k8k_C 213 NGSRVAWVSHD-------STVCLADADKKMAVAT--LASETLPL-------------LAVTFITESSLVAAG-HDCFPVL 269 (372)
T ss_dssp SSSEEEEEETT-------TEEEEEEGGGTTEEEE--EECSSCCE-------------EEEEEEETTEEEEEE-TTSSCEE
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCceeEE--EccCCCCe-------------EEEEEecCCCEEEEE-eCCeEEE
Confidence 56666666654 2478899877653221 11111110 022 33477766666 7888999
Q ss_pred EeCCC--CcEEEeccC
Q 013929 351 YDKER--RLWFTIGRL 364 (433)
Q Consensus 351 yd~~~--~~W~~v~~l 364 (433)
||..+ ++|..+..+
T Consensus 270 ~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 270 FTYDSAAGKLSFGGRL 285 (372)
T ss_dssp EEEETTTTEEEECCCC
T ss_pred EEccCcCceEEEeecc
Confidence 99988 999887544
No 78
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.53 E-value=0.29 Score=44.41 Aligned_cols=148 Identities=11% Similarity=0.099 Sum_probs=76.5
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.+++.|+. ...+.+||..+++-... ++..........+ ++.+++.|+.+ ..+.+||..+.+-
T Consensus 118 ~~~~l~s~~~------d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~ 183 (312)
T 4ery_A 118 QSNLIVSGSF------DESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD------GLCRIWDTASGQC 183 (312)
T ss_dssp SSSEEEEEET------TSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCE
T ss_pred CCCEEEEEeC------CCcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCce
Confidence 3455555654 23588999887653221 1111111122222 55667777654 3488899987754
Q ss_pred EE-cCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 254 KV-LPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 254 ~~-~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
.. +..............-+++.++.|+.+ ..+.+||..+.+-.. +.......... ...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~-------------~~~ 243 (312)
T 4ery_A 184 LKTLIDDDNPPVSFVKFSPNGKYILAATLD-------NTLKLWDYSKGKCLKTYTGHKNEKYCI-------------FAN 243 (312)
T ss_dssp EEEECCSSCCCEEEEEECTTSSEEEEEETT-------TEEEEEETTTTEEEEEECSSCCSSSCC-------------CEE
T ss_pred eeEEeccCCCceEEEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEEEecCCceEEE-------------EEE
Confidence 22 111111111111112256666666654 257889998765322 11111111110 012
Q ss_pred -EEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 332 -AVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 332 -~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
...++.+++.|+..+.|.+||..+++
T Consensus 244 ~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EEeCCCcEEEEECCCCEEEEEECCCch
Confidence 22357777888888999999998875
No 79
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.51 E-value=0.55 Score=44.01 Aligned_cols=206 Identities=15% Similarity=0.083 Sum_probs=116.7
Q ss_pred ccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEE--ECCEEEEECCCCCCcccceeEEEEEcCCCceecC
Q 013929 131 EHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA--VGTELLVFGRELTAHHISHVIYRYSILTNSWSSG 208 (433)
Q Consensus 131 ~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 208 (433)
+++|++. ..+.+..+++.......+..-... ..+++. .++.||+.-- ..+.++++++.....+.+
T Consensus 44 ~~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~------~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 44 EPVLLFA-NRIDIRQVLPHRSEYTLLLNNLEN------AIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEEV 110 (349)
T ss_dssp CCEEEEE-CBSCEEEECTTSCCEEEEECSCSC------EEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEE
T ss_pred CceeEee-cccceEEEeCCCCeeEEeecCCCc------eEEEEEeccccEEEEEec------cCCceEEEecCCCCceEE
Confidence 4566655 345688888887766554321110 111222 2578988742 234689999987765443
Q ss_pred C--CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC--CCCCCCcceeEEEE--CCEEEEEcc
Q 013929 209 M--RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP--SMKNPRKMCSGVFM--DGKFYVIGG 280 (433)
Q Consensus 209 ~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~lyv~GG 280 (433)
. .+..| .++++ .++.||+.-. ....++++++....-+.+. .+..| .+.++- ++.||+.--
T Consensus 111 ~~~~~~~p---~glavd~~~g~ly~~d~------~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~ 178 (349)
T 3v64_C 111 VSTGLESP---GGLAVDWVHDKLYWTDS------GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDW 178 (349)
T ss_dssp ECSSCSCC---CEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEEC
T ss_pred EeCCCCCc---cEEEEecCCCeEEEEcC------CCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEecc
Confidence 2 22222 23333 3789999842 2357889988765433332 12111 234443 688998832
Q ss_pred ccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcE
Q 013929 281 IGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 281 ~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
. ....|+++++....-+.+..- .. ..+.++++. +++||+.....+.|+++|+....=
T Consensus 179 ~------~~~~I~r~~~dG~~~~~~~~~--~~-------------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 179 G------NTPRIEASSMDGSGRRIIADT--HL-------------FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp S------SSCEEEEEETTSCSCEESCCS--SC-------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred C------CCCEEEEEeCCCCCcEEEEEC--CC-------------CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 1 125689999876543333211 10 011245554 789999988788999999876543
Q ss_pred EEec--cCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 359 FTIG--RLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 359 ~~v~--~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
+.+. .+..+ .+++..++.||+.--
T Consensus 238 ~~~~~~~~~~P--------~giav~~~~ly~td~ 263 (349)
T 3v64_C 238 KAVISQGLPHP--------FAITVFEDSLYWTDW 263 (349)
T ss_dssp EEEECSSCSSE--------EEEEEETTEEEEEET
T ss_pred EEEEeCCCCCc--------eEEEEECCEEEEecC
Confidence 3332 22222 345557899998853
No 80
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.51 E-value=0.12 Score=54.34 Aligned_cols=184 Identities=9% Similarity=0.022 Sum_probs=102.0
Q ss_pred EEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCC-
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRM- 211 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~- 211 (433)
|++.+...-+..||+.++++..+......... ..-.+++.. ++.|++... +-+++||+.+++|+.....
T Consensus 420 lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp EEEEETTTEEEEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCT
T ss_pred EEEEeCcCceeEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccc
Confidence 44444445678899988888776532111000 000111111 466766532 2389999999999876432
Q ss_pred -----CCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCC-C-CCC-cce-eEEE--ECCEEEEEc
Q 013929 212 -----NAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSM-K-NPR-KMC-SGVF--MDGKFYVIG 279 (433)
Q Consensus 212 -----p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-p-~~r-~~~-~~~~--~~g~lyv~G 279 (433)
+.... .++.. -++.|++... ..+++||+.++.+ ..... . ... ... .... .+|.|++..
T Consensus 491 ~~~~~~~~~i-~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 491 DGTPVVSKQI-TTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp TCCBCCCCCE-EEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred cccccCCceE-EEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 11111 12222 2567777532 3488999998888 43321 1 111 111 1222 256777643
Q ss_pred cccCCCCcccceEEEEECCCCceEecCC---CCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 013929 280 GIGGSDSKVLTCGEEYDLETETWTEIPN---MSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 280 G~~~~~~~~~~~v~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~ 355 (433)
. . .+.+||+.+++++.... +|..... +++.. +|.|++.+ .+.+.+||+++
T Consensus 561 ~-~--------Gl~~~d~~~~~~~~~~~~~gl~~~~i~---------------~i~~d~~g~lWi~t--~~Gl~~~~~~~ 614 (795)
T 4a2l_A 561 R-E--------GFYCFNEKDKQIKRYNTTNGLPNNVVY---------------GILEDSFGRLWLST--NRGISCFNPET 614 (795)
T ss_dssp S-S--------CEEEEETTTTEEEEECGGGTCSCSCEE---------------EEEECTTSCEEEEE--TTEEEEEETTT
T ss_pred C-C--------CceeECCCCCcEEEeCCCCCCchhheE---------------EEEECCCCCEEEEc--CCceEEEcCCC
Confidence 2 1 36889999998887642 2221111 23332 57888765 47899999999
Q ss_pred CcEEEec
Q 013929 356 RLWFTIG 362 (433)
Q Consensus 356 ~~W~~v~ 362 (433)
++++...
T Consensus 615 ~~~~~~~ 621 (795)
T 4a2l_A 615 EKFRNFT 621 (795)
T ss_dssp TEEEEEC
T ss_pred CcEEEcC
Confidence 9988764
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.035 Score=58.22 Aligned_cols=191 Identities=8% Similarity=0.027 Sum_probs=103.0
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--C--CEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--G--EIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
+..++.|+. ...+.+||..++++..+..+.........+.+ + +..++.|+.++ .+.+||..++.
T Consensus 21 g~~latg~~------dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~~~~~ 88 (753)
T 3jro_A 21 GKRLATCSS------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEENGR 88 (753)
T ss_dssp SCCEEEEET------TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEEETTE
T ss_pred CCeEEEEEC------CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEECCCCc
Confidence 444555543 23578888887777655444322222222332 3 66777777553 48889999988
Q ss_pred eEEcCCCCCCCcceeEEEE--C--CEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 253 WKVLPSMKNPRKMCSGVFM--D--GKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 253 W~~~~~~p~~r~~~~~~~~--~--g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
|..+..+......-..+.+ + +.+++.|+.++ .+.+||+.+..-.....+.......
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-------~I~vwdl~~~~~~~~~~~~~~~~~v------------- 148 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-------KVSVVEFKENGTTSPIIIDAHAIGV------------- 148 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-------EEEEEECCSSSCCCCEEEECCSSCE-------------
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-------cEEEEEeecCCCcceeEeecCCCce-------------
Confidence 7666544433333333333 3 67778877652 5788888776211110000000000
Q ss_pred CEEEEE--------------CCEEEEEecCCCeEEEEeCCCC--cEEEeccCCCcccCCCcccEEEEE-eC---CEEEEE
Q 013929 329 PLVAVV--------------NNELYAADYADMEVRKYDKERR--LWFTIGRLPERANSMNGWGLAFRA-CG---DRLIVI 388 (433)
Q Consensus 329 ~~~~~~--------------~~~ly~~gg~~~~i~~yd~~~~--~W~~v~~lp~~~~~~~~~~~~~~~-~~---~~l~v~ 388 (433)
.++... ++.+++.|+..+.|..||..++ .+..+..+...... -.+++. .+ +.+++.
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~----V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEECCCCSSSEEEEE
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc----EEEEEeccCCCCCCEEEE
Confidence 011111 4677888888889999988654 45554444332211 122332 23 678888
Q ss_pred cCCCCCCCCeeEEEEeecCCC
Q 013929 389 GGPKASGEGFIELNSWVPSEG 409 (433)
Q Consensus 389 GG~~~~~~~~~~~~~~~~~~~ 409 (433)
||.++ .+.+|++...
T Consensus 225 ~s~Dg------~I~iwd~~~~ 239 (753)
T 3jro_A 225 VSQDR------TCIIWTQDNE 239 (753)
T ss_dssp EESSS------CEEEEEESSS
T ss_pred EecCC------EEEEecCCCC
Confidence 87643 2677877654
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.46 E-value=0.1 Score=49.40 Aligned_cols=133 Identities=11% Similarity=0.123 Sum_probs=67.5
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCe-EEcCCCCCCCcceeEEE
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTW-KVLPSMKNPRKMCSGVF 270 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~p~~r~~~~~~~ 270 (433)
..+.+||..+++-...-... ...-..++.. ++..++.|+.+ ..+.+||..+..- ..+... ...-..++.
T Consensus 227 g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~ 297 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYGH--SQSIVSASW 297 (425)
T ss_dssp GCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTEEEEEETT------SCEEEECSSSBSCSEEECCC--SSCEEEEEE
T ss_pred CeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCccceEecCC--CccEEEEEE
Confidence 45899999876432111111 1111222222 55566666643 3478888876542 111111 111223333
Q ss_pred E-CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeE
Q 013929 271 M-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEV 348 (433)
Q Consensus 271 ~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i 348 (433)
. ++ +++.|+.+ ..+.+||+.+.+-...-... .... ..++. -++.+++.++..+.|
T Consensus 298 ~~~~-~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~--~~~i-------------~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 298 VGDD-KVISCSMD-------GSVRLWSLKQNTLLALSIVD--GVPI-------------FAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp ETTT-EEEEEETT-------SEEEEEETTTTEEEEEEECT--TCCE-------------EEEEECTTSSEEEEEETTSCE
T ss_pred CCCC-EEEEEeCC-------CcEEEEECCCCcEeEecccC--CccE-------------EEEEEcCCCCEEEEEECCCeE
Confidence 3 45 66666554 25788999876532221111 1110 01222 256777788888899
Q ss_pred EEEeCCCCc
Q 013929 349 RKYDKERRL 357 (433)
Q Consensus 349 ~~yd~~~~~ 357 (433)
.+||..+..
T Consensus 355 ~i~~~~~~~ 363 (425)
T 1r5m_A 355 NVYDLKKLN 363 (425)
T ss_dssp EEEECHHHH
T ss_pred EEEECCCCc
Confidence 999987655
No 83
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.43 E-value=0.55 Score=43.20 Aligned_cols=209 Identities=13% Similarity=0.083 Sum_probs=111.1
Q ss_pred cEEEEeeccceEEEEecCCCcEEeC-CCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCC----Cc
Q 013929 132 HWVYFSCHLLEWEAFDPIRRRWMHL-PRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILT----NS 204 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~~W~~l-~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t----~~ 204 (433)
++|++.. .+.+..+|+.+.....+ +.+..+ .+++.. ++.||+.... .+.++++|+.. ..
T Consensus 2 ~~ll~~~-~~~I~~i~~~~~~~~~~~~~~~~p-------~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 2 AYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNV-------VALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSS 67 (316)
T ss_dssp CEEEEEC-BSSEEEEETTSCCCEEEECSCSSE-------EEEEEETTTTEEEEEETT------TTEEEEEEC--------
T ss_pred CEEEEEC-CCeEEEEECCCcceEehhcCCCce-------EEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcc
Confidence 4455543 45678888887766544 222221 122332 5789988532 34688999876 22
Q ss_pred eecC-C-CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEE
Q 013929 205 WSSG-M-RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVI 278 (433)
Q Consensus 205 W~~~-~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~ 278 (433)
-..+ + .+..| ..+++ .++.||+.-. ....++++|+....-+.+..... ..-...++ .++.||+.
T Consensus 68 ~~~~~~~~~~~p---~glavd~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~~~~~~-~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 68 YDTVISRDIQAP---DGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENG-SKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp CEEEECSSCSCC---CEEEEETTTTEEEEEET------TTTEEEEEETTSSSEEEEEECTT-CCEEEEEEETTTTEEEEE
T ss_pred cEEEEeCCCCCc---CEEEEeecCCeEEEEEC------CCCEEEEEeCCCCceEEEEECCC-CCcceEEeCCCCCEEEEE
Confidence 2221 1 22222 34444 4789999832 24578899987654333321111 11123444 36889987
Q ss_pred ccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 013929 279 GGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 279 GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
... ....|+++++....-+.+.... .. ++.++++. +++||+.....+.|+++|....
T Consensus 138 d~~------~~~~I~~~~~dG~~~~~~~~~~--~~-------------~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 138 DWG------TPAKIKKGGLNGVDIYSLVTEN--IQ-------------WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp ECS------SSCEEEEEETTSCCEEEEECSS--CS-------------CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccC------CCCeEEEEcCCCCCeEEEEECC--CC-------------CceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 421 1246888988654433331110 00 11245554 6899999887889999999765
Q ss_pred cEEEeccCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 357 LWFTIGRLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 357 ~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
.-+.+...+.... +-.+++..+++||+.-
T Consensus 197 ~~~~~~~~~~~~~----~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 197 NRKTILEDEKRLA----HPFSLAVFEDKVFWTD 225 (316)
T ss_dssp SCEEEEECTTTTS----SEEEEEEETTEEEEEE
T ss_pred ceEEEeecCCccC----CcEEEEEECCEEEEEE
Confidence 4333332111110 1134555688998876
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.42 E-value=0.14 Score=53.57 Aligned_cols=225 Identities=13% Similarity=0.170 Sum_probs=109.1
Q ss_pred cEEEEeeccceEEEEecCCCcEEeC-CCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCC
Q 013929 132 HWVYFSCHLLEWEAFDPIRRRWMHL-PRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR 210 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~~W~~l-~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 210 (433)
.++.+......+..||..+.+.... .....+. .......++..+++|+. ...+.+||..+++....-.
T Consensus 26 ~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 26 PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPV-----RAGKFIARKNWIIVGSD------DFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-----EEEEEEGGGTEEEEEET------TSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEEecCCCcE-----EEEEEeCCCCEEEEEeC------CCeEEEEECCCCcEEEEEe
Confidence 4555555556788888877654322 1111110 00011124555556553 3368999998877532211
Q ss_pred CCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCc-ceeEEEE--CCEEEEEccccCCCC
Q 013929 211 MNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRK-MCSGVFM--DGKFYVIGGIGGSDS 286 (433)
Q Consensus 211 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~--~g~lyv~GG~~~~~~ 286 (433)
.. ...-.+++. -++..++.|+.+ ..+.+||..++ |.....+..... -..++.. ++.+++.|+.+
T Consensus 95 ~~-~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---- 162 (814)
T 3mkq_A 95 AH-PDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD---- 162 (814)
T ss_dssp CC-SSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT----
T ss_pred cC-CCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC----
Confidence 11 111112222 245455565533 35788888765 222111111111 1223333 46677777665
Q ss_pred cccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE---CCEEEEEecCCCeEEEEeCCCCcEEEecc
Q 013929 287 KVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV---NNELYAADYADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 287 ~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~---~~~ly~~gg~~~~i~~yd~~~~~W~~v~~ 363 (433)
..+.+||+.+..-...-........ ..++.. ++.+++.|+..+.|..||..+++-...
T Consensus 163 ---g~v~vwd~~~~~~~~~~~~~~~~~v--------------~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-- 223 (814)
T 3mkq_A 163 ---RTVKVWSLGQSTPNFTLTTGQERGV--------------NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT-- 223 (814)
T ss_dssp ---SEEEEEETTCSSCSEEEECCCTTCC--------------CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE--
T ss_pred ---CeEEEEECCCCcceeEEecCCCCCE--------------EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE--
Confidence 2578899866532111111110111 123322 677888888889999999987753222
Q ss_pred CCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 364 LPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 364 lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+...... -.+++ ..++.+++.|+.++ .+.+|+...
T Consensus 224 ~~~~~~~----v~~~~~~~~~~~l~~~~~dg------~v~vwd~~~ 259 (814)
T 3mkq_A 224 LEGHMSN----VSFAVFHPTLPIIISGSEDG------TLKIWNSST 259 (814)
T ss_dssp EECCSSC----EEEEEECSSSSEEEEEETTS------CEEEEETTT
T ss_pred EcCCCCC----EEEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence 2111110 12222 23566777776533 266777643
No 85
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.40 E-value=1.1 Score=46.24 Aligned_cols=208 Identities=15% Similarity=0.150 Sum_probs=111.8
Q ss_pred EEEEeeccceEEEEecCC--CcEEeCCCCCCccc----cccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--
Q 013929 133 WVYFSCHLLEWEAFDPIR--RRWMHLPRMTSNEC----FMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS-- 204 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~--~~W~~l~~~p~~~~----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-- 204 (433)
.+|+......++++|..+ ..|+.-...+.... ........++.+++||+... ...++.+|..|++
T Consensus 79 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEV 151 (677)
T ss_dssp EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEE
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEE
Confidence 456655556788999877 44876544332110 00112345667889988742 2358999999885
Q ss_pred eecCCC--CCC-CcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCCC---C-------------
Q 013929 205 WSSGMR--MNA-PRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKNP---R------------- 263 (433)
Q Consensus 205 W~~~~~--~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~---r------------- 263 (433)
|+.-.. .+. .....+.++.+++||+..+..+. .....++.||..+++ |+.-...+.. .
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY-GVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eeecCCcCcCcCcccccCcEEECCEEEEEeccccc-CCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 764321 111 11222345668888876432221 124679999999876 8763221110 0
Q ss_pred ---------c---c-eeEEE--ECCEEEEEccccC-----------CCCcccceEEEEECCCCc--eEecCCCCCCCCCC
Q 013929 264 ---------K---M-CSGVF--MDGKFYVIGGIGG-----------SDSKVLTCGEEYDLETET--WTEIPNMSPARGGA 315 (433)
Q Consensus 264 ---------~---~-~~~~~--~~g~lyv~GG~~~-----------~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~ 315 (433)
. . ...++ -++.+|+-.+... ....+...+..+|+.|++ |+.-..........
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~ 310 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYT 310 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccc
Confidence 0 0 11222 2577887654320 112344579999999875 76432111100000
Q ss_pred CCCCcCCCCcCCCCEEEE--ECC---EEEEEecCCCeEEEEeCCCCc
Q 013929 316 ARGTEMPASAEAPPLVAV--VNN---ELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~--~~~---~ly~~gg~~~~i~~yd~~~~~ 357 (433)
....+.++. .+| .+++++...+.++++|.++++
T Consensus 311 ---------~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 311 ---------STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp ---------CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred ---------cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 000012222 356 566677677889999998875
No 86
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.38 E-value=0.6 Score=48.02 Aligned_cols=207 Identities=14% Similarity=0.115 Sum_probs=110.4
Q ss_pred EEEEeeccceEEEEecCCC--cEEeCCCCCCcccc-cc---CCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--
Q 013929 133 WVYFSCHLLEWEAFDPIRR--RWMHLPRMTSNECF-MC---SDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS-- 204 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~--~W~~l~~~p~~~~~-~~---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-- 204 (433)
.+|+.+....++++|..+. .|+.-+..+..... .+ ...+.++.+++||+... ...++.+|..|++
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAI 140 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEE
T ss_pred EEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEe
Confidence 4566666677889998774 48765443322110 00 12334567889888652 2368999999885
Q ss_pred eecCCCCCC--CcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcC--CCCCCC---------------
Q 013929 205 WSSGMRMNA--PRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLP--SMKNPR--------------- 263 (433)
Q Consensus 205 W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~--~~p~~r--------------- 263 (433)
|+.-..-+. .....+.++.+++||+..+.... .....++.||..+++ |+.-. .-|...
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY-GVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeeccCCCCCcceecCCCEEECCEEEEeCCCCCc-CCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 864321111 11222345678888875332111 134679999999876 87532 111110
Q ss_pred -----------cceeEEE--ECCEEEEEccccC-----------CCCcccceEEEEECCCCc--eEecCCCCCCCCCCCC
Q 013929 264 -----------KMCSGVF--MDGKFYVIGGIGG-----------SDSKVLTCGEEYDLETET--WTEIPNMSPARGGAAR 317 (433)
Q Consensus 264 -----------~~~~~~~--~~g~lyv~GG~~~-----------~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~ 317 (433)
.....++ .++.+|+-.+... ....+...+..+|+.|++ |+.-......+...
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~-- 297 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT-- 297 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC--
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc--
Confidence 0011222 2467777644220 112234579999999875 76532211111100
Q ss_pred CCcCCCCcCCCCEE---EEECCE---EEEEecCCCeEEEEeCCCCc
Q 013929 318 GTEMPASAEAPPLV---AVVNNE---LYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 318 ~~~~~~~~~~~~~~---~~~~~~---ly~~gg~~~~i~~yd~~~~~ 357 (433)
...+.+ ..++++ +++++...+.++++|..+++
T Consensus 298 --------~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 298 --------ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp --------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred --------CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 000111 234665 55566667788888888875
No 87
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.36 E-value=0.51 Score=42.86 Aligned_cols=220 Identities=13% Similarity=0.150 Sum_probs=104.9
Q ss_pred cEEEEeeccceEEEEecCCCcEEeC-CCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCcee-cCC
Q 013929 132 HWVYFSCHLLEWEAFDPIRRRWMHL-PRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWS-SGM 209 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~~W~~l-~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~ 209 (433)
.+|........+..||..+..-... .....+. .......++..++.|+. ...+.+||..+++-. .+.
T Consensus 26 ~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 26 PWVLTTLYSGRVELWNYETQVEVRSIQVTETPV-----RAGKFIARKNWIIVGSD------DFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-----EEEEEEGGGTEEEEEET------TSEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCceeEEeeccCCcE-----EEEEEeCCCCEEEEECC------CCEEEEEECCCCcEEEEEe
Confidence 3455444556677888876543221 1111000 00111224455555553 335888998877532 111
Q ss_pred CCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE---CCEEEEEccccCCC
Q 013929 210 RMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM---DGKFYVIGGIGGSD 285 (433)
Q Consensus 210 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~g~lyv~GG~~~~~ 285 (433)
. ....-.+++.. ++.+++.|+.++ .+.+||..++. .....+......-..+.+ ++.+++.|+.+
T Consensus 95 ~--h~~~v~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D--- 162 (304)
T 2ynn_A 95 A--HPDYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD--- 162 (304)
T ss_dssp C--CSSCEEEEEECSSSSEEEEEETTS------CEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT---
T ss_pred C--CCCcEEEEEEcCCCCEEEEECCCC------eEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC---
Confidence 1 11111222222 455666676543 47788876642 111111111111122222 45677777766
Q ss_pred CcccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE----CCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 286 SKVLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV----NNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 286 ~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~----~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
..+.+||+.+.. ...... .. ... ..+.+ ++.+++.|+..+.|.+||..+++-
T Consensus 163 ----~~v~iwd~~~~~~~~~~~~~--~~-~~v--------------~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~- 220 (304)
T 2ynn_A 163 ----RTVKVWSLGQSTPNFTLTTG--QE-RGV--------------NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC- 220 (304)
T ss_dssp ----SEEEEEETTCSSCSEEEECC--CT-TCE--------------EEEEECCSTTCCEEEEEETTSEEEEEETTTTEE-
T ss_pred ----CeEEEEECCCCCccceeccC--Cc-CcE--------------EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc-
Confidence 247788886543 111110 00 010 12222 556777788889999999988753
Q ss_pred EeccCCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 360 TIGRLPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 360 ~v~~lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+..+...... -..++ ..++.+++.|+.+. .+.+|+..
T Consensus 221 -~~~~~~h~~~----v~~~~~~p~~~~l~s~s~Dg------~i~iWd~~ 258 (304)
T 2ynn_A 221 -VATLEGHMSN----VSFAVFHPTLPIIISGSEDG------TLKIWNSS 258 (304)
T ss_dssp -EEEEECCSSC----EEEEEECSSSSEEEEEETTS------CEEEEETT
T ss_pred -ceeeCCCCCC----EEEEEECCCCCEEEEEcCCC------eEEEEECC
Confidence 2222222111 12222 23566777777643 26778774
No 88
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.35 E-value=0.22 Score=45.96 Aligned_cols=182 Identities=13% Similarity=0.121 Sum_probs=92.7
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
+.+++.|+. ...+.+||..+++-.. +..-+.. .......-+++.++.|+.+ ..+.+||..+..-..
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVD-AWTLAFSPDSQYLATGTHV------GKVNIFGVESGKKEY 158 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTEEEEEEECCTTC-CCCEEECTTSSEEEEECTT------SEEEEEETTTCSEEE
T ss_pred CCEEEEEeC------CCcEEEEECCCCCEEEEEeCCCcc-EEEEEECCCCCEEEEEcCC------CcEEEEEcCCCceeE
Confidence 445555543 3358889988775422 2111111 1111122255666666543 457788887765322
Q ss_pred cCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCCcCCCCEEEE
Q 013929 256 LPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPNMSPARGGAARGTEMPASAEAPPLVAV 333 (433)
Q Consensus 256 ~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~~~~~~~~~~ 333 (433)
.-... ...-.+++. -+++.++.|+.++ .+.+||+.+++-.. +.....+. .+++.
T Consensus 159 ~~~~~-~~~v~~~~~spdg~~lasg~~dg-------~i~iwd~~~~~~~~~~~~h~~~v----------------~~l~~ 214 (321)
T 3ow8_A 159 SLDTR-GKFILSIAYSPDGKYLASGAIDG-------IINIFDIATGKLLHTLEGHAMPI----------------RSLTF 214 (321)
T ss_dssp EEECS-SSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEEECCCSSCC----------------CEEEE
T ss_pred EecCC-CceEEEEEECCCCCEEEEEcCCC-------eEEEEECCCCcEEEEEcccCCce----------------eEEEE
Confidence 11100 111112222 3677777777652 47889998875322 21111110 12322
Q ss_pred -ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 334 -VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 334 -~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
-++.+++.|+..+.|.+||..+..-... +..... .-.+++. .+++.++.|+.+. .+.+|+..
T Consensus 215 spd~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~h~~----~v~~~~~sp~~~~l~s~s~D~------~v~iwd~~ 278 (321)
T 3ow8_A 215 SPDSQLLVTASDDGYIKIYDVQHANLAGT--LSGHAS----WVLNVAFCPDDTHFVSSSSDK------SVKVWDVG 278 (321)
T ss_dssp CTTSCEEEEECTTSCEEEEETTTCCEEEE--ECCCSS----CEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred cCCCCEEEEEcCCCeEEEEECCCcceeEE--EcCCCC----ceEEEEECCCCCEEEEEeCCC------cEEEEeCC
Confidence 3677888888889999999987764322 221111 1122333 3567777776643 36677774
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.32 E-value=0.28 Score=44.42 Aligned_cols=203 Identities=9% Similarity=0.096 Sum_probs=96.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCc-ceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPR-CLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
+++.++.|+. ...+.+||..+++.+.+..+.... .-.+++.. ++.+++.|+.+ ..+.++|..++
T Consensus 20 ~g~~las~s~------D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D------~~v~iWd~~~~ 87 (297)
T 2pm7_B 20 YGKRMATCSS------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVMIWKEENG 87 (297)
T ss_dssp TSSEEEEEET------TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------TEEEEEEBSSS
T ss_pred CCCEEEEEeC------CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC------CEEEEEEcCCC
Confidence 3455556654 234788888765443332222111 11222222 25667777654 34788998887
Q ss_pred CeEEcCCCCCCCcceeEEEE--C--CEEEEEccccCCCCcccceEEEEECCCCc-eEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 252 TWKVLPSMKNPRKMCSGVFM--D--GKFYVIGGIGGSDSKVLTCGEEYDLETET-WTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~~~~~~--~--g~lyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
.|..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+.. +.... ..+|..... +...
T Consensus 88 ~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-------~~v~~wd~~~~~~~~~~~-----~~~h~~~v~--~~~~ 153 (297)
T 2pm7_B 88 RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-------GKVSVVEFKENGTTSPII-----IDAHAIGVN--SASW 153 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEEBCSSSCBCCEE-----EECCSSCEE--EEEE
T ss_pred ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-------CcEEEEEecCCCceeeee-----eecccCccc--eEee
Confidence 77544322222222222322 2 5667777655 246778876652 21100 001100000 0000
Q ss_pred CCC-------EEEEECCEEEEEecCCCeEEEEeCCCC--cEEEeccCCCcccCCCcccEEEEEe-C---CEEEEEcCCCC
Q 013929 327 APP-------LVAVVNNELYAADYADMEVRKYDKERR--LWFTIGRLPERANSMNGWGLAFRAC-G---DRLIVIGGPKA 393 (433)
Q Consensus 327 ~~~-------~~~~~~~~ly~~gg~~~~i~~yd~~~~--~W~~v~~lp~~~~~~~~~~~~~~~~-~---~~l~v~GG~~~ 393 (433)
.+. .....++++++.|+..+.|..||..+. .|..+..+..... .-.+++.. + +.+++.|+.+.
T Consensus 154 ~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~----~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD----WVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp CCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS----CEEEEEECCCCSSSEEEEEEETTS
T ss_pred cCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC----ceEEEEECCCCCCceEEEEEECCC
Confidence 000 000112457788888888999988654 3655554443221 11233332 2 36777776543
Q ss_pred CCCCeeEEEEeecCCCCCCce
Q 013929 394 SGEGFIELNSWVPSEGPPQWN 414 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~W~ 414 (433)
.+.+|+.+.....|.
T Consensus 230 ------~v~iWd~~~~~~~~~ 244 (297)
T 2pm7_B 230 ------TCIIWTQDNEQGPWK 244 (297)
T ss_dssp ------CEEEEEESSTTSCCE
T ss_pred ------cEEEEEeCCCCCccc
Confidence 367787765444454
No 90
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.30 E-value=0.33 Score=46.98 Aligned_cols=211 Identities=9% Similarity=-0.094 Sum_probs=99.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceec--CCCCCCC-cceeeE-EEeC---CEEEEEccCCCCCCcCCceEEEeC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSS--GMRMNAP-RCLFGS-ASLG---EIAILAGGSDLEGNILSSAEMYNS 248 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~--~~~~p~~-r~~~~~-~~~~---~~iyv~GG~~~~~~~~~~~~~yd~ 248 (433)
++..++.|+. ...+++|+..+.+... +..+... ..-.++ ..-+ +++++.|+.+ ..+.+||.
T Consensus 160 ~~~~l~~~~~------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd~ 227 (450)
T 2vdu_B 160 DDTTVIIADK------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISHY 227 (450)
T ss_dssp TSSEEEEEET------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEEE
T ss_pred CCCEEEEEeC------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEEC
Confidence 4555555543 3357888887665432 1111111 111122 2235 7777777754 35888888
Q ss_pred CCCCeEEcCCCCCCCcc-eeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCC-------------CCCCC
Q 013929 249 ETQTWKVLPSMKNPRKM-CSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMS-------------PARGG 314 (433)
Q Consensus 249 ~t~~W~~~~~~p~~r~~-~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p-------------~~r~~ 314 (433)
.+..-...- +...... ..++..++++++.|+.+ ..+.+||+.+++....-... ..+..
T Consensus 228 ~~~~~~~~~-~~~h~~~v~~~~~sd~~~l~s~~~d-------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 228 PQCFIVDKW-LFGHKHFVSSICCGKDYLLLSAGGD-------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp SCTTCEEEE-CCCCSSCEEEEEECSTTEEEEEESS-------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred CCCceeeee-ecCCCCceEEEEECCCCEEEEEeCC-------CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence 776532210 1011111 12222277788887755 35788999887643221100 00000
Q ss_pred CCCCCcCCCCcCCCCEEEEE-CC-EEEEEecCCCeEEEEeC--CC-CcEEEeccCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 315 AARGTEMPASAEAPPLVAVV-NN-ELYAADYADMEVRKYDK--ER-RLWFTIGRLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~~-~ly~~gg~~~~i~~yd~--~~-~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
.... .........++.. ++ .|++.++..+.|.+||. .+ +.+..+..++.... -..++...+.+++..
T Consensus 300 ~~~~---~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~-----v~~~~~~~~~~~v~~ 371 (450)
T 2vdu_B 300 NENN---DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYN-----VISLSAHNDEFQVTL 371 (450)
T ss_dssp --------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSC-----EEEEEEETTEEEEEE
T ss_pred cccc---ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCc-----eEEEEecCCcEEEEE
Confidence 0000 0000000012222 34 44444436788999998 33 45666655443311 144555667777766
Q ss_pred CCCCCCC-CeeEEEEeecCCCCCCce
Q 013929 390 GPKASGE-GFIELNSWVPSEGPPQWN 414 (433)
Q Consensus 390 G~~~~~~-~~~~~~~~~~~~~~~~W~ 414 (433)
+...... ....+.+|.++.+..+|+
T Consensus 372 ~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 372 DNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred ecccCCCCCCcceEEEEEEcCCCeEE
Confidence 5433211 123356666665666665
No 91
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.29 E-value=0.52 Score=42.46 Aligned_cols=203 Identities=10% Similarity=-0.075 Sum_probs=102.0
Q ss_pred ccceEEEEecCCCc--EEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--eecCCCCCCC
Q 013929 139 HLLEWEAFDPIRRR--WMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS--WSSGMRMNAP 214 (433)
Q Consensus 139 ~~~~~~~yd~~~~~--W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~ 214 (433)
....+.++|+.+.+ |+.-..-.. . .....+..++++++.+ .+.++.||+ +++ |+.-.+ ..
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~-~----~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~~--~~ 76 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGW-E----CNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAAP--AG 76 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTC-C----CCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEECC--TT
T ss_pred CCCEEEEEECCCCeEEEEeCCCccC-C----CcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcCC--CC
Confidence 34567778886644 554322110 0 0111233467788743 235899999 554 653321 11
Q ss_pred cceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCC-CeEEc-C-CCCCC--CcceeEEEECCEEEEEccccCCCCcc
Q 013929 215 RCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQ-TWKVL-P-SMKNP--RKMCSGVFMDGKFYVIGGIGGSDSKV 288 (433)
Q Consensus 215 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~-~-~~p~~--r~~~~~~~~~g~lyv~GG~~~~~~~~ 288 (433)
...+++.. .++++++....+ ...++.+|+.-. .|+.- . ..+.+ .........+|.+++....+
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~------ 145 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT------ 145 (276)
T ss_dssp CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT------
T ss_pred ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC------
Confidence 12223333 366666664321 235778887443 24431 1 11111 11122334467776654322
Q ss_pred cceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc--EEEec-c
Q 013929 289 LTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL--WFTIG-R 363 (433)
Q Consensus 289 ~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~--W~~v~-~ 363 (433)
..+.+||++ ++ |+.-.. .. .+ ......++.+++.+...+.|..+|+++++ |+.-. .
T Consensus 146 -~~v~~~d~~-G~~~w~~~~~--~~--~~-------------~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~ 206 (276)
T 3no2_A 146 -SEVREIAPN-GQLLNSVKLS--GT--PF-------------SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND 206 (276)
T ss_dssp -TEEEEECTT-SCEEEEEECS--SC--CC-------------EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGG
T ss_pred -CEEEEECCC-CCEEEEEECC--CC--cc-------------ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCC
Confidence 357889987 43 654322 11 11 12333478888888777789999999664 66543 2
Q ss_pred CCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 364 LPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 364 lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
++..+. ..........+|.+|+..
T Consensus 207 ~~~~~l--~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 207 IEGVQL--FFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SBSCCC--SEEEEEEECTTSCEEEEE
T ss_pred CCCccc--cccccceEcCCCCEEEEe
Confidence 332221 101122334578999886
No 92
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.29 E-value=0.087 Score=47.95 Aligned_cols=187 Identities=7% Similarity=-0.028 Sum_probs=93.4
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEE-EC-CEEEEECCCCCCcccceeEEEEEcCCCceecC-CCCCC--C
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VG-TELLVFGRELTAHHISHVIYRYSILTNSWSSG-MRMNA--P 214 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~--~ 214 (433)
...+..||+.+.++..+.. +...........++. .+ +.+|+.... +.+++||+. ++...+ ..... +
T Consensus 45 ~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~~~~~~~~~~~~~~ 115 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GTFEEIAKKDSEGRR 115 (314)
T ss_dssp CCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SCEEECCSBCTTSCB
T ss_pred CCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CCEEEEEeccCCCcc
Confidence 4568889988888866532 100000001112222 24 788887532 258999998 777655 32211 1
Q ss_pred -cceeeEEE-eCCEEEEEccCCC---------CCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-----CC-EEEE
Q 013929 215 -RCLFGSAS-LGEIAILAGGSDL---------EGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-----DG-KFYV 277 (433)
Q Consensus 215 -r~~~~~~~-~~~~iyv~GG~~~---------~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-----~g-~lyv 277 (433)
.....++. -++++|+...... .......+++||+. .+...+... .......+.. ++ .+|+
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~~i~~~~~~d~dg~~l~v 192 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIV 192 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ESSEEEEEEEECTTSCEEEEEE
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CCCcceEEEecccCCCCCEEEE
Confidence 11122333 2678888753221 11113568899987 555443210 0111233333 34 4666
Q ss_pred EccccCCCCcccceEEEEECC-CCceEec---CCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEe
Q 013929 278 IGGIGGSDSKVLTCGEEYDLE-TETWTEI---PNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYD 352 (433)
Q Consensus 278 ~GG~~~~~~~~~~~v~~yd~~-t~~W~~~---~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd 352 (433)
.... ...+.+||+. +++.... ..++...... +..++. -+|.||+.....+.|.+||
T Consensus 193 ~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~------------p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 193 AETP-------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGG------------ADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp EETT-------TTEEEEEEEEETTEEEEEEEEEECCCCSSCE------------EEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred EECC-------CCeEEEEECCCCCccccceEEEECCCCCCCC------------CCceEECCCCCEEEEEcCCCEEEEEc
Confidence 6322 2457888875 4433211 1111110010 012333 2588998876677899999
Q ss_pred CCCCc
Q 013929 353 KERRL 357 (433)
Q Consensus 353 ~~~~~ 357 (433)
+.+++
T Consensus 254 ~~~g~ 258 (314)
T 1pjx_A 254 PDGGQ 258 (314)
T ss_dssp TTCBS
T ss_pred CCCCc
Confidence 98554
No 93
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.28 E-value=0.033 Score=51.85 Aligned_cols=192 Identities=11% Similarity=-0.007 Sum_probs=94.3
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEE-EeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCC-CcceeEEE-
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSA-SLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNP-RKMCSGVF- 270 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~- 270 (433)
.+|.+|+.+++++.+...........++ .-+++||+.+.... ...+++||+.+++++.+...... .....++.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 4788888888886543221111111222 23678887753211 25689999988877665442211 11122333
Q ss_pred ECCE-EEEEccccCCCCcccceEEEEECC-CCceEecCCC------CCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEE
Q 013929 271 MDGK-FYVIGGIGGSDSKVLTCGEEYDLE-TETWTEIPNM------SPARGGAARGTEMPASAEAPPLVAVV--NNELYA 340 (433)
Q Consensus 271 ~~g~-lyv~GG~~~~~~~~~~~v~~yd~~-t~~W~~~~~~------p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~ 340 (433)
-+|+ +|+.+..+ ..+.+||+. ++..+.+... |..+... .....+.+ ++++|+
T Consensus 95 pdg~~l~~~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~-----------~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 95 EARQLVYSANYHK-------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG-----------SHIHYTDLTPDNRLAV 156 (347)
T ss_dssp TTTTEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS-----------CCEEEEEECTTSCEEE
T ss_pred CCCCEEEEEeCCC-------CEEEEEEeCCCCCeeecceeecCCCCCCccccC-----------CCceEEEECCCCcEEE
Confidence 3454 56554222 346778774 3344333211 1111110 00122333 567888
Q ss_pred EecCCCeEEEEeCC-CCcEEEeccCCCcccCCCcccEEEEEeCCE-EEEEcCCCCCCCCeeEEEEeecCCCCCCceE
Q 013929 341 ADYADMEVRKYDKE-RRLWFTIGRLPERANSMNGWGLAFRACGDR-LIVIGGPKASGEGFIELNSWVPSEGPPQWNL 415 (433)
Q Consensus 341 ~gg~~~~i~~yd~~-~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~-l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~ 415 (433)
.+...+.+.+||.. +++...+......... +.......-+++ ||+.+... ..+.+|+++..+.+++.
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~--~p~~~~~spdg~~l~v~~~~~------~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF--GPRHLVFSPDGQYAFLAGELS------SQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECCTTC--CEEEEEECTTSSEEEEEETTT------TEEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEEECCCCcEEEeeeEEcCCCC--CCceEEECCCCCEEEEEeCCC------CEEEEEEecCCCCceEE
Confidence 87767889999988 6666655422211100 000212223454 77765432 23566776644445443
No 94
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.27 E-value=0.0014 Score=61.36 Aligned_cols=45 Identities=4% Similarity=0.051 Sum_probs=39.1
Q ss_pred CCCCCCCCchhHHHhhccccCcccchhhhhhcHHHHHhhcCccee
Q 013929 77 LDSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELY 121 (433)
Q Consensus 77 ~~~~~~~LP~dl~~~iL~rlP~~~~~~~~~V~k~w~~ll~~~~~~ 121 (433)
+...|..||+|++..|+.+|+.....+++.|||+|+.++.++.++
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 456788999999999999999999999999999999998776543
No 95
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.23 E-value=0.44 Score=42.62 Aligned_cols=178 Identities=12% Similarity=0.042 Sum_probs=92.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC---C-CcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN---A-PRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSE 249 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~-~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 249 (433)
++.+|+.... ...+.+||+..+....++... . ......++. -+++|||.+.. ....+.+||+.
T Consensus 40 ~g~l~v~~~~------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~ 108 (286)
T 1q7f_A 40 QNDIIVADTN------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQY 108 (286)
T ss_dssp TCCEEEEEGG------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTT
T ss_pred CCCEEEEECC------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCC
Confidence 4678877532 235888998754433332211 1 112234444 36799998532 12468889965
Q ss_pred CCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 250 TQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 250 t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
...-..+..... .....+++ -+|++|+....+ ..+.+||+.......+.... .... +
T Consensus 109 g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~g~~~~~~~~~~-~~~~-------------p 166 (286)
T 1q7f_A 109 GQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKV-------MRVIIFDQNGNVLHKFGCSK-HLEF-------------P 166 (286)
T ss_dssp SCEEEEECTTTC-SCEEEEEECTTSCEEEEETTT-------TEEEEECTTSCEEEEEECTT-TCSS-------------E
T ss_pred CcEEEEecCccC-CCceEEEEeCCCCEEEEECCC-------CEEEEEcCCCCEEEEeCCCC-ccCC-------------c
Confidence 443333322111 11123333 367888875332 35788997665444432110 0001 0
Q ss_pred CEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCC
Q 013929 329 PLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGP 391 (433)
Q Consensus 329 ~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~ 391 (433)
..+++. ++++|+.+...+.|.+||+..+....+..-.. .. .-.+++. -+|+||+....
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~-~~----~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI-TN----YPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTT-SC----SEEEEEECTTCCEEEEECS
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCc-cC----CCcEEEECCCCCEEEEeCC
Confidence 123332 58999988777899999987665555432110 00 0122333 36788887744
No 96
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.21 E-value=0.39 Score=45.52 Aligned_cols=201 Identities=9% Similarity=0.009 Sum_probs=94.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++..++.|+. ...+.+||..+++-...-.. ....-.+++.. ++.+++.|+.+ ..+.+||..+.+-.
T Consensus 108 ~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 108 QMRRFILGTT------EGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSNP 174 (420)
T ss_dssp SSCEEEEEET------TSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCCC
T ss_pred CCCEEEEEEC------CCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcCc
Confidence 5666777654 23588899887654332111 11111222222 55666666644 35888998865411
Q ss_pred EcCCCCCCCcc-eeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCceEec-CCCCCCCCCCCCCCc---------CC
Q 013929 255 VLPSMKNPRKM-CSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI-PNMSPARGGAARGTE---------MP 322 (433)
Q Consensus 255 ~~~~~p~~r~~-~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~---------~~ 322 (433)
. .+...... .+++.. +++.++.|+.++ .+.+||+.+++-... ............... ..
T Consensus 175 ~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 175 R--TLIGHRATVTDIAIIDRGRNVLSASLDG-------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp E--EEECCSSCEEEEEEETTTTEEEEEETTS-------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred e--EEcCCCCcEEEEEEcCCCCEEEEEcCCC-------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 1 11111111 122222 566677777652 467889887653221 111000000000000 00
Q ss_pred CCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEe-CCE-EEEEcCCCCCCCCeeE
Q 013929 323 ASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRAC-GDR-LIVIGGPKASGEGFIE 400 (433)
Q Consensus 323 ~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~-~~~-l~v~GG~~~~~~~~~~ 400 (433)
...........-++.+++.|+..+.|.+||..+++-... ++.... ..-.+++.. ++. +++.|+.++ .
T Consensus 246 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~---~~v~~~~~~~~~~~~l~~g~~dg------~ 314 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ--LPSKFT---CSCNSLTVDGNNANYIYAGYENG------M 314 (420)
T ss_dssp CCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE--ECCTTS---SCEEEEEECSSCTTEEEEEETTS------E
T ss_pred ccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE--cccccC---CCceeEEEeCCCCCEEEEEeCCC------e
Confidence 000000001113677888888889999999988753222 111110 011223332 344 777776532 4
Q ss_pred EEEeecCCC
Q 013929 401 LNSWVPSEG 409 (433)
Q Consensus 401 ~~~~~~~~~ 409 (433)
+.+|++...
T Consensus 315 i~vwd~~~~ 323 (420)
T 3vl1_A 315 LAQWDLRSP 323 (420)
T ss_dssp EEEEETTCT
T ss_pred EEEEEcCCC
Confidence 778887543
No 97
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.18 E-value=0.45 Score=44.03 Aligned_cols=164 Identities=13% Similarity=0.130 Sum_probs=83.0
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-- 270 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-- 270 (433)
.+.+||..+++-...-.-.. ..-.+++.. ++.+++.|+.++ .+.+||..+..-... +......-..+.
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~ 235 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHT-GDVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQT--FTGHESDINAICFF 235 (340)
T ss_dssp CEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEE--ECCCSSCEEEEEEC
T ss_pred cEEEEECCCCcEEEEEcCCC-CceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEE--EcCCcCCEEEEEEc
Confidence 58889988876432111111 111222222 566777777553 478899887653221 111111112222
Q ss_pred ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCCeEE
Q 013929 271 MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADMEVR 349 (433)
Q Consensus 271 ~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~~i~ 349 (433)
-+++.++.|+.++ .+.+||+.+..-...-......... .+++ ..++.+++.|+..+.|.
T Consensus 236 p~~~~l~s~s~d~-------~v~iwd~~~~~~~~~~~~~~~~~~v-------------~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 236 PNGNAFATGSDDA-------TCRLFDLRADQELMTYSHDNIICGI-------------TSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp TTSSEEEEEETTS-------CEEEEETTTTEEEEEECCTTCCSCE-------------EEEEECTTSSEEEEEETTSEEE
T ss_pred CCCCEEEEEcCCC-------cEEEEECCCCcEEEEEccCCcccce-------------EEEEECCCCCEEEEECCCCeEE
Confidence 2577777777663 4688998876432211111111110 0111 22678888888889999
Q ss_pred EEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCC
Q 013929 350 KYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPK 392 (433)
Q Consensus 350 ~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~ 392 (433)
+||..+..= +..+..... .-.+++. .+++.++.||.+
T Consensus 296 vwd~~~~~~--~~~~~~h~~----~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 296 VWDALKADR--AGVLAGHDN----RVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEETTTCCE--EEEEECCSS----CEEEEEECTTSSCEEEEETT
T ss_pred EEEcccCcE--eeEeecCCC----cEEEEEEcCCCCEEEEEcCC
Confidence 999876542 222222111 1122332 356777777764
No 98
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.15 E-value=1.3 Score=44.59 Aligned_cols=208 Identities=12% Similarity=0.080 Sum_probs=110.2
Q ss_pred EEEEeec-cceEEEEec-CC--CcEEeCCCCCCccc-cc---cCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc
Q 013929 133 WVYFSCH-LLEWEAFDP-IR--RRWMHLPRMTSNEC-FM---CSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS 204 (433)
Q Consensus 133 ~l~~~~~-~~~~~~yd~-~~--~~W~~l~~~p~~~~-~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 204 (433)
-+|+... ...++++|. .+ ..|+.-...+.... .. ....+.++.+++||+... ...++.+|..|++
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~ 136 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGK 136 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCC
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCC
Confidence 3455544 456889998 66 45876543322110 00 112345667899998753 2358999999885
Q ss_pred --eec-CCCCCCC-cceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCC------C----------
Q 013929 205 --WSS-GMRMNAP-RCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKN------P---------- 262 (433)
Q Consensus 205 --W~~-~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~------~---------- 262 (433)
|+. +...+.. ....+.++.+++||+..+..+. .....++.||..+++ |+.-...+. +
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEEecCCCCCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 864 2221111 1122334568898876432111 123579999999875 865322111 0
Q ss_pred ------------C---cc----eeEEEE--CCEEEEEccccC--------CCCcccceEEEEECCCCc--eEecCCCCC-
Q 013929 263 ------------R---KM----CSGVFM--DGKFYVIGGIGG--------SDSKVLTCGEEYDLETET--WTEIPNMSP- 310 (433)
Q Consensus 263 ------------r---~~----~~~~~~--~g~lyv~GG~~~--------~~~~~~~~v~~yd~~t~~--W~~~~~~p~- 310 (433)
. .. ...++- .+.+|+-.|... ....+...+..+|+.+++ |+.-.....
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence 0 00 112222 478888655311 111234578999999875 765321110
Q ss_pred --CCCCCCCCCcCCCCcCCCCEEEE--ECC---EEEEEecCCCeEEEEeCCCCc--EEE
Q 013929 311 --ARGGAARGTEMPASAEAPPLVAV--VNN---ELYAADYADMEVRKYDKERRL--WFT 360 (433)
Q Consensus 311 --~r~~~~~~~~~~~~~~~~~~~~~--~~~---~ly~~gg~~~~i~~yd~~~~~--W~~ 360 (433)
..... .+.++. .+| ++++++...+.++++|.++++ |+.
T Consensus 296 ~d~~~~~------------~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 296 WDFAGVN------------QMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp SCCCCCC------------CCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccCC------------CCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 00110 012322 366 466667667789999998875 654
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.13 E-value=0.93 Score=42.79 Aligned_cols=149 Identities=11% Similarity=0.050 Sum_probs=79.0
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceec-----CCCCC-CCcceeeEEEe-CC-EEEEEccCCCCCCcCCceEEEe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSS-----GMRMN-APRCLFGSASL-GE-IAILAGGSDLEGNILSSAEMYN 247 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-----~~~~p-~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd 247 (433)
++.+++.|+. ...+.+||..++.... +..+. ....-.+++.. ++ .+++.|+.+ ..+.+||
T Consensus 93 ~~~~l~s~s~------dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSE------DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWD 160 (402)
T ss_dssp CTTEEEEEET------TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeC------CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEE
Confidence 4566667654 2358899988875432 11111 11111222222 33 467777654 3488999
Q ss_pred CCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEec--CCCCCCCCCCCCCCcCCC
Q 013929 248 SETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI--PNMSPARGGAARGTEMPA 323 (433)
Q Consensus 248 ~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~r~~~~~~~~~~~ 323 (433)
..++.....-...........+.+ ++.+++.|+.+ ..+.+||+.+.+-... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~--------- 224 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------KRVRVIEPRKGTVVAEKDRPHEGTRPV--------- 224 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------SEEEEEETTTTEEEEEEECSSCSSSCC---------
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------CcEEEEeCCCCceeeeeccCCCCCcce---------
Confidence 988765322110111111222222 67777777655 3578899988754322 111111111
Q ss_pred CcCCCCEEEEECCEEEEEe---cCCCeEEEEeCCCCc
Q 013929 324 SAEAPPLVAVVNNELYAAD---YADMEVRKYDKERRL 357 (433)
Q Consensus 324 ~~~~~~~~~~~~~~ly~~g---g~~~~i~~yd~~~~~ 357 (433)
.....-++++++.| ...+.|.+||..+..
T Consensus 225 -----~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 225 -----HAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp -----EEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred -----EEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 01223367888887 577899999988753
No 100
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.11 E-value=0.0013 Score=59.67 Aligned_cols=43 Identities=21% Similarity=0.247 Sum_probs=39.7
Q ss_pred CCCCchhHHHhhccccCcccchhhhhhcHHHHHhhcCcceeee
Q 013929 81 IQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYRL 123 (433)
Q Consensus 81 ~~~LP~dl~~~iL~rlP~~~~~~~~~V~k~w~~ll~~~~~~~~ 123 (433)
+..||+|++..||+.|+.+.++++..|||+||.+..++.++..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~ 47 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY 47 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 4569999999999999999999999999999999999998754
No 101
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.11 E-value=1.6 Score=45.10 Aligned_cols=116 Identities=13% Similarity=0.121 Sum_probs=67.5
Q ss_pred EEEEeeccceEEEEecCC--CcEEeCCCCCCcccc-c---cCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--
Q 013929 133 WVYFSCHLLEWEAFDPIR--RRWMHLPRMTSNECF-M---CSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS-- 204 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~--~~W~~l~~~p~~~~~-~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-- 204 (433)
.+|+.+....++++|..+ ..|..-...+..... . ....+.++.+++||+... ...++.+|..|++
T Consensus 72 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 72 VMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRA 144 (689)
T ss_dssp EEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEE
T ss_pred EEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEe
Confidence 456655566788999876 448765443321100 0 012344667889988752 2358999999885
Q ss_pred eecCCC-CCC--CcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEc
Q 013929 205 WSSGMR-MNA--PRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVL 256 (433)
Q Consensus 205 W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 256 (433)
|+.-.. -+. .....+.++.+++||+-.+.... .....++.||..|++ |+.-
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF-GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEE
T ss_pred eeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc-CCCCEEEEEECCCCcEEEEec
Confidence 864332 111 11222345678998874332111 134579999999886 8753
No 102
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.10 E-value=1 Score=43.00 Aligned_cols=210 Identities=12% Similarity=0.051 Sum_probs=113.8
Q ss_pred ccEEEEeeccceEEEEecCCCcEEeCCC-CCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCC----
Q 013929 131 EHWVYFSCHLLEWEAFDPIRRRWMHLPR-MTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTN---- 203 (433)
Q Consensus 131 ~~~l~~~~~~~~~~~yd~~~~~W~~l~~-~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~---- 203 (433)
+++|++.. .+.+...|+....+..+.+ +..+ .+++.. ++.||+.--. .+.++++++...
T Consensus 83 ~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~-------~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~ 148 (400)
T 3p5b_L 83 IAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNV-------VALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVS 148 (400)
T ss_dssp SCEEEEEE-TTEEEEECTTSCSCEEEECSCSCE-------EEEEEETTTTEEEEEETT------TTEEEEEEC------C
T ss_pred cceeEEec-cceeEEEccCCcceeEeccccCcc-------eEEeeeeccCceEEEecC------CCeEEEEEcccCCCCC
Confidence 45666553 4778888988877665532 1111 122222 5789987432 235788888652
Q ss_pred ceecCCCCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCC--CCCCCcceeEEE--ECCEEEE
Q 013929 204 SWSSGMRMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPS--MKNPRKMCSGVF--MDGKFYV 277 (433)
Q Consensus 204 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~~--~~g~lyv 277 (433)
....+.... .....++++ .++.||+.-. ....++++++....-+.+.. +..| .+.++ .+|.||+
T Consensus 149 ~~~~~~~~~-~~~p~glavD~~~~~lY~~d~------~~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 149 SYDTVISRD-IQAPDGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYW 218 (400)
T ss_dssp CCEEEECSS-CSCEEEEEEETTTTEEEEEET------TTTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEE
T ss_pred cceEEEeCC-CCCcccEEEEecCCceEEEEC------CCCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEE
Confidence 122221101 111233444 3789999842 24578899988765544421 2112 23444 3688998
Q ss_pred EccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCC
Q 013929 278 IGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 278 ~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~ 355 (433)
.--. ....|+++++....=+.+..- .. .++.++++. +++||+.......|+++|...
T Consensus 219 td~~------~~~~I~~~~~dG~~~~~~~~~--~l-------------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 219 TDWG------TPAKIKKGGLNGVDIYSLVTE--NI-------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EECS------SSCCEEEEETTSCSCEEEECS--SC-------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeCC------CCCEEEEEeCCCCccEEEEEC--CC-------------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 7311 123588888865432222110 00 011245554 689999988788999999986
Q ss_pred CcEEEeccCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 356 RLWFTIGRLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 356 ~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
..-+.+...+.... +..+++..++.||+.-
T Consensus 278 ~~~~~~~~~~~~l~----~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 278 GNRKTILEDEKRLA----HPFSLAVFEDKVFWTD 307 (400)
T ss_dssp CCCEEEEECSSTTS----SEEEEEEETTEEEEEE
T ss_pred CccEEEEeCCCCCC----CCEEEEEeCCEEEEec
Confidence 54444432111110 1245666889999876
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.38 Score=45.35 Aligned_cols=181 Identities=8% Similarity=-0.015 Sum_probs=86.7
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR 210 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 210 (433)
+|+.......+..||.....-..+.....+ -..+.. ++..++.++. ...+.+||..+++....-.
T Consensus 122 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTGALLNVLNFHRAP-------IVSVKWNKDGTHIISMDV------ENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCCSC-------EEEEEECTTSSEEEEEET------TCCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCCeEEEEeCCCCeeeeccCCCcc-------EEEEEECCCCCEEEEEec------CCeEEEEECCCCcEEEEee
Confidence 444444445677777444333333321111 111222 3444445443 2357889988776532211
Q ss_pred CCCCc--------------ceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcc-eeEEEE-CC
Q 013929 211 MNAPR--------------CLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKM-CSGVFM-DG 273 (433)
Q Consensus 211 ~p~~r--------------~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~-~g 273 (433)
.+... ....++.. ++. +++|+.+ ..+.+||..+..-... +...... ..++.. ++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK------GAIFVYQITEKTPTGK--LIGHHGPISVLEFNDTN 259 (425)
T ss_dssp CC---------------CCCBSCCEEEETTE-EEEECGG------GCEEEEETTCSSCSEE--ECCCSSCEEEEEEETTT
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC------CeEEEEEcCCCceeee--eccCCCceEEEEECCCC
Confidence 11111 02222333 444 5555533 4588999887642111 1111111 222222 56
Q ss_pred EEEEEccccCCCCcccceEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEE
Q 013929 274 KFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKY 351 (433)
Q Consensus 274 ~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~y 351 (433)
++++.|+.++ .+.+||+.+.+-.. +.... ... ..++.. ++ +++.++..+.+.+|
T Consensus 260 ~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~---~~i-------------~~~~~~~~~-~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 260 KLLLSASDDG-------TLRIWHGGNGNSQNCFYGHS---QSI-------------VSASWVGDD-KVISCSMDGSVRLW 315 (425)
T ss_dssp TEEEEEETTS-------CEEEECSSSBSCSEEECCCS---SCE-------------EEEEEETTT-EEEEEETTSEEEEE
T ss_pred CEEEEEcCCC-------EEEEEECCCCccceEecCCC---ccE-------------EEEEECCCC-EEEEEeCCCcEEEE
Confidence 6777776552 46888887654221 11111 110 123333 45 67777788999999
Q ss_pred eCCCCcEE
Q 013929 352 DKERRLWF 359 (433)
Q Consensus 352 d~~~~~W~ 359 (433)
|..+.+-.
T Consensus 316 d~~~~~~~ 323 (425)
T 1r5m_A 316 SLKQNTLL 323 (425)
T ss_dssp ETTTTEEE
T ss_pred ECCCCcEe
Confidence 99887633
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.04 E-value=0.41 Score=43.47 Aligned_cols=20 Identities=20% Similarity=0.351 Sum_probs=16.3
Q ss_pred EEEEEecCCCeEEEEeCCCC
Q 013929 337 ELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 337 ~ly~~gg~~~~i~~yd~~~~ 356 (433)
.+++.|+..+.|.+||..+.
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEEEETTSCEEEEEEEEC
T ss_pred eEEEEEcCCCeEEEEeCCCC
Confidence 67888888888999988764
No 105
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.99 E-value=0.11 Score=48.80 Aligned_cols=215 Identities=10% Similarity=0.026 Sum_probs=95.5
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCc-eecCCCCCCCcce
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNS-WSSGMRMNAPRCL 217 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r~~ 217 (433)
..+..||..++.|..+..+.... ..-..+.. ++..++.|+. ...+.+||..+++ |.....+......
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~~~~~~~~~~~~~~~ 102 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHD----KIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDGTWKQTLVLLRLNRA 102 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCS----SCEEEEEECTTTCCEEEEET------TSSEEEC------CCCCEEECCCCSSC
T ss_pred CEEEEEEccCCceEEEEEEecCC----ceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCCceeeeeEecccCCc
Confidence 34566788887777766554322 11111222 4556666653 2348889988877 5443322221112
Q ss_pred eeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC-eEEcCCCCC-CCcce-eEEE-ECCEEEEEccccCCCCcccce
Q 013929 218 FGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT-WKVLPSMKN-PRKMC-SGVF-MDGKFYVIGGIGGSDSKVLTC 291 (433)
Q Consensus 218 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~-~r~~~-~~~~-~~g~lyv~GG~~~~~~~~~~~ 291 (433)
...+.+ ++++++.|+.+ ..+.+||..+.. |..+..+.. ....- .++. -++++++.|+.++ .
T Consensus 103 v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-------~ 169 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-------K 169 (377)
T ss_dssp EEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS-------C
T ss_pred eEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC-------E
Confidence 222222 45666666644 347788887764 322222222 11111 2222 2567777777652 3
Q ss_pred EEEEECCCCceEecCCC-------CCC----CCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcE
Q 013929 292 GEEYDLETETWTEIPNM-------SPA----RGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 292 v~~yd~~t~~W~~~~~~-------p~~----r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
+.+||+.+......+.. +.. ...|. ..-..+.+ ++++++.|+..+.|.+||..+++-
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSG----------GWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCS----------SSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcccCC----------ceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 67788764432211100 000 00110 00012222 677777788888999999887652
Q ss_pred --EEeccCCCcccCCCcccEEEEEeCCEEEEEcCC
Q 013929 359 --FTIGRLPERANSMNGWGLAFRACGDRLIVIGGP 391 (433)
Q Consensus 359 --~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~ 391 (433)
..+..+...... ........++++++.|+.
T Consensus 240 ~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 240 PPRALITVKLSQLP---LRSLLWANESAIVAAGYN 271 (377)
T ss_dssp CEEECCCEECSSSC---EEEEEEEETTEEEEEESS
T ss_pred cceeeEeecCCCCc---eEEEEEcCCCCEEEEEcC
Confidence 223322222111 012222347787777753
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.99 E-value=0.055 Score=50.55 Aligned_cols=181 Identities=12% Similarity=0.136 Sum_probs=94.1
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC--CCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN--APRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
++.+++.||. ...+.+||..+++|.....+. ....-.+++. -++..++.|+.++ .+.+||..+..
T Consensus 27 ~g~~las~~~------D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~~ 94 (345)
T 3fm0_A 27 AGTLLASCGG------DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQDD 94 (345)
T ss_dssp TSSCEEEEET------TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC-
T ss_pred CCCEEEEEcC------CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCCC
Confidence 4455555554 234788888888774322111 1111122222 2566677777553 36778877776
Q ss_pred eEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCc-eEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 253 WKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETET-WTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 253 W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
++.+..+......-..+.+ ++++++.|+.++ .+.+||+.+.. +..+..+....... .
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-------~v~iwd~~~~~~~~~~~~~~~h~~~v-------------~ 154 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-------SVWVWEVDEEDEYECVSVLNSHTQDV-------------K 154 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEEECTTSCEEEEEEECCCCSCE-------------E
T ss_pred eEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-------eEEEEECCCCCCeEEEEEecCcCCCe-------------E
Confidence 6554333322222222222 577777777662 46778876642 32222111111110 0
Q ss_pred EEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCC
Q 013929 330 LVAV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPK 392 (433)
Q Consensus 330 ~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~ 392 (433)
.++. -++.+++.|+..+.|..||..++.|..+..+...... -.+++. .++++++.|+.+
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~----v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHEST----VWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECTTSSEEEEEETT
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc----eEEEEECCCCCEEEEEeCC
Confidence 1121 2567777888888999999999988766555433211 122222 356666677653
No 107
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.99 E-value=0.82 Score=41.97 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=55.5
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
+.+++.|+. ...+.+||..+++-.. +.. ....-.+++.. ++.+++.|+.+ ..+.+||..+.+-
T Consensus 85 ~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~ 150 (366)
T 3k26_A 85 HPLLAVAGS------RGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEEEET------TCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTTTEE
T ss_pred CCEEEEecC------CCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeecCeE
Confidence 567777764 2358899988765322 111 11111222222 55677777654 3488999988754
Q ss_pred EE-cCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 254 KV-LPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 254 ~~-~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
.. +..+......-..+.+ ++..++.|+.++ .+.+||+.+.+
T Consensus 151 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~ 194 (366)
T 3k26_A 151 VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-------SLKLWRINSKR 194 (366)
T ss_dssp EEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-------CEEEEESCSHH
T ss_pred EEEecccccccCceeEEEECCCCCEEEEecCCC-------CEEEEECCCCc
Confidence 33 2221222222222222 466777777652 47889987653
No 108
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.96 E-value=0.57 Score=43.30 Aligned_cols=185 Identities=12% Similarity=0.142 Sum_probs=91.0
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCce--ecCCCCCC-CcceeeEE-EeCCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSW--SSGMRMNA-PRCLFGSA-SLGEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~~~p~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++..++.||. ...+.+||..+..- +....+.. ...-.++. .-++. ++.|+.+ ..+.+||..+.
T Consensus 108 ~~~~l~s~~~------d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d------~~i~~wd~~~~ 174 (340)
T 1got_B 108 SGNYVACGGL------DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD------TTCALWDIETG 174 (340)
T ss_dssp TSSEEEEEET------TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT------SCEEEEETTTT
T ss_pred CCCEEEEEeC------CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC------CcEEEEECCCC
Confidence 4555666654 24578888876531 11111111 11111222 22555 4455433 35888998887
Q ss_pred CeEEcCCCCCCCcce-eEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 252 TWKVLPSMKNPRKMC-SGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~-~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
.-... +......- +++. -++++++.|+.++ .+..||+.+..-... +....... .
T Consensus 175 ~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~-------~v~~wd~~~~~~~~~--~~~h~~~v-------------~ 230 (340)
T 1got_B 175 QQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA-------SAKLWDVREGMCRQT--FTGHESDI-------------N 230 (340)
T ss_dssp EEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCSEEEE--ECCCSSCE-------------E
T ss_pred cEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC-------cEEEEECCCCeeEEE--EcCCcCCE-------------E
Confidence 53221 11111111 2222 2567777877663 478899887653221 11000000 0
Q ss_pred EEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 330 LVAV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 330 ~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+++. -++.+++.|+..+.|..||..+++-...-..+..... -.+++ ..++++++.|+.+. .+.+|+..
T Consensus 231 ~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~----v~~~~~s~~g~~l~~g~~d~------~i~vwd~~ 300 (340)
T 1got_B 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG----ITSVSFSKSGRLLLAGYDDF------NCNVWDAL 300 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC----EEEEEECTTSSEEEEEETTS------EEEEEETT
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccc----eEEEEECCCCCEEEEECCCC------eEEEEEcc
Confidence 1222 2677788888889999999988753322111111100 02222 23577777776532 36777764
No 109
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.94 E-value=0.16 Score=45.16 Aligned_cols=190 Identities=8% Similarity=-0.084 Sum_probs=95.7
Q ss_pred cceEEEEecCC-CcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCccee
Q 013929 140 LLEWEAFDPIR-RRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLF 218 (433)
Q Consensus 140 ~~~~~~yd~~~-~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~ 218 (433)
...++.+|..+ .+...+.......... ......+++.+++++... .....++.+|..+++.+.+..... ..
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~---~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~---~~ 132 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGFATICNN---DHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKNLP---SY 132 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTTCCCBCS---CCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSSSS---EE
T ss_pred CCeEEEEeCCCCCCceEecccccccccc---ceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecCCC---cc
Confidence 45688899988 7776665333211111 111222454444443211 134568999988877655543221 22
Q ss_pred eEEEe-CC-EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEcc-ccCCCCcccceEEE
Q 013929 219 GSASL-GE-IAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGG-IGGSDSKVLTCGEE 294 (433)
Q Consensus 219 ~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG-~~~~~~~~~~~v~~ 294 (433)
.++.. ++ .|++.++.++ ...++.+|..+.....+...+.. ...... -+++.+++++ .+ ....++.
T Consensus 133 ~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~-----~~~~i~~ 201 (297)
T 2ojh_A 133 WHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEGR--NDGPDYSPDGRWIYFNSSRT-----GQMQIWR 201 (297)
T ss_dssp EEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSSC--EEEEEECTTSSEEEEEECTT-----SSCEEEE
T ss_pred ceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCCc--cccceECCCCCEEEEEecCC-----CCccEEE
Confidence 22222 34 5555554332 24677788888777666543221 112222 2555444433 23 1345777
Q ss_pred EECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecC-----------CCeEEEEeCCCCcEEEec
Q 013929 295 YDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYA-----------DMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 295 yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~-----------~~~i~~yd~~~~~W~~v~ 362 (433)
+++.+.....+........ .+.. -+++.+++++. ...++.||..+++...+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~----------------~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 202 VRVDGSSVERITDSAYGDW----------------FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EETTSSCEEECCCCSEEEE----------------EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred ECCCCCCcEEEecCCcccC----------------CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 8877777766643221100 1111 24544433322 156999999998876665
Q ss_pred cC
Q 013929 363 RL 364 (433)
Q Consensus 363 ~l 364 (433)
.+
T Consensus 266 ~~ 267 (297)
T 2ojh_A 266 DL 267 (297)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.92 E-value=0.25 Score=49.46 Aligned_cols=237 Identities=12% Similarity=-0.029 Sum_probs=115.1
Q ss_pred EEEEee-ccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-EC-CEEEEECCCCCCcccceeEEEEEc--CCCceec
Q 013929 133 WVYFSC-HLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VG-TELLVFGRELTAHHISHVIYRYSI--LTNSWSS 207 (433)
Q Consensus 133 ~l~~~~-~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~--~t~~W~~ 207 (433)
.+|+.. ....+.++|..+.+-...-..... .+.++. -+ ..+|+.+. .+.+.+||+ .+.+-
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~------~~~v~~spdg~~l~v~~~-------d~~V~v~D~~~~t~~~-- 214 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA------VHISRMSASGRYLLVIGR-------DARIDMIDLWAKEPTK-- 214 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT------EEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCEE--
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc------cceEEECCCCCEEEEECC-------CCeEEEEECcCCCCcE--
Confidence 455543 346788999988765322111111 111222 23 46666652 156999999 56543
Q ss_pred CCCCCCCcceeeEEEe-----CC-EEEEEccCCCCCCcCCceEEEeCCCCCeEE-cCC--C--------CCCCcceeEEE
Q 013929 208 GMRMNAPRCLFGSASL-----GE-IAILAGGSDLEGNILSSAEMYNSETQTWKV-LPS--M--------KNPRKMCSGVF 270 (433)
Q Consensus 208 ~~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~--~--------p~~r~~~~~~~ 270 (433)
+..++.......++.. ++ ++|+.... ...+.++|..+.+-.. ++. + +.+|.......
T Consensus 215 ~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 215 VAEIKIGIEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EEEEecCCCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEEC
Confidence 2222222222333332 34 56665321 2557888988765322 211 1 11121111112
Q ss_pred E-CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCE-EEEEecCCCeE
Q 013929 271 M-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNE-LYAADYADMEV 348 (433)
Q Consensus 271 ~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~-ly~~gg~~~~i 348 (433)
- ++.+|+.... ...+.++|..+..-..+..++..+.-+ .....-+++ +|+.+...+.|
T Consensus 289 ~~~~~~~vs~~~-------~g~i~vvd~~~~~~l~~~~i~~~~~~~-------------~~~~spdg~~l~va~~~~~~v 348 (543)
T 1nir_A 289 HEHPEFIVNVKE-------TGKVLLVNYKDIDNLTVTSIGAAPFLH-------------DGGWDSSHRYFMTAANNSNKV 348 (543)
T ss_dssp SSSSEEEEEETT-------TTEEEEEECTTSSSCEEEEEECCSSCC-------------CEEECTTSCEEEEEEGGGTEE
T ss_pred CCCCEEEEEECC-------CCeEEEEEecCCCcceeEEeccCcCcc-------------CceECCCCCEEEEEecCCCeE
Confidence 2 3445554322 246788888765321111111111111 112223455 56665567889
Q ss_pred EEEeCCCCcEEEec---cCCCcccCCCcccEEEEEe-CCEEEEEcCCCCCCCCeeEEEEeecCCCC---CCceEecccC
Q 013929 349 RKYDKERRLWFTIG---RLPERANSMNGWGLAFRAC-GDRLIVIGGPKASGEGFIELNSWVPSEGP---PQWNLLARKQ 420 (433)
Q Consensus 349 ~~yd~~~~~W~~v~---~lp~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~---~~W~~v~~~p 420 (433)
.++|.++++-...- ..|.+. .+..+..- ++.+|+.+...+ ..+.+|+.+... ..|+.+..++
T Consensus 349 ~v~D~~tg~l~~~i~~g~~ph~g-----~g~~~~~p~~g~~~~s~~~~d-----~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 349 AVIDSKDRRLSALVDVGKTPHPG-----RGANFVHPKYGPVWSTSHLGD-----GSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEEETTTTEEEEEEECSSSBCCT-----TCEEEEETTTEEEEEEEBSSS-----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEEECCCCeEEEeeccCCCCCCC-----CCcccCCCCCccEEEeccCCC-----ceEEEEEeCCCCCchhcCeEEEEEE
Confidence 99999998654332 223221 23444333 378888774322 247788886522 2488876654
No 111
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.91 E-value=0.85 Score=40.46 Aligned_cols=186 Identities=10% Similarity=-0.054 Sum_probs=100.6
Q ss_pred EEEEee-ccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCC
Q 013929 133 WVYFSC-HLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGM 209 (433)
Q Consensus 133 ~l~~~~-~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 209 (433)
.||+.. ....+.+||+....-..+..... ...+.++.. ++.||+.-.. .+.+.++|+....-+.+.
T Consensus 49 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-----~~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~ 117 (267)
T 1npe_A 49 VVYWTDISEPSIGRASLHGGEPTTIIRQDL-----GSPEGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRVLF 117 (267)
T ss_dssp EEEEEETTTTEEEEEESSSCCCEEEECTTC-----CCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEE
T ss_pred EEEEEECCCCEEEEEecCCCCcEEEEECCC-----CCccEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEEEE
Confidence 455443 34578889887654322211110 011223332 5789988532 346888998654333221
Q ss_pred CCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCC
Q 013929 210 RMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSD 285 (433)
Q Consensus 210 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~ 285 (433)
..... ....+++. +++||+..... ....++++++....-+.+..... ....+.++- +++||+.-.
T Consensus 118 ~~~~~-~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~----- 186 (267)
T 1npe_A 118 DTGLV-NPRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDA----- 186 (267)
T ss_dssp CSSCS-SEEEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEET-----
T ss_pred ECCCC-CccEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEEC-----
Confidence 11111 11233333 68999985321 13568888876544333322111 122333443 578999832
Q ss_pred CcccceEEEEECCCCceEecC-CCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 286 SKVLTCGEEYDLETETWTEIP-NMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 286 ~~~~~~v~~yd~~t~~W~~~~-~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
..+.|.+||+....-..+. ... .+.+++..++.||+.....+.|.++|+.+++-.
T Consensus 187 --~~~~I~~~~~~g~~~~~~~~~~~-----------------~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 187 --GTHRAECLNPAQPGRRKVLEGLQ-----------------YPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp --TTTEEEEEETTEEEEEEEEECCC-----------------SEEEEEEETTEEEEEETTTTEEEEEETTTTEEE
T ss_pred --CCCEEEEEecCCCceEEEecCCC-----------------CceEEEEeCCEEEEEECCCCeEEEEeCCCCCce
Confidence 2357889998764322221 111 112566678999999877789999999887654
No 112
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.87 E-value=0.21 Score=46.99 Aligned_cols=173 Identities=8% Similarity=0.004 Sum_probs=91.2
Q ss_pred eEEEEEcCCCceecCCCC-CCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcc-eeEE
Q 013929 194 VIYRYSILTNSWSSGMRM-NAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKM-CSGV 269 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~ 269 (433)
.+.+||..+++....-.. .....-.+++.. ++.+++.|+.+ ..+.+||..+.....+......... ..++
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEECCCCSSCCEEEEE
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEeccCCCCCCeEEEE
Confidence 588999988876544332 122222333333 34666676644 3588899987666555432211111 1222
Q ss_pred -EECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCE-EEEEecCCC
Q 013929 270 -FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNE-LYAADYADM 346 (433)
Q Consensus 270 -~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~-ly~~gg~~~ 346 (433)
.-++++++.|+.+ ..+.+||+....-..+.... ... .+++.. ++. +++.|+..+
T Consensus 171 ~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~h~---~~v-------------~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 171 VSVSRQMLATGDST-------GRLLLLGLDGHEIFKEKLHK---AKV-------------THAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp EETTTTEEEEEETT-------SEEEEEETTSCEEEEEECSS---SCE-------------EEEEECSSCTTEEEEEETTS
T ss_pred ECCCCCEEEEECCC-------CCEEEEECCCCEEEEeccCC---CcE-------------EEEEECCCCCCEEEEEeCCC
Confidence 2356677777655 35788998544333332111 110 012222 344 778888889
Q ss_pred eEEEEeCCC----CcEEEeccCCCcccCCCcccEEEEE-e-CCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 347 EVRKYDKER----RLWFTIGRLPERANSMNGWGLAFRA-C-GDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 347 ~i~~yd~~~----~~W~~v~~lp~~~~~~~~~~~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
.|.+||..+ ............. .+++. . ++++++.|+.+ ..+.+|++..
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~~l~~~~~d------~~i~iwd~~~ 282 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEMPHEKPV-------NAAYFNPTDSTKLLTTDQR------NEIRVYSSYD 282 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEEECSSCE-------EEEEECTTTSCEEEEEESS------SEEEEEETTB
T ss_pred EEEEEeCCCCCcccceEEEecCCCce-------EEEEEcCCCCCEEEEEcCC------CcEEEEECCC
Confidence 999999987 3333222111111 22332 2 56777777653 2467777754
No 113
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.86 E-value=0.035 Score=52.19 Aligned_cols=150 Identities=15% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC-
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT- 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~- 252 (433)
++.+++.|+. ...+.+||..++.|+.+..+.........+.+ ++.+++.|+.+ ..+.+||..+..
T Consensus 22 ~g~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 22 QRTEFVTTTA------TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGT 89 (377)
T ss_dssp SSSEEECCCS------SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------C
T ss_pred CCCEEEEecC------CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCc
Confidence 4556666654 23478899999888776665433222222222 55666776654 348888888876
Q ss_pred eEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCc-eEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 253 WKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETET-WTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 253 W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
|.....+.........+.+ ++++++.|+.++ .+.+||+.+.. |..+..+..+.... -.
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~~~~~~~~h~~~------------v~ 150 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-------VISVCYFEQENDWWVSKHLKRPLRST------------IL 150 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-------CEEECCC-----CCCCEEECSSCCSC------------EE
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCC-------eEEEEEECCcccceeeeEeecccCCC------------eE
Confidence 4333222222222222222 566777776652 36778887764 33332222111110 00
Q ss_pred EEEEE-CCEEEEEecCCCeEEEEeCCCC
Q 013929 330 LVAVV-NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 330 ~~~~~-~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
.++.. ++.+++.|+..+.+..||..++
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 12222 5677788888889999998643
No 114
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.86 E-value=0.49 Score=43.67 Aligned_cols=206 Identities=12% Similarity=0.055 Sum_probs=101.6
Q ss_pred eccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC----
Q 013929 138 CHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA---- 213 (433)
Q Consensus 138 ~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---- 213 (433)
.....++.||+.+++...+. .+... .......++.+++... ..+++||+.+++.+.+...+.
T Consensus 68 ~~~~~i~~~d~~~~~~~~~~-~~~~v-----~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~~~~~~~~~~~~~~ 133 (326)
T 2ghs_A 68 ILERELHELHLASGRKTVHA-LPFMG-----SALAKISDSKQLIASD--------DGLFLRDTATGVLTLHAELESDLPG 133 (326)
T ss_dssp GGGTEEEEEETTTTEEEEEE-CSSCE-----EEEEEEETTEEEEEET--------TEEEEEETTTCCEEEEECSSTTCTT
T ss_pred CCCCEEEEEECCCCcEEEEE-CCCcc-----eEEEEeCCCeEEEEEC--------CCEEEEECCCCcEEEEeeCCCCCCC
Confidence 34467889999887655432 12111 0111234678877642 248999999998876543321
Q ss_pred CcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CC-EEEEEccccCCCCcccce
Q 013929 214 PRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DG-KFYVIGGIGGSDSKVLTC 291 (433)
Q Consensus 214 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~lyv~GG~~~~~~~~~~~ 291 (433)
.+.....+.-++++|+.............+++|| +++.+.+.. ......+.+.. ++ .+|+.... ...
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~-------~~~ 202 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK-------VNR 202 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT-------TCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC-------CCE
Confidence 1222222223677877432111111245788898 455544321 00111222322 45 57776322 246
Q ss_pred EEEEECC--CC-c------eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 292 GEEYDLE--TE-T------WTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 292 v~~yd~~--t~-~------W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
+++||.. ++ . +..+... .. .+..++. -+|.||+.....+.|.+||+....-..+
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~----~~------------~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGI----KG------------GMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARY 266 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTS----SS------------EEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCC----CC------------CCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEE
Confidence 7889875 44 2 2221100 00 0012332 2578888765557899999955443333
Q ss_pred ccCCCcccCCCcccEEEEEe---CCEEEEEcCC
Q 013929 362 GRLPERANSMNGWGLAFRAC---GDRLIVIGGP 391 (433)
Q Consensus 362 ~~lp~~~~~~~~~~~~~~~~---~~~l~v~GG~ 391 (433)
.+|.... .+++.. ++.||+....
T Consensus 267 -~~~~~~~------~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 267 -EVPGKQT------TCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp -ECSCSBE------EEEEEESTTSCEEEEEEBC
T ss_pred -ECCCCCc------EEEEEecCCCCEEEEEecC
Confidence 2343221 223322 2578876544
No 115
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.85 E-value=0.6 Score=48.88 Aligned_cols=208 Identities=8% Similarity=-0.072 Sum_probs=109.0
Q ss_pred EeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCC--C
Q 013929 136 FSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRM--N 212 (433)
Q Consensus 136 ~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~--p 212 (433)
+.+...-+..||+.+.++..... +..... ..-.+++.. ++.|++-. ...-+++||+.+++++..... +
T Consensus 378 igt~~~Gl~~~~~~~~~~~~~~~-~~~~~~-~~v~~i~~d~~g~lWigt-------~~~Gl~~~~~~~~~~~~~~~~~~~ 448 (781)
T 3v9f_A 378 IGTDGGGINVFENGKRVAIYNKE-NRELLS-NSVLCSLKDSEGNLWFGT-------YLGNISYYNTRLKKFQIIELEKNE 448 (781)
T ss_dssp EEEBSSCEEEEETTEEEEECC------CCC-SBEEEEEECTTSCEEEEE-------TTEEEEEECSSSCEEEECCSTTTC
T ss_pred EEeCCCcEEEEECCCCeEEEccC-CCCCCC-cceEEEEECCCCCEEEEe-------ccCCEEEEcCCCCcEEEeccCCCC
Confidence 33334457788888776665421 111000 000112222 56777631 123589999999999876532 2
Q ss_pred CCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCC---CCcceeEEEE--CCEEEEEccccCCCC
Q 013929 213 APRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKN---PRKMCSGVFM--DGKFYVIGGIGGSDS 286 (433)
Q Consensus 213 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---~r~~~~~~~~--~g~lyv~GG~~~~~~ 286 (433)
.. .-.+++.. ++.|++.. ...+++||+.+++|+.....+. .......... +|.|++.. ..
T Consensus 449 ~~-~v~~i~~d~~g~lwigt--------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~---- 514 (781)
T 3v9f_A 449 LL-DVRVFYEDKNKKIWIGT--------HAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-FG---- 514 (781)
T ss_dssp CC-CEEEEEECTTSEEEEEE--------TTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-SS----
T ss_pred CC-eEEEEEECCCCCEEEEE--------CCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-cC----
Confidence 21 12223332 56877752 1458999999998876543221 0111112222 56676642 21
Q ss_pred cccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeE-EEEeCCCCcEEEec--
Q 013929 287 KVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEV-RKYDKERRLWFTIG-- 362 (433)
Q Consensus 287 ~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i-~~yd~~~~~W~~v~-- 362 (433)
..+.+||+.+++++.+.....-.... -.+++. .+|.|++-.. +.+ .+||+++++++...
T Consensus 515 ---~Gl~~~~~~~~~~~~~~~~~~l~~~~------------i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~~~~~~~~~ 577 (781)
T 3v9f_A 515 ---GGVGIYTPDMQLVRKFNQYEGFCSNT------------INQIYRSSKGQMWLATG--EGLVCFPSARNFDYQVFQRK 577 (781)
T ss_dssp ---SCEEEECTTCCEEEEECTTTTCSCSC------------EEEEEECTTSCEEEEET--TEEEEESCTTTCCCEEECGG
T ss_pred ---CCEEEEeCCCCeEEEccCCCCCCCCe------------eEEEEECCCCCEEEEEC--CCceEEECCCCCcEEEcccc
Confidence 12688999999888765311000110 002222 2577777543 567 99999999887764
Q ss_pred -cCCCcccCCCcccEEEEE-eCCEEEEEc
Q 013929 363 -RLPERANSMNGWGLAFRA-CGDRLIVIG 389 (433)
Q Consensus 363 -~lp~~~~~~~~~~~~~~~-~~~~l~v~G 389 (433)
.+|.... .+++. -+|+|++.+
T Consensus 578 ~gl~~~~i------~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 578 EGLPNTHI------RAISEDKNGNIWAST 600 (781)
T ss_dssp GTCSCCCC------CEEEECSSSCEEEEC
T ss_pred CCCCCceE------EEEEECCCCCEEEEc
Confidence 2433221 23333 367888775
No 116
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.83 E-value=1.2 Score=46.69 Aligned_cols=209 Identities=13% Similarity=0.061 Sum_probs=112.1
Q ss_pred cEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCC----ce
Q 013929 132 HWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTN----SW 205 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W 205 (433)
++|++. ....+..++.....+..+..... ...+++.. ++.||+.-.. .+.++++++... ..
T Consensus 396 p~Ll~a-n~~~Ir~i~l~~~~~~~l~~~~~------~~~gl~~d~~~~~lY~sD~~------~~~I~~~~l~g~~~~~~~ 462 (791)
T 3m0c_C 396 AYLFFT-NRHEVRKMTLDRSEYTSLIPNLR------NVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSY 462 (791)
T ss_dssp CEEEEE-CBSSEEEECTTSCCCEEEECSCS------SEEEEEEETTTTEEEEEETT------TTEEEEEEC--------C
T ss_pred cccccc-cccceeEeeccCCcceeeecCCC------ceEEEeecccCCeeEEeecc------ceeEEEEeccCCCCCcce
Confidence 345443 34567777777666655432111 01122222 5788887532 235777777642 22
Q ss_pred ec-CC-CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC--CCCCCCcceeEEE--ECCEEEE
Q 013929 206 SS-GM-RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP--SMKNPRKMCSGVF--MDGKFYV 277 (433)
Q Consensus 206 ~~-~~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~g~lyv 277 (433)
.. +. .+..| .++++ .+++||+.- .....|+++++....-+.+. .+..| .++++ .+|.||+
T Consensus 463 ~~vi~~~l~~P---~GLAvD~~~~~LY~tD------~~~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 463 DTVISRDIQAP---DGLAVDWIHSNIYWTD------SVLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYW 530 (791)
T ss_dssp EEEECSSCSCC---CEEEEETTTTEEEEEE------TTTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEE
T ss_pred eEEEecCCCCc---ceeeeeecCCcEEEEe------cCCCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEE
Confidence 22 22 22222 23333 477999983 23467999999876655442 22222 23444 3589999
Q ss_pred EccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCC
Q 013929 278 IGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 278 ~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~ 355 (433)
.--. ....|+++++....-+.+..- .. .++.++++- +++||+.......|+++|+..
T Consensus 531 tD~g------~~~~I~~~~~dG~~~~~lv~~--~l-------------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 531 TDWG------TPAKIKKGGLNGVDIYSLVTE--NI-------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EECS------SSCEEEEEETTSCCEEEEECS--SC-------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ecCC------CCCeEEEEecCCCceEEEEeC--CC-------------CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 8311 124688888875543333210 00 011245544 789999987788999999976
Q ss_pred CcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 356 RLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 356 ~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
..=+.+..-..... +..+++..+++||+.--
T Consensus 590 ~~~~~v~~~~~~l~----~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 590 GNRKTILEDEKRLA----HPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp CSCEEEEECTTTTS----SEEEEEEETTEEEEEET
T ss_pred CceEEEecCCCccC----CCCEEEEeCCEEEEEEC
Confidence 54333322111110 12566678899998864
No 117
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.82 E-value=1.6 Score=44.23 Aligned_cols=118 Identities=16% Similarity=0.173 Sum_probs=69.7
Q ss_pred EEECCEEEEECCCCCCcccceeEEEEEc-CCCc--eecCCCCCCC-----c---ceeeEEE--eCCE----EEEEccCCC
Q 013929 173 LAVGTELLVFGRELTAHHISHVIYRYSI-LTNS--WSSGMRMNAP-----R---CLFGSAS--LGEI----AILAGGSDL 235 (433)
Q Consensus 173 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~~--W~~~~~~p~~-----r---~~~~~~~--~~~~----iyv~GG~~~ 235 (433)
++.++.||+.... .+.++.+|. .+++ |+.-...+.. + .....++ .+++ ||+...
T Consensus 59 ~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 59 LVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp EEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred EEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 6679999998752 235899999 7875 8764432211 1 1123455 5777 887632
Q ss_pred CCCcCCceEEEeCCCCC--eEEcC-CCCCC-CcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCc--eEec
Q 013929 236 EGNILSSAEMYNSETQT--WKVLP-SMKNP-RKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEI 305 (433)
Q Consensus 236 ~~~~~~~~~~yd~~t~~--W~~~~-~~p~~-r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~ 305 (433)
-..++.+|..+++ |+.-. ..... ....+.++.++++|+-.+.. +......+..||.+|++ |+.-
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~--e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGA--ELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCG--GGTCCCEEEEEETTTCCEEEEEE
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccc--ccCCCCeEEEEECCCCcEEEEEc
Confidence 2468999999886 87532 21111 11223456789887753211 00123468999999875 8754
No 118
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.82 E-value=0.61 Score=47.46 Aligned_cols=157 Identities=10% Similarity=-0.069 Sum_probs=81.1
Q ss_pred ceeEEEEEcCC------CceecCC-CCCCCcceeeEEEeCCEEEEEccCCCCCC--cCCceEEEeCC-CCC---eEEcCC
Q 013929 192 SHVIYRYSILT------NSWSSGM-RMNAPRCLFGSASLGEIAILAGGSDLEGN--ILSSAEMYNSE-TQT---WKVLPS 258 (433)
Q Consensus 192 ~~~~~~yd~~t------~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~-t~~---W~~~~~ 258 (433)
...++++|..+ ++.+.+. .-+ ........+-+++.+++...+.... ....++++|.. ++. .+.+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 35799999988 6666554 221 1111122233554444443332111 13579999998 563 333322
Q ss_pred CCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CC
Q 013929 259 MKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NN 336 (433)
Q Consensus 259 ~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~ 336 (433)
-. .......+. -+|++|+.+..++ ...++.+|+.+++++.+......... +........++.. ++
T Consensus 239 ~~-~~~~~~~~~spdg~l~~~~~~~~-----~~~l~~~~~~~~~~~~l~~~~~~~~~-------p~w~~~~~~~~~~~~~ 305 (662)
T 3azo_A 239 GP-EEAIAQAEWAPDGSLIVATDRTG-----WWNLHRVDPATGAATQLCRREEEFAG-------PLWTPGMRWFAPLANG 305 (662)
T ss_dssp ET-TBCEEEEEECTTSCEEEEECTTS-----SCEEEEECTTTCCEEESSCCSSBSSC-------CCCSTTCCSEEECTTS
T ss_pred CC-CceEcceEECCCCeEEEEECCCC-----CeEEEEEECCCCceeecccccccccC-------ccccccCceEeEeCCC
Confidence 11 111122222 3778777765442 23689999989999887543221110 0000000123333 67
Q ss_pred EEEEEecC-CCeEEEEeCCCCcEEEec
Q 013929 337 ELYAADYA-DMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 337 ~ly~~gg~-~~~i~~yd~~~~~W~~v~ 362 (433)
++++.+.. ...++.+|..+++.+.+.
T Consensus 306 ~~~~~~~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 306 LIAVVHGKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp CEEEEEBSSSCEEEEEETTTTEEEECC
T ss_pred EEEEEEEcCccEEEEEECCCCcEEEec
Confidence 77776644 335677798888876664
No 119
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.82 E-value=0.34 Score=45.50 Aligned_cols=111 Identities=13% Similarity=0.072 Sum_probs=57.4
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEc-CCCCCC---CcceeEEEE--CCEEEEEccccCCCCcccceEEEEEC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVL-PSMKNP---RKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~---r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
++ +++.|+.+ ..+.+||..+..-... ...... ...-..+.+ ++++++.|+.++ ....+.+||+
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~----~~g~i~i~d~ 265 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN----SFGCITLYET 265 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET----TEEEEEEEET
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC----CCceEEEEEC
Confidence 45 66666543 4588999987653221 110001 111222222 566777766541 1145788998
Q ss_pred CCCceEe-cCCCCC-C--------CCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcE
Q 013929 298 ETETWTE-IPNMSP-A--------RGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 298 ~t~~W~~-~~~~p~-~--------r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
.+.+-.. +...+. . .... -..+.. ++.+++.|+..+.|.+||..+.+-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSW-------------VMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSC-------------EEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCCcccceeccCcccccccccccccCCc-------------EEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 8765322 211000 0 0110 012222 577777888889999999988753
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.75 Score=44.35 Aligned_cols=150 Identities=5% Similarity=-0.034 Sum_probs=75.1
Q ss_pred EEEEECCCCCCcccceeEEEEEcC--CCceec-CCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 178 ELLVFGRELTAHHISHVIYRYSIL--TNSWSS-GMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 178 ~iyv~GG~~~~~~~~~~~~~yd~~--t~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
.|++.|+. ...+.+||.. +++... +.....+....+++.. ++..++.|+.+ ..++.++..+..-
T Consensus 116 ~l~~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~------g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 116 RLIACADS------DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF------GDVYSIDINSIPE 183 (450)
T ss_dssp EEEEEEGG------GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTSCCC
T ss_pred EEEEEECC------CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC------CcEEEEecCCccc
Confidence 45567654 2357888887 544322 1100111111122222 55555666532 4478888776543
Q ss_pred EE--cCCCCCCCcc-eeEE-EEC---CEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 254 KV--LPSMKNPRKM-CSGV-FMD---GKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 254 ~~--~~~~p~~r~~-~~~~-~~~---g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
.. +..+...... ..++ .-+ +++++.|+.+ ..+.+||+.+......- + ......
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~-~-~~h~~~----------- 243 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-------EHIKISHYPQCFIVDKW-L-FGHKHF----------- 243 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-------SCEEEEEESCTTCEEEE-C-CCCSSC-----------
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-------CcEEEEECCCCceeeee-e-cCCCCc-----------
Confidence 21 1111111111 1222 345 7788887765 24788888776532210 0 000010
Q ss_pred CCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 327 APPLVAVVNNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 327 ~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
-..++..++.+++.|+..+.|.+||..+++-..
T Consensus 244 -v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 244 -VSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLS 276 (450)
T ss_dssp -EEEEEECSTTEEEEEESSSEEEEEETTTCCEEE
T ss_pred -eEEEEECCCCEEEEEeCCCeEEEEECCCCcEee
Confidence 001222278888888888999999999886543
No 121
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.81 E-value=0.29 Score=45.02 Aligned_cols=221 Identities=11% Similarity=-0.014 Sum_probs=112.7
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCc------------c--ccccCCceEEEE--CCEEEEECCCCCCcccceeEE
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSN------------E--CFMCSDKESLAV--GTELLVFGRELTAHHISHVIY 196 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~------------~--~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 196 (433)
.+|+......++.||+...++..+...... . ........++.. ++.|||.... ..+.
T Consensus 32 ~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-------~~i~ 104 (322)
T 2fp8_A 32 GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-------YHLS 104 (322)
T ss_dssp SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------TEEE
T ss_pred EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-------CCEE
Confidence 456655566788999988777654311100 0 000011233444 5789987422 2378
Q ss_pred EEEcCCCceecCCCCCCC---cceeeEEEe--CCEEEEEccCCCC-----------CCcCCceEEEeCCCCCeEEcCC-C
Q 013929 197 RYSILTNSWSSGMRMNAP---RCLFGSASL--GEIAILAGGSDLE-----------GNILSSAEMYNSETQTWKVLPS-M 259 (433)
Q Consensus 197 ~yd~~t~~W~~~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~-----------~~~~~~~~~yd~~t~~W~~~~~-~ 259 (433)
+||+.+++.+.+...... .....+++. ++.|||.-..... ......+++||+.+...+.+.. +
T Consensus 105 ~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~ 184 (322)
T 2fp8_A 105 VVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL 184 (322)
T ss_dssp EECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC
Confidence 899887766544321111 111233333 5789987422100 0112568999998876654321 1
Q ss_pred CCCCcceeEEEE-CC-EEEEEccccCCCCcccceEEEEECCCC---ceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-
Q 013929 260 KNPRKMCSGVFM-DG-KFYVIGGIGGSDSKVLTCGEEYDLETE---TWTEIPNMSPARGGAARGTEMPASAEAPPLVAV- 333 (433)
Q Consensus 260 p~~r~~~~~~~~-~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~---~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~- 333 (433)
. .....++. +| .||+.-. ....|.+||+... ..+.+..++. - ..+++
T Consensus 185 ~---~p~gia~~~dg~~lyv~d~-------~~~~I~~~~~~~~~~~~~~~~~~~~g---P--------------~gi~~d 237 (322)
T 2fp8_A 185 H---VPGGAEVSADSSFVLVAEF-------LSHQIVKYWLEGPKKGTAEVLVKIPN---P--------------GNIKRN 237 (322)
T ss_dssp S---CCCEEEECTTSSEEEEEEG-------GGTEEEEEESSSTTTTCEEEEEECSS---E--------------EEEEEC
T ss_pred c---cCcceEECCCCCEEEEEeC-------CCCeEEEEECCCCcCCccceEEeCCC---C--------------CCeEEC
Confidence 1 11233333 34 5888732 2246889998753 3333222211 0 12333
Q ss_pred ECCEEEEEecC----------CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 334 VNNELYAADYA----------DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 334 ~~~~ly~~gg~----------~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
-+|.||+.... .+.|.+||+....-..+. .|.... .. ...+++..+++|||.+.
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~-~~-~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFA-GE-HFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTT-TS-CCCEEEEETTEEEEECS
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE-CCCCCc-cc-cceEEEEeCCEEEEeec
Confidence 25789987543 457999999755444443 232110 00 11334456899998764
No 122
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.80 E-value=0.11 Score=47.97 Aligned_cols=198 Identities=15% Similarity=0.092 Sum_probs=99.4
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCC-----------cccceeEEEEE
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTA-----------HHISHVIYRYS 199 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~-----------~~~~~~~~~yd 199 (433)
.||++.....+..||+.+.....+........+. ....+++. ++.||+.-..... ......+++||
T Consensus 93 ~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~-~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 93 QLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFK-WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EEEEEETTTEEEEECTTCEECEEEESEETTEECS-CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred cEEEEECCCCEEEEeCCCCEEEEecccCCCCccc-ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 4555544455788888766554443211111010 11123332 5688886422100 01235699999
Q ss_pred cCCCceecCC-CCCCCcceeeEEEe-C-CEEEEEccCCCCCCcCCceEEEeCCCC---CeEEcCCCCCCCcceeEEEE--
Q 013929 200 ILTNSWSSGM-RMNAPRCLFGSASL-G-EIAILAGGSDLEGNILSSAEMYNSETQ---TWKVLPSMKNPRKMCSGVFM-- 271 (433)
Q Consensus 200 ~~t~~W~~~~-~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~r~~~~~~~~-- 271 (433)
+.+++.+.+. .+..+ ..++.- + +.|||.-. ....+++|++... ..+.+..++. ...+.+
T Consensus 172 ~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~------~~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~~d~ 238 (322)
T 2fp8_A 172 PSTKETTLLLKELHVP---GGAEVSADSSFVLVAEF------LSHQIVKYWLEGPKKGTAEVLVKIPN----PGNIKRNA 238 (322)
T ss_dssp TTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEG------GGTEEEEEESSSTTTTCEEEEEECSS----EEEEEECT
T ss_pred CCCCEEEEeccCCccC---cceEECCCCCEEEEEeC------CCCeEEEEECCCCcCCccceEEeCCC----CCCeEECC
Confidence 9888765432 11111 223333 3 36888732 2357889998752 3443332221 222233
Q ss_pred CCEEEEEccccCCC---CcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeE
Q 013929 272 DGKFYVIGGIGGSD---SKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEV 348 (433)
Q Consensus 272 ~g~lyv~GG~~~~~---~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i 348 (433)
+|+||+........ ......+.+||+....-..+. .+..... .....++..+++||+.+...+.|
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~~-----------~~~~~~~~~~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFAG-----------EHFEQIQEHDGLLYIGTLFHGSV 306 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTTT-----------SCCCEEEEETTEEEEECSSCSEE
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE-CCCCCcc-----------ccceEEEEeCCEEEEeecCCCce
Confidence 57888875331000 011345889998654444443 2211100 01124666789999988778899
Q ss_pred EEEeCCCC
Q 013929 349 RKYDKERR 356 (433)
Q Consensus 349 ~~yd~~~~ 356 (433)
.+|++..+
T Consensus 307 ~~~~~~~~ 314 (322)
T 2fp8_A 307 GILVYDKK 314 (322)
T ss_dssp EEEEC---
T ss_pred EEEecccc
Confidence 99987654
No 123
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.79 E-value=0.2 Score=45.81 Aligned_cols=230 Identities=13% Similarity=0.088 Sum_probs=107.3
Q ss_pred EEEEeec-cceEEEEecCCCcE--EeCCCCCCccccccCCceEEE-E-CCEEEEECCCCCCcccceeEEEEEcCCCceec
Q 013929 133 WVYFSCH-LLEWEAFDPIRRRW--MHLPRMTSNECFMCSDKESLA-V-GTELLVFGRELTAHHISHVIYRYSILTNSWSS 207 (433)
Q Consensus 133 ~l~~~~~-~~~~~~yd~~~~~W--~~l~~~p~~~~~~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 207 (433)
++|+... ...++.+|+.+.+- ..+.....+. ..++. . +..+| .+... .....+++||+.+++...
T Consensus 53 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~-~~~~~---~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 53 NVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM------ADVDITPDDQFAV-TVTGL---NHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC------CCEEECTTSSEEE-ECCCS---SSSCEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCeEEEEECCCCceeEEecccCCCCc------cceEECCCCCEEE-EecCC---CCcccEEEEECCCCCeEE
Confidence 3444433 45788899887663 2222111111 10122 2 34566 43221 011269999998887543
Q ss_pred CCCCCCCcceeeEEEe-CC-EEEEEccCCCCCCcCCc-eEEEeCCCCC-eEEc--CCCCCCCcceeEEE-ECCE-EEEEc
Q 013929 208 GMRMNAPRCLFGSASL-GE-IAILAGGSDLEGNILSS-AEMYNSETQT-WKVL--PSMKNPRKMCSGVF-MDGK-FYVIG 279 (433)
Q Consensus 208 ~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~-~~~yd~~t~~-W~~~--~~~p~~r~~~~~~~-~~g~-lyv~G 279 (433)
.- +.....+.++.. ++ +||+.+..+ .. +.+|+...+. -... ..++........+. -+|+ +|+.+
T Consensus 123 ~~--~~~~~~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 123 TI--PIPYDAVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp EE--ECCTTEEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred EE--ECCCCccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe
Confidence 21 112222333333 44 577775421 33 6666655432 1100 01111111222232 2454 77764
Q ss_pred cccCCCCcccceEEEEECCCCce-EecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCE-EEEEecCCCeEEEEeCCCC
Q 013929 280 GIGGSDSKVLTCGEEYDLETETW-TEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNE-LYAADYADMEVRKYDKERR 356 (433)
Q Consensus 280 G~~~~~~~~~~~v~~yd~~t~~W-~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~-ly~~gg~~~~i~~yd~~~~ 356 (433)
..+ ..+.+||+.+.+. ..+..++..... ..++. -+++ +|+.....+.|.+||++++
T Consensus 195 ~~~-------~~v~v~d~~~~~~~~~~~~~~~~~~~--------------~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 195 LIG-------NSIGILETQNPENITLLNAVGTNNLP--------------GTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp TTT-------TEEEEEECSSTTSCEEEEEEECSSCC--------------CCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred CCC-------CeEEEEECCCCcccceeeeccCCCCC--------------ceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 332 3588999988764 112112211111 12333 2454 7777655678999999999
Q ss_pred cEEEeccCCCc----ccCCCc-ccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 357 LWFTIGRLPER----ANSMNG-WGLAFRACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 357 ~W~~v~~lp~~----~~~~~~-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+.+.+..++.. ...... ...++..-+..||+.+... ..+.+|+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~------~~v~v~d~~ 303 (331)
T 3u4y_A 254 TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS------RELKVFTIS 303 (331)
T ss_dssp EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT------TEEEEEETT
T ss_pred ceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC------CcEEEEEec
Confidence 88666543322 110000 0123322344566665432 247778775
No 124
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.78 E-value=0.35 Score=46.21 Aligned_cols=146 Identities=12% Similarity=0.112 Sum_probs=77.9
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++.+++.|+. ...+.+||..+++....-..... .-.+++. -++.+++.|+.++ .+.+||..+..-
T Consensus 119 ~~~~l~s~s~------Dg~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~~~~- 184 (410)
T 1vyh_C 119 VFSVMVSASE------DATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADM------TIKLWDFQGFEC- 184 (410)
T ss_dssp SSSEEEEEES------SSCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTS------CCCEEETTSSCE-
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCCC------eEEEEeCCCCce-
Confidence 3456666654 23588999888764321111111 1112222 2567777777654 366788776542
Q ss_pred EcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 255 VLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 255 ~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
+..+......-..+.+ ++..++.|+.+ ..+..||+.++.-... +....... ..+
T Consensus 185 -~~~~~~h~~~V~~v~~~p~~~~l~s~s~D-------~~i~~wd~~~~~~~~~--~~~h~~~v--------------~~~ 240 (410)
T 1vyh_C 185 -IRTMHGHDHNVSSVSIMPNGDHIVSASRD-------KTIKMWEVQTGYCVKT--FTGHREWV--------------RMV 240 (410)
T ss_dssp -EECCCCCSSCEEEEEECSSSSEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSCE--------------EEE
T ss_pred -eEEEcCCCCCEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEE--EeCCCccE--------------EEE
Confidence 2222222222222222 56677777765 3578899987753221 11000110 112
Q ss_pred E--ECCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 333 V--VNNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 333 ~--~~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
. .++.+++.|+..+.|.+||..++.-.
T Consensus 241 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 241 RPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 2 25677888888899999999887654
No 125
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.3 Score=46.15 Aligned_cols=148 Identities=8% Similarity=0.007 Sum_probs=77.1
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC-----CcceeeEEEe-C-CEEEEEccCCCCCCcCCceEEEeCC
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA-----PRCLFGSASL-G-EIAILAGGSDLEGNILSSAEMYNSE 249 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-----~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~yd~~ 249 (433)
+.+++.|+. ...+.+||..+++-...-..+. .....+++.. + ..+++.|+.++. ...+.+||..
T Consensus 178 ~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~~ 248 (416)
T 2pm9_A 178 AHVFASAGS------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDLR 248 (416)
T ss_dssp TTEEEEESS------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEETT
T ss_pred CcEEEEEcC------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeCC
Confidence 456666654 2358999998876533222211 1112222332 2 356777665431 1367889988
Q ss_pred CCCeEEcCCCC-CCCcceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCC
Q 013929 250 TQTWKVLPSMK-NPRKMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPNMSPARGGAARGTEMPAS 324 (433)
Q Consensus 250 t~~W~~~~~~p-~~r~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~ 324 (433)
+..- .+..+. ........+.+ ++++++.|+.+ ..+.+||+.+.+-.. +........
T Consensus 249 ~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~v~----------- 309 (416)
T 2pm9_A 249 NANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-------NTVLLWNPESAEQLSQFPARGNWCF----------- 309 (416)
T ss_dssp STTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-------SEEEEECSSSCCEEEEEECSSSCCC-----------
T ss_pred CCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-------CCEEEeeCCCCccceeecCCCCceE-----------
Confidence 7531 111121 11112222222 67777877765 247889988764322 111111111
Q ss_pred cCCCCEEEEE-CC-EEEEEecCCCeEEEEeCCCCc
Q 013929 325 AEAPPLVAVV-NN-ELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 325 ~~~~~~~~~~-~~-~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.++.. ++ .+++.++..+.|.+||..+..
T Consensus 310 -----~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 310 -----KTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp -----CEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred -----EEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 23332 44 678888888899999987653
No 126
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.77 E-value=1.2 Score=40.99 Aligned_cols=156 Identities=10% Similarity=0.068 Sum_probs=87.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCC-------CCCc-ceeeEEEe-C-CEEEEEccCCCCCCcCCceEE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRM-------NAPR-CLFGSASL-G-EIAILAGGSDLEGNILSSAEM 245 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-------p~~r-~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~ 245 (433)
++.||+..++ ..+.+.+||+....-..+... +... ....+++- + +.|||... ....+.+
T Consensus 154 ~g~lyv~d~~-----~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~------~~~~I~~ 222 (329)
T 3fvz_A 154 TGAVFVSDGY-----CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR------ENGRIQC 222 (329)
T ss_dssp TCCEEEEECS-----SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET------TTTEEEE
T ss_pred CCeEEEEeCC-----CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC------CCCEEEE
Confidence 5789998752 234688999654433332211 1111 12344443 3 89999853 2357999
Q ss_pred EeCCCCCeEE-cCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEec-CCCCCCCCCCCCCCcCCC
Q 013929 246 YNSETQTWKV-LPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI-PNMSPARGGAARGTEMPA 323 (433)
Q Consensus 246 yd~~t~~W~~-~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~~~ 323 (433)
||+.+++... +............+...+.+|...|...-.......+.+||+.+++.... .... ....
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~--------- 292 (329)
T 3fvz_A 223 FKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR-KHFD--------- 292 (329)
T ss_dssp EETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS-SCCS---------
T ss_pred EECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC-CccC---------
Confidence 9999776643 32222222233444455777777664322223345688999888875543 2111 1111
Q ss_pred CcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCC
Q 013929 324 SAEAPPLVAV-VNNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 324 ~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~ 355 (433)
.+.++++ -+|.||+.....+.|.+|++..
T Consensus 293 ---~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 293 ---MPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ---SEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred ---CeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 0112333 2679999988788999998753
No 127
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.71 E-value=0.37 Score=43.52 Aligned_cols=191 Identities=13% Similarity=0.035 Sum_probs=100.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCc--eecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC-
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNS--WSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT- 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~- 252 (433)
.+++++.|.. .+.+.++|+++++ |+.-..-. .......+.-+++|++.+ -..+..||+ +++
T Consensus 4 ~~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~ 67 (276)
T 3no2_A 4 PQHLLVGGSG------WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--------SKGAKMITR-DGRE 67 (276)
T ss_dssp CCEEEEECTT------CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCE
T ss_pred CCcEEEeeCC------CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCE
Confidence 3566666643 3468899998885 66432210 112223333477888842 245899999 553
Q ss_pred -eEEcCCCCCCCcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCC-ceEec-C-CCCCCCCCCCCCCcCCCCcCC
Q 013929 253 -WKVLPSMKNPRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETE-TWTEI-P-NMSPARGGAARGTEMPASAEA 327 (433)
Q Consensus 253 -W~~~~~~p~~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~-~-~~p~~r~~~~~~~~~~~~~~~ 327 (433)
|+.-.+ .....+++. ..+|++++..... ...++.+|+.-. .|+.- . ..+..... .
T Consensus 68 ~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~------------~ 127 (276)
T 3no2_A 68 LWNIAAP--AGCEMQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERPHAQ------------F 127 (276)
T ss_dssp EEEEECC--TTCEEEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSGGGS------------C
T ss_pred EEEEcCC--CCccccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCccccc------------c
Confidence 765432 111222333 3467777764321 135677887443 24321 1 11100000 0
Q ss_pred CCEEEEECCEEEEEecCCCeEEEEeCCCC-cEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 328 PPLVAVVNNELYAADYADMEVRKYDKERR-LWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 328 ~~~~~~~~~~ly~~gg~~~~i~~yd~~~~-~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
.......+|.+++.....+.|.+||++.+ .|+.-. +... + .+....+|.+++.+... ..+..+++
T Consensus 128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~--~~~~-----~-~~~~~~~g~~~v~~~~~------~~v~~~d~ 193 (276)
T 3no2_A 128 RQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKL--SGTP-----F-SSAFLDNGDCLVACGDA------HCFVQLNL 193 (276)
T ss_dssp SCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC--SSCC-----C-EEEECTTSCEEEECBTT------SEEEEECT
T ss_pred cCceECCCCCEEEEecCCCEEEEECCCCCEEEEEEC--CCCc-----c-ceeEcCCCCEEEEeCCC------CeEEEEeC
Confidence 01234457777777777789999999843 365432 2111 1 23334577888877542 13566666
Q ss_pred CCCCCCceEe
Q 013929 407 SEGPPQWNLL 416 (433)
Q Consensus 407 ~~~~~~W~~v 416 (433)
+..+..|+.-
T Consensus 194 ~tG~~~w~~~ 203 (276)
T 3no2_A 194 ESNRIVRRVN 203 (276)
T ss_dssp TTCCEEEEEE
T ss_pred cCCcEEEEec
Confidence 6556677765
No 128
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.70 E-value=0.39 Score=45.87 Aligned_cols=232 Identities=11% Similarity=0.075 Sum_probs=104.8
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR 210 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 210 (433)
++........+..||..+.+-... +. .|...-..+.. ++.+++.|+.+ ..+.+||..+.+-.. .
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~~~--l~----~h~~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~~~~~~~--~ 187 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFERT--LK----GHTDSVQDISFDHSGKLLASCSAD------MTIKLWDFQGFECIR--T 187 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCCEE--EC----CCSSCEEEEEECTTSSEEEEEETT------SCCCEEETTSSCEEE--C
T ss_pred EEEEEeCCCeEEEEECCCCcEEEE--Ee----ccCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeE--E
Confidence 344444445677888776543211 00 11111111222 45666666542 346778887654321 1
Q ss_pred CCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCC
Q 013929 211 MNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDS 286 (433)
Q Consensus 211 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~ 286 (433)
+........++.+ ++..++.|+.+ ..+.+||..++.-... +.........+. -++.+++.|+.++
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~--- 256 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ--- 256 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS---
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC---
Confidence 2111111222222 45566666654 4588899887753211 111111111222 2567777777652
Q ss_pred cccceEEEEECCCCceEec-CCCCCCCCCCCCCCcCC--------CCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 287 KVLTCGEEYDLETETWTEI-PNMSPARGGAARGTEMP--------ASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 287 ~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.+.+||+.+...... .......... ...+ .............+.+++.|+..+.|.+||..++.
T Consensus 257 ----~v~vwd~~~~~~~~~~~~h~~~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 257 ----TVRVWVVATKECKAELREHRHVVECI---SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp ----CEEEEETTTCCEEEEECCCSSCEEEE---EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred ----eEEEEECCCCceeeEecCCCceEEEE---EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 467788877654321 1100000000 0000 00000000111236677788888999999998764
Q ss_pred EEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 358 WFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 358 W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
= +..+.... ..-.+++. .+++.++.||.++ .+.+|++..
T Consensus 330 ~--~~~~~~h~----~~v~~v~~~~~g~~l~s~s~D~------~i~vwd~~~ 369 (410)
T 1vyh_C 330 C--LMTLVGHD----NWVRGVLFHSGGKFILSCADDK------TLRVWDYKN 369 (410)
T ss_dssp E--EEEEECCS----SCEEEEEECSSSSCEEEEETTT------EEEEECCTT
T ss_pred e--EEEEECCC----CcEEEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence 2 22221111 11122332 3566666776532 477888753
No 129
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.70 E-value=0.38 Score=43.91 Aligned_cols=146 Identities=12% Similarity=0.120 Sum_probs=72.1
Q ss_pred EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceE
Q 013929 226 IAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWT 303 (433)
Q Consensus 226 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 303 (433)
.+++.|+.+ ..+.+||..+..-... +......-..+. -++++++.|+.++ .+.+||+.+..-.
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~Dg-------~i~iwd~~~~~~~ 250 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANCKLKTN--HIGHTGYLNTVTVSPDGSLCASGGKDG-------QAMLWDLNEGKHL 250 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTC-------EEEEEETTTTEEE
T ss_pred cEEEEEcCC------CEEEEEECCCCceeeE--ecCCCCcEEEEEECCCCCEEEEEeCCC-------eEEEEEeccCcee
Confidence 455566544 3478889887654322 111111112222 2577777777652 4678888775432
Q ss_pred ecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEEe-cc-C-CCcccCCCcccEEEEE
Q 013929 304 EIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFTI-GR-L-PERANSMNGWGLAFRA 380 (433)
Q Consensus 304 ~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v-~~-l-p~~~~~~~~~~~~~~~ 380 (433)
.. +...... ..++...+..++.++..+.|.+||.+++.-... .. . ......+...-.+++.
T Consensus 251 ~~--~~~~~~v--------------~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 314 (340)
T 4aow_A 251 YT--LDGGDII--------------NALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 314 (340)
T ss_dssp EE--EECSSCE--------------EEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE
T ss_pred ee--ecCCceE--------------EeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE
Confidence 21 1111111 123333444556666778899999987753322 11 1 0111111111122332
Q ss_pred -eCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 381 -CGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 381 -~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
.++++++.||.++ .+.+|+...
T Consensus 315 s~dg~~l~sgs~Dg------~v~iW~~~t 337 (340)
T 4aow_A 315 SADGQTLFAGYTDN------LVRVWQVTI 337 (340)
T ss_dssp CTTSSEEEEEETTS------CEEEEEEEC
T ss_pred CCCCCEEEEEeCCC------EEEEEeCCC
Confidence 3567777787643 277887753
No 130
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.70 E-value=0.38 Score=44.23 Aligned_cols=153 Identities=10% Similarity=0.053 Sum_probs=78.2
Q ss_pred EEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-C---CEEEEEccCCCCCCcCCceEEEeCCCCC-
Q 013929 178 ELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-G---EIAILAGGSDLEGNILSSAEMYNSETQT- 252 (433)
Q Consensus 178 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~yd~~t~~- 252 (433)
.+++.|+.. .....+.+||..+++............-.+++.. + +.+++.|+.+ ..+.+||..+..
T Consensus 32 ~l~~~~s~~---~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~ 102 (357)
T 3i2n_A 32 KFVTMGNFA---RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLEAPEM 102 (357)
T ss_dssp EEEEEEC-----CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTTSCSS
T ss_pred eEEEecCcc---CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCCCCCc
Confidence 555566431 0134688999988776433222111111222222 2 4666676654 347888888764
Q ss_pred -eEEcCCCCCCCcceeEE-------EECCEEEEEccccCCCCcccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCC
Q 013929 253 -WKVLPSMKNPRKMCSGV-------FMDGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMP 322 (433)
Q Consensus 253 -W~~~~~~p~~r~~~~~~-------~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~ 322 (433)
-..+...... -.... .-+++.++.|+.++ .+.+||+.+.. ...+..........
T Consensus 103 ~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~------- 166 (357)
T 3i2n_A 103 PVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDG-------TVKVWDPRQKDDPVANMEPVQGENKRD------- 166 (357)
T ss_dssp CSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTS-------CEEEECTTSCSSCSEEECCCTTSCCCC-------
T ss_pred cEEEEEecccc--eEEEeeccccccCCCccEEEEEeCCC-------eEEEEeCCCCCCcceeccccCCCCCCc-------
Confidence 1222111110 11111 13566777776652 47889988764 33332221111110
Q ss_pred CCcCCCCEEEE------ECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 323 ASAEAPPLVAV------VNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 323 ~~~~~~~~~~~------~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
...+. .++.+++.|+..+.|..||..+.+-...
T Consensus 167 ------v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (357)
T 3i2n_A 167 ------CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE 205 (357)
T ss_dssp ------EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ------eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee
Confidence 01122 4678888888889999999998875433
No 131
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.70 E-value=2.3 Score=43.82 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=72.2
Q ss_pred EEECCEEEEECCCCCCcccceeEEEEEcCCCc--eecCCCCCCC--------cceeeEEEeCCEEEEEccCCCCCCcCCc
Q 013929 173 LAVGTELLVFGRELTAHHISHVIYRYSILTNS--WSSGMRMNAP--------RCLFGSASLGEIAILAGGSDLEGNILSS 242 (433)
Q Consensus 173 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 242 (433)
++.++.||+... .+.++.+|..|++ |+.-...+.. ....+.++.+++||+... -..
T Consensus 67 ~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~ 132 (689)
T 1yiq_A 67 IVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGR 132 (689)
T ss_dssp EEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSE
T ss_pred EEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCE
Confidence 567999999864 2358999999885 8754332211 011234667899988631 246
Q ss_pred eEEEeCCCCC--eEEcCC-CCC--CCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCc--eEec
Q 013929 243 AEMYNSETQT--WKVLPS-MKN--PRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEI 305 (433)
Q Consensus 243 ~~~yd~~t~~--W~~~~~-~p~--~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~ 305 (433)
++.+|..|++ |+.-.. -+. .....+.++.++++|+-.+.. . ......+..||..|++ |+.-
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~-~-~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGA-E-FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCT-T-TCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCC-c-cCCCCEEEEEECCCCcEEEEec
Confidence 8999999875 876432 111 112234456799988743321 1 1123468999999876 8753
No 132
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.69 E-value=1.5 Score=46.02 Aligned_cols=185 Identities=8% Similarity=0.067 Sum_probs=102.2
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEE-EECCEEEEECCCCCCcccceeEEEEEcCCCceecCCC-CCCCccee
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESL-AVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR-MNAPRCLF 218 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~r~~~ 218 (433)
.-+..||+.+++...+.......... -..++ ..++.|++... +.+++||+.+++++.+.. ++......
T Consensus 107 ~Gl~~yd~~~~~f~~~~~~~~~~~~~--i~~i~~d~~g~lwi~t~--------~gl~~~~~~~~~~~~~~~~~~~~~~i~ 176 (795)
T 4a2l_A 107 DGLSRYDEEKDIFQNFFYEKNGKHLQ--VNGIEEISPEQLLISTP--------EGLIMFDIKESKFIDDSFSTAMHKTIA 176 (795)
T ss_dssp SCEEEEETTTTEEEEECCEETTEECC--CCEEEEEETTEEEEEET--------TEEEEEETTTTEEECSSSCHHHHTCCE
T ss_pred CchheeCCCCCeEEeccccccCCCce--EEEEEECCCCCEEEEEC--------CceEEEECCCCEEEeccCCCCCCcceE
Confidence 45788999988887765322110000 01122 23678887542 258999999988876543 11111011
Q ss_pred eEE-EeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEE-EECCEEEEEccccCCCCcccceEEEEE
Q 013929 219 GSA-SLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYD 296 (433)
Q Consensus 219 ~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd 296 (433)
++. ..++.|||.. . ...+++||+.+++++.+...+....-.+.. --+|.+++.. .. ..+..||
T Consensus 177 ~i~~d~~g~lwigt-~------~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-~~-------~Gl~~~~ 241 (795)
T 4a2l_A 177 STLYRQGDQIYIGT-S------TDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-EG-------AGLFLIN 241 (795)
T ss_dssp EEEEEETTEEEEEE-S------SSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-BS-------SCEEEEE
T ss_pred EEEECCCCCEEEEE-C------CCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-CC-------CCeEEEe
Confidence 222 2378888841 1 134889999999998764332211112222 2467777742 11 1368899
Q ss_pred CCCCceEecCCCC---CCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEecc
Q 013929 297 LETETWTEIPNMS---PARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 297 ~~t~~W~~~~~~p---~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~ 363 (433)
+.+++++.....+ ...... .-.+++.. +|.|++-. .. .+..||+.++.+..+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~-----------~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~ 299 (795)
T 4a2l_A 242 PKTKEIKNYLHSPSNPKSISSN-----------YIRSLAMDSQNRLWIGT-FN-DLNIYHEGTDSFASYSS 299 (795)
T ss_dssp TTTTEEEEECCCTTCTTSCSCS-----------BEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECC
T ss_pred CCCCeEEEeecCCCCccccCCC-----------eEEEEEEcCCCCEEEEe-CC-hhheEcCCCCeEEEEec
Confidence 9999888764321 111110 00022232 56766643 33 79999999999988754
No 133
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.68 E-value=1.3 Score=40.75 Aligned_cols=190 Identities=13% Similarity=0.042 Sum_probs=95.9
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCC--CeEEcCCC------CCCC
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQ--TWKVLPSM------KNPR 263 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~------p~~r 263 (433)
+.++++|+.+++.........-.....+++- ++.|||.... ...+.+||+... .-..+... ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 4689999988775432111111112333333 6789988532 356889998765 22223211 1111
Q ss_pred cc-eeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCC---CCCCCCCCcCCCCcCCCCEEEEE-C-
Q 013929 264 KM-CSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPA---RGGAARGTEMPASAEAPPLVAVV-N- 335 (433)
Q Consensus 264 ~~-~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~---r~~~~~~~~~~~~~~~~~~~~~~-~- 335 (433)
.. ..+++. ++.+|+..++. ...|.+||+....-..+...... .... ...+.++++. +
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~---------~~~p~gia~d~~~ 207 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYC------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQ---------FSVPHSLALVPHL 207 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSS------CCEEEEECTTSCEEEEECEECCSSSCCTTE---------ESCEEEEEEETTT
T ss_pred CCCcEEEEeCCCCeEEEEeCCC------CCeEEEEcCCCCEEEEeccCCCCCCCCCcc---------cCCCcEEEEECCC
Confidence 12 234443 68999996532 24688899654443333211100 0000 0011234443 4
Q ss_pred CEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCC-CCeeEEEEeecC
Q 013929 336 NELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASG-EGFIELNSWVPS 407 (433)
Q Consensus 336 ~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~~~~~ 407 (433)
+.||+.....+.|.+||+.+++....-..+..... -.+++...+.+|+..|..... .....+.+|++.
T Consensus 208 g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~ 276 (329)
T 3fvz_A 208 DQLCVADRENGRIQCFKTDTKEFVREIKHASFGRN----VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFS 276 (329)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC----EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEEeccccCCC----cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcC
Confidence 89999998888999999997766543222211110 022333447777776642211 122345566653
No 134
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.67 E-value=0.51 Score=43.47 Aligned_cols=156 Identities=10% Similarity=0.130 Sum_probs=78.4
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCC--CCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSET--QTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLET 299 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t 299 (433)
+++.++.|+.+ ..+.+||... ..++.+..+......-..+.+ ++.+++.|+.++ .+.+||..+
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-------~i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-------TVRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-------CEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-------eEEEEECCC
Confidence 56666777654 3477888743 234433322222222222222 567777777662 367788777
Q ss_pred CceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-C--CEEEEEecCCCeEEEEeCCCC------cEEEeccCCCcccC
Q 013929 300 ETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-N--NELYAADYADMEVRKYDKERR------LWFTIGRLPERANS 370 (433)
Q Consensus 300 ~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~--~~ly~~gg~~~~i~~yd~~~~------~W~~v~~lp~~~~~ 370 (433)
+.|..+..+....... .++... + +..++.|+..+.|.+||..+. .|..+..++....
T Consensus 185 ~~~~~~~~~~~h~~~v-------------~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~- 250 (330)
T 2hes_X 185 DDWECVAVLNGHEGTV-------------WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHK- 250 (330)
T ss_dssp TEEEEEEEECCCSSCE-------------EEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCS-
T ss_pred CCeeEEEEccCCCCcE-------------EEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccc-
Confidence 7776554332111110 012221 2 345666777888888887542 5666655543111
Q ss_pred CCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEe
Q 013929 371 MNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLL 416 (433)
Q Consensus 371 ~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v 416 (433)
..-.+++...+.+++.||.++ .+.+|+.. ..+|+.+
T Consensus 251 --~~v~~v~~s~~~~l~s~~~dg------~v~iw~~~--~~~~~~~ 286 (330)
T 2hes_X 251 --RQVYNVAWGFNGLIASVGADG------VLAVYEEV--DGEWKVF 286 (330)
T ss_dssp --SCEEEEEECTTSCEEEEETTS------CEEEEEEE--TTEEEEE
T ss_pred --cceEEEEEcCCCEEEEEeCCC------EEEEEEcC--CCceEEE
Confidence 111333333455666666532 25566653 3445443
No 135
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.64 E-value=1.5 Score=41.32 Aligned_cols=221 Identities=14% Similarity=0.051 Sum_probs=109.0
Q ss_pred EEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCcee-cCCC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWS-SGMR 210 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~~ 210 (433)
|........+..||..+..-...... |...-..+.. ++.+++.|+. ...+.+||..+++-. .+..
T Consensus 112 l~~~~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNLQREIDQA------HVSEITKLKFFPSGEALISSSQ------DMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp EEEEETTSCEEEECTTSCEEEEETTS------SSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCCCEEEEC
T ss_pred EEEEECCCCEEEEeCCCcceeeeccc------ccCccEEEEECCCCCEEEEEeC------CCeEEEEeCCCCcCceEEcC
Confidence 33333445677888776554333110 1111111222 4555566653 235889998776421 1111
Q ss_pred CCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE-cCCCCCCCcc-eeEEE-----------------
Q 013929 211 MNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKV-LPSMKNPRKM-CSGVF----------------- 270 (433)
Q Consensus 211 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~-~~~~~----------------- 270 (433)
....-.+++.. ++..++.|+.+ ..+.+||..+.+-.. +.....+... ...+.
T Consensus 180 --h~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 180 --HRATVTDIAIIDRGRNVLSASLD------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp --CSSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred --CCCcEEEEEEcCCCCEEEEEcCC------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 11111222222 55666666654 347888988765322 1111111111 11111
Q ss_pred -----ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCE-EEEEe
Q 013929 271 -----MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNE-LYAAD 342 (433)
Q Consensus 271 -----~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~-ly~~g 342 (433)
-++++++.|+.++ .+.+||+.+..-...- ....... ...+.. ++. +++.|
T Consensus 252 ~~~~s~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~--~~~~~~~-------------v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSG-------VITVHNVFSKEQTIQL--PSKFTCS-------------CNSLTVDGNNANYIYAG 309 (420)
T ss_dssp TTCSSCTTEEEEEEETTS-------CEEEEETTTCCEEEEE--CCTTSSC-------------EEEEEECSSCTTEEEEE
T ss_pred ceEEcCCCCEEEEEcCCC-------eEEEEECCCCceeEEc--ccccCCC-------------ceeEEEeCCCCCEEEEE
Confidence 2677777777652 3788999876532211 1111110 012222 344 77788
Q ss_pred cCCCeEEEEeCCCCc--EEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 343 YADMEVRKYDKERRL--WFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 343 g~~~~i~~yd~~~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+..+.|.+||..+.. -..+..-.... -..+...++++++.|+.+ ..+.+|++..
T Consensus 310 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~l~s~~~d------~~v~iw~~~~ 365 (420)
T 3vl1_A 310 YENGMLAQWDLRSPECPVGEFLINEGTP------INNVYFAAGALFVSSGFD------TSIKLDIISD 365 (420)
T ss_dssp ETTSEEEEEETTCTTSCSEEEEESTTSC------EEEEEEETTEEEEEETTT------EEEEEEEECC
T ss_pred eCCCeEEEEEcCCCcCchhhhhccCCCC------ceEEEeCCCCEEEEecCC------ccEEEEeccC
Confidence 888999999998763 12222111111 133445678888888753 3477887754
No 136
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.63 E-value=1.1 Score=41.77 Aligned_cols=224 Identities=11% Similarity=0.053 Sum_probs=103.5
Q ss_pred EEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE----CCEEEEECCCCCCcccceeEEEEEcCCCceecCC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV----GTELLVFGRELTAHHISHVIYRYSILTNSWSSGM 209 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 209 (433)
|........+..||..+.+-......+.... .+... ++.+++.|+. ...+.+||..+++-...
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~v~~~d~~~~~~~~~- 181 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVY------SHHMSPVSTKHCLVAVGTR------GPKVQLCDLKSGSCSHI- 181 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEE------EEEECSSCSSCCEEEEEES------SSSEEEEESSSSCCCEE-
T ss_pred EEEEeCCCeEEEeeCCCCccceeccCCCcee------eeEeecCCCCCcEEEEEcC------CCeEEEEeCCCcceeee-
Confidence 3333344567778877765443322222110 01111 2335555543 23588999887653211
Q ss_pred CCCCCccee-eEEEe-CC-EEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCC--------C----CCCCcceeEEEE-
Q 013929 210 RMNAPRCLF-GSASL-GE-IAILAGGSDLEGNILSSAEMYNSETQT--WKVLPS--------M----KNPRKMCSGVFM- 271 (433)
Q Consensus 210 ~~p~~r~~~-~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~--------~----p~~r~~~~~~~~- 271 (433)
+....... +++.. ++ .+++.|+.++ .+.+||..+.. ...+.. . ......-..+.+
T Consensus 182 -~~~~~~~v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 182 -LQGHRQEILAVSWSPRYDYILATASADS------RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp -ECCCCSCEEEEEECSSCTTEEEEEETTS------CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred -ecCCCCcEEEEEECCCCCcEEEEEcCCC------cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 11111111 22222 23 3677776543 47888887653 222210 0 111111122222
Q ss_pred -CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCC---CCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCe
Q 013929 272 -DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMS---PARGGAARGTEMPASAEAPPLVAVVNNELYAADYADME 347 (433)
Q Consensus 272 -~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p---~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~ 347 (433)
+++.++.|+.++ .+.+||+.+..-....... ...... ........+..+++++..+.
T Consensus 255 ~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 315 (408)
T 4a11_B 255 SDGLHLLTVGTDN-------RMRLWNSSNGENTLVNYGKVCNNSKKGL------------KFTVSCGCSSEFVFVPYGST 315 (408)
T ss_dssp TTSSEEEEEETTS-------CEEEEETTTCCBCCCCCCCCCCCCSSCC------------CCEECCSSSSCEEEEEETTE
T ss_pred CCCCEEEEecCCC-------eEEEEECCCCccceeccccccccccccc------------eeEEecCCCceEEEEecCCE
Confidence 566777777652 4788999876532221100 000010 01122222344455556788
Q ss_pred EEEEeCCCCcEEEeccCCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 348 VRKYDKERRLWFTIGRLPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 348 i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+.+||..+.+-... +...... -.+++ ..++++++.|+.++ .+.+|+++.
T Consensus 316 i~v~d~~~~~~~~~--~~~~~~~----v~~~~~s~~~~~l~s~~~dg------~i~iw~~~~ 365 (408)
T 4a11_B 316 IAVYTVYSGEQITM--LKGHYKT----VDCCVFQSNFQELYSGSRDC------NILAWVPSL 365 (408)
T ss_dssp EEEEETTTCCEEEE--ECCCSSC----EEEEEEETTTTEEEEEETTS------CEEEEEECC
T ss_pred EEEEECcCCcceee--eccCCCe----EEEEEEcCCCCEEEEECCCC------eEEEEeCCC
Confidence 99999887653322 2211110 12222 34567777777643 366777754
No 137
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.38 Score=44.28 Aligned_cols=64 Identities=17% Similarity=0.188 Sum_probs=34.7
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCC-Ce-EEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQ-TW-KVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLET 299 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W-~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t 299 (433)
+++.++.|+.+ ..+.+||..+. .- ..+.. .......+.+ ++..++.|+.+ ..+.+||+.+
T Consensus 186 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~ 249 (369)
T 3zwl_B 186 KGKYIIAGHKD------GKISKYDVSNNYEYVDSIDL---HEKSISDMQFSPDLTYFITSSRD-------TNSFLVDVST 249 (369)
T ss_dssp GGCEEEEEETT------SEEEEEETTTTTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeEEEEec---CCCceeEEEECCCCCEEEEecCC-------ceEEEEECCC
Confidence 45556666543 45889999873 22 11211 1111222222 56666776654 2578899987
Q ss_pred CceE
Q 013929 300 ETWT 303 (433)
Q Consensus 300 ~~W~ 303 (433)
.+-.
T Consensus 250 ~~~~ 253 (369)
T 3zwl_B 250 LQVL 253 (369)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 6543
No 138
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.57 E-value=1.4 Score=40.52 Aligned_cols=156 Identities=12% Similarity=0.134 Sum_probs=79.2
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCce
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETW 302 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W 302 (433)
++.+++.|+.+ ..+.+||..+..-.............+++. -++.+++.|+.++ .+.+||+.+..-
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-------~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-------ILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-------CEEEEESSCTTS
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCCC
Confidence 45666767654 348889998876543322121111222222 3677888887663 478899987753
Q ss_pred E--ecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcE-EEeccCCCcccCCCcccEEE
Q 013929 303 T--EIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLW-FTIGRLPERANSMNGWGLAF 378 (433)
Q Consensus 303 ~--~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W-~~v~~lp~~~~~~~~~~~~~ 378 (433)
. .+.. ..... -.++... ++..++.++ .+.|.+||..+..= ..+..+........ ..++
T Consensus 205 ~~~~~~~---~h~~~------------v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~ 266 (343)
T 3lrv_A 205 ASSRFPV---DEEAK------------IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTG--TVTY 266 (343)
T ss_dssp CCEECCC---CTTSC------------EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----C--CEEE
T ss_pred CccEEec---cCCCC------------EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccccccccc--ceEE
Confidence 2 2211 01110 0012222 566666666 44899999987541 11111111111000 0123
Q ss_pred EE-eCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceE
Q 013929 379 RA-CGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNL 415 (433)
Q Consensus 379 ~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~ 415 (433)
+. .+++.++.|+..+ ..+.+|+++.....|+.
T Consensus 267 ~~~~~g~~l~~~s~~d-----~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNES-----NSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp EECTTSSEEEEEETTT-----TEEEEEEECTTTCSEEE
T ss_pred EECCCCCEEEEecCCC-----CcEEEEEEcccccceEe
Confidence 22 3566666643311 24788988877888987
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.56 E-value=0.36 Score=44.05 Aligned_cols=179 Identities=6% Similarity=0.001 Sum_probs=89.5
Q ss_pred ccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECC-EEEEECCCCCCcccceeEEEEEcCCCce-e-cCCCCCCC
Q 013929 139 HLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGT-ELLVFGRELTAHHISHVIYRYSILTNSW-S-SGMRMNAP 214 (433)
Q Consensus 139 ~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~-~~~~~p~~ 214 (433)
....+..||+.+.+....-..+... ..++. .++ .+|+.+.. ...+++||+.+++. . .+..-..+
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGYDF------VDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCCCE------EEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEEECSSC
T ss_pred CCCeEEEEeCcccceeeeEEccCCc------ceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecccCCCC
Confidence 3457889999988875543332211 11122 234 57777642 23789999998874 2 22211112
Q ss_pred cceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCE-EEEEccccCCCCcccc
Q 013929 215 RCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGK-FYVIGGIGGSDSKVLT 290 (433)
Q Consensus 215 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~-lyv~GG~~~~~~~~~~ 290 (433)
+ ++++.. +.+|| .+...+ ....+.+||+.+++-... ++.....+.++.. +|+ +|+.+... .
T Consensus 86 ~--~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~-------~ 150 (331)
T 3u4y_A 86 M--ADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNGLILIDRSS-------A 150 (331)
T ss_dssp C--CCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSCEEEEEETT-------T
T ss_pred c--cceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEE--EECCCCccceEECCCCCEEEEEecCC-------C
Confidence 1 212222 34566 322111 123799999998765432 2222222333332 454 77765432 2
Q ss_pred e-EEEEECCCCc-eEec--CCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CC-EEEEEecCCCeEEEEeCCCCcE
Q 013929 291 C-GEEYDLETET-WTEI--PNMSPARGGAARGTEMPASAEAPPLVAVV-NN-ELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 291 ~-v~~yd~~t~~-W~~~--~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~-~ly~~gg~~~~i~~yd~~~~~W 358 (433)
. +.+|++..+. .... ..++..... ..++.. ++ .+|+.+...+.+.+||+.+++.
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~--------------~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFISGGTRP--------------FNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEECSSSSE--------------EEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ceEEEEEECCCCcEeecCCccccCCCCc--------------cceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 3 5666655321 1111 001111000 122222 44 5888877778999999988775
No 140
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.71 Score=41.36 Aligned_cols=24 Identities=13% Similarity=0.044 Sum_probs=18.9
Q ss_pred EECCEEEEEecCCCeEEEEeCCCCc
Q 013929 333 VVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 333 ~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.-++. ++.|+..+.+..||..+++
T Consensus 193 ~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 193 VDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp EETTE-EEEEETTSEEEEEETTTCC
T ss_pred cCCCe-EEEccCCCeEEEEECCchh
Confidence 34667 7777788999999998765
No 141
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.51 E-value=0.48 Score=44.43 Aligned_cols=146 Identities=12% Similarity=0.009 Sum_probs=73.2
Q ss_pred EEEEECCCCCCcccceeEEEEEcCCCc------eecCCCCCCC---cceeeEEEe-----CCEE-EEEccCCCCCCcCCc
Q 013929 178 ELLVFGRELTAHHISHVIYRYSILTNS------WSSGMRMNAP---RCLFGSASL-----GEIA-ILAGGSDLEGNILSS 242 (433)
Q Consensus 178 ~iyv~GG~~~~~~~~~~~~~yd~~t~~------W~~~~~~p~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~ 242 (433)
.+++.|+. ...+.+||..+++ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..
T Consensus 82 ~~l~s~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~ 149 (397)
T 1sq9_A 82 CLVATTSF------SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------GT 149 (397)
T ss_dssp EEEEEEET------TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------SC
T ss_pred cEEEEEcC------CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------Cc
Confidence 66677654 2358888888776 6655443211 122233333 4555 6676654 34
Q ss_pred eEEEeCCC------CC---eE---EcCC-----CCCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCceEe
Q 013929 243 AEMYNSET------QT---WK---VLPS-----MKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE 304 (433)
Q Consensus 243 ~~~yd~~t------~~---W~---~~~~-----~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 304 (433)
+.+||..+ .. |. .+.. ......-.+++.. ++ +++.|+.+ ..+.+||+.+.+-..
T Consensus 150 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-------g~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 150 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-------GTVQISELSTLRPLY 221 (397)
T ss_dssp EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-------SEEEEEETTTTEEEE
T ss_pred EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-------CcEEEEECCCCceeE
Confidence 67777765 21 11 1100 0011111223332 46 66666654 357889998765332
Q ss_pred cCCC-CCC---CCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCC---CeEEEEeCCCCc
Q 013929 305 IPNM-SPA---RGGAARGTEMPASAEAPPLVAVV--NNELYAADYAD---MEVRKYDKERRL 357 (433)
Q Consensus 305 ~~~~-p~~---r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~---~~i~~yd~~~~~ 357 (433)
.-.. ... .... ..+.+ ++.+++.++.. +.|.+||..+.+
T Consensus 222 ~~~~~~~h~~~~~~i--------------~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 222 NFESQHSMINNSNSI--------------RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp EEECCC---CCCCCE--------------EEEEECSSTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred EEeccccccccCCcc--------------ceEEECCCCCEEEEEecCCCCceEEEEECCCCc
Confidence 2111 000 1110 12222 56777777766 899999998765
No 142
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.48 E-value=0.44 Score=45.71 Aligned_cols=184 Identities=9% Similarity=-0.068 Sum_probs=98.2
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CC-EEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GT-ELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL 217 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~ 217 (433)
..++.+|..+.+...+...+... ..+.. ++ .|++.+... ....++++|..+++.+.+...+.. .
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~-------~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~l~~~~~~--~ 269 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHN-------GAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQVTDGRSN--N 269 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCE-------EEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEECCCCSSC--E
T ss_pred cEEEEEECCCCcEEEeecCCCcc-------cCEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEeCcCCCCc--c
Confidence 37888898887776654333211 11222 44 455444321 234699999999887766443211 1
Q ss_pred eeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEE
Q 013929 218 FGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEY 295 (433)
Q Consensus 218 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~y 295 (433)
...+. -+++.+++++..+ ....++++|..++.-+.+.... ......+. -+|+..++++... ....++++
T Consensus 270 ~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~----g~~~i~~~ 340 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNG----GQQHIAKQ 340 (415)
T ss_dssp EEEEECTTSSEEEEEECTT---SSCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECS----SCEEEEEE
T ss_pred cceEECCCCCEEEEEECCC---CCcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcC----CceEEEEE
Confidence 12222 2454444443221 1357899999987655543211 11112222 3566555554331 13468999
Q ss_pred ECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCC---eEEEEeCCCCcEEEecc
Q 013929 296 DLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADM---EVRKYDKERRLWFTIGR 363 (433)
Q Consensus 296 d~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~---~i~~yd~~~~~W~~v~~ 363 (433)
|+.+++...+.... ... ..+ .-+++.+++++..+ .++.+|..++..+.+..
T Consensus 341 d~~~~~~~~l~~~~---~~~--------------~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 341 DLATGGVQVLSSTF---LDE--------------TPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp ETTTCCEEECCCSS---SCE--------------EEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred ECCCCCEEEecCCC---CcC--------------CeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 99999887664321 110 222 22566555544333 79999998887766643
No 143
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.42 E-value=0.19 Score=45.62 Aligned_cols=189 Identities=8% Similarity=0.002 Sum_probs=91.9
Q ss_pred EEEeeccceEEEEecCCCcEEeC-CCCCCccccccCCceEEE-ECCEEEEECCCC---------CCcccceeEEEEEcCC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHL-PRMTSNECFMCSDKESLA-VGTELLVFGREL---------TAHHISHVIYRYSILT 202 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l-~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~---------~~~~~~~~~~~yd~~t 202 (433)
+|+......+..||+. .+...+ .......... ....++. .++.+|+..... ........+++||+.
T Consensus 85 l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQ-GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEEEETTTEEEEEETT-SCEEECCSBCTTSCBCB-CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEEEECCCCEEEEeCC-CCEEEEEeccCCCcccc-CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 4444444568889998 777665 3222111100 1112222 256788765321 001123568999987
Q ss_pred CceecCC-CCCCCcceeeEEEe-----CC-EEEEEccCCCCCCcCCceEEEeCC-CCCeEE---cCCCCCCC-cce-eEE
Q 013929 203 NSWSSGM-RMNAPRCLFGSASL-----GE-IAILAGGSDLEGNILSSAEMYNSE-TQTWKV---LPSMKNPR-KMC-SGV 269 (433)
Q Consensus 203 ~~W~~~~-~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~---~~~~p~~r-~~~-~~~ 269 (433)
++...+. .+.. ....+.. ++ .||+.... ...+++||+. +++... ...++... ... .++
T Consensus 162 g~~~~~~~~~~~---~~~i~~~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 162 GQMIQVDTAFQF---PNGIAVRHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp SCEEEEEEEESS---EEEEEEEECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred CCEEEeccCCCC---cceEEEecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 6554331 1111 1223333 33 57776421 2568888876 343321 11222211 111 222
Q ss_pred E-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCE-EEEEecCCC
Q 013929 270 F-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNE-LYAADYADM 346 (433)
Q Consensus 270 ~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~-ly~~gg~~~ 346 (433)
. -+|++|+..... ..+.+||+.+++....-..+. ... .+++. -+++ ||+.....+
T Consensus 233 ~d~~G~l~v~~~~~-------~~i~~~d~~~g~~~~~~~~~~--~~~-------------~~i~~~~dg~~l~v~~~~~~ 290 (314)
T 1pjx_A 233 FDEDNNLLVANWGS-------SHIEVFGPDGGQPKMRIRCPF--EKP-------------SNLHFKPQTKTIFVTEHENN 290 (314)
T ss_dssp EBTTCCEEEEEETT-------TEEEEECTTCBSCSEEEECSS--SCE-------------EEEEECTTSSEEEEEETTTT
T ss_pred ECCCCCEEEEEcCC-------CEEEEEcCCCCcEeEEEeCCC--CCc-------------eeEEECCCCCEEEEEeCCCC
Confidence 2 257888874322 357889998554321111221 110 12332 2454 888876667
Q ss_pred eEEEEeCCCC
Q 013929 347 EVRKYDKERR 356 (433)
Q Consensus 347 ~i~~yd~~~~ 356 (433)
.|++|++...
T Consensus 291 ~l~~~~~~~~ 300 (314)
T 1pjx_A 291 AVWKFEWQRN 300 (314)
T ss_dssp EEEEEECSSC
T ss_pred eEEEEeCCCC
Confidence 9999998764
No 144
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.36 E-value=1.3 Score=41.67 Aligned_cols=192 Identities=10% Similarity=0.055 Sum_probs=94.0
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCc------ee-cCCCCC-CCcceeeEEEe-C-CEEEEEccCCCCCCcCCceEEE
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNS------WS-SGMRMN-APRCLFGSASL-G-EIAILAGGSDLEGNILSSAEMY 246 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~------W~-~~~~~p-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~y 246 (433)
+.+++.|+. ...+.+||..+++ -. .+.... ......+++.. + +.+++.|+.+ ..+.+|
T Consensus 126 ~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGN------NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS------NFASIW 193 (416)
T ss_dssp TTBEEEECS------SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEEEE
T ss_pred CCEEEEEcC------CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEEEE
Confidence 556666654 2358889988765 11 111111 11111222222 2 5677777654 348899
Q ss_pred eCCCCCeEEcCCCCCC----Ccce-eEEEE-CC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCC
Q 013929 247 NSETQTWKVLPSMKNP----RKMC-SGVFM-DG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGT 319 (433)
Q Consensus 247 d~~t~~W~~~~~~p~~----r~~~-~~~~~-~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~ 319 (433)
|..+..-...-..+.. .... .++.. ++ .+++.|+.++. ...+.+||+.+..- .+..+.......
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~~~i~~~d~~~~~~-~~~~~~~~~~~~---- 264 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN----DPSILIWDLRNANT-PLQTLNQGHQKG---- 264 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS----SCCCCEEETTSTTS-CSBCCCSCCSSC----
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC----CceEEEEeCCCCCC-CcEEeecCccCc----
Confidence 9988764332222211 1112 22222 23 46677665421 12467899887531 111111001110
Q ss_pred cCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCC-EEEEEcCCCCCC
Q 013929 320 EMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGD-RLIVIGGPKASG 395 (433)
Q Consensus 320 ~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~-~l~v~GG~~~~~ 395 (433)
-..++.. ++.+++.++..+.|.+||..+++-.. .+....... .+++. .++ ++++.|+.++
T Consensus 265 --------v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~--~~~~~~~~v----~~~~~s~~~~~~l~s~~~d~-- 328 (416)
T 2pm9_A 265 --------ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS--QFPARGNWC----FKTKFAPEAPDLFACASFDN-- 328 (416)
T ss_dssp --------EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE--EEECSSSCC----CCEEECTTCTTEEEECCSSS--
T ss_pred --------eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce--eecCCCCce----EEEEECCCCCCEEEEEecCC--
Confidence 0122222 67888888888999999998875322 222111110 12222 234 6888887642
Q ss_pred CCeeEEEEeecCCC
Q 013929 396 EGFIELNSWVPSEG 409 (433)
Q Consensus 396 ~~~~~~~~~~~~~~ 409 (433)
.+.+|++...
T Consensus 329 ----~i~iw~~~~~ 338 (416)
T 2pm9_A 329 ----KIEVQTLQNL 338 (416)
T ss_dssp ----EEEEEESCCC
T ss_pred ----cEEEEEccCC
Confidence 3667777543
No 145
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.35 E-value=2.2 Score=43.09 Aligned_cols=211 Identities=10% Similarity=0.049 Sum_probs=109.3
Q ss_pred EEEEeec-cceEEEEec-CCC--cEEeCCCCCCcccc-cc---CCceEEE--ECCE----EEEECCCCCCcccceeEEEE
Q 013929 133 WVYFSCH-LLEWEAFDP-IRR--RWMHLPRMTSNECF-MC---SDKESLA--VGTE----LLVFGRELTAHHISHVIYRY 198 (433)
Q Consensus 133 ~l~~~~~-~~~~~~yd~-~~~--~W~~l~~~p~~~~~-~~---~~~~~~~--~~~~----iyv~GG~~~~~~~~~~~~~y 198 (433)
.+|+... ...++++|. .+. .|+.-+..+..... .+ .....++ .++. ||+... ...++.+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~Al 136 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAAL 136 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEE
Confidence 3455544 456888998 664 58765544321100 00 1223444 5666 887642 2358999
Q ss_pred EcCCCc--eec-CCCCCCC-cceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCC------C----
Q 013929 199 SILTNS--WSS-GMRMNAP-RCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKN------P---- 262 (433)
Q Consensus 199 d~~t~~--W~~-~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~------~---- 262 (433)
|..|++ |+. +...... ....+-++.+++||+-.+..+. .....++.||..+++ |+.-...+. +
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~ 215 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL-GVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNI 215 (599)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG-TCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred ECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc-CCCCeEEEEECCCCcEEEEEcCCCCcccccccccccc
Confidence 999885 864 2221100 1122334568888875331111 123578999999876 875432111 0
Q ss_pred ------------------Cc-------ceeEEE--ECCEEEEEccccC--------CCCcccceEEEEECCCCc--eEec
Q 013929 263 ------------------RK-------MCSGVF--MDGKFYVIGGIGG--------SDSKVLTCGEEYDLETET--WTEI 305 (433)
Q Consensus 263 ------------------r~-------~~~~~~--~~g~lyv~GG~~~--------~~~~~~~~v~~yd~~t~~--W~~~ 305 (433)
.. ....++ -++.+|+-.|... ....+...++.+|++|++ |+.-
T Consensus 216 ~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q 295 (599)
T 1w6s_A 216 KNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQ 295 (599)
T ss_dssp TCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEE
T ss_pred ccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEee
Confidence 00 001122 3677887655320 012234679999999875 7643
Q ss_pred CCCCCCCCCCCCCCcCCCCcCCCCEEEE---ECC---EEEEEecCCCeEEEEeCCCCc--EEE
Q 013929 306 PNMSPARGGAARGTEMPASAEAPPLVAV---VNN---ELYAADYADMEVRKYDKERRL--WFT 360 (433)
Q Consensus 306 ~~~p~~r~~~~~~~~~~~~~~~~~~~~~---~~~---~ly~~gg~~~~i~~yd~~~~~--W~~ 360 (433)
........... ...+.++. .+| .+++.+...+.++++|.++++ |..
T Consensus 296 ~~~~d~wd~d~---------~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 296 KTPHDEWDYAG---------VNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SSTTCSSCCCC---------CCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCCccccccC---------CCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 22111100000 00012333 245 566666677889999988875 654
No 146
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.35 E-value=2 Score=40.76 Aligned_cols=181 Identities=10% Similarity=0.019 Sum_probs=100.5
Q ss_pred EEEEe-eccceEEEEecCCCcEEeCCC--CCCccccccCCceEEE--ECCEEEEECCCCCCcccceeEEEEEcCCCceec
Q 013929 133 WVYFS-CHLLEWEAFDPIRRRWMHLPR--MTSNECFMCSDKESLA--VGTELLVFGRELTAHHISHVIYRYSILTNSWSS 207 (433)
Q Consensus 133 ~l~~~-~~~~~~~~yd~~~~~W~~l~~--~p~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 207 (433)
.||+. .....++++++.......+.. +..| ..+++ .++.||+.-.. .+.++++++....-+.
T Consensus 129 ~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-------~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 129 LVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-------GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKV 195 (386)
T ss_dssp EEEEEETTTTEEEEEETTSCCEEEEECSSCSCC-------CCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEE
T ss_pred eEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCc-------cEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEE
Confidence 44543 234578888887766544422 2111 12333 36889987532 2357888876543322
Q ss_pred CC--CCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccc
Q 013929 208 GM--RMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGI 281 (433)
Q Consensus 208 ~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~ 281 (433)
+. .+..| ..+++. ++.||+.--. ....++++++....-+.+.... .....++++ .+++||+.-.
T Consensus 196 l~~~~l~~P---~giavdp~~g~ly~td~~-----~~~~I~r~~~dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~- 265 (386)
T 3v65_B 196 LLWQSLEKP---RAIALHPMEGTIYWTDWG-----NTPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDA- 265 (386)
T ss_dssp EECSSCSCE---EEEEEETTTTEEEEEECS-----SSCEEEEEETTSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEET-
T ss_pred eecCCCCCC---cEEEEEcCCCeEEEeccC-----CCCEEEEEeCCCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEEC-
Confidence 21 22222 233343 6899987321 1367999998765433332111 111234444 3789999832
Q ss_pred cCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 282 GGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 282 ~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
....|+++|+....-+.+.... . ..+.++++.++.||+.....+.|.++|..+++
T Consensus 266 ------~~~~I~~~d~dG~~~~~~~~~~---~------------~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 266 ------KHHVIERANLDGSHRKAVISQG---L------------PHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp ------TTTEEEEECTTSCSCEEEECSS---C------------SSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ------CCCEEEEEeCCCCeeEEEEECC---C------------CCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 2357899998653322221111 0 12236777899999998878899999965553
No 147
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.28 E-value=2 Score=44.74 Aligned_cols=181 Identities=10% Similarity=-0.003 Sum_probs=93.9
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCC-ceEEE-ECCEEEEECCCCCCcccceeEEEEEcCC------Ccee------
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSD-KESLA-VGTELLVFGRELTAHHISHVIYRYSILT------NSWS------ 206 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t------~~W~------ 206 (433)
.-+..||+.++++................ ..+.. -++.|++-. . ..-+++||+.+ ..+.
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~------~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-C------LGGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-S------SSCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-C------CCceEEEccccccccCCcceecccccc
Confidence 46788999998887653211100000000 11111 146777742 1 11267888764 1221
Q ss_pred cCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCC-CcceeEEEE--CCEEEEEcccc
Q 013929 207 SGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNP-RKMCSGVFM--DGKFYVIGGIG 282 (433)
Q Consensus 207 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~~--~g~lyv~GG~~ 282 (433)
....++.... .++.. -++.|++++|.. ..+.+||+.+++++.+..-... .....+... +|.|++. ...
T Consensus 465 ~~~~l~~~~i-~~i~~d~~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~ 536 (758)
T 3ott_A 465 VHNGLSGMFI-NQIIPDNEGNVWVLLYNN------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG 536 (758)
T ss_dssp GGGTCSCSCE-EEEEECTTSCEEEEETTC------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT
T ss_pred ccccccccee-eeEEEcCCCCEEEEccCC------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC
Confidence 1112222111 12222 257899866543 3488999999998876421111 111222233 4677764 222
Q ss_pred CCCCcccceEEEEECCCCceEecC--CCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 283 GSDSKVLTCGEEYDLETETWTEIP--NMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 283 ~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
-+.+||+.+++++... .++.... .+++..+|.|++-. .+.+.+||+++.+.+.
T Consensus 537 --------Gl~~~~~~~~~~~~~~~~gl~~~~i---------------~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~ 591 (758)
T 3ott_A 537 --------GVMRINPKDESQQSISFGSFSNNEI---------------LSMTCVKNSIWVST--TNGLWIIDRKTMDARQ 591 (758)
T ss_dssp --------EEEEECC--CCCCBCCCCC---CCE---------------EEEEEETTEEEEEE--SSCEEEEETTTCCEEE
T ss_pred --------ceEEEecCCCceEEecccCCCccce---------------EEEEECCCCEEEEC--CCCeEEEcCCCceeEE
Confidence 3788999998877653 2222111 13455688888764 4679999999988766
Q ss_pred e
Q 013929 361 I 361 (433)
Q Consensus 361 v 361 (433)
.
T Consensus 592 ~ 592 (758)
T 3ott_A 592 Q 592 (758)
T ss_dssp C
T ss_pred e
Confidence 5
No 148
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.26 E-value=0.78 Score=46.14 Aligned_cols=240 Identities=13% Similarity=-0.015 Sum_probs=115.2
Q ss_pred cEEEEee-ccceEEEEecCCCcEEe-CCCCCCccccccCCceEEE-E-CCEEEEECCCCCCcccceeEEEEEcCCCceec
Q 013929 132 HWVYFSC-HLLEWEAFDPIRRRWMH-LPRMTSNECFMCSDKESLA-V-GTELLVFGRELTAHHISHVIYRYSILTNSWSS 207 (433)
Q Consensus 132 ~~l~~~~-~~~~~~~yd~~~~~W~~-l~~~p~~~~~~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 207 (433)
..+|+.. ..+.+.++|+.+.+-.. ++.-..+ +.++. - +..+|+.+. .+.+.+||+.+.+-+.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p-------~~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~~~ 232 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV-------HISRLSASGRYLFVIGR-------DGKVNMIDLWMKEPTT 232 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCE-------EEEEECTTSCEEEEEET-------TSEEEEEETTSSSCCE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCc-------cceEECCCCCEEEEEcC-------CCeEEEEECCCCCCcE
Confidence 3555554 35789999999876542 3211111 11222 2 457787642 2469999996222233
Q ss_pred CCCCCCCcceeeEEEe-----CC-EEEEEccCCCCCCcCCceEEEeCCCCCeEE-cC--CC--------CCCCcceeEEE
Q 013929 208 GMRMNAPRCLFGSASL-----GE-IAILAGGSDLEGNILSSAEMYNSETQTWKV-LP--SM--------KNPRKMCSGVF 270 (433)
Q Consensus 208 ~~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~--~~--------p~~r~~~~~~~ 270 (433)
+..++.......++.. ++ ++||... ....+.++|..+.+=.. ++ .+ |.+|.....+.
T Consensus 233 v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 233 VAEIKIGSEARSIETSKMEGWEDKYAIAGAY------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEEEEEE------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred eEEEecCCCCceeEEccccCCCCCEEEEEEc------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc
Confidence 3333332222233333 34 7777732 23567888977754322 11 11 12222221112
Q ss_pred ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECC-EEEEEecCCCeEE
Q 013929 271 MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNN-ELYAADYADMEVR 349 (433)
Q Consensus 271 ~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~-~ly~~gg~~~~i~ 349 (433)
.++..+++-- .....++..|..+.....+..++..+.-| .....-++ .+|+.....+.|.
T Consensus 307 ~~~~~~vv~~------~~~g~v~~vd~~~~~~~~v~~i~~~~~~~-------------d~~~~pdgr~~~va~~~sn~V~ 367 (567)
T 1qks_A 307 HYRPEFIVNV------KETGKILLVDYTDLNNLKTTEISAERFLH-------------DGGLDGSHRYFITAANARNKLV 367 (567)
T ss_dssp SSSSEEEEEE------TTTTEEEEEETTCSSEEEEEEEECCSSEE-------------EEEECTTSCEEEEEEGGGTEEE
T ss_pred CCCCEEEEEe------cCCCeEEEEecCCCccceeeeeecccccc-------------CceECCCCCEEEEEeCCCCeEE
Confidence 2333333311 12345677887766544443333333322 01222244 4555555678999
Q ss_pred EEeCCCCcEEEe----ccCCCcccCCCcccEEEEEe-CCEEEEEcCCCCCCCCeeEEEEeecCCCC---CCceEecccC
Q 013929 350 KYDKERRLWFTI----GRLPERANSMNGWGLAFRAC-GDRLIVIGGPKASGEGFIELNSWVPSEGP---PQWNLLARKQ 420 (433)
Q Consensus 350 ~yd~~~~~W~~v----~~lp~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~~~---~~W~~v~~~p 420 (433)
++|.++++=... ...|.+. .+..+..- ++.+|+.+-... ..+-+++.+... ..|+.+..++
T Consensus 368 ViD~~t~kl~~~i~vgg~~Phpg-----~g~~~~~p~~g~v~~t~~~g~-----~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 368 VIDTKEGKLVAIEDTGGQTPHPG-----RGANFVHPTFGPVWATSHMGD-----DSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEETTTTEEEEEEECSSSSBCCT-----TCEEEEETTTEEEEEEEBSSS-----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred EEECCCCcEEEEEeccCcCCCCc-----cceeeECCCCCcEEEeCCCCC-----CeEEEecCCCCCCccccCEEEEEEe
Confidence 999999863322 2233322 12333333 367777663211 235556655422 2488876654
No 149
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.12 Score=47.75 Aligned_cols=192 Identities=10% Similarity=0.089 Sum_probs=93.2
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCC--CceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILT--NSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++..++.|+. ...+.+||... ..++.+..+.........+.+ ++.+++.|+.++ .+.++|..+.
T Consensus 118 ~g~~las~s~------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~~~~ 185 (330)
T 2hes_X 118 DGYYLATCSR------DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKDYDD 185 (330)
T ss_dssp TSCEEEEEET------TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEEETT
T ss_pred CCCEEEEEeC------CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC------eEEEEECCCC
Confidence 4555666654 23478888743 234332222211111222222 556777777553 4777887777
Q ss_pred CeEEcCCCCCCCcceeEEEE--C--CEEEEEccccCCCCcccceEEEEECCCC------ceEecCCCCCCCCCCCCCCcC
Q 013929 252 TWKVLPSMKNPRKMCSGVFM--D--GKFYVIGGIGGSDSKVLTCGEEYDLETE------TWTEIPNMSPARGGAARGTEM 321 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~~~~~~--~--g~lyv~GG~~~~~~~~~~~v~~yd~~t~------~W~~~~~~p~~r~~~~~~~~~ 321 (433)
.|+.+..+......-..+.+ + +...+.|+.++ .+.+||+.+. .|.....++......
T Consensus 186 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~------ 252 (330)
T 2hes_X 186 DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ------ 252 (330)
T ss_dssp EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-------CEEEEEEEEECTTSCEEEEEEEECCSCCSSC------
T ss_pred CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-------eEEEEEecCCCccccceeEEeeecccccccc------
Confidence 77655443322222122222 2 34555666552 3455655332 354433332211110
Q ss_pred CCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCccc-EEEEEe---CCEEEEEcCCCCCCCC
Q 013929 322 PASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWG-LAFRAC---GDRLIVIGGPKASGEG 397 (433)
Q Consensus 322 ~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~-~~~~~~---~~~l~v~GG~~~~~~~ 397 (433)
-..++...+.+++.++..+.|.+||..++.|+.+........ .+. .+++.. ++++++.||.+.
T Consensus 253 ------v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~---~~~v~~v~~~~~~~~~~las~s~Dg---- 319 (330)
T 2hes_X 253 ------VYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHG---VYEINVVKWLELNGKTILATGGDDG---- 319 (330)
T ss_dssp ------EEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTT---TSCEEEEEEC-----CCEEEEETTS----
T ss_pred ------eEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccc---cceEEEEEEecCCCceEEEEecCCC----
Confidence 002233345566777788899999999998976643321111 001 222222 467778887643
Q ss_pred eeEEEEeecC
Q 013929 398 FIELNSWVPS 407 (433)
Q Consensus 398 ~~~~~~~~~~ 407 (433)
.+.+|+++
T Consensus 320 --~v~~W~~~ 327 (330)
T 2hes_X 320 --IVNFWSLE 327 (330)
T ss_dssp --EEEEEEC-
T ss_pred --cEEEEEec
Confidence 47778764
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.77 Score=42.17 Aligned_cols=154 Identities=11% Similarity=0.024 Sum_probs=74.7
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCC--
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQT-- 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-- 252 (433)
++..++.|+. ...+.+||..+++-...-..+. ....++.. ++..++.++.+.. .....+.+||..+..
T Consensus 85 ~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 85 FTKYCVTGSA------DYSIKLWDVSNGQCVATWKSPV--PVKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSAT 155 (369)
T ss_dssp TSSEEEEEET------TTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTT
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEEeecCC--CeEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccc
Confidence 3555555543 2358899988876533221111 11222222 4455555543311 122457777766542
Q ss_pred --eEEcCCCCC-----CCc--ceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCC-ce-EecCCCCCCCCCCCCCC
Q 013929 253 --WKVLPSMKN-----PRK--MCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETE-TW-TEIPNMSPARGGAARGT 319 (433)
Q Consensus 253 --W~~~~~~p~-----~r~--~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~-~W-~~~~~~p~~r~~~~~~~ 319 (433)
+......+. ... ....+. -+++.+++|+.+ ..+.+||+.+. .- ..+... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~---~~~v---- 221 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------GKISKYDVSNNYEYVDSIDLH---EKSI---- 221 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-------SEEEEEETTTTTEEEEEEECC---SSCE----
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-------CEEEEEECCCCcEeEEEEecC---CCce----
Confidence 222111110 000 122222 256666666654 25788999873 22 122111 1110
Q ss_pred cCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 320 EMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 320 ~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
..++. -++.+++.++..+.|.+||..+.+-...
T Consensus 222 ---------~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 222 ---------SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp ---------EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ---------eEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 01222 2677777787888999999988765443
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.17 E-value=1.9 Score=44.14 Aligned_cols=149 Identities=11% Similarity=-0.013 Sum_probs=78.9
Q ss_pred ceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCC-CeEEcCCCCCCCc---c
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQ-TWKVLPSMKNPRK---M 265 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r~---~ 265 (433)
...++++|..+++-..+............+.+ +++.++++..+.. .....++++|+.++ ..+.+........ .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA-QNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC-CCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 45699999998876655432111122222222 5553344333322 22457899999988 6655432111110 0
Q ss_pred eeEE-EE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE---CCEEE
Q 013929 266 CSGV-FM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV---NNELY 339 (433)
Q Consensus 266 ~~~~-~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~---~~~ly 339 (433)
...+ .- +|++++.+..++ ...++.+|........+..-..... ..+.. ++.||
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g-----~~~l~~~~~~~~~~~~l~~~~~~v~----------------~~~~~spdg~~l~ 371 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDG-----WNHLYLYDTTGRLIRQVTKGEWEVT----------------NFAGFDPKGTRLY 371 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTS-----SCEEEEEETTSCEEEECCCSSSCEE----------------EEEEECTTSSEEE
T ss_pred CCceeecCCCCEEEEEEccCC-----ccEEEEEECCCCEEEecCCCCeEEE----------------eeeEEcCCCCEEE
Confidence 1122 23 788666554432 3467888877776766643111110 11222 34677
Q ss_pred EEecCCC----eEEEEeCCCCcEEEec
Q 013929 340 AADYADM----EVRKYDKERRLWFTIG 362 (433)
Q Consensus 340 ~~gg~~~----~i~~yd~~~~~W~~v~ 362 (433)
+.+...+ .|+.+|..+++.+.+.
T Consensus 372 ~~~~~~~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 372 FESTEASPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEESSSCTTCBEEEEEETTCCCCEESC
T ss_pred EEecCCCCceEEEEEEEcCCCCceecc
Confidence 6665433 7899999888766554
No 152
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.14 E-value=1.7 Score=39.03 Aligned_cols=190 Identities=9% Similarity=-0.098 Sum_probs=96.3
Q ss_pred EEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC
Q 013929 135 YFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA 213 (433)
Q Consensus 135 ~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~ 213 (433)
++......++.||+.+. ...+..... . ...++. .++.+|+.... ...+++||+.+++.+.+.....
T Consensus 44 ~~~~~~~~i~~~~~~~~-~~~~~~~~~-~-----~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 44 FSDVRQNRTWAWSDDGQ-LSPEMHPSH-H-----QNGHCLNKQGHLIACSHG------LRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp EEEGGGTEEEEEETTSC-EEEEESSCS-S-----EEEEEECTTCCEEEEETT------TTEEEEECSTTCCEEEEECEET
T ss_pred EEeCCCCEEEEEECCCC-eEEEECCCC-C-----cceeeECCCCcEEEEecC------CCeEEEEcCCCCcEEEEeeccC
Confidence 33344567888999887 554432111 0 111222 25678776422 2358999998888765532111
Q ss_pred ----CcceeeEEEeCCEEEEE----ccCC------C-CCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEE
Q 013929 214 ----PRCLFGSASLGEIAILA----GGSD------L-EGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYV 277 (433)
Q Consensus 214 ----~r~~~~~~~~~~~iyv~----GG~~------~-~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv 277 (433)
.+....+..-+++||+. |... . .......++.||+. ++.+.+... .....+.+. -++++++
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RVKPNGLAFLPSGNLLV 187 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CSSEEEEEECTTSCEEE
T ss_pred CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CCCCccEEECCCCCEEE
Confidence 11112222336788886 4311 0 01113478999987 555443211 111122332 2566664
Q ss_pred EccccCCCCcccceEEEEECC-CCce-EecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCC
Q 013929 278 IGGIGGSDSKVLTCGEEYDLE-TETW-TEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKE 354 (433)
Q Consensus 278 ~GG~~~~~~~~~~~v~~yd~~-t~~W-~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~ 354 (433)
.... ...+++||+. +++. ...... ....+ .+..++. -+|+||+.. .+.|.+||+.
T Consensus 188 ~~~~-------~~~i~~~~~~~~g~~~~~~~~~-~~~~~------------~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 188 SDTG-------DNATHRYCLNARGETEYQGVHF-TVEPG------------KTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EETT-------TTEEEEEEECSSSCEEEEEEEE-CCSSS------------CCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred EeCC-------CCeEEEEEECCCCcCcCCCeEe-eCCCC------------CCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 4322 2367889886 5555 211111 00001 0112333 478888876 6789999998
Q ss_pred CCcEEEec
Q 013929 355 RRLWFTIG 362 (433)
Q Consensus 355 ~~~W~~v~ 362 (433)
.+.-..+.
T Consensus 246 g~~~~~~~ 253 (296)
T 3e5z_A 246 GDELGRVL 253 (296)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 65554443
No 153
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.12 E-value=0.31 Score=44.71 Aligned_cols=193 Identities=11% Similarity=0.005 Sum_probs=96.8
Q ss_pred ccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcc
Q 013929 139 HLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRC 216 (433)
Q Consensus 139 ~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~ 216 (433)
....++.||+.+.+...+...+... -..++. .++++|+...... .....+++||+.+++.+. +........
T Consensus 64 ~~~~i~~~d~~~~~~~~~~~~~~~~-----~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 136 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKRPFVSHKAN-----PAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDNLQDIIEDLSTAYC 136 (333)
T ss_dssp TTCEEEEECTTTCCEEEEEECSSSS-----EEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCSCEEEECSSSSCCC
T ss_pred CCCEEEEEeCCCCcEEEEeeCCCCC-----cceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCEEEEEEccCccCCc
Confidence 3456888999888876543111110 111222 2567887753210 112468999999887652 222111111
Q ss_pred eeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECC-EEEEEccccCCCCcccceEE
Q 013929 217 LFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDG-KFYVIGGIGGSDSKVLTCGE 293 (433)
Q Consensus 217 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g-~lyv~GG~~~~~~~~~~~v~ 293 (433)
...++. -++++|+.............++++|+.+.+.+.+..- .......+. -+| .+|+.... ...++
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~-------~~~i~ 207 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT-------ANRLH 207 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG-------GTEEE
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC-------CCeEE
Confidence 122222 2678887643211111235689999988766554210 011122222 244 47776432 23578
Q ss_pred EEECCCC--ceEecC-----CCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 294 EYDLETE--TWTEIP-----NMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 294 ~yd~~t~--~W~~~~-----~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
+||+.++ ....+. ..+.. .. +..++. -+|.+|+.....+.|.+||+....-..+
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~-~~-------------~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGH-EG-------------PDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQI 269 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSS-SE-------------EEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEE
T ss_pred EEEecCCCcCcccccceEEEecCCC-CC-------------CCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEE
Confidence 8988642 332211 11100 00 012333 2578888775567899999965544444
No 154
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.06 E-value=1.9 Score=40.09 Aligned_cols=163 Identities=13% Similarity=0.092 Sum_probs=83.4
Q ss_pred eeEEEEEcCCCceec-CCCCCCCcceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeE
Q 013929 193 HVIYRYSILTNSWSS-GMRMNAPRCLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSG 268 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 268 (433)
..+.+||..+++-.. +.. ... .-.++... ++.+++.|+.++ .+.+||..+.+....- ......-..
T Consensus 176 ~~v~lwd~~~~~~~~~~~~-h~~-~v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~--~~h~~~v~~ 245 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHG-HGA-DVLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAF--ETHESDVNS 245 (354)
T ss_dssp SEEEEEETTTCCEEEEEEC-CSS-CEEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEE--CCCSSCEEE
T ss_pred CcEEEEeCCCCeEEEEEcC-CCC-CeEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEe--cCCCCCeEE
Confidence 358889988876432 111 000 01111221 346777777553 4889999887643321 111111222
Q ss_pred EEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE--ECCEEEEEecC
Q 013929 269 VFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV--VNNELYAADYA 344 (433)
Q Consensus 269 ~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~--~~~~ly~~gg~ 344 (433)
+.+ ++..++.|+.++ .+..||+.+..-...-......... ..+. .++.+++.|+.
T Consensus 246 v~~~p~~~~l~s~s~D~-------~v~lwd~~~~~~~~~~~~~~~~~~~--------------~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDA-------TCRLYDLRADREVAIYSKESIIFGA--------------SSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp EEECTTSSEEEEEETTS-------CEEEEETTTTEEEEEECCTTCCSCE--------------EEEEECTTSSEEEEEET
T ss_pred EEEeCCCCEEEEEeCCC-------eEEEEECCCCcEEEEEcCCCcccce--------------eEEEEeCCCCEEEEEEC
Confidence 222 567777777662 4678998876432211111111110 1222 25778888888
Q ss_pred CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCC
Q 013929 345 DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPK 392 (433)
Q Consensus 345 ~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~ 392 (433)
.+.|.+||..+++= +..+..... .-.+++. .+++.++.|+.+
T Consensus 305 d~~i~vwd~~~~~~--~~~l~~h~~----~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 305 DYTINVWDVLKGSR--VSILFGHEN----RVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp TSCEEEEETTTCSE--EEEECCCSS----CEEEEEECTTSSCEEEEETT
T ss_pred CCcEEEEECCCCce--EEEEECCCC----cEEEEEECCCCCEEEEEcCC
Confidence 89999999877642 222222111 1122332 366777777763
No 155
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.03 E-value=0.97 Score=42.07 Aligned_cols=143 Identities=15% Similarity=0.192 Sum_probs=73.5
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE----CCEEEEEccccCCCCcccceEEEEECCC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM----DGKFYVIGGIGGSDSKVLTCGEEYDLET 299 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~g~lyv~GG~~~~~~~~~~~v~~yd~~t 299 (433)
++..++.|+.+ ..+.+||..+.+-... +......-.++.+ ++.+++.|+.++ .+..||+.+
T Consensus 165 ~~~~l~t~s~D------~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-------~v~~wd~~~ 229 (354)
T 2pbi_B 165 SDMQILTASGD------GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK-------KAMVWDMRS 229 (354)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS-------CEEEEETTT
T ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC-------eEEEEECCC
Confidence 34444555433 4588899888754221 1111111111212 457777787663 478899988
Q ss_pred CceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEE
Q 013929 300 ETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLA 377 (433)
Q Consensus 300 ~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~ 377 (433)
++....-... .... ..+.+ ++.+++.|+..+.+..||..+..-..+-....... . ..+
T Consensus 230 ~~~~~~~~~h--~~~v--------------~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~---~-~~~ 289 (354)
T 2pbi_B 230 GQCVQAFETH--ESDV--------------NSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF---G-ASS 289 (354)
T ss_dssp CCEEEEECCC--SSCE--------------EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCS---C-EEE
T ss_pred CcEEEEecCC--CCCe--------------EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccc---c-eeE
Confidence 7643321110 0010 12222 56778888888999999998775332211111110 0 012
Q ss_pred EE-EeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 378 FR-ACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 378 ~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+. ..++++++.|+.+. .+.+|+..
T Consensus 290 ~~~s~~g~~l~~g~~d~------~i~vwd~~ 314 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDY------TINVWDVL 314 (354)
T ss_dssp EEECTTSSEEEEEETTS------CEEEEETT
T ss_pred EEEeCCCCEEEEEECCC------cEEEEECC
Confidence 22 23577777776532 36677763
No 156
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.92 E-value=0.44 Score=44.59 Aligned_cols=135 Identities=9% Similarity=0.045 Sum_probs=64.2
Q ss_pred eEEEEEcCCCceecCCCCC---CCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcce-eE
Q 013929 194 VIYRYSILTNSWSSGMRMN---APRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMC-SG 268 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p---~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~ 268 (433)
.+.+||..+++-....... ....-.+++.. +++.++.|+.++ .+.+||..+++-... +......- ++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg------~v~iwd~~~~~~~~~--~~~h~~~v~~v 187 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF------SVKVWDLSQKAVLKS--YNAHSSEVNCV 187 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCEEEE
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEEE--EcCCCCCEEEE
Confidence 4788888776543222111 11111222222 566777776543 478899988753221 11111111 22
Q ss_pred EEE-CC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE---CCEEEEEec
Q 013929 269 VFM-DG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV---NNELYAADY 343 (433)
Q Consensus 269 ~~~-~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~---~~~ly~~gg 343 (433)
+.. ++ .+++.++.++ .+.+||+.+.+-............ ...+.. ++.+++.|+
T Consensus 188 ~~s~~~~~~~~s~~~dg-------~v~~wd~~~~~~~~~~~~~~~~~~--------------v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 188 AACPGKDTIFLSCGEDG-------RILLWDTRKPKPATRIDFCASDTI--------------PTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp EECTTCSSCEEEEETTS-------CEEECCTTSSSCBCBCCCTTCCSC--------------EEEEEECTTSTTEEEEEE
T ss_pred EEccCCCceeeeeccCC-------ceEEEECCCCceeeeeeecccccc--------------ccchhhhhcccceEEEee
Confidence 222 33 4666776552 367888877653222111111111 022332 457788888
Q ss_pred CCCeEEEEeCCCCc
Q 013929 344 ADMEVRKYDKERRL 357 (433)
Q Consensus 344 ~~~~i~~yd~~~~~ 357 (433)
..+.|.+||..+.+
T Consensus 247 ~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 247 ETGNVSLVNIKNPD 260 (357)
T ss_dssp SSSCEEEEESSCGG
T ss_pred cccceeEEECCCCc
Confidence 88899999988754
No 157
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.92 E-value=1.6 Score=43.88 Aligned_cols=117 Identities=10% Similarity=0.092 Sum_probs=71.8
Q ss_pred eEEEeCCEEEEEccCCCCCCcCCceEEEeC-CCCC--eEEcCCCCCC--------CcceeEEEECCEEEEEccccCCCCc
Q 013929 219 GSASLGEIAILAGGSDLEGNILSSAEMYNS-ETQT--WKVLPSMKNP--------RKMCSGVFMDGKFYVIGGIGGSDSK 287 (433)
Q Consensus 219 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~~--W~~~~~~p~~--------r~~~~~~~~~g~lyv~GG~~~~~~~ 287 (433)
+-++.++.||+.... ...++.+|. .+++ |+.-...+.. ....+.++.++++|+....
T Consensus 57 ~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------ 124 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN------ 124 (571)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT------
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC------
Confidence 345679999998542 246899999 7765 9874432211 1123456789999987431
Q ss_pred ccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC-----CCeEEEEeCCCCc--E
Q 013929 288 VLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA-----DMEVRKYDKERRL--W 358 (433)
Q Consensus 288 ~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~-----~~~i~~yd~~~~~--W 358 (433)
..++.+|.++++ |+.-..-+...... ..+.++.++.+|+.... .+.|+.||.++++ |
T Consensus 125 --g~l~alD~~tG~~~W~~~~~~~~~~~~~------------~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 125 --GHLLALDAKTGKINWEVEVCDPKVGSTL------------TQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp --SEEEEEETTTCCEEEEEECCCGGGTCBC------------CSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred --CEEEEEECCCCCEEEEecCCCCCcccee------------ccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 357889998874 87532111000000 01345678998876432 5789999998774 8
Q ss_pred EEe
Q 013929 359 FTI 361 (433)
Q Consensus 359 ~~v 361 (433)
+.-
T Consensus 191 ~~~ 193 (571)
T 2ad6_A 191 RAF 193 (571)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 158
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.91 E-value=1.2 Score=41.61 Aligned_cols=144 Identities=9% Similarity=0.037 Sum_probs=78.8
Q ss_pred EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCc-ceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCce
Q 013929 226 IAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRK-MCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETW 302 (433)
Q Consensus 226 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W 302 (433)
.+++.|+.+ ..+.+||..+......-....... -.+++.. ++.+++.|+.+ ..+.+||+.+...
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCEE
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCce
Confidence 456666544 348889998877655433211222 2233333 34677777655 3578899987766
Q ss_pred EecCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEe
Q 013929 303 TEIPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRAC 381 (433)
Q Consensus 303 ~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~ 381 (433)
..+.......... ..++ .-++.+++.|+..+.|..||.....-..+..-.... .+++..
T Consensus 154 ~~~~~~~~~~~~v-------------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v-------~~~~~~ 213 (383)
T 3ei3_B 154 QVFAKTDSWDYWY-------------CCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKV-------THAEFN 213 (383)
T ss_dssp EEEECCCCSSCCE-------------EEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCE-------EEEEEC
T ss_pred EEEeccCCCCCCe-------------EEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcE-------EEEEEC
Confidence 6554322111110 0122 235677788888899999999655444443211111 223332
Q ss_pred -CCE-EEEEcCCCCCCCCeeEEEEeecCC
Q 013929 382 -GDR-LIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 382 -~~~-l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
++. +++.|+.+. .+.+|+...
T Consensus 214 ~~~~~~l~s~~~d~------~i~iwd~~~ 236 (383)
T 3ei3_B 214 PRCDWLMATSSVDA------TVKLWDLRN 236 (383)
T ss_dssp SSCTTEEEEEETTS------EEEEEEGGG
T ss_pred CCCCCEEEEEeCCC------EEEEEeCCC
Confidence 344 777776532 467777754
No 159
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.90 E-value=1.1 Score=46.13 Aligned_cols=116 Identities=15% Similarity=0.126 Sum_probs=73.0
Q ss_pred eEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCCC--------CcceeEEEECCEEEEEccccCCCCcc
Q 013929 219 GSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKNP--------RKMCSGVFMDGKFYVIGGIGGSDSKV 288 (433)
Q Consensus 219 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~g~lyv~GG~~~~~~~~ 288 (433)
+-++.++.||+... ...++.+|..+++ |+.-...+.. ....+.++.+++||+....
T Consensus 72 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------- 137 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------- 137 (677)
T ss_dssp CCEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-------
T ss_pred CCEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-------
Confidence 34567999999853 3568999998875 9875443211 1223456788999887321
Q ss_pred cceEEEEECCCCc--eEecCC-CCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEec-----CCCeEEEEeCCCCc--E
Q 013929 289 LTCGEEYDLETET--WTEIPN-MSPARGGAARGTEMPASAEAPPLVAVVNNELYAADY-----ADMEVRKYDKERRL--W 358 (433)
Q Consensus 289 ~~~v~~yd~~t~~--W~~~~~-~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg-----~~~~i~~yd~~~~~--W 358 (433)
..++.+|.++++ |+.-.. -...... ...+.++.++.+|+..+ ..+.|+.||.++++ |
T Consensus 138 -g~l~alD~~tG~~~W~~~~~~~~~~~~~------------~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 138 -GRLIALDAATGKEVWHQNTFEGQKGSLT------------ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp -SEEEEEETTTCCEEEEEETTTTCCSSCB------------CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred -CEEEEEECCCCCEEeeecCCcCcCcCcc------------cccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 357889998875 876432 1110000 00134567899887643 25789999998875 8
Q ss_pred EEe
Q 013929 359 FTI 361 (433)
Q Consensus 359 ~~v 361 (433)
+.-
T Consensus 205 ~~~ 207 (677)
T 1kb0_A 205 RWF 207 (677)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 160
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.89 E-value=4 Score=41.84 Aligned_cols=117 Identities=13% Similarity=0.088 Sum_probs=71.9
Q ss_pred EEECCEEEEECCCCCCcccceeEEEEEcCCCc--eecCCCCCCC--------cceeeEEEeCCEEEEEccCCCCCCcCCc
Q 013929 173 LAVGTELLVFGRELTAHHISHVIYRYSILTNS--WSSGMRMNAP--------RCLFGSASLGEIAILAGGSDLEGNILSS 242 (433)
Q Consensus 173 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 242 (433)
++.++.||+... ...++.+|..|++ |+.-...+.. ....+.++.+++||+... -..
T Consensus 63 ~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~ 128 (668)
T 1kv9_A 63 LFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGR 128 (668)
T ss_dssp EEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSE
T ss_pred EEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCE
Confidence 567999999863 2368999998875 8754332211 011234567889988631 246
Q ss_pred eEEEeCCCCC--eEEcCCCCC--CCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCc--eEec
Q 013929 243 AEMYNSETQT--WKVLPSMKN--PRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEI 305 (433)
Q Consensus 243 ~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~ 305 (433)
++.+|..+++ |+.-..-+. .....+.++.++++|+..+.. .......++.||+++++ |+.-
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~--~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGA--EYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCT--TTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCC--CcCCCCEEEEEECCCCcEEEEec
Confidence 8999999886 876432111 112234456789888753321 11123568999999875 8753
No 161
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.87 E-value=1.1 Score=42.42 Aligned_cols=227 Identities=17% Similarity=0.136 Sum_probs=103.7
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR 210 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 210 (433)
+|........+..||..+.+-...-. . |...-..+.. ++..++.|+. ...+.+||..+++....-.
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~--~----h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQ--G----HEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC--C----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEc--c----CCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCCeeEEEEE
Confidence 34444444567778887655432210 0 1111111222 3444455543 2458889998876432211
Q ss_pred CCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE-cCCCC---CC-CcceeEEEE--CCEEEEEccc
Q 013929 211 MNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKV-LPSMK---NP-RKMCSGVFM--DGKFYVIGGI 281 (433)
Q Consensus 211 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p---~~-r~~~~~~~~--~g~lyv~GG~ 281 (433)
.. .....++.. ++++++.|+.++ .+.+||..+..-.. +.... .. ...-..+.+ +++.++.|+.
T Consensus 205 ~~--~~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 205 IE--DGVTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp CS--SCEEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred cC--CCcEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 11 111222222 567777777553 47889988775422 21111 11 111122222 5677777776
Q ss_pred cCCCCcccceEEEEECCCCceEecCCCCCC------CCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCC
Q 013929 282 GGSDSKVLTCGEEYDLETETWTEIPNMSPA------RGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKE 354 (433)
Q Consensus 282 ~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~------r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~ 354 (433)
+ ..+.+||+.+..-......+.. ..+|.. .-.+++. .++..++.|+..+.|..||..
T Consensus 277 d-------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 277 D-------RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD---------FVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp T-------SEEEEEEC---------------CEEEEEECCSS---------CEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred C-------CEEEEEECCCCCCcccccCCCCCcceEEEecccC---------cEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 5 2467788765432111000000 001100 0001121 245666778888899999998
Q ss_pred CCcEEEeccCCCcccCCCcccEEEEEe-------CCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 355 RRLWFTIGRLPERANSMNGWGLAFRAC-------GDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 355 ~~~W~~v~~lp~~~~~~~~~~~~~~~~-------~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+++-.. .+..... .-.+++.. ++.+++.||.+. .+.+|++.
T Consensus 341 ~~~~~~--~l~~h~~----~v~~v~~~~~~~~~p~~~~l~sgs~Dg------~i~iW~~~ 388 (393)
T 1erj_A 341 SGNPLL--MLQGHRN----SVISVAVANGSSLGPEYNVFATGSGDC------KARIWKYK 388 (393)
T ss_dssp TCCEEE--EEECCSS----CEEEEEECSSCTTCTTCEEEEEEETTS------EEEEEEEE
T ss_pred CCeEEE--EECCCCC----CEEEEEecCCcCcCCCCCEEEEECCCC------cEEECccc
Confidence 875322 1221111 11233332 367888887643 46777764
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.79 E-value=1.4 Score=40.22 Aligned_cols=146 Identities=14% Similarity=0.082 Sum_probs=69.2
Q ss_pred eccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-EC-CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC--
Q 013929 138 CHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VG-TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA-- 213 (433)
Q Consensus 138 ~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-- 213 (433)
.....+.++|+.+.+....-..+.... ...++. .+ ..+|+.+.. ...+++||+.+++-...-..+.
T Consensus 18 ~~~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~~~~~~~~~~~~ 87 (349)
T 1jmx_B 18 NYPNNLHVVDVASDTVYKSCVMPDKFG----PGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCKNTFHANLSSVP 87 (349)
T ss_dssp ETTTEEEEEETTTTEEEEEEECSSCCS----SCEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEESCCST
T ss_pred CCCCeEEEEECCCCcEEEEEecCCCCC----CceeEECCCCCEEEEEeCC------CCcEEEEeCCCCcEEEEEEccccc
Confidence 345678899998876543322222000 111222 23 357777632 3468999999886542211111
Q ss_pred ---CcceeeEEEe-CC-EEEEEccC--CCCCCc---CCceEEEeCCCCCeEE-cCCCCCCCcceeEE-EECCEEEEEccc
Q 013929 214 ---PRCLFGSASL-GE-IAILAGGS--DLEGNI---LSSAEMYNSETQTWKV-LPSMKNPRKMCSGV-FMDGKFYVIGGI 281 (433)
Q Consensus 214 ---~r~~~~~~~~-~~-~iyv~GG~--~~~~~~---~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~-~~~g~lyv~GG~ 281 (433)
......++.. ++ +||+.+.. .....+ ...+.+||+.+++-.. +...+.++...+++ .-+|++|+.++
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~- 166 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGP- 166 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESS-
T ss_pred ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccC-
Confidence 1111222322 34 56665421 000001 2578999988743211 11111122222222 23667777421
Q ss_pred cCCCCcccceEEEEECCCCceE
Q 013929 282 GGSDSKVLTCGEEYDLETETWT 303 (433)
Q Consensus 282 ~~~~~~~~~~v~~yd~~t~~W~ 303 (433)
.+.+||+.+++-.
T Consensus 167 ---------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 167 ---------DIYKMDVKTGKYT 179 (349)
T ss_dssp ---------SEEEECTTTCCEE
T ss_pred ---------cEEEEeCCCCcee
Confidence 2788888877643
No 163
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.78 E-value=2.1 Score=38.13 Aligned_cols=141 Identities=14% Similarity=0.159 Sum_probs=70.2
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceE
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWT 303 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 303 (433)
++..++.|+.+ ..+.+||..+.. ..+..............-++. ++.|+.+ ..+.+||+.+.+-.
T Consensus 154 ~~~~l~~~~~d------~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~d-------g~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTASAD------KTIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSND-------GLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEETT------SCEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEETT-------SEEEEEETTTCCEE
T ss_pred CCCEEEEEECC------CCEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccCC-------CeEEEEECCchhhh
Confidence 55566666544 347788833221 112111111112222334677 6666654 25788999876532
Q ss_pred ecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-e
Q 013929 304 EIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-C 381 (433)
Q Consensus 304 ~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~ 381 (433)
.. +....... ..++.. ++ .++.++..+.|.+||..+++-...-..+.... .+++. .
T Consensus 219 ~~--~~~~~~~i-------------~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i------~~~~~~~ 276 (313)
T 3odt_A 219 RT--YEGHESFV-------------YCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISI------WSVDCMS 276 (313)
T ss_dssp EE--EECCSSCE-------------EEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCE------EEEEECT
T ss_pred hh--hhcCCceE-------------EEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceE------EEEEEcc
Confidence 21 11001110 023333 44 46667788999999999887554433332221 22333 3
Q ss_pred CCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 382 GDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 382 ~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+++ ++.|+.++ .+.+|+++.
T Consensus 277 ~~~-~~~~~~dg------~i~iw~~~~ 296 (313)
T 3odt_A 277 NGD-IIVGSSDN------LVRIFSQEK 296 (313)
T ss_dssp TSC-EEEEETTS------CEEEEESCG
T ss_pred CCC-EEEEeCCC------cEEEEeCCC
Confidence 556 44565532 377888753
No 164
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.73 E-value=2.4 Score=38.48 Aligned_cols=146 Identities=15% Similarity=0.053 Sum_probs=73.5
Q ss_pred CCE-EEEECCCCCCcccceeEEEEEc-CCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC-
Q 013929 176 GTE-LLVFGRELTAHHISHVIYRYSI-LTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT- 252 (433)
Q Consensus 176 ~~~-iyv~GG~~~~~~~~~~~~~yd~-~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~- 252 (433)
++. .++.|+. ...+.+||. .+++...+...+....-.+++...+.+++.|+.+ ..+.+||..+..
T Consensus 67 ~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 67 NTDLQIYVGTV------QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGD 134 (342)
T ss_dssp SSSEEEEEEET------TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTT
T ss_pred CCCcEEEEEcC------CCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEccccccc
Confidence 555 5666654 235899999 8887766544212222223333324555555543 347777766400
Q ss_pred ------eEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCC-Cc--eEecCCCCCCCCCCCCCCcCCC
Q 013929 253 ------WKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLET-ET--WTEIPNMSPARGGAARGTEMPA 323 (433)
Q Consensus 253 ------W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t-~~--W~~~~~~p~~r~~~~~~~~~~~ 323 (433)
.+.+..+.....-.++....+. +++|+.+ ..+.+||+.+ .. ...... +.....
T Consensus 135 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~-~~~~~i--------- 196 (342)
T 1yfq_A 135 GVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN-------SQVQWFRLPLCEDDNGTIEES-GLKYQI--------- 196 (342)
T ss_dssp BCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST-------TEEEEEESSCCTTCCCEEEEC-SCSSCE---------
T ss_pred ccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC-------CeEEEEECCccccccceeeec-CCCCce---------
Confidence 1222222222222233344455 5555443 3578899887 33 222111 101001
Q ss_pred CcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 013929 324 SAEAPPLVAVV--NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 324 ~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
..++.. ++.+++.|+..+.+.+||....
T Consensus 197 -----~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 197 -----RDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp -----EEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred -----eEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 123333 5778888888888888777554
No 165
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.70 E-value=0.24 Score=45.41 Aligned_cols=202 Identities=12% Similarity=0.116 Sum_probs=94.5
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCc-ceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPR-CLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++..++.|+. ...+.+||..+++...+..+.... .-.+++.. ++.+++.|+.+ ..+.+||..+.
T Consensus 24 ~g~~lasgs~------D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd~~~~ 91 (316)
T 3bg1_A 24 YGTRLATCSS------DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWREENG 91 (316)
T ss_dssp GGCEEEEEET------TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT------SCEEEECCSSS
T ss_pred CCCEEEEEeC------CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEECCCC
Confidence 3445555543 235788888766533222221111 11222222 25666777655 34788999887
Q ss_pred CeEEcCCCCCCCcce-eEEEE-C--CEEEEEccccCCCCcccceEEEEECCCC-ceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 252 TWKVLPSMKNPRKMC-SGVFM-D--GKFYVIGGIGGSDSKVLTCGEEYDLETE-TWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~-~~~~~-~--g~lyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
.|..+..+......- +++.. + +.+++.|+.++ .+..||..+. .|.....+.........+...+..
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-------~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-- 162 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-------AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV-- 162 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-------CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC--
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-------CEEEEecCCCCCcceeeeeccccCCcceEEEcccc--
Confidence 775443222222111 22222 2 56677776652 3677887765 565433221111000000000000
Q ss_pred CCCEEE-------EECCEEEEEecCCCeEEEEeCCC-CcEEEeccCCCcccCCCcccEEEEEe-C----CEEEEEcCCCC
Q 013929 327 APPLVA-------VVNNELYAADYADMEVRKYDKER-RLWFTIGRLPERANSMNGWGLAFRAC-G----DRLIVIGGPKA 393 (433)
Q Consensus 327 ~~~~~~-------~~~~~ly~~gg~~~~i~~yd~~~-~~W~~v~~lp~~~~~~~~~~~~~~~~-~----~~l~v~GG~~~ 393 (433)
...... ...+++++.|+..+.|..||..+ +.|..+..+..... .-.+++.. + +.+++.|+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~----~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD----WVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS----CEEEEECCCCSSCSCCEEEEEETTC
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC----ceEEEEecCCCCCCCceEEEEcCCC
Confidence 000000 00135677788888899999874 46877765543321 11222221 2 25666666532
Q ss_pred CCCCeeEEEEeecCC
Q 013929 394 SGEGFIELNSWVPSE 408 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~ 408 (433)
.+.+|+.+.
T Consensus 239 ------~v~iw~~~~ 247 (316)
T 3bg1_A 239 ------RVFIWTCDD 247 (316)
T ss_dssp ------EEEEEECSS
T ss_pred ------eEEEEEccC
Confidence 366777643
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.61 E-value=1.4 Score=44.86 Aligned_cols=190 Identities=12% Similarity=-0.068 Sum_probs=101.6
Q ss_pred ceEEEEecCC------CcEEeCC-CCCCccccccCCceEEEECCEEEEECCCCCCcc--cceeEEEEEcC-CC---ceec
Q 013929 141 LEWEAFDPIR------RRWMHLP-RMTSNECFMCSDKESLAVGTELLVFGRELTAHH--ISHVIYRYSIL-TN---SWSS 207 (433)
Q Consensus 141 ~~~~~yd~~~------~~W~~l~-~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~-t~---~W~~ 207 (433)
..++.+|..+ .....+. .-+... ......-+++.+++........ ....++++|.. ++ +.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFV-----TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEE-----CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcc-----cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 4688888887 5655554 221100 0111223454333332211110 23579999998 56 3433
Q ss_pred CCCCCCCcceeeEE-EeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCC----c---ceeEEEE-CCEEEEE
Q 013929 208 GMRMNAPRCLFGSA-SLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPR----K---MCSGVFM-DGKFYVI 278 (433)
Q Consensus 208 ~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r----~---~~~~~~~-~g~lyv~ 278 (433)
+..-. .......+ .-++++|+.+..++ ...++++|+.++.++.+....... + ....+.. ++++++.
T Consensus 236 l~~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 236 LLGGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp EEEET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred eCCCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE
Confidence 32211 11112222 23677777665432 347999999899998876532211 1 1123333 6777776
Q ss_pred ccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE-EEECCEEEEEecCC---CeEEEEeCC
Q 013929 279 GGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV-AVVNNELYAADYAD---MEVRKYDKE 354 (433)
Q Consensus 279 GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~-~~~~~~ly~~gg~~---~~i~~yd~~ 354 (433)
+.. + ...++.+|+.++..+.+.... ... ..+ ...++.+++..+.. ..++.+|..
T Consensus 311 ~~~-~-----~~~l~~~d~~~~~~~~l~~~~---~~~-------------~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~ 368 (662)
T 3azo_A 311 HGK-G-----AAVLGILDPESGELVDAAGPW---TEW-------------AATLTVSGTRAVGVAASPRTAYEVVELDTV 368 (662)
T ss_dssp EBS-S-----SCEEEEEETTTTEEEECCSSC---CEE-------------EEEEEEETTEEEEEEEETTEEEEEEEEETT
T ss_pred EEc-C-----ccEEEEEECCCCcEEEecCCC---CeE-------------EEEEecCCCEEEEEEcCCCCCCEEEEEECC
Confidence 543 2 345788899888877764321 110 023 34466666664322 478999999
Q ss_pred CCcEEEec
Q 013929 355 RRLWFTIG 362 (433)
Q Consensus 355 ~~~W~~v~ 362 (433)
+++.+.+.
T Consensus 369 ~g~~~~l~ 376 (662)
T 3azo_A 369 TGRARTIG 376 (662)
T ss_dssp TCCEEEEE
T ss_pred CCceEEee
Confidence 99888774
No 167
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.56 E-value=2.7 Score=38.42 Aligned_cols=148 Identities=7% Similarity=-0.026 Sum_probs=85.7
Q ss_pred ECCEEEEECCCCCCcccceeEEEEEcCCCceecCC--CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGM--RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
.++.||+.-.. .+.+.++|+....-+.+. .+..| ..+++ .+++||+..-. ....++++++..
T Consensus 87 ~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~-----~~~~I~~~~~dG 152 (316)
T 1ijq_A 87 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----TPAKIKKGGLNG 152 (316)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-----SSCEEEEEETTS
T ss_pred cCCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC-----CCCeEEEEcCCC
Confidence 36899987432 346888998755433221 22222 23344 37899998421 125689999875
Q ss_pred CCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 251 QTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 251 ~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
..-+.+.... .....+.++- +++||+.-. ....|+++|+....-+.+...... . ..+
T Consensus 153 ~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~-------~~~~I~~~d~dg~~~~~~~~~~~~-~------------~~P 211 (316)
T 1ijq_A 153 VDIYSLVTEN-IQWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEKR-L------------AHP 211 (316)
T ss_dssp CCEEEEECSS-CSCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEEECTTT-T------------SSE
T ss_pred CCeEEEEECC-CCCceEEEEeccCCEEEEEEC-------CCCeEEEEecCCCceEEEeecCCc-c------------CCc
Confidence 5433332211 1222344443 689999832 235789999875433332111100 0 112
Q ss_pred CEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 329 PLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 329 ~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.++++.++.||+.....+.|.++|+.+++
T Consensus 212 ~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 212 FSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 36777899999998878899999987664
No 168
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.55 E-value=1.3 Score=40.36 Aligned_cols=143 Identities=10% Similarity=0.058 Sum_probs=74.2
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCc--eecCCCCCCCcceeeEE-------EeCCEEEEEccCCCCCCcCCceEEEe
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNS--WSSGMRMNAPRCLFGSA-------SLGEIAILAGGSDLEGNILSSAEMYN 247 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~~~~~yd 247 (433)
+.+++.|+. ...+.+||..+++ -..+..... .-.++. .-++..++.|+.+ ..+.+||
T Consensus 80 ~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd 145 (357)
T 3i2n_A 80 QRYLATGDF------GGNLHIWNLEAPEMPVYSVKGHKE--IINAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWD 145 (357)
T ss_dssp TCCEEEEET------TSCEEEECTTSCSSCSEEECCCSS--CEEEEEEESGGGCC-CCCEEEEEETT------SCEEEEC
T ss_pred CceEEEecC------CCeEEEEeCCCCCccEEEEEeccc--ceEEEeeccccccCCCccEEEEEeCC------CeEEEEe
Confidence 355555543 2358888888765 122211111 111111 1245566666644 3488899
Q ss_pred CCCCC--eEEcCCCCC--CCcceeEE-----EECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCC
Q 013929 248 SETQT--WKVLPSMKN--PRKMCSGV-----FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARG 318 (433)
Q Consensus 248 ~~t~~--W~~~~~~p~--~r~~~~~~-----~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~ 318 (433)
..+.. ...+..... .+.....+ .-++.+++.|+.+ ..+..||+.+..-......... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~--v---- 212 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------GDIKLFDLRNMALRWETNIKNG--V---- 212 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------SEEEEEETTTTEEEEEEECSSC--E----
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------CeEEEEECccCceeeecCCCCc--e----
Confidence 88764 333332221 11122222 1467777777654 2578899988764332111111 1
Q ss_pred CcCCCCcCCCCEEEEE----CCEEEEEecCCCeEEEEeCCCC
Q 013929 319 TEMPASAEAPPLVAVV----NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 319 ~~~~~~~~~~~~~~~~----~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
..+... ++..++.|+..+.|..||..++
T Consensus 213 ----------~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 213 ----------CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp ----------EEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred ----------EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 023332 5677778888889999997653
No 169
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.53 E-value=0.47 Score=44.09 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=53.5
Q ss_pred EEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCC-EEEEEccCCCCCCcCCceEEEeCCCCCeEEc
Q 013929 179 LLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGE-IAILAGGSDLEGNILSSAEMYNSETQTWKVL 256 (433)
Q Consensus 179 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 256 (433)
.+++|.+.......-.+|.+|+.+++++.+... .......++. -++ .||+.+.... ....-.++.+|..++..+.+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~-~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSK-DQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSS-TTCEEEEEEEETTTTEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCC-CCCcEEEEEEeCCCCcEEEe
Confidence 334565543322233466778888888765443 1111112222 234 5777654321 11122345556666777766
Q ss_pred CCCCCCCcc-eeEEEECCEEEEEccccCCCCcccceEEEEECCCC
Q 013929 257 PSMKNPRKM-CSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETE 300 (433)
Q Consensus 257 ~~~p~~r~~-~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~ 300 (433)
...+..... ...+. +++..++..+. -..+.+|++.++
T Consensus 93 ~~~~~~~~~p~~~~~-dg~~l~~~~~~------~~~v~~~~~~~~ 130 (361)
T 3scy_A 93 NTQKTMGADPCYLTT-NGKNIVTANYS------GGSITVFPIGQD 130 (361)
T ss_dssp EEEECSSSCEEEEEE-CSSEEEEEETT------TTEEEEEEBCTT
T ss_pred eEeccCCCCcEEEEE-CCCEEEEEECC------CCEEEEEEeCCC
Confidence 544322222 23333 66543343322 135778887643
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.53 E-value=1.1 Score=41.76 Aligned_cols=153 Identities=10% Similarity=0.013 Sum_probs=78.6
Q ss_pred ceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEE-
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGV- 269 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~- 269 (433)
...++++|..+++-+.+..-+ ....+....- +++.+++............++.+|..+...+.+............+
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceE
Confidence 357999999988766553221 1222333333 4554443332221123468999999887777665433211111122
Q ss_pred EECCE-EEEEccccCCCCcccceEEEEECCCCceEecCCCCCC------CCCCCCCCcCCCCcCCCCEEEEECC-EEEEE
Q 013929 270 FMDGK-FYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPA------RGGAARGTEMPASAEAPPLVAVVNN-ELYAA 341 (433)
Q Consensus 270 ~~~g~-lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~------r~~~~~~~~~~~~~~~~~~~~~~~~-~ly~~ 341 (433)
.-+|+ |+......+ .....+++||+.+++-+.+...+.. ..+ ....-+| .|++.
T Consensus 246 spdg~~l~~~~~~~~---~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~---------------~~~spdg~~l~~~ 307 (388)
T 3pe7_A 246 VPDGSALVYVSYLKG---SPDRFIYSADPETLENRQLTSMPACSHLMSNYDG---------------SLMVGDGSDAPVD 307 (388)
T ss_dssp CTTSSCEEEEEEETT---CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTS---------------SEEEEEECCC---
T ss_pred CCCCCEEEEEecCCC---CCcceEEEEecCCCceEEEEcCCCceeeeecCCC---------------CeEccCCCcceeE
Confidence 22565 444332221 1123589999999887665443320 011 1222333 33332
Q ss_pred e--------cCCCeEEEEeCCCCcEEEecc
Q 013929 342 D--------YADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 342 g--------g~~~~i~~yd~~~~~W~~v~~ 363 (433)
. .....|+.+|..+++-+.+..
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEE
T ss_pred eeeccccccCCCCEEEEEeccCCceEEecc
Confidence 1 235689999999988777653
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.49 E-value=0.19 Score=46.25 Aligned_cols=154 Identities=12% Similarity=0.029 Sum_probs=83.7
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++.||+.+.. ...+++||+.+++.+.+...+ .....+++. -++++|+....+.. ....+++||+.+...+
T Consensus 55 ~g~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 55 QGQLFLLDVF------EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFK--STGGIFAATENGDNLQ 125 (333)
T ss_dssp TSCEEEEETT------TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSS--SCCEEEEECTTSCSCE
T ss_pred CCCEEEEECC------CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCC--CCceEEEEeCCCCEEE
Confidence 5678877643 236899999998876543111 112233333 26788887532211 1257899999988765
Q ss_pred E-cCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 255 V-LPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 255 ~-~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
. +............+. -+|++|+..... ........++.||+.+++...+... .... ..++
T Consensus 126 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~-------------~~i~ 188 (333)
T 2dg1_A 126 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRG-YSTNPLGGVYYVSPDFRTVTPIIQN---ISVA-------------NGIA 188 (333)
T ss_dssp EEECSSSSCCCEEEEEECTTSCEEEEECCC-BTTBCCEEEEEECTTSCCEEEEEEE---ESSE-------------EEEE
T ss_pred EEEccCccCCcccceEECCCCCEEEEeccc-cccCCCceEEEEeCCCCEEEEeecC---CCcc-------------cceE
Confidence 3 222211111122222 267888764321 1111235688999887776654210 0000 1233
Q ss_pred EE-CC-EEEEEecCCCeEEEEeCCC
Q 013929 333 VV-NN-ELYAADYADMEVRKYDKER 355 (433)
Q Consensus 333 ~~-~~-~ly~~gg~~~~i~~yd~~~ 355 (433)
.. ++ .||+.....+.|++||..+
T Consensus 189 ~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 189 LSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ECCCCCEEEEEeCCCCeEEEEEecC
Confidence 22 44 5888876667899999854
No 172
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.49 E-value=1.7 Score=40.93 Aligned_cols=157 Identities=12% Similarity=0.091 Sum_probs=79.0
Q ss_pred EEEEECCCCCCcccceeEEEEEcCCCceecCCC-CCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 178 ELLVFGRELTAHHISHVIYRYSILTNSWSSGMR-MNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 178 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
.+++.|+. ...+.+||..+++....-. ......-.+++.. ++.+++.|+.+ ..+.+||+.+..-..
T Consensus 145 ~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~ 212 (402)
T 2aq5_A 145 NVLLSAGC------DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVA 212 (402)
T ss_dssp TEEEEEET------TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEE
T ss_pred CEEEEEcC------CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceee
Confidence 46666654 2358899998876542210 1111112222222 56666666643 458899998875422
Q ss_pred c--CCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCce-EecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 256 L--PSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETW-TEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 256 ~--~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W-~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
. ......+.......-++++++.|... ..-..+.+||+.+..- .....+...... ..++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~----~~d~~i~iwd~~~~~~~~~~~~~~~~~~v--------------~~~~ 274 (402)
T 2aq5_A 213 EKDRPHEGTRPVHAVFVSEGKILTTGFSR----MSERQVALWDTKHLEEPLSLQELDTSSGV--------------LLPF 274 (402)
T ss_dssp EEECSSCSSSCCEEEECSTTEEEEEEECT----TCCEEEEEEETTBCSSCSEEEECCCCSSC--------------EEEE
T ss_pred eeccCCCCCcceEEEEcCCCcEEEEeccC----CCCceEEEEcCccccCCceEEeccCCCce--------------eEEE
Confidence 1 11111111222223467777776211 0124678899877532 000011111111 1223
Q ss_pred EE--CCEEEEEecCCCeEEEEeCCCCc--EEEeccC
Q 013929 333 VV--NNELYAADYADMEVRKYDKERRL--WFTIGRL 364 (433)
Q Consensus 333 ~~--~~~ly~~gg~~~~i~~yd~~~~~--W~~v~~l 364 (433)
.. +..+++.|+..+.|.+||..+++ -..+...
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 22 34566677678899999998876 5555443
No 173
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.48 E-value=1.7 Score=39.46 Aligned_cols=52 Identities=8% Similarity=0.180 Sum_probs=33.8
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCc-ccCCCcccEEEEEeCCEEEEEcCCCC
Q 013929 335 NNELYAADYADMEVRKYDKERRLWFTIGRLPER-ANSMNGWGLAFRACGDRLIVIGGPKA 393 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~-~~~~~~~~~~~~~~~~~l~v~GG~~~ 393 (433)
++.+++.|+..+.|.+||..+++-.. .+... .. .-.+++ .++++++.|+.++
T Consensus 262 ~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~h~~----~v~~~~-~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 262 RHKFLYTAGSDGIISCWNLQTRKKIK--NFAKFNED----SVVKIA-CSDNILCLATSDD 314 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEE--ECCCCSSS----EEEEEE-ECSSEEEEEEECT
T ss_pred CCCEEEEecCCceEEEEcCccHhHhh--hhhcccCC----CceEec-CCCCeEEEEecCC
Confidence 57777788888899999998876432 23322 11 113444 7888888887654
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.44 E-value=0.39 Score=45.00 Aligned_cols=149 Identities=9% Similarity=-0.019 Sum_probs=78.9
Q ss_pred ceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCE-EEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcce-eE
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEI-AILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMC-SG 268 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~ 268 (433)
...++++|..+++.+.+...+ ....+....- ++. |++... .........++++|..+..++.+.. ..+.... ..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHE 243 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCccccce
Confidence 456899999988876554211 1112222222 343 544432 2111123579999998888877755 2111111 12
Q ss_pred EE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEec---
Q 013929 269 VF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADY--- 343 (433)
Q Consensus 269 ~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg--- 343 (433)
+. -+|+.+++...... .....+++||+.+++...+...+. . .....- +++++++.+
T Consensus 244 ~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~----~-------------~~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVMVMPP----C-------------SHLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp EECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEEECCS----E-------------EEEEECSSSSEEEEEECCC
T ss_pred EECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEeeeCCC----C-------------CCCccCCCCceEEEecCCc
Confidence 22 25553333332211 112348999999888766543321 1 012233 666666532
Q ss_pred -------------CCCeEEEEeCCCCcEEEec
Q 013929 344 -------------ADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 344 -------------~~~~i~~yd~~~~~W~~v~ 362 (433)
....|+.+|+.+++.+.+.
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred ceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 2368999999988766654
No 175
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.43 E-value=3.4 Score=41.01 Aligned_cols=143 Identities=14% Similarity=0.120 Sum_probs=77.7
Q ss_pred CEEEEEccC-CCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 225 EIAILAGGS-DLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 225 ~~iyv~GG~-~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
+..++.|+. + ..+.+||..+..... ..+......-..+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 456 ~~~l~~~~~~d------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-------~i~iw~~~~~~ 521 (615)
T 1pgu_A 456 QNYVAVGLEEG------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMG-------KILLYDLQSRE 521 (615)
T ss_dssp SSEEEEEETTT------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTE
T ss_pred CCEEEEeecCC------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCC-------eEEEeeCCCCc
Confidence 555566654 3 358899998876543 222222222233333 778888887652 47889998765
Q ss_pred eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE------------CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCccc
Q 013929 302 WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV------------NNELYAADYADMEVRKYDKERRLWFTIGRLPERAN 369 (433)
Q Consensus 302 W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~------------~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~ 369 (433)
-... +....... -..+.+ ++++++.|+..+.|.+||..+.. +.+..+.....
T Consensus 522 ~~~~--~~~~h~~~-------------v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~h~~ 585 (615)
T 1pgu_A 522 VKTS--RWAFRTSK-------------INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKD 585 (615)
T ss_dssp EEEC--CSCCCSSC-------------EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-CCEEETTSSTT
T ss_pred ceeE--eecCCCCc-------------eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-eechhhhcCcc
Confidence 4322 22101110 022233 67888888888999999998862 11112222111
Q ss_pred CCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 370 SMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 370 ~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
. ........+++ ++.||.++ .+.+|+++
T Consensus 586 ~---v~~l~~s~~~~-l~s~~~d~------~v~iw~~~ 613 (615)
T 1pgu_A 586 G---VNNLLWETPST-LVSSGADA------CIKRWNVV 613 (615)
T ss_dssp C---EEEEEEEETTE-EEEEETTS------CEEEEEEC
T ss_pred c---eEEEEEcCCCC-eEEecCCc------eEEEEeee
Confidence 1 01222345677 77776533 37777774
No 176
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=94.39 E-value=0.012 Score=59.70 Aligned_cols=37 Identities=8% Similarity=0.078 Sum_probs=29.1
Q ss_pred CCCCCCCchhHHHhhccccC-cccchhhhhhcHHHHHh
Q 013929 78 DSLIQPIGRDNSISCLIRCS-RSDYGSIASLNQSFRSL 114 (433)
Q Consensus 78 ~~~~~~LP~dl~~~iL~rlP-~~~~~~~~~V~k~w~~l 114 (433)
...|..||+|++..||.+|| .....+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35688899999999999999 89999999999999988
No 177
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.38 E-value=1.2 Score=41.36 Aligned_cols=137 Identities=9% Similarity=0.007 Sum_probs=69.1
Q ss_pred eeEEEEEcCCCceecCCCC---CCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeE
Q 013929 193 HVIYRYSILTNSWSSGMRM---NAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSG 268 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 268 (433)
..+.+||..+++-...... .....-.+++.. +++.++.|+.++ .+.++|..+++-.. .+......-..
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~~h~~~V~~ 174 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI------CIKVWDLAQQVVLS--SYRAHAAQVTC 174 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEE--EECCCSSCEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEE--EEcCcCCceEE
Confidence 3588899887753221110 011111222222 667777776553 48889998864321 12111111122
Q ss_pred EEE--CC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEec
Q 013929 269 VFM--DG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADY 343 (433)
Q Consensus 269 ~~~--~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg 343 (433)
+.+ ++ .+++.|+.++ .+.+||+.+.+-...-......... .+++.. ++++++.|+
T Consensus 175 ~~~~~~~~~~l~s~s~D~-------~v~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDN-------RILLWDTRCPKPASQIGCSAPGYLP-------------TSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp EEECSSCTTEEEEEETTS-------CEEEEETTSSSCEEECC----CCCE-------------EEEEECSSCTTEEEEEE
T ss_pred EEecCCCCCceeeecccc-------ccccccccccceeeeeecceeeccc-------------eeeeecCCCCcceEEec
Confidence 222 33 4677777652 4788999876533221111111110 012222 567888888
Q ss_pred CCCeEEEEeCCCCc
Q 013929 344 ADMEVRKYDKERRL 357 (433)
Q Consensus 344 ~~~~i~~yd~~~~~ 357 (433)
..+.|.+||..+++
T Consensus 235 ~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 235 ENGTVSLVDTKSTS 248 (344)
T ss_dssp TTSEEEEEESCC--
T ss_pred cCCcEEEEECCCCc
Confidence 88999999988754
No 178
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.38 E-value=0.52 Score=42.73 Aligned_cols=148 Identities=10% Similarity=-0.009 Sum_probs=78.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++.+|+..-. ...+++||+.+++.+.... + ....+++. -++++|+.. ...+++||+.+++++
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATI--------GTKFCALNWKEQSAV 86 (297)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEE--------TTEEEEEETTTTEEE
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEE--------CCeEEEEECCCCcEE
Confidence 4677776532 3468999999886543321 1 11122222 256666652 246899999999887
Q ss_pred EcCCCCCC--CcceeEEE--ECCEEEEEccccCC----CCcccceEEEEECCCCceEecC-CCCCCCCCCCCCCcCCCCc
Q 013929 255 VLPSMKNP--RKMCSGVF--MDGKFYVIGGIGGS----DSKVLTCGEEYDLETETWTEIP-NMSPARGGAARGTEMPASA 325 (433)
Q Consensus 255 ~~~~~p~~--r~~~~~~~--~~g~lyv~GG~~~~----~~~~~~~v~~yd~~t~~W~~~~-~~p~~r~~~~~~~~~~~~~ 325 (433)
.+...+.. ......+. -+|++|+..-.... .......++.+|+. ++...+. .+..+
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~p-------------- 151 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDIS-------------- 151 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBE--------------
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccc--------------
Confidence 76543221 11111222 36787764311100 01123467888875 3333321 11111
Q ss_pred CCCCEEEEE-C-CEEEEEecCCCeEEEEeC--CCCcE
Q 013929 326 EAPPLVAVV-N-NELYAADYADMEVRKYDK--ERRLW 358 (433)
Q Consensus 326 ~~~~~~~~~-~-~~ly~~gg~~~~i~~yd~--~~~~W 358 (433)
..++.. + ..+|+.....+.|++||. .++..
T Consensus 152 ---ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 152 ---NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp ---EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred ---cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc
Confidence 123333 3 468888877788999975 55554
No 179
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.35 E-value=2.2 Score=36.56 Aligned_cols=153 Identities=11% Similarity=0.023 Sum_probs=79.5
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCCcee--cC----CCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCc
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWS--SG----MRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSS 242 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~--~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 242 (433)
+++...+.+|+|-|. .+|+++.....+. .+ +.+|.. .. ++... +++||+|-| +.
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG--------~~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRG--------RK 89 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEET--------TE
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEcc--------CE
Confidence 455679999999765 4777776543321 11 234422 12 22222 689999955 34
Q ss_pred eEEEeCCCCC--e-EEcCC--CCCCCcceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCC-
Q 013929 243 AEMYNSETQT--W-KVLPS--MKNPRKMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARG- 313 (433)
Q Consensus 243 ~~~yd~~t~~--W-~~~~~--~p~~r~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~- 313 (433)
+|+|+..+-. + +.+.. +|..-..-.+|+. +|++|+|-|. ..++||..+++=. +.-|....
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~---------~ywr~d~~~~~~d--~gyPr~i~~ 158 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN---------QVWRYDDTNHIMD--KDYPRLIEE 158 (207)
T ss_dssp EEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT---------EEEEEETTTTEEC--SSCCCBHHH
T ss_pred EEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC---------EEEEEeCcCcccc--CCCCccHHH
Confidence 6667643211 1 22332 2221112233332 5899999663 3688998765321 11111100
Q ss_pred CCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 314 GAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
....+. ....++...++.+|++- .+..++||..+++-..
T Consensus 159 ~~~Gip------~~iDaAf~~~g~~YfFk--g~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 159 DFPGIG------DKVDAVYEKNGYIYFFN--GPIQFEYSIWSNRIVR 197 (207)
T ss_dssp HSTTSC------SCCSEEEEETTEEEEEE--TTEEEEEETTTTEEEE
T ss_pred cCCCCC------CCccEEEEcCCcEEEEE--CCEEEEEeCCccEEec
Confidence 000000 00124556799999994 4789999998876443
No 180
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.34 E-value=0.52 Score=45.04 Aligned_cols=137 Identities=12% Similarity=0.071 Sum_probs=74.2
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF 270 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~ 270 (433)
+.+++||..+++-..+-.+........++.+ ++..++.|+.++ .+.+||..+++-.. .+........+..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~--~~~~h~~~v~~~s 196 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLR--NMTSHSARVGSLS 196 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEE--EECCCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEE--EEeCCCCceEEEe
Confidence 3689999999876654333322222222222 567777777553 48889998875322 2222222334455
Q ss_pred ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEE
Q 013929 271 MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRK 350 (433)
Q Consensus 271 ~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~ 350 (433)
.++.+.+.|+.+ ..+..+|..+....... +....... .......++..++.++..+.+.+
T Consensus 197 ~~~~~l~sgs~d-------~~i~~~d~~~~~~~~~~-~~~h~~~~------------~~~~~~~~g~~l~s~~~D~~v~i 256 (420)
T 4gga_A 197 WNSYILSSGSRS-------GHIHHHDVRVAEHHVAT-LSGHSQEV------------CGLRWAPDGRHLASGGNDNLVNV 256 (420)
T ss_dssp EETTEEEEEETT-------SEEEEEETTSSSCEEEE-EECCSSCE------------EEEEECTTSSEEEEEETTSCEEE
T ss_pred eCCCEEEEEeCC-------CceeEeeecccceeeEE-ecccccce------------eeeeecCCCCeeeeeeccccceE
Confidence 677777777765 24567776654322111 10000010 00112225667777778888999
Q ss_pred EeCCCCc
Q 013929 351 YDKERRL 357 (433)
Q Consensus 351 yd~~~~~ 357 (433)
||..+++
T Consensus 257 ~~~~~~~ 263 (420)
T 4gga_A 257 WPSAPGE 263 (420)
T ss_dssp EESSCCS
T ss_pred Eeecccc
Confidence 9887653
No 181
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.27 E-value=3.4 Score=38.42 Aligned_cols=181 Identities=10% Similarity=0.020 Sum_probs=101.9
Q ss_pred EEEEe-eccceEEEEecCCCcEEeCCC--CCCccccccCCceEEE--ECCEEEEECCCCCCcccceeEEEEEcCCCceec
Q 013929 133 WVYFS-CHLLEWEAFDPIRRRWMHLPR--MTSNECFMCSDKESLA--VGTELLVFGRELTAHHISHVIYRYSILTNSWSS 207 (433)
Q Consensus 133 ~l~~~-~~~~~~~~yd~~~~~W~~l~~--~p~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 207 (433)
.||.. .....++++++....-..+.. +..| ..+++ .++.||+.-.. .+.++++++....-+.
T Consensus 86 ~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-------~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 86 LVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-------GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKV 152 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-------CEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEE
T ss_pred EEEEEeccCCceEEEecCCCCceEEEeCCCCCc-------cEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEE
Confidence 44443 234567888887655444321 1111 22333 36889988532 2468888887554332
Q ss_pred C--CCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccc
Q 013929 208 G--MRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGI 281 (433)
Q Consensus 208 ~--~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~ 281 (433)
+ ..+..| ..+++. ++.||+.--.. ...++++++....-+.+..-. .....+.++- +++||+.-.
T Consensus 153 l~~~~l~~P---~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~- 222 (349)
T 3v64_C 153 LLWQSLEKP---RAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDA- 222 (349)
T ss_dssp EECTTCSCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCCSS-CSCEEEEEEETTTTEEEEEET-
T ss_pred EEeCCCCCc---ceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECC-CCCcceEEEeCCCCEEEEEEC-
Confidence 2 122222 233443 78999984211 367999998765444442211 1122344443 789999832
Q ss_pred cCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 282 GGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 282 ~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
....|+++|+....-+.+..... ..+.++++.++.||+.....+.|.++|..+++
T Consensus 223 ------~~~~I~~~~~dG~~~~~~~~~~~---------------~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 223 ------KHHVIERANLDGSHRKAVISQGL---------------PHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp ------TTTEEEEEETTSCSCEEEECSSC---------------SSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ------CCCEEEEEeCCCCceEEEEeCCC---------------CCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 23578999987533222211110 12236777899999999888999999966554
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.23 E-value=5.6 Score=40.73 Aligned_cols=174 Identities=11% Similarity=0.002 Sum_probs=90.7
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCC-------CcCCceEEEeCCCCCe--EEcCCCCCC-
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEG-------NILSSAEMYNSETQTW--KVLPSMKNP- 262 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~yd~~t~~W--~~~~~~p~~- 262 (433)
..++++|..+++......++........-+-+++.++++..+... .....+++++..+..- +.+...+..
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred EEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 469999999998752112222221122222356655555543321 1245689999887652 233222222
Q ss_pred CcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEE
Q 013929 263 RKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAA 341 (433)
Q Consensus 263 r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 341 (433)
....... .-+|+..++....+. ....++.+|..+..|+.+..-..... ..+..+|.+|+.
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~---~~~~l~~~~~~~~~~~~l~~~~~~~~----------------~~~~~~g~l~~~ 287 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGW---SENDVYWKRPGEKDFRLLVKGVGAKY----------------EVHAWKDRFYVL 287 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETT---TEEEEEEECTTCSSCEEEEECSSCCE----------------EEEEETTEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEeCCC---CceEEEEEcCCCCceEEeecCCCceE----------------EEEecCCcEEEE
Confidence 2222222 235665555443311 24567778877777877753221111 233356776665
Q ss_pred ec---CCCeEEEEeCCCCc---EEEeccCC-CcccCCCcccEEEEEeCCEEEEEcCC
Q 013929 342 DY---ADMEVRKYDKERRL---WFTIGRLP-ERANSMNGWGLAFRACGDRLIVIGGP 391 (433)
Q Consensus 342 gg---~~~~i~~yd~~~~~---W~~v~~lp-~~~~~~~~~~~~~~~~~~~l~v~GG~ 391 (433)
.. ....|+.+|..+.. |+.+..-. .... ..+...+++|++....
T Consensus 288 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l------~~~~~~~~~lv~~~~~ 338 (695)
T 2bkl_A 288 TDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL------LSVSIVGGHLSLEYLK 338 (695)
T ss_dssp ECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE------EEEEEETTEEEEEEEE
T ss_pred ECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE------EEEEEECCEEEEEEEE
Confidence 43 34789999997764 88775321 1110 2233447888777644
No 183
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.21 E-value=2.1 Score=38.76 Aligned_cols=193 Identities=8% Similarity=0.073 Sum_probs=96.0
Q ss_pred EEEEeeccceEEEEecC-CCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCc--eecC
Q 013929 133 WVYFSCHLLEWEAFDPI-RRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNS--WSSG 208 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~-~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 208 (433)
.+|+.+....+++||+. ...|..-...+.. ...+.. ++.||+... ...++.||+. ++ |+..
T Consensus 109 ~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~-------~~~~~~~~g~l~vgt~-------~~~l~~~d~~-g~~~~~~~ 173 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTDGTEKWRFKTKKAIY-------ATPIVSEDGTIYVGSN-------DNYLYAINPD-GTEKWRFK 173 (330)
T ss_dssp EEEEECTTSEEEEECTTSCEEEEEECSSCCC-------SCCEECTTSCEEEECT-------TSEEEEECTT-SCEEEEEE
T ss_pred EEEEEecCCEEEEEcCCCCEEEEEcCCCcee-------eeeEEcCCCEEEEEcC-------CCEEEEECCC-CCEeEEEe
Confidence 45555555678889987 4456544322111 112333 567777432 2358899988 43 5432
Q ss_pred CCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCC-CCeEEcCCCCCCCcceeEEEE-CCEEEEEccccCCC
Q 013929 209 MRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSET-QTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGIGGSD 285 (433)
Q Consensus 209 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~~~ 285 (433)
.+ ... ..+.+. .++.||+.. ..++.||... ..|+...... . ..+.+.. +|.||+... +
T Consensus 174 ~~--~~~-~~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~-~--- 234 (330)
T 3hxj_A 174 TN--DAI-TSAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSL-D--- 234 (330)
T ss_dssp CS--SCC-CSCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEET-T---
T ss_pred cC--CCc-eeeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcC-C---
Confidence 21 111 122333 367787753 4588888432 2466543211 1 1222222 457777531 1
Q ss_pred CcccceEEEEECCCCc-eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCC-cEEEec
Q 013929 286 SKVLTCGEEYDLETET-WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERR-LWFTIG 362 (433)
Q Consensus 286 ~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~-~W~~v~ 362 (433)
..+.+||+.... |+.... ..... ..+.. ++.||+. ...+.+.+||+..+ .|..-
T Consensus 235 ----~gl~~~~~~g~~~~~~~~~--~~~~~---------------~~~~~~~g~l~v~-t~~ggl~~~d~~g~~~~~~~- 291 (330)
T 3hxj_A 235 ----GHLYAINPDGTEKWRFKTG--KRIES---------------SPVIGNTDTIYFG-SYDGHLYAINPDGTEKWNFE- 291 (330)
T ss_dssp ----TEEEEECTTSCEEEEEECS--SCCCS---------------CCEECTTSCEEEE-CTTCEEEEECTTSCEEEEEE-
T ss_pred ----CeEEEECCCCCEeEEeeCC--CCccc---------------cceEcCCCeEEEe-cCCCCEEEECCCCcEEEEEE-
Confidence 236777765443 543221 11111 23333 6777765 34558999997533 35532
Q ss_pred cCCCcccCCCcccEEEEE-eCCEEEEEc
Q 013929 363 RLPERANSMNGWGLAFRA-CGDRLIVIG 389 (433)
Q Consensus 363 ~lp~~~~~~~~~~~~~~~-~~~~l~v~G 389 (433)
++.... .+++. .+++||+.+
T Consensus 292 -~~~~~~------~~~~~d~~g~l~~gt 312 (330)
T 3hxj_A 292 -TGSWII------ATPVIDENGTIYFGT 312 (330)
T ss_dssp -CSSCCC------SCCEECTTCCEEEEC
T ss_pred -cCCccc------cceEEcCCCEEEEEc
Confidence 332211 22333 678888744
No 184
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.05 E-value=0.61 Score=48.27 Aligned_cols=202 Identities=13% Similarity=0.037 Sum_probs=104.1
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCC----Cceec-CC-CC
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILT----NSWSS-GM-RM 211 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t----~~W~~-~~-~~ 211 (433)
...+..+++.......+...... ..+++.. ++.||+.--. .+.++++++.+ ..-.. +. .+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~------p~gla~d~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~i~~~~ 452 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRN------VVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDI 452 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTT------CCCCEEETTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCBCCSCC
T ss_pred ccceEEEeCCCCcceeeeccCcc------eEEEccccccCeEEEEecC------CCeEEEEecCCCCCCcceEEEEeCCC
Confidence 35677788877776655322111 1122332 5788887422 23578888875 11111 11 12
Q ss_pred CCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCC--CCCCCcceeEEE--ECCEEEEEccccCCC
Q 013929 212 NAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPS--MKNPRKMCSGVF--MDGKFYVIGGIGGSD 285 (433)
Q Consensus 212 p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~~--~~g~lyv~GG~~~~~ 285 (433)
..| ..+++ .+++||+.- .....++++++....-+.+.. +..| .++++ .++.||+.--.
T Consensus 453 ~~P---~glavD~~~g~LY~tD------~~~~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~---- 516 (699)
T 1n7d_A 453 QAP---DGLAVDWIHSNIYWTD------SVLGTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWG---- 516 (699)
T ss_dssp --C---CCEECCCSSSBCEECC------TTTSCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCS----
T ss_pred CCc---ceEEEEeeCCcEEEEe------ccCCeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccC----
Confidence 111 23333 467899872 224568999988765444432 2222 23333 36788876311
Q ss_pred CcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEecc
Q 013929 286 SKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 286 ~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~~ 363 (433)
....|+++++....-+.+..... .++.++++- +++||+.....+.|+++|+....-+.+..
T Consensus 517 --~~~~I~~~~~dG~~~~~l~~~~l---------------~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~ 579 (699)
T 1n7d_A 517 --TPAKIKKGGLNGVDIYSLVTENI---------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 579 (699)
T ss_dssp --SSCCEEBCCSSSCCCCEESCSSC---------------SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC
T ss_pred --CCCeEEEEeCCCCCeeEEEeCCC---------------CCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe
Confidence 12457777765433222211000 011235543 68999998878899999997654444432
Q ss_pred CCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 364 LPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 364 lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
.+.... +..+++..+++||+.-.
T Consensus 580 ~~~~~~----~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 580 DEKRLA----HPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp CSSSCS----SCCCCEEETTEEEEECS
T ss_pred cCCcCC----CceEeEEECCEEEEEeC
Confidence 211111 11334456788998863
No 185
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.03 E-value=1.2 Score=40.70 Aligned_cols=158 Identities=13% Similarity=0.048 Sum_probs=76.8
Q ss_pred ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CC-EEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GE-IAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
.++.+|+.++. .+.++++|+.+++....-..+.....+.++.. ++ .+|+.+.. ...+++||+.+++
T Consensus 9 ~~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 9 AGHEYMIVTNY------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK 76 (349)
T ss_dssp TTCEEEEEEET------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE
T ss_pred CCCEEEEEeCC------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc
Confidence 36778887754 34689999998875432222220012233332 34 67777532 2568999999876
Q ss_pred eEEcCCCCC-----CCcceeEEEE-CCE-EEEEcccc-CCCC---cccceEEEEECCCCceEec-CCCCCCCCCCCCCCc
Q 013929 253 WKVLPSMKN-----PRKMCSGVFM-DGK-FYVIGGIG-GSDS---KVLTCGEEYDLETETWTEI-PNMSPARGGAARGTE 320 (433)
Q Consensus 253 W~~~~~~p~-----~r~~~~~~~~-~g~-lyv~GG~~-~~~~---~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~ 320 (433)
-...-..+. .......+.. +|+ +|+.+... .... .....+.+||+.+++-... .....+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~----- 151 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVY----- 151 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCC-----
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCccc-----
Confidence 533211111 0111223332 454 55543210 0000 0124688999887432111 1111111111
Q ss_pred CCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 321 MPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
.....-++++|+.+ .++.+||+.+++-..
T Consensus 152 --------~~~~s~dg~l~~~~---~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 152 --------LMRAADDGSLYVAG---PDIYKMDVKTGKYTV 180 (349)
T ss_dssp --------CEEECTTSCEEEES---SSEEEECTTTCCEEE
T ss_pred --------ceeECCCCcEEEcc---CcEEEEeCCCCceec
Confidence 01223366777753 349999998876543
No 186
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.00 E-value=3.5 Score=37.54 Aligned_cols=63 Identities=10% Similarity=-0.019 Sum_probs=35.5
Q ss_pred CEEEEEecCCCeEEEEeCCCCcEE--EeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeec
Q 013929 336 NELYAADYADMEVRKYDKERRLWF--TIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVP 406 (433)
Q Consensus 336 ~~ly~~gg~~~~i~~yd~~~~~W~--~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~ 406 (433)
+.+++.|+..+.|.+||..+++-. .+..+..... ...-..++. .++++++.|+.++ .+.+|++
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~ 364 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC--GAAIRQTSFSRDSSILIAVCDDA------SIWRWDR 364 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTC--CSCEEEEEECTTSSEEEEEETTS------EEEEEEC
T ss_pred CcEEEEEecCCcEEEEECCCCCCccccceEEccccc--CCceEEEEeCCCCCeEEEEeCCC------EEEEEEe
Confidence 778888888899999999876411 1112222110 000122332 3667777777532 4677776
No 187
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.97 E-value=4.5 Score=38.59 Aligned_cols=195 Identities=13% Similarity=0.055 Sum_probs=99.6
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCce-ecCCCCC--CCcc
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSW-SSGMRMN--APRC 216 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~p--~~r~ 216 (433)
..+..+|+.++.-..+...... .+..+. .++.||+.... ....++++|+.++.- ..+..++ ....
T Consensus 152 ~~I~~id~~~g~~~~~~~~~~~------~~ia~~~~g~~l~~~d~~-----~~~~I~~~d~~~~~~~~~~g~~~~~~~~~ 220 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGFKG------GKPAVTKDKQRVYSIGWE-----GTHTVYVYMKASGWAPTRIGQLGSTFSGK 220 (409)
T ss_dssp TEEEEEETTTTEEEEEEETCCB------CBCEECTTSSEEEEEBSS-----TTCEEEEEEGGGTTCEEEEEECCTTSCSC
T ss_pred CcEEEEECCCCEEEEeeccCCC------CceeEecCCCcEEEEecC-----CCceEEEEEcCCCceeEEeeeccchhcCC
Confidence 5688899887665544322111 110111 13467776532 111689999876532 2331111 1122
Q ss_pred eeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC---CCCCCCcc-e-eEEEE--CCEEEEEccccCCCCc
Q 013929 217 LFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP---SMKNPRKM-C-SGVFM--DGKFYVIGGIGGSDSK 287 (433)
Q Consensus 217 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~---~~p~~r~~-~-~~~~~--~g~lyv~GG~~~~~~~ 287 (433)
.+.+++. ++.||+... ...+++||+.+..-..+. ........ + ..++. ++.||+.-..
T Consensus 221 p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------ 287 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------ 287 (409)
T ss_dssp CCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------
T ss_pred cEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------
Confidence 2334443 689999421 246999999987755441 11112222 2 45554 5899998432
Q ss_pred ccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CCEEEEEec-CCCeEEEEeCCCCcEEEec
Q 013929 288 VLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-NNELYAADY-ADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 288 ~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg-~~~~i~~yd~~~~~W~~v~ 362 (433)
.+.|++||+... ...+..... ..+..-+....+.-..+.++++. +|.||+... ....|.++|+.++.-..+.
T Consensus 288 -~~~I~~~~~~g~-~~~~~g~~~-~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 288 -LSSVYKITPDGE-CEWFCGSAT-QKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp -TTEEEEECTTCC-EEEEEECTT-CCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEecCCC-EEEEEeCCC-CCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 346888988654 222211110 00000000000000111234433 578999987 8899999997777766654
No 188
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.96 E-value=1.2 Score=42.06 Aligned_cols=147 Identities=17% Similarity=0.177 Sum_probs=75.6
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcc-eeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKM-CSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
+++.++.|+.+ ..+.+||..+.+-... +...... .+++. -++..++.|+.+ ..+.+||+.+++
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-------~~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD-------RTVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-------CcEEEEECCCCe
Confidence 56667777654 3588899887754321 1111111 12222 256666666655 357889998876
Q ss_pred eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEeccCC-CcccCCCcccEEE
Q 013929 302 WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIGRLP-ERANSMNGWGLAF 378 (433)
Q Consensus 302 W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp-~~~~~~~~~~~~~ 378 (433)
....-.... .. ..++.. ++.+++.|+..+.|..||..++.-...-..+ .....+...-.++
T Consensus 199 ~~~~~~~~~---~v-------------~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 199 CSLTLSIED---GV-------------TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp EEEEEECSS---CE-------------EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred eEEEEEcCC---Cc-------------EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 433211111 10 022222 6788888888899999999887643321111 1001111111223
Q ss_pred EE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 379 RA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 379 ~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+. .++++++.|+.+. .+.+|++.
T Consensus 263 ~~~~~g~~l~s~s~d~------~v~~wd~~ 286 (393)
T 1erj_A 263 VFTRDGQSVVSGSLDR------SVKLWNLQ 286 (393)
T ss_dssp EECTTSSEEEEEETTS------EEEEEEC-
T ss_pred EECCCCCEEEEEeCCC------EEEEEECC
Confidence 32 3566777776532 36677664
No 189
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.95 E-value=0.68 Score=42.00 Aligned_cols=146 Identities=8% Similarity=0.065 Sum_probs=71.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC-CCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN-APRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
++.+++.|+. ...+.+||..++.= ....+. ....-.+++.. ++.+++.|+.+ ..+.+||..+..
T Consensus 108 ~~~~l~sgs~------D~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~ 174 (304)
T 2ynn_A 108 TKPYVLSGSD------DLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQST 174 (304)
T ss_dssp SSSEEEEEET------TSCEEEEEGGGTTE-EEEEECCCCSCEEEEEECTTCTTEEEEEETT------SEEEEEETTCSS
T ss_pred CCCEEEEECC------CCeEEEEECCCCcc-hhhhhcccCCcEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCC
Confidence 3455556654 23578888766521 111111 11111222222 34667777755 347788876543
Q ss_pred --eEEcCCCCCCCcceeEEEE----CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 253 --WKVLPSMKNPRKMCSGVFM----DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 253 --W~~~~~~p~~r~~~~~~~~----~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
...... ..+ ....+.+ ++.+++.|+.+ ..+.+||+.+.+-.. .+.......
T Consensus 175 ~~~~~~~~--~~~-~v~~~~~~~~~~~~~l~s~s~D-------~~i~iWd~~~~~~~~--~~~~h~~~v----------- 231 (304)
T 2ynn_A 175 PNFTLTTG--QER-GVNYVDYYPLPDKPYMITASDD-------LTIKIWDYQTKSCVA--TLEGHMSNV----------- 231 (304)
T ss_dssp CSEEEECC--CTT-CEEEEEECCSTTCCEEEEEETT-------SEEEEEETTTTEEEE--EEECCSSCE-----------
T ss_pred ccceeccC--CcC-cEEEEEEEEcCCCCEEEEEcCC-------CeEEEEeCCCCccce--eeCCCCCCE-----------
Confidence 111110 001 1111211 45566666655 357889988764221 111111110
Q ss_pred CCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 327 APPLVAV-VNNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 327 ~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
..++. -++.+++.|+..+.|.+||..+.+-.
T Consensus 232 --~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 232 --SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp --EEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred --EEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 01222 25667778888899999999886643
No 190
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.93 E-value=0.49 Score=49.34 Aligned_cols=182 Identities=8% Similarity=0.049 Sum_probs=89.2
Q ss_pred EEEeeccceEEEEecCCCcEEeC-CCCCCccccccCCceEEE--ECCEEEEECCCCCCcccceeEEEEEcCCC-ceecCC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHL-PRMTSNECFMCSDKESLA--VGTELLVFGRELTAHHISHVIYRYSILTN-SWSSGM 209 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l-~~~p~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~ 209 (433)
|.+......+..||..+.+.... ...... -..+. .++..++.|+. ...+.+||..++ .....-
T Consensus 70 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDY-------IRSIAVHPTKPYVLSGSD------DLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSC-------EEEEEECSSSSEEEEEET------TSEEEEEEGGGTSEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEecCCCC-------EEEEEEeCCCCEEEEEcC------CCEEEEEECCCCceEEEEE
Confidence 33333445677888877665332 111111 01111 13444445543 235888998776 222111
Q ss_pred CCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe--EEcCCCCCCCcceeEEEE---CCEEEEEcccc
Q 013929 210 RMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW--KVLPSMKNPRKMCSGVFM---DGKFYVIGGIG 282 (433)
Q Consensus 210 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~~~p~~r~~~~~~~~---~g~lyv~GG~~ 282 (433)
. .....-.+++.. ++.+++.|+.+ ..+.+||..+..- ..... ........... ++..++.|+.+
T Consensus 137 ~-~~~~~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 137 E-GHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp E-CCSSCEEEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTT
T ss_pred c-CCCCcEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCC
Confidence 1 011111222332 45677777654 3588888866532 21111 11111222222 67777777655
Q ss_pred CCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 283 GSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 283 ~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
..+..||..++.-... +....... ..++ .-++.+++.|+..+.|..||..+.+-.
T Consensus 208 -------g~i~~~d~~~~~~~~~--~~~~~~~v-------------~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 208 -------LTIKIWDYQTKSCVAT--LEGHMSNV-------------SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp -------SEEEEEETTTTEEEEE--EECCSSCE-------------EEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred -------CEEEEEECCCCcEEEE--EcCCCCCE-------------EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 2578899877653221 11010110 0122 225667777888889999999876543
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.90 E-value=1 Score=40.41 Aligned_cols=150 Identities=13% Similarity=0.026 Sum_probs=80.6
Q ss_pred CEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 177 TELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 177 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
+.+|+.+.. ...+++||+.++ .+.+.. +.. ...+++. -++++|+... ....+.+||+.+++.+.
T Consensus 40 ~~l~~~~~~------~~~i~~~~~~~~-~~~~~~-~~~-~~~~l~~~~dg~l~v~~~------~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 40 SAVIFSDVR------QNRTWAWSDDGQ-LSPEMH-PSH-HQNGHCLNKQGHLIACSH------GLRRLERQREPGGEWES 104 (296)
T ss_dssp TEEEEEEGG------GTEEEEEETTSC-EEEEES-SCS-SEEEEEECTTCCEEEEET------TTTEEEEECSTTCCEEE
T ss_pred CEEEEEeCC------CCEEEEEECCCC-eEEEEC-CCC-CcceeeECCCCcEEEEec------CCCeEEEEcCCCCcEEE
Confidence 347777632 336899999987 554432 111 1223333 2678887642 12568999998888776
Q ss_pred cCCCCCC----CcceeEEEECCEEEEE----cccc------CCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcC
Q 013929 256 LPSMKNP----RKMCSGVFMDGKFYVI----GGIG------GSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEM 321 (433)
Q Consensus 256 ~~~~p~~----r~~~~~~~~~g~lyv~----GG~~------~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~ 321 (433)
+...... +....++--+|++|+. |... .........++.||+. ++...+.... ..
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~---~~------- 173 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR---VK------- 173 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC---SS-------
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC---CC-------
Confidence 5322111 1112222336888886 4321 0001112468889887 5555442111 00
Q ss_pred CCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCC-CCcE
Q 013929 322 PASAEAPPLVAV-VNNELYAADYADMEVRKYDKE-RRLW 358 (433)
Q Consensus 322 ~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~-~~~W 358 (433)
+.+++. -++++++.+...+.|++||.. +++.
T Consensus 174 ------~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 174 ------PNGLAFLPSGNLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp ------EEEEEECTTSCEEEEETTTTEEEEEEECSSSCE
T ss_pred ------CccEEECCCCCEEEEeCCCCeEEEEEECCCCcC
Confidence 012333 256666666667899999986 5555
No 192
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.82 E-value=1.6 Score=43.61 Aligned_cols=195 Identities=9% Similarity=-0.015 Sum_probs=97.7
Q ss_pred cEEEEeeccceEEEEec--CCCcEE-eCCCCCCccccccCCceEEE-E----CC-EEEEECCCCCCcccceeEEEEEcCC
Q 013929 132 HWVYFSCHLLEWEAFDP--IRRRWM-HLPRMTSNECFMCSDKESLA-V----GT-ELLVFGRELTAHHISHVIYRYSILT 202 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~--~~~~W~-~l~~~p~~~~~~~~~~~~~~-~----~~-~iyv~GG~~~~~~~~~~~~~yd~~t 202 (433)
.+||+....+.+.+||+ .+.+-. .++.-..+ ..++. - ++ .+|+.. + ..+.+.++|..+
T Consensus 191 ~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p-------~~va~sp~~~~dg~~l~v~~-~-----~~~~v~v~D~~t 257 (543)
T 1nir_A 191 RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA-------RSVESSKFKGYEDRYTIAGA-Y-----WPPQFAIMDGET 257 (543)
T ss_dssp CEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE-------EEEEECCSTTCTTTEEEEEE-E-----ESSEEEEEETTT
T ss_pred CEEEEECCCCeEEEEECcCCCCcEEEEEecCCCc-------ceEEeCCCcCCCCCEEEEEE-c-----cCCeEEEEeccc
Confidence 35666665678889998 554321 22211111 11222 2 34 455543 2 234688899887
Q ss_pred Ccee-cCCC--C--------CCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE
Q 013929 203 NSWS-SGMR--M--------NAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF 270 (433)
Q Consensus 203 ~~W~-~~~~--~--------p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~ 270 (433)
.+-. .++. + |.+|........ +..+|+... ....++++|..+..-..+..++..+.-+..+.
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~------~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~ 331 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK------ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGW 331 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEECTTSSSCEEEEEECCSSCCCEEE
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC------CCCeEEEEEecCCCcceeEEeccCcCccCceE
Confidence 7542 2221 1 122322222222 445555532 13568888887643211111122333333333
Q ss_pred -ECCE-EEEEccccCCCCcccceEEEEECCCCceEec---CCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEec
Q 013929 271 -MDGK-FYVIGGIGGSDSKVLTCGEEYDLETETWTEI---PNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADY 343 (433)
Q Consensus 271 -~~g~-lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~---~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg 343 (433)
-+|+ +|+.+.. .+.+.++|+.+++-... ...|.+..+ ..... ++.+|+.+.
T Consensus 332 spdg~~l~va~~~-------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g---------------~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 332 DSSHRYFMTAANN-------SNKVAVIDSKDRRLSALVDVGKTPHPGRG---------------ANFVHPKYGPVWSTSH 389 (543)
T ss_dssp CTTSCEEEEEEGG-------GTEEEEEETTTTEEEEEEECSSSBCCTTC---------------EEEEETTTEEEEEEEB
T ss_pred CCCCCEEEEEecC-------CCeEEEEECCCCeEEEeeccCCCCCCCCC---------------cccCCCCCccEEEecc
Confidence 2555 4444322 24578899998864432 122333222 12233 378888775
Q ss_pred -CCCeEEEEeCCCC-----cEEEeccCCCc
Q 013929 344 -ADMEVRKYDKERR-----LWFTIGRLPER 367 (433)
Q Consensus 344 -~~~~i~~yd~~~~-----~W~~v~~lp~~ 367 (433)
..+.|-+||..+. .|+.+..++..
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 4578999998773 38877766543
No 193
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.60 E-value=0.32 Score=46.88 Aligned_cols=144 Identities=12% Similarity=0.090 Sum_probs=75.1
Q ss_pred EEEEECCCCCCcccceeEEEEEcCCCceecCCCC-CCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 178 ELLVFGRELTAHHISHVIYRYSILTNSWSSGMRM-NAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 178 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
.+++.|+. ...+.+||..+++-..+-.+ .....-.+++.. ++.+++.|+.++ .+.++|..++..+
T Consensus 133 ~~lasGs~------dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~~~~~~ 200 (435)
T 4e54_B 133 STVAVGSK------GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFKGNILR 200 (435)
T ss_dssp TCEEEEET------TSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETTSCEEE
T ss_pred CEEEEEeC------CCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeeccCCcee
Confidence 45555553 23478888877654332221 111122233332 455666676553 4788898887655
Q ss_pred EcCCCCCCC-cceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 255 VLPSMKNPR-KMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 255 ~~~~~p~~r-~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
.+....... ...++.. -++++++.|+.++ .+..||+.... +..+....... ..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-------~i~~wd~~~~~---~~~~~~h~~~v--------------~~v 256 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG-------NVILLNMDGKE---LWNLRMHKKKV--------------THV 256 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS-------BEEEEESSSCB---CCCSBCCSSCE--------------EEE
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC-------cEeeeccCcce---eEEEecccceE--------------Eee
Confidence 443222111 1122332 3677778877652 46788886543 21111111110 122
Q ss_pred EE---CCEEEEEecCCCeEEEEeCCCCc
Q 013929 333 VV---NNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 333 ~~---~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.+ +..+++.|+..+.|.+||..+..
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred eecCCCceEEEEecCcceeeEEeccccc
Confidence 22 23467778788899999987654
No 194
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.52 E-value=1.6 Score=39.62 Aligned_cols=148 Identities=14% Similarity=0.070 Sum_probs=70.9
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
++..++.|+. ...+.+++.........................+..++.|+.++ .+.++|.....-..
T Consensus 97 dg~~l~s~~~------d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~------~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 97 DGQFALSGSW------DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK------TIKLWNTLGVCKYT 164 (340)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS------CEEEECTTSCEEEE
T ss_pred CCCEEEEEcc------cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC------eEEEEEeCCCceEE
Confidence 4555555554 23467777776654332222222111222222445555665442 35667766543222
Q ss_pred cCCCCCCCcceeEEEE----CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 256 LPSMKNPRKMCSGVFM----DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 256 ~~~~p~~r~~~~~~~~----~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
..... .......+.+ .+.+++.|+.+ ..+.+||+.+.+-...-... .... .++
T Consensus 165 ~~~~~-~~~~v~~~~~~~~~~~~~~~s~~~d-------~~i~i~d~~~~~~~~~~~~h--~~~v-------------~~~ 221 (340)
T 4aow_A 165 VQDES-HSEWVSCVRFSPNSSNPIIVSCGWD-------KLVKVWNLANCKLKTNHIGH--TGYL-------------NTV 221 (340)
T ss_dssp ECSSS-CSSCEEEEEECSCSSSCEEEEEETT-------SCEEEEETTTTEEEEEECCC--SSCE-------------EEE
T ss_pred EEecc-ccCcccceEEccCCCCcEEEEEcCC-------CEEEEEECCCCceeeEecCC--CCcE-------------EEE
Confidence 21111 1111112221 23455566554 23678898877543321110 0010 012
Q ss_pred EE-ECCEEEEEecCCCeEEEEeCCCCcE
Q 013929 332 AV-VNNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 332 ~~-~~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
+. -++.+++.|+..+.|.+||..+..-
T Consensus 222 ~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 222 TVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp EECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 22 2577888888889999999987653
No 195
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.50 E-value=4.9 Score=37.51 Aligned_cols=229 Identities=9% Similarity=0.088 Sum_probs=107.4
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMN 212 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p 212 (433)
+|........+..+|..+..-...-....... .......++..++.||.. ..+.+||..+..-.. ..++
T Consensus 80 ~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v----~~~~~s~~g~~las~~~d------~~v~iw~~~~~~~~~-~~~~ 148 (380)
T 3iz6_a 80 WIVSASQDGRLIVWNALTSQKTHAIKLHCPWV----MECAFAPNGQSVACGGLD------SACSIFNLSSQADRD-GNMP 148 (380)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECCCTTC----CCCEECTTSSEEEECCSS------SCCEEEECCCCSSCC-CSST
T ss_pred EEEEEeCCCeEEEEECCCCccceEEecCCCCE----EEEEECCCCCEEEEeeCC------CcEEEEECCCCcccc-CCcc
Confidence 44444455567788877654322111111000 011122356667777652 246777776543211 0111
Q ss_pred CC--ccee-----eEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC--CCCCCCcc-eeEEEE---CCEEEE
Q 013929 213 AP--RCLF-----GSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP--SMKNPRKM-CSGVFM---DGKFYV 277 (433)
Q Consensus 213 ~~--r~~~-----~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~-~~~~~~---~g~lyv 277 (433)
.. ..+| .+... ++..++.|+.+ ..+.+||..++.-...- ..+..... ...+.+ ++.+++
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 10 0111 11111 23344555543 35788998887643321 22222111 112222 677888
Q ss_pred EccccCCCCcccceEEEEECCCC--ceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCC
Q 013929 278 IGGIGGSDSKVLTCGEEYDLETE--TWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKE 354 (433)
Q Consensus 278 ~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~ 354 (433)
.|+.++ .+..||+... .-..+....... .+++. -++..++.|+..+.|..||..
T Consensus 223 sgs~D~-------~v~~wd~~~~~~~~~~~~~h~~~v----------------~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 223 SGSCDT-------TVRLWDLRITSRAVRTYHGHEGDI----------------NSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp EEETTS-------CEEEEETTTTCCCCEEECCCSSCC----------------CEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred EEECCC-------eEEEEECCCCCcceEEECCcCCCe----------------EEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 888763 4678888632 112221110000 12332 267778888888999999999
Q ss_pred CCcEEEeccCCCcc-cCCCc-ccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 355 RRLWFTIGRLPERA-NSMNG-WGLAFRACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 355 ~~~W~~v~~lp~~~-~~~~~-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
++.-...-...... ..... ........++++++.|+.+. .+.+|+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~ 328 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTL 328 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETT
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC------CEEEEECC
Confidence 87644332111111 00000 11222234677777776532 36677763
No 196
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.24 E-value=1.3 Score=41.27 Aligned_cols=149 Identities=6% Similarity=0.032 Sum_probs=73.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe----CCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL----GEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++.+++.|+. ...+.+||..+++-...-..+... ..+... ++.+++.|+.+ ..+.+||..+.
T Consensus 111 ~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~ 176 (408)
T 4a11_B 111 DTGMFTSSSF------DKTLKVWDTNTLQTADVFNFEETV--YSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSG 176 (408)
T ss_dssp CTTCEEEEET------TSEEEEEETTTTEEEEEEECSSCE--EEEEECSSCSSCCEEEEEESS------SSEEEEESSSS
T ss_pred CCcEEEEEeC------CCeEEEeeCCCCccceeccCCCce--eeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCc
Confidence 3445555543 335888998887654332222221 122221 33466666544 35888998876
Q ss_pred CeEEcCCCCCCCcceeEE-EE-CCE-EEEEccccCCCCcccceEEEEECCCCc--eEecCCC--------CCCCCCCCCC
Q 013929 252 TWKVLPSMKNPRKMCSGV-FM-DGK-FYVIGGIGGSDSKVLTCGEEYDLETET--WTEIPNM--------SPARGGAARG 318 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~~~~-~~-~g~-lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~--------p~~r~~~~~~ 318 (433)
.-.. .+.........+ .. ++. +++.|+.++ .+.+||+.+.. ...+... ......+.
T Consensus 177 ~~~~--~~~~~~~~v~~~~~~~~~~~ll~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 245 (408)
T 4a11_B 177 SCSH--ILQGHRQEILAVSWSPRYDYILATASADS-------RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN-- 245 (408)
T ss_dssp CCCE--EECCCCSCEEEEEECSSCTTEEEEEETTS-------CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS--
T ss_pred ceee--eecCCCCcEEEEEECCCCCcEEEEEcCCC-------cEEEEECCCCCcccccccccccccceeecccccccc--
Confidence 4211 111111112222 22 333 677777653 36788887653 2222110 00001110
Q ss_pred CcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCc
Q 013929 319 TEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 319 ~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
..-..+.. ++..++.++..+.+.+||..+++
T Consensus 246 --------~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 246 --------GKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp --------SCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred --------CceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 00012222 56677778888899999998765
No 197
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.22 E-value=0.63 Score=44.73 Aligned_cols=107 Identities=6% Similarity=-0.004 Sum_probs=59.8
Q ss_pred CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCC-cceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 225 EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPR-KMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 225 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r-~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
+.+++.|+.++ .+.+||..+..-..+-...... .-.+++. .++.+++.|+.++ .+.+||++++.
T Consensus 132 ~~~lasGs~dg------~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-------~v~iwd~~~~~ 198 (435)
T 4e54_B 132 PSTVAVGSKGG------DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-------TTRLQDFKGNI 198 (435)
T ss_dssp TTCEEEEETTS------CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-------CEEEEETTSCE
T ss_pred CCEEEEEeCCC------EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-------EEEEeeccCCc
Confidence 34666676553 3778888766532222211111 1123333 2566777777663 36789998876
Q ss_pred eEecCCCCCCCCCCCCCCcCCCCcCCCCEE-EEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 302 WTEIPNMSPARGGAARGTEMPASAEAPPLV-AVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 302 W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~-~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
...+.......... .++ ..-++.+++.|+..+.|..||..++.
T Consensus 199 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 199 LRVFASSDTINIWF-------------CSLDVSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp EEEEECCSSCSCCC-------------CCEEEETTTTEEEEECSSSBEEEEESSSCB
T ss_pred eeEEeccCCCCccE-------------EEEEECCCCCEEEEEeCCCcEeeeccCcce
Confidence 65543221111110 123 23367788888888999999987653
No 198
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.19 E-value=2.8 Score=38.43 Aligned_cols=188 Identities=7% Similarity=-0.059 Sum_probs=91.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCcee-cC--CCCCCCcce--eeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWS-SG--MRMNAPRCL--FGSASLGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~--~~~p~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++.+++.||. ...+.+||..+++-. .+ ......... ...+..++.|.+.- ....+.+||..+
T Consensus 47 d~~~l~sg~~------Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~-------~~~~~~~~~~~~ 113 (343)
T 3lrv_A 47 DKWVCMCRCE------DGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLY-------PGNQITILDSKT 113 (343)
T ss_dssp EEEEEEEEEE------TTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEE-------TTTEEEEEETTT
T ss_pred CCCEEEEECC------CCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEE-------ccCceEEeecCC
Confidence 5566667764 235788888776531 11 110000000 12222344444441 123566777777
Q ss_pred CC-eEEcCCCCCCCcceeEEE-E--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 251 QT-WKVLPSMKNPRKMCSGVF-M--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 251 ~~-W~~~~~~p~~r~~~~~~~-~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
.. -+... ......-..++. - ++++++.|+.++ .+..||+.+++-..+.........
T Consensus 114 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg-------~i~~wd~~~~~~~~~~~~~~~~~i------------ 173 (343)
T 3lrv_A 114 NKVLREIE-VDSANEIIYMYGHNEVNTEYFIWADNRG-------TIGFQSYEDDSQYIVHSAKSDVEY------------ 173 (343)
T ss_dssp CCEEEEEE-CCCSSCEEEEECCC---CCEEEEEETTC-------CEEEEESSSSCEEEEECCCSSCCC------------
T ss_pred cceeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeCCC-------cEEEEECCCCcEEEEEecCCCCce------------
Confidence 65 22221 111111111221 1 566777777663 478899988765433211111111
Q ss_pred CCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEe
Q 013929 327 APPLVAV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSW 404 (433)
Q Consensus 327 ~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~ 404 (433)
.+++. -++.+++.|+..+.|.+||..+++-.. ..+... +.+.-.+++. .++..++.|+. + .+.+|
T Consensus 174 --~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~-~~~~~~---h~~~v~~l~fs~~g~~l~s~~~-~------~v~iw 240 (343)
T 3lrv_A 174 --SSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS-SRFPVD---EEAKIKEVKFADNGYWMVVECD-Q------TVVCF 240 (343)
T ss_dssp --CEEEECTTSCEEEEECTTSCEEEEESSCTTSCC-EECCCC---TTSCEEEEEECTTSSEEEEEES-S------BEEEE
T ss_pred --EEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc-cEEecc---CCCCEEEEEEeCCCCEEEEEeC-C------eEEEE
Confidence 12332 367888888889999999998875320 111110 1111133333 35666667662 2 47888
Q ss_pred ecCCC
Q 013929 405 VPSEG 409 (433)
Q Consensus 405 ~~~~~ 409 (433)
++...
T Consensus 241 d~~~~ 245 (343)
T 3lrv_A 241 DLRKD 245 (343)
T ss_dssp ETTSS
T ss_pred EcCCC
Confidence 88644
No 199
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.19 E-value=3.3 Score=37.69 Aligned_cols=224 Identities=12% Similarity=0.057 Sum_probs=101.1
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEE---EECCEEEEECCCCCCcccceeEEEEEcCCCceecCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESL---AVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGM 209 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~---~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 209 (433)
+|+.......+..||..+.+...+.....+. ..+. ..++.+++.|+. ...+.+||..+++-...
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~- 166 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQHDAPV------KTIHWIKAPNYSCVMTGSW------DKTLKFWDTRSSNPMMV- 166 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCE------EEEEEEECSSCEEEEEEET------TSEEEEECSSCSSCSEE-
T ss_pred EEEEEcCCCcEEEEEcCCCCceeeccccCce------EEEEEEeCCCCCEEEEccC------CCcEEEEECCCCcEEEE-
Confidence 4444445567888888877655432211111 1112 124566666654 23588999887653211
Q ss_pred CCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCCCCcceeEEEECC----EEEEEccccC
Q 013929 210 RMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKNPRKMCSGVFMDG----KFYVIGGIGG 283 (433)
Q Consensus 210 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~g----~lyv~GG~~~ 283 (433)
+.......+.......+++.++ ...+.+||..... +..+...............+. ..++.|+.+
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 237 (368)
T 3mmy_A 167 -LQLPERCYCADVIYPMAVVATA-------ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE- 237 (368)
T ss_dssp -EECSSCEEEEEEETTEEEEEEG-------GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-
T ss_pred -EecCCCceEEEecCCeeEEEeC-------CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC-
Confidence 1122223344444555555432 2457778877653 333332211111112222222 235666554
Q ss_pred CCCcccceEEEEECCCCce-EecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 284 SDSKVLTCGEEYDLETETW-TEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 284 ~~~~~~~~v~~yd~~t~~W-~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
..+.+||..+..- ..+..+....... ....... ....-..+.+ ++.+++.|+..+.|.+||..+++-..
T Consensus 238 ------g~i~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 238 ------GRVAIHYINPPNPAKDNFTFKCHRSNG-TNTSAPQ-DIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp ------SEEEEEESSCSCHHHHSEEEECSEEC-----CCCE-EECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred ------CcEEEEecCCCCccccceeeeeeeccc-ccccccc-cccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 2467788776521 0000000000000 0000000 0000012222 56777888888999999998765432
Q ss_pred eccCCCcccCCCcccEEEEE-eCCEEEEEcCCC
Q 013929 361 IGRLPERANSMNGWGLAFRA-CGDRLIVIGGPK 392 (433)
Q Consensus 361 v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~ 392 (433)
.+..... .-.+++. .++++++.|+.+
T Consensus 310 --~~~~~~~----~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 310 --TSEQLDQ----PISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp --ECCCCSS----CEEEEEECTTSSCEEEEECC
T ss_pred --EecCCCC----CceEEEECCCCCeEEEEecc
Confidence 2222111 1122332 356666666553
No 200
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.14 E-value=1.8 Score=39.59 Aligned_cols=149 Identities=12% Similarity=0.102 Sum_probs=78.5
Q ss_pred CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCce
Q 013929 225 EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETW 302 (433)
Q Consensus 225 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W 302 (433)
+.+++.|+.+ ..+.+||..+........+......-..+.+ +++.++.|+.+ ..+.+||+.+..-
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-------KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEE
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-------CcEEEEEcCCCCc
Confidence 4777777654 3478888876332221111111111122222 56666777655 2578899988875
Q ss_pred EecCCCCCCCCCCCCCCcCCCCcCCCCEEEE---ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEE
Q 013929 303 TEIPNMSPARGGAARGTEMPASAEAPPLVAV---VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFR 379 (433)
Q Consensus 303 ~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~---~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~ 379 (433)
..+........ .+.. .++.+++.++..+.|.+||..+++-...-..+.. ..++.
T Consensus 121 ~~~~~~~~~v~----------------~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~ 177 (368)
T 3mmy_A 121 IQIAQHDAPVK----------------TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER-------CYCAD 177 (368)
T ss_dssp EEEEECSSCEE----------------EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC-------EEEEE
T ss_pred eeeccccCceE----------------EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC-------ceEEE
Confidence 55322111111 2222 3678888888889999999987653222122221 13444
Q ss_pred EeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceEe
Q 013929 380 ACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNLL 416 (433)
Q Consensus 380 ~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~v 416 (433)
...+.+++.++. ..+.+|+.+.....+..+
T Consensus 178 ~~~~~~~~~~~~-------~~i~~~~~~~~~~~~~~~ 207 (368)
T 3mmy_A 178 VIYPMAVVATAE-------RGLIVYQLENQPSEFRRI 207 (368)
T ss_dssp EETTEEEEEEGG-------GCEEEEECSSSCEEEEEC
T ss_pred ecCCeeEEEeCC-------CcEEEEEeccccchhhhc
Confidence 455555554432 125667776544444444
No 201
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.05 E-value=2.2 Score=38.53 Aligned_cols=150 Identities=15% Similarity=0.192 Sum_probs=72.6
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEE-EECC-EEEEECCCCCCcccceeEEEEEcCCCceecCCC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESL-AVGT-ELLVFGRELTAHHISHVIYRYSILTNSWSSGMR 210 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 210 (433)
+++.......+..+|+.+.+-...-..+.... ....++ ..++ .+|+.+.. ...+++||+.+++-...-.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~ 73 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGP---TPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTT---CCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCC---CccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEE
Confidence 44444556678889998766543222222000 001112 2234 67777643 3468999998876532111
Q ss_pred CCCC----cceeeEEEe-C-CEEEEEccC---CCCCC--cCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCE-EEE
Q 013929 211 MNAP----RCLFGSASL-G-EIAILAGGS---DLEGN--ILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGK-FYV 277 (433)
Q Consensus 211 ~p~~----r~~~~~~~~-~-~~iyv~GG~---~~~~~--~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~-lyv 277 (433)
.+.+ .....++.. + .+||+.... ..... .-..+.+||+.+.+....-.. +......+. -+|+ +|+
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYG 151 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEE
Confidence 1110 011222322 3 477776421 00000 136799999988764332111 111222332 2454 555
Q ss_pred EccccCCCCcccceEEEEECCCCceE
Q 013929 278 IGGIGGSDSKVLTCGEEYDLETETWT 303 (433)
Q Consensus 278 ~GG~~~~~~~~~~~v~~yd~~t~~W~ 303 (433)
.. ..+.+||+.+++-.
T Consensus 152 ~~----------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 152 LG----------RDLHVMDPEAGTLV 167 (337)
T ss_dssp ES----------SSEEEEETTTTEEE
T ss_pred eC----------CeEEEEECCCCcEe
Confidence 51 24788999887643
No 202
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.00 E-value=1.3 Score=44.04 Aligned_cols=131 Identities=13% Similarity=0.164 Sum_probs=65.2
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCce
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETW 302 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W 302 (433)
+++.++.++.+ ..+.+||.....-..+..... .-.+++. -++++.+.|+.+ ..+.+||.....-
T Consensus 437 d~~~l~~~~~d------~~v~~w~~~~~~~~~~~~~~~--~v~~~~~spd~~~las~~~d-------~~i~iw~~~~~~~ 501 (577)
T 2ymu_A 437 DDQTIASASDD------KTVKLWNRNGQLLQTLTGHSS--SVRGVAFSPDGQTIASASDD-------KTVKLWNRNGQLL 501 (577)
T ss_dssp TSSEEEEEETT------SEEEEEETTSCEEEEEECCSS--CEEEEEECTTSCEEEEEETT-------SEEEEEETTSCEE
T ss_pred CCCEEEEEcCC------CEEEEEECCCCEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCC-------CEEEEEcCCCCEE
Confidence 55666666543 347778865543333322111 1112222 267777777655 2467788644332
Q ss_pred EecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEE-E
Q 013929 303 TEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFR-A 380 (433)
Q Consensus 303 ~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~-~ 380 (433)
..+....... .+++. -++++++.++..+.|.+||.....-..+..-.... .+++ .
T Consensus 502 ~~~~~h~~~v----------------~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v-------~~~~fs 558 (577)
T 2ymu_A 502 QTLTGHSSSV----------------RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV-------WGVAFS 558 (577)
T ss_dssp EEEECCSSCE----------------EEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCE-------EEEEEC
T ss_pred EEEeCCCCCE----------------EEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCE-------EEEEEc
Confidence 2222111000 01222 26777777888889999997554443332211111 2233 2
Q ss_pred eCCEEEEEcCCC
Q 013929 381 CGDRLIVIGGPK 392 (433)
Q Consensus 381 ~~~~l~v~GG~~ 392 (433)
.+++.++.||.+
T Consensus 559 ~dg~~l~s~~~D 570 (577)
T 2ymu_A 559 PDGQTIASASSD 570 (577)
T ss_dssp TTSSCEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 467777777763
No 203
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.99 E-value=0.086 Score=49.99 Aligned_cols=142 Identities=22% Similarity=0.167 Sum_probs=59.2
Q ss_pred EEECCEEEEECCCCCCcccceeEEEEEcCCCc--eecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 173 LAVGTELLVFGRELTAHHISHVIYRYSILTNS--WSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 173 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++.++.||+.+. ...++.+|..+++ |+.-.. . .....++.++.+|+.++.+ ..++.+|..+
T Consensus 6 ~v~~~~v~~gs~-------dg~v~a~d~~tG~~~W~~~~~--~--~~s~p~~~~g~~~v~~s~d------g~l~a~d~~t 68 (369)
T 2hz6_A 6 TLPETLLFVSTL-------DGSLHAVSKRTGSIKWTLKED--P--VLQVPTHVEEPAFLPDPND------GSLYTLGSKN 68 (369)
T ss_dssp --CTTEEEEEET-------TSEEEEEETTTCCEEEEEECC--C--SCCCC-----CCEEECTTT------CCEEEC----
T ss_pred eeeCCEEEEEcC-------CCEEEEEECCCCCEEEEecCC--C--ceecceEcCCCEEEEeCCC------CEEEEEECCC
Confidence 445777777643 2358999998875 764321 1 1122334567788876433 3488899876
Q ss_pred C--CeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCc
Q 013929 251 Q--TWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETET--WTEIPNMSPARGGAARGTEMPASA 325 (433)
Q Consensus 251 ~--~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~ 325 (433)
+ .|+.-...+... ..+.++ .++.+|+ |+.+ ..++.+|+.+++ |+.-... . .
T Consensus 69 G~~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~d-------g~v~a~D~~tG~~~w~~~~~~--~--~----------- 124 (369)
T 2hz6_A 69 NEGLTKLPFTIPELV-QASPCRSSDGILYM-GKKQ-------DIWYVIDLLTGEKQQTLSSAF--A--D----------- 124 (369)
T ss_dssp -CCSEECSCCHHHHH-TTCSCC-----CCC-CEEE-------EEEEEECCC-----------------------------
T ss_pred CceeeeeeccCcccc-ccCceEecCCEEEE-EeCC-------CEEEEEECCCCcEEEEecCCC--c--c-----------
Confidence 5 465322111000 111122 3555543 3322 357889988764 6542211 0 0
Q ss_pred CCCCEEEEECCEEEEEecCCCeEEEEeCCCCc--EEE
Q 013929 326 EAPPLVAVVNNELYAADYADMEVRKYDKERRL--WFT 360 (433)
Q Consensus 326 ~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~--W~~ 360 (433)
..+-.++.+|+ +...+.+..||+.+++ |+.
T Consensus 125 ----~~~p~~~~v~~-~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 125 ----SLSPSTSLLYL-GRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp ------------EEE-EEEEEEEECCCSSSSSCCCEE
T ss_pred ----cccccCCEEEE-EecCCEEEEEECCCCCEEEeE
Confidence 01114455554 4445679999988764 864
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.97 E-value=5 Score=38.20 Aligned_cols=148 Identities=12% Similarity=0.084 Sum_probs=83.3
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC-
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT- 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~- 252 (433)
++.||+.... .+.+.++|+.+++-..+.... ...+ .+.. ++.||+..... ...++++|+.+..
T Consensus 141 ~g~lyv~d~~------~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQRD------DPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEG-----THTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEETT------TTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSST-----TCEEEEEEGGGTTC
T ss_pred CCCEEEEecC------CCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCC-----CceEEEEEcCCCce
Confidence 5789988642 346899999987765443221 1112 2222 45677764311 1278999987653
Q ss_pred eEEcCCCC--CCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCC-CCCCCCCCCcCCCCcCC
Q 013929 253 WKVLPSMK--NPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSP-ARGGAARGTEMPASAEA 327 (433)
Q Consensus 253 W~~~~~~p--~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~r~~~~~~~~~~~~~~~ 327 (433)
...+...+ .....+++++. ++.||+... ...+++||+.+.....+..... ..... .
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--------~~~I~~~d~~~~~~~~~~~~~~~g~~~~-----------~ 267 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--------NKNFGRFNVKTQEVTLIKQLELSGSLGT-----------N 267 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT--------TCEEEEEETTTCCEEEEEECCCCSCCCC-----------S
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--------CCcEEEEECCCCCEEEEecccccCCCCC-----------C
Confidence 23331111 11222333333 688999421 2368999999887655421111 01110 0
Q ss_pred CC-EEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 013929 328 PP-LVAVV--NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 328 ~~-~~~~~--~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
+. .+++. ++.||+.....+.|++||+...
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 11 45555 5899999887889999998765
No 205
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.94 E-value=7.6 Score=39.01 Aligned_cols=115 Identities=10% Similarity=0.041 Sum_probs=68.1
Q ss_pred eEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCCC---C---cceeEEEECCEEEEEccccCCCCcccc
Q 013929 219 GSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKNP---R---KMCSGVFMDGKFYVIGGIGGSDSKVLT 290 (433)
Q Consensus 219 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~---r---~~~~~~~~~g~lyv~GG~~~~~~~~~~ 290 (433)
+.++.+++||+.... ..++.+|..+++ |+.-...+.. . ...+.++.+++||+... -.
T Consensus 63 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------dg 127 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------DA 127 (582)
T ss_dssp CCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--------TT
T ss_pred ccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--------CC
Confidence 345679999998542 238999998875 9775433221 1 12345678999988532 13
Q ss_pred eEEEEECCCCc--eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECC------EEEEEec-----CCCeEEEEeCCCCc
Q 013929 291 CGEEYDLETET--WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNN------ELYAADY-----ADMEVRKYDKERRL 357 (433)
Q Consensus 291 ~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~------~ly~~gg-----~~~~i~~yd~~~~~ 357 (433)
.++.+|.+|++ |+.-...+...... ..+.++.++ .||+-.. ..+.++.||.++++
T Consensus 128 ~l~AlD~~TG~~~W~~~~~~~~~~~~~------------~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKKFADHGAGYTM------------TGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp EEEEEESSSCCEEEEEECSCGGGTCBC------------CSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred EEEEEECCCCCEEeeecCCCCCcCccc------------ccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 57899998875 87532211110000 012344555 6665321 25789999998874
Q ss_pred --EEE
Q 013929 358 --WFT 360 (433)
Q Consensus 358 --W~~ 360 (433)
|+.
T Consensus 196 ~~W~~ 200 (582)
T 1flg_A 196 EIWMR 200 (582)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 864
No 206
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.92 E-value=3.5 Score=40.76 Aligned_cols=179 Identities=9% Similarity=0.096 Sum_probs=85.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++..++.|+. ...+.+||.....-..+.... .....+. -+++.++.|+.+ ..+.+||.....-
T Consensus 355 ~g~~l~~~~~------dg~v~~~~~~~~~~~~~~~~~---~~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~ 419 (577)
T 2ymu_A 355 DGQTIASASD------DKTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDD------KTVKLWNRNGQLL 419 (577)
T ss_dssp TSSEEEEEET------TSEEEEEETTCCEEEEEECCS---SCEEEEEECTTSSCEEEEETT------SEEEEECTTCCEE
T ss_pred CCCEEEEEeC------CCEEEEEcCCCCEEEEecCCC---CCeEEEEECCCCCEEEEEeCC------CEEEEEeCCCCEE
Confidence 4555555543 234677885443333322111 1111122 255666666543 3467787544322
Q ss_pred EEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 254 KVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
..+..... .-.+++. -++++++.++.+ ..+..||.....-..+........ +++
T Consensus 420 ~~~~~~~~--~v~~~~~s~d~~~l~~~~~d-------~~v~~w~~~~~~~~~~~~~~~~v~----------------~~~ 474 (577)
T 2ymu_A 420 QTLTGHSS--SVWGVAFSPDDQTIASASDD-------KTVKLWNRNGQLLQTLTGHSSSVR----------------GVA 474 (577)
T ss_dssp EEEECCSS--CEEEEEECTTSSEEEEEETT-------SEEEEEETTSCEEEEEECCSSCEE----------------EEE
T ss_pred EEecCCCC--CeEEEEECCCCCEEEEEcCC-------CEEEEEECCCCEEEEEcCCCCCEE----------------EEE
Confidence 22221111 1111222 256666766654 246778876554433322111100 122
Q ss_pred -EECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 333 -VVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 333 -~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
.-++++++.++..+.|.+||...+.-..+..-.... .+++. .++++++.|+.+. .+.+|+.+
T Consensus 475 ~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v-------~~l~~s~dg~~l~s~~~dg------~v~lwd~~ 538 (577)
T 2ymu_A 475 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV-------RGVAFSPDGQTIASASDDK------TVKLWNRN 538 (577)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCE-------EEEEECTTSSCEEEEETTS------EEEEECTT
T ss_pred EcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCE-------EEEEEcCCCCEEEEEECcC------EEEEEeCC
Confidence 236788888888889999997554333332211111 22222 3567777776532 36677753
No 207
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.86 E-value=3.7 Score=37.80 Aligned_cols=179 Identities=8% Similarity=0.066 Sum_probs=88.1
Q ss_pred cceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcce
Q 013929 140 LLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCL 217 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~ 217 (433)
...+..||...+.|.....+.. .|...-..+.. ++..++.|+. ...+.+||..++.+..+..+......
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~g~~l~s~s~------D~~v~iw~~~~~~~~~~~~~~~h~~~ 107 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSE---GHQRTVRKVAWSPCGNYLASASF------DATTCIWKKNQDDFECVTTLEGHENE 107 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECS---SCSSCEEEEEECTTSSEEEEEET------TSCEEEEEECCC-EEEEEEECCCSSC
T ss_pred CCeEEEEEcCCCcceeeeeecc---ccCCcEEEEEECCCCCEEEEEEC------CCcEEEEEccCCCeEEEEEccCCCCC
Confidence 3446677777777643221111 01111111222 4556666654 23467788777766443332221111
Q ss_pred eeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC-eEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceE
Q 013929 218 FGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT-WKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCG 292 (433)
Q Consensus 218 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v 292 (433)
...+.+ ++.+++.|+.++ .+.+||..+.. +..+..+.........+. -++.+++.|+.++ .+
T Consensus 108 v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-------~i 174 (345)
T 3fm0_A 108 VKSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD-------TV 174 (345)
T ss_dssp EEEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS-------CE
T ss_pred ceEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC-------cE
Confidence 222222 566777776553 47788876543 332222221111122222 2566777777652 46
Q ss_pred EEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeC
Q 013929 293 EEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDK 353 (433)
Q Consensus 293 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~ 353 (433)
..||..++.|..+..+....... .+++. -+++.++.|+..+.|.+||.
T Consensus 175 ~~w~~~~~~~~~~~~~~~h~~~v-------------~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 175 KLYREEEDDWVCCATLEGHESTV-------------WSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EEEEEETTEEEEEEEECCCSSCE-------------EEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCEEEEEEecCCCCce-------------EEEEECCCCCEEEEEeCCCeEEEecc
Confidence 78888888776543222111110 01222 25677778888888888874
No 208
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.79 E-value=3.4 Score=40.15 Aligned_cols=57 Identities=9% Similarity=0.003 Sum_probs=36.3
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceec--CCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSS--GMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++.+|+|-|. ..|.||..+++... .+.+|. .-++....+++|+|-| +..++||+.+.
T Consensus 158 ~~~~yfFkG~--------~yw~yd~~~~~~~~~~w~gi~~---iDAA~~~~g~~YfFkG--------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDLTTGTKKERSWPAVGN---CTSALRWLGRYYCFQG--------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEETT--------EEEEEETTTTEEEEECCTTSCC---CSEEEEETTEEEEEET--------TEEEEECTTTC
T ss_pred CCeEEEEecc--------cEEEEecccceeecccCCCCCc---cchheeeCCceEEEEC--------CEEEEEcCccC
Confidence 6788988764 58999998775432 122332 2344445789999965 34667776554
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.77 E-value=1.5 Score=40.24 Aligned_cols=143 Identities=5% Similarity=-0.079 Sum_probs=77.8
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeE-EEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGS-ASLGEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++.+|+++.. ...+++||+.+++.+.+. .+. ...++ ..-++++++... ..+++||+.+++.+
T Consensus 60 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 60 SGTAWWFNIL------ERELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIASD--------DGLFLRDTATGVLT 122 (326)
T ss_dssp TTEEEEEEGG------GTEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEET--------TEEEEEETTTCCEE
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEEC--------CCEEEEECCCCcEE
Confidence 3567777532 236899999988765432 121 12222 234788877631 34899999999887
Q ss_pred EcCCCCCCC--cceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCE
Q 013929 255 VLPSMKNPR--KMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPL 330 (433)
Q Consensus 255 ~~~~~p~~r--~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~ 330 (433)
.+...+... ....... -+|++|+..... ........++.|| +++...+.. ..... .+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-~~~~~~~~l~~~~--~g~~~~~~~---~~~~~-------------~~ 183 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGR-KAETGAGSIYHVA--KGKVTKLFA---DISIP-------------NS 183 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEET-TCCTTCEEEEEEE--TTEEEEEEE---EESSE-------------EE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC-cCCCCceEEEEEe--CCcEEEeeC---CCccc-------------CC
Confidence 764432211 1111222 367777643211 1112335688888 465554421 00000 12
Q ss_pred EEEE-CC-EEEEEecCCCeEEEEeCC
Q 013929 331 VAVV-NN-ELYAADYADMEVRKYDKE 354 (433)
Q Consensus 331 ~~~~-~~-~ly~~gg~~~~i~~yd~~ 354 (433)
++.. ++ .+|+.....+.|++||..
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 3333 44 688887667899999975
No 210
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.74 E-value=5.4 Score=35.99 Aligned_cols=150 Identities=12% Similarity=0.023 Sum_probs=80.8
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWK 254 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 254 (433)
++.||+.-. ....+++||+..+. ...-..+ ...+.++.. +++|||...... ...++.||+.+++.+
T Consensus 42 ~g~lyv~d~------~~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 42 DGTIFVTNH------EVGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSDGTVE 108 (306)
T ss_dssp TSCEEEEET------TTTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT----SCEEEEEECTTSCEE
T ss_pred CCCEEEEeC------CCCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC----cceEEEEcCCCCeEE
Confidence 566887742 22358889987643 2111111 123344433 678888753211 124888999888887
Q ss_pred EcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCc---eEecCCCC--CCCCCCCCCCcCCCCcCCC
Q 013929 255 VLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETET---WTEIPNMS--PARGGAARGTEMPASAEAP 328 (433)
Q Consensus 255 ~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~---W~~~~~~p--~~r~~~~~~~~~~~~~~~~ 328 (433)
.+...+..+.....+. .++.+|+.-. ....++++|+.+.. |..-+.+. ...... ..+
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~-------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~----------~~p 171 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADS-------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF----------PAA 171 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEET-------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS----------CSE
T ss_pred EEEeCCCccccCcccccCCCcEEEEEC-------CCCeEEEEeCCCCcEeEEEECCccccccccCCC----------CcC
Confidence 7655554444333332 3456777521 12368899987642 21111100 000000 011
Q ss_pred CEEEEECCEEEEEecCCCeEEEEeCCC
Q 013929 329 PLVAVVNNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 329 ~~~~~~~~~ly~~gg~~~~i~~yd~~~ 355 (433)
..+...++.||+.....+.|++||...
T Consensus 172 ngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 172 NGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred CCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 234344568999987788999999875
No 211
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.66 E-value=9.2 Score=38.39 Aligned_cols=115 Identities=13% Similarity=0.180 Sum_probs=61.3
Q ss_pred EEEEeeccceEEEEecCCC--cEEeCCCCCCcccccc--CCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCc--ee
Q 013929 133 WVYFSCHLLEWEAFDPIRR--RWMHLPRMTSNECFMC--SDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNS--WS 206 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~--~W~~l~~~p~~~~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~ 206 (433)
-+|+......++++|..+. .|+.-...+......| ...+.++.+++||+... ...++.+|..|++ |+
T Consensus 70 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 70 VIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWK 142 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEE
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEee
Confidence 3555554345888998764 4876543332111001 12344567889988632 2358999999885 86
Q ss_pred cCCCCCCCc--ceeeEEEeCC------EEEEEccCCCCCCcCCceEEEeCCCCC--eEE
Q 013929 207 SGMRMNAPR--CLFGSASLGE------IAILAGGSDLEGNILSSAEMYNSETQT--WKV 255 (433)
Q Consensus 207 ~~~~~p~~r--~~~~~~~~~~------~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~ 255 (433)
.-..-+... ...+-++.++ .||+ |...........++.||+.+++ |+.
T Consensus 143 ~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 143 KKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred ecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 422111111 1112234455 6665 3221111124578999999876 864
No 212
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.64 E-value=5.9 Score=36.94 Aligned_cols=189 Identities=8% Similarity=0.036 Sum_probs=93.1
Q ss_pred EEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE---CCEEEEECCCCCCcccceeEEEEEcCCCc--eecC
Q 013929 134 VYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV---GTELLVFGRELTAHHISHVIYRYSILTNS--WSSG 208 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 208 (433)
|+.......+..||..+..-...-....+. .|...-..+.. ++.+++.|+. ...+.+||..... -..+
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sgs~------D~~v~~wd~~~~~~~~~~~ 245 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPS-GHTADVLSLSINSLNANMFISGSC------DTTVRLWDLRITSRAVRTY 245 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSSS-SCCSCEEEEEECSSSCCEEEEEET------TSCEEEEETTTTCCCCEEE
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccCC-CCccCeEEEEeecCCCCEEEEEEC------CCeEEEEECCCCCcceEEE
Confidence 444444556788888876654322111111 11111111222 5567777765 2357888876321 1111
Q ss_pred CCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEc-CCCCCC----Cc-ceeEE-EECCEEEEEcc
Q 013929 209 MRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVL-PSMKNP----RK-MCSGV-FMDGKFYVIGG 280 (433)
Q Consensus 209 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~----r~-~~~~~-~~~g~lyv~GG 280 (433)
.. ....-.+++.. ++..++.|+.++ .+.+||..++.-... ...+.. .. -.+++ ..+|++.+.|+
T Consensus 246 ~~--h~~~v~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 246 HG--HEGDINSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp CC--CSSCCCEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred CC--cCCCeEEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE
Confidence 11 00011122222 566677776553 478899887653221 111110 11 11222 23677777776
Q ss_pred ccCCCCcccceEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCCeEEEEeCCCC
Q 013929 281 IGGSDSKVLTCGEEYDLETETWTE-IPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 281 ~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
.++ .+.+||..+..-.. +..+.....+. -.+++ .-++..++.|+..+.|.+|+....
T Consensus 318 ~dg-------~i~vwd~~~~~~~~~~~~~~~~h~~~------------v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 318 SNG-------DCYVWDTLLAEMVLNLGTLQNSHEGR------------ISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TTS-------CEEEEETTTCCEEEEECCSCSSCCCC------------CCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCC-------CEEEEECCCCceEEEEecccCCCCCc------------eEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 552 47889987765432 22222211111 01222 236778888888899999987654
No 213
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.62 E-value=9.9 Score=38.67 Aligned_cols=111 Identities=15% Similarity=0.085 Sum_probs=56.8
Q ss_pred CCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCC-ceEecCCCCCCCCCCC
Q 013929 240 LSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETE-TWTEIPNMSPARGGAA 316 (433)
Q Consensus 240 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~r~~~~ 316 (433)
...++++|..++.-..+............+. -+|+..+++..+. ......++.+|+.++ ....+..........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~- 310 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNR--AQNECKVNAYDAETGRFVRTLFVETDKHYVE- 310 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECT--TSCEEEEEEEETTTCCEEEEEEEEECSSCCC-
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCC--CCCeeEEEEEECCCCceeeEEEEccCCCeEC-
Confidence 3568999999887665543211111112222 2666444444331 123457889999988 666553211110000
Q ss_pred CCCcCCCCcCCCCEEEEE--CCEEEEEecC--CCeEEEEeCCCCcEEEec
Q 013929 317 RGTEMPASAEAPPLVAVV--NNELYAADYA--DMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~--~~~ly~~gg~--~~~i~~yd~~~~~W~~v~ 362 (433)
........- +|++++.+.. ...++.+|...+..+.+.
T Consensus 311 ---------~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 311 ---------PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp ---------CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred ---------ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 000012333 6776655533 356888887777777664
No 214
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.49 E-value=8.2 Score=37.42 Aligned_cols=196 Identities=15% Similarity=0.120 Sum_probs=102.1
Q ss_pred cceEEEEecCCCcEEe--CCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCce------------
Q 013929 140 LLEWEAFDPIRRRWMH--LPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSW------------ 205 (433)
Q Consensus 140 ~~~~~~yd~~~~~W~~--l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W------------ 205 (433)
.+..+.||..+++... .+.+|. -.++....+++|+|-|. ..|.||+.+++-
T Consensus 166 G~~yw~yd~~~~~~~~~~w~gi~~-------iDAA~~~~g~~YfFkG~--------~y~rfd~~~~~v~~gyPk~is~~w 230 (460)
T 1qhu_A 166 GNRKWFWDLTTGTKKERSWPAVGN-------CTSALRWLGRYYCFQGN--------QFLRFNPVSGEVPPGYPLDVRDYF 230 (460)
T ss_dssp TTEEEEEETTTTEEEEECCTTSCC-------CSEEEEETTEEEEEETT--------EEEEECTTTCCCCTTCCEEHHHHT
T ss_pred cccEEEEecccceeecccCCCCCc-------cchheeeCCceEEEECC--------EEEEEcCccCcccCCCCcchhhcc
Confidence 3567889988765432 122322 12345567899999775 578999876542
Q ss_pred ecCCCCC------------------CCc-ceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeE--Ec----CCC
Q 013929 206 SSGMRMN------------------APR-CLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWK--VL----PSM 259 (433)
Q Consensus 206 ~~~~~~p------------------~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~--~~----~~~ 259 (433)
..++... .+. ..-++.. .++++|+|-| ...|++|...+.+. .+ +.+
T Consensus 231 ~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--------~~yWR~~~~~~~~~p~~Is~~Wpgl 302 (460)
T 1qhu_A 231 LSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQWPQG 302 (460)
T ss_dssp SCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--------TEEEECTTGGGCCCCEEGGGTCTTS
T ss_pred cCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--------CEEEEEecCCCCcCccchhhhccCC
Confidence 2222100 011 1123333 4689999855 23455554432221 11 122
Q ss_pred CCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCC----------CCCC--CCCCCCCCcCCCCcCC
Q 013929 260 KNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPN----------MSPA--RGGAARGTEMPASAEA 327 (433)
Q Consensus 260 p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~----------~p~~--r~~~~~~~~~~~~~~~ 327 (433)
|.. --++...++++|+|-|. .+++|+..++ .+..+. +|.. ....
T Consensus 303 P~~--IDAAf~~~~~~yfFkG~---------~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~I------------ 358 (460)
T 1qhu_A 303 PST--VDAAFSWEDKLYLIQDT---------KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAV------------ 358 (460)
T ss_dssp CSS--CSEEEEETTEEEEEETT---------EEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCC------------
T ss_pred CCC--CcEEEEECCeEEEEeCC---------EEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcc------------
Confidence 322 22344568999999653 3677876532 222221 1211 1111
Q ss_pred CCEEEE--ECCEEEEEecCCCeEEEEeCCCC---cEEEeccCCCcccCCCcccEEEEE-----------eCCEEEEEcCC
Q 013929 328 PPLVAV--VNNELYAADYADMEVRKYDKERR---LWFTIGRLPERANSMNGWGLAFRA-----------CGDRLIVIGGP 391 (433)
Q Consensus 328 ~~~~~~--~~~~ly~~gg~~~~i~~yd~~~~---~W~~v~~lp~~~~~~~~~~~~~~~-----------~~~~l~v~GG~ 391 (433)
.+++. .++++|++-| +..|+||.... .+...+.+|.... +++.. .++.+|+|-|.
T Consensus 359 -DAA~~~~~~~ktyfFkG--~~ywryd~~~~Pr~i~~~~~gi~~~vd------Aaf~~~~~~~~~~~~~~~~~~yfF~g~ 429 (460)
T 1qhu_A 359 -DAAFVCPGSSRLHIMAG--RRLWWLDLKSGAQATWTELPWPHEKVD------GALCMEKPLGPNSCSTSGPNLYLIHGP 429 (460)
T ss_dssp -CEEECCTTCCEEEEEET--TEEEEEEGGGGGGCCCEEECCSCSCCS------EEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred -cEEEEeCCCCEEEEEEC--CEEEEEECCCCccchhhhCCCCCCCcC------EEEecccccCcccccccCCeEEEEECC
Confidence 12333 2589999954 78999998743 2323333333321 44442 46789998875
No 215
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.48 E-value=11 Score=39.53 Aligned_cols=146 Identities=8% Similarity=-0.017 Sum_probs=85.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCC--CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGM--RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++.||+.-.. .+.++++++....-+.+. .+..| ..+++ .+++||+.-- .....++++++...
T Consensus 482 ~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~-----g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 482 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDW-----GTPAKIKKGGLNGV 547 (791)
T ss_dssp TTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEEC-----SSSCEEEEEETTSC
T ss_pred CCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecC-----CCCCeEEEEecCCC
Confidence 6789988532 346889998766544432 23222 23444 3689999831 11256888988765
Q ss_pred CeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 252 TWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
.-+.+..-.. ..-.++++- +++||+.=. ....|+++|+....=+.+..... .. ..+.
T Consensus 548 ~~~~lv~~~l-~~P~GLavD~~~~~LYwaD~-------~~~~I~~~d~dG~~~~~v~~~~~-~l------------~~P~ 606 (791)
T 3m0c_C 548 DIYSLVTENI-QWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEK-RL------------AHPF 606 (791)
T ss_dssp CEEEEECSSC-SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEEECTT-TT------------SSEE
T ss_pred ceEEEEeCCC-CCceEEEEecCCCeEEEEeC-------CCCcEEEEecCCCceEEEecCCC-cc------------CCCC
Confidence 4443322110 122234443 689999832 23578999986543333321100 00 0113
Q ss_pred EEEEECCEEEEEecCCCeEEEEeCCCC
Q 013929 330 LVAVVNNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 330 ~~~~~~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
++++.+++||+.....+.|++.|..++
T Consensus 607 glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 607 SLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 577889999999988899999997665
No 216
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.29 E-value=6.2 Score=40.46 Aligned_cols=103 Identities=6% Similarity=-0.050 Sum_probs=53.1
Q ss_pred ceEEEeCCC-CCeEEcCCCCCC-Cc-ceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCC----CC
Q 013929 242 SAEMYNSET-QTWKVLPSMKNP-RK-MCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPAR----GG 314 (433)
Q Consensus 242 ~~~~yd~~t-~~W~~~~~~p~~-r~-~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r----~~ 314 (433)
.++++|..+ ..-..+...... .. ..... -+|+..+++..+. ......++.+|+.+++...+....... ..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~--~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR--DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEET--TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecc--cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 788899988 765544322111 11 11222 4555444433321 123467899999998876653211110 01
Q ss_pred CCCCCcCCCCcCCCCEEEEECCEEEEEecCC--CeEEEEeCCCCcEEEec
Q 013929 315 AARGTEMPASAEAPPLVAVVNNELYAADYAD--MEVRKYDKERRLWFTIG 362 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~--~~i~~yd~~~~~W~~v~ 362 (433)
. ....-+|++++.+... ..++.+|...+ .+.+.
T Consensus 341 ~--------------~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 341 S--------------LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp C--------------CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred c--------------eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 0 1233466766665443 46888887666 55553
No 217
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.92 E-value=0.6 Score=51.51 Aligned_cols=185 Identities=9% Similarity=0.033 Sum_probs=86.7
Q ss_pred EEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC
Q 013929 135 YFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA 213 (433)
Q Consensus 135 ~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~ 213 (433)
........+..||..+.+...+....... ..+... ++.+ +.|+. ...+.+||..+++-...-....
T Consensus 1019 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~v------~~~~~~~~~~l-~~~~~------dg~v~vwd~~~~~~~~~~~~~~ 1085 (1249)
T 3sfz_A 1019 ISSSEDSVIQVWNWQTGDYVFLQAHQETV------KDFRLLQDSRL-LSWSF------DGTVKVWNVITGRIERDFTCHQ 1085 (1249)
T ss_dssp EEECSSSBEEEEETTTTEEECCBCCSSCE------EEEEECSSSEE-EEEES------SSEEEEEETTTTCCCEEEECCS
T ss_pred EEEcCCCEEEEEECCCCceEEEecCCCcE------EEEEEcCCCcE-EEEEC------CCcEEEEECCCCceeEEEcccC
Confidence 33334456778888777665433222111 111222 3444 34432 2358899988776422111111
Q ss_pred CcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccce
Q 013929 214 PRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTC 291 (433)
Q Consensus 214 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~ 291 (433)
.........-++..++.|+.++ .+.+||..+.. .+..+......-..+. -++++.+.|+.++ .
T Consensus 1086 ~~v~~~~~s~d~~~l~s~s~d~------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg-------~ 1150 (1249)
T 3sfz_A 1086 GTVLSCAISSDATKFSSTSADK------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG-------E 1150 (1249)
T ss_dssp SCCCCEEECSSSSSCEEECCSS------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS-------C
T ss_pred CcEEEEEECCCCCEEEEEcCCC------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC-------E
Confidence 1111122223556666666543 36678877653 2222222222222222 3677888887663 3
Q ss_pred EEEEECCCCceEec-CCCCCC--CCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCcE
Q 013929 292 GEEYDLETETWTEI-PNMSPA--RGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 292 v~~yd~~t~~W~~~-~~~p~~--r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
+.+||..+++-... .+.... ...|. ..-..++. -++++.+.++ +.+.+||..+++-
T Consensus 1151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1151 IRIWNVSDGQLLHSCAPISVEEGTATHG---------GWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDS 1210 (1249)
T ss_dssp CCEEESSSSCCCCCCCCCC-------CC---------SCCCEEEECTTSSCEEEES--SSEEEBCSSSCBC
T ss_pred EEEEECCCCceEEEeccccccccccccC---------ceEEEEEECCCCCEEEECC--CeEEEEECCCCce
Confidence 67789887653221 111100 01110 00012333 2555555554 6899999887754
No 218
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.72 E-value=1.8 Score=47.64 Aligned_cols=186 Identities=11% Similarity=0.067 Sum_probs=94.1
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
++..+++|+. ...+.+||..+++......-...........-+++.++.|+.+ ..+.+||..++....
T Consensus 972 ~g~~l~~g~~------~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d------g~i~vwd~~~~~~~~ 1039 (1249)
T 3sfz_A 972 HLEYVAFGDE------DGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED------SVIQVWNWQTGDYVF 1039 (1249)
T ss_dssp TSSEEEEEET------TSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS------SBEEEEETTTTEEEC
T ss_pred CCCEEEEEcC------CCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCceEE
Confidence 4555556543 2347888988775432211111111111222255666666644 358899999887654
Q ss_pred cCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEEC
Q 013929 256 LPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVN 335 (433)
Q Consensus 256 ~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~ 335 (433)
+.... ..-...+...+..++.|+.+ ..+.+||+.+++-...-......-. ......+
T Consensus 1040 ~~~~~--~~v~~~~~~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~v~--------------~~~~s~d 1096 (1249)
T 3sfz_A 1040 LQAHQ--ETVKDFRLLQDSRLLSWSFD-------GTVKVWNVITGRIERDFTCHQGTVL--------------SCAISSD 1096 (1249)
T ss_dssp CBCCS--SCEEEEEECSSSEEEEEESS-------SEEEEEETTTTCCCEEEECCSSCCC--------------CEEECSS
T ss_pred EecCC--CcEEEEEEcCCCcEEEEECC-------CcEEEEECCCCceeEEEcccCCcEE--------------EEEECCC
Confidence 32211 11222333333444555544 2578899887653221110111111 1233346
Q ss_pred CEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEE-EeCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 336 NELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFR-ACGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 336 ~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
+..++.|+..+.+.+||..+.. .+..+..... .-.+++ ..++++++.|+.++. +.+|+...
T Consensus 1097 ~~~l~s~s~d~~v~iwd~~~~~--~~~~l~~h~~----~v~~~~~s~dg~~lat~~~dg~------i~vwd~~~ 1158 (1249)
T 3sfz_A 1097 ATKFSSTSADKTAKIWSFDLLS--PLHELKGHNG----CVRCSAFSLDGILLATGDDNGE------IRIWNVSD 1158 (1249)
T ss_dssp SSSCEEECCSSCCCEECSSSSS--CSBCCCCCSS----CEEEEEECSSSSEEEEEETTSC------CCEEESSS
T ss_pred CCEEEEEcCCCcEEEEECCCcc--eeeeeccCCC----cEEEEEECCCCCEEEEEeCCCE------EEEEECCC
Confidence 7777888888899999987654 2222222111 112222 246778888875432 56777754
No 219
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=91.71 E-value=7.8 Score=35.46 Aligned_cols=167 Identities=18% Similarity=0.071 Sum_probs=92.9
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCc---eecCCCCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNS---WSSGMRMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++.||+.-- ..+.++++++.... +.....+..| .++++ .++.||+.-. ....++++++..
T Consensus 46 ~~~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~------~~~~I~~~~~dG 110 (318)
T 3sov_A 46 HGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDS------ETNRIEVSNLDG 110 (318)
T ss_dssp GTEEEEEET------TTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCEEEEEEC------CCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEEC------CCCEEEEEECCC
Confidence 478888742 23468888887652 2111122211 23333 4789999832 235788999876
Q ss_pred CCeEEcC--CCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 251 QTWKVLP--SMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 251 ~~W~~~~--~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
..-+.+. .+..| .+.++- +|.||+.--. ....|+++++....-+.+..- .. .
T Consensus 111 ~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~~--~l-------------~ 166 (318)
T 3sov_A 111 SLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG------EVPKIERAGMDGSSRFIIINS--EI-------------Y 166 (318)
T ss_dssp CSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS------SSCEEEEEETTSCSCEEEECS--SC-------------S
T ss_pred CcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC------CCCEEEEEEcCCCCeEEEEEC--CC-------------C
Confidence 5433332 22111 233443 5889987311 124688898864332222110 00 0
Q ss_pred CCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEecc--CCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 327 APPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIGR--LPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 327 ~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~~--lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
.+.++++. +++||+.....+.|+++|.....-+.+.. +..+ .+++..++.||+.-
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P--------~glav~~~~lywtd 225 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP--------FALTLFEDILYWTD 225 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCE--------EEEEEETTEEEEEE
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCc--------eEEEEeCCEEEEEe
Confidence 11245554 78999998888999999997654444432 2222 44555788888873
No 220
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.44 E-value=4.6 Score=38.86 Aligned_cols=204 Identities=12% Similarity=0.011 Sum_probs=98.2
Q ss_pred cEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCcee---
Q 013929 132 HWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWS--- 206 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~--- 206 (433)
..||+......+..+|+..+....+...... ...++.. ++.||+...... .....++.+++. +.|.
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~------P~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~~~-g~~~~~~ 220 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEYVSTVYSGLSK------VRTICWTHEADSMIITNDQNN--NDRPNNYILTRE-SGFKVIT 220 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTEEEEEECCCSC------EEEEEECTTSSEEEEEECCSC--TTSEEEEEEEGG-GTSCSEE
T ss_pred CeEEEEeCCCcEEEEECCCCEEEEEecCCCC------cceEEEeCCCCEEEEEeCCCC--cccceEEEEeCC-Cceeeee
Confidence 4566654336788999998887766431110 1112221 345888864211 122346667754 3343
Q ss_pred cCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCE-EEEEcccc
Q 013929 207 SGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGK-FYVIGGIG 282 (433)
Q Consensus 207 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~-lyv~GG~~ 282 (433)
.++.+.. .+.+++. ++.||+.-- ....+++||+.+..-..+...+.......+++ -+|+ ||+.--
T Consensus 221 ~l~~~~~---p~giavdp~~g~lyv~d~------~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~-- 289 (430)
T 3tc9_A 221 ELTKGQN---CNGAETHPINGELYFNSW------NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV-- 289 (430)
T ss_dssp EEEECSS---CCCEEECTTTCCEEEEET------TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET--
T ss_pred eeccCCC---ceEEEEeCCCCEEEEEEC------CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC--
Confidence 2222222 2344443 678998732 23579999998775433322222111223333 2454 888832
Q ss_pred CCCCcccceEEEEECC--CCceE---ecCCCCCCCCCCCCCCcCCCCcCCCC-EEEEE---------CCEEEEEecCCCe
Q 013929 283 GSDSKVLTCGEEYDLE--TETWT---EIPNMSPARGGAARGTEMPASAEAPP-LVAVV---------NNELYAADYADME 347 (433)
Q Consensus 283 ~~~~~~~~~v~~yd~~--t~~W~---~~~~~p~~r~~~~~~~~~~~~~~~~~-~~~~~---------~~~ly~~gg~~~~ 347 (433)
..+.|++|+.. ++... .+...+. ..+..-+....+.-..+. .+++. ++.||+.....+.
T Consensus 290 -----~~~~I~~~~~d~~~~~~~~~~~~ag~~g-~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~ 363 (430)
T 3tc9_A 290 -----NQHYILRSDYDWKTKRLTTPYIVCGQQG-AKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC 363 (430)
T ss_dssp -----TTTEEEEEEEETTTTEECCCEEEEECTT-CBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE
T ss_pred -----CCCEEEEEeCCcccccccceEEEeccCC-CCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE
Confidence 22456665543 33321 1111100 000000000000001112 23332 3699999877789
Q ss_pred EEEEeCCCCcEEEec
Q 013929 348 VRKYDKERRLWFTIG 362 (433)
Q Consensus 348 i~~yd~~~~~W~~v~ 362 (433)
|.++|+. +....+.
T Consensus 364 I~~i~~~-G~v~~~~ 377 (430)
T 3tc9_A 364 IRILTPQ-GRVTTFA 377 (430)
T ss_dssp EEEECTT-SEEEEEE
T ss_pred EEEECCC-CcEEEEE
Confidence 9999964 5666554
No 221
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.36 E-value=2.8 Score=37.94 Aligned_cols=139 Identities=12% Similarity=0.145 Sum_probs=73.0
Q ss_pred EEECCEEEEECCCCCCcccceeEEEEEcC-CCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 173 LAVGTELLVFGRELTAHHISHVIYRYSIL-TNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 173 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
+..++.||+... ...++.||+. ...|+...+.+. ..+.+.. ++.||+.. . -..++.||+.
T Consensus 104 ~~~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vgt-~------~~~l~~~d~~- 165 (330)
T 3hxj_A 104 TIFEDILYVTSM-------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVGS-N------DNYLYAINPD- 165 (330)
T ss_dssp EEETTEEEEECT-------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEEC-T------TSEEEEECTT-
T ss_pred eEECCEEEEEec-------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEEc-C------CCEEEEECCC-
Confidence 344888887642 2358899988 334654322111 1222333 67777742 1 2468889988
Q ss_pred CC--eEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCC-CceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 251 QT--WKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLET-ETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 251 ~~--W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t-~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
+. |+.-.. ... ..+.+. .++.+|+.. ..++.||... ..|+..... ....
T Consensus 166 g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t----------~~l~~~d~~g~~~~~~~~~~--~~~~------------ 218 (330)
T 3hxj_A 166 GTEKWRFKTN--DAI-TSAASIGKDGTIYFGS----------DKVYAINPDGTEKWNFYAGY--WTVT------------ 218 (330)
T ss_dssp SCEEEEEECS--SCC-CSCCEECTTCCEEEES----------SSEEEECTTSCEEEEECCSS--CCCS------------
T ss_pred CCEeEEEecC--CCc-eeeeEEcCCCEEEEEe----------CEEEEECCCCcEEEEEccCC--ccee------------
Confidence 43 654322 111 122233 367777763 2368888432 246654221 1111
Q ss_pred CCCEEEEE-CCEEEEEecCCCeEEEEeCCCCc-EEE
Q 013929 327 APPLVAVV-NNELYAADYADMEVRKYDKERRL-WFT 360 (433)
Q Consensus 327 ~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~-W~~ 360 (433)
+++.. +|.||+.. ..+.+.+||+.... |+.
T Consensus 219 ---~~~~~~~g~l~v~t-~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 219 ---RPAISEDGTIYVTS-LDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp ---CCEECTTSCEEEEE-TTTEEEEECTTSCEEEEE
T ss_pred ---ceEECCCCeEEEEc-CCCeEEEECCCCCEeEEe
Confidence 23333 45777753 45789999876554 543
No 222
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.16 E-value=2.9 Score=38.81 Aligned_cols=196 Identities=7% Similarity=-0.160 Sum_probs=94.6
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCE-EEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCccee
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTE-LLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLF 218 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~ 218 (433)
..++.+|..+.+...+...+... ....... ++. |++... .........++++|..+++++.+.. ..+....
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~-----~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~ 240 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWL-----GHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGESC 240 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCE-----EEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEEE
T ss_pred ceEEEEECCCCcEEeeccCCccc-----ccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCccc
Confidence 46788898887776554211110 0111122 233 444332 1111122468999998888777654 2211112
Q ss_pred e-EE-EeCCE-EEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCEEEEEccccC---------CC
Q 013929 219 G-SA-SLGEI-AILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGIGG---------SD 285 (433)
Q Consensus 219 ~-~~-~~~~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~~~---------~~ 285 (433)
. .+ .-+++ |++.....+ .....++++|+.++..+.+...+. .. ....- +|+++++.+... ..
T Consensus 241 ~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------C
T ss_pred cceEECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 1 22 22454 444422211 112349999999988776654432 11 22233 777766644210 00
Q ss_pred CcccceEEEEECCCCceEecCCCCCCC---------CCCCCCCcCCCCcCCCCEEEEECC-EEEEEec--CCCeEEEEeC
Q 013929 286 SKVLTCGEEYDLETETWTEIPNMSPAR---------GGAARGTEMPASAEAPPLVAVVNN-ELYAADY--ADMEVRKYDK 353 (433)
Q Consensus 286 ~~~~~~v~~yd~~t~~W~~~~~~p~~r---------~~~~~~~~~~~~~~~~~~~~~~~~-~ly~~gg--~~~~i~~yd~ 353 (433)
......++.+|+.++....+...+... ... .....-++ .|++... ....++.+|.
T Consensus 316 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHP-------------HPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp CCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCC-------------CCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cCCCCcEEEEecccCceEEccCCCCccccccccccCCCC-------------CceEccCCCeEEEEecCCCCceEEEEEE
Confidence 112356899999888765553222100 000 01222244 5555542 2346888888
Q ss_pred CCCcEEEe
Q 013929 354 ERRLWFTI 361 (433)
Q Consensus 354 ~~~~W~~v 361 (433)
.++.++.+
T Consensus 383 ~~~~~~~~ 390 (396)
T 3c5m_A 383 PESYKHLE 390 (396)
T ss_dssp CTTCC---
T ss_pred cccccccc
Confidence 88777654
No 223
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=91.12 E-value=4.6 Score=34.20 Aligned_cols=148 Identities=11% Similarity=0.072 Sum_probs=74.1
Q ss_pred EEEECCEEEEECCCCCCcccceeEEEEEcCCCc--e-ecC----CCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceE
Q 013929 172 SLAVGTELLVFGRELTAHHISHVIYRYSILTNS--W-SSG----MRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAE 244 (433)
Q Consensus 172 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 244 (433)
++...+++|+|-|. .+|+++...-. . +.+ +.+|. ....+....++++|+|-| +..|
T Consensus 11 ~~~~~g~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg--------~~yw 73 (196)
T 3c7x_A 11 VAMLRGEMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG--------DKHW 73 (196)
T ss_dssp EEEETTEEEEEETT--------EEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET--------TEEE
T ss_pred EEEcCCEEEEEECC--------EEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC--------CEEE
Confidence 44678999999775 47777643210 0 011 23443 222222224788999854 3467
Q ss_pred EEeCCCCCe---EEcCC----CCCCCcceeEEE---ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCC
Q 013929 245 MYNSETQTW---KVLPS----MKNPRKMCSGVF---MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGG 314 (433)
Q Consensus 245 ~yd~~t~~W---~~~~~----~p~~r~~~~~~~---~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~ 314 (433)
+|+..+... +.+.. +|.. .-.+|+ .++++|++-|.. .++||..+++-.. .-|.....
T Consensus 74 ~~~~~~~~~gyPk~I~~~~~glP~~--~IDAA~~~~~~g~~yfFkG~~---------yw~yd~~~~~v~~--gyPk~i~~ 140 (196)
T 3c7x_A 74 VFDEASLEPGYPKHIKELGRGLPTD--KIDAALFWMPNGKTYFFRGNK---------YYRFNEELRAVDS--EYPKNIKV 140 (196)
T ss_dssp EEETTEECTTCSEEGGGTCBSCCSS--CCSEEEEETTTTEEEEEETTE---------EEEEETTTTEECT--TCSEEGGG
T ss_pred EEeCCcccCCCCeEhhhcCCCCCCC--cccEEEEEccCCEEEEEECCE---------EEEEeCCcccccC--CCCccHHH
Confidence 887542110 12221 3322 222333 268999996633 5889987753211 11110000
Q ss_pred CCCCCcCCCCcCCCCEEEEE-CC-EEEEEecCCCeEEEEeCCCCc
Q 013929 315 AARGTEMPASAEAPPLVAVV-NN-ELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~-~~-~ly~~gg~~~~i~~yd~~~~~ 357 (433)
...+ + ....++... ++ ++|++- .+..++||..+++
T Consensus 141 ~~gi---p---~~idaAf~~~~~~~~YfFk--g~~y~r~d~~~~~ 177 (196)
T 3c7x_A 141 WEGI---P---ESPRGSFMGSDEVFTYFYK--GNKYWKFNNQKLK 177 (196)
T ss_dssp SBTC---C---SSCSEEEECTTSSEEEEEE--TTEEEEEETTTTE
T ss_pred CCCc---C---CCcceeEEecCCCEEEEEE--CCEEEEEECCcce
Confidence 0000 0 000134444 44 899994 4789999988764
No 224
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.09 E-value=2.7 Score=43.41 Aligned_cols=152 Identities=8% Similarity=0.019 Sum_probs=84.3
Q ss_pred ECCEEEEECCCCCCcccceeEEEEEcCCCceecCC--CCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGM--RMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
.++.||+.-. ..+.++++|+....-+.+. .+..|+ .+++ .+++||+..- .....++++++..
T Consensus 463 ~~g~LY~tD~------~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~-----~~~~~I~~~~~dG 528 (699)
T 1n7d_A 463 IHSNIYWTDS------VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDW-----GTPAKIKKGGLNG 528 (699)
T ss_dssp SSSBCEECCT------TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCC-----SSSCCEEBCCSSS
T ss_pred eCCcEEEEec------cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEccc-----CCCCeEEEEeCCC
Confidence 3678888742 2345888888766544332 222332 2233 3678887631 0125677777764
Q ss_pred CCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 251 QTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 251 ~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
..-+.+..... ....++++ .+++||+.-. ....|++||+....-+.+....... ..+
T Consensus 529 ~~~~~l~~~~l-~~PnGlavd~~~~~LY~aD~-------~~~~I~~~d~dG~~~~~~~~~~~~~-------------~~P 587 (699)
T 1n7d_A 529 VDIYSLVTENI-QWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNGGNRKTILEDEKRL-------------AHP 587 (699)
T ss_dssp CCCCEESCSSC-SSCCCEEECTTTCCEEEEET-------TTTEEEEECSSSSCCEEECCCSSSC-------------SSC
T ss_pred CCeeEEEeCCC-CCccEEEEeccCCEEEEEec-------CCCeEEEEccCCCceEEEEecCCcC-------------CCc
Confidence 43322221111 11223443 2578999832 2356889998754333332211110 122
Q ss_pred CEEEEECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 329 PLVAVVNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 329 ~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
.++++.++.||+.....+.|.++|+.+++-..+
T Consensus 588 ~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 588 FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CCCEEETTEEEEECSTTTCEEEEETTTEEEEEC
T ss_pred eEeEEECCEEEEEeCCCCeEEEEEccCCCceEE
Confidence 356778899999987778999999887654443
No 225
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=91.01 E-value=4.7 Score=39.95 Aligned_cols=131 Identities=12% Similarity=0.072 Sum_probs=72.7
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCC-CCcceeEE
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKN-PRKMCSGV 269 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~r~~~~~~ 269 (433)
..+.+||..+++... ..+...........+ ++++++.|+.+ ..+.+||..+..-.. .+.. ....-..+
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~~~~~~--~~~~~h~~~v~~~ 537 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQSREVKT--SRWAFRTSKINAI 537 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEE--CCSCCCSSCEEEE
T ss_pred CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCCCccee--EeecCCCCceeEE
Confidence 358899998876642 222222222222223 66777777654 348899998764322 2222 22222233
Q ss_pred EE------------CCEEEEEccccCCCCcccceEEEEECCCC--ceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEEC
Q 013929 270 FM------------DGKFYVIGGIGGSDSKVLTCGEEYDLETE--TWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVN 335 (433)
Q Consensus 270 ~~------------~g~lyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~ 335 (433)
.+ ++++++.|+.++ .+.+||+.+. ....+......... .....+
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg-------~i~iw~~~~~~~~~~~~~~h~~~v~~---------------l~~s~~ 595 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDT-------NIFIYSVKRPMKIIKALNAHKDGVNN---------------LLWETP 595 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTS-------CEEEEESSCTTCCEEETTSSTTCEEE---------------EEEEET
T ss_pred EEcCccccccccccCCCEEEEEcCCC-------cEEEEECCCCceechhhhcCccceEE---------------EEEcCC
Confidence 33 678888887663 4788999875 23332211111111 234457
Q ss_pred CEEEEEecCCCeEEEEeCCC
Q 013929 336 NELYAADYADMEVRKYDKER 355 (433)
Q Consensus 336 ~~ly~~gg~~~~i~~yd~~~ 355 (433)
+. .+.++..+.|.+||.++
T Consensus 596 ~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 596 ST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TE-EEEEETTSCEEEEEEC-
T ss_pred CC-eEEecCCceEEEEeeec
Confidence 88 77788888899998765
No 226
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.55 E-value=16 Score=37.00 Aligned_cols=207 Identities=13% Similarity=0.037 Sum_probs=115.2
Q ss_pred ccEEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE--CCEEEEECCCCCCcccceeEEEEEcCCCceecC
Q 013929 131 EHWVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV--GTELLVFGRELTAHHISHVIYRYSILTNSWSSG 208 (433)
Q Consensus 131 ~~~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 208 (433)
+++|.+. ...++...|.....-..+.+++.... ..++... ++.||+.--. .+.++++++.....+.+
T Consensus 6 ~~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~----~~~l~~d~~~~~lywtD~~------~~~I~r~~~~g~~~~~v 74 (628)
T 4a0p_A 6 EAFLLFS-RRADIRRISLETNNNNVAIPLTGVKE----ASALDFDVTDNRIYWTDIS------LKTISRAFMNGSALEHV 74 (628)
T ss_dssp CCEEEEE-ETTEEEEEESSCTTCEEECCCCSCSC----EEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEE
T ss_pred CcEEEEE-eCCcEEEEECCCCCcceEEEcCCCCc----eEEEEEECCCCEEEEEECC------CCeEEEEECCCCCcEEE
Confidence 4555554 45678888887654333322222111 1122222 5789987532 34688888876655443
Q ss_pred CCCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC--CCCCCCcceeEEEE--CCEEEEEcccc
Q 013929 209 MRMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP--SMKNPRKMCSGVFM--DGKFYVIGGIG 282 (433)
Q Consensus 209 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~lyv~GG~~ 282 (433)
-.... ....++++ .+++||+.-. ....++++++....=+.+. .+..| .+.++- +|.||+.--
T Consensus 75 ~~~g~-~~P~GlAvD~~~~~LY~tD~------~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~-- 142 (628)
T 4a0p_A 75 VEFGL-DYPEGMAVDWLGKNLYWADT------GTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEW-- 142 (628)
T ss_dssp ECSSC-SCCCEEEEETTTTEEEEEET------TTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEEC--
T ss_pred EeCCC-CCcceEEEEeCCCEEEEEEC------CCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCC--
Confidence 22111 11224444 4789999832 2467899998765433332 22222 244444 689999731
Q ss_pred CCCCcccceEEEEECCCCceEecCC-CCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEE
Q 013929 283 GSDSKVLTCGEEYDLETETWTEIPN-MSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 283 ~~~~~~~~~v~~yd~~t~~W~~~~~-~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
.....|+++++....-+.+.. +. ++.++++- +++||+.....+.|+++|.....=+
T Consensus 143 ----g~~~~I~r~~~dG~~~~~l~~~~~-----------------~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 143 ----GGKPKIDRAAMDGSERTTLVPNVG-----------------RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp ----SSSCEEEEEETTSCSCEEEECSCS-----------------SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ----CCCCEEEEEeCCCCceEEEECCCC-----------------CcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 013468888887655444321 11 11244444 5899999888889999998764323
Q ss_pred Eec-cCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 360 TIG-RLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 360 ~v~-~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
.+. .++.+ .+++..+++||+.-
T Consensus 202 v~~~~l~~P--------~glav~~~~ly~tD 224 (628)
T 4a0p_A 202 VIADDLPHP--------FGLTQYQDYIYWTD 224 (628)
T ss_dssp EEEECCSCE--------EEEEEETTEEEEEE
T ss_pred EeeccCCCc--------eEEEEECCEEEEec
Confidence 332 22222 45666788998875
No 227
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=90.53 E-value=0.087 Score=53.18 Aligned_cols=34 Identities=9% Similarity=-0.036 Sum_probs=31.5
Q ss_pred CCCchhHHHhhcccc-CcccchhhhhhcHHHHHhh
Q 013929 82 QPIGRDNSISCLIRC-SRSDYGSIASLNQSFRSLI 115 (433)
Q Consensus 82 ~~LP~dl~~~iL~rl-P~~~~~~~~~V~k~w~~ll 115 (433)
..||||++..||.+| |.....+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 469999999999999 8999999999999999874
No 228
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.38 E-value=17 Score=37.48 Aligned_cols=150 Identities=13% Similarity=0.057 Sum_probs=83.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKV 255 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 255 (433)
++.|++... +-+++||+.++++....... ...-..+...++.|+|.. ...+++||+.+++++.
T Consensus 73 ~g~lWigT~--------~Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWigt--------~~Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 73 NTYLYMGTD--------NGILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLGA--------LNGLYTYQLQSRKLTS 135 (758)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEEE--------TTEEEEEETTTCCEEE
T ss_pred CCcEEEEeC--------CCeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEEc--------CCcceeEeCCCCeEEE
Confidence 567777532 24789999999886522111 111122334578888752 1258899999988877
Q ss_pred cCC----CCCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCC-CCCCCCCCcCCCCcCCCC
Q 013929 256 LPS----MKNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPA-RGGAARGTEMPASAEAPP 329 (433)
Q Consensus 256 ~~~----~p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~~~~~~~ 329 (433)
+.. ++... -.+...- +|.|++.. . ..+..||+.+++++.+...... .... .-.
T Consensus 136 ~~~~~~~l~~~~-i~~i~~d~~g~lWigt-~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~-----------~i~ 194 (758)
T 3ott_A 136 FDTRRNGLPNNT-IYSIIRTKDNQIYVGT-Y--------NGLCRYIPSNGKFEGIPLPVHSSQSNL-----------FVN 194 (758)
T ss_dssp ECHHHHCCSCSC-EEEEEECTTCCEEEEE-T--------TEEEEEETTTTEEEEECCCCCTTCSSC-----------CEE
T ss_pred eccCCCCcCCCe-EEEEEEcCCCCEEEEe-C--------CCHhhCccCCCceEEecCCCccccccc-----------eeE
Confidence 631 22111 1122222 57777742 1 2368899999888765421110 0010 001
Q ss_pred EEEEE-C-CEEEEEecCCCeEEEEeCCCCcEEEeccCC
Q 013929 330 LVAVV-N-NELYAADYADMEVRKYDKERRLWFTIGRLP 365 (433)
Q Consensus 330 ~~~~~-~-~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp 365 (433)
+++.. + +.|++- . .+.+..||+.++++.....++
T Consensus 195 ~i~~d~~~~~lWig-t-~~Gl~~~~~~~~~~~~~~~l~ 230 (758)
T 3ott_A 195 SLLEDTTRQCVWIG-T-EGYLFQYFPSTGQIKQTEAFH 230 (758)
T ss_dssp EEEEETTTTEEEEE-E-EEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEECCCCEEEEE-E-CCCCeEEcCCCCeEEeccCCC
Confidence 23333 2 456763 2 347999999999887765443
No 229
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.34 E-value=8.1 Score=33.50 Aligned_cols=140 Identities=11% Similarity=0.096 Sum_probs=75.8
Q ss_pred ECCEEEEECCCCCCcccceeEEEEE---------------cCCCceecCCCCCCCcceeeEEE--eCCEEEEEccCCCCC
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYS---------------ILTNSWSSGMRMNAPRCLFGSAS--LGEIAILAGGSDLEG 237 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd---------------~~t~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 237 (433)
..+.+|+|-|. .+|+++ +.+..|..+|..+......-++. .++++|+|-|
T Consensus 12 ~~ge~~fFk~~--------~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg----- 78 (225)
T 3oyo_A 12 SEYEVYFFAKN--------KYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG----- 78 (225)
T ss_dssp STTEEEEEETT--------EEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET-----
T ss_pred CCCEEEEEECC--------EEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC-----
Confidence 36899999664 366666 12334555553322122232333 5899999955
Q ss_pred CcCCceEEEeCCCC----CeEE--------cCCCCCC--CcceeEEE---ECCEEEEEccccCCCCcccceEEEEECCCC
Q 013929 238 NILSSAEMYNSETQ----TWKV--------LPSMKNP--RKMCSGVF---MDGKFYVIGGIGGSDSKVLTCGEEYDLETE 300 (433)
Q Consensus 238 ~~~~~~~~yd~~t~----~W~~--------~~~~p~~--r~~~~~~~---~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~ 300 (433)
+..|+||..++ .-.. .+.+|.. ...--+|+ .++++|+|-|.. .++||..++
T Consensus 79 ---~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~~---------yw~~d~~~~ 146 (225)
T 3oyo_A 79 ---NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGNK---------YVRIAYDSK 146 (225)
T ss_dssp ---TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETTE---------EEEEETTTT
T ss_pred ---CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCCe---------EEEEECCCC
Confidence 45788876432 1111 0123321 01222333 378999997643 588987766
Q ss_pred ceEecC-----CCCC------CCCCCCCCCcCCCCcCCCCEEEE--ECCEEEEEecCCCeEEEEeCCC
Q 013929 301 TWTEIP-----NMSP------ARGGAARGTEMPASAEAPPLVAV--VNNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 301 ~W~~~~-----~~p~------~r~~~~~~~~~~~~~~~~~~~~~--~~~~ly~~gg~~~~i~~yd~~~ 355 (433)
+...-+ ..|. +..- .++.. .++++|++-| +..|+||..+
T Consensus 147 ~~~~gPk~I~~~fpg~~~~~f~~~i--------------DAAf~~~~~g~~YfFkG--~~ywr~d~~~ 198 (225)
T 3oyo_A 147 QLVGNIRNIGDGFPVLNGTEFESGI--------------DACFASHKEPEAYLFKG--QNYVRIDFTP 198 (225)
T ss_dssp EEEEEEEEHHHHCGGGTTSTTTTCC--------------SEEEECSSTTEEEEEET--TEEEEEECCT
T ss_pred eecCCCcchhhcCCCcccccCCCCc--------------CEEEEeCCCCEEEEEEC--CEEEEEeCCc
Confidence 544310 1111 1111 13444 3789999954 7899999983
No 230
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.31 E-value=1.3 Score=42.42 Aligned_cols=19 Identities=26% Similarity=0.244 Sum_probs=16.6
Q ss_pred EEEEEecCCCeEEEEeCCC
Q 013929 337 ELYAADYADMEVRKYDKER 355 (433)
Q Consensus 337 ~ly~~gg~~~~i~~yd~~~ 355 (433)
.+++.|+..+.|.+||..+
T Consensus 291 ~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRN 309 (430)
T ss_dssp TEEEEEETTSEEEEEETTC
T ss_pred CEEEEEeCCCeEEEEeCCC
Confidence 4788888899999999886
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=90.28 E-value=11 Score=34.60 Aligned_cols=53 Identities=11% Similarity=0.072 Sum_probs=35.4
Q ss_pred ECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCC
Q 013929 334 VNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGP 391 (433)
Q Consensus 334 ~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~ 391 (433)
-+|.||+.....+.|.+||+++++...+...|.... -.+++. -+++||+....
T Consensus 257 ~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~-----p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 257 KDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSW-----TDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp TTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSC-----EEEEEECTTSCEEEEECC
T ss_pred CCCCEEEEccCCCeEEEEECCCCCEEEEEECCceec-----CCeeEECCCCcEEEEeCc
Confidence 368999998778899999996677776654442111 123333 36789988753
No 232
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=90.04 E-value=12 Score=34.95 Aligned_cols=148 Identities=13% Similarity=0.037 Sum_probs=78.0
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCC---------ceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcC
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTN---------SWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNIL 240 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~---------~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 240 (433)
++....+++|+|-|. .+|+++.... .|. .+|.. ...+... .++++|+|-|
T Consensus 185 Av~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wp---gLP~~-iDAa~~~~~~g~~~fFkg-------- 244 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWP---TLPSG-IEAAYEIEARNQVFLFKD-------- 244 (365)
T ss_dssp CEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCS---SCCSS-CCEEEEEGGGTEEEEEET--------
T ss_pred eEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhcc---CCCCC-ccEEEEecCCCEEEEEeC--------
Confidence 345679999999765 4677765432 233 33421 1222222 2789999954
Q ss_pred CceEEEeCCCCC--e-EEcCC--CCCCCcceeEE-EE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCC
Q 013929 241 SSAEMYNSETQT--W-KVLPS--MKNPRKMCSGV-FM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPAR 312 (433)
Q Consensus 241 ~~~~~yd~~t~~--W-~~~~~--~p~~r~~~~~~-~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r 312 (433)
+..|+|+..+.. + +.+.. +|..-..--++ .. ++++|+|-|. ..++||..+++-.. .-|...
T Consensus 245 ~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~---------~yw~yd~~~~~v~~--gyPk~I 313 (365)
T 3ba0_A 245 DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN---------QYWRYDERRQMMDP--GYPKLI 313 (365)
T ss_dssp TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT---------EEEEEETTTTEECS--SCCCCH
T ss_pred CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC---------EEEEEeCCcceecC--CCCcch
Confidence 345666543211 1 22322 23211122233 33 5899999653 36889987654221 111110
Q ss_pred ----CCCCCCCcCCCCcCCCCEEEEE-CCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 313 ----GGAARGTEMPASAEAPPLVAVV-NNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 313 ----~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
.+. .....+++.. ++++|++-| +..|+||..+++-..
T Consensus 314 ~~~f~g~---------p~~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 314 TKNFQGI---------GPKIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHHSTTC---------CSSCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred hhcCCCC---------CCccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 000 0000245555 899999954 789999998877554
No 233
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.99 E-value=8.6 Score=36.95 Aligned_cols=203 Identities=13% Similarity=0.049 Sum_probs=96.6
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCcee---cC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWS---SG 208 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~---~~ 208 (433)
.||+......+.++|+.++....+...... ...++. .++.||+..... ......++.+++.. .+. .+
T Consensus 154 ~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~------P~giavd~dG~lyVad~~~--~~~~~gv~~~~~~~-~~~~~~~~ 224 (433)
T 4hw6_A 154 DLYWVGQRDAFRHVDFVNQYVDIKTTNIGQ------CADVNFTLNGDMVVVDDQS--SDTNTGIYLFTRAS-GFTERLSL 224 (433)
T ss_dssp EEEEECBTSCEEEEETTTTEEEEECCCCSC------EEEEEECTTCCEEEEECCS--CTTSEEEEEECGGG-TTCCEEEE
T ss_pred EEEEEeCCCCEEEEECCCCEEEEeecCCCC------ccEEEECCCCCEEEEcCCC--CcccceEEEEECCC-Ceeccccc
Confidence 455543336788999988887766441110 111222 245588875321 11123356666543 232 22
Q ss_pred CCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe-EEcCCCCCCCcceeEEEE-CC-EEEEEccccC
Q 013929 209 MRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW-KVLPSMKNPRKMCSGVFM-DG-KFYVIGGIGG 283 (433)
Q Consensus 209 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~p~~r~~~~~~~~-~g-~lyv~GG~~~ 283 (433)
+.+.. ...+++. ++.|||.-. ....+++||+.+..- +.+............++. +| .||+.--
T Consensus 225 ~~~~~---P~giavd~~~G~lyv~d~------~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~--- 292 (433)
T 4hw6_A 225 CNARG---AKTCAVHPQNGKIYYTRY------HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN--- 292 (433)
T ss_dssp EECSS---BCCCEECTTTCCEEECBT------TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET---
T ss_pred cccCC---CCEEEEeCCCCeEEEEEC------CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC---
Confidence 22211 2233333 678888732 235699999987765 332211111122233332 34 5888832
Q ss_pred CCCcccceEEEEECC--CCceE---ecCCCCCCCCCCCCCCcCCCCcCCCCEEEE----------ECCEEEEEecCCCeE
Q 013929 284 SDSKVLTCGEEYDLE--TETWT---EIPNMSPARGGAARGTEMPASAEAPPLVAV----------VNNELYAADYADMEV 348 (433)
Q Consensus 284 ~~~~~~~~v~~yd~~--t~~W~---~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~ly~~gg~~~~i 348 (433)
..+.|.++|.. +.... .+...+ ...+..-+....+.-..+..+++ .++.||+.....+.|
T Consensus 293 ----~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I 367 (433)
T 4hw6_A 293 ----GKHCIYRVDYNRETGKLAVPYIVCGQH-SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTV 367 (433)
T ss_dssp ----TTTEEEEEEBCTTTCCBCCCEEEEECT-TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEE
T ss_pred ----CCCEEEEEeCCCCCcccCcEEEEEecC-CCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEE
Confidence 23467776654 44321 111000 00000000000000112223554 357899998878899
Q ss_pred EEEeCCCCcEEEec
Q 013929 349 RKYDKERRLWFTIG 362 (433)
Q Consensus 349 ~~yd~~~~~W~~v~ 362 (433)
.++++ ++....+.
T Consensus 368 ~~~~~-~G~v~t~~ 380 (433)
T 4hw6_A 368 RVLTP-EGRVTTYA 380 (433)
T ss_dssp EEECT-TSEEEEEE
T ss_pred EEECC-CCCEEEEE
Confidence 99997 45665554
No 234
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.98 E-value=5.4 Score=36.12 Aligned_cols=144 Identities=9% Similarity=0.048 Sum_probs=72.1
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCcee-cCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWS-SGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++..++.|+. ...+.+||..+++-. .+.. ....-.+++. -++.+++.|+.++ .+.+||.....-
T Consensus 76 dg~~l~s~s~------D~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~------~i~vwd~~~~~~ 141 (319)
T 3frx_A 76 DGAYALSASW------DKTLRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIISGSRDK------TIKVWTIKGQCL 141 (319)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEEEETTS------CEEEEETTSCEE
T ss_pred CCCEEEEEeC------CCEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCeE
Confidence 4555555553 346889999887532 2211 0111112222 2556677776553 477788765433
Q ss_pred EEcCCCCCCCcceeEEEE-------CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcC
Q 013929 254 KVLPSMKNPRKMCSGVFM-------DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAE 326 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~~-------~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~ 326 (433)
..+..... .-...... ++.+++.|+.+ ..+..||+.+.+-... +.......
T Consensus 142 ~~~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-------~~i~~wd~~~~~~~~~--~~~h~~~v----------- 199 (319)
T 3frx_A 142 ATLLGHND--WVSQVRVVPNEKADDDSVTIISAGND-------KMVKAWNLNQFQIEAD--FIGHNSNI----------- 199 (319)
T ss_dssp EEECCCSS--CEEEEEECCC------CCEEEEEETT-------SCEEEEETTTTEEEEE--ECCCCSCE-----------
T ss_pred EEEeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-------CEEEEEECCcchhhee--ecCCCCcE-----------
Confidence 32221110 01111111 23355666655 2467888877543221 11000010
Q ss_pred CCCEEEE-ECCEEEEEecCCCeEEEEeCCCCc
Q 013929 327 APPLVAV-VNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 327 ~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.+++. -++++++.|+..+.|.+||..+++
T Consensus 200 --~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 200 --NTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp --EEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred --EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 01222 267788888888999999998875
No 235
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.94 E-value=4.4 Score=36.52 Aligned_cols=192 Identities=9% Similarity=-0.063 Sum_probs=92.4
Q ss_pred EEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEE-ECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCC
Q 013929 135 YFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-VGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNA 213 (433)
Q Consensus 135 ~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~ 213 (433)
++......++.||+. .+...+...... ...++. -++++|+.... ...+.+||+. ++.+.+.....
T Consensus 61 ~~d~~~~~i~~~~~~-g~~~~~~~~~~~------~~gl~~d~dG~l~v~~~~------~~~v~~~~~~-g~~~~~~~~~~ 126 (305)
T 3dr2_A 61 WSDLVGRRVLGWRED-GTVDVLLDATAF------TNGNAVDAQQRLVHCEHG------RRAITRSDAD-GQAHLLVGRYA 126 (305)
T ss_dssp EEETTTTEEEEEETT-SCEEEEEESCSC------EEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEECEET
T ss_pred EEECCCCEEEEEeCC-CCEEEEeCCCCc------cceeeECCCCCEEEEECC------CCEEEEECCC-CCEEEEEeccC
Confidence 333345678888884 444333211110 011122 25677776321 1357888886 66654432111
Q ss_pred -C---cceeeEEEeCCEEEEE----ccCCC-------CCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CC-EEE
Q 013929 214 -P---RCLFGSASLGEIAILA----GGSDL-------EGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DG-KFY 276 (433)
Q Consensus 214 -~---r~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~ly 276 (433)
. +....++.-++.||+. |-... .......+++||+.+++.+.+. .. ....+.+.. ++ .||
T Consensus 127 ~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~-~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 127 GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL-DHPNGLAFSPDEQTLY 203 (305)
T ss_dssp TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE-SSEEEEEECTTSSEEE
T ss_pred CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC-CCCcceEEcCCCCEEE
Confidence 1 1111222237788885 32210 0011357999999888877654 11 111223332 44 477
Q ss_pred EEccccCCCCcccceEEEEECCCCceEe---cCCCCCCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCCeEEEEe
Q 013929 277 VIGGIGGSDSKVLTCGEEYDLETETWTE---IPNMSPARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADMEVRKYD 352 (433)
Q Consensus 277 v~GG~~~~~~~~~~~v~~yd~~t~~W~~---~~~~p~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~~i~~yd 352 (433)
+...... ......+++||+..+.... +...+... +..++ ..+|+||+.. .+.|.+||
T Consensus 204 v~~~~~~--~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~---------------pdgi~~d~~G~lwv~~--~~gv~~~~ 264 (305)
T 3dr2_A 204 VSQTPEQ--GHGSVEITAFAWRDGALHDRRHFASVPDGL---------------PDGFCVDRGGWLWSSS--GTGVCVFD 264 (305)
T ss_dssp EEECCC-----CCCEEEEEEEETTEEEEEEEEECCSSSC---------------CCSEEECTTSCEEECC--SSEEEEEC
T ss_pred EEecCCc--CCCCCEEEEEEecCCCccCCeEEEECCCCC---------------CCeEEECCCCCEEEec--CCcEEEEC
Confidence 7643210 0112468889887654221 11111111 11233 3467888764 45699999
Q ss_pred CCCCcEEEec
Q 013929 353 KERRLWFTIG 362 (433)
Q Consensus 353 ~~~~~W~~v~ 362 (433)
+..+.-..+.
T Consensus 265 ~~g~~~~~~~ 274 (305)
T 3dr2_A 265 SDGQLLGHIP 274 (305)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9766555543
No 236
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.83 E-value=6.8 Score=37.92 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=77.3
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCC---------CceecCCCCCCCcceeeEEE--eCCEEEEEccCCCCCCc
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILT---------NSWSSGMRMNAPRCLFGSAS--LGEIAILAGGSDLEGNI 239 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t---------~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 239 (433)
++..+.+.+|+|-|. .+|+++... ..|..+ |.. .. ++.. .++++|+|=|
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~L---P~~-iD-Aa~~~~~~g~~~fFKg------- 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQL---PNG-LE-AAYEFADRDEVRFFKG------- 326 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTS---CSS-CC-EEEEEGGGTEEEEEET-------
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCC---CCC-ee-EEEEEcCCCeEEEEeC-------
Confidence 455689999999765 356665443 334433 322 11 2222 2689999954
Q ss_pred CCceEEEeCCCC--Ce-EEcC---CCCCCCcceeEE-EE--CCEEEEEccccCCCCcccceEEEEECCCCceEe-----c
Q 013929 240 LSSAEMYNSETQ--TW-KVLP---SMKNPRKMCSGV-FM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-----I 305 (433)
Q Consensus 240 ~~~~~~yd~~t~--~W-~~~~---~~p~~r~~~~~~-~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-----~ 305 (433)
+.+|+|+..+- .+ +.+. -+|.....--++ .. ++++|+|-|. ..|+||..+.+-.. +
T Consensus 327 -~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~---------~yw~yd~~~~~~~~gYPk~I 396 (450)
T 1su3_A 327 -NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN---------KYWRYDEYKRSMDPGYPKMI 396 (450)
T ss_dssp -TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT---------EEEEEETTTTEECSSCSEEH
T ss_pred -CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC---------EEEEEeCCCccccCCCCcch
Confidence 34667764321 00 1111 122111112223 22 6899999663 36889877543211 1
Q ss_pred ----CCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 306 ----PNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 306 ----~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
+.+|.. - .+++..++++|++- .+..|+||..+++=..+
T Consensus 397 ~~~fpgip~~--i--------------DAA~~~~g~~YFFk--g~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 397 AHDFPGIGHK--V--------------DAVFMKDGFFYFFH--GTRQYKFDPKTKRILTL 438 (450)
T ss_dssp HHHSTTSCSC--C--------------SEEEEETTEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred hhcCCCCCCC--c--------------cEEEEcCCeEEEEe--CCEEEEEECCcceEecc
Confidence 111111 1 24566789999995 46889999988765543
No 237
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=89.66 E-value=6.5 Score=40.15 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=73.9
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.+++.|+. ...+.+||..+++-.. +.. +...-.+++. .++..++.|+.+ ..+.++|.....=
T Consensus 441 ~g~~l~sgs~------Dg~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D------~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 441 DGQFALSGSW------DGELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVSASRD------RTIKLWNTLGECK 506 (694)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEEEETT------SCEEEECTTSCEE
T ss_pred CCCEEEEEeC------CCcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEEEeCC------CEEEEEECCCCcc
Confidence 4566666654 3458899988765321 111 1111112222 255566666654 3467777655432
Q ss_pred EEcCC-CCCCCcceeEEEE--CC--EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 254 KVLPS-MKNPRKMCSGVFM--DG--KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 254 ~~~~~-~p~~r~~~~~~~~--~g--~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
..+.. ....+.....+.+ ++ .+++.|+.+ ..+.+||+.+.+-... +.......
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-------~~v~vwd~~~~~~~~~--~~~h~~~v------------- 564 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-------KTVKVWNLSNCKLRST--LAGHTGYV------------- 564 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-------SCEEEEETTTCCEEEE--ECCCSSCE-------------
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-------CeEEEEECCCCcEEEE--EcCCCCCE-------------
Confidence 22221 1111222222332 22 356666655 2478899887654321 11000000
Q ss_pred CEEEE-ECCEEEEEecCCCeEEEEeCCCCc
Q 013929 329 PLVAV-VNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 329 ~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.+++. -++.+++.|+..+.|.+||..+++
T Consensus 565 ~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 565 STVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 01222 267788888888999999998875
No 238
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=89.65 E-value=12 Score=34.17 Aligned_cols=145 Identities=11% Similarity=0.037 Sum_probs=84.0
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecC--CCCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSG--MRMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQ 251 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~ 251 (433)
++.||+.-.. .+.++++++....-+.+ ..+..| ..+++ .++.||+.--. ....++++++...
T Consensus 90 ~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~-----~~~~I~r~~~dG~ 155 (318)
T 3sov_A 90 GEKLYWTDSE------TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG-----EVPKIERAGMDGS 155 (318)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS-----SSCEEEEEETTSC
T ss_pred CCeEEEEECC------CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC-----CCCEEEEEEcCCC
Confidence 6889987432 24688888865433322 222222 23333 36899987310 1356889988754
Q ss_pred CeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 252 TWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 252 ~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
.=+.+.... -....+.++- +++||+.-. ....|+++|+....-+.+..- .. ..+.
T Consensus 156 ~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~-------~~~~I~~~d~dG~~~~~~~~~---~~------------~~P~ 212 (318)
T 3sov_A 156 SRFIIINSE-IYWPNGLTLDYEEQKLYWADA-------KLNFIHKSNLDGTNRQAVVKG---SL------------PHPF 212 (318)
T ss_dssp SCEEEECSS-CSCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECS---CC------------SCEE
T ss_pred CeEEEEECC-CCCccEEEEeccCCEEEEEEC-------CCCEEEEEcCCCCceEEEecC---CC------------CCce
Confidence 322221111 1122344443 789999822 345789999875333333210 00 1223
Q ss_pred EEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 330 LVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 330 ~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
++++.++.+|+.....+.|.++|+.+++
T Consensus 213 glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 213 ALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 6778899999998778899999997664
No 239
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.22 E-value=3.1 Score=37.51 Aligned_cols=157 Identities=11% Similarity=-0.013 Sum_probs=75.3
Q ss_pred EEEeecc-ceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEE----CCCCC-------CcccceeEEEEEcC
Q 013929 134 VYFSCHL-LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVF----GRELT-------AHHISHVIYRYSIL 201 (433)
Q Consensus 134 l~~~~~~-~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~ 201 (433)
++++... ..+..||+. .+...+...............++.-++.||+. |-... .......+++||+.
T Consensus 99 l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 99 LVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 4554433 568888886 66655532211111111111122236788885 32110 01123579999999
Q ss_pred CCceecCCCCCCCcceeeEEEe-CC-EEEEEccCCCCCCcCCceEEEeCCCCCeEE---cCCCCCCCcceeEE-EECCEE
Q 013929 202 TNSWSSGMRMNAPRCLFGSASL-GE-IAILAGGSDLEGNILSSAEMYNSETQTWKV---LPSMKNPRKMCSGV-FMDGKF 275 (433)
Q Consensus 202 t~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~---~~~~p~~r~~~~~~-~~~g~l 275 (433)
+++.+.+..+ .. ...++.. ++ .||+....... .....+++||...+.... +...+... ..+.+ --+|+|
T Consensus 178 ~g~~~~~~~~--~~-p~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdgi~~d~~G~l 252 (305)
T 3dr2_A 178 GSPLQRMADL--DH-PNGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGALHDRRHFASVPDGL-PDGFCVDRGGWL 252 (305)
T ss_dssp SCCCEEEEEE--SS-EEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSC-CCSEEECTTSCE
T ss_pred CCcEEEEecC--CC-CcceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCCccCCeEEEECCCCC-CCeEEECCCCCE
Confidence 8888765411 11 1223332 33 58887432110 112578899887654211 11111111 11222 235777
Q ss_pred EEEccccCCCCcccceEEEEECCCCceEec
Q 013929 276 YVIGGIGGSDSKVLTCGEEYDLETETWTEI 305 (433)
Q Consensus 276 yv~GG~~~~~~~~~~~v~~yd~~t~~W~~~ 305 (433)
|+..+ ..+.+||+.......+
T Consensus 253 wv~~~---------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 253 WSSSG---------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp EECCS---------SEEEEECTTSCEEEEE
T ss_pred EEecC---------CcEEEECCCCCEEEEE
Confidence 77531 2488999976655544
No 240
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=89.21 E-value=13 Score=33.89 Aligned_cols=62 Identities=13% Similarity=0.121 Sum_probs=32.9
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE-cCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKV-LPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETE 300 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~ 300 (433)
++.+++.|+.+ ..+.+||..+++-.. +.... ..-.+++. -+++.++.||.++ .+..||+...
T Consensus 87 ~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d~-------~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD------KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAER-------EIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT------SEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETTS-------CEEEEESSSC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCCC-------EEEEEeccCC
Confidence 45566666644 458889988875422 21110 11112222 2566667777652 4677887644
No 241
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=89.07 E-value=2.2 Score=38.15 Aligned_cols=137 Identities=12% Similarity=0.063 Sum_probs=68.9
Q ss_pred eeEEEEEcCCCceecCCCCCCCcce-eeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCL-FGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF 270 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~ 270 (433)
+.+.+||..+++-.+.-.+...... .+++.. +++.++.|+.+ ..+.++|..+++-... +...........
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~~~--~~~h~~~~~~~~ 116 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRN--MTSHSARVGSLS 116 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEE--EECCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeEEE--ecCccceEEEee
Confidence 3588999998876543222222111 222222 56777777755 3578899888753221 111122223344
Q ss_pred ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEE
Q 013929 271 MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRK 350 (433)
Q Consensus 271 ~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~ 350 (433)
.++.+.+.|+..+ .+..++..+................ ......++..++.++..+.|.+
T Consensus 117 ~~~~~l~s~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 117 WNSYILSSGSRSG-------HIHHHDVRVAEHHVATLSGHSQEVC-------------GLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp EETTEEEEEETTS-------EEEEEETTSSSCEEEEEECCSSCEE-------------EEEECTTSSEEEEEETTSCEEE
T ss_pred cCCCEEEEEecCC-------ceEeeecCCCceeEEEEcCccCceE-------------EEEEcCCCCEEEEEecCcceeE
Confidence 4556666665442 2344555444322111000000000 0122235666777778889999
Q ss_pred EeCCCCc
Q 013929 351 YDKERRL 357 (433)
Q Consensus 351 yd~~~~~ 357 (433)
||..+++
T Consensus 177 wd~~~~~ 183 (318)
T 4ggc_A 177 WPSAPGE 183 (318)
T ss_dssp EESSCBT
T ss_pred EECCCCc
Confidence 9988653
No 242
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.89 E-value=13 Score=33.75 Aligned_cols=21 Identities=19% Similarity=0.154 Sum_probs=17.2
Q ss_pred CCEEEEEecCCCeEEEEeCCC
Q 013929 335 NNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~ 355 (433)
+++.++.|+..+.|.+||..+
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSC
T ss_pred CCCEEEEEcCCCeEEEEECCC
Confidence 677788888889999999843
No 243
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.77 E-value=22 Score=36.01 Aligned_cols=160 Identities=10% Similarity=-0.010 Sum_probs=90.7
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF- 270 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~- 270 (433)
++...|..+..-..+-+++.-+...+++.. +++||+.-- ....++++++.....+.+..... ..-.+.++
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD 88 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGL-DYPEGMAVD 88 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSC-SCCCEEEEE
T ss_pred cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCC-CCcceEEEE
Confidence 467777766543322222222333444443 689999842 24578889888766555432211 11224444
Q ss_pred -ECCEEEEEccccCCCCcccceEEEEECCCCceEecC--CCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEe-cC
Q 013929 271 -MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIP--NMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAAD-YA 344 (433)
Q Consensus 271 -~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~g-g~ 344 (433)
.+++||+.-. ....|+++++....=+.+. .+..| ..+++. +|.||+.. |.
T Consensus 89 ~~~~~LY~tD~-------~~~~I~v~~~dG~~~~~l~~~~l~~P-----------------~~iavdp~~G~lY~tD~g~ 144 (628)
T 4a0p_A 89 WLGKNLYWADT-------GTNRIEVSKLDGQHRQVLVWKDLDSP-----------------RALALDPAEGFMYWTEWGG 144 (628)
T ss_dssp TTTTEEEEEET-------TTTEEEEEETTSTTCEEEECSSCCCE-----------------EEEEEETTTTEEEEEECSS
T ss_pred eCCCEEEEEEC-------CCCEEEEEecCCCcEEEEEeCCCCCc-----------------ccEEEccCCCeEEEeCCCC
Confidence 4789999832 2357899998654322221 12211 145554 68999987 44
Q ss_pred CCeEEEEeCCCCcEEEec-cCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 345 DMEVRKYDKERRLWFTIG-RLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 345 ~~~i~~yd~~~~~W~~v~-~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
...|++.++....-+.+. .+..+. +.++...+++||+.=.
T Consensus 145 ~~~I~r~~~dG~~~~~l~~~~~~P~------GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 145 KPKIDRAAMDGSERTTLVPNVGRAN------GLTIDYAKRRLYWTDL 185 (628)
T ss_dssp SCEEEEEETTSCSCEEEECSCSSEE------EEEEETTTTEEEEEET
T ss_pred CCEEEEEeCCCCceEEEECCCCCcc------eEEEccccCEEEEEEC
Confidence 679999999877655443 333222 2444334688888753
No 244
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.69 E-value=10 Score=32.04 Aligned_cols=142 Identities=12% Similarity=0.108 Sum_probs=77.5
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCC--cee--c----CCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcC
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTN--SWS--S----GMRMNAPRCLFGSASL--GEIAILAGGSDLEGNIL 240 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~--~----~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 240 (433)
+++..++++|+|-|. .+|+++.... ... . -+.+|.. .. ++... ++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------- 72 (195)
T ss_dssp EEEEETTEEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET--------
T ss_pred EEEEeCCEEEEEECC--------EEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC--------
Confidence 345679999999765 4788876542 111 1 1234432 11 22222 678999965
Q ss_pred CceEEEeCCCCCe-EEcCC--CCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEe---------cC
Q 013929 241 SSAEMYNSETQTW-KVLPS--MKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE---------IP 306 (433)
Q Consensus 241 ~~~~~yd~~t~~W-~~~~~--~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~---------~~ 306 (433)
+..|+|+..+..- +.+.. +|.....-.+|+ .++++|++-|. ..+.||..+++=.. .+
T Consensus 73 ~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~---------~ywr~d~~~~~~~~gyPr~i~~~w~ 143 (195)
T 1itv_A 73 RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR---------RLWRFDVKAQMVDPRSASEVDRMFP 143 (195)
T ss_dssp TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT---------EEEEEETTTTEECGGGCEEHHHHST
T ss_pred CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC---------EEEEEeCCcccccCCCccChhhcCC
Confidence 3466776542110 11111 222111222333 36899999653 35889987753211 01
Q ss_pred CCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 307 NMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 307 ~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.+|.. - .++...++.+|++-| ...++||..+..
T Consensus 144 Gvp~~--i--------------daa~~~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 144 GVPLD--T--------------HDVFQFREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp TSCSS--C--------------SEEEEETTEEEEEET--TEEEEEECCTTC
T ss_pred CCCCC--C--------------CEEEEeCCeEEEEeC--CEEEEEECCccE
Confidence 12211 1 256667899999954 679999988765
No 245
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.26 E-value=10 Score=37.87 Aligned_cols=197 Identities=9% Similarity=-0.026 Sum_probs=101.6
Q ss_pred ccEEEEeeccceEEEEecC--CCcE-EeCCCCCCccccccCCceEEEE-----CC-EEEEECCCCCCcccceeEEEEEcC
Q 013929 131 EHWVYFSCHLLEWEAFDPI--RRRW-MHLPRMTSNECFMCSDKESLAV-----GT-ELLVFGRELTAHHISHVIYRYSIL 201 (433)
Q Consensus 131 ~~~l~~~~~~~~~~~yd~~--~~~W-~~l~~~p~~~~~~~~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~yd~~ 201 (433)
..++|+......+.+||+. +.+= .+++.-..++ .++.. ++ .+|+..- ..+.+.++|..
T Consensus 208 Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-------~ia~s~~~~pDGk~l~v~n~------~~~~v~ViD~~ 274 (567)
T 1qks_A 208 GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-------SIETSKMEGWEDKYAIAGAY------WPPQYVIMDGE 274 (567)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-------EEEECCSTTCTTTEEEEEEE------ETTEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-------eeEEccccCCCCCEEEEEEc------cCCeEEEEECC
Confidence 3467777666789999985 3322 2222211221 12222 33 6666542 34568889987
Q ss_pred CCceec-CC--CC--------CCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE
Q 013929 202 TNSWSS-GM--RM--------NAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF 270 (433)
Q Consensus 202 t~~W~~-~~--~~--------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~ 270 (433)
|.+=.. ++ .+ |.+|.....++.++..+++-- .....+++.|........+..++..+.-|....
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~ 349 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-----KETGKILLVDYTDLNNLKTTEISAERFLHDGGL 349 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-----cCCCeEEEEecCCCccceeeeeeccccccCceE
Confidence 765322 22 11 123333322233333333311 123567888887765544444455555554443
Q ss_pred -ECCEEEEEccccCCCCcccceEEEEECCCCceEe---c-CCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEec
Q 013929 271 -MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE---I-PNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADY 343 (433)
Q Consensus 271 -~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~---~-~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg 343 (433)
-+|+.+++.-. ..+.+.++|+++++-.. + ...|.+..+ ..... .+.+|+.+.
T Consensus 350 ~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g---------------~~~~~p~~g~v~~t~~ 408 (567)
T 1qks_A 350 DGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG---------------ANFVHPTFGPVWATSH 408 (567)
T ss_dssp CTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSSBCCTTC---------------EEEEETTTEEEEEEEB
T ss_pred CCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEeccCcCCCCccc---------------eeeECCCCCcEEEeCC
Confidence 34554433221 23568899999886332 2 223443333 12233 367887763
Q ss_pred -CCCeEEEEeCCCC-----cEEEeccCCC
Q 013929 344 -ADMEVRKYDKERR-----LWFTIGRLPE 366 (433)
Q Consensus 344 -~~~~i~~yd~~~~-----~W~~v~~lp~ 366 (433)
..+.|-++|..+. .|+.+..++.
T Consensus 409 ~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 409 MGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 2467889988763 3888776553
No 246
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=88.19 E-value=18 Score=34.24 Aligned_cols=169 Identities=9% Similarity=0.033 Sum_probs=90.8
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCC----CeEEcCCCCCCCccee
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQ----TWKVLPSMKNPRKMCS 267 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~~~~p~~r~~~~ 267 (433)
.+.+.|+....+..+.+ ......+++.. +++||+.-- ....++++++... ....+.... .....+
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~g 163 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD-IQAPDG 163 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECSS-CSCEEE
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeCC-CCCccc
Confidence 57777777776655422 12223344443 689999832 2356888888752 222221111 112223
Q ss_pred EEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecC--CCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEE
Q 013929 268 GVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIP--NMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAA 341 (433)
Q Consensus 268 ~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~ 341 (433)
.++ .+++||+.-.. ...|+++|+....-+.+. .+..+ ..+++. ++.||+.
T Consensus 164 lavD~~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~~~~~~~P-----------------~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP-----------------RAIVVDPVHGFMYWT 219 (400)
T ss_dssp EEEETTTTEEEEEETT-------TTEEEEECTTTCSEEEEEECSSCCE-----------------EEEEEETTTTEEEEE
T ss_pred EEEEecCCceEEEECC-------CCeEEEEeCCCCceEEEEeCCCCCc-----------------ceEEEecccCeEEEE
Confidence 444 37899998432 346888998876544442 11111 134553 6899998
Q ss_pred e-cCCCeEEEEeCCCCcEEEec--cCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 342 D-YADMEVRKYDKERRLWFTIG--RLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 342 g-g~~~~i~~yd~~~~~W~~v~--~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
. +....|+++++....=+.+. .+..+. +.++...+++||+.-... ..+..++++
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~~~~~l~~P~------glavd~~~~~lY~aD~~~------~~I~~~d~d 276 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSLVTENIQWPN------GITLDLLSGRLYWVDSKL------HSISSIDVN 276 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEEECSSCSCEE------EEEEETTTTEEEEEETTT------TEEEEEETT
T ss_pred eCCCCCEEEEEeCCCCccEEEEECCCCceE------EEEEEeCCCEEEEEECCC------CEEEEEeCC
Confidence 7 34578999998765433332 222221 244444578999985321 235555554
No 247
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=88.04 E-value=9.6 Score=35.94 Aligned_cols=154 Identities=10% Similarity=-0.001 Sum_probs=78.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceec-CCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSS-GMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.+++.|+. ...+.+||..+++-.. +...+....-.+++.. ++..++.|+.+ ..+.+||..+...
T Consensus 181 ~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTN------LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEET------TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTTTEE
T ss_pred CCCEEEEEeC------CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCCccE
Confidence 3666666654 3468999998775422 2111111111222222 56677777654 3488999988654
Q ss_pred EEcCCCCCCCcceeEEE-----ECCEEEEEccccCCCCcccceEEEEECCCCceEec-C---C-C------CCC------
Q 013929 254 KVLPSMKNPRKMCSGVF-----MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI-P---N-M------SPA------ 311 (433)
Q Consensus 254 ~~~~~~p~~r~~~~~~~-----~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~-~---~-~------p~~------ 311 (433)
...-..+....-..++. -++.+++.|+.+ ..+.+||+.+.+-... . . . |..
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 249 IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred EEEEecCCCCceEEEEeccccCCCccEEEEEcCC-------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccc
Confidence 22111111111111111 134566666544 3578888877652211 0 0 0 000
Q ss_pred -CCC--CCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 312 -RGG--AARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 312 -r~~--~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
..+ + ...-.+++..++.+++.|+..+.|.+||..+.+
T Consensus 322 ~~~~~~~---------~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 322 NFCGIRS---------LNALSTISVSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp CCCCCCS---------GGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG
T ss_pred eeccccc---------CCceEEEEECCceEEEecCCCCeEEEEECCCcc
Confidence 000 0 000113455588888899989999999998765
No 248
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.04 E-value=9.2 Score=36.06 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=56.8
Q ss_pred CceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCC
Q 013929 241 SSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARG 318 (433)
Q Consensus 241 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~ 318 (433)
..++++|..++.-..+-.+......-.++. -+|+.++.|+.++ .+.+||+.+++-...-.-... .
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-------~v~iWd~~~~~~~~~~~~h~~--~---- 191 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLRNMTSHSA--R---- 191 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEEECCCSS--C----
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-------eEEEEEcCCCcEEEEEeCCCC--c----
Confidence 357888888877655433332222222222 2677888887663 478899988753322111111 1
Q ss_pred CcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 319 TEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
...+..++.+.+.|+....+..+|.....
T Consensus 192 ----------v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 192 ----------VGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp ----------EEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred ----------eEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 13455677888888888999999987654
No 249
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=88.01 E-value=13 Score=35.73 Aligned_cols=100 Identities=10% Similarity=-0.003 Sum_probs=51.3
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEE-E-CCEEEEECCCC---CCcccceeEEEEEcCCCcee-cCCCCC-C
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA-V-GTELLVFGREL---TAHHISHVIYRYSILTNSWS-SGMRMN-A 213 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~-~-~~~iyv~GG~~---~~~~~~~~~~~yd~~t~~W~-~~~~~p-~ 213 (433)
+.+.++|+.+.+=..- ++.... . .++. - +..+|+.--.. ......+.+.++|+.+++-. .++ ++ .
T Consensus 99 ~~VsVID~~t~~vv~~--I~vG~~----P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~-v~g~ 170 (426)
T 3c75_H 99 TQQFVIDGSTGRILGM--TDGGFL----P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIE-LPDA 170 (426)
T ss_dssp EEEEEEETTTTEEEEE--EEECSS----C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE-ETTC
T ss_pred CeEEEEECCCCEEEEE--EECCCC----C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEE-CCCc
Confidence 5788899987654321 111110 1 1122 1 44677763100 00113457999999998753 222 11 1
Q ss_pred C-----cceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 214 P-----RCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 214 ~-----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
+ ...+.+++- +.++||..- ...+.+.++|..+++=
T Consensus 171 ~r~~~g~~P~~~~~spDGk~lyV~n~-----~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 171 PRFLVGTYQWMNALTPDNKNLLFYQF-----SPAPAVGVVDLEGKTF 212 (426)
T ss_dssp CCCCBSCCGGGSEECTTSSEEEEEEC-----SSSCEEEEEETTTTEE
T ss_pred cccccCCCcceEEEcCCCCEEEEEec-----CCCCeEEEEECCCCeE
Confidence 1 112333332 558888731 1136789999998753
No 250
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.90 E-value=14 Score=32.82 Aligned_cols=31 Identities=10% Similarity=0.136 Sum_probs=22.3
Q ss_pred CCEEEEEecCCCeEEEEeCCCC-cEEEeccCC
Q 013929 335 NNELYAADYADMEVRKYDKERR-LWFTIGRLP 365 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~-~W~~v~~lp 365 (433)
++.+++.|+..+.|.+||..++ .|..+..+.
T Consensus 317 ~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKATYSNEFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEecCCCcEEEEecCcCcchhheeehc
Confidence 5667777777888888988764 677766443
No 251
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=87.90 E-value=8.9 Score=37.06 Aligned_cols=163 Identities=10% Similarity=-0.026 Sum_probs=79.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCC----ceecCCC---C----CCCcceeeEEEeCCEEEEE--ccCCCCCCcCCc
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTN----SWSSGMR---M----NAPRCLFGSASLGEIAILA--GGSDLEGNILSS 242 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~~~---~----p~~r~~~~~~~~~~~iyv~--GG~~~~~~~~~~ 242 (433)
..++|+-|.. .+.++++|..++ +-.+.-. + ...+-.+..+.-++ |||. |+.++ .....
T Consensus 95 r~~l~v~~l~------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g--~~~g~ 165 (462)
T 2ece_A 95 RRFLIVPGLR------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG--EGPGG 165 (462)
T ss_dssp SCEEEEEBTT------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS--CSCCE
T ss_pred CCEEEEccCC------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC--CCCCe
Confidence 4567776653 467999998876 2221110 1 11122222333455 7774 33332 33578
Q ss_pred eEEEeCCCCCeEE-cC--CCCCCCcceeEEE-ECCEEEEEcc----------ccCCC--CcccceEEEEECCCCceEecC
Q 013929 243 AEMYNSETQTWKV-LP--SMKNPRKMCSGVF-MDGKFYVIGG----------IGGSD--SKVLTCGEEYDLETETWTEIP 306 (433)
Q Consensus 243 ~~~yd~~t~~W~~-~~--~~p~~r~~~~~~~-~~g~lyv~GG----------~~~~~--~~~~~~v~~yd~~t~~W~~~~ 306 (433)
+.++|..|.+=.. .+ ..+. ...+.... -++++++..- ..... ....+.|.+||+.+++ .+.
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~-~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~ 242 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQ-YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIH 242 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTC-CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEE
T ss_pred EEEEECCCCeEEEEEccCCCCc-cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--Eee
Confidence 9999999875321 11 1111 12222322 2444444431 11100 0346789999998763 333
Q ss_pred CCCCCCCCCCCCCcCCCCcCCCCEEEEE-----CCEEEEEec-----CCCeEEEEeCCCCcEEEec
Q 013929 307 NMSPARGGAARGTEMPASAEAPPLVAVV-----NNELYAADY-----ADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 307 ~~p~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~ly~~gg-----~~~~i~~yd~~~~~W~~v~ 362 (433)
.++.+..+. .+.-+.+ +...|+... ..+.|++|....++|+.+.
T Consensus 243 tI~vg~~g~------------~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 243 SLTLGEENR------------MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp EEESCTTEE------------EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred EEecCCCCC------------ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 222221110 0011111 346777765 5667776655568887665
No 252
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=87.77 E-value=16 Score=37.32 Aligned_cols=145 Identities=10% Similarity=-0.007 Sum_probs=81.9
Q ss_pred ceeEEEEEcCC------C--ceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCC---CeEEcCCCC
Q 013929 192 SHVIYRYSILT------N--SWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQ---TWKVLPSMK 260 (433)
Q Consensus 192 ~~~~~~yd~~t------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~p 260 (433)
.+.++++|..+ + .++.+..-.... ......-++.||+.+..+. ....++++|..+. .|+.+.+-.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC
Confidence 46799999876 4 576664322221 1223334678888865432 2467899999876 488764422
Q ss_pred CCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCc-eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CC
Q 013929 261 NPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETET-WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NN 336 (433)
Q Consensus 261 ~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~ 336 (433)
....-...... ++.+++....+ ....++++|+.+++ ...+. .+ .+. ...+.. ++
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~-----g~~~l~~~~~~~g~~~~~l~-~~---~~~-------------v~~~~~s~d~ 391 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHD-----VKNTLQLHDLATGALLKIFP-LE---VGS-------------VVGYSGQKKD 391 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEET-----TEEEEEEEETTTCCEEEEEC-CC---SSE-------------EEEEECCTTC
T ss_pred CCCeEEEEEEEcCCEEEEEEEEC-----CEEEEEEEECCCCCEEEecC-CC---Cce-------------EEEEecCCCC
Confidence 21122234455 67787776544 23568889986654 44443 22 110 011111 33
Q ss_pred -EEEEEe-c--CCCeEEEEeCCCCc--EEEec
Q 013929 337 -ELYAAD-Y--ADMEVRKYDKERRL--WFTIG 362 (433)
Q Consensus 337 -~ly~~g-g--~~~~i~~yd~~~~~--W~~v~ 362 (433)
.+++.. + ....++.||..+++ .+.+.
T Consensus 392 ~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 392 TEIFYQFTSFLSPGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp SEEEEEEECSSCCCEEEEEETTSSSCCCEEEE
T ss_pred CEEEEEEeCCCCCCEEEEEECCCCccceEEee
Confidence 555442 2 34689999998877 66554
No 253
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=87.61 E-value=7.4 Score=34.84 Aligned_cols=100 Identities=13% Similarity=0.012 Sum_probs=52.0
Q ss_pred CceEEEeCCCCCeEEcCCCCCCC-cceeEEE-ECC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCC----C
Q 013929 241 SSAEMYNSETQTWKVLPSMKNPR-KMCSGVF-MDG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPAR----G 313 (433)
Q Consensus 241 ~~~~~yd~~t~~W~~~~~~p~~r-~~~~~~~-~~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r----~ 313 (433)
..+.++|+.+.+-...-..+... ....++. -+| .+|+.+... ..+.+||+.+.+-...-..+... .
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------TEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-------CeEEEEECCCCCeEeeEEcCCccccccc
Confidence 46888998887543221222210 1122332 245 677765432 35889999887644321111100 1
Q ss_pred CCCCCCcCCCCcCCCCEEEEE-CC-EEEEEec-----------CCCeEEEEeCCCCcEEEe
Q 013929 314 GAARGTEMPASAEAPPLVAVV-NN-ELYAADY-----------ADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~-~~-~ly~~gg-----------~~~~i~~yd~~~~~W~~v 361 (433)
- ..++.. ++ .+|+... ..+.|.+||..+++....
T Consensus 84 ~--------------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 84 L--------------FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp T--------------TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred c--------------cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 1 123332 44 6666631 357899999998875443
No 254
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=87.57 E-value=15 Score=36.75 Aligned_cols=174 Identities=10% Similarity=0.021 Sum_probs=87.6
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCeEE-cCCCCC---CCc-c-
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTWKV-LPSMKN---PRK-M- 265 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~---~r~-~- 265 (433)
.+.+||..+.+... .+.........+.+ ++++++.|+.++ .+.+||..++.-.. +..... ... .
T Consensus 171 ~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~------~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 171 TVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG------TIVLYNGVDGTKTGVFEDDSLKNVAHSGSV 242 (611)
T ss_dssp CEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEECBCTTSSSCSSSSCE
T ss_pred eEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECCC------cEEEEECCCCcEeeeeccccccccccCCCE
Confidence 47778876554322 11111111122222 567777777553 47888988776432 211000 111 1
Q ss_pred eeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC
Q 013929 266 CSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA 344 (433)
Q Consensus 266 ~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~ 344 (433)
.+++. -+++.++.|+.+ ..+.+||+.+.+....-......... ...+..++..++.++.
T Consensus 243 ~~v~~spdg~~l~s~s~D-------~~v~lWd~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~s~s~ 302 (611)
T 1nr0_A 243 FGLTWSPDGTKIASASAD-------KTIKIWNVATLKVEKTIPVGTRIEDQ-------------QLGIIWTKQALVSISA 302 (611)
T ss_dssp EEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSGGGC-------------EEEEEECSSCEEEEET
T ss_pred EEEEECCCCCEEEEEeCC-------CeEEEEeCCCCceeeeecCCCCccce-------------eEEEEEcCCEEEEEeC
Confidence 12222 267777777765 35788999887654321111111110 1233446666777777
Q ss_pred CCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 345 DMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 345 ~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
.+.+..||+.++.-... +..... .-.+++. .+++.++.|+.+. .+.+|+..
T Consensus 303 d~~i~~~~~~~~~~~~~--~~gh~~----~v~~l~~spdg~~l~s~s~D~------~v~~Wd~~ 354 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQV--RYGHNK----AITALSSSADGKTLFSADAEG------HINSWDIS 354 (611)
T ss_dssp TCCEEEEETTTTEEEEE--ECCCSS----CEEEEEECTTSSEEEEEETTS------CEEEEETT
T ss_pred CCcEEEEeCCCCCcceE--EcCCCC----CEEEEEEeCCCCEEEEEeCCC------cEEEEECC
Confidence 88899999887763222 211111 1122322 3566677776533 25667664
No 255
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=87.32 E-value=29 Score=35.69 Aligned_cols=172 Identities=13% Similarity=0.054 Sum_probs=86.5
Q ss_pred eeEEEEEcCCCceecCCCCCCCccee-eEEEe-CCEEEEEccCCCC--------CCcCCceEEEeCCCCCe--EEcCCCC
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLF-GSASL-GEIAILAGGSDLE--------GNILSSAEMYNSETQTW--KVLPSMK 260 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~--------~~~~~~~~~yd~~t~~W--~~~~~~p 260 (433)
..++++|..+++..... . ..... ..+.. +..|++. ..+.. ......+++++..+..- ..+...+
T Consensus 189 ~~i~v~dl~tg~~~~~~-~--~~~~~~~~~wspD~~l~~~-~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~ 264 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-L--KWVKFSGLAWLGNDALLYS-RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP 264 (741)
T ss_dssp EEEEEEETTTCCEEEEE-E--EEEESCCCEESTTSEEEEE-ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEEECCCCCCCCcc-C--CCceeccEEEECCCEEEEE-EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC
Confidence 46999999999875431 1 11111 12221 4334443 32221 01245688888876542 1222222
Q ss_pred C-CCcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCC--c-eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEEC
Q 013929 261 N-PRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETE--T-WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVN 335 (433)
Q Consensus 261 ~-~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~--~-W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~ 335 (433)
. +....... .-+|+..++....+. ...+.++.+|+.+. . |+.+......... .+.-.+
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~---------------~~~~dg 327 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGT--DPVNTVHVARVTNGKIGPVTALIPDLKAQWD---------------FVDGVG 327 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTT--CSCCEEEEEEEETTEECCCEEEECSSSSCEE---------------EEEEET
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccC--CCcceEEEEECCCCCCcccEEecCCCCceEE---------------EEeccC
Confidence 1 12222222 335654444433211 12457889999877 6 8777532211111 123456
Q ss_pred CEEEEEec---CCCeEEEEeCCC--CcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCC
Q 013929 336 NELYAADY---ADMEVRKYDKER--RLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGP 391 (433)
Q Consensus 336 ~~ly~~gg---~~~~i~~yd~~~--~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~ 391 (433)
+.||+... ....|+.+|..+ ..|+.+-+-.... . ..+...+++|++....
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~--l----~~~~~~~~~lv~~~~~ 382 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN--L----ESVGIAGNRLFASYIH 382 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE--E----EEEEEEBTEEEEEEEE
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe--E----EEEEEECCEEEEEEEE
Confidence 77887753 246799999988 5798875322111 0 2233447777776643
No 256
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=87.01 E-value=20 Score=36.35 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=71.8
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcc-eeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKM-CSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
++++++.|+.+ ..+.++|..+..-... +...... .+++. .+++.++.|+.++ .+.+||.....
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D~-------~i~iwd~~~~~ 505 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRDR-------TIKLWNTLGEC 505 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETTS-------CEEEECTTSCE
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCCC-------EEEEEECCCCc
Confidence 56667777654 3588899887643211 1111111 12222 2566667776652 46778875543
Q ss_pred eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CC--EEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEE
Q 013929 302 WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NN--ELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLA 377 (433)
Q Consensus 302 W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~--~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~ 377 (433)
-..+.......... -..+.+ ++ .+++.|+..+.|.+||..+.+-... +.... +.-.+
T Consensus 506 ~~~~~~~~~~h~~~-------------v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~--~~~h~----~~v~~ 566 (694)
T 3dm0_A 506 KYTISEGGEGHRDW-------------VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST--LAGHT----GYVST 566 (694)
T ss_dssp EEEECSSTTSCSSC-------------EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEE--ECCCS----SCEEE
T ss_pred ceeeccCCCCCCCc-------------EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEE--EcCCC----CCEEE
Confidence 22221111111110 012222 22 4667777889999999987654322 22111 11123
Q ss_pred EEE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 378 FRA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 378 ~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
++. .++++++.|+.+. .+.+|+..
T Consensus 567 v~~spdg~~l~sg~~Dg------~i~iwd~~ 591 (694)
T 3dm0_A 567 VAVSPDGSLCASGGKDG------VVLLWDLA 591 (694)
T ss_dssp EEECTTSSEEEEEETTS------BCEEEETT
T ss_pred EEEeCCCCEEEEEeCCC------eEEEEECC
Confidence 333 3567888887643 25567664
No 257
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=86.86 E-value=0.27 Score=46.50 Aligned_cols=144 Identities=6% Similarity=-0.053 Sum_probs=59.6
Q ss_pred EEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECC
Q 013929 221 ASLGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLE 298 (433)
Q Consensus 221 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~ 298 (433)
++.++.||+.+. -..++.+|..+++ |+.-.. ......++.++++|+.++.+ ..++.+|.+
T Consensus 6 ~v~~~~v~~gs~-------dg~v~a~d~~tG~~~W~~~~~----~~~s~p~~~~g~~~v~~s~d-------g~l~a~d~~ 67 (369)
T 2hz6_A 6 TLPETLLFVSTL-------DGSLHAVSKRTGSIKWTLKED----PVLQVPTHVEEPAFLPDPND-------GSLYTLGSK 67 (369)
T ss_dssp --CTTEEEEEET-------TSEEEEEETTTCCEEEEEECC----CSCCCC-----CCEEECTTT-------CCEEEC---
T ss_pred eeeCCEEEEEcC-------CCEEEEEECCCCCEEEEecCC----CceecceEcCCCEEEEeCCC-------CEEEEEECC
Confidence 445677777532 2368999998875 875431 11123345567788886544 247889986
Q ss_pred CC--ceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCCc--EEEeccCCCcccCCCc
Q 013929 299 TE--TWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERRL--WFTIGRLPERANSMNG 373 (433)
Q Consensus 299 t~--~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~~--W~~v~~lp~~~~~~~~ 373 (433)
++ .|+.-...+..... +.++ .++.|| +|...+.++.+|+++++ |+.-..- ..
T Consensus 68 tG~~~w~~~~~~~~~~~~---------------sp~~~~~~~v~-~g~~dg~v~a~D~~tG~~~w~~~~~~--~~----- 124 (369)
T 2hz6_A 68 NNEGLTKLPFTIPELVQA---------------SPCRSSDGILY-MGKKQDIWYVIDLLTGEKQQTLSSAF--AD----- 124 (369)
T ss_dssp --CCSEECSCCHHHHHTT---------------CSCC-----CC-CCEEEEEEEEECCC---------------------
T ss_pred CCceeeeeeccCcccccc---------------CceEecCCEEE-EEeCCCEEEEEECCCCcEEEEecCCC--cc-----
Confidence 65 46642221111111 1122 355555 34445679999988764 6542211 10
Q ss_pred ccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecCCCCCCceE
Q 013929 374 WGLAFRACGDRLIVIGGPKASGEGFIELNSWVPSEGPPQWNL 415 (433)
Q Consensus 374 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~W~~ 415 (433)
..+..++.||+.+ . ...+..|+....+..|+.
T Consensus 125 ---~~~p~~~~v~~~~-~------dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 125 ---SLSPSTSLLYLGR-T------EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp -----------EEEEE-E------EEEEECCCSSSSSCCCEE
T ss_pred ---cccccCCEEEEEe-c------CCEEEEEECCCCCEEEeE
Confidence 1112345555432 2 124666777666667874
No 258
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.62 E-value=20 Score=33.12 Aligned_cols=180 Identities=5% Similarity=-0.103 Sum_probs=91.7
Q ss_pred ceeEEEEEcCCCceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcce-e-E
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMC-S-G 268 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~-~ 268 (433)
...+.+||+.+.+-..... ....-..++. -++++++.++. ..+.+++..++.-............. . .
T Consensus 156 d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp SCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred CCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 3468899998876543211 1111112222 25566655541 34677777776543322221111111 1 2
Q ss_pred EEECCEEEEEccccCCCCcccceEEEEECCCCceEecCC--CCCCCCCCCCCCcCCCCcCCCCEE-EEECCEEEEEecCC
Q 013929 269 VFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPN--MSPARGGAARGTEMPASAEAPPLV-AVVNNELYAADYAD 345 (433)
Q Consensus 269 ~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~--~p~~r~~~~~~~~~~~~~~~~~~~-~~~~~~ly~~gg~~ 345 (433)
..-+++.++.++.++. ....+..+|........... +....... .++ +.-++++++.|+..
T Consensus 227 fspdg~~l~~~s~d~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V-------------~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 227 FIADDTVLIAASLKKG---KGIVLTKISIKSGNTSVLRSKQVTNRFKGI-------------TSMDVDMKGELAVLASND 290 (365)
T ss_dssp EEETTEEEEEEEESSS---CCEEEEEEEEETTEEEEEEEEEEESSCSCE-------------EEEEECTTSCEEEEEETT
T ss_pred EcCCCCEEEEEecCCc---ceeEEeecccccceecceeeeeecCCCCCe-------------EeEEECCCCCceEEEcCC
Confidence 2357888888776532 22345667766665543321 11111110 011 12378888889889
Q ss_pred CeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 346 MEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 346 ~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+.|.+||.++.+- +..+... +...-.+++. .++++++.|+.++ .+.+|++.
T Consensus 291 ~~V~iwd~~~~~~--~~~~~~g---H~~~V~~v~fSpdg~~laS~S~D~------tvrvw~ip 342 (365)
T 4h5i_A 291 NSIALVKLKDLSM--SKIFKQA---HSFAITEVTISPDSTYVASVSAAN------TIHIIKLP 342 (365)
T ss_dssp SCEEEEETTTTEE--EEEETTS---SSSCEEEEEECTTSCEEEEEETTS------EEEEEECC
T ss_pred CEEEEEECCCCcE--EEEecCc---ccCCEEEEEECCCCCEEEEEeCCC------eEEEEEcC
Confidence 9999999988653 2221111 1111123333 4678888887633 47788763
No 259
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=86.50 E-value=20 Score=33.11 Aligned_cols=80 Identities=15% Similarity=0.266 Sum_probs=45.6
Q ss_pred CCEEEEEec----------CCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEe
Q 013929 335 NNELYAADY----------ADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSW 404 (433)
Q Consensus 335 ~~~ly~~gg----------~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~ 404 (433)
++++|+... ..+.|++||.++++ .+..++... . ++.++..-+.+||+.++ ..+.+|
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p---~~ia~spdg~~l~v~n~--------~~v~v~ 330 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-A---LSMTIDQQRNLMLTLDG--------GNVNVY 330 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-C---CEEEEETTTTEEEEECS--------SCEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-e---eEEEECCCCCEEEEeCC--------CeEEEE
Confidence 478998753 13589999998875 344333332 1 23444334556776653 236667
Q ss_pred ecCCCCCCceEeccc-CCCcEEEEEEE
Q 013929 405 VPSEGPPQWNLLARK-QSANFVYNCAV 430 (433)
Q Consensus 405 ~~~~~~~~W~~v~~~-p~~~~~~~~~v 430 (433)
+. .+.+-+.+..+ +.+..-+..++
T Consensus 331 D~--~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 331 DI--SQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp EC--SSSSCEEEEEETTSCSSEEEEEE
T ss_pred EC--CCCcceeeEEeccCCCCcEEEEe
Confidence 55 23222788775 56666555544
No 260
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.44 E-value=7.7 Score=39.74 Aligned_cols=57 Identities=11% Similarity=-0.006 Sum_probs=32.3
Q ss_pred CceEEEeCCCC---CeEEcCCCCCCCcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCCceEecCC
Q 013929 241 SSAEMYNSETQ---TWKVLPSMKNPRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPN 307 (433)
Q Consensus 241 ~~~~~yd~~t~---~W~~~~~~p~~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~ 307 (433)
..++++|..++ .-+.+.... ......+ .-+|+..+++.. ..++++|+.+++...+..
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SPDG~~la~~~~--------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSPKGGFVSFIRG--------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSS--SCEEEEEECTTSSEEEEEET--------TEEEEEETTTTEEEECCC
T ss_pred CcEEEEECCCCCcceEEEcccCC--cccccccCCCCCCEEEEEeC--------CcEEEEecCCCCEEEecc
Confidence 67999999887 443333221 1111122 235665444431 268999999887776643
No 261
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=86.30 E-value=22 Score=33.28 Aligned_cols=219 Identities=12% Similarity=0.116 Sum_probs=108.7
Q ss_pred EEEeeccceEEEEecCC--CcEEeCCCCCCccccccCCceEEEE---CCEEEEECCCCCCcccceeEEEEEcCCCceecC
Q 013929 134 VYFSCHLLEWEAFDPIR--RRWMHLPRMTSNECFMCSDKESLAV---GTELLVFGRELTAHHISHVIYRYSILTNSWSSG 208 (433)
Q Consensus 134 l~~~~~~~~~~~yd~~~--~~W~~l~~~p~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 208 (433)
|++.+. .-+..++... .+|..+.+...... -..++.. .+.||+.+.... .-.-+++.+..-.+|+.+
T Consensus 25 l~vgt~-~Gl~~~~~~~~g~~W~~~~~~~~~~~----v~~i~~dp~~~~~l~~g~~~g~---~g~gl~~s~D~G~tW~~~ 96 (394)
T 3b7f_A 25 LLVATI-KGAWFLASDPARRTWELRGPVFLGHT----IHHIVQDPREPERMLMAARTGH---LGPTVFRSDDGGGNWTEA 96 (394)
T ss_dssp EEEEET-TEEEEEEECTTSCSEEEEEEESTTSE----EEEEEECSSSTTCEEEEEEC-----CCEEEEEESSTTSCCEEC
T ss_pred EEEEec-CceEEEECCCCCCCceECCccCCCCc----eEEEEECCCCCCeEEEEecCCC---CCccEEEeCCCCCCceEC
Confidence 444433 2355566544 68987632111110 1122222 467887653200 112477777777899887
Q ss_pred CCC---CCC--c-------ceeeEEEe----CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCC---CC--------
Q 013929 209 MRM---NAP--R-------CLFGSASL----GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSM---KN-------- 261 (433)
Q Consensus 209 ~~~---p~~--r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---p~-------- 261 (433)
... +.. + ...+++.. .+.||+.+. ...+++.+-...+|+.+... |.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~ 169 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGE 169 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCcccccccccc
Confidence 532 211 1 11123332 467777542 23477777777889987432 21
Q ss_pred ------CCcceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEecCCC------CCCCCCCCCCCcCCCCcC
Q 013929 262 ------PRKMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNM------SPARGGAARGTEMPASAE 326 (433)
Q Consensus 262 ------~r~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~------p~~r~~~~~~~~~~~~~~ 326 (433)
....+.+++. .+.||+.... ..+++.+-...+|+.+... |...... ..
T Consensus 170 ~~g~~~~~~i~~i~~d~~~~~~l~vg~~~--------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~---------g~ 232 (394)
T 3b7f_A 170 QDGTPDGPKMHSILVDPRDPKHLYIGMSS--------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEF---------GH 232 (394)
T ss_dssp ----CCCCEEEEEEECTTCTTCEEEEEET--------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSS---------CB
T ss_pred ccCCCCCCceeEEEECCCCCCEEEEEECC--------CCEEEECCCCCCceECCCCccccccCCCcccc---------Cc
Confidence 1111222222 2567775332 1366677777899987531 1110000 00
Q ss_pred CCCEEEEE-C--CEEEEEecCCCeEEEEeCCCCcEEEecc-CCCcccCCCcccEEEEE---eCCEEEEEc
Q 013929 327 APPLVAVV-N--NELYAADYADMEVRKYDKERRLWFTIGR-LPERANSMNGWGLAFRA---CGDRLIVIG 389 (433)
Q Consensus 327 ~~~~~~~~-~--~~ly~~gg~~~~i~~yd~~~~~W~~v~~-lp~~~~~~~~~~~~~~~---~~~~l~v~G 389 (433)
....+++. + +.||+.. ...|++++....+|+.+.. +|.... .++..++. -.+.||+..
T Consensus 233 ~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~tW~~~~~~l~~~~~---~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQN--HCGIYRMDRREGVWKRIGDAMPREVG---DIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp CEEEEEECSSSTTEEEEEE--TTEEEEEETTTTEEECGGGGSCTTTC---SCEEEEEECSSCTTCEEEEE
T ss_pred ceeEEEECCCCCCEEEEEc--CCeEEEeCCCCCcceECCCCCCCCCc---cceEEEEECCCCCCEEEEEe
Confidence 00122332 1 6777753 4569999988999999863 554211 12234443 246788764
No 262
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.14 E-value=22 Score=33.29 Aligned_cols=105 Identities=9% Similarity=0.060 Sum_probs=58.7
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
++.+++.|+.+ ..+.+||..+.+-...-..+.....-..+.+ ++++++.|+.++ .+.+||+.+++
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-------~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-------IIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-------CEEEEETTTTE
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-------eEEEEEcCCcc
Confidence 46777777654 4588999988653221111101112222223 677777777663 47889998765
Q ss_pred eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--------CCEEEEEecCCCeEEEEeCCCCcE
Q 013929 302 WTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--------NNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 302 W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--------~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
....-..+.. . .+..+ ++.+++.|+..+.|.+||..+++-
T Consensus 248 ~~~~~~~~~~--~---------------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 248 LIRSWSFGDH--A---------------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EEEEEBCTTC--E---------------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred EEEEEecCCC--C---------------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 4321111110 0 11111 355777777788899999987763
No 263
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=85.70 E-value=24 Score=33.28 Aligned_cols=177 Identities=12% Similarity=0.139 Sum_probs=94.6
Q ss_pred Ccee--cCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC-----C-CeEEcCCC-CCCCcceeEEEECC
Q 013929 203 NSWS--SGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET-----Q-TWKVLPSM-KNPRKMCSGVFMDG 273 (433)
Q Consensus 203 ~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-----~-~W~~~~~~-p~~r~~~~~~~~~g 273 (433)
+.|+ .++..|..-.-|+.+.+++.=|++|-.+++-.+..--..|-+.. . .=+.++.- ...-...+.-.++|
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdg 349 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDG 349 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETT
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCC
Confidence 4464 45566766778899999888888887665532222222222211 1 12233321 11112234457899
Q ss_pred EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCC--------
Q 013929 274 KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYAD-------- 345 (433)
Q Consensus 274 ~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~-------- 345 (433)
.||+.-... .....-..+.+-+..-..|+.+. .|...... ....+..++.||+||...
T Consensus 350 vLyLtTRgt-~~~~~GS~L~rs~d~Gq~w~slr-fp~nvHht------------nlPFakvgD~l~mFgsERA~nEWE~G 415 (670)
T 3ju4_A 350 VLYLITRGT-RGDRLGSSLHRSRDIGQTWESLR-FPHNVHHT------------TLPFAKVGDDLIMFGSERAENEWEAG 415 (670)
T ss_dssp EEEEEEEES-CTTSCCCEEEEESSTTSSCEEEE-CTTCCCSS------------CCCEEEETTEEEEEEECSSTTCSSTT
T ss_pred EEEEEecCc-CCCCCcceeeeecccCCchhhee-cccccccc------------CCCcceeCCEEEEEeccccccccccC
Confidence 999996433 12234455667777777898874 22221110 013688999999998411
Q ss_pred ----------CeEEE-------EeCCCCcEEEecc-CCCcccCCCcccE-EEEEeCCEE-EEEcCCCC
Q 013929 346 ----------MEVRK-------YDKERRLWFTIGR-LPERANSMNGWGL-AFRACGDRL-IVIGGPKA 393 (433)
Q Consensus 346 ----------~~i~~-------yd~~~~~W~~v~~-lp~~~~~~~~~~~-~~~~~~~~l-~v~GG~~~ 393 (433)
-..+. |..+.-+|..+.. +-+...-.++.|. +++.-++.| |+|||++.
T Consensus 416 ~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~ 483 (670)
T 3ju4_A 416 APDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDH 483 (670)
T ss_dssp CCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCS
T ss_pred CCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCccc
Confidence 11111 3344557887752 2222211223444 344567766 58999753
No 264
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.05 E-value=23 Score=32.46 Aligned_cols=199 Identities=11% Similarity=-0.021 Sum_probs=98.4
Q ss_pred eEEEEecCCCcEEeCCCCCCccccccCCceEEEECC-EEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeE
Q 013929 142 EWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGT-ELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGS 220 (433)
Q Consensus 142 ~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~ 220 (433)
.++.+|+.+.+-..+...+..... ......++ .|+.... ...++++|+.+++-+.+...+........
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~----~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~ 129 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTF----GGFLSPDDDALFYVKD-------GRNLMRVDLATLEENVVYQVPAEWVGYGT 129 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSS----SCEECTTSSEEEEEET-------TTEEEEEETTTCCEEEEEECCTTEEEEEE
T ss_pred eEEEEeCCCCceEEeeeCCCCCcc----ceEEcCCCCEEEEEeC-------CCeEEEEECCCCcceeeeechhhcccccc
Confidence 588899988888777654432211 01122344 3443332 13689999998876655444443222222
Q ss_pred E--EeCCEEEEEcc---CCC-------------CCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEE-CCEEEEEccc
Q 013929 221 A--SLGEIAILAGG---SDL-------------EGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFM-DGKFYVIGGI 281 (433)
Q Consensus 221 ~--~~~~~iyv~GG---~~~-------------~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~lyv~GG~ 281 (433)
. .-+++.++.-- .+. .......++++|+.++.-+.+...+. ...+....- +|+..++...
T Consensus 130 ~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 130 WVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp EEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEEC
T ss_pred eeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEe
Confidence 1 22343333110 000 01123678999999887655542211 111222222 4554444332
Q ss_pred cCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCE-EEEEecC--C--CeEEEEeCCCC
Q 013929 282 GGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNE-LYAADYA--D--MEVRKYDKERR 356 (433)
Q Consensus 282 ~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~-ly~~gg~--~--~~i~~yd~~~~ 356 (433)
. ........++.+|+.+.....+.......... .....-+|+ |+.+... . ..|+.||+.++
T Consensus 209 ~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~-------------~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 209 G-PHDLVDARMWLINEDGTNMRKVKTHAEGESCT-------------HEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp S-CTTTSSCSEEEEETTSCCCEESCCCCTTEEEE-------------EEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred c-CCCCCcceEEEEeCCCCceEEeeeCCCCcccc-------------cceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 2 11122457899999887766664322110000 001112444 5444321 1 24999999999
Q ss_pred cEEEeccCCC
Q 013929 357 LWFTIGRLPE 366 (433)
Q Consensus 357 ~W~~v~~lp~ 366 (433)
+-+.+..++.
T Consensus 275 ~~~~l~~~~~ 284 (388)
T 3pe7_A 275 ENRQLTSMPA 284 (388)
T ss_dssp CEEEEEEECC
T ss_pred ceEEEEcCCC
Confidence 8777765543
No 265
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=84.91 E-value=22 Score=32.05 Aligned_cols=103 Identities=9% Similarity=-0.074 Sum_probs=54.2
Q ss_pred ceeEEEEEcCCCce-ecCCCCCCCcceeeEEEeCCEEEEEccCCCCCC--c-CCceEEEeCCCCCeEEcCCCCCCCccee
Q 013929 192 SHVIYRYSILTNSW-SSGMRMNAPRCLFGSASLGEIAILAGGSDLEGN--I-LSSAEMYNSETQTWKVLPSMKNPRKMCS 267 (433)
Q Consensus 192 ~~~~~~yd~~t~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~-~~~~~~yd~~t~~W~~~~~~p~~r~~~~ 267 (433)
...++++|..+++. +.+.. + ........-++ +++.+..+.... . ...++.+| ++.++.+..- ....
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~ 220 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFY 220 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEE
T ss_pred cceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----ccee
Confidence 35689999998887 55544 2 22222223355 555554332211 2 45788888 6667665432 1222
Q ss_pred EEEECCEEEEEccccCC-CCcccceEEEEECCCCceEecC
Q 013929 268 GVFMDGKFYVIGGIGGS-DSKVLTCGEEYDLETETWTEIP 306 (433)
Q Consensus 268 ~~~~~g~lyv~GG~~~~-~~~~~~~v~~yd~~t~~W~~~~ 306 (433)
...-+|+.+++.+.... .......++.+| ++++..+.
T Consensus 221 ~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 221 AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred eECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 22456664444443211 111245688888 66676654
No 266
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=84.90 E-value=36 Score=34.63 Aligned_cols=186 Identities=10% Similarity=-0.019 Sum_probs=92.2
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCC----------CCcCCceEEEeCCCCCeE--EcCCC
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLE----------GNILSSAEMYNSETQTWK--VLPSM 259 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----------~~~~~~~~~yd~~t~~W~--~~~~~ 259 (433)
..++++|..+++...... +... ....+.. +++-++++..+.. ......+++++..+..-+ .+...
T Consensus 151 ~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp EEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 369999999998765311 1111 1122222 4443333333221 022456888898887532 22122
Q ss_pred C-CCCcceeEE-EECCEEEEEccccCCCCcccceEEEEECCC------C--ceEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 260 K-NPRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLET------E--TWTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 260 p-~~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t------~--~W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
+ .+....... .-+|+..++....+. .....++.+|+.+ . .+..+.........
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~--------------- 291 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGC--DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD--------------- 291 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSS--SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE---------------
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccC--CCccEEEEEECcccccccCCccceEEeeCCCCcEEE---------------
Confidence 2 122222222 235654444433211 1146788999876 4 57666432111111
Q ss_pred EEEEECCEEEEEecC---CCeEEEEeCCCC---cEEEeccCCCcccCCCcccEEEEEe-CCEEEEEcCCCCCCCCeeEEE
Q 013929 330 LVAVVNNELYAADYA---DMEVRKYDKERR---LWFTIGRLPERANSMNGWGLAFRAC-GDRLIVIGGPKASGEGFIELN 402 (433)
Q Consensus 330 ~~~~~~~~ly~~gg~---~~~i~~yd~~~~---~W~~v~~lp~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~ 402 (433)
.....++.||+.+.. ...|+.+|..+. .|+.+.+-..... -..+... +++|++.... .+...+.
T Consensus 292 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~lv~~~~~----~g~~~l~ 362 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDV-----LEWVACVRSNFLVLCYLH----DVKNTLQ 362 (710)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-----EEEEEEETTTEEEEEEEE----TTEEEEE
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCe-----EEEEEEEcCCEEEEEEEE----CCEEEEE
Confidence 233346788887642 357999999876 5888753222110 0223344 6777776643 2334455
Q ss_pred Eeec
Q 013929 403 SWVP 406 (433)
Q Consensus 403 ~~~~ 406 (433)
+|++
T Consensus 363 ~~~~ 366 (710)
T 2xdw_A 363 LHDL 366 (710)
T ss_dssp EEET
T ss_pred EEEC
Confidence 5555
No 267
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=84.02 E-value=15 Score=36.42 Aligned_cols=96 Identities=14% Similarity=0.066 Sum_probs=51.0
Q ss_pred CceEEEeC--CCCCeEEcCCCCCCCcceeEEEECC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCC
Q 013929 241 SSAEMYNS--ETQTWKVLPSMKNPRKMCSGVFMDG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAAR 317 (433)
Q Consensus 241 ~~~~~yd~--~t~~W~~~~~~p~~r~~~~~~~~~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~ 317 (433)
..++..+. .... ..+...+..+ ..+...+| .++++.+..+ .+.+||+.+++-+.+...+. ..
T Consensus 90 ~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~~-------~~~l~d~~~g~~~~l~~~~~--~~--- 154 (582)
T 3o4h_A 90 HALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATED-------RVALYALDGGGLRELARLPG--FG--- 154 (582)
T ss_dssp EEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECSS-------CEEEEEEETTEEEEEEEESS--CE---
T ss_pred eEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCCC-------CceEEEccCCcEEEeecCCC--ce---
Confidence 45777777 4332 2333322222 22334454 4555544331 13478888887666643222 11
Q ss_pred CCcCCCCcCCCCEEEEECCEEEEEecC----CCeEEEEeCCCCcEEEecc
Q 013929 318 GTEMPASAEAPPLVAVVNNELYAADYA----DMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~ly~~gg~----~~~i~~yd~~~~~W~~v~~ 363 (433)
....-+|+..+++.. ...|+.+|..+++++.+..
T Consensus 155 ------------~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 155 ------------FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp ------------EEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred ------------EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 234456655554322 2579999999999887753
No 268
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.92 E-value=21 Score=31.37 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=54.2
Q ss_pred CceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCC
Q 013929 241 SSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARG 318 (433)
Q Consensus 241 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~ 318 (433)
..+.++|..+++-...-........-.++. -+++.++.|+.++ .+.+||..+++-...-..... .
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg-------~v~iw~~~~~~~~~~~~~h~~--~---- 111 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLRNMTSHSA--R---- 111 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-------EEEEEETTTTEEEEEEECCSS--C----
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC-------cEEEeecCCceeEEEecCccc--e----
Confidence 458889999887654332222221112222 3677778887662 478899988764322111111 1
Q ss_pred CcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcE
Q 013929 319 TEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
......++.+.+.|+..+.+..++..+...
T Consensus 112 ----------~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 112 ----------VGSLSWNSYILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp ----------EEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred ----------EEEeecCCCEEEEEecCCceEeeecCCCce
Confidence 123445566777777778888888776543
No 269
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=83.82 E-value=14 Score=35.04 Aligned_cols=22 Identities=14% Similarity=0.311 Sum_probs=18.5
Q ss_pred CCEEEEEecCCCeEEEEeCCCC
Q 013929 335 NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
++.+++.++..+.|.+||..+.
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCS
T ss_pred CCCEEEEEeCCCeEEEEECCCC
Confidence 5678888888899999999875
No 270
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=83.70 E-value=12 Score=38.22 Aligned_cols=143 Identities=10% Similarity=0.048 Sum_probs=81.2
Q ss_pred eeEEEEEcCCC--ceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCC---CeEEcCCCCCCCccee
Q 013929 193 HVIYRYSILTN--SWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQ---TWKVLPSMKNPRKMCS 267 (433)
Q Consensus 193 ~~~~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~r~~~~ 267 (433)
+.++++|..+. +|+.+..-..... ......++.||+....+. ....++.+|+.+. .|+.+.+-.... ..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~~ 332 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLIPERQQV--LT 332 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSSC--EE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEecCCCCE--EE
Confidence 57888887665 5666543222211 123445789988865432 2457899998874 388754332222 24
Q ss_pred EEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-----CCEEEEEe
Q 013929 268 GVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-----NNELYAAD 342 (433)
Q Consensus 268 ~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~ly~~g 342 (433)
....++.|++....+ ....++++|+.....+.++ +|.. + .+..+ ++.+++..
T Consensus 333 ~s~~g~~lv~~~~~~-----g~~~l~~~d~~g~~~~~l~-~p~~--~---------------~~~~~~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVD-----ATARVEQFDYEGKRVREVA-LPGL--G---------------SVSGFNGKHDDPALYFGF 389 (693)
T ss_dssp EEEETTEEEEEEEET-----TEEEEEEECTTSCEEEEEC-CSSS--S---------------EEEECCCCTTCSCEEEEE
T ss_pred EEEECCEEEEEEEEC-----CeeEEEEEECCCCeeEEee-cCCC--c---------------eEEeeecCCCCCEEEEEe
Confidence 445566666654333 2356888998876555553 2221 1 11111 23444432
Q ss_pred -c--CCCeEEEEeCCCCcEEEeccC
Q 013929 343 -Y--ADMEVRKYDKERRLWFTIGRL 364 (433)
Q Consensus 343 -g--~~~~i~~yd~~~~~W~~v~~l 364 (433)
+ ....++.||..+++++.+...
T Consensus 390 ss~~tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 390 ENYAQPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp ECSSSCCEEEEECTTTCCEEEEECC
T ss_pred cCCCCCCEEEEEECCCCeEEEEEeC
Confidence 2 237899999999988877643
No 271
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=83.70 E-value=34 Score=33.40 Aligned_cols=214 Identities=13% Similarity=0.013 Sum_probs=101.7
Q ss_pred cEEEEeecc-ceEEEEecCCCcEEeCCCCCCccccccCCceEEE--------E-CCEEEEECCCCCCcccceeEEEEEcC
Q 013929 132 HWVYFSCHL-LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA--------V-GTELLVFGRELTAHHISHVIYRYSIL 201 (433)
Q Consensus 132 ~~l~~~~~~-~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~--------~-~~~iyv~GG~~~~~~~~~~~~~yd~~ 201 (433)
.-||++... ..+.+.|+..+.-..+....... ......++. . ++.||+.--..........+++++..
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~--~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~ 229 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIP--TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRN 229 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSS--CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECC
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccc--cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecC
Confidence 446665443 56888999998888775543211 101122222 1 34588874321110123458888865
Q ss_pred C-CceecCC---CCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCC-------CCC-eEE-----------c
Q 013929 202 T-NSWSSGM---RMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSE-------TQT-WKV-----------L 256 (433)
Q Consensus 202 t-~~W~~~~---~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~-------t~~-W~~-----------~ 256 (433)
. ++|...+ .++.-...+.++.. ++.||+.-- ....+++||+. +.+ |+. +
T Consensus 230 ~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~------~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l 303 (496)
T 3kya_A 230 ADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY------EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQL 303 (496)
T ss_dssp TTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET------TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEE
T ss_pred CCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC------CCCEEEEEecccccccccCceeeccccccccccccee
Confidence 5 4664201 11111223444444 468888732 23469999997 443 432 2
Q ss_pred CCCCCCCcceeEEEE-CCE-EEEEccccCCCCcccceEEE--EECCCCce---EecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 257 PSMKNPRKMCSGVFM-DGK-FYVIGGIGGSDSKVLTCGEE--YDLETETW---TEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 257 ~~~p~~r~~~~~~~~-~g~-lyv~GG~~~~~~~~~~~v~~--yd~~t~~W---~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
...+.....+.+++. +|+ ||+.- ...+.|++ +|..+... +.+...+ ...+..-+....+.-..+.
T Consensus 304 ~~~~~~~~p~~ia~~p~G~~lYvaD-------~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 304 FTIADPSWEFQIFIHPTGKYAYFGV-------INNHYFMRSDYDEIKKEFITPYNFVGGY-KQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp EECSSSSCCEEEEECTTSSEEEEEE-------TTTTEEEEEEEETTTTEECCCEEEEEBT-TBCCCBCCBGGGCBCSSEE
T ss_pred EecCCCCCceEEEEcCCCCEEEEEe-------CCCCEEEEEecCCCcceecccEEecCCC-CCCcccCCcccccccCCCe
Confidence 122222222334432 454 78872 12345666 45555433 1111110 0011000000001111122
Q ss_pred -EEEEE--------CCEEEEEecCCCeEEEEeCCCCcEEEec
Q 013929 330 -LVAVV--------NNELYAADYADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 330 -~~~~~--------~~~ly~~gg~~~~i~~yd~~~~~W~~v~ 362 (433)
.+++. ++.||+.......|.++++ ++.-+.+.
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~Tia 416 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYA 416 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEE
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEe
Confidence 23442 4799999888889999996 44555553
No 272
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=83.27 E-value=27 Score=31.78 Aligned_cols=150 Identities=11% Similarity=0.081 Sum_probs=76.3
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCC-CCCCc-ceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMR-MNAPR-CLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
.+.+|+.|.. ..++.-.-.-.+|+.+.. .+.+. ....+...++.+|++|.. ..+++-+=.-.+|
T Consensus 46 ~~~~~~~G~~-------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW 111 (327)
T 2xbg_A 46 RHHGWLVGVN-------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSW 111 (327)
T ss_dssp SSCEEEEETT-------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSC
T ss_pred CCcEEEEcCC-------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCc
Confidence 4577876632 124443333458998753 22222 233444556788887521 1233322224689
Q ss_pred EEcCCCC-CCCcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEE
Q 013929 254 KVLPSMK-NPRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLV 331 (433)
Q Consensus 254 ~~~~~~p-~~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~ 331 (433)
+.+.... .+-....++ .-++.+|+.|... .+++-+-.-.+|+.+...... ... .+
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g--------~v~~S~DgG~tW~~~~~~~~~-~~~--------------~~ 168 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEMITNVG--------AIYRTKDSGKNWQALVQEAIG-VMR--------------NL 168 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEEEETTC--------CEEEESSTTSSEEEEECSCCC-CEE--------------EE
T ss_pred eECccccCCCCCeEEEEEECCCCEEEEeCCc--------cEEEEcCCCCCCEEeecCCCc-ceE--------------EE
Confidence 9986432 122223333 3468888876421 133332234579988542211 111 22
Q ss_pred EEE-CCEEEEEecCCCeEEEEeCC-CCcEEEecc
Q 013929 332 AVV-NNELYAADYADMEVRKYDKE-RRLWFTIGR 363 (433)
Q Consensus 332 ~~~-~~~ly~~gg~~~~i~~yd~~-~~~W~~v~~ 363 (433)
+.. ++.++++| ..+.++.-+-. ...|+.+..
T Consensus 169 ~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 169 NRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp EECTTSCEEEEE-TTSSEEEEECTTCSSCEEEEC
T ss_pred EEcCCCcEEEEE-CCCcEEEEeCCCCCceeECCC
Confidence 222 56677665 34556665433 678998853
No 273
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=82.98 E-value=38 Score=33.35 Aligned_cols=138 Identities=9% Similarity=0.000 Sum_probs=72.5
Q ss_pred eeEEEEEc--CCCceecCCCCCCCcceeeEEEeCC-EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEE
Q 013929 193 HVIYRYSI--LTNSWSSGMRMNAPRCLFGSASLGE-IAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGV 269 (433)
Q Consensus 193 ~~~~~yd~--~t~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~ 269 (433)
..+|..+. .... ..+...+..+ ......++ .++++.+.. ..+.+||+.++.-+.+...+. .....
T Consensus 90 ~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~------~~~~l~d~~~g~~~~l~~~~~---~~~~~ 157 (582)
T 3o4h_A 90 HALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATE------DRVALYALDGGGLRELARLPG---FGFVS 157 (582)
T ss_dssp EEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECS------SCEEEEEEETTEEEEEEEESS---CEEEE
T ss_pred eEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCC------CCceEEEccCCcEEEeecCCC---ceEEE
Confidence 35777777 3332 2333322222 22333443 455554432 223478988887666654332 22233
Q ss_pred EECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCC--e
Q 013929 270 FMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADM--E 347 (433)
Q Consensus 270 ~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~--~ 347 (433)
.-+|+..++++.+.. ....++.+|+.+++++.+......... ....-||+.++.+...+ .
T Consensus 158 spDG~~la~~~~~~~---~~~~i~~~d~~~g~~~~l~~~~~~~~~---------------~~~SpDG~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGG---GRVSLFTSNLSSGGLRVFDSGEGSFSS---------------ASISPGMKVTAGLETAREAR 219 (582)
T ss_dssp EEETTEEEEEEEEET---TEEEEEEEETTTCCCEEECCSSCEEEE---------------EEECTTSCEEEEEECSSCEE
T ss_pred CCCCCEEEEEEEcCC---CCeEEEEEcCCCCCceEeecCCCcccc---------------ceECCCCCEEEEccCCCeeE
Confidence 356766665554311 124589999999988876532211111 11222555444444444 7
Q ss_pred EEEEeCCCCcEEE
Q 013929 348 VRKYDKERRLWFT 360 (433)
Q Consensus 348 i~~yd~~~~~W~~ 360 (433)
|+.||.++++.+.
T Consensus 220 i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 220 LVTVDPRDGSVED 232 (582)
T ss_dssp EEEECTTTCCEEE
T ss_pred EEEEcCCCCcEEE
Confidence 9999999888773
No 274
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=82.44 E-value=32 Score=32.06 Aligned_cols=79 Identities=11% Similarity=-0.028 Sum_probs=41.2
Q ss_pred CCEEEEEec---------CCCeEEEEeCCCCcE-EEeccCCCcccCCCcccEEEEEeCC-EEEEEcCCCCCCCCeeEEEE
Q 013929 335 NNELYAADY---------ADMEVRKYDKERRLW-FTIGRLPERANSMNGWGLAFRACGD-RLIVIGGPKASGEGFIELNS 403 (433)
Q Consensus 335 ~~~ly~~gg---------~~~~i~~yd~~~~~W-~~v~~lp~~~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~ 403 (433)
++++|+... ..+.|+++|.++++- ..+ +++... ++.++..-+. .+|+..... ..+.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~~p-----~~i~~s~Dg~~~l~v~~~~~------~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDV-----DAISVAQDGGPDLYALSAGT------EVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCCCc-----CeEEECCCCCeEEEEEcCCC------CeEEE
Confidence 478999742 135899999987754 233 233322 2344333334 355544221 23555
Q ss_pred eecCCCCCCceEecc-cCCCcEEEEEE
Q 013929 404 WVPSEGPPQWNLLAR-KQSANFVYNCA 429 (433)
Q Consensus 404 ~~~~~~~~~W~~v~~-~p~~~~~~~~~ 429 (433)
++. .+++.+.. .+.+..-+...
T Consensus 346 iD~----~t~~vv~~i~~vG~~P~~~~ 368 (373)
T 2mad_H 346 YDA----GAGDQDQSTVELGSGPQVLS 368 (373)
T ss_pred EEC----CCCCEEeeecCCCCCCcEEE
Confidence 555 44666666 45555544433
No 275
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=82.30 E-value=22 Score=34.11 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=42.1
Q ss_pred CCEEEEEccccC--CCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-C-C-EEEEEecCCC
Q 013929 272 DGKFYVIGGIGG--SDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV-N-N-ELYAADYADM 346 (433)
Q Consensus 272 ~g~lyv~GG~~~--~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~-~-~ly~~gg~~~ 346 (433)
++++|+.-...+ .....-+.+.++|+.+.+= +..++.+..-. ++++. + . .+|+.....+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~vg~~P~--------------gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIELGHEID--------------SINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEEEEEC--------------EEEECCSSSCEEEEEETTTT
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEECCCCcC--------------eEEEccCCCEEEEEEcCCCC
Confidence 478998743211 1112346799999988753 22222222111 23333 3 4 6787776789
Q ss_pred eEEEEeCCCCcEE
Q 013929 347 EVRKYDKERRLWF 359 (433)
Q Consensus 347 ~i~~yd~~~~~W~ 359 (433)
.|.++|..+.+-.
T Consensus 394 ~VsVID~~t~kvv 406 (426)
T 3c75_H 394 TLHIYDAATGEEL 406 (426)
T ss_dssp EEEEEETTTCCEE
T ss_pred eEEEEECCCCCEE
Confidence 9999998876543
No 276
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=82.21 E-value=32 Score=32.03 Aligned_cols=236 Identities=12% Similarity=0.065 Sum_probs=115.2
Q ss_pred eEEEEecCCCcEEeCCCC---CCcccc----c-cCCceEEEE----CCEEEEECCCCCCcccceeEEEEEcCCCceecCC
Q 013929 142 EWEAFDPIRRRWMHLPRM---TSNECF----M-CSDKESLAV----GTELLVFGRELTAHHISHVIYRYSILTNSWSSGM 209 (433)
Q Consensus 142 ~~~~yd~~~~~W~~l~~~---p~~~~~----~-~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 209 (433)
-++..+....+|..+... +..... . ..-..++.. .+.||+.+. ..-+++.+-...+|+.+.
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECc
Confidence 456666667899887632 111000 0 000112222 467777542 124788877778998774
Q ss_pred CC---CC--------------CcceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCC------CCC-
Q 013929 210 RM---NA--------------PRCLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSM------KNP- 262 (433)
Q Consensus 210 ~~---p~--------------~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~------p~~- 262 (433)
.+ |. ....+.++.. .+.||+.... ..+++.+-...+|+.+..- |.+
T Consensus 155 ~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~ 227 (394)
T 3b7f_A 155 GFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPN 227 (394)
T ss_dssp HHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSS
T ss_pred CccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCc
Confidence 31 21 1122334333 3567776321 2367777777889987531 211
Q ss_pred ----CcceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEecCC-CCCCCCCCCCCCcCCCCcCCCCEEEE-
Q 013929 263 ----RKMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPN-MSPARGGAARGTEMPASAEAPPLVAV- 333 (433)
Q Consensus 263 ----r~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~-~p~~r~~~~~~~~~~~~~~~~~~~~~- 333 (433)
...+.++.. .+.||+... ..+++++-...+|+.+.. ++...... ...+++
T Consensus 228 ~~~g~~~~~i~~~~~~~~~l~vg~~---------~gl~~s~D~G~tW~~~~~~l~~~~~~~------------~~~i~~~ 286 (394)
T 3b7f_A 228 VEFGHDPHCVVQHPAAPDILYQQNH---------CGIYRMDRREGVWKRIGDAMPREVGDI------------GFPIVVH 286 (394)
T ss_dssp SSSCBCEEEEEECSSSTTEEEEEET---------TEEEEEETTTTEEECGGGGSCTTTCSC------------EEEEEEC
T ss_pred cccCcceeEEEECCCCCCEEEEEcC---------CeEEEeCCCCCcceECCCCCCCCCccc------------eEEEEEC
Confidence 112233332 166776421 236778888889998853 43311010 012333
Q ss_pred --ECCEEEEEec------------CCCeEEEEeCCCCcEEEec-cCCCcccCCCcccEEEEE--eC-CEEEEEcCCCCCC
Q 013929 334 --VNNELYAADY------------ADMEVRKYDKERRLWFTIG-RLPERANSMNGWGLAFRA--CG-DRLIVIGGPKASG 395 (433)
Q Consensus 334 --~~~~ly~~gg------------~~~~i~~yd~~~~~W~~v~-~lp~~~~~~~~~~~~~~~--~~-~~l~v~GG~~~~~ 395 (433)
-.+.||+... ....+++-.-...+|+.+. .+|...........+++. .+ +.||+ |+...
T Consensus 287 p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~-g~~~g-- 363 (394)
T 3b7f_A 287 QRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYF-GTTGG-- 363 (394)
T ss_dssp SSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEE-ECTTS--
T ss_pred CCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEE-EeCCC--
Confidence 2467888631 1123444333346899986 455432110000122322 23 45665 43211
Q ss_pred CCeeEEEEeecCCCCCCceEec-ccCC
Q 013929 396 EGFIELNSWVPSEGPPQWNLLA-RKQS 421 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~W~~v~-~~p~ 421 (433)
.+|.-.....+|+.+. .+|.
T Consensus 364 ------~l~~S~D~G~tW~~~~~~lp~ 384 (394)
T 3b7f_A 364 ------EIWASADEGEHWQCIASHLPH 384 (394)
T ss_dssp ------CEEEESSTTSBCEEEECSCSC
T ss_pred ------eEEEECCCCCCceEcccCCCC
Confidence 1444444567899886 4554
No 277
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=82.04 E-value=23 Score=31.71 Aligned_cols=149 Identities=10% Similarity=0.038 Sum_probs=72.0
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
++..++.|+.+ ..+.+||..++.-.. .+......-..+. -++.+++.|+.++ .+.+||+....
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~-------~i~vwd~~~~~ 140 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDK-------TIKVWTIKGQC 140 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTS-------CEEEEETTSCE
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCC-------eEEEEECCCCe
Confidence 55666666654 458889988875311 1111111111222 2566777777663 36778886554
Q ss_pred eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-
Q 013929 302 WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRA- 380 (433)
Q Consensus 302 W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~- 380 (433)
-..+.......... ...+......++.+++.++..+.|..||..+.+-.. .+..... .-.+++.
T Consensus 141 ~~~~~~h~~~v~~~---------~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~h~~----~v~~~~~s 205 (319)
T 3frx_A 141 LATLLGHNDWVSQV---------RVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA--DFIGHNS----NINTLTAS 205 (319)
T ss_dssp EEEECCCSSCEEEE---------EECCC------CCEEEEEETTSCEEEEETTTTEEEE--EECCCCS----CEEEEEEC
T ss_pred EEEEeccCCcEEEE---------EEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe--eecCCCC----cEEEEEEc
Confidence 33332111000000 000000011134466777888999999998765322 1211111 1122322
Q ss_pred eCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 381 CGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 381 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
.++++++.||.+. .+.+|+...
T Consensus 206 p~g~~l~s~~~dg------~i~iwd~~~ 227 (319)
T 3frx_A 206 PDGTLIASAGKDG------EIMLWNLAA 227 (319)
T ss_dssp TTSSEEEEEETTC------EEEEEETTT
T ss_pred CCCCEEEEEeCCC------eEEEEECCC
Confidence 3567777777532 467777743
No 278
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=82.01 E-value=9.9 Score=38.87 Aligned_cols=147 Identities=6% Similarity=-0.012 Sum_probs=78.6
Q ss_pred ceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC---eEEcCCCCCCCcceeE
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT---WKVLPSMKNPRKMCSG 268 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~p~~r~~~~~ 268 (433)
...++++|..+++|+.+..-.... ...+..++.+|+....+ .....++++|..+.. |+.+.+......-...
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG---APRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT---CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC---CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 456888887777887765322211 22222455666654332 124678999987765 8776432212222234
Q ss_pred EEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECC-EEEEEe-c--C
Q 013929 269 VFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNN-ELYAAD-Y--A 344 (433)
Q Consensus 269 ~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~-~ly~~g-g--~ 344 (433)
...++.+++....+ ....++.+|+....-..+. .+...... . ....-++ .+++.. + .
T Consensus 326 ~~~~~~lv~~~~~d-----g~~~l~~~~~~g~~~~~l~-~~~~~~v~-----~--------~~~s~d~~~l~~~~ss~~~ 386 (695)
T 2bkl_A 326 SIVGGHLSLEYLKD-----ATSEVRVATLKGKPVRTVQ-LPGVGAAS-----N--------LMGLEDLDDAYYVFTSFTT 386 (695)
T ss_dssp EEETTEEEEEEEET-----TEEEEEEEETTCCEEEECC-CSSSSEEC-----C--------CBSCTTCSEEEEEEEETTE
T ss_pred EEECCEEEEEEEEC-----CEEEEEEEeCCCCeeEEec-CCCCeEEE-----E--------eecCCCCCEEEEEEcCCCC
Confidence 44588888876554 2356788887654444443 22111000 0 0001133 444432 2 2
Q ss_pred CCeEEEEeCCCCcEEEec
Q 013929 345 DMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 345 ~~~i~~yd~~~~~W~~v~ 362 (433)
...++.||..+++.+.+.
T Consensus 387 P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 387 PRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCcEEEEe
Confidence 357999999998877665
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=81.31 E-value=5.2 Score=38.45 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=63.1
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCE-EEEEccccCCCCcccceEEEEECCCCc
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGK-FYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~-lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
++.||+.-- . ..+.++|+.++..+.+.. ........++ -+|+ ||+.....+ .....+..++.. +.
T Consensus 149 ~g~Lyv~d~------~-~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~---~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 149 HNHLYLVGE------Q-HPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNN---NDRPNNYILTRE-SG 215 (430)
T ss_dssp EEEEEEEEB------T-EEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSC---TTSEEEEEEEGG-GT
T ss_pred CCeEEEEeC------C-CcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCC---cccceEEEEeCC-Cc
Confidence 478999832 1 678999999988776643 1111122222 2344 888854321 122345566653 33
Q ss_pred eE---ecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEeccC
Q 013929 302 WT---EIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLWFTIGRL 364 (433)
Q Consensus 302 W~---~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~~l 364 (433)
|. .++.+..+ ..+++. ++.||+.....+.|++||+.+..-..+..+
T Consensus 216 ~~~~~~l~~~~~p-----------------~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 216 FKVITELTKGQNC-----------------NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp SCSEEEEEECSSC-----------------CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred eeeeeeeccCCCc-----------------eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc
Confidence 32 22211111 134443 689999987778999999998765444333
No 280
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=81.15 E-value=20 Score=30.86 Aligned_cols=135 Identities=13% Similarity=0.136 Sum_probs=71.0
Q ss_pred ECCEEEEECCCCCCcccceeEEEEEcCCCce--ecC----CCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeC
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYSILTNSW--SSG----MRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNS 248 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 248 (433)
.++++|+|-|. .+|+++.....+ ..+ +.+|.. .. ++...++++|+|-| +..|+|+.
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgLP~~-ID-AA~~~~~~~yfFkG--------~~yw~~~~ 88 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPST-VD-AAFSWEDKLYLIQD--------TKVYVFLT 88 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTSCSS-CS-EEEEETTEEEEEET--------TEEEEEEC
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCCCCC-cc-EEEEECCcEEEecC--------CEEEEEeC
Confidence 47889999764 367766543221 011 223322 22 23334899999954 45788886
Q ss_pred CCCCeEEcC----------CCCCC--CcceeEEE---ECCEEEEEccccCCCCcccceEEEEECCCC---ceEecCCCCC
Q 013929 249 ETQTWKVLP----------SMKNP--RKMCSGVF---MDGKFYVIGGIGGSDSKVLTCGEEYDLETE---TWTEIPNMSP 310 (433)
Q Consensus 249 ~t~~W~~~~----------~~p~~--r~~~~~~~---~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~---~W~~~~~~p~ 310 (433)
.++ .+..+ .+|.. ...--+|+ .++++|+|-|.. .+.||..+. .|...+.+|.
T Consensus 89 ~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~~---------ywr~d~~~~P~~i~~~~~g~p~ 158 (219)
T 1hxn_A 89 KGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGRR---------LWWLDLKSGAQATWTELPWPHE 158 (219)
T ss_dssp SSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETTE---------EEEEEGGGGGGCCCEEECCSCS
T ss_pred CCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCCE---------EEEEeCCCCceEhhhcCCCCCC
Confidence 532 11111 12222 11223333 268999996643 588886542 3433332222
Q ss_pred CCCCCCCCCcCCCCcCCCCEEEE------------ECCEEEEEecCCCeEEEEeCCC
Q 013929 311 ARGGAARGTEMPASAEAPPLVAV------------VNNELYAADYADMEVRKYDKER 355 (433)
Q Consensus 311 ~r~~~~~~~~~~~~~~~~~~~~~------------~~~~ly~~gg~~~~i~~yd~~~ 355 (433)
... ++.. .++.+|++-| +..++||..+
T Consensus 159 ~vd----------------Aa~~~~~~~~~~~~~~~~~~~YFFkg--~~y~r~~~~~ 197 (219)
T 1hxn_A 159 KVD----------------GALCMEKPLGPNSCSTSGPNLYLIHG--PNLYCYRHVD 197 (219)
T ss_dssp CCS----------------EEEEESSCSSSCCSCSSSCEEEEEET--TEEEEESSHH
T ss_pred CcC----------------EEEEccccccccceeccCCeEEEEEC--CEEEEEeCCc
Confidence 111 2333 3467999854 6788887644
No 281
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=81.14 E-value=34 Score=31.50 Aligned_cols=233 Identities=11% Similarity=0.085 Sum_probs=110.3
Q ss_pred EEEEee-ccceEEEEecCCCcEEeCCCCCCc-----cccccCCceEEE----ECCEEEEECC---CCC----CcccceeE
Q 013929 133 WVYFSC-HLLEWEAFDPIRRRWMHLPRMTSN-----ECFMCSDKESLA----VGTELLVFGR---ELT----AHHISHVI 195 (433)
Q Consensus 133 ~l~~~~-~~~~~~~yd~~~~~W~~l~~~p~~-----~~~~~~~~~~~~----~~~~iyv~GG---~~~----~~~~~~~~ 195 (433)
.||++. ....+..+|+..+.=..+ ..+.. ...+. .++.. -.++|+++.- ... .....+.+
T Consensus 26 ~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~--sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v 102 (334)
T 2p9w_A 26 VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQM--SGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSF 102 (334)
T ss_dssp EEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEE--EEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEE
T ss_pred EEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCccee--eEEEEeccCCCCcEEEEEcccccccccccccCCCCEE
Confidence 455554 456788999986654444 23321 11111 12333 2468887521 110 01124569
Q ss_pred EEEEcC---CCc--eec-CCCCCCC-------cce-eeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC---eEEc
Q 013929 196 YRYSIL---TNS--WSS-GMRMNAP-------RCL-FGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT---WKVL 256 (433)
Q Consensus 196 ~~yd~~---t~~--W~~-~~~~p~~-------r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~ 256 (433)
.+||+. |++ |.. ++..... +.. ..=.++ +|.+||.+.+. ...++++++.... |-.-
T Consensus 103 ~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-----~~~I~rV~pdG~~~~~~~~~ 177 (334)
T 2p9w_A 103 HSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-----MPAIARVSADGKTVSTFAWE 177 (334)
T ss_dssp EEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-----SCEEEEECTTSCCEEEEEEC
T ss_pred EEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-----CCeEEEEeCCCCEEeeeeec
Confidence 999988 553 431 2111110 111 211222 67999975432 1568899987542 5433
Q ss_pred CCCCCCCcce-eEEEE-CC-EEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCE--E
Q 013929 257 PSMKNPRKMC-SGVFM-DG-KFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPL--V 331 (433)
Q Consensus 257 ~~~p~~r~~~-~~~~~-~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~--~ 331 (433)
.+....+.+. +.+.. +| .|++..+ . ..+++||+.+.... .++..|.+.. .. . ..+.. .
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-------g~L~~fD~~~pv~~---~v~~~~~G~~-~~-~----~~~dgilp 240 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGG-P-------RALTAFDVSKPYAW---PEPVKINGDF-GT-L----SGTEKIVT 240 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESS-S-------SSEEEEECSSSSCC---CEECEESSCC-CC-C----TTEEEEEE
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcC-C-------CeEEEEcCCCCcce---eecccccCCc-cc-c----cCcccccc
Confidence 3223334444 45555 35 5566543 3 35788998742210 1221110100 00 0 00012 2
Q ss_pred EEECCEEEEEecCCCeEEEEeCCCCcEEEec---cCCCcccCCCcccEEEEE---eCCEEEEEcCCC
Q 013929 332 AVVNNELYAADYADMEVRKYDKERRLWFTIG---RLPERANSMNGWGLAFRA---CGDRLIVIGGPK 392 (433)
Q Consensus 332 ~~~~~~ly~~gg~~~~i~~yd~~~~~W~~v~---~lp~~~~~~~~~~~~~~~---~~~~l~v~GG~~ 392 (433)
...+|++.++....+.++.+-...+ |+... ..|.... ..+...+.+. .+++||++.+.-
T Consensus 241 ~~~~G~vllV~~~~~~~~~l~S~Dg-W~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 241 VPVGNESVLVGARAPYAISFRSWDN-WKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEETTEEEEEEEETTEEEEEECSST-TSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECCG
T ss_pred cccCCEEEEEEcCCCCEEEEECCCC-cceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeeec
Confidence 2368988666533344555555555 97764 2332211 2222222221 578999998653
No 282
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=81.08 E-value=33 Score=31.34 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=37.4
Q ss_pred CCEEEEEecCCCe-EEEEeCCCCcEEEeccCCCcccCCCcccEEEEE-eCCEEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 335 NNELYAADYADME-VRKYDKERRLWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 335 ~~~ly~~gg~~~~-i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
++.+++.|+..+. |.+||..+++-.. .+.... +...-.+++. .++++++.|+.+ ..+.+|++..
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~--~~~~g~--h~~~v~~~~~s~~~~~l~s~s~d------~~v~iw~~~~ 271 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVR--EFRRGL--DRADVVDMKWSTDGSKLAVVSDK------WTLHVFEIFN 271 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEE--EEECTT--CCSCEEEEEECTTSCEEEEEETT------CEEEEEESSC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEE--EEEcCC--CCCcEEEEEECCCCCEEEEEECC------CEEEEEEccC
Confidence 6778888888887 9999998765322 222100 0001122332 356777777653 2477888754
No 283
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=81.05 E-value=21 Score=30.76 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=31.6
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEEE----ec-cCCCcc--cCCCcccEEEEE-eCCEEEEEcCC
Q 013929 335 NNELYAADYADMEVRKYDKERRLWFT----IG-RLPERA--NSMNGWGLAFRA-CGDRLIVIGGP 391 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~~----v~-~lp~~~--~~~~~~~~~~~~-~~~~l~v~GG~ 391 (433)
++++|++-| +..|+||..+++... +. .+|... ......-+++.. .++++|+|-|.
T Consensus 127 ~gk~yfFkG--~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~ 189 (225)
T 3oyo_A 127 GKEVYLFKG--NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ 189 (225)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT
T ss_pred CCcEEEEeC--CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC
Confidence 689999954 689999987766543 11 222210 000011133332 47899999884
No 284
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=80.99 E-value=11 Score=32.74 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=16.5
Q ss_pred CCEEEEEecCCCeEEEEeCCCC
Q 013929 335 NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
++++|++-| +..|+||..++
T Consensus 183 ~g~~YfFkg--~~Ywr~d~~~~ 202 (227)
T 3lp9_A 183 TNEVYFFKD--DHYARVKVTPX 202 (227)
T ss_dssp TTEEEEEET--TEEEEEECCSS
T ss_pred CceEEEEEC--CEEEEEECCcc
Confidence 589999954 78999998776
No 285
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=80.73 E-value=17 Score=39.19 Aligned_cols=139 Identities=17% Similarity=0.077 Sum_probs=71.2
Q ss_pred eEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceE-EEeCCCCCeEEcCCCCCCCcceeEE-EE
Q 013929 194 VIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAE-MYNSETQTWKVLPSMKNPRKMCSGV-FM 271 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-~yd~~t~~W~~~~~~p~~r~~~~~~-~~ 271 (433)
.++++|..+++...+...+..+....... +++.+++++. ...++ +||..+..-+.+. .........+ .-
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~Sp 388 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDR 388 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECC--CCCCSEEEEEECT
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEec--CCccceeeeEECC
Confidence 35566665555444332221111122222 5544444332 24688 8999888776665 1111112222 23
Q ss_pred CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecC-------
Q 013929 272 DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYA------- 344 (433)
Q Consensus 272 ~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~------- 344 (433)
+|+..+++... ..+++||+.+++-..+..-....... ....-+|+.+++++.
T Consensus 389 DG~~la~~~~~-------~~v~~~d~~tg~~~~~~~~~~~~v~~--------------~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 389 NGKFAVVANDR-------FEIMTVDLETGKPTVIERSREAMITD--------------FTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTCCEEEEEECSSSCCCC--------------EEECTTSCEEEEEEEECSSTTC
T ss_pred CCCEEEEECCC-------CeEEEEECCCCceEEeccCCCCCccc--------------eEECCCCCeEEEEecCcccccc
Confidence 66666665433 36889999998766553211111111 223335665554432
Q ss_pred ---CCeEEEEeCCCCcEEEec
Q 013929 345 ---DMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 345 ---~~~i~~yd~~~~~W~~v~ 362 (433)
...+++||..+++...+.
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECS
T ss_pred CCCCCeEEEEECCCCcEEEee
Confidence 248999999988755554
No 286
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=80.59 E-value=8.3 Score=34.97 Aligned_cols=142 Identities=13% Similarity=-0.025 Sum_probs=72.1
Q ss_pred ceeEEEEEcCCCceecCCCCCCCcceeeEEEeCC-EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGE-IAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF 270 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~ 270 (433)
...++++|..+++-+.+ ........+-++ +|+......+ .....++++|..++..+.+...+. ......
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~w 111 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETLSSKKILEAKN---IRSLEW 111 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTTEEEEEEEESE---EEEEEE
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCCceEEEEcCCC---ccceeE
Confidence 45688999888776555 111111222244 4444332211 123568999998887766544332 122222
Q ss_pred E-CCEEEEEccccC-C-------------------CCcccceEEEEECCCCce-EecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 271 M-DGKFYVIGGIGG-S-------------------DSKVLTCGEEYDLETETW-TEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 271 ~-~g~lyv~GG~~~-~-------------------~~~~~~~v~~yd~~t~~W-~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
. +|+.+++..... . .......++++|+.+++. ..+.. + ...
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~-------------- 174 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFS-------------- 174 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTC--------------
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--Ccc--------------
Confidence 2 555444333210 0 001135689999998877 55544 2 111
Q ss_pred CEEEEECCEEEEEecC---------CCeEEEEeCCCCcEEEecc
Q 013929 329 PLVAVVNNELYAADYA---------DMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 329 ~~~~~~~~~ly~~gg~---------~~~i~~yd~~~~~W~~v~~ 363 (433)
..+...+.+++.+.. ...++.+| +++++.+..
T Consensus 175 -~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 175 -SGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp -EEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred -cccCCCCeEEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 334433335554421 33688888 777777653
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=78.77 E-value=58 Score=32.78 Aligned_cols=170 Identities=14% Similarity=0.036 Sum_probs=95.1
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
++.||+.-- ..+.++++++.....+.+-.-... ...++++ .++.||+.- .....+++.++....-
T Consensus 360 ~~~ly~sD~------~~~~I~r~~~~g~~~~~v~~~~~~-~p~GlAvD~~~~~lY~tD------~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 360 EGYIYWTDD------EVRAIRRSFIDGSGSQFVVTAQIA-HPDGIAVDWVARNLYWTD------TGTDRIEVTRLNGTMR 426 (619)
T ss_dssp TTEEEEEET------TTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEE------TTTTEEEEEETTSCSC
T ss_pred CCeEEEEeC------CCCeEEEEEcCCCccEEEEECCCC-CcCceEEecccCcEEEEe------CCCCcEEEEeCCCCeE
Confidence 578998742 234688889887666544321111 1124444 478999983 2246788888876543
Q ss_pred EEcC--CCCCCCcceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCC
Q 013929 254 KVLP--SMKNPRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPP 329 (433)
Q Consensus 254 ~~~~--~~p~~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~ 329 (433)
+.+. .+..| .+.++. +|.||+.--. ....|++.++.-..=+.+.. ... .++.
T Consensus 427 ~~l~~~~l~~P---~~iavdp~~G~ly~tD~g------~~~~I~r~~~dG~~~~~l~~---~~l------------~~P~ 482 (619)
T 3s94_A 427 KILISEDLEEP---RAIVLDPMVGYMYWTDWG------EIPKIERAALDGSDRVVLVN---TSL------------GWPN 482 (619)
T ss_dssp EEEECTTCCSE---EEEEEETTTTEEEEEECS------SSCEEEEEETTSCSCEEEEC---SSC------------SCEE
T ss_pred EEEEECCCCCe---eeEEEEcCCCcEEEecCC------CCCEEEEEccCCCccEEEEe---CCC------------CCCe
Confidence 3332 12211 234443 5899988310 12357777765332222211 000 1122
Q ss_pred EEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEec--cCCCcccCCCcccEEEEEeCCEEEEEcC
Q 013929 330 LVAVV--NNELYAADYADMEVRKYDKERRLWFTIG--RLPERANSMNGWGLAFRACGDRLIVIGG 390 (433)
Q Consensus 330 ~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~--~lp~~~~~~~~~~~~~~~~~~~l~v~GG 390 (433)
++++- +++||+.....+.|+.+++....=+.+. .++.+ .+++..+++||+.--
T Consensus 483 GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P--------~glav~~~~ly~tD~ 539 (619)
T 3s94_A 483 GLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHI--------FGFTLLGDYVYWTDW 539 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSS--------CCEEEETTEEEEECT
T ss_pred eeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCc--------EEEEEECCEEEEeec
Confidence 45554 6899999888889999998765433332 23322 235567889998753
No 288
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=78.65 E-value=41 Score=30.96 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=41.7
Q ss_pred CCEEEEEccccC---CCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCC
Q 013929 272 DGKFYVIGGIGG---SDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADM 346 (433)
Q Consensus 272 ~g~lyv~GG~~~---~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~ 346 (433)
++++|+....++ ......+.+.+||+++.+ .+..++... .. +++.. +..||+.++ +
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~--------------~ia~spdg~~l~v~n~--~ 325 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-AL--------------SMTIDQQRNLMLTLDG--G 325 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CC--------------EEEEETTTTEEEEECS--S
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-ee--------------EEEECCCCCEEEEeCC--C
Confidence 478998754221 111124578999998875 333333222 21 34443 356776654 8
Q ss_pred eEEEEeCCCCcEEEecc
Q 013929 347 EVRKYDKERRLWFTIGR 363 (433)
Q Consensus 347 ~i~~yd~~~~~W~~v~~ 363 (433)
.|.+||.++++=+.+..
T Consensus 326 ~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 326 NVNVYDISQPEPKLLRT 342 (361)
T ss_dssp CEEEEECSSSSCEEEEE
T ss_pred eEEEEECCCCcceeeEE
Confidence 99999998872244444
No 289
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=77.42 E-value=27 Score=35.91 Aligned_cols=146 Identities=6% Similarity=-0.034 Sum_probs=81.6
Q ss_pred ceeEEEEEcCCC--c-eecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC--CCeEEcCCCCCCCcce
Q 013929 192 SHVIYRYSILTN--S-WSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET--QTWKVLPSMKNPRKMC 266 (433)
Q Consensus 192 ~~~~~~yd~~t~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~r~~~ 266 (433)
.+.++++|..++ + |+.+..-...... .....++.||+....+. ....++++|..+ ..|+.+-+-... .-.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~ 367 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDGA---PLKKIVRVDLSGSTPRFDTVVPESKD-NLE 367 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTTC---TTCEEEEEECSSSSCEEEEEECCCSS-EEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCCC---CCCEEEEEeCCCCccccEEEecCCCC-eEE
Confidence 457899999887 6 8776543222222 22345777877754321 246789999988 579876432211 112
Q ss_pred eEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CC-EEEEE-e
Q 013929 267 SGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NN-ELYAA-D 342 (433)
Q Consensus 267 ~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~-~ly~~-g 342 (433)
.....++.+++....+ ....++++|+....-..+. .|..... ..+.. ++ .|++. .
T Consensus 368 ~~~~~~~~lv~~~~~d-----g~~~l~~~~~~g~~~~~l~-~~~~~~v---------------~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHD-----AKSQVLAFDLDGKPAGAVS-LPGIGSA---------------SGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp EEEEEBTEEEEEEEET-----TEEEEEEEETTSCEEEECB-CSSSCEE---------------EEEECCBTCSCEEEEEE
T ss_pred EEEEECCEEEEEEEEC-----CEEEEEEEeCCCCceeecc-CCCCeEE---------------EEeecCCCCCEEEEEEc
Confidence 3344588888776554 2356788887655444442 2211100 11111 33 34443 2
Q ss_pred c--CCCeEEEEeCCCCcEEEecc
Q 013929 343 Y--ADMEVRKYDKERRLWFTIGR 363 (433)
Q Consensus 343 g--~~~~i~~yd~~~~~W~~v~~ 363 (433)
. ....++.||..+++.+.+..
T Consensus 427 s~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 427 SFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp ETTEEEEEEEEETTTTEEEECSC
T ss_pred CCCCCCEEEEEECCCCcEEEEec
Confidence 2 23689999999988776653
No 290
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=77.15 E-value=45 Score=30.62 Aligned_cols=180 Identities=11% Similarity=-0.016 Sum_probs=89.5
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEE-EECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCccee-
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESL-AVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLF- 218 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~- 218 (433)
..+..+|+.+.+-.......... ..++ .-++++++.++. +.+.+++..+++..............
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~V------~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGEV------KDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC------CEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCCCTTEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCce------EEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecCCCCCCEE
Confidence 35667787765543321111110 1111 124555555542 23677777776653222211111112
Q ss_pred -eEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC--CCCCCCcceeEE--EECCEEEEEccccCCCCcccceEE
Q 013929 219 -GSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP--SMKNPRKMCSGV--FMDGKFYVIGGIGGSDSKVLTCGE 293 (433)
Q Consensus 219 -~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~--~~~g~lyv~GG~~~~~~~~~~~v~ 293 (433)
....-++..++.++.++.. ...+..+|.......... .+......-.++ .-+|++++.|+.++ .|.
T Consensus 224 ~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-------~V~ 294 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-------SIA 294 (365)
T ss_dssp EEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-------CEE
T ss_pred EEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-------EEE
Confidence 2223477888877765432 234666776665543321 111111111222 23788888888762 478
Q ss_pred EEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeEEEEeCCCC
Q 013929 294 EYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 294 ~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
+||..+.+-.. .+....... + .+++. -++++++.|+..+.|.+||+..+
T Consensus 295 iwd~~~~~~~~--~~~~gH~~~--V----------~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 295 LVKLKDLSMSK--IFKQAHSFA--I----------TEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTTTEEEE--EETTSSSSC--E----------EEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCcEEE--EecCcccCC--E----------EEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 89998865321 111111110 0 01222 27888888888999999997543
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=76.19 E-value=22 Score=34.06 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=58.6
Q ss_pred CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE-ECCEEEEEccccCCCCcccceEEEEECCCCceE
Q 013929 225 EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF-MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWT 303 (433)
Q Consensus 225 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 303 (433)
+.||+.-. . ..+.++|+.++..+.+.. .. ..-...++ -+|+||+.-... ......+..++... .|.
T Consensus 153 g~Lyv~D~------~-~~I~~id~~~g~v~~~~~-~~-~~P~giavd~dG~lyVad~~~---~~~~~gv~~~~~~~-~~~ 219 (433)
T 4hw6_A 153 DDLYWVGQ------R-DAFRHVDFVNQYVDIKTT-NI-GQCADVNFTLNGDMVVVDDQS---SDTNTGIYLFTRAS-GFT 219 (433)
T ss_dssp CEEEEECB------T-SCEEEEETTTTEEEEECC-CC-SCEEEEEECTTCCEEEEECCS---CTTSEEEEEECGGG-TTC
T ss_pred CEEEEEeC------C-CCEEEEECCCCEEEEeec-CC-CCccEEEECCCCCEEEEcCCC---CcccceEEEEECCC-Cee
Confidence 89999832 1 679999999888776643 11 11122222 356688874321 11122345555432 222
Q ss_pred ---ecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCCcE
Q 013929 304 ---EIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERRLW 358 (433)
Q Consensus 304 ---~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W 358 (433)
.++.+..+ ..+++. ++.||+.....+.|++||+.+++-
T Consensus 220 ~~~~~~~~~~P-----------------~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 220 ERLSLCNARGA-----------------KTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CEEEEEECSSB-----------------CCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ccccccccCCC-----------------CEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 12211111 123333 689999877678999999987765
No 292
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=75.37 E-value=55 Score=30.77 Aligned_cols=101 Identities=9% Similarity=0.018 Sum_probs=51.8
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCC---CcccceeEEEEEcCCCcee-cCCCCCC-C
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELT---AHHISHVIYRYSILTNSWS-SGMRMNA-P 214 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~---~~~~~~~~~~yd~~t~~W~-~~~~~p~-~ 214 (433)
+.+.++|+.+.+-... ++.... .+..+.- +..+|+...... .....+.+.++|+.|++-. .++ ++. .
T Consensus 59 ~~V~ViD~~t~~v~~~--I~vG~~----P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~-v~~g~ 131 (386)
T 3sjl_D 59 TQQFVIDGEAGRVIGM--IDGGFL----PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIE-LPDAP 131 (386)
T ss_dssp EEEEEEETTTTEEEEE--EEECSS----CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE-ETTCC
T ss_pred CEEEEEECCCCeEEEE--EECCCC----CcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEE-CCCcc
Confidence 5788899987664321 111110 1111222 346887642100 0013456999999998753 221 111 1
Q ss_pred -----cceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 215 -----RCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 215 -----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
...+.++.- +.++||.... ..+.+.++|..+++=
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~~-----~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQFS-----PAPAVGVVDLEGKAF 172 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECS-----SSCEEEEEETTTTEE
T ss_pred ccccCCCCceEEEcCCCCEEEEEEcC-----CCCeEEEEECCCCcE
Confidence 122233332 5578887321 136789999998753
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=73.55 E-value=53 Score=29.73 Aligned_cols=151 Identities=11% Similarity=0.137 Sum_probs=76.7
Q ss_pred CCceecCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCC-CCCC-cceeEEEECCEEEEE
Q 013929 202 TNSWSSGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSM-KNPR-KMCSGVFMDGKFYVI 278 (433)
Q Consensus 202 t~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~r-~~~~~~~~~g~lyv~ 278 (433)
-.+|+.+.. +.......+... .+.+|++|. . ..++.-.-.-.+|+.+... +.+. ....+...++.+|++
T Consensus 24 g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~-~------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~ 95 (327)
T 2xbg_A 24 YNPWEAIQL-PTTATILDMSFIDRHHGWLVGV-N------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIV 95 (327)
T ss_dssp SCCEEEEEC-SCSSCEEEEEESSSSCEEEEET-T------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEE
T ss_pred CCCceEeec-CCCCcEEEEEECCCCcEEEEcC-C------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEE
Confidence 457887652 333333333333 457788653 1 1233333234589998542 2222 233444557788887
Q ss_pred ccccCCCCcccceEEEEECCCCceEecCCCC-CCCCCCCCCCcCCCCcCCCCEEE-EECCEEEEEecCCCeEEEEeCCCC
Q 013929 279 GGIGGSDSKVLTCGEEYDLETETWTEIPNMS-PARGGAARGTEMPASAEAPPLVA-VVNNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 279 GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~~~~~~~~~~~~-~~~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
|... .+++-+-.-.+|+.+.... .+... ..++ .-++.+|+.+. .+.+++-+-...
T Consensus 96 g~~g--------~i~~S~DgG~tW~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~~-~g~v~~S~DgG~ 152 (327)
T 2xbg_A 96 GEPP--------IMLHTTDGGQSWSQIPLDPKLPGSP--------------RLIKALGNGSAEMITN-VGAIYRTKDSGK 152 (327)
T ss_dssp EETT--------EEEEESSTTSSCEECCCCTTCSSCE--------------EEEEEEETTEEEEEET-TCCEEEESSTTS
T ss_pred ECCC--------eEEEECCCCCCceECccccCCCCCe--------------EEEEEECCCCEEEEeC-CccEEEEcCCCC
Confidence 5221 2333222246899986431 11111 1233 35688888874 455666555567
Q ss_pred cEEEeccCCCcccCCCcccEEEEE-eCCEEEEEc
Q 013929 357 LWFTIGRLPERANSMNGWGLAFRA-CGDRLIVIG 389 (433)
Q Consensus 357 ~W~~v~~lp~~~~~~~~~~~~~~~-~~~~l~v~G 389 (433)
+|+.+....... . .+++. .+++++++|
T Consensus 153 tW~~~~~~~~~~-----~-~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 153 NWQALVQEAIGV-----M-RNLNRSPSGEYVAVS 180 (327)
T ss_dssp SEEEEECSCCCC-----E-EEEEECTTSCEEEEE
T ss_pred CCEEeecCCCcc-----e-EEEEEcCCCcEEEEE
Confidence 899986422211 1 23333 356777766
No 294
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=73.17 E-value=43 Score=28.60 Aligned_cols=143 Identities=14% Similarity=0.104 Sum_probs=73.9
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCCc-e--ecC----CCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCc
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTNS-W--SSG----MRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSS 242 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W--~~~----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 242 (433)
++....+++|+|-|. .+|+++..... . ..+ +.+|. ....+... .++++|+|-| +.
T Consensus 35 Ai~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG--------~~ 97 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG--------NE 97 (218)
T ss_dssp EEEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET--------TE
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC--------CE
Confidence 345578999999765 35666544321 1 111 23332 12222222 2689999954 45
Q ss_pred eEEEeCCCCC--e-EEcCC--CCCCCcceeEEE---ECCEEEEEccccCCCCcccceEEEEECCCCceEec---------
Q 013929 243 AEMYNSETQT--W-KVLPS--MKNPRKMCSGVF---MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI--------- 305 (433)
Q Consensus 243 ~~~yd~~t~~--W-~~~~~--~p~~r~~~~~~~---~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--------- 305 (433)
.|+||..+-. + +.+.. +|.....-.+|. .+|++|++-|. ..++||..+++-..-
T Consensus 98 yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~---------~ywr~d~~~~~v~~gyPr~i~~~w 168 (218)
T 1gen_A 98 YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRYNEVKKKMDPGFPKLIADAW 168 (218)
T ss_dssp EEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT---------EEEEEETTTTEECSSCCEEHHHHS
T ss_pred EEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC---------EEEEEECccccccCCCCcchhhcc
Confidence 7888753110 0 11111 121111222333 36899999663 368899877632111
Q ss_pred CCCCCCCCCCCCCCcCCCCcCCCCEEEEEC--CEEEEEecCCCeEEEEeCCCCc
Q 013929 306 PNMSPARGGAARGTEMPASAEAPPLVAVVN--NELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 306 ~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~--~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
..+|. .. .++...+ +.+|++- .+..|+||..+..
T Consensus 169 ~g~p~--~i--------------daAf~~~~~g~~YfFk--g~~y~~~~~~~~~ 204 (218)
T 1gen_A 169 NAIPD--NL--------------DAVVDLQGGGHSYFFK--GAYYLKLENQSLK 204 (218)
T ss_dssp SSCCS--SC--------------SEEEECTTTCEEEEEE--TTEEEEEETTEEE
T ss_pred CCCCC--CC--------------CEEEEEcCCCcEEEEE--CCEEEEEECCcee
Confidence 11111 11 1344444 8999994 4678999986654
No 295
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=72.91 E-value=6.8 Score=39.25 Aligned_cols=269 Identities=10% Similarity=0.013 Sum_probs=138.4
Q ss_pred ccEEEEeecc-ceEEEEecCCCcEEeCCCCCCccccccCCceEEE----ECCEEEEECCCC-----------CCccccee
Q 013929 131 EHWVYFSCHL-LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLA----VGTELLVFGREL-----------TAHHISHV 194 (433)
Q Consensus 131 ~~~l~~~~~~-~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~----~~~~iyv~GG~~-----------~~~~~~~~ 194 (433)
..|+|++... ..+.+.|+.+.+-..+-.+|.....| .++. -++++|+-+... ......+.
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph----g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH----GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE----EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc----ceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 3588987543 46999999998755433444322211 2232 256888775331 11234567
Q ss_pred EEEEEcCCCc--eecC-CCCCCCcceeeEEEe-CCEEEEEccCC-------------------------------CCCCc
Q 013929 195 IYRYSILTNS--WSSG-MRMNAPRCLFGSASL-GEIAILAGGSD-------------------------------LEGNI 239 (433)
Q Consensus 195 ~~~yd~~t~~--W~~~-~~~p~~r~~~~~~~~-~~~iyv~GG~~-------------------------------~~~~~ 239 (433)
+-+.|..+.+ |+.. +.-| ....+.. +..+|+.--.. +....
T Consensus 177 vtvID~~t~~v~~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEEEECCCCeEEEEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 8899999874 5422 2211 1111111 23333332111 11122
Q ss_pred CCceEEEeCCCCCeEE-cCCCCCCCcceeEEEE-CCE-EEEEccccCCCCcccceEEEEECCCCc-eE---------ecC
Q 013929 240 LSSAEMYNSETQTWKV-LPSMKNPRKMCSGVFM-DGK-FYVIGGIGGSDSKVLTCGEEYDLETET-WT---------EIP 306 (433)
Q Consensus 240 ~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~g~-lyv~GG~~~~~~~~~~~v~~yd~~t~~-W~---------~~~ 306 (433)
.+.+-+.|..+.+.+. +..+|.+..-|++.+. +|+ +|+.+.. .+.+.+||..+.. +. .+.
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-------s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-------SPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-------SSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-------CCeEEEEECcccccccccccCcccceEE
Confidence 4568889998843222 2234444555555543 555 5555433 3568889998652 10 011
Q ss_pred CCCCCCCCCCCCCcCCCCcCCCCEEEE--ECCEEEEEecCCCeEEEEeCCC--------CcEEEeccCCCccc-CCC--c
Q 013929 307 NMSPARGGAARGTEMPASAEAPPLVAV--VNNELYAADYADMEVRKYDKER--------RLWFTIGRLPERAN-SMN--G 373 (433)
Q Consensus 307 ~~p~~r~~~~~~~~~~~~~~~~~~~~~--~~~~ly~~gg~~~~i~~yd~~~--------~~W~~v~~lp~~~~-~~~--~ 373 (433)
.++.+. + +--+. -+|.+|+.-...+.|.+||.++ +.+..+..++.... .+. .
T Consensus 326 ~v~vG~-g--------------P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~ 390 (595)
T 1fwx_A 326 EPELGL-G--------------PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTV 390 (595)
T ss_dssp CCBCCS-C--------------EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEET
T ss_pred EcCCCC-C--------------cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceec
Confidence 111111 1 12222 3578898888889999999876 33666665554321 000 0
Q ss_pred ccEEEEEeCCEEEEEcCCCCCC-----CCeeEEE-EeecCCCCCCceEecccCCCcEEEEEEEe
Q 013929 374 WGLAFRACGDRLIVIGGPKASG-----EGFIELN-SWVPSEGPPQWNLLARKQSANFVYNCAVM 431 (433)
Q Consensus 374 ~~~~~~~~~~~l~v~GG~~~~~-----~~~~~~~-~~~~~~~~~~W~~v~~~p~~~~~~~~~v~ 431 (433)
.+.+...-|..||+.-++.+.. .-..+.. .++. ...+-+.+...|....-|.++++
T Consensus 391 ~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~di--s~~~m~lv~d~p~~~ePh~~~i~ 452 (595)
T 1fwx_A 391 MGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDI--SGDKMVLVHDGPTFAEPHDAIAV 452 (595)
T ss_dssp TTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEEC--SSSSCEEEEEEEESSCCCCEEEE
T ss_pred cceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEc--CCCcEEEEEEEcCCCCCCceEEc
Confidence 0111123356788877665321 1112332 3444 56678888888776666666654
No 296
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=72.80 E-value=78 Score=31.38 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=22.6
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEEEec
Q 013929 335 NNELYAADYADMEVRKYDKERRLWFTIG 362 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~~v~ 362 (433)
++++++.|+..+.|..||..++....+.
T Consensus 459 dg~~lasgs~D~~v~lwd~~~~~~~~~~ 486 (611)
T 1nr0_A 459 DKQFVAVGGQDSKVHVYKLSGASVSEVK 486 (611)
T ss_dssp TSCEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred CCCEEEEeCCCCeEEEEEccCCceeeee
Confidence 6788888888899999999887765443
No 297
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=72.69 E-value=43 Score=28.36 Aligned_cols=48 Identities=13% Similarity=0.234 Sum_probs=30.1
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEE-----Ee----ccCCCcccCCCcccEEEEEeCCEEEEEcCC
Q 013929 335 NNELYAADYADMEVRKYDKERRLWF-----TI----GRLPERANSMNGWGLAFRACGDRLIVIGGP 391 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~-----~v----~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~ 391 (433)
++++|++-| +..|+||..+++=. .+ ..+|... -+++ ..++++|+|-|.
T Consensus 127 ~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~i------DaAf-~~~g~~YfFkg~ 183 (207)
T 1pex_A 127 TGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKV------DAVY-EKNGYIYFFNGP 183 (207)
T ss_dssp TSEEEEEET--TEEEEEETTTTEECSSCCCBHHHHSTTSCSCC------SEEE-EETTEEEEEETT
T ss_pred CCEEEEEeC--CEEEEEeCcCccccCCCCccHHHcCCCCCCCc------cEEE-EcCCcEEEEECC
Confidence 489999954 78999998765311 01 1223221 1444 468999999874
No 298
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=71.29 E-value=61 Score=29.47 Aligned_cols=64 Identities=5% Similarity=-0.014 Sum_probs=37.6
Q ss_pred CCEEEEEccccCCCCcccce-EEEEECCCCceEecCCCCCC-CCCCCCCCcCCCCcCCCCEEEE-ECCEEEEEecCCCeE
Q 013929 272 DGKFYVIGGIGGSDSKVLTC-GEEYDLETETWTEIPNMSPA-RGGAARGTEMPASAEAPPLVAV-VNNELYAADYADMEV 348 (433)
Q Consensus 272 ~g~lyv~GG~~~~~~~~~~~-v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~~~~~~~~~~~-~~~~ly~~gg~~~~i 348 (433)
+|++.+.|+.++ . +.+||+.+.+-.. .+... .... -.+++. -++++++.++..+.+
T Consensus 206 ~g~~l~s~s~d~-------~~v~iwd~~~~~~~~--~~~~g~h~~~------------v~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 206 KSDMVATCSQDG-------TIIRVFKTEDGVLVR--EFRRGLDRAD------------VVDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp TSSEEEEEETTC-------SEEEEEETTTCCEEE--EEECTTCCSC------------EEEEEECTTSCEEEEEETTCEE
T ss_pred CCCEEEEEeCCC-------CEEEEEECCCCcEEE--EEEcCCCCCc------------EEEEEECCCCCEEEEEECCCEE
Confidence 677777777652 3 6889998765322 11100 0010 001222 267788888888999
Q ss_pred EEEeCCCC
Q 013929 349 RKYDKERR 356 (433)
Q Consensus 349 ~~yd~~~~ 356 (433)
.+||..+.
T Consensus 265 ~iw~~~~~ 272 (355)
T 3vu4_A 265 HVFEIFND 272 (355)
T ss_dssp EEEESSCC
T ss_pred EEEEccCC
Confidence 99998754
No 299
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=70.13 E-value=72 Score=30.20 Aligned_cols=59 Identities=14% Similarity=0.082 Sum_probs=32.2
Q ss_pred CEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECC
Q 013929 225 EIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLE 298 (433)
Q Consensus 225 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~ 298 (433)
+.+++.|+.++ .+.+||..+..-.. .... .......+. -+|+.++.|+.++ .+.+||+.
T Consensus 162 ~~~las~s~Dg------~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~dg-------~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLADG------SIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQNG-------TVVQYLPT 222 (434)
T ss_dssp TTEEEEEETTS------CEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETTS-------CEEEECTT
T ss_pred CCEEEEEECCC------eEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCCC-------cEEEEccC
Confidence 56777776543 47888888763211 0111 111122222 2577777777652 47889987
No 300
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=69.78 E-value=27 Score=32.93 Aligned_cols=73 Identities=14% Similarity=0.020 Sum_probs=45.0
Q ss_pred CCEEEEEcccc--CCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEE-ECC--EEEEEecCCC
Q 013929 272 DGKFYVIGGIG--GSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAV-VNN--ELYAADYADM 346 (433)
Q Consensus 272 ~g~lyv~GG~~--~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~-~~~--~ly~~gg~~~ 346 (433)
++++|+.-+.. +.....-+.++++|+++.+-..- ++.+.... ++++ .++ .||+..+..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~--i~vg~~~~--------------~lavs~D~~~~ly~tn~~~~ 354 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FEMGHEID--------------SINVSQDEKPLLYALSTGDK 354 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE--EEEEEEEC--------------EEEECSSSSCEEEEEETTTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE--EECCCCcc--------------eEEECCCCCeEEEEEcCCCC
Confidence 57899974322 22233457899999999875332 22111111 2333 344 5787777789
Q ss_pred eEEEEeCCCCcEEE
Q 013929 347 EVRKYDKERRLWFT 360 (433)
Q Consensus 347 ~i~~yd~~~~~W~~ 360 (433)
.|.+||..+++-..
T Consensus 355 ~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 355 TLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEETTTCCEEE
T ss_pred eEEEEECCCCcEEE
Confidence 99999999987543
No 301
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=68.66 E-value=1.1e+02 Score=31.40 Aligned_cols=252 Identities=17% Similarity=0.163 Sum_probs=121.2
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccccccCCceEEEE----CCEEEEECCCCCC-c-ccceeEEEEEcCCCcee
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV----GTELLVFGRELTA-H-HISHVIYRYSILTNSWS 206 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~----~~~iyv~GG~~~~-~-~~~~~~~~yd~~t~~W~ 206 (433)
-+|+......++..+-.-.+|..+...+............+++ .+.||+..|.... . .....+++=.=.-.+|+
T Consensus 37 ~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~ 116 (737)
T 2cn3_A 37 LIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWE 116 (737)
T ss_dssp CEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCE
T ss_pred EEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcc
Confidence 3455444456777777789999986643221100011122333 2578887543111 0 01123443333345798
Q ss_pred cCCC-C------CCCcceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCc------------
Q 013929 207 SGMR-M------NAPRCLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRK------------ 264 (433)
Q Consensus 207 ~~~~-~------p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~------------ 264 (433)
++.. . |.....+.+++. .+.||+... .+ ..+++=+=.-.+|+.+..+|....
T Consensus 117 ~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g-----~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~ 190 (737)
T 2cn3_A 117 KTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG-----NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKD 190 (737)
T ss_dssp EEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT-----CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCS
T ss_pred cCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cC-----CcEEEeCCCCcceecccCCCCCcccccCcccccccC
Confidence 7642 1 111122344443 256666421 10 223332223357999876553210
Q ss_pred --ceeEEEEC----------CEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEE
Q 013929 265 --MCSGVFMD----------GKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVA 332 (433)
Q Consensus 265 --~~~~~~~~----------g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~ 332 (433)
....+.++ +.||+.-...+ ..+++=.-.-.+|+.+..+|.....+ ..
T Consensus 191 ~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~------~~v~~S~DgG~tW~~~~~~p~~~~~~---------------~~ 249 (737)
T 2cn3_A 191 IIGVVWVVFDKSSSTPGNPTKTIYVGVADKN------ESIYRSTDGGVTWKAVPGQPKGLLPH---------------HG 249 (737)
T ss_dssp BCCEEEEEECGGGSCTTSCCSCEEEEESCSS------CCEEEESSTTSCCEECTTCCCSSEEE---------------EE
T ss_pred CCCEEEEEcCCCCcccCCCCCEEEEEecCCC------ccEEEEcCCCCceEECCCCCCcccce---------------EE
Confidence 12223332 26666422110 11222111235799988665432221 22
Q ss_pred EE--CCEEEEEec---------CCCeEEEEeCCCCcEEEeccCCCcccCCCcccEE-EEEe---CCEEEEEcCCCCCCCC
Q 013929 333 VV--NNELYAADY---------ADMEVRKYDKERRLWFTIGRLPERANSMNGWGLA-FRAC---GDRLIVIGGPKASGEG 397 (433)
Q Consensus 333 ~~--~~~ly~~gg---------~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~-~~~~---~~~l~v~GG~~~~~~~ 397 (433)
++ ++.+|+..+ ....+++++....+|+++...|..... ..++.+ +++. .+.||+.+.....
T Consensus 250 ~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~-~~~~~~~i~v~p~~~~~ly~~~~~~~~--- 325 (737)
T 2cn3_A 250 VLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSD-NRFCFAGLAVDRQNPDIIMVTSMNAWW--- 325 (737)
T ss_dssp EECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTT-CCSEEEEEEECTTCTTCEEEEEECCCS---
T ss_pred EECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcc-cccccccEEEcCCCCCEEEEEecccCC---
Confidence 33 788998642 345799999999999999876653100 112222 3222 2578877643110
Q ss_pred eeEEEEeecCCCCCCceEe
Q 013929 398 FIELNSWVPSEGPPQWNLL 416 (433)
Q Consensus 398 ~~~~~~~~~~~~~~~W~~v 416 (433)
....+|.-...-.+|+.+
T Consensus 326 -~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 326 -PDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp -SCCCEEEESSTTSSCEES
T ss_pred -CCccEEEeCCCCccccch
Confidence 112344444456688877
No 302
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=67.40 E-value=1.2e+02 Score=31.32 Aligned_cols=220 Identities=14% Similarity=0.105 Sum_probs=102.8
Q ss_pred cEEEEeeccceEEEEecCCCcEEeCCC-C-----CCccccccCCceEEEE----CCEEEEECCCCCCcccceeEEEEEcC
Q 013929 132 HWVYFSCHLLEWEAFDPIRRRWMHLPR-M-----TSNECFMCSDKESLAV----GTELLVFGRELTAHHISHVIYRYSIL 201 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~~W~~l~~-~-----p~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~ 201 (433)
..+|+.....-++.-+-.-.+|..+.. + +...... .....+++ .+.+|+..|..........+++=+-.
T Consensus 34 ~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~-~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~Dg 112 (763)
T 3a0f_A 34 DLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANL-LGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDR 112 (763)
T ss_dssp TCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCC-CSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESST
T ss_pred CEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccc-cceeEEEECCCCCCEEEEEecccccCCCCceEEEECCC
Confidence 355665545556666666789999875 3 2110000 11122222 36788865431111111234433323
Q ss_pred CCceecCCC-CC-----CCcce-eeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCC---cceeE
Q 013929 202 TNSWSSGMR-MN-----APRCL-FGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPR---KMCSG 268 (433)
Q Consensus 202 t~~W~~~~~-~p-----~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r---~~~~~ 268 (433)
-.+|+++.. .+ ..|.. ..+++. .+.+|+.+. ...+++=+=.-.+|+.+..++... .....
T Consensus 113 G~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~ 185 (763)
T 3a0f_A 113 GKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR-------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIIS 185 (763)
T ss_dssp TSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEE
T ss_pred CCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC-------CCcEEEECCCCcCccccccCcccCCCccceEE
Confidence 458987642 11 11221 234443 357777631 122333222335799988666432 22333
Q ss_pred EEE----CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCC-----cCCCCcCCCCEEEEE--CCE
Q 013929 269 VFM----DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGT-----EMPASAEAPPLVAVV--NNE 337 (433)
Q Consensus 269 ~~~----~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-----~~~~~~~~~~~~~~~--~~~ 337 (433)
+.+ .+.+|+.....+ .+++=+-.-.+|+.+...+.....++... +............++ ++.
T Consensus 186 i~~~p~~~~~~~~~~~~~g-------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~ 258 (763)
T 3a0f_A 186 VIFDPKNVGTAYVASHAVG-------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGR 258 (763)
T ss_dssp EEECSSSTTCEEEEESSTT-------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSC
T ss_pred EEECCCCCCEEEEEEeCCC-------eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCc
Confidence 333 246777643211 12222222357999875442110000000 000000000112222 688
Q ss_pred EEEEe--------cCCCeEEEEeCCCCcEEEeccCCC
Q 013929 338 LYAAD--------YADMEVRKYDKERRLWFTIGRLPE 366 (433)
Q Consensus 338 ly~~g--------g~~~~i~~yd~~~~~W~~v~~lp~ 366 (433)
||+.. +....+++.+-...+|+.+.++|.
T Consensus 259 l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 259 LYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp EEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred EEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 89873 345689999989999999976554
No 303
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=66.16 E-value=1.2e+02 Score=31.05 Aligned_cols=98 Identities=8% Similarity=-0.092 Sum_probs=54.0
Q ss_pred ceeEEEEEcCCC--ce--ecCCCCCCCcceeeEE-EeCCEEEEEccCCCCCCcCCceEEEeCCC-CCeEE-cCCCCCCCc
Q 013929 192 SHVIYRYSILTN--SW--SSGMRMNAPRCLFGSA-SLGEIAILAGGSDLEGNILSSAEMYNSET-QTWKV-LPSMKNPRK 264 (433)
Q Consensus 192 ~~~~~~yd~~t~--~W--~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~-~~~~p~~r~ 264 (433)
.++++++|..+. ++ +.+.+-... ..+... ..++.||+..-.++ .....++.+|..+ ..|+. +-+......
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~~t~~~~--a~~~~L~~~d~~~~~~~~~~li~~~~~~~ 370 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVILTNEGG--AVNHKLLIAPRGQPSDWSHVLVDHSEDVF 370 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEEEECTTT--CTTCEEEEEETTSTTCCCCEEECCCSSEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEEEeCCCC--CCCcEEEEEcCCCcccceeeEECCCCCcE
Confidence 557899998875 46 555321111 112222 33778888865431 1235789999876 57875 322111111
Q ss_pred ceeEEEECCEEEEEccccCCCCcccceEEEEEC
Q 013929 265 MCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 265 ~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
.......++.|++....+ ....++++|+
T Consensus 371 l~~~~~~~~~lv~~~~~~-----g~~~l~~~dl 398 (751)
T 2xe4_A 371 MESIAVRSNYLVVAGRRA-----GLTRIWTMMA 398 (751)
T ss_dssp EEEEEECSSEEEEEEEET-----TEEEEEEEEC
T ss_pred EEEEEEECCEEEEEEEeC-----CEEEEEEEec
Confidence 123334567777775443 2456788986
No 304
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=65.39 E-value=75 Score=29.44 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=22.1
Q ss_pred ECCEEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 334 VNNELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 334 ~~~~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
-++..++.|+..+.|.+||..+++-..+
T Consensus 352 ~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 352 GSDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp TTSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEeccCCEEEEEEcCCCcceee
Confidence 3566667888889999999999876554
No 305
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=64.53 E-value=50 Score=33.37 Aligned_cols=59 Identities=3% Similarity=-0.215 Sum_probs=32.4
Q ss_pred ceeEEEEEcCCCceecCCCCCCC--cceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC
Q 013929 192 SHVIYRYSILTNSWSSGMRMNAP--RCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP 257 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 257 (433)
...++++|..+++-+.+...... +......+-+++.++++.. ..++++|..++.-..+.
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSCCEEEE
T ss_pred eeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-------CeEEEEECCCCceEEEe
Confidence 35799999999876655543221 1111222234543444321 36888888777655543
No 306
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=63.78 E-value=1.5e+02 Score=31.21 Aligned_cols=99 Identities=9% Similarity=0.013 Sum_probs=50.3
Q ss_pred CceEEEeCCCCCeEEcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecC--CCC---CCCC
Q 013929 241 SSAEMYNSETQTWKVLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIP--NMS---PARG 313 (433)
Q Consensus 241 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p---~~r~ 313 (433)
..+.++|..+.+-...-..+ ..-.++. -+++..+.|+.++ .+..||+.+..-.... ... ....
T Consensus 79 ~~v~lWd~~~~~~~~~~~~~---~~V~~v~~sp~g~~l~sgs~dg-------~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFVP---GKITSIDTDASLDWMLIGLQNG-------SMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp CEEEEEETTTCSEEEEEECS---SCEEEEECCTTCSEEEEEETTS-------CEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred CeEEEEECCCCcEEEEEcCC---CCEEEEEECCCCCEEEEEcCCC-------cEEEEECCCCccccceeccccccccccc
Confidence 45888898876532111111 1112222 2556666666552 4788999887542110 000 0001
Q ss_pred CCCCCCcCCCCcCCCCEEEEEC--CEEEEEecCCCeEEEEeCCCCcEE
Q 013929 314 GAARGTEMPASAEAPPLVAVVN--NELYAADYADMEVRKYDKERRLWF 359 (433)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~--~~ly~~gg~~~~i~~yd~~~~~W~ 359 (433)
+|. ..-.+++... +.+++.|+..+.+ .||..+++-.
T Consensus 149 ~h~---------~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 149 ARL---------SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIK 186 (902)
T ss_dssp SCC---------CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEE
T ss_pred cCC---------CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceE
Confidence 110 0001344443 3677788888888 9999987643
No 307
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=63.75 E-value=26 Score=30.25 Aligned_cols=100 Identities=9% Similarity=0.005 Sum_probs=55.0
Q ss_pred ECCEEEEECCCCCCcccceeEEEEE--cC-------------CCceecCCCC--CCCcceeeEEE-eCCEEEEEccCCCC
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYS--IL-------------TNSWSSGMRM--NAPRCLFGSAS-LGEIAILAGGSDLE 236 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd--~~-------------t~~W~~~~~~--p~~r~~~~~~~-~~~~iyv~GG~~~~ 236 (433)
.++++|+|-|. .+|+|+ +. +..|..++.- |. ....+... .++++|+|-|
T Consensus 71 ~~g~~~fFKg~--------~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~-~IDAA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 71 ENNEAFIFYEN--------FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES-GIDAAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp STTEEEEEETT--------EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT-CCSEEEECSSTTEEEEEET----
T ss_pred CCCEEEEEeCC--------EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCC-cccEEEEECCCCEEEEEEC----
Confidence 57899999775 578888 32 1224444321 21 22222222 2689999965
Q ss_pred CCcCCceEEEeCCCCCeEE-----cC-CCCCCC-----cceeEEE---ECCEEEEEccccCCCCcccceEEEEECCCC
Q 013929 237 GNILSSAEMYNSETQTWKV-----LP-SMKNPR-----KMCSGVF---MDGKFYVIGGIGGSDSKVLTCGEEYDLETE 300 (433)
Q Consensus 237 ~~~~~~~~~yd~~t~~W~~-----~~-~~p~~r-----~~~~~~~---~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~ 300 (433)
+..|+||..+++-.. +. .+|... ..-.+|+ .++++|++-|.. .+.||..+.
T Consensus 138 ----~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~~---------Ywr~d~~~~ 202 (227)
T 3lp9_A 138 ----DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDDH---------YARVKVTPX 202 (227)
T ss_dssp ----TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETTE---------EEEEECCSS
T ss_pred ----CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECCE---------EEEEECCcc
Confidence 458899987653211 10 012100 1222333 358999996643 488998776
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=63.70 E-value=1.3e+02 Score=30.27 Aligned_cols=169 Identities=17% Similarity=0.055 Sum_probs=89.4
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCc-eecCCCCCCCcceeeEEEe--CCEEEEEccCCCCCCcCCceEEEeCCCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNS-WSSGMRMNAPRCLFGSASL--GEIAILAGGSDLEGNILSSAEMYNSETQT 252 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 252 (433)
++.||+.-- ..+.++++++.... +..+-.-.. .....+++- +++||+.-. ....++++++....
T Consensus 51 ~~~ly~sD~------~~~~I~r~~~~g~~~~~~v~~~~~-~~P~GlAvD~~~~~ly~~d~------~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 51 HGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGEKLYWTDS------ETNRIEVSNLDGSL 117 (619)
T ss_dssp TTEEEEEET------TTTEEEEEEC-----CEEEECSSC-SCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCS
T ss_pred CCEEEEEEC------CCCeEEEEEccCCCceEEEEeCCC-CCcCeEEEEecCCEEEEEeC------CCCEEEEEECCCCC
Confidence 678888731 23457888876542 222211111 122344443 789999832 24678899987654
Q ss_pred eEEc--CCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCC
Q 013929 253 WKVL--PSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAP 328 (433)
Q Consensus 253 W~~~--~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 328 (433)
=+.+ ..+..|+ ..++ .+|.||+.--. ....|++.++....-+.+.... . .++
T Consensus 118 ~~~l~~~~l~~P~---~Iavdp~~g~ly~tD~g------~~~~I~r~~~dG~~~~~l~~~~--~-------------~~P 173 (619)
T 3s94_A 118 RKVLFWQELDQPR---AIALDPSSGFMYWTDWG------EVPKIERAGMDGSSRFIIINSE--I-------------YWP 173 (619)
T ss_dssp CEEEECSSCSCCC---CEEEETTTTEEEEEECS------SSCEEEEEETTSCSCEEEECSS--C-------------SSE
T ss_pred EEEEEeCCCCCCc---eEEEecCCCeEEEeccC------CCCEEEEEECCCCceEEEEeCC--C-------------CCC
Confidence 3333 2333333 3444 36899998310 1245788887654333332100 0 011
Q ss_pred CEEEEE--CCEEEEEecCCCeEEEEeCCCCcEEEec--cCCCcccCCCcccEEEEEeCCEEEEEc
Q 013929 329 PLVAVV--NNELYAADYADMEVRKYDKERRLWFTIG--RLPERANSMNGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 329 ~~~~~~--~~~ly~~gg~~~~i~~yd~~~~~W~~v~--~lp~~~~~~~~~~~~~~~~~~~l~v~G 389 (433)
.++++. +++||+.....+.|+++|.....=+.+. .++.+ .+++..+++||+.-
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P--------~gi~~~~~~ly~td 230 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP--------FALTLFEDILYWTD 230 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------C--------CCEEESSSEEEEEC
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCc--------eEEEEeCCEEEEec
Confidence 245554 6899999888889999999764333332 22222 23455677888875
No 309
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=63.65 E-value=1.6e+02 Score=31.46 Aligned_cols=195 Identities=10% Similarity=-0.062 Sum_probs=96.7
Q ss_pred ceEEEEecCCCcEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCc---c-
Q 013929 141 LEWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPR---C- 216 (433)
Q Consensus 141 ~~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r---~- 216 (433)
.+++.+|....+-..+...+... .......+|+.+++............++++|..+++-+.+...+... .
T Consensus 33 ~~l~~~~~~gg~~~~lt~~~~~v-----~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~ 107 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSNLGVI-----NNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRM 107 (1045)
T ss_dssp TEEEEEETTTCCEEEEECSSSEE-----EEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEE
T ss_pred CcEEEEECCCCcEEEeeeCCCcc-----cCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCccccccc
Confidence 57888888877766664322211 00112225554444422100012346899999888766654322111 0
Q ss_pred eeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCcceeEEEECCEEEEEccccCC-------CCc
Q 013929 217 LFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGS-------DSK 287 (433)
Q Consensus 217 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~-------~~~ 287 (433)
...... -+++|++.+..+........++.+|+.++.-+.+...+. .......| +.+.|..... ...
T Consensus 108 ~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----~~~~~spG-~l~~~~~~~~~~~~~~~~g~ 182 (1045)
T 1k32_A 108 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPA----THILFADG-RRVIGRNTFELPHWKGYRGG 182 (1045)
T ss_dssp CSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSC----SEEEEETT-EEEEEESCSCCTTSTTCCST
T ss_pred ccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCc----ceeeeCCC-EEEEeccCCCccccccccCC
Confidence 001222 266666665543222234578999998887766654332 12223336 4444432211 011
Q ss_pred ccceEEEEECCCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCC--CeEEEEeCCCCcEEEec
Q 013929 288 VLTCGEEYDLETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYAD--MEVRKYDKERRLWFTIG 362 (433)
Q Consensus 288 ~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~--~~i~~yd~~~~~W~~v~ 362 (433)
....++.++.. +....+..... .. ...+...+.+++.+... ..+|.++..++.-+.+.
T Consensus 183 ~~~~lw~~~~~-~~~~~l~~~~~--~v--------------~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~ 242 (1045)
T 1k32_A 183 TRGKIWIEVNS-GAFKKIVDMST--HV--------------SSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHT 242 (1045)
T ss_dssp TCCEEEEEEET-TEEEEEECCSS--CC--------------EEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECC
T ss_pred CcCCEEEECCC-CCeEECcCCCC--cc--------------cceEEeCCEEEEEEeccCceEEEEEeCCCCcceEec
Confidence 23455655544 55655522111 11 13444567777776433 46788887776655553
No 310
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=62.70 E-value=67 Score=26.81 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=55.5
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCce-ecCC--CCCCC--cceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSW-SSGM--RMNAP--RCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSET 250 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t 250 (433)
++++|+|-|. .+|+|+..+-.- +.+. .+|.. ....+....++++|+|-| +..|+||..+
T Consensus 64 ~~~~yfFkG~--------~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~ 127 (195)
T 1itv_A 64 SKKLFFFSGR--------QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKA 127 (195)
T ss_dssp TCCEEEEETT--------EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTT
T ss_pred CCeEEEEeCC--------EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCc
Confidence 6789999775 578887542110 1111 12321 223333333689999955 3578999877
Q ss_pred CCeEE-----c----CCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCc
Q 013929 251 QTWKV-----L----PSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 251 ~~W~~-----~----~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
++=.. + +.+| ..--++...+|.+|.+-|.. .+.||..+..
T Consensus 128 ~~~~~gyPr~i~~~w~Gvp--~~idaa~~~~g~~Yffkg~~---------y~~~~~~~~~ 176 (195)
T 1itv_A 128 QMVDPRSASEVDRMFPGVP--LDTHDVFQFREKAYFCQDRF---------YWRVSSRSEL 176 (195)
T ss_dssp TEECGGGCEEHHHHSTTSC--SSCSEEEEETTEEEEEETTE---------EEEEECCTTC
T ss_pred ccccCCCccChhhcCCCCC--CCCCEEEEeCCeEEEEeCCE---------EEEEECCccE
Confidence 53211 1 1122 12234555689999996643 5778887664
No 311
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=62.22 E-value=1.4e+02 Score=30.24 Aligned_cols=184 Identities=10% Similarity=-0.008 Sum_probs=91.6
Q ss_pred eeEEEEEcCCCceecCCCCCCCcceeeEEEeCC-EEEEEccCCCC------CCcCCceEEEeCCCCCe--EEcCCCCC--
Q 013929 193 HVIYRYSILTNSWSSGMRMNAPRCLFGSASLGE-IAILAGGSDLE------GNILSSAEMYNSETQTW--KVLPSMKN-- 261 (433)
Q Consensus 193 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~------~~~~~~~~~yd~~t~~W--~~~~~~p~-- 261 (433)
..++++|..+++..... ++..+.....-+ ++ .||+....... ......+++++..+..= ..+-..+.
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred EEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 47999999999875431 111111122233 55 45544322110 02345688888776542 12222222
Q ss_pred CCcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCC--ceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEE
Q 013929 262 PRKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETE--TWTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNEL 338 (433)
Q Consensus 262 ~r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (433)
+....+.. .-+|+..++....+. ..+.++.+|+.+. .|..+..-...... .+...++.+
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~---~~~~i~~~d~~~~~~~~~~l~~~~~~~~~---------------~~~~~g~~l 294 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANST---SGNRLYVKDLSQENAPLLTVQGDLDADVS---------------LVDNKGSTL 294 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSS---SCCEEEEEETTSTTCCCEEEECSSSSCEE---------------EEEEETTEE
T ss_pred CeEEEEEEEcCCCCEEEEEEccCC---CCcEEEEEECCCCCCceEEEeCCCCceEE---------------EEeccCCEE
Confidence 22222222 335654444322211 2257899998766 67776432211111 133457889
Q ss_pred EEEecC---CCeEEEEeCCCC---cEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 339 YAADYA---DMEVRKYDKERR---LWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 339 y~~gg~---~~~i~~yd~~~~---~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
|++... ...|+.+|..+. .|+.+.+-.... ..+...++.|++..-. ++...+.+|+++
T Consensus 295 ~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-------~~~s~~g~~lv~~~~~----~g~~~l~~~d~~ 358 (693)
T 3iuj_A 295 YLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-------LTVHSGSGYLFAEYMV----DATARVEQFDYE 358 (693)
T ss_dssp EEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-------EEEEEETTEEEEEEEE----TTEEEEEEECTT
T ss_pred EEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-------EEEEEECCEEEEEEEE----CCeeEEEEEECC
Confidence 988642 468999998764 488764322211 2344456666655432 233445555553
No 312
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=62.15 E-value=99 Score=28.57 Aligned_cols=99 Identities=9% Similarity=-0.021 Sum_probs=48.9
Q ss_pred eEEEEecCCCcEEeCCCCCCccccccCCceEEEE-CCEEEEECCCCC---CcccceeEEEEEcCCCcee-cCCCCC-CCc
Q 013929 142 EWEAFDPIRRRWMHLPRMTSNECFMCSDKESLAV-GTELLVFGRELT---AHHISHVIYRYSILTNSWS-SGMRMN-APR 215 (433)
Q Consensus 142 ~~~~yd~~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~iyv~GG~~~---~~~~~~~~~~yd~~t~~W~-~~~~~p-~~r 215 (433)
.+.+||+.+.+-. ..+|.... .+-.+.- +..+|+..-... .....+.+.+||+.+.+-. .++ ++ .+|
T Consensus 48 ~v~v~D~~t~~~~--~~i~~g~~----p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~-~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGSGSIL--GHVNGGFL----PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE-LPDAPR 120 (373)
T ss_pred EEEEEECCCCeEE--EEecCCCC----CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE-CCCccc
Confidence 6788999876642 22332211 1111222 457888752110 0113456889999876532 221 11 111
Q ss_pred -----ceeeEEE--eCCEEEEEccCCCCCCcCCceEEEeCCCCCe
Q 013929 216 -----CLFGSAS--LGEIAILAGGSDLEGNILSSAEMYNSETQTW 253 (433)
Q Consensus 216 -----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 253 (433)
.....+. -+.+||+..-. ..+.+.++| .+++-
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~-----~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFA-----AGPAVGLVV-QGGSS 159 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecC-----CCCeEEEEE-CCCCE
Confidence 1112222 35578887311 135699999 87754
No 313
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=61.28 E-value=1e+02 Score=28.46 Aligned_cols=67 Identities=12% Similarity=0.109 Sum_probs=35.5
Q ss_pred CCEEEEEecCCCeEEEEeCCCC--cEEEeccCCCcccCCCcccEEEEEe-CC-EEEEEcCCCCCCCCeeEEEEeecCC
Q 013929 335 NNELYAADYADMEVRKYDKERR--LWFTIGRLPERANSMNGWGLAFRAC-GD-RLIVIGGPKASGEGFIELNSWVPSE 408 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~--~W~~v~~lp~~~~~~~~~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~~~~~~ 408 (433)
++.+++.| ..+.|.+||..+. .+..+...+.....+...-.+++.. ++ .+++.|+.++ .+.+|+...
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd~~~ 258 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG------TIRLCDMRA 258 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS------CEEEEETTT
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC------eEEEEECcC
Confidence 56667777 7889999999832 3333321121111111111333333 34 6778887643 367777754
No 314
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=58.44 E-value=1.7e+02 Score=30.21 Aligned_cols=267 Identities=12% Similarity=0.115 Sum_probs=119.7
Q ss_pred EEEEeeccceEEEEecCCCcEEeCCCCCCccc-cccCCceEEEE---CCEEEEECCCCCCcccceeEEEEEcCCCceecC
Q 013929 133 WVYFSCHLLEWEAFDPIRRRWMHLPRMTSNEC-FMCSDKESLAV---GTELLVFGRELTAHHISHVIYRYSILTNSWSSG 208 (433)
Q Consensus 133 ~l~~~~~~~~~~~yd~~~~~W~~l~~~p~~~~-~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 208 (433)
.+|+.....-++.-+-.-.+|..+...+.+.. ....-..++.. .+.+|+..|..... ....+++=+-.-.+|+++
T Consensus 29 ~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~-~~~~v~~S~DgG~TW~~~ 107 (789)
T 1sqj_A 29 LLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD-EWAAFYVSEDRGQSFTIY 107 (789)
T ss_dssp CEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS-SCCEEEEESSTTSEEEEE
T ss_pred EEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCC-cccEEEEECCCCCcceec
Confidence 34444444445666666688999865332110 00011122222 24788876542100 012344433334579876
Q ss_pred CC-CC-----CCc-ceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCC---CCcceeEEEE----
Q 013929 209 MR-MN-----APR-CLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKN---PRKMCSGVFM---- 271 (433)
Q Consensus 209 ~~-~p-----~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~---~r~~~~~~~~---- 271 (433)
.. ++ ..| ..+.+++. .+.||+. ... ..+++=+=.-.+|+.+..+|. .-.....+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~------~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~ 180 (789)
T 1sqj_A 108 ESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRT------EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPER 180 (789)
T ss_dssp ECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSS------SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTS
T ss_pred cCCcccCccCCCccceeEEEEcCCCCCEEEEE-ecc------CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCC
Confidence 42 11 112 22344443 3466663 211 223333323457999876442 1122333333
Q ss_pred CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCCCCCCCCCCcCC--CCcCCC-CEEEEE--CCEEEEEe----
Q 013929 272 DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPARGGAARGTEMP--ASAEAP-PLVAVV--NNELYAAD---- 342 (433)
Q Consensus 272 ~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~--~~~~~~-~~~~~~--~~~ly~~g---- 342 (433)
.+.+|+..... ..+++=.-.-.+|+.+..++....... .+..+ ...... ..+++. ++.||+..
T Consensus 181 ~~~~~~~~~~~-------~~v~~S~DgG~TW~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~ 252 (789)
T 1sqj_A 181 NGTIYASATAP-------QGMYVTHDGGVSWEPVAGQPSSWLNRT-TGAFPDKKPASIAPQPMKVALTPNFLYVTYADYP 252 (789)
T ss_dssp TTCEEEEESST-------TCEEEESSTTSSCEECTTCCCSCCHHH-HHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSC
T ss_pred CCEEEEEEcCC-------CeEEEEcCCCcCcccCCCCcCcccccc-ccccCcccccccccceeEEcCCCCeEEEEEecCC
Confidence 24677654321 112221112347999875443210000 00000 000000 122222 78999873
Q ss_pred ----cCCCeEEEEeCCCCcEEEeccCCCccc--C--CCcc---c-EEEEEe---CCEEEEEcCCCCCCCCeeEEEEeecC
Q 013929 343 ----YADMEVRKYDKERRLWFTIGRLPERAN--S--MNGW---G-LAFRAC---GDRLIVIGGPKASGEGFIELNSWVPS 407 (433)
Q Consensus 343 ----g~~~~i~~yd~~~~~W~~v~~lp~~~~--~--~~~~---~-~~~~~~---~~~l~v~GG~~~~~~~~~~~~~~~~~ 407 (433)
+....|++.+-...+|+++...|.... . ...+ + ..++.. .+.||+.+...... .....+|.-.
T Consensus 253 ~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~--~~~~~l~~S~ 330 (789)
T 1sqj_A 253 GPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPG--PALDSIYLST 330 (789)
T ss_dssp SSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSC--SSCCCEEEES
T ss_pred CCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCC--cccccEEEec
Confidence 356789999988999999986544210 0 0001 2 233332 35677776432110 0012244444
Q ss_pred CCCCCceEec
Q 013929 408 EGPPQWNLLA 417 (433)
Q Consensus 408 ~~~~~W~~v~ 417 (433)
..-.+|+.+.
T Consensus 331 DgG~tW~~~~ 340 (789)
T 1sqj_A 331 DAGATWKDVT 340 (789)
T ss_dssp STTSSEEEHH
T ss_pred CCCCCceeCc
Confidence 4567898886
No 315
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=58.43 E-value=87 Score=26.72 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=30.5
Q ss_pred CCEEEEEecCCCeEEEEeCCCC---cEEEeccCCCcccCCCcccEEEEE-----------eCCEEEEEcCC
Q 013929 335 NNELYAADYADMEVRKYDKERR---LWFTIGRLPERANSMNGWGLAFRA-----------CGDRLIVIGGP 391 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~---~W~~v~~lp~~~~~~~~~~~~~~~-----------~~~~l~v~GG~ 391 (433)
++++|++-| +..|+||..+. .|...+.+|.... +++.. .++.+|+|-|.
T Consensus 126 ~gk~yfFkG--~~ywr~d~~~~P~~i~~~~~g~p~~vd------Aa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 126 SSRLHIMAG--RRLWWLDLKSGAQATWTELPWPHEKVD------GALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp CCEEEEEET--TEEEEEEGGGGGGCCCEEECCSCSCCS------EEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred CCEEEEEeC--CEEEEEeCCCCceEhhhcCCCCCCCcC------EEEEccccccccceeccCCeEEEEECC
Confidence 589999954 67899997542 4544444433331 44431 34679998875
No 316
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=58.27 E-value=1.1e+02 Score=27.67 Aligned_cols=123 Identities=12% Similarity=0.070 Sum_probs=63.1
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCC-C---CCcceeEEEE--CCEEEEEccccCCCCcccceEEEEEC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMK-N---PRKMCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDL 297 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~---~r~~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~ 297 (433)
+++|||.......+. ..++.++ +.+-...+... . .......+.+ +|+||++.-.. .......+.+||+
T Consensus 27 ~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~--~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGN--QSKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHH--HHTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCC--CcCCCCeEEEEEC
Confidence 678988742211111 4677777 44444333211 1 1112223333 48999984210 0001246899999
Q ss_pred CCCceEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEec---CCCeEEEEeCCCC-cEEEe
Q 013929 298 ETETWTEIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADY---ADMEVRKYDKERR-LWFTI 361 (433)
Q Consensus 298 ~t~~W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg---~~~~i~~yd~~~~-~W~~v 361 (433)
.+++-...-.++...... ......+++. ++.+|+... ....|.+||+.++ .|+.+
T Consensus 101 ~tg~~~~~~~~~~~~~~~---------~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLS---------NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TTTEEEEEEECCTTTSCT---------TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred CCCeEEEEEECChhhccc---------ccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 988733221122110000 0011245555 579999875 5678999999865 46655
No 317
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=56.45 E-value=1.4e+02 Score=28.64 Aligned_cols=30 Identities=27% Similarity=0.290 Sum_probs=20.0
Q ss_pred CCEEEEEecCCCeEEEEeCC-CCcEEEeccC
Q 013929 335 NNELYAADYADMEVRKYDKE-RRLWFTIGRL 364 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~-~~~W~~v~~l 364 (433)
+..||+-....++|.+||.. ..+.+.+..+
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 45688876667899999985 3345544433
No 318
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=56.37 E-value=1.2e+02 Score=27.55 Aligned_cols=23 Identities=9% Similarity=0.049 Sum_probs=15.6
Q ss_pred CCEEEEEecCCCeEEEEeCCCCc
Q 013929 335 NNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
++.||+.+...+.|.+|+...+.
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETTE
T ss_pred CCEEEEEEcCCCeEEEEEEchhh
Confidence 45677665556788888776653
No 319
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=52.97 E-value=1.9e+02 Score=28.87 Aligned_cols=110 Identities=7% Similarity=-0.039 Sum_probs=59.6
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcC-CCCCC-CcceeEE-EECCEEEEEccccCCCCcccceEEEEECCCC
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLP-SMKNP-RKMCSGV-FMDGKFYVIGGIGGSDSKVLTCGEEYDLETE 300 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~~p~~-r~~~~~~-~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~ 300 (433)
+|+..+.++.++ .+.+||..+ .+..+. .++.+ +..++++ .-+|++.+.||.++ .+..||+.++
T Consensus 96 dG~~LAs~s~dg------~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG-------tVkIWd~~~~ 161 (588)
T 2j04_A 96 IDDWMAVLSNNG------NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG-------ELQFFSIRKN 161 (588)
T ss_dssp SSSCEEEEETTS------CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS-------EEEEEECCCC
T ss_pred CCCEEEEEeCCC------cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC-------EEEEEECCCC
Confidence 666666666443 366777443 344333 22222 2333333 34788888888763 5788999886
Q ss_pred ce-----EecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEecCCCeEEEEeCCCCc
Q 013929 301 TW-----TEIPNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 301 ~W-----~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.- -.+..+.....+|. .+-.+++...+. ++.++..+.+..||..++.
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~---------~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSK---------DWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCC---------CCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred ccccccceeeeeeeccccccc---------ccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 31 01111111111120 000134455555 6777788999999998766
No 320
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=52.32 E-value=80 Score=31.54 Aligned_cols=74 Identities=11% Similarity=0.207 Sum_probs=46.6
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEe----CCEEEEEccCCC----C-------CCcC
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASL----GEIAILAGGSDL----E-------GNIL 240 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~----~-------~~~~ 240 (433)
+..+||.-. ..+.+.+.|+.+.+=.++-.+|.....|.++.. +++||+.+.+.. + ..+.
T Consensus 101 G~~lfVnd~------~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 101 GRFLFMNDK------ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEET------TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCEEEEEcC------CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 446777532 345689999999875544356665666776653 568888864311 1 1234
Q ss_pred CceEEEeCCCCC--eEE
Q 013929 241 SSAEMYNSETQT--WKV 255 (433)
Q Consensus 241 ~~~~~yd~~t~~--W~~ 255 (433)
+.+-+.|..+.+ |+.
T Consensus 175 ~~vtvID~~t~~v~~qI 191 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQV 191 (595)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCeEEEEE
Confidence 568889999864 553
No 321
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=51.78 E-value=1e+02 Score=30.97 Aligned_cols=104 Identities=8% Similarity=-0.162 Sum_probs=51.1
Q ss_pred eEEEEEcCCCceecCCCCCCC---cceeeEEEeCCEEEEEccCCCCC---CcCCceEEEeCCCCCeEEcCCCCCCC--cc
Q 013929 194 VIYRYSILTNSWSSGMRMNAP---RCLFGSASLGEIAILAGGSDLEG---NILSSAEMYNSETQTWKVLPSMKNPR--KM 265 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~~~p~~---r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~~yd~~t~~W~~~~~~p~~r--~~ 265 (433)
.++++|+.+++-..+-..... .......+-+++.++++..+... .....++++|..+++-+.+....... ..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 578888888765433221111 11112222356555555433211 12478999999988766665432211 11
Q ss_pred eeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEec
Q 013929 266 CSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI 305 (433)
Q Consensus 266 ~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~ 305 (433)
.....-+|+..+++.. ..++++|..++.-..+
T Consensus 118 ~~~~SPdG~~la~~~~--------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE--------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp BCCBCSSTTCEEEEET--------TEEEEESSSSSCCEEE
T ss_pred ccEECCCCCEEEEEEC--------CeEEEEECCCCceEEE
Confidence 1111224544343321 2467777776655444
No 322
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=51.12 E-value=11 Score=23.23 Aligned_cols=27 Identities=15% Similarity=0.032 Sum_probs=20.2
Q ss_pred CCCCCCCCCCCCchhHHHhhccccCcc
Q 013929 73 HSSDLDSLIQPIGRDNSISCLIRCSRS 99 (433)
Q Consensus 73 ~~~~~~~~~~~LP~dl~~~iL~rlP~~ 99 (433)
.+..++..+..||.|+.+++|+--.+.
T Consensus 13 P~~VD~eVF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 13 PEGVDQEVFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp CTTCCGGGTTTSCHHHHHHHTTCCCSC
T ss_pred CCCCCHHHHHHCcHHHHHHHHhcchHH
Confidence 345566778899999999999865543
No 323
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=50.31 E-value=1.1e+02 Score=29.41 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=55.7
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCc--e-e------cCCCCCCCcceeeEEEe-CCEEEEEccCCCCCCcCCceEE
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNS--W-S------SGMRMNAPRCLFGSASL-GEIAILAGGSDLEGNILSSAEM 245 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~------~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 245 (433)
++++|+|-|. .+|+|+..+-. + + -+|.++. ....+.... ++++|+|-| +..|+
T Consensus 318 ~g~~~fFKg~--------~~W~~~~~~~~~gyP~~i~~~~g~P~~~~-~IDAA~~~~~~~k~yfFkG--------~~yw~ 380 (450)
T 1su3_A 318 RDEVRFFKGN--------KYWAVQGQNVLHGYPKDIYSSFGFPRTVK-HIDAALSEENTGKTYFFVA--------NKYWR 380 (450)
T ss_dssp GTEEEEEETT--------EEEEEETTEECTTCSEEHHHHHCCCTTCC-CCCEEEEETTTTEEEEEET--------TEEEE
T ss_pred CCeEEEEeCC--------EEEEecCCcccCCCceeeehhhcCCCCCC-ccceEEEEcCCCeEEEEeC--------CEEEE
Confidence 6899999765 57888754311 0 0 1222221 122222222 689999954 46889
Q ss_pred EeCCCCCeEE-----c----CCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceE
Q 013929 246 YNSETQTWKV-----L----PSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWT 303 (433)
Q Consensus 246 yd~~t~~W~~-----~----~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~ 303 (433)
||..+++-.. + +.+| ..--++...+|++|+|-|.. .++||..+.+=.
T Consensus 381 yd~~~~~~~~gYPk~I~~~fpgip--~~iDAA~~~~g~~YFFkg~~---------ywr~d~~~~~v~ 436 (450)
T 1su3_A 381 YDEYKRSMDPGYPKMIAHDFPGIG--HKVDAVFMKDGFFYFFHGTR---------QYKFDPKTKRIL 436 (450)
T ss_dssp EETTTTEECSSCSEEHHHHSTTSC--SCCSEEEEETTEEEEEETTE---------EEEEETTTTEEE
T ss_pred EeCCCccccCCCCcchhhcCCCCC--CCccEEEEcCCeEEEEeCCE---------EEEEECCcceEe
Confidence 9877543211 1 1122 12224445789999996643 588888776543
No 324
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=47.59 E-value=81 Score=30.75 Aligned_cols=107 Identities=12% Similarity=0.075 Sum_probs=61.3
Q ss_pred CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCCCCCCCc--ceeEEE--------ECC-EEEEEccccCCCCcccceE
Q 013929 224 GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPSMKNPRK--MCSGVF--------MDG-KFYVIGGIGGSDSKVLTCG 292 (433)
Q Consensus 224 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~--~~~~~~--------~~g-~lyv~GG~~~~~~~~~~~v 292 (433)
++.|||+-.. ...+.++|+.++.-+.+........ ....++ .+| .||+.--..+. ......+
T Consensus 151 ~~~Lyv~~~~------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~~~~~~V 223 (496)
T 3kya_A 151 KDHLYICYDG------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-GDESPSV 223 (496)
T ss_dssp EEEEEEEEET------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-GGGEEEE
T ss_pred CCEEEEEECC------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-cccCceE
Confidence 4689998431 2468999999998887655433221 122333 244 47877322210 0123457
Q ss_pred EEEECCC-CceE------ecCCCCCCCCCCCCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCC
Q 013929 293 EEYDLET-ETWT------EIPNMSPARGGAARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKE 354 (433)
Q Consensus 293 ~~yd~~t-~~W~------~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~ 354 (433)
..++... +.|. .++.. ... ..+++. ++.||+.....+.|++||++
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~---~~p--------------~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAY---KQC--------------NGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEE---SCC--------------CCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEecCCCCceeecccceeeccC---CCc--------------eEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 7787554 3553 22211 111 134443 57899998778889999997
No 325
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=46.98 E-value=2.3e+02 Score=28.39 Aligned_cols=17 Identities=6% Similarity=-0.066 Sum_probs=12.9
Q ss_pred CeEEEEeCCCCcEEEec
Q 013929 346 MEVRKYDKERRLWFTIG 362 (433)
Q Consensus 346 ~~i~~yd~~~~~W~~v~ 362 (433)
..++.+|..+++.+.+.
T Consensus 337 ~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 337 KHIHYIKDTVENAIQIT 353 (719)
T ss_dssp EEEEEESSCSTTCEECS
T ss_pred eEEEEEECCCCceEecc
Confidence 47899999888766554
No 326
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=43.72 E-value=72 Score=32.15 Aligned_cols=148 Identities=15% Similarity=0.145 Sum_probs=71.9
Q ss_pred eEEEECCEEEEECCCCCCcccceeEEEEEcCCC----------ceecCCCCCCCcceeeEEE-eCCEEEEEccCCCCCCc
Q 013929 171 ESLAVGTELLVFGRELTAHHISHVIYRYSILTN----------SWSSGMRMNAPRCLFGSAS-LGEIAILAGGSDLEGNI 239 (433)
Q Consensus 171 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~----------~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 239 (433)
++....+++|+|-|. .+|+++.... .|.. +|.. ...+... .++++|+|-|
T Consensus 448 Ait~~rg~~yfFKg~--------~yWr~~~~~~~~~~P~~Is~~wp~---LP~~-IDAA~~~~~~~k~yFFkG------- 508 (631)
T 1ck7_A 448 GIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPE---LPEK-IDAVYEAPQEEKAVFFAG------- 508 (631)
T ss_dssp EEEECSSSEEEECSS--------EEEEESCTTSCCEEEEEGGGTCTT---SCSS-CSBCCEETTTTEEEEEET-------
T ss_pred eeEecCCcEEEEcCC--------EEEEEcCCCCCCCCceeccccCCC---CCcc-ceEEEEECCCCEEEEEec-------
Confidence 455668899999765 4677765432 2333 3321 1122112 2678999854
Q ss_pred CCceEEEeCCCC--Ce-EEcCC--CCCCCcceeEEE---ECCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCC
Q 013929 240 LSSAEMYNSETQ--TW-KVLPS--MKNPRKMCSGVF---MDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPA 311 (433)
Q Consensus 240 ~~~~~~yd~~t~--~W-~~~~~--~p~~r~~~~~~~---~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~ 311 (433)
+..|+|+..+- .+ +.+.. +|.....--+|. .++++|+|-|. ..++||..+++=. +.-|..
T Consensus 509 -~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~---------~ywryd~~~~~vd--~gYPk~ 576 (631)
T 1ck7_A 509 -NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRYNEVKKKMD--PGFPKL 576 (631)
T ss_dssp -TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT---------EEEEEETTTTEEC--TTCCEE
T ss_pred -CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC---------EEEEEcCCccccc--CCCCcc
Confidence 45778875310 01 11111 121101112222 36899999663 3688998765311 111111
Q ss_pred CC-CCCCCCcCCCCcCCCCEEEEEC--CEEEEEecCCCeEEEEeCCCCc
Q 013929 312 RG-GAARGTEMPASAEAPPLVAVVN--NELYAADYADMEVRKYDKERRL 357 (433)
Q Consensus 312 r~-~~~~~~~~~~~~~~~~~~~~~~--~~ly~~gg~~~~i~~yd~~~~~ 357 (433)
.. ...... ..-.++...+ +++|++-| +..|+||..+..
T Consensus 577 i~~~w~G~p------~~iDAAf~~~~~g~~YFFkG--~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 577 IADAWNAIP------DNLDAVVDLQGGGHSYFFKG--AYYLKLENQSLK 617 (631)
T ss_dssp TTTSCSSCC------TTCCEEECCTTSCBCEEEET--TEEECCBTTBTT
T ss_pred hHhhcCCCC------CCCcEeEEEcCCCeEEEEEC--CEEEEEeCccce
Confidence 00 000000 0001344433 79999844 678888876543
No 327
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=43.61 E-value=2.8e+02 Score=28.28 Aligned_cols=148 Identities=13% Similarity=0.016 Sum_probs=80.0
Q ss_pred eeEEEEEcCC--CceecCCCCCCCcceeeEEEeCCEEEEEccCCCC----CCcCCceEEEeCCC--------CCeEE-cC
Q 013929 193 HVIYRYSILT--NSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLE----GNILSSAEMYNSET--------QTWKV-LP 257 (433)
Q Consensus 193 ~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~~yd~~t--------~~W~~-~~ 257 (433)
+.+++.|... ++|.++ ..++........++++|+....+-. .-....+...|..+ ..|+. ++
T Consensus 269 ~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI---NMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEEC---CSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEe---ecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 5567666543 567666 2233222245668999997643310 01245678888664 36887 43
Q ss_pred CCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEec--CCCCCCCCCCCCCCcCCCCcCCCCEEEEE-
Q 013929 258 SMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEI--PNMSPARGGAARGTEMPASAEAPPLVAVV- 334 (433)
Q Consensus 258 ~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~r~~~~~~~~~~~~~~~~~~~~~~- 334 (433)
+-. .+.--.....++.+++..-.+ ....+.++|+.++.|... -.+|.. +. ......
T Consensus 346 ~~~-~~~l~~~~~~~~~l~~~~~~~-----~~~~l~~~~~~~g~~~~~~~i~lp~~--~~-------------~~~~~~~ 404 (711)
T 4hvt_A 346 PTA-NEVFNFISTTKDRVFLATYDN-----VVAKVVTFTLENEQWTKPVVLKLPYQ--NA-------------IFGMSSY 404 (711)
T ss_dssp CCT-TEEEEEEEECSSCEEEEEEET-----TEEEEEEECEETTEECCCEEECCCST--TC-------------EEEEECC
T ss_pred CCC-CCeEEEEEEECCEEEEEEEEC-----CEEEEEEEECCCCceEEEeccCCCCC--eE-------------EEEEeec
Confidence 322 222234445667777764333 344678899888887432 123321 11 011111
Q ss_pred --CCEEEEE-ec--CCCeEEEEeCCCCcEEEeccCC
Q 013929 335 --NNELYAA-DY--ADMEVRKYDKERRLWFTIGRLP 365 (433)
Q Consensus 335 --~~~ly~~-gg--~~~~i~~yd~~~~~W~~v~~lp 365 (433)
++.+++. .+ ....++.||.. ++++.+...+
T Consensus 405 ~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 405 EEEEEALITIENSIVPPTIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp TTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCS
T ss_pred CcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCC
Confidence 2344443 33 34789999988 7787776443
No 328
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=38.69 E-value=2.4e+02 Score=26.04 Aligned_cols=104 Identities=13% Similarity=0.040 Sum_probs=57.1
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCc--e-ecCCC--CCCCc-ceeeEEEe--CCEEEEEccCCCCCCcCCceEEEe
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNS--W-SSGMR--MNAPR-CLFGSASL--GEIAILAGGSDLEGNILSSAEMYN 247 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~~~--~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd 247 (433)
++++|+|-|. .+|+|+..+-. + +.+.. +|..- .--++... ++++|+|-| +..|+||
T Consensus 236 ~g~~~fFkg~--------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd 299 (365)
T 3ba0_A 236 RNQVFLFKDD--------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYD 299 (365)
T ss_dssp GTEEEEEETT--------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEE
T ss_pred CCEEEEEeCC--------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEe
Confidence 7899999764 57888764321 1 12322 23211 11122222 579999954 4578999
Q ss_pred CCCCCeEEcCC------C-CCCCcceeEEEE-CCEEEEEccccCCCCcccceEEEEECCCCceEe
Q 013929 248 SETQTWKVLPS------M-KNPRKMCSGVFM-DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE 304 (433)
Q Consensus 248 ~~t~~W~~~~~------~-p~~r~~~~~~~~-~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~ 304 (433)
..+++-..--+ . ..+..--++... +|++|.|-|. ..++||..+.+-..
T Consensus 300 ~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg~---------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 300 ERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGS---------NQFEYDFLLQRITK 355 (365)
T ss_dssp TTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEETT---------EEEEEETTTTEEEE
T ss_pred CCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeCC---------EEEEEECCccEEec
Confidence 87654221101 0 111112234444 8999999653 36889988776543
No 329
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=37.87 E-value=1.7e+02 Score=24.21 Aligned_cols=102 Identities=8% Similarity=-0.018 Sum_probs=54.6
Q ss_pred ECCEEEEECCCCCCcccceeEEEEEcCCCce---ecC----CCCCCCcceeeEEE-eCCEEEEEccCCCCCCcCCceEEE
Q 013929 175 VGTELLVFGRELTAHHISHVIYRYSILTNSW---SSG----MRMNAPRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMY 246 (433)
Q Consensus 175 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W---~~~----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 246 (433)
.++++|+|-|. .+|+|+..+... +.+ +.+|......+... .++++|+|-| +..++|
T Consensus 60 ~~g~~yfFkg~--------~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG--------~~yw~y 123 (196)
T 3c7x_A 60 KDGKFVFFKGD--------KHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG--------NKYYRF 123 (196)
T ss_dssp TTSCEEEEETT--------EEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET--------TEEEEE
T ss_pred CCCcEEEecCC--------EEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC--------CEEEEE
Confidence 36789999764 578888643211 112 22442222222222 2689999955 457889
Q ss_pred eCCCCCeEE-----cCCC-CCCCcceeEEEE-CC-EEEEEccccCCCCcccceEEEEECCCCc
Q 013929 247 NSETQTWKV-----LPSM-KNPRKMCSGVFM-DG-KFYVIGGIGGSDSKVLTCGEEYDLETET 301 (433)
Q Consensus 247 d~~t~~W~~-----~~~~-p~~r~~~~~~~~-~g-~lyv~GG~~~~~~~~~~~v~~yd~~t~~ 301 (433)
|..+++-.. +... ..+..--++... ++ ++|++-|.. .++||..+.+
T Consensus 124 d~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg~~---------y~r~d~~~~~ 177 (196)
T 3c7x_A 124 NEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNK---------YWKFNNQKLK 177 (196)
T ss_dssp ETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEETTE---------EEEEETTTTE
T ss_pred eCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEECCE---------EEEEECCcce
Confidence 987653211 1111 111111223333 44 899996643 5889987764
No 330
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=37.01 E-value=2.8e+02 Score=26.31 Aligned_cols=127 Identities=15% Similarity=0.249 Sum_probs=72.6
Q ss_pred CCCeEE--cCCCCCCCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCceEecC-----CCCCCCCCCCCCCcCC
Q 013929 250 TQTWKV--LPSMKNPRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIP-----NMSPARGGAARGTEMP 322 (433)
Q Consensus 250 t~~W~~--~~~~p~~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~-----~~p~~r~~~~~~~~~~ 322 (433)
...|+. ++.+|....-|+.+.+++.-|.+|=.+|+-....-.+..| .+.|.... .+|..-...
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yf---s~~~~sp~~~vrr~i~sey~~~------- 338 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYF---PDAFNSPSNYVRRQIPSEYEPD------- 338 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEE---TTTTTCTTCCEEEECCGGGCTT-------
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEe---cccccCCcceeeeechhhhccc-------
Confidence 445743 5666666677889999998889887665443222222323 22222111 011111110
Q ss_pred CCcCCCCEEEEECCEEEEEe-c-----CCCeEEEEeCCCCcEEEeccCCCcccCCCcccEEEEEeCCEEEEEcCCCC
Q 013929 323 ASAEAPPLVAVVNNELYAAD-Y-----ADMEVRKYDKERRLWFTIGRLPERANSMNGWGLAFRACGDRLIVIGGPKA 393 (433)
Q Consensus 323 ~~~~~~~~~~~~~~~ly~~g-g-----~~~~i~~yd~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~l~v~GG~~~ 393 (433)
..-+++-.++|.||++. | ....+.+-+.....|..+. +|.... .-...++..++.||+||-+..
T Consensus 339 ---AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slr-fp~nvH---htnlPFakvgD~l~mFgsERA 408 (670)
T 3ju4_A 339 ---ASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLR-FPHNVH---HTTLPFAKVGDDLIMFGSERA 408 (670)
T ss_dssp ---EEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEE-CTTCCC---SSCCCEEEETTEEEEEEECSS
T ss_pred ---cccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhhee-cccccc---ccCCCcceeCCEEEEEecccc
Confidence 01135567899999984 2 1256778888888998875 232221 112456789999999996543
No 331
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=35.27 E-value=3.5e+02 Score=26.91 Aligned_cols=136 Identities=11% Similarity=0.012 Sum_probs=68.9
Q ss_pred eEEEEEcCCCceecCC-CCCC-CcceeeEEE-eCCEEEEEccCCCCCCcCCceEEEeCCCCC--------eEEcCC-CCC
Q 013929 194 VIYRYSILTNSWSSGM-RMNA-PRCLFGSAS-LGEIAILAGGSDLEGNILSSAEMYNSETQT--------WKVLPS-MKN 261 (433)
Q Consensus 194 ~~~~yd~~t~~W~~~~-~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--------W~~~~~-~p~ 261 (433)
.+.+||..+ .+..+. .++. .+..++++. .++++.+.||.+ ..+.+||..++. ...+.. ...
T Consensus 108 ~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~g 180 (588)
T 2j04_A 108 NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED------GELQFFSIRKNSENTPEFYFESSIRLSDAG 180 (588)
T ss_dssp CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT------SEEEEEECCCCTTTCCCCEEEEEEECSCTT
T ss_pred cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC------CEEEEEECCCCccccccceeeeeeeccccc
Confidence 356666332 333332 2221 233444433 377777777755 348889988763 122210 111
Q ss_pred -CCcceeEEEECCEEEEEccccCCCCcccceEEEEECCCCc----eEecCCCCCCCCCCCCCCcCCCCcCCCCEEEEECC
Q 013929 262 -PRKMCSGVFMDGKFYVIGGIGGSDSKVLTCGEEYDLETET----WTEIPNMSPARGGAARGTEMPASAEAPPLVAVVNN 336 (433)
Q Consensus 262 -~r~~~~~~~~~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~----W~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~ 336 (433)
.-.-.+.+...+. ++.++.+ +.+..+|+.++. |..+... .+... .+++..++
T Consensus 181 h~~~V~sVawSPdg-Laass~D-------~tVrlWd~~~~~~~~~~~tL~~~--h~~~V-------------~svaFsg~ 237 (588)
T 2j04_A 181 SKDWVTHIVWYEDV-LVAALSN-------NSVFSMTVSASSHQPVSRMIQNA--SRRKI-------------TDLKIVDY 237 (588)
T ss_dssp CCCCEEEEEEETTE-EEEEETT-------CCEEEECCCSSSSCCCEEEEECC--CSSCC-------------CCEEEETT
T ss_pred ccccEEEEEEcCCc-EEEEeCC-------CeEEEEECCCCccccceeeeccc--ccCcE-------------EEEEEECC
Confidence 1122344455555 6666654 357888887765 3333211 11111 12444454
Q ss_pred EEEEEecCCCeEEEEeCCCCcEEEe
Q 013929 337 ELYAADYADMEVRKYDKERRLWFTI 361 (433)
Q Consensus 337 ~ly~~gg~~~~i~~yd~~~~~W~~v 361 (433)
. .+.++ .+.|..||..++.=...
T Consensus 238 ~-LASa~-~~tIkLWd~~~~~~~~~ 260 (588)
T 2j04_A 238 K-VVLTC-PGYVHKIDLKNYSISSL 260 (588)
T ss_dssp E-EEEEC-SSEEEEEETTTTEEEEE
T ss_pred E-EEEEe-CCeEEEEECCCCeEEEE
Confidence 4 44444 58999999988776444
No 332
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=32.16 E-value=2.5e+02 Score=24.36 Aligned_cols=180 Identities=8% Similarity=-0.041 Sum_probs=0.0
Q ss_pred CCEEEEECCCCCCcccceeEEEEEcCCCceecCCCCCCCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeCCCCC--e
Q 013929 176 GTELLVFGRELTAHHISHVIYRYSILTNSWSSGMRMNAPRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNSETQT--W 253 (433)
Q Consensus 176 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W 253 (433)
++.+|++... ...++.+|+.-+.+++++--......--+..-++.++|. .+....+++|+...+. |
T Consensus 38 ~~~L~aV~d~------~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs------~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 38 SNTLFSTINK------PAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVIS------DERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp TTEEEEEEET------TEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEE------ETTTTEEEEEEECTTCCEE
T ss_pred CCEEEEEECC------CCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEE------ECCCCcEEEEEcCCCCeee
Q ss_pred E------EcCCCCCCCcceeEEE--ECCEEEEEccccCCCCcccceEEEEE--CCCCceEecCC----CCCCCCCCCCCC
Q 013929 254 K------VLPSMKNPRKMCSGVF--MDGKFYVIGGIGGSDSKVLTCGEEYD--LETETWTEIPN----MSPARGGAARGT 319 (433)
Q Consensus 254 ~------~~~~~p~~r~~~~~~~--~~g~lyv~GG~~~~~~~~~~~v~~yd--~~t~~W~~~~~----~p~~r~~~~~~~ 319 (433)
. .+...+.....-+.+. .++++|+. .......++.|+ +.+..-+.+.. -.......
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va------~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~---- 175 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFF------KEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV---- 175 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEE------EESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC----
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEE------ECcCCceEEEEcccccCCceeeecchhhccccccCCc----
Q ss_pred cCCCCcCCCCEEEEEC---CEEEEEecCCCeEEEEeCCCCcEEEeccCCCcccCC-----CcccEEEEEeCCEEEEEc
Q 013929 320 EMPASAEAPPLVAVVN---NELYAADYADMEVRKYDKERRLWFTIGRLPERANSM-----NGWGLAFRACGDRLIVIG 389 (433)
Q Consensus 320 ~~~~~~~~~~~~~~~~---~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~~~~-----~~~~~~~~~~~~~l~v~G 389 (433)
+.+.++ +++|++......+.++|...+ -...-.|....... ..-|.++.. +|+|||++
T Consensus 176 ----------S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvs 241 (255)
T 3qqz_A 176 ----------SGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVS 241 (255)
T ss_dssp ----------CEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEE
T ss_pred ----------eeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEc
No 333
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=30.98 E-value=3.1e+02 Score=25.11 Aligned_cols=143 Identities=10% Similarity=0.021 Sum_probs=76.0
Q ss_pred ceeEEEEEcCC--CceecCCCC---C--CCcceeeEEEeC---C--EEEEEccCCCCCCcCCceEEEeCCCCCeEEcCC-
Q 013929 192 SHVIYRYSILT--NSWSSGMRM---N--APRCLFGSASLG---E--IAILAGGSDLEGNILSSAEMYNSETQTWKVLPS- 258 (433)
Q Consensus 192 ~~~~~~yd~~t--~~W~~~~~~---p--~~r~~~~~~~~~---~--~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~- 258 (433)
...+++||+.+ .+-+++.-. + ..-.-|++.... + +|||+--... ...-.++.+|+.+.....+..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~--~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGS--SSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTT--CCEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCC--CCeEEEEEEECCCCEEEEEecc
Confidence 44688999874 344443211 1 123445665542 3 6888854321 112345666776666554433
Q ss_pred --CCCCCcceeEEEECCEEEEEcccc-CC---------CCcccceEEEEECCCCceEecC-CCCCCCCCCCCCCcCCCCc
Q 013929 259 --MKNPRKMCSGVFMDGKFYVIGGIG-GS---------DSKVLTCGEEYDLETETWTEIP-NMSPARGGAARGTEMPASA 325 (433)
Q Consensus 259 --~p~~r~~~~~~~~~g~lyv~GG~~-~~---------~~~~~~~v~~yd~~t~~W~~~~-~~p~~r~~~~~~~~~~~~~ 325 (433)
.+..+.+-..+.-+|.+|+-+..- .. .......++.||+. +.+.+. .+..+
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~p-------------- 223 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFA-------------- 223 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSE--------------
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCccc--------------
Confidence 233333445556789988864311 00 01123568888884 333332 11111
Q ss_pred CCCCEEEEE-C-CEEEEEecCCCeEEEEeCCC
Q 013929 326 EAPPLVAVV-N-NELYAADYADMEVRKYDKER 355 (433)
Q Consensus 326 ~~~~~~~~~-~-~~ly~~gg~~~~i~~yd~~~ 355 (433)
.+++.. + ..+|+.......|++||...
T Consensus 224 ---NGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 224 ---NGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ---EEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ---CcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 134443 3 48999887778999999763
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=29.89 E-value=48 Score=30.56 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=19.9
Q ss_pred CCEEEEEe-cCCCeEEEEeCCCCcEEE
Q 013929 335 NNELYAAD-YADMEVRKYDKERRLWFT 360 (433)
Q Consensus 335 ~~~ly~~g-g~~~~i~~yd~~~~~W~~ 360 (433)
++.+|++. ...+.++.||..++.|+.
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 56777775 467899999998887654
No 335
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=29.11 E-value=3.3e+02 Score=24.80 Aligned_cols=145 Identities=16% Similarity=0.112 Sum_probs=76.6
Q ss_pred ceeEEEEEcCCCceecC--CCC---CCCc-ceeeEEE----eCCEEEEEcc----CCCCC---CcCCceEEEeCC---CC
Q 013929 192 SHVIYRYSILTNSWSSG--MRM---NAPR-CLFGSAS----LGEIAILAGG----SDLEG---NILSSAEMYNSE---TQ 251 (433)
Q Consensus 192 ~~~~~~yd~~t~~W~~~--~~~---p~~r-~~~~~~~----~~~~iyv~GG----~~~~~---~~~~~~~~yd~~---t~ 251 (433)
...+.++||..+.-.++ +.+ -.+. ...++.. -.++|+|+.- ++..+ .....+.+||+. ++
T Consensus 34 ~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 34 KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 34688899986654333 221 1112 2234455 2578888621 11111 124668999988 44
Q ss_pred --CeEE-cCCCCC------C-Cc-ceeEEEE--CCEEEEEccccCCCCcccceEEEEECCCCc---eEecCCCCCCCCCC
Q 013929 252 --TWKV-LPSMKN------P-RK-MCSGVFM--DGKFYVIGGIGGSDSKVLTCGEEYDLETET---WTEIPNMSPARGGA 315 (433)
Q Consensus 252 --~W~~-~~~~p~------~-r~-~~~~~~~--~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~---W~~~~~~p~~r~~~ 315 (433)
.|.. ++.... + +. ..--+.+ +|++||.+... +..|+++++.... |-.-.+....+.+.
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~ 187 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG------MPAIARVSADGKTVSTFAWESGNGGQRPGY 187 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES------SCEEEEECTTSCCEEEEEECCCCSSSCCSC
T ss_pred CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC------CCeEEEEeCCCCEEeeeeecCCCcccccCc
Confidence 3543 211111 1 11 1222233 68999986543 1458889987543 54322222233332
Q ss_pred CCCCcCCCCcCCCCEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 013929 316 ARGTEMPASAEAPPLVAVV--NNELYAADYADMEVRKYDKERR 356 (433)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~--~~~ly~~gg~~~~i~~yd~~~~ 356 (433)
.+++.. ++.|++... .+.+++||..+.
T Consensus 188 -------------nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 188 -------------SGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp -------------SEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred -------------ceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 367777 446666666 889999998854
No 336
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=28.98 E-value=3.6e+02 Score=25.10 Aligned_cols=203 Identities=13% Similarity=0.107 Sum_probs=95.2
Q ss_pred CCEEEEEC-CCCC-----Cc---ccceeEEEEEcCCC--ceec---CC-CCCCCcceeeE-EEe---------CCEEEEE
Q 013929 176 GTELLVFG-RELT-----AH---HISHVIYRYSILTN--SWSS---GM-RMNAPRCLFGS-ASL---------GEIAILA 230 (433)
Q Consensus 176 ~~~iyv~G-G~~~-----~~---~~~~~~~~yd~~t~--~W~~---~~-~~p~~r~~~~~-~~~---------~~~iyv~ 230 (433)
.++|+|+- |... .. ....++.+||..|+ +-.+ +| +.-.+.+.+.- ++- ++.+|+.
T Consensus 97 ~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYIt 176 (381)
T 3q6k_A 97 CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYIT 176 (381)
T ss_dssp TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEE
T ss_pred CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEE
Confidence 57888883 3221 11 34557999999999 6432 22 22222333322 222 3567876
Q ss_pred ccCCCCCCcCCceEEEeCCCCC-eEEcCCCCCCCcceeEEEECCEEEEEc-cccCCC----CcccceEEEEECCCC-ceE
Q 013929 231 GGSDLEGNILSSAEMYNSETQT-WKVLPSMKNPRKMCSGVFMDGKFYVIG-GIGGSD----SKVLTCGEEYDLETE-TWT 303 (433)
Q Consensus 231 GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r~~~~~~~~~g~lyv~G-G~~~~~----~~~~~~v~~yd~~t~-~W~ 303 (433)
- .....+.+||..+++ |+...+...+- ......++|.-+-.. |..+-. ...-.....|.+-+. ..-
T Consensus 177 D------~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly 249 (381)
T 3q6k_A 177 N------FLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVY 249 (381)
T ss_dssp E------TTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEE
T ss_pred c------CCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEE
Confidence 2 124679999999875 88764322221 223334455444221 211100 000022334444433 233
Q ss_pred ecCC--CCCCCCCCCCCCcCCCCcCCCCE-EEEE---CCEEEEEecCCCeEEEEeCCC-----CcEEEeccCCCcccCCC
Q 013929 304 EIPN--MSPARGGAARGTEMPASAEAPPL-VAVV---NNELYAADYADMEVRKYDKER-----RLWFTIGRLPERANSMN 372 (433)
Q Consensus 304 ~~~~--~p~~r~~~~~~~~~~~~~~~~~~-~~~~---~~~ly~~gg~~~~i~~yd~~~-----~~W~~v~~lp~~~~~~~ 372 (433)
.++. +..+.... .+...-.......+ ..++ +|.||+.--..+.|.+|++.+ +....+..=+ ...
T Consensus 250 ~V~T~~L~~~~~~~-~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~--- 324 (381)
T 3q6k_A 250 SVNTKELKQKGGKL-NPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFV--- 324 (381)
T ss_dssp EEEHHHHSSTTCCC-CCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCC---
T ss_pred EEEHHHhhCcchhh-ceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-Ccc---
Confidence 3320 10000000 00000000000012 2333 478888777788999999987 3556665434 221
Q ss_pred cccEEEEE-eCCEEEEEcCC
Q 013929 373 GWGLAFRA-CGDRLIVIGGP 391 (433)
Q Consensus 373 ~~~~~~~~-~~~~l~v~GG~ 391 (433)
|-..+.. .++.||++-..
T Consensus 325 -~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 325 -FGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp -SEEEEEECTTSCEEEEECS
T ss_pred -ccCeEEECCCCeEEEEECc
Confidence 2233433 46788887643
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=28.77 E-value=99 Score=28.38 Aligned_cols=112 Identities=13% Similarity=-0.043 Sum_probs=55.9
Q ss_pred cEEEEeeccceEEEEecCCC--cEEeCCCCCCccccccCCceEEEECCEEEEECCCCCCcccceeEEEEEcCCCceecC-
Q 013929 132 HWVYFSCHLLEWEAFDPIRR--RWMHLPRMTSNECFMCSDKESLAVGTELLVFGRELTAHHISHVIYRYSILTNSWSSG- 208 (433)
Q Consensus 132 ~~l~~~~~~~~~~~yd~~~~--~W~~l~~~p~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~- 208 (433)
..+|+.+....++++|..+. .|+.-.....+... .... ....++.+|+.... ....++.||+.++.|+.-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~-~~~~-~~~~~~~~~vv~p~-----~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIE-IQEP-SRLETYETLIIEPF-----GDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEE-CCCS-CTTTSSEEEEECCS-----TTTEEEEEETTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEE-ecCC-ccccCCcEEEEEEC-----CCCEEEEEECCCCcEEeee
Confidence 35667777778899998774 58754330001000 0000 01125567766422 233588999888866421
Q ss_pred --CCC--CCC-cceeeEEE-------eCCEEEEEccCCCCCCcCCceEEEeCCCCC--eEEcC
Q 013929 209 --MRM--NAP-RCLFGSAS-------LGEIAILAGGSDLEGNILSSAEMYNSETQT--WKVLP 257 (433)
Q Consensus 209 --~~~--p~~-r~~~~~~~-------~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 257 (433)
+.+ -.| +.....++ .++.||+ |+. -..++.+|..+++ |+.-.
T Consensus 84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~-Gs~------~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYT-GSM------RTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EHHHHHTTCSEEEECC----------CCEEEEE-CEE------EEEEEEEETTTCCEEEEEST
T ss_pred ccccceeccccccCCCceeecccccccCCEEEE-Eec------CCEEEEEECCCCcEEEEEec
Confidence 111 011 11111122 4555554 432 3458888988876 76643
No 338
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=26.12 E-value=5.8e+02 Score=26.62 Aligned_cols=26 Identities=12% Similarity=-0.024 Sum_probs=21.5
Q ss_pred CCEEEEEecCCCeEEEEeCCCCcEEE
Q 013929 335 NNELYAADYADMEVRKYDKERRLWFT 360 (433)
Q Consensus 335 ~~~ly~~gg~~~~i~~yd~~~~~W~~ 360 (433)
++..++.|+..+.|..||..+++-..
T Consensus 222 dg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 222 NSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp TSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCeEEEEECCCCcEEE
Confidence 67788888889999999998876544
No 339
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.82 E-value=5.4e+02 Score=26.15 Aligned_cols=102 Identities=6% Similarity=0.040 Sum_probs=58.1
Q ss_pred CCceEEEeCCC--CCeEEcCCCCCCCcceeEEEECCEEEEEccccCC---CCcccceEEEEECCC--------CceEe-c
Q 013929 240 LSSAEMYNSET--QTWKVLPSMKNPRKMCSGVFMDGKFYVIGGIGGS---DSKVLTCGEEYDLET--------ETWTE-I 305 (433)
Q Consensus 240 ~~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~~g~lyv~GG~~~~---~~~~~~~v~~yd~~t--------~~W~~-~ 305 (433)
.+.++..|... ..|..+ .+| +........++++|+....+.. .......+.+.|+.+ ..|+. +
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NMP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CSC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEe-ecC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 36677777653 568777 223 3222245679999997533200 011334577888764 46886 4
Q ss_pred CCCCCCCCCCCCCCcCCCCcCCCCEEEEECCEEEEEec--CCCeEEEEeCCCCcEE
Q 013929 306 PNMSPARGGAARGTEMPASAEAPPLVAVVNNELYAADY--ADMEVRKYDKERRLWF 359 (433)
Q Consensus 306 ~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~ly~~gg--~~~~i~~yd~~~~~W~ 359 (433)
++-+...-. .+...++.|++..- ....+.++|+.++.|.
T Consensus 345 ~~~~~~~l~---------------~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 345 TPTANEVFN---------------FISTTKDRVFLATYDNVVAKVVTFTLENEQWT 385 (711)
T ss_dssp CCCTTEEEE---------------EEEECSSCEEEEEEETTEEEEEEECEETTEEC
T ss_pred CCCCCCeEE---------------EEEEECCEEEEEEEECCEEEEEEEECCCCceE
Confidence 432221111 35556677777542 2346889998888884
No 340
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=25.69 E-value=5.4e+02 Score=26.12 Aligned_cols=149 Identities=11% Similarity=0.046 Sum_probs=74.9
Q ss_pred cceEEEEecCCC--cE--EeCCCCCCccccccCCceEE-EECCEEEEECCCCCCcccceeEEEEEcCC-Cceec-CCCCC
Q 013929 140 LLEWEAFDPIRR--RW--MHLPRMTSNECFMCSDKESL-AVGTELLVFGRELTAHHISHVIYRYSILT-NSWSS-GMRMN 212 (433)
Q Consensus 140 ~~~~~~yd~~~~--~W--~~l~~~p~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~-~~~~p 212 (433)
..+++.+|..+. .+ ..+.+-.... ..... ..++.||+..... ......++++|..+ +.|+. +-+-.
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~-----~~s~~~~~g~~l~~~t~~~--~a~~~~L~~~d~~~~~~~~~~li~~~ 366 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKGV-----RYDVQMHGTSHLVILTNEG--GAVNHKLLIAPRGQPSDWSHVLVDHS 366 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTTC-----CEEEEEETTTEEEEEECTT--TCTTCEEEEEETTSTTCCCCEEECCC
T ss_pred CceEEEEECCCCCCCceeEEeecCCCCc-----eEEEeeeeCCEEEEEeCCC--CCCCcEEEEEcCCCcccceeeEECCC
Confidence 456788888764 45 5443211110 01111 2277888876432 01233688999876 68876 42211
Q ss_pred CCcceeeEEEeCCEEEEEccCCCCCCcCCceEEEeC-------CCCC-eEEcCCCCCCCcceeEEE-------ECC-EEE
Q 013929 213 APRCLFGSASLGEIAILAGGSDLEGNILSSAEMYNS-------ETQT-WKVLPSMKNPRKMCSGVF-------MDG-KFY 276 (433)
Q Consensus 213 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-------~t~~-W~~~~~~p~~r~~~~~~~-------~~g-~ly 276 (433)
...........++.|++..-.+ ....++++|+ .++. -+.++ ++.. .+.... .++ .++
T Consensus 367 ~~~~l~~~~~~~~~lv~~~~~~----g~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~--~~~~~~~~~~~~~~~~~~l~ 439 (751)
T 2xe4_A 367 EDVFMESIAVRSNYLVVAGRRA----GLTRIWTMMADSQDGVFKAGTGLREVV-MEEP--IFTVHLVESQMLEYEEPTFR 439 (751)
T ss_dssp SSEEEEEEEECSSEEEEEEEET----TEEEEEEEECCTTTSCCCTTTCCEECC-CCCS--SCEEEECGGGCCCTTCSCEE
T ss_pred CCcEEEEEEEECCEEEEEEEeC----CEEEEEEEecccccccccCCccceEEC-CCCc--eeEEEeccCcccCCCCCEEE
Confidence 1112223344577777765433 2467889996 3444 44442 2222 111111 122 333
Q ss_pred EEccccCCCCcccceEEEEECCCCceEecC
Q 013929 277 VIGGIGGSDSKVLTCGEEYDLETETWTEIP 306 (433)
Q Consensus 277 v~GG~~~~~~~~~~~v~~yd~~t~~W~~~~ 306 (433)
+... + ......++.||+.+++.+.+.
T Consensus 440 ~~~s-s---~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 440 MEYS-S---LATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp EEEE-E---TTEEEEEEEECTTTCCEEEEE
T ss_pred EEEe-C---CCCCCEEEEEECCCCcEEEEe
Confidence 3211 1 123456888999888776664
No 341
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=23.46 E-value=6.1e+02 Score=25.99 Aligned_cols=203 Identities=14% Similarity=0.102 Sum_probs=95.1
Q ss_pred EEEEEcCCCceecCCCCCC-----CcceeeEEEe---CCEEEEEccCCCCCCcCCceEEEeCCCCCeEEcCC-CC-----
Q 013929 195 IYRYSILTNSWSSGMRMNA-----PRCLFGSASL---GEIAILAGGSDLEGNILSSAEMYNSETQTWKVLPS-MK----- 260 (433)
Q Consensus 195 ~~~yd~~t~~W~~~~~~p~-----~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~p----- 260 (433)
+++-+-.-.+|+.+...+. .+..+.+++. .+.||+..|...... ...+++=+=.-.+|+.+.. ++
T Consensus 39 v~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~-~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 39 AYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDE-WAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp EEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSS-CCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred EEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCc-ccEEEEECCCCCcceeccCCcccCccC
Confidence 6776767778998765321 1223444443 246888765321011 1233333333457988742 11
Q ss_pred CCC-cceeEEEE---CCEEEEEccccCCCCcccceEEEEECCCCceEecCCCCCC---CCCCCCCCcCCCCcCCCCEEEE
Q 013929 261 NPR-KMCSGVFM---DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTEIPNMSPA---RGGAARGTEMPASAEAPPLVAV 333 (433)
Q Consensus 261 ~~r-~~~~~~~~---~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~---r~~~~~~~~~~~~~~~~~~~~~ 333 (433)
..| ....+++. .+.+|+. ... ..+++=+=.-.+|+.+..++.. -.+ ...+.
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~g-~~~-------~gl~~S~DgG~TW~~~~~~~~~~~~~~~--------------~~~i~ 175 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWMG-TRT-------EGIWKSSDRAKTWTNVTSIPDAFTNGIG--------------YTSVI 175 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEEE-CSS-------SCEEEESSTTSSCEEETTSCCCCSTTTC--------------EEEEE
T ss_pred CCccceeEEEEcCCCCCEEEEE-ecc-------CCEEEECCCCcccCCCccCccccCCCCC--------------eEEEE
Confidence 112 12234443 3456663 211 1233322223689998764421 111 12233
Q ss_pred E----CCEEEEEecCCCeEEEEeCCCCcEEEeccCCCcc-------c------CCCcccEEEEEeCCEEEEEcCCC-CCC
Q 013929 334 V----NNELYAADYADMEVRKYDKERRLWFTIGRLPERA-------N------SMNGWGLAFRACGDRLIVIGGPK-ASG 395 (433)
Q Consensus 334 ~----~~~ly~~gg~~~~i~~yd~~~~~W~~v~~lp~~~-------~------~~~~~~~~~~~~~~~l~v~GG~~-~~~ 395 (433)
+ .+.||+.......+++=.-...+|+.+..+|... . ....+..++....+.||+..+.. ...
T Consensus 176 ~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~ 255 (789)
T 1sqj_A 176 FDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPW 255 (789)
T ss_dssp ECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSS
T ss_pred ECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCC
Confidence 3 2467776533244555444456899987555321 0 00001122222278898873211 100
Q ss_pred CCeeEEEEeecCCCCCCceEecccCC
Q 013929 396 EGFIELNSWVPSEGPPQWNLLARKQS 421 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~W~~v~~~p~ 421 (433)
....-.+|..+....+|+.+...|.
T Consensus 256 -~g~~g~l~~S~DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 256 -GVTFGEVWRQNRTSGAWDDITPRVG 280 (789)
T ss_dssp -CCCCCCEEEEETTTCCEEECCCCTT
T ss_pred -CCCCceEEEEeCCCCceEECcCCCC
Confidence 0011224445456678999977554
No 342
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=22.53 E-value=3.4e+02 Score=24.61 Aligned_cols=63 Identities=14% Similarity=-0.025 Sum_probs=37.4
Q ss_pred CCEEEEEccccCCCCcccceEEEEECCCCceEe-cCCCCCCCCCCCCCCcCCCCcCCCCEEEEE-CC-EEEEEecCCCeE
Q 013929 272 DGKFYVIGGIGGSDSKVLTCGEEYDLETETWTE-IPNMSPARGGAARGTEMPASAEAPPLVAVV-NN-ELYAADYADMEV 348 (433)
Q Consensus 272 ~g~lyv~GG~~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~-~~-~ly~~gg~~~~i 348 (433)
++++.+.||.+ ..+.++|+.+..=.. +.... ... .+++.. ++ .+++.|+..+.|
T Consensus 155 d~~~las~s~D-------~tv~~Wd~~~~~~~~~~~~~~---~~v-------------~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 155 AEQVIASVGDD-------CTLIIWRLTDEGPILAGYPLS---SPG-------------ISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp EEEEEEEEETT-------SEEEEEEEETTEEEEEEEECS---SCE-------------EEEEEETTEEEEEEEEETTSEE
T ss_pred CCCEEEEEECC-------CeEEEEECCCCceeeeecCCC---CCc-------------EEEEECCCCCceEEecCCCCEE
Confidence 67888888876 346778876553111 11111 110 123333 34 467778888999
Q ss_pred EEEeCCCCc
Q 013929 349 RKYDKERRL 357 (433)
Q Consensus 349 ~~yd~~~~~ 357 (433)
..||..+++
T Consensus 212 ~~wd~~t~~ 220 (393)
T 4gq1_A 212 RIFDWTLNL 220 (393)
T ss_dssp EEEETTCCC
T ss_pred EEEECCCCc
Confidence 999998765
Done!