Query 013936
Match_columns 433
No_of_seqs 436 out of 2989
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:52:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013936.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013936hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 4.3E-75 9.3E-80 542.5 34.6 395 14-425 2-398 (409)
2 COG0429 Predicted hydrolase of 100.0 4.7E-59 1E-63 419.3 29.5 318 86-417 18-342 (345)
3 PLN02511 hydrolase 100.0 8.9E-55 1.9E-59 424.2 39.5 346 61-418 18-368 (388)
4 PRK10985 putative hydrolase; P 100.0 5.8E-49 1.3E-53 375.8 36.7 318 85-417 2-322 (324)
5 PLN02298 hydrolase, alpha/beta 100.0 2.3E-27 5.1E-32 227.8 20.7 281 111-418 29-320 (330)
6 PLN02385 hydrolase; alpha/beta 99.9 3.1E-26 6.6E-31 221.6 18.7 279 111-416 58-346 (349)
7 PHA02857 monoglyceride lipase; 99.9 1E-25 2.2E-30 210.9 21.5 263 118-415 4-273 (276)
8 COG2267 PldB Lysophospholipase 99.9 4.5E-24 9.7E-29 200.0 21.2 274 112-416 7-295 (298)
9 PRK00870 haloalkane dehalogena 99.9 7.2E-24 1.6E-28 201.1 20.7 269 108-414 13-300 (302)
10 TIGR02240 PHA_depoly_arom poly 99.9 2.4E-24 5.2E-29 201.7 16.9 245 153-425 24-276 (276)
11 PRK10749 lysophospholipase L2; 99.9 3.3E-24 7.2E-29 205.6 18.0 287 97-414 18-328 (330)
12 PLN02824 hydrolase, alpha/beta 99.9 1.5E-23 3.3E-28 198.1 22.0 241 154-414 29-293 (294)
13 PRK03592 haloalkane dehalogena 99.9 6.5E-24 1.4E-28 200.7 18.9 245 154-417 27-291 (295)
14 PLN02652 hydrolase; alpha/beta 99.9 2.3E-23 5E-28 202.7 22.9 270 115-417 111-389 (395)
15 KOG1455 Lysophospholipase [Lip 99.9 1.2E-23 2.7E-28 187.9 17.1 280 111-414 24-311 (313)
16 PRK13604 luxD acyl transferase 99.9 1.1E-22 2.4E-27 187.2 21.5 251 114-417 9-261 (307)
17 PLN02679 hydrolase, alpha/beta 99.9 4.4E-22 9.6E-27 193.0 24.0 246 153-416 87-358 (360)
18 TIGR03343 biphenyl_bphD 2-hydr 99.9 3.8E-23 8.2E-28 194.1 14.9 241 153-413 29-281 (282)
19 TIGR01607 PST-A Plasmodium sub 99.9 3.5E-23 7.6E-28 198.1 14.9 272 119-413 2-331 (332)
20 PRK10349 carboxylesterase BioH 99.9 4.2E-23 9E-28 191.1 14.0 232 155-413 14-254 (256)
21 TIGR01738 bioH putative pimelo 99.9 2.7E-23 5.8E-28 189.6 12.2 234 154-412 4-245 (245)
22 PLN03087 BODYGUARD 1 domain co 99.9 1.9E-22 4E-27 198.9 18.8 251 152-414 199-478 (481)
23 TIGR03056 bchO_mg_che_rel puta 99.9 2E-22 4.3E-27 188.5 18.1 246 153-413 27-278 (278)
24 COG1647 Esterase/lipase [Gener 99.9 3.1E-23 6.7E-28 176.5 11.1 224 155-413 16-242 (243)
25 TIGR02427 protocat_pcaD 3-oxoa 99.9 9E-23 2E-27 186.7 15.0 237 153-412 12-250 (251)
26 TIGR03611 RutD pyrimidine util 99.9 2.1E-22 4.5E-27 185.5 17.1 238 152-413 11-256 (257)
27 PRK03204 haloalkane dehalogena 99.9 9.2E-22 2E-26 184.9 21.2 264 112-412 12-285 (286)
28 PLN02965 Probable pheophorbida 99.9 5.1E-23 1.1E-27 190.4 12.3 240 156-416 5-254 (255)
29 PRK06489 hypothetical protein; 99.9 3.8E-22 8.3E-27 193.7 18.8 254 154-417 69-359 (360)
30 PRK10673 acyl-CoA esterase; Pr 99.9 1.6E-22 3.5E-27 186.9 15.1 238 151-414 13-254 (255)
31 TIGR01250 pro_imino_pep_2 prol 99.9 1.8E-21 3.8E-26 182.2 22.1 247 153-413 24-288 (288)
32 PLN02578 hydrolase 99.9 5.5E-22 1.2E-26 192.1 18.4 243 154-413 86-353 (354)
33 PRK07581 hypothetical protein; 99.9 8.6E-22 1.9E-26 189.9 19.7 255 153-417 40-338 (339)
34 KOG4178 Soluble epoxide hydrol 99.9 3.8E-22 8.2E-27 181.4 15.8 252 151-416 41-321 (322)
35 PRK11126 2-succinyl-6-hydroxy- 99.9 2.8E-22 6.1E-27 183.8 15.0 231 154-414 2-241 (242)
36 TIGR03695 menH_SHCHC 2-succiny 99.9 1.9E-22 4.2E-27 184.2 12.9 240 154-413 1-251 (251)
37 TIGR01249 pro_imino_pep_1 prol 99.9 4.9E-21 1.1E-25 181.9 21.2 268 115-415 5-305 (306)
38 KOG4409 Predicted hydrolase/ac 99.9 7.5E-21 1.6E-25 173.3 21.0 302 87-415 37-364 (365)
39 PF12697 Abhydrolase_6: Alpha/ 99.9 7.4E-22 1.6E-26 177.6 14.5 219 157-396 1-221 (228)
40 PRK05077 frsA fermentation/res 99.9 9.6E-21 2.1E-25 185.8 23.3 244 112-415 166-412 (414)
41 PLN02872 triacylglycerol lipas 99.9 2E-21 4.3E-26 188.3 16.1 308 94-417 25-391 (395)
42 PLN02894 hydrolase, alpha/beta 99.9 3.6E-20 7.7E-25 181.7 23.0 259 152-422 103-392 (402)
43 KOG1454 Predicted hydrolase/ac 99.9 2.7E-21 5.9E-26 183.0 14.1 283 114-416 25-325 (326)
44 PRK08775 homoserine O-acetyltr 99.9 4.5E-21 9.9E-26 185.0 13.3 234 171-417 84-341 (343)
45 PLN03084 alpha/beta hydrolase 99.9 6.7E-20 1.5E-24 177.4 20.7 242 153-413 126-382 (383)
46 TIGR01392 homoserO_Ac_trn homo 99.8 1.4E-20 2.9E-25 182.3 15.8 112 153-266 30-164 (351)
47 KOG4391 Predicted alpha/beta h 99.8 6.5E-20 1.4E-24 155.0 16.8 231 111-418 51-285 (300)
48 TIGR03100 hydr1_PEP hydrolase, 99.8 1.8E-19 3.9E-24 168.2 19.8 254 122-413 9-273 (274)
49 PRK05855 short chain dehydroge 99.8 1.3E-19 2.8E-24 187.6 19.8 271 116-417 4-294 (582)
50 PRK00175 metX homoserine O-ace 99.8 1.1E-19 2.3E-24 177.5 17.9 254 153-417 47-376 (379)
51 PRK14875 acetoin dehydrogenase 99.8 1.9E-19 4.2E-24 175.7 18.4 239 152-414 129-370 (371)
52 PLN02211 methyl indole-3-aceta 99.8 1.5E-19 3.2E-24 168.6 16.4 106 152-263 16-121 (273)
53 TIGR01836 PHA_synth_III_C poly 99.8 1.5E-19 3.4E-24 174.8 14.5 106 154-267 62-174 (350)
54 PRK10566 esterase; Provisional 99.8 2E-18 4.4E-23 159.0 17.5 208 152-414 25-247 (249)
55 KOG2984 Predicted hydrolase [G 99.8 1.7E-19 3.6E-24 150.9 8.2 228 156-414 44-275 (277)
56 KOG1552 Predicted alpha/beta h 99.8 6E-18 1.3E-22 148.8 16.3 215 118-418 39-255 (258)
57 PLN02980 2-oxoglutarate decarb 99.8 1.3E-17 2.9E-22 187.5 22.1 247 153-418 1370-1642(1655)
58 PF00561 Abhydrolase_1: alpha/ 99.8 1.4E-18 3E-23 157.4 11.2 207 184-396 1-220 (230)
59 KOG2382 Predicted alpha/beta h 99.8 3.6E-18 7.8E-23 155.6 11.3 239 151-415 49-313 (315)
60 COG1506 DAP2 Dipeptidyl aminop 99.8 3.9E-17 8.5E-22 168.6 19.7 247 111-417 362-618 (620)
61 PF12695 Abhydrolase_5: Alpha/ 99.7 1.5E-17 3.3E-22 139.7 12.1 144 156-391 1-145 (145)
62 PRK06765 homoserine O-acetyltr 99.7 9.3E-17 2E-21 155.8 18.1 256 152-414 54-387 (389)
63 TIGR03101 hydr2_PEP hydrolase, 99.7 2.2E-16 4.9E-21 144.8 17.4 112 152-266 23-136 (266)
64 PF06500 DUF1100: Alpha/beta h 99.7 8.5E-17 1.9E-21 152.7 14.9 239 112-415 163-409 (411)
65 TIGR01838 PHA_synth_I poly(R)- 99.7 1.6E-16 3.4E-21 158.5 16.5 232 153-396 187-460 (532)
66 PRK11071 esterase YqiA; Provis 99.7 1.3E-16 2.9E-21 140.1 13.1 184 155-413 2-189 (190)
67 TIGR00976 /NonD putative hydro 99.7 3.1E-16 6.7E-21 160.3 17.0 133 119-268 1-136 (550)
68 KOG4667 Predicted esterase [Li 99.7 2.6E-16 5.7E-21 133.3 13.0 224 152-413 31-256 (269)
69 PRK07868 acyl-CoA synthetase; 99.7 6.3E-16 1.4E-20 168.4 19.3 255 152-417 65-363 (994)
70 PF00326 Peptidase_S9: Prolyl 99.7 1.4E-16 3E-21 143.2 8.9 197 173-417 4-211 (213)
71 COG2945 Predicted hydrolase of 99.7 2.2E-15 4.8E-20 126.0 13.7 177 151-413 25-205 (210)
72 PLN00021 chlorophyllase 99.6 9.6E-15 2.1E-19 137.6 18.0 187 125-397 37-246 (313)
73 KOG2564 Predicted acetyltransf 99.6 1.5E-14 3.2E-19 127.6 15.6 249 151-416 71-328 (343)
74 PLN02442 S-formylglutathione h 99.6 3.7E-14 8E-19 132.8 19.2 207 123-391 28-262 (283)
75 COG4757 Predicted alpha/beta h 99.6 3.3E-15 7.2E-20 128.2 8.5 261 117-412 8-280 (281)
76 PRK11460 putative hydrolase; P 99.6 4.6E-14 9.9E-19 128.2 16.5 179 151-417 13-210 (232)
77 PRK10115 protease 2; Provision 99.6 4.1E-14 9E-19 147.2 17.5 227 112-391 414-653 (686)
78 KOG2624 Triglyceride lipase-ch 99.6 7.3E-14 1.6E-18 133.8 17.3 289 111-416 45-399 (403)
79 TIGR01840 esterase_phb esteras 99.6 1.5E-13 3.2E-18 123.3 16.7 111 151-264 10-130 (212)
80 TIGR02821 fghA_ester_D S-formy 99.6 2.6E-13 5.7E-18 126.7 19.0 130 123-266 23-175 (275)
81 PF05448 AXE1: Acetyl xylan es 99.5 5.4E-14 1.2E-18 132.7 12.4 244 111-414 53-319 (320)
82 PF02129 Peptidase_S15: X-Pro 99.5 9.1E-15 2E-19 136.3 7.2 130 123-268 1-140 (272)
83 TIGR01839 PHA_synth_II poly(R) 99.5 1.1E-13 2.4E-18 136.7 13.5 109 153-268 214-332 (560)
84 COG3458 Acetyl esterase (deace 99.5 1.9E-13 4.2E-18 120.2 12.3 242 112-416 54-318 (321)
85 COG0596 MhpC Predicted hydrola 99.5 4.8E-13 1E-17 122.3 14.9 102 154-265 21-124 (282)
86 TIGR01849 PHB_depoly_PhaZ poly 99.5 1.2E-12 2.6E-17 125.9 17.6 248 155-414 103-405 (406)
87 COG0412 Dienelactone hydrolase 99.5 6.3E-12 1.4E-16 113.9 19.1 208 116-417 4-235 (236)
88 PF01738 DLH: Dienelactone hyd 99.5 2.3E-13 4.9E-18 122.7 9.7 165 152-395 12-192 (218)
89 PRK10162 acetyl esterase; Prov 99.5 5.6E-12 1.2E-16 120.1 19.2 128 115-266 58-197 (318)
90 COG2021 MET2 Homoserine acetyl 99.4 2.8E-12 6.1E-17 118.9 15.2 114 152-267 49-185 (368)
91 PF02230 Abhydrolase_2: Phosph 99.4 5.1E-12 1.1E-16 113.7 15.5 183 150-415 10-215 (216)
92 TIGR03230 lipo_lipase lipoprot 99.4 2.8E-12 6E-17 124.7 13.0 111 151-263 38-153 (442)
93 cd00707 Pancreat_lipase_like P 99.4 1.2E-12 2.7E-17 121.6 10.2 113 151-265 33-148 (275)
94 PF08538 DUF1749: Protein of u 99.4 5.9E-12 1.3E-16 115.2 12.6 244 153-413 32-303 (303)
95 PF06342 DUF1057: Alpha/beta h 99.3 1.2E-10 2.7E-15 104.2 18.8 126 118-263 10-136 (297)
96 COG2936 Predicted acyl esteras 99.3 2.1E-11 4.5E-16 120.2 14.0 262 112-393 17-293 (563)
97 PRK05371 x-prolyl-dipeptidyl a 99.3 2.4E-11 5.3E-16 127.4 14.5 226 174-417 270-521 (767)
98 PF06821 Ser_hydrolase: Serine 99.3 1.6E-11 3.5E-16 105.3 10.8 155 157-396 1-158 (171)
99 COG3571 Predicted hydrolase of 99.3 1E-10 2.2E-15 94.9 13.8 167 153-391 13-181 (213)
100 PF02273 Acyl_transf_2: Acyl t 99.2 1.8E-10 3.9E-15 100.2 12.5 232 116-391 4-237 (294)
101 COG3208 GrsT Predicted thioest 99.2 1.3E-10 2.8E-15 102.1 10.2 211 152-395 5-220 (244)
102 PF09752 DUF2048: Uncharacteri 99.1 2.7E-09 5.8E-14 99.3 17.6 240 152-412 90-346 (348)
103 COG0657 Aes Esterase/lipase [L 99.1 1.4E-09 3E-14 103.6 16.1 130 120-268 57-195 (312)
104 COG3243 PhaC Poly(3-hydroxyalk 99.1 2.5E-10 5.4E-15 107.4 10.5 109 154-269 107-222 (445)
105 PF07859 Abhydrolase_3: alpha/ 99.1 1.1E-10 2.4E-15 104.5 7.5 102 157-266 1-112 (211)
106 KOG2931 Differentiation-relate 99.1 3E-08 6.6E-13 88.9 22.4 271 114-415 22-306 (326)
107 PF12740 Chlorophyllase2: Chlo 99.1 2.9E-09 6.3E-14 95.9 16.2 104 151-263 14-130 (259)
108 PF12146 Hydrolase_4: Putative 99.1 2.6E-10 5.5E-15 84.3 7.3 45 153-199 15-59 (79)
109 TIGR03502 lipase_Pla1_cef extr 99.1 3.3E-10 7.2E-15 116.9 10.1 94 153-248 448-576 (792)
110 COG0400 Predicted esterase [Ge 99.1 2.6E-09 5.7E-14 93.9 14.1 177 149-415 13-205 (207)
111 KOG1515 Arylacetamide deacetyl 99.1 8.5E-09 1.8E-13 97.2 18.3 254 118-415 65-335 (336)
112 PF12715 Abhydrolase_7: Abhydr 99.1 1.9E-10 4.2E-15 107.9 7.0 134 114-264 88-260 (390)
113 KOG2281 Dipeptidyl aminopeptid 99.1 3.1E-09 6.6E-14 104.0 14.9 239 108-414 604-866 (867)
114 COG4188 Predicted dienelactone 99.0 7.3E-10 1.6E-14 103.3 9.2 117 124-250 49-182 (365)
115 PF07224 Chlorophyllase: Chlor 99.0 3.3E-09 7.3E-14 93.5 12.7 104 151-263 43-156 (307)
116 KOG3043 Predicted hydrolase re 99.0 6.2E-10 1.3E-14 95.9 7.8 159 155-394 40-211 (242)
117 PF00975 Thioesterase: Thioest 99.0 4.9E-09 1.1E-13 95.1 13.6 103 156-265 2-105 (229)
118 PF10230 DUF2305: Uncharacteri 99.0 1.5E-08 3.2E-13 93.8 14.8 109 154-264 2-122 (266)
119 PF07819 PGAP1: PGAP1-like pro 99.0 1.2E-08 2.6E-13 91.8 13.8 109 154-267 4-126 (225)
120 PF03583 LIP: Secretory lipase 99.0 6.8E-08 1.5E-12 90.5 19.0 233 171-418 14-284 (290)
121 PF05728 UPF0227: Uncharacteri 99.0 2.2E-08 4.8E-13 86.9 14.3 90 157-266 2-93 (187)
122 KOG2100 Dipeptidyl aminopeptid 98.9 2.3E-08 5E-13 104.9 16.2 232 123-419 506-751 (755)
123 PF06028 DUF915: Alpha/beta hy 98.9 4.9E-09 1.1E-13 95.4 9.2 112 153-267 11-146 (255)
124 PF03096 Ndr: Ndr family; Int 98.9 5.7E-09 1.2E-13 94.8 9.4 248 152-415 21-279 (283)
125 COG4099 Predicted peptidase [G 98.8 1.6E-07 3.4E-12 84.3 15.9 126 122-266 169-306 (387)
126 KOG4627 Kynurenine formamidase 98.8 1.2E-08 2.6E-13 86.6 8.0 204 117-397 46-253 (270)
127 COG3545 Predicted esterase of 98.8 8E-08 1.7E-12 80.1 12.8 159 155-396 3-161 (181)
128 PF10503 Esterase_phd: Esteras 98.8 6.7E-08 1.4E-12 86.0 12.2 109 152-263 14-131 (220)
129 PF03403 PAF-AH_p_II: Platelet 98.8 1.1E-08 2.4E-13 99.1 7.1 106 152-262 98-260 (379)
130 PF05677 DUF818: Chlamydia CHL 98.8 4.5E-07 9.7E-12 83.7 16.2 119 113-249 111-237 (365)
131 PLN02733 phosphatidylcholine-s 98.7 3.8E-08 8.3E-13 96.6 8.4 98 168-268 106-205 (440)
132 PF01674 Lipase_2: Lipase (cla 98.7 8.2E-09 1.8E-13 91.6 3.1 89 157-247 4-95 (219)
133 KOG2565 Predicted hydrolases o 98.7 5.4E-07 1.2E-11 83.3 14.8 116 123-256 132-256 (469)
134 PF06057 VirJ: Bacterial virul 98.7 8.1E-08 1.8E-12 81.9 8.5 101 156-263 4-106 (192)
135 PF03959 FSH1: Serine hydrolas 98.6 1.2E-07 2.6E-12 84.8 7.9 108 153-264 3-145 (212)
136 PF00151 Lipase: Lipase; Inte 98.6 3.5E-08 7.6E-13 93.7 4.6 109 151-265 68-188 (331)
137 COG3509 LpqC Poly(3-hydroxybut 98.6 7.8E-07 1.7E-11 80.4 11.8 126 122-264 42-179 (312)
138 PF08840 BAAT_C: BAAT / Acyl-C 98.5 3.1E-08 6.8E-13 88.5 2.3 53 211-266 4-58 (213)
139 PF11339 DUF3141: Protein of u 98.5 5E-06 1.1E-10 80.7 17.1 103 151-268 66-179 (581)
140 KOG3847 Phospholipase A2 (plat 98.5 1.4E-06 3.1E-11 78.8 12.2 107 151-262 115-273 (399)
141 PF05705 DUF829: Eukaryotic pr 98.5 7.4E-06 1.6E-10 74.8 16.8 217 157-411 2-239 (240)
142 KOG1553 Predicted alpha/beta h 98.5 1.5E-06 3.3E-11 79.5 11.8 134 112-266 212-347 (517)
143 KOG2237 Predicted serine prote 98.5 4.9E-07 1.1E-11 89.2 9.2 141 113-266 440-586 (712)
144 PF05990 DUF900: Alpha/beta hy 98.5 1.7E-06 3.8E-11 78.3 11.7 115 151-266 15-139 (233)
145 COG1770 PtrB Protease II [Amin 98.5 1.9E-06 4.1E-11 85.8 12.5 227 115-394 420-659 (682)
146 COG4814 Uncharacterized protei 98.4 2.8E-06 6E-11 74.9 9.7 110 153-265 45-177 (288)
147 KOG2551 Phospholipase/carboxyh 98.4 2.4E-05 5.3E-10 67.9 15.4 184 153-418 4-223 (230)
148 PF00756 Esterase: Putative es 98.4 1.2E-06 2.6E-11 80.6 8.1 130 124-266 5-152 (251)
149 KOG3253 Predicted alpha/beta h 98.3 9.3E-07 2E-11 86.5 6.8 189 152-416 174-375 (784)
150 PRK10252 entF enterobactin syn 98.3 3.2E-05 6.9E-10 88.0 20.4 98 154-262 1068-1169(1296)
151 COG3319 Thioesterase domains o 98.2 1E-05 2.2E-10 73.6 10.5 103 155-265 1-104 (257)
152 PF05057 DUF676: Putative seri 98.2 3.5E-06 7.5E-11 75.6 7.2 111 153-266 3-127 (217)
153 PTZ00472 serine carboxypeptida 98.2 2.7E-05 5.9E-10 77.7 14.1 137 113-264 46-216 (462)
154 PLN02606 palmitoyl-protein thi 98.2 0.0001 2.2E-09 67.9 15.8 105 153-265 26-133 (306)
155 KOG4840 Predicted hydrolases o 98.2 5.9E-05 1.3E-09 65.2 13.2 107 154-267 36-147 (299)
156 PRK04940 hypothetical protein; 98.2 6.9E-05 1.5E-09 64.0 13.6 35 227-266 60-94 (180)
157 cd00312 Esterase_lipase Estera 98.2 6.1E-06 1.3E-10 83.9 8.5 126 125-265 77-214 (493)
158 PF05577 Peptidase_S28: Serine 98.0 6.1E-05 1.3E-09 75.2 13.1 129 123-266 10-150 (434)
159 KOG3975 Uncharacterized conser 98.0 0.00012 2.5E-09 64.6 12.7 111 151-263 26-146 (301)
160 KOG1551 Uncharacterized conser 98.0 6.4E-05 1.4E-09 66.7 10.9 246 123-417 98-368 (371)
161 PF12048 DUF3530: Protein of u 98.0 0.0002 4.4E-09 67.6 15.0 114 151-266 84-231 (310)
162 PRK10439 enterobactin/ferric e 98.0 7.4E-05 1.6E-09 73.5 12.3 123 124-263 191-322 (411)
163 KOG3101 Esterase D [General fu 98.0 4.8E-05 1E-09 65.3 8.8 130 125-267 26-182 (283)
164 COG4782 Uncharacterized protei 97.9 8.8E-05 1.9E-09 69.3 10.1 114 152-266 114-236 (377)
165 KOG2112 Lysophospholipase [Lip 97.9 0.00011 2.4E-09 63.3 9.9 179 154-414 3-203 (206)
166 COG1075 LipA Predicted acetylt 97.8 7.5E-05 1.6E-09 71.6 8.4 106 156-269 61-169 (336)
167 PF02450 LCAT: Lecithin:choles 97.8 3.9E-05 8.5E-10 75.1 6.2 88 171-267 66-163 (389)
168 COG2272 PnbA Carboxylesterase 97.7 6.7E-05 1.5E-09 72.9 6.9 127 125-265 78-218 (491)
169 COG1505 Serine proteases of th 97.6 0.00019 4E-09 71.1 8.5 141 111-266 391-537 (648)
170 PF00135 COesterase: Carboxyle 97.6 0.00014 3.1E-09 74.5 7.3 125 125-263 107-244 (535)
171 COG1073 Hydrolases of the alph 97.6 0.00027 5.9E-09 66.1 8.5 72 343-415 224-297 (299)
172 KOG3724 Negative regulator of 97.6 0.00023 4.9E-09 72.4 7.7 101 155-265 90-221 (973)
173 KOG3967 Uncharacterized conser 97.5 0.00099 2.2E-08 57.4 10.4 115 152-266 99-229 (297)
174 smart00824 PKS_TE Thioesterase 97.5 0.001 2.2E-08 58.8 11.0 85 172-262 15-100 (212)
175 PLN02633 palmitoyl protein thi 97.5 0.0017 3.7E-08 60.0 11.7 106 152-265 24-132 (314)
176 PF04301 DUF452: Protein of un 97.4 0.0024 5.3E-08 56.3 12.0 76 154-262 11-88 (213)
177 PF10340 DUF2424: Protein of u 97.4 0.0018 3.9E-08 61.9 11.6 110 153-267 121-238 (374)
178 PF11144 DUF2920: Protein of u 97.3 0.0029 6.4E-08 60.6 11.2 108 151-261 32-216 (403)
179 cd00741 Lipase Lipase. Lipase 97.3 0.00084 1.8E-08 56.6 6.9 56 211-266 12-69 (153)
180 COG4553 DepA Poly-beta-hydroxy 97.2 0.0076 1.7E-07 54.6 12.2 258 153-419 102-411 (415)
181 PF04083 Abhydro_lipase: Parti 97.1 0.0013 2.8E-08 46.0 5.5 50 111-169 9-58 (63)
182 PLN02517 phosphatidylcholine-s 97.1 0.00058 1.2E-08 68.2 4.7 93 172-266 158-265 (642)
183 KOG2541 Palmitoyl protein thio 97.1 0.0056 1.2E-07 55.0 10.0 104 154-265 24-129 (296)
184 PF08386 Abhydrolase_4: TAP-li 97.0 0.00069 1.5E-08 52.9 3.7 61 349-414 33-93 (103)
185 PF01764 Lipase_3: Lipase (cla 97.0 0.0018 4E-08 53.5 6.3 55 211-265 48-106 (140)
186 KOG2183 Prolylcarboxypeptidase 96.9 0.0071 1.5E-07 57.5 10.1 107 154-264 81-202 (492)
187 COG0627 Predicted esterase [Ge 96.9 0.0034 7.3E-08 59.2 7.4 115 151-267 51-190 (316)
188 PF02089 Palm_thioest: Palmito 96.8 0.0023 5E-08 58.6 5.8 109 152-265 4-117 (279)
189 cd00519 Lipase_3 Lipase (class 96.8 0.0026 5.6E-08 57.6 6.1 55 211-265 112-168 (229)
190 PF00450 Peptidase_S10: Serine 96.8 0.012 2.6E-07 58.3 11.3 137 116-267 13-184 (415)
191 KOG2369 Lecithin:cholesterol a 96.6 0.00082 1.8E-08 65.1 1.6 91 170-266 124-227 (473)
192 COG2382 Fes Enterochelin ester 96.6 0.02 4.3E-07 52.7 9.9 108 150-263 94-211 (299)
193 PF10142 PhoPQ_related: PhoPQ- 96.6 0.044 9.4E-07 52.7 12.7 152 225-417 170-322 (367)
194 PF06259 Abhydrolase_8: Alpha/ 96.5 0.047 1E-06 46.9 11.6 111 152-264 17-144 (177)
195 PF01083 Cutinase: Cutinase; 96.5 0.0042 9.1E-08 53.8 5.3 55 211-265 65-123 (179)
196 PF07082 DUF1350: Protein of u 96.4 0.021 4.5E-07 51.2 9.0 98 153-261 16-122 (250)
197 COG2819 Predicted hydrolase of 96.4 0.15 3.3E-06 46.3 14.5 42 219-262 127-170 (264)
198 PF11187 DUF2974: Protein of u 96.4 0.0075 1.6E-07 54.1 6.1 53 211-264 69-123 (224)
199 COG3150 Predicted esterase [Ge 96.3 0.038 8.2E-07 46.1 9.0 39 211-249 43-81 (191)
200 KOG2182 Hydrolytic enzymes of 96.2 0.034 7.4E-07 54.4 9.8 112 151-265 83-208 (514)
201 PLN03016 sinapoylglucose-malat 96.2 0.072 1.6E-06 52.9 12.2 112 151-262 63-208 (433)
202 PF11288 DUF3089: Protein of u 96.2 0.0097 2.1E-07 52.2 5.4 82 184-265 46-137 (207)
203 PLN02454 triacylglycerol lipas 96.1 0.012 2.5E-07 57.1 6.2 38 210-247 209-248 (414)
204 PLN02162 triacylglycerol lipas 96.0 0.017 3.7E-07 56.5 6.8 55 211-265 262-322 (475)
205 PLN00413 triacylglycerol lipas 96.0 0.018 3.9E-07 56.5 6.9 54 212-265 269-328 (479)
206 PLN02209 serine carboxypeptida 95.9 0.12 2.7E-06 51.3 12.5 113 151-265 65-213 (437)
207 PLN02934 triacylglycerol lipas 95.7 0.026 5.7E-07 55.8 6.8 54 211-264 305-364 (515)
208 PLN02408 phospholipase A1 95.3 0.037 8.1E-07 52.9 5.9 54 211-264 182-240 (365)
209 PLN02571 triacylglycerol lipas 95.1 0.069 1.5E-06 51.9 7.1 37 211-247 208-246 (413)
210 COG3946 VirJ Type IV secretory 95.0 0.064 1.4E-06 51.2 6.6 81 156-243 262-342 (456)
211 PLN02847 triacylglycerol lipas 94.5 0.08 1.7E-06 53.3 6.2 36 212-247 236-271 (633)
212 KOG1516 Carboxylesterase and r 94.4 0.072 1.6E-06 54.9 5.9 109 154-263 112-231 (545)
213 KOG4372 Predicted alpha/beta h 94.3 0.093 2E-06 50.3 5.8 88 151-244 77-167 (405)
214 COG5153 CVT17 Putative lipase 94.2 0.11 2.4E-06 47.1 5.8 53 209-266 258-310 (425)
215 KOG4540 Putative lipase essent 94.2 0.11 2.4E-06 47.1 5.8 53 209-266 258-310 (425)
216 PF05576 Peptidase_S37: PS-10 94.0 0.12 2.6E-06 49.7 5.9 108 151-266 60-171 (448)
217 PLN02310 triacylglycerol lipas 94.0 0.12 2.5E-06 50.2 5.9 55 211-265 189-249 (405)
218 KOG2521 Uncharacterized conser 94.0 0.86 1.9E-05 43.5 11.6 243 152-418 37-293 (350)
219 PLN02324 triacylglycerol lipas 93.7 0.1 2.2E-06 50.6 5.0 37 211-247 197-235 (415)
220 KOG4569 Predicted lipase [Lipi 93.6 0.11 2.4E-06 49.8 5.1 60 204-263 148-211 (336)
221 PLN03037 lipase class 3 family 93.1 0.14 3E-06 51.0 4.9 37 211-247 298-338 (525)
222 PLN02802 triacylglycerol lipas 93.0 0.15 3.2E-06 50.7 5.0 37 211-247 312-350 (509)
223 COG2939 Carboxypeptidase C (ca 93.0 0.68 1.5E-05 45.9 9.4 96 151-248 98-219 (498)
224 PLN02719 triacylglycerol lipas 92.9 0.15 3.3E-06 50.6 4.9 37 211-247 277-318 (518)
225 PLN02753 triacylglycerol lipas 92.6 0.18 3.8E-06 50.3 4.8 36 211-246 291-331 (531)
226 PLN02761 lipase class 3 family 92.4 0.19 4.1E-06 50.1 4.8 37 210-246 271-313 (527)
227 KOG1282 Serine carboxypeptidas 92.2 1.8 3.8E-05 43.1 11.3 131 116-262 46-211 (454)
228 PF08237 PE-PPE: PE-PPE domain 91.7 0.68 1.5E-05 41.6 7.2 84 183-266 2-91 (225)
229 KOG4388 Hormone-sensitive lipa 91.4 0.71 1.5E-05 46.3 7.4 101 152-263 394-507 (880)
230 COG4947 Uncharacterized protei 90.7 0.65 1.4E-05 39.1 5.5 48 216-266 90-138 (227)
231 PF05277 DUF726: Protein of un 90.2 0.72 1.6E-05 44.0 6.2 44 224-267 217-263 (345)
232 KOG1202 Animal-type fatty acid 89.0 10 0.00022 41.9 13.7 97 151-263 2120-2218(2376)
233 PLN02213 sinapoylglucose-malat 88.5 1.8 3.9E-05 41.3 7.6 78 185-262 3-94 (319)
234 COG0529 CysC Adenylylsulfate k 87.4 4.7 0.0001 34.5 8.4 42 151-192 19-60 (197)
235 PF06309 Torsin: Torsin; Inte 86.7 1.3 2.7E-05 35.7 4.5 34 151-184 49-82 (127)
236 COG3673 Uncharacterized conser 86.4 5.4 0.00012 37.2 8.9 98 151-248 28-143 (423)
237 PF06850 PHB_depo_C: PHB de-po 84.4 0.93 2E-05 39.2 2.9 66 347-414 130-201 (202)
238 PF09994 DUF2235: Uncharacteri 84.4 7.1 0.00015 36.4 9.1 94 155-248 2-113 (277)
239 COG4822 CbiK Cobalamin biosynt 84.1 7.8 0.00017 34.0 8.3 57 150-223 134-191 (265)
240 PF01583 APS_kinase: Adenylyls 79.6 4.6 9.9E-05 33.9 5.3 40 154-193 1-40 (156)
241 PF06441 EHN: Epoxide hydrolas 77.5 3.2 6.9E-05 32.7 3.6 35 118-167 71-105 (112)
242 PF09949 DUF2183: Uncharacteri 77.2 31 0.00066 26.6 8.8 85 170-259 11-97 (100)
243 PF07519 Tannase: Tannase and 76.3 30 0.00066 34.9 11.1 88 178-268 54-154 (474)
244 PF03283 PAE: Pectinacetyleste 73.8 3.7 7.9E-05 39.8 3.7 35 211-245 138-174 (361)
245 PF03205 MobB: Molybdopterin g 70.3 11 0.00024 31.0 5.4 44 157-200 2-45 (140)
246 COG2830 Uncharacterized protei 68.3 16 0.00034 30.7 5.6 75 156-262 13-88 (214)
247 COG4287 PqaA PhoPQ-activated p 68.1 30 0.00065 33.2 8.0 64 347-417 326-389 (507)
248 KOG2029 Uncharacterized conser 67.7 3.7 8.1E-05 41.5 2.3 53 214-266 511-574 (697)
249 KOG2385 Uncharacterized conser 66.2 14 0.0003 37.0 5.7 44 224-267 444-490 (633)
250 TIGR03709 PPK2_rel_1 polyphosp 65.8 8.1 0.00017 35.5 3.9 40 152-191 53-92 (264)
251 COG1087 GalE UDP-glucose 4-epi 63.9 15 0.00032 34.4 5.1 75 158-236 3-84 (329)
252 TIGR03712 acc_sec_asp2 accesso 63.5 29 0.00063 34.7 7.4 100 149-264 284-389 (511)
253 PF07519 Tannase: Tannase and 63.1 14 0.0003 37.4 5.4 63 350-414 353-426 (474)
254 TIGR03707 PPK2_P_aer polyphosp 61.5 10 0.00022 34.2 3.6 41 152-192 28-68 (230)
255 COG5192 BMS1 GTP-binding prote 59.9 1.5E+02 0.0033 30.4 11.5 103 151-260 65-172 (1077)
256 cd03146 GAT1_Peptidase_E Type 59.4 83 0.0018 27.8 9.2 85 153-243 30-129 (212)
257 cd05312 NAD_bind_1_malic_enz N 57.5 10 0.00023 35.1 3.1 102 157-265 27-144 (279)
258 PRK00889 adenylylsulfate kinas 55.8 29 0.00063 29.5 5.5 37 155-191 4-40 (175)
259 PRK10751 molybdopterin-guanine 55.6 33 0.00071 29.4 5.7 43 154-196 5-47 (173)
260 PF03976 PPK2: Polyphosphate k 55.4 6.8 0.00015 35.3 1.5 40 153-192 29-68 (228)
261 KOG2170 ATPase of the AAA+ sup 55.0 21 0.00044 33.4 4.5 33 150-183 105-138 (344)
262 KOG1532 GTPase XAB1, interacts 54.9 19 0.00042 33.1 4.3 42 150-191 14-55 (366)
263 PRK05282 (alpha)-aspartyl dipe 54.0 73 0.0016 28.8 7.9 93 153-246 30-131 (233)
264 PRK07933 thymidylate kinase; V 51.8 39 0.00084 30.0 5.8 42 157-198 2-43 (213)
265 PRK03846 adenylylsulfate kinas 51.4 95 0.0021 27.0 8.2 40 152-191 21-60 (198)
266 TIGR00176 mobB molybdopterin-g 50.9 33 0.0007 28.8 4.9 38 158-195 2-39 (155)
267 cd01841 NnaC_like NnaC (CMP-Ne 50.9 87 0.0019 26.2 7.8 75 155-233 23-97 (174)
268 PF01580 FtsK_SpoIIIE: FtsK/Sp 50.4 84 0.0018 27.4 7.8 65 158-222 41-113 (205)
269 COG1763 MobB Molybdopterin-gua 49.9 35 0.00077 28.8 4.9 40 156-195 3-42 (161)
270 PRK00652 lpxK tetraacyldisacch 49.1 98 0.0021 29.6 8.3 33 165-198 61-93 (325)
271 KOG1283 Serine carboxypeptidas 48.4 1.5E+02 0.0032 28.2 8.9 93 152-247 29-142 (414)
272 cd04951 GT1_WbdM_like This fam 47.8 1.2E+02 0.0027 28.4 9.2 38 156-193 2-39 (360)
273 PF12242 Eno-Rase_NADH_b: NAD( 47.6 24 0.00051 25.6 2.9 44 207-250 17-63 (78)
274 TIGR02069 cyanophycinase cyano 45.5 97 0.0021 28.3 7.5 92 152-245 26-133 (250)
275 cd01983 Fer4_NifH The Fer4_Nif 45.2 42 0.00091 24.5 4.4 32 159-190 3-34 (99)
276 cd04502 SGNH_hydrolase_like_7 44.9 84 0.0018 26.3 6.7 75 156-234 23-97 (171)
277 PF05576 Peptidase_S37: PS-10 44.6 45 0.00097 32.7 5.2 63 348-413 349-412 (448)
278 PF02606 LpxK: Tetraacyldisacc 44.6 68 0.0015 30.6 6.5 34 165-199 47-80 (326)
279 PF01656 CbiA: CobQ/CobB/MinD/ 43.2 43 0.00093 28.7 4.7 35 158-192 2-36 (195)
280 TIGR01425 SRP54_euk signal rec 42.8 49 0.0011 32.9 5.4 39 153-191 98-136 (429)
281 COG1073 Hydrolases of the alph 42.8 1.7 3.7E-05 40.1 -4.6 95 152-249 47-154 (299)
282 COG4088 Predicted nucleotide k 42.7 29 0.00063 30.7 3.3 35 157-191 3-37 (261)
283 PF09419 PGP_phosphatase: Mito 42.6 85 0.0018 26.7 6.1 53 179-237 36-88 (168)
284 CHL00175 minD septum-site dete 42.6 65 0.0014 29.8 6.1 39 154-192 15-53 (281)
285 COG3340 PepE Peptidase E [Amin 41.8 84 0.0018 27.9 6.0 90 152-242 30-132 (224)
286 PF10081 Abhydrolase_9: Alpha/ 40.9 2.1E+02 0.0046 26.6 8.7 40 227-266 109-149 (289)
287 KOG1610 Corticosteroid 11-beta 40.8 88 0.0019 29.5 6.3 68 157-228 31-106 (322)
288 COG1089 Gmd GDP-D-mannose dehy 40.0 1.1E+02 0.0025 28.5 6.8 72 157-232 4-86 (345)
289 TIGR03708 poly_P_AMP_trns poly 39.6 45 0.00099 33.7 4.7 42 152-193 37-78 (493)
290 cd01523 RHOD_Lact_B Member of 39.1 65 0.0014 24.2 4.6 34 152-193 60-93 (100)
291 TIGR00682 lpxK tetraacyldisacc 38.8 1.1E+02 0.0025 28.9 7.0 44 153-198 27-72 (311)
292 PRK06696 uridine kinase; Valid 38.3 66 0.0014 28.6 5.2 39 152-190 19-57 (223)
293 COG0552 FtsY Signal recognitio 38.1 63 0.0014 30.7 5.0 38 152-189 136-173 (340)
294 cd07212 Pat_PNPLA9 Patatin-lik 37.1 51 0.0011 31.2 4.4 19 229-247 34-52 (312)
295 PLN02924 thymidylate kinase 37.1 97 0.0021 27.6 6.0 42 152-193 13-54 (220)
296 cd02028 UMPK_like Uridine mono 36.9 1.5E+02 0.0032 25.4 7.0 39 157-195 1-39 (179)
297 COG3727 Vsr DNA G:T-mismatch r 36.7 98 0.0021 25.0 5.1 15 175-189 100-114 (150)
298 COG0541 Ffh Signal recognition 36.6 76 0.0016 31.4 5.4 45 145-189 90-134 (451)
299 cd01828 sialate_O-acetylestera 36.3 1.6E+02 0.0034 24.5 7.1 72 157-233 23-94 (169)
300 PRK13230 nitrogenase reductase 36.1 72 0.0016 29.5 5.3 41 156-197 3-43 (279)
301 KOG0780 Signal recognition par 36.1 52 0.0011 32.0 4.1 39 151-189 97-135 (483)
302 PF08484 Methyltransf_14: C-me 36.0 95 0.0021 26.2 5.4 44 211-258 55-98 (160)
303 PTZ00445 p36-lilke protein; Pr 35.3 2.4E+02 0.0052 25.1 7.8 66 171-238 30-103 (219)
304 PRK13768 GTPase; Provisional 35.2 72 0.0016 29.1 5.0 35 157-191 4-38 (253)
305 PF00004 AAA: ATPase family as 35.2 1.1E+02 0.0023 24.0 5.6 35 158-195 1-35 (132)
306 cd07198 Patatin Patatin-like p 34.8 61 0.0013 27.4 4.2 33 216-249 16-48 (172)
307 KOG0369 Pyruvate carboxylase [ 34.5 2.1E+02 0.0046 30.0 8.3 65 170-247 718-784 (1176)
308 PF13721 SecD-TM1: SecD export 34.5 74 0.0016 24.5 4.1 36 23-68 3-38 (101)
309 TIGR00455 apsK adenylylsulfate 34.4 2.9E+02 0.0063 23.4 9.9 39 153-191 16-54 (184)
310 COG0552 FtsY Signal recognitio 34.2 2.9E+02 0.0064 26.4 8.7 94 158-260 197-292 (340)
311 PF04084 ORC2: Origin recognit 34.1 2.4E+02 0.0052 27.0 8.4 99 158-261 57-176 (326)
312 cd02027 APSK Adenosine 5'-phos 34.0 62 0.0013 26.7 4.0 34 157-190 1-34 (149)
313 PRK05541 adenylylsulfate kinas 33.8 84 0.0018 26.6 5.0 38 153-190 5-42 (176)
314 TIGR03371 cellulose_yhjQ cellu 33.6 86 0.0019 28.1 5.3 40 156-195 3-42 (246)
315 cd02036 MinD Bacterial cell di 33.2 87 0.0019 26.3 5.0 35 158-192 3-37 (179)
316 PLN02213 sinapoylglucose-malat 33.2 48 0.001 31.5 3.6 59 350-413 233-315 (319)
317 cd07225 Pat_PNPLA6_PNPLA7 Pata 33.1 61 0.0013 30.7 4.2 32 216-248 33-64 (306)
318 PRK10867 signal recognition pa 32.5 90 0.0019 31.1 5.4 39 153-191 98-137 (433)
319 PRK09435 membrane ATPase/prote 32.5 1.1E+02 0.0023 29.4 5.7 40 152-191 53-92 (332)
320 cd03129 GAT1_Peptidase_E_like 32.3 1.5E+02 0.0032 26.0 6.4 90 153-244 28-130 (210)
321 PRK00771 signal recognition pa 32.3 88 0.0019 31.3 5.3 40 153-192 93-132 (437)
322 PRK10824 glutaredoxin-4; Provi 32.2 2.5E+02 0.0055 22.1 7.9 83 152-250 13-95 (115)
323 PRK06731 flhF flagellar biosyn 32.0 3.4E+02 0.0074 25.1 8.9 76 173-260 143-219 (270)
324 PRK05568 flavodoxin; Provision 31.9 2.7E+02 0.0059 22.4 7.6 78 157-235 5-91 (142)
325 PRK13973 thymidylate kinase; P 31.8 1.2E+02 0.0026 26.7 5.8 38 156-193 4-41 (213)
326 PRK10279 hypothetical protein; 31.8 62 0.0013 30.5 4.0 32 216-248 23-54 (300)
327 PF01972 SDH_sah: Serine dehyd 31.2 3.2E+02 0.007 25.3 8.2 62 180-242 45-106 (285)
328 PF01935 DUF87: Domain of unkn 31.0 81 0.0018 28.0 4.6 36 158-193 26-62 (229)
329 cd07207 Pat_ExoU_VipD_like Exo 30.9 74 0.0016 27.4 4.2 33 215-248 16-48 (194)
330 cd01836 FeeA_FeeB_like SGNH_hy 30.8 1.8E+02 0.004 24.6 6.7 73 156-233 41-113 (191)
331 cd01833 XynB_like SGNH_hydrola 30.6 1.6E+02 0.0035 24.0 6.1 69 161-233 18-86 (157)
332 cd02034 CooC The accessory pro 30.4 1.1E+02 0.0023 24.2 4.6 34 158-191 2-35 (116)
333 PRK07667 uridine kinase; Provi 30.3 1.4E+02 0.0031 25.8 5.9 42 153-194 15-56 (193)
334 TIGR02884 spore_pdaA delta-lac 30.3 64 0.0014 28.8 3.7 35 155-190 187-221 (224)
335 PF14606 Lipase_GDSL_3: GDSL-l 30.1 1E+02 0.0022 26.6 4.6 26 209-234 76-101 (178)
336 cd02037 MRP-like MRP (Multiple 30.1 1E+02 0.0022 25.9 4.8 37 157-193 2-38 (169)
337 cd03028 GRX_PICOT_like Glutare 29.8 2.3E+02 0.005 20.9 8.6 80 153-249 7-87 (90)
338 PF03808 Glyco_tran_WecB: Glyc 29.7 2.2E+02 0.0047 24.2 6.8 28 211-240 88-115 (172)
339 PRK14494 putative molybdopteri 29.7 1.1E+02 0.0025 27.4 5.2 40 157-196 3-42 (229)
340 TIGR00959 ffh signal recogniti 29.7 1.2E+02 0.0026 30.2 5.8 39 153-191 97-136 (428)
341 cd03116 MobB Molybdenum is an 29.7 1.3E+02 0.0028 25.3 5.2 40 157-196 3-42 (159)
342 PRK13700 conjugal transfer pro 29.7 90 0.0019 33.2 5.0 36 158-193 188-223 (732)
343 PRK14489 putative bifunctional 29.6 1.1E+02 0.0023 29.8 5.4 43 154-196 204-246 (366)
344 PF05577 Peptidase_S28: Serine 29.6 65 0.0014 32.1 4.0 42 351-396 377-418 (434)
345 PRK13529 malate dehydrogenase; 29.5 53 0.0012 33.7 3.3 36 157-193 297-339 (563)
346 TIGR03018 pepcterm_TyrKin exop 29.3 1.7E+02 0.0036 25.6 6.2 41 153-193 34-75 (207)
347 PLN02209 serine carboxypeptida 28.9 64 0.0014 32.2 3.8 59 350-413 351-433 (437)
348 PTZ00472 serine carboxypeptida 28.6 50 0.0011 33.3 3.0 60 350-413 364-457 (462)
349 PF10412 TrwB_AAD_bind: Type I 28.6 77 0.0017 31.1 4.2 36 158-193 18-53 (386)
350 cd03115 SRP The signal recogni 28.6 1.2E+02 0.0025 25.6 5.0 36 157-192 2-37 (173)
351 TIGR03574 selen_PSTK L-seryl-t 28.5 79 0.0017 28.7 4.1 34 157-190 1-34 (249)
352 KOG1282 Serine carboxypeptidas 28.3 82 0.0018 31.6 4.3 60 351-414 364-447 (454)
353 PF08433 KTI12: Chromatin asso 28.3 93 0.002 28.8 4.5 39 157-195 3-41 (270)
354 PRK01906 tetraacyldisaccharide 28.2 1.9E+02 0.0042 27.7 6.7 33 165-198 68-100 (338)
355 COG2240 PdxK Pyridoxal/pyridox 28.2 2.2E+02 0.0048 26.4 6.8 64 159-234 10-81 (281)
356 PF11713 Peptidase_C80: Peptid 28.1 33 0.00071 28.9 1.3 31 209-239 78-116 (157)
357 PHA02519 plasmid partition pro 28.1 1.7E+02 0.0037 28.7 6.5 43 155-197 106-150 (387)
358 PLN03016 sinapoylglucose-malat 28.1 67 0.0015 32.1 3.8 59 350-413 347-429 (433)
359 cd01521 RHOD_PspE2 Member of t 28.0 1.5E+02 0.0033 22.7 5.1 34 152-189 63-96 (110)
360 cd07227 Pat_Fungal_NTE1 Fungal 27.9 82 0.0018 29.1 4.1 21 228-248 39-59 (269)
361 TIGR01007 eps_fam capsular exo 27.6 1.8E+02 0.0038 25.3 6.1 39 154-192 17-55 (204)
362 KOG2550 IMP dehydrogenase/GMP 27.6 98 0.0021 30.3 4.5 54 173-246 253-306 (503)
363 PF10686 DUF2493: Protein of u 27.5 1.3E+02 0.0028 21.4 4.1 33 153-189 30-63 (71)
364 PRK14974 cell division protein 27.4 1.3E+02 0.0028 28.8 5.4 38 153-190 138-175 (336)
365 PF10605 3HBOH: 3HB-oligomer h 27.3 67 0.0014 33.1 3.5 47 348-394 552-606 (690)
366 PF13207 AAA_17: AAA domain; P 27.1 97 0.0021 24.0 3.9 31 157-191 1-32 (121)
367 KOG2728 Uncharacterized conser 26.9 2E+02 0.0044 26.1 6.0 66 102-193 18-83 (302)
368 TIGR02759 TraD_Ftype type IV c 26.8 1.1E+02 0.0024 31.8 5.1 36 158-193 179-214 (566)
369 cd03811 GT1_WabH_like This fam 26.5 4.9E+02 0.011 23.6 10.7 40 156-195 2-41 (353)
370 TIGR00041 DTMP_kinase thymidyl 26.4 1.7E+02 0.0037 25.0 5.7 38 156-193 4-41 (195)
371 PRK13869 plasmid-partitioning 26.2 1.4E+02 0.0031 29.4 5.7 42 155-196 122-163 (405)
372 PRK05506 bifunctional sulfate 26.1 1.1E+02 0.0024 32.2 5.2 39 152-190 457-495 (632)
373 cd02032 Bchl_like This family 26.0 1.3E+02 0.0029 27.5 5.2 35 162-196 7-41 (267)
374 cd07209 Pat_hypo_Ecoli_Z1214_l 26.0 95 0.0021 27.5 4.1 33 216-249 16-48 (215)
375 cd02042 ParA ParA and ParB of 26.0 1.6E+02 0.0034 22.2 4.8 28 165-192 10-37 (104)
376 cd07210 Pat_hypo_W_succinogene 25.9 1.1E+02 0.0024 27.2 4.5 32 216-248 18-49 (221)
377 PHA02518 ParA-like protein; Pr 25.8 1.7E+02 0.0037 25.3 5.7 40 157-196 3-42 (211)
378 PRK06171 sorbitol-6-phosphate 25.7 4E+02 0.0086 23.9 8.4 64 157-225 11-76 (266)
379 PRK05368 homoserine O-succinyl 25.6 1.4E+02 0.003 28.2 5.1 38 207-248 118-155 (302)
380 PRK13705 plasmid-partitioning 25.3 1.7E+02 0.0037 28.7 6.0 43 155-197 107-150 (388)
381 cd07218 Pat_iPLA2 Calcium-inde 25.3 1.1E+02 0.0024 27.8 4.4 20 230-249 33-52 (245)
382 PRK09004 FMN-binding protein M 25.3 3.8E+02 0.0083 22.0 7.8 36 157-192 4-39 (146)
383 TIGR02764 spore_ybaN_pdaB poly 25.2 69 0.0015 27.6 3.0 35 156-190 153-188 (191)
384 PF08248 Tryp_FSAP: Tryptophyl 25.2 44 0.00096 14.6 0.8 8 85-92 2-9 (12)
385 PF13200 DUF4015: Putative gly 25.1 2E+02 0.0044 27.3 6.2 66 158-224 2-74 (316)
386 TIGR01969 minD_arch cell divis 25.1 1.6E+02 0.0034 26.4 5.4 37 157-193 3-39 (251)
387 cd02033 BchX Chlorophyllide re 25.1 1.7E+02 0.0038 27.9 5.8 36 157-192 33-68 (329)
388 PF05673 DUF815: Protein of un 25.0 1.3E+02 0.0027 27.5 4.5 34 158-191 55-88 (249)
389 PF14981 FAM165: FAM165 family 24.9 87 0.0019 20.0 2.4 24 20-43 2-25 (51)
390 TIGR01281 DPOR_bchL light-inde 24.8 1.5E+02 0.0032 27.1 5.3 35 162-196 7-41 (268)
391 PRK14495 putative molybdopteri 24.8 1.5E+02 0.0032 29.6 5.3 40 157-196 3-42 (452)
392 PRK06762 hypothetical protein; 24.8 1.3E+02 0.0028 25.1 4.5 25 155-179 2-26 (166)
393 PF13191 AAA_16: AAA ATPase do 24.7 1.1E+02 0.0023 25.8 4.1 43 152-194 21-63 (185)
394 PRK12467 peptide synthase; Pro 24.7 2.6E+02 0.0056 36.9 8.7 86 154-247 3692-3777(3956)
395 PF02492 cobW: CobW/HypB/UreG, 24.7 1.1E+02 0.0024 26.1 4.1 32 157-189 2-33 (178)
396 cd07208 Pat_hypo_Ecoli_yjju_li 24.6 1.1E+02 0.0023 28.1 4.2 35 216-250 16-50 (266)
397 TIGR03453 partition_RepA plasm 24.6 1.6E+02 0.0035 28.8 5.7 42 155-196 105-146 (387)
398 TIGR03708 poly_P_AMP_trns poly 24.5 83 0.0018 31.9 3.6 41 152-192 296-336 (493)
399 TIGR03127 RuMP_HxlB 6-phospho 24.5 3.7E+02 0.0081 22.7 7.4 79 158-241 33-114 (179)
400 PTZ00317 NADP-dependent malic 24.5 81 0.0018 32.3 3.6 83 157-246 299-401 (559)
401 cd03131 GATase1_HTS Type 1 glu 24.3 78 0.0017 27.2 3.0 39 207-249 81-119 (175)
402 TIGR00128 fabD malonyl CoA-acy 24.1 95 0.0021 28.7 3.9 22 226-247 82-103 (290)
403 TIGR00750 lao LAO/AO transport 23.9 1.9E+02 0.0041 27.1 5.8 37 155-191 34-70 (300)
404 PTZ00062 glutaredoxin; Provisi 23.9 5E+02 0.011 22.8 8.5 82 152-250 111-193 (204)
405 PRK14491 putative bifunctional 23.7 1.8E+02 0.0039 30.5 6.0 42 156-197 11-52 (597)
406 PF05707 Zot: Zonular occluden 23.7 1E+02 0.0022 26.7 3.7 38 157-195 2-40 (193)
407 cd07224 Pat_like Patatin-like 23.7 1.2E+02 0.0026 27.3 4.3 34 216-249 17-51 (233)
408 PRK06179 short chain dehydroge 23.6 3.4E+02 0.0073 24.5 7.4 65 157-225 6-72 (270)
409 PF00698 Acyl_transf_1: Acyl t 23.5 77 0.0017 30.0 3.2 26 222-247 79-104 (318)
410 TIGR03131 malonate_mdcH malona 23.3 1.3E+02 0.0027 28.1 4.5 24 224-247 73-96 (295)
411 cd07228 Pat_NTE_like_bacteria 23.2 1.4E+02 0.003 25.3 4.4 33 216-249 18-50 (175)
412 cd03798 GT1_wlbH_like This fam 23.2 5.9E+02 0.013 23.4 9.7 39 157-195 2-43 (377)
413 KOG0781 Signal recognition par 23.1 5.4E+02 0.012 26.1 8.6 89 158-259 442-537 (587)
414 cd07205 Pat_PNPLA6_PNPLA7_NTE1 23.1 1.4E+02 0.003 25.2 4.5 32 216-248 18-49 (175)
415 PRK09739 hypothetical protein; 23.1 4.9E+02 0.011 22.5 8.6 39 157-195 8-46 (199)
416 COG3867 Arabinogalactan endo-1 23.0 4.4E+02 0.0095 24.8 7.5 69 155-236 215-285 (403)
417 TIGR01968 minD_bact septum sit 23.0 1.8E+02 0.004 26.1 5.5 38 156-193 3-40 (261)
418 cd03818 GT1_ExpC_like This fam 22.6 1.7E+02 0.0038 28.4 5.6 38 157-198 2-39 (396)
419 PRK06523 short chain dehydroge 22.5 4.9E+02 0.011 23.2 8.3 64 157-225 11-76 (260)
420 TIGR00365 monothiol glutaredox 22.5 3.4E+02 0.0074 20.4 8.5 81 153-250 11-92 (97)
421 cd03145 GAT1_cyanophycinase Ty 22.4 4.8E+02 0.01 23.0 7.9 91 153-245 28-134 (217)
422 TIGR02015 BchY chlorophyllide 22.3 2.9E+02 0.0063 27.5 7.0 78 154-242 27-104 (422)
423 PF10566 Glyco_hydro_97: Glyco 22.3 4.4E+02 0.0096 24.5 7.6 68 168-238 31-98 (273)
424 cd01822 Lysophospholipase_L1_l 22.3 4.5E+02 0.0097 21.7 7.7 73 155-233 36-108 (177)
425 PF06792 UPF0261: Uncharacteri 22.2 6E+02 0.013 25.1 8.8 94 155-250 2-118 (403)
426 PRK13235 nifH nitrogenase redu 22.2 1.7E+02 0.0036 26.9 5.1 39 157-196 4-42 (274)
427 cd03812 GT1_CapH_like This fam 22.2 5.8E+02 0.013 23.7 9.1 40 156-195 2-41 (358)
428 KOG1209 1-Acyl dihydroxyaceton 22.2 1.7E+02 0.0037 26.1 4.6 36 155-193 7-42 (289)
429 cd01838 Isoamyl_acetate_hydrol 22.1 2.9E+02 0.0063 23.3 6.4 78 156-234 33-115 (199)
430 TIGR00064 ftsY signal recognit 22.1 2.1E+02 0.0046 26.4 5.7 35 156-191 74-108 (272)
431 PF03709 OKR_DC_1_N: Orn/Lys/A 21.9 2.7E+02 0.0058 21.8 5.5 66 171-236 5-77 (115)
432 cd01518 RHOD_YceA Member of th 21.7 1.5E+02 0.0032 22.3 3.9 32 152-189 60-92 (101)
433 KOG4389 Acetylcholinesterase/B 21.7 1.4E+02 0.003 30.2 4.4 106 154-263 135-254 (601)
434 TIGR02016 BchX chlorophyllide 21.7 1.9E+02 0.0041 27.1 5.3 38 157-195 3-40 (296)
435 TIGR03029 EpsG chain length de 21.6 2.4E+02 0.0053 25.8 6.1 39 153-191 102-140 (274)
436 cd01672 TMPK Thymidine monopho 21.6 2.1E+02 0.0045 24.4 5.3 37 157-193 2-38 (200)
437 COG3181 Uncharacterized protei 21.5 2E+02 0.0044 27.3 5.3 47 151-197 25-72 (319)
438 PRK07952 DNA replication prote 21.5 1.7E+02 0.0036 26.7 4.8 34 157-190 101-134 (244)
439 PRK06114 short chain dehydroge 21.4 4.1E+02 0.0089 23.7 7.5 33 157-193 10-42 (254)
440 cd02117 NifH_like This family 21.3 2.3E+02 0.0051 24.8 5.6 36 162-197 7-42 (212)
441 KOG4022 Dihydropteridine reduc 21.2 4.5E+02 0.0097 22.4 6.6 51 173-223 17-67 (236)
442 cd00229 SGNH_hydrolase SGNH_hy 21.1 4E+02 0.0087 21.4 7.0 77 154-233 34-113 (187)
443 cd02040 NifH NifH gene encodes 21.1 2.3E+02 0.0051 25.7 5.8 40 157-197 4-43 (270)
444 PF00450 Peptidase_S10: Serine 21.1 39 0.00084 33.2 0.6 59 350-412 330-413 (415)
445 TIGR02873 spore_ylxY probable 21.0 1.3E+02 0.0029 27.7 4.1 33 156-190 232-264 (268)
446 PF00091 Tubulin: Tubulin/FtsZ 21.0 1.4E+02 0.0031 26.3 4.2 31 152-182 122-152 (216)
447 cd02038 FleN-like FleN is a me 20.9 2.7E+02 0.0059 22.4 5.6 40 157-196 2-41 (139)
448 COG4874 Uncharacterized protei 20.9 1.8E+02 0.004 26.2 4.5 27 173-199 60-86 (318)
449 PRK08220 2,3-dihydroxybenzoate 20.9 4.3E+02 0.0092 23.4 7.5 63 158-225 11-75 (252)
450 COG1663 LpxK Tetraacyldisaccha 20.9 6.1E+02 0.013 24.3 8.3 33 165-198 59-91 (336)
451 COG0607 PspE Rhodanese-related 20.9 1.7E+02 0.0036 22.1 4.1 35 152-193 60-94 (110)
452 PRK09444 pntB pyridine nucleot 20.8 1.7E+02 0.0038 29.1 4.9 100 156-258 308-410 (462)
453 PRK14974 cell division protein 20.8 7.5E+02 0.016 23.7 9.9 75 174-260 213-287 (336)
454 PRK06398 aldose dehydrogenase; 20.8 4.9E+02 0.011 23.3 7.9 62 157-225 8-71 (258)
455 cd01714 ETF_beta The electron 20.7 5.7E+02 0.012 22.3 8.6 73 175-260 68-145 (202)
456 smart00827 PKS_AT Acyl transfe 20.6 1.5E+02 0.0032 27.5 4.5 25 223-247 78-102 (298)
457 PF08250 Sperm_act_pep: Sperm- 20.6 22 0.00047 15.0 -0.6 6 233-238 1-6 (10)
458 TIGR02540 gpx7 putative glutat 20.5 4.8E+02 0.01 21.3 7.8 24 174-197 46-69 (153)
459 COG0331 FabD (acyl-carrier-pro 20.4 1.3E+02 0.0027 28.6 3.8 27 220-246 77-104 (310)
460 COG1752 RssA Predicted esteras 20.3 1.4E+02 0.003 28.1 4.1 25 226-250 38-62 (306)
461 cd07213 Pat17_PNPLA8_PNPLA9_li 20.3 1.6E+02 0.0035 27.4 4.5 20 229-248 36-55 (288)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=4.3e-75 Score=542.53 Aligned_cols=395 Identities=42% Similarity=0.743 Sum_probs=360.1
Q ss_pred HHhHHHHhccCchhHHHHHHHHHHHHHHHHhhhhhcccccccCccCCCeEEEEcCChHHHHHHHhhcccccCCCCCCCCC
Q 013936 14 YNLLFKSLSLIPLSHYFLFIFLIFIIFLYNFLEIHFLRDLVTGFRGDPVYLTYSASSKLYQSLAAKCHVLHGRYLPTPWL 93 (433)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~y~p~~~~ 93 (433)
+.++++.....++..+++..+..+.+++|.+.++++ ..+++.+.+. +++|.++++++||.|+++|.|++|+
T Consensus 2 ~~l~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~l~~~-~~~f~~~l~~~~~~l~~~y~p~~w~ 72 (409)
T KOG1838|consen 2 LLLLFQSLLGPVLSPVLLGLLIGVAVVLYAFLYLKS--------PPRKPSLFCG-DSGFARFLVPKCPLLEEKYLPTLWL 72 (409)
T ss_pred ccccccccccccccHHHHHHhhhhheeeeecceeec--------cCCCCeeecC-chHHHHHHHhhccccccccccceee
Confidence 457778877788888888888888788899999877 3455555554 6899999999999999999999999
Q ss_pred CcccHHHHhhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHH
Q 013936 94 SSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK 173 (433)
Q Consensus 94 ~~~~lqt~~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~ 173 (433)
++||+||++.++++++|.+.|+|++++++|||++++||+.+++.. ....++..|+||++||++|+|++.|++
T Consensus 73 ~~ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~--------~~~~~~~~P~vvilpGltg~S~~~YVr 144 (409)
T KOG1838|consen 73 FSGHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSR--------CRTDDGTDPIVVILPGLTGGSHESYVR 144 (409)
T ss_pred cCCeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCcccc--------cCCCCCCCcEEEEecCCCCCChhHHHH
Confidence 999999999999999999999999999999999999999887631 112346779999999999999999999
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCC
Q 013936 174 HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTP 253 (433)
Q Consensus 174 ~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~ 253 (433)
+++..++++||+|+++|.||+|+++.++++.|++++++|+++++++++++||.+|++++|+||||+++++|+++.+++.+
T Consensus 145 ~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~ 224 (409)
T KOG1838|consen 145 HLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTP 224 (409)
T ss_pred HHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred ceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhh-hhhccCCHHHHhcCCCHHHHHHhhhhccCCCCC
Q 013936 254 LVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQS-TVARLADWEGITKSRSIRDFDNHATRVLGKFET 332 (433)
Q Consensus 254 v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 332 (433)
+.+++++|.|||.....+.+.+...+++|+++++.++++++..++. .+.+..+++.+.+.++++|||+.++++.+||++
T Consensus 225 l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~ 304 (409)
T KOG1838|consen 225 LIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS 304 (409)
T ss_pred ceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc
Confidence 9999999999999888889999999999999999999999999888 666778899999999999999999999999999
Q ss_pred HHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCC-cHHHHHHHH
Q 013936 333 VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSL-WWVRAVNVF 411 (433)
Q Consensus 333 ~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~-w~~~~v~~F 411 (433)
+++||+++|+.+++++|++|+|+|++.|||++|.+.++...++.+||+-++++.+|||+||+||+.+... |+.+.+.+|
T Consensus 305 ~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef 384 (409)
T KOG1838|consen 305 VDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEF 384 (409)
T ss_pred HHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999766554 666669999
Q ss_pred HHHhccCCcccccc
Q 013936 412 LDALNTSPYVNRST 425 (433)
Q Consensus 412 l~~~~~~~~~~~~~ 425 (433)
+..+........++
T Consensus 385 ~~~~~~~~~~~~~~ 398 (409)
T KOG1838|consen 385 LGNAIFQDEVGRHR 398 (409)
T ss_pred HHHHHhhhcccccC
Confidence 99888766655443
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=4.7e-59 Score=419.29 Aligned_cols=318 Identities=35% Similarity=0.606 Sum_probs=289.6
Q ss_pred CCCC-CCCCCcccHHHHhh--hhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECC
Q 013936 86 RYLP-TPWLSSPHLQTAFL--TFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPG 162 (433)
Q Consensus 86 ~y~p-~~~~~~~~lqt~~~--~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG 162 (433)
.|.| +.|++|||+||+++ ..+++.+.+.|+||.+.++||+.+.+||..++. +..+|.||++||
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~--------------~~~~P~vVl~HG 83 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR--------------AAKKPLVVLFHG 83 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc--------------ccCCceEEEEec
Confidence 5777 68899999999998 667888999999999999999999999998643 556799999999
Q ss_pred CCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH
Q 013936 163 LTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILV 242 (433)
Q Consensus 163 ~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~ 242 (433)
+.|++++.|++.+++.+.++||.||++|.|||+++..++++.|+.++++|++.++++++...+..|+.+||+|+||++..
T Consensus 84 L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa 163 (345)
T COG0429 84 LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLA 163 (345)
T ss_pred cCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhc-c-CC-HHHHhcCCCHHHH
Q 013936 243 KYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR-L-AD-WEGITKSRSIRDF 319 (433)
Q Consensus 243 ~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~ 319 (433)
+|+++.++++++.+++++|.|+|+..+...+...+..++|++.+...+++.+..+...+.. . .+ .+.+++.++++||
T Consensus 164 ~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eF 243 (345)
T COG0429 164 NYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREF 243 (345)
T ss_pred HHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhc
Confidence 9999999999999999999999999998888877655899999999998888876666522 1 22 4578889999999
Q ss_pred HHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcC
Q 013936 320 DNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITA 399 (433)
Q Consensus 320 d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~ 399 (433)
|+.+|.+.+||.++++||+++|+.+.|++|++|+|+||+.|||+++++.++......+|++.+.++++|||+||+.+...
T Consensus 244 D~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~ 323 (345)
T COG0429 244 DDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLL 323 (345)
T ss_pred cceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccc
Confidence 99999999999999999999999999999999999999999999999999987667999999999999999999997433
Q ss_pred CC-CcHHHHHHHHHHHhcc
Q 013936 400 KS-LWWVRAVNVFLDALNT 417 (433)
Q Consensus 400 ~~-~w~~~~v~~Fl~~~~~ 417 (433)
+. .|..+++.+|++...+
T Consensus 324 ~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 324 HPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred cchhhHHHHHHHHHHHHHh
Confidence 33 3889999999998765
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=8.9e-55 Score=424.15 Aligned_cols=346 Identities=36% Similarity=0.655 Sum_probs=289.2
Q ss_pred CeEEEEcCChHHHHHHHhhcccccCCCCCCCCCCcccHHHHhhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccC
Q 013936 61 PVYLTYSASSKLYQSLAAKCHVLHGRYLPTPWLSSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQG 140 (433)
Q Consensus 61 ~~~l~~~~~~~~~~~~~~~~~~l~~~y~p~~~~~~~~lqt~~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~ 140 (433)
++..+++.....+++++++||.|..+|.|++|++|||+||++..++++.+.+.|+|+.+.++||+++.+||+.+...
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~--- 94 (388)
T PLN02511 18 REHSSLEVIGGGRDSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDR--- 94 (388)
T ss_pred CCccceeeccchHHHHHHhhhhhcCCccCCccCCCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccc---
Confidence 34444444445579999999999999999999999999999999998888899999999999999999999864220
Q ss_pred CccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHH
Q 013936 141 STHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYL 220 (433)
Q Consensus 141 ~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l 220 (433)
....++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+.+.++.+..++++|+.++++++
T Consensus 95 --------~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l 166 (388)
T PLN02511 95 --------ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHV 166 (388)
T ss_pred --------cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHH
Confidence 023467999999999988877788888888889999999999999999988777788889999999999999
Q ss_pred HHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 013936 221 HCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQST 300 (433)
Q Consensus 221 ~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 300 (433)
+.+++..+++++||||||+++++|++++++..+|.+++++++|++.......+... ....|...+...+++....+...
T Consensus 167 ~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~~~~l~~~~~~~~~~ 245 (388)
T PLN02511 167 AGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKALAKALRKIFAKHALL 245 (388)
T ss_pred HHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999889999999999999999999999855699999999999875444444333 24567777766666655543333
Q ss_pred hhc---cCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcC
Q 013936 301 VAR---LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRAN 377 (433)
Q Consensus 301 ~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~ 377 (433)
+.. ..+...+...+++++|++.++.+..+|.+.++||+..++...+++|++|+|+|+|++|+++|.+..+....+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~ 325 (388)
T PLN02511 246 FEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKAN 325 (388)
T ss_pred HhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcC
Confidence 322 23455667788999999999999999999999999999999999999999999999999999887765566788
Q ss_pred CCeEEEEcCCCCeeeeccCCc--CCCCcHHHHHHHHHHHhccC
Q 013936 378 EKIILATTRHGGHLAFYEGIT--AKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 378 ~~~~l~~~~~gGH~~~~e~~~--~~~~w~~~~v~~Fl~~~~~~ 418 (433)
|+++++++++|||++|+|+.. ....|+++.+.+||+.+.+.
T Consensus 326 p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 326 PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999999999999999742 12459999999999988764
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=5.8e-49 Score=375.80 Aligned_cols=318 Identities=26% Similarity=0.420 Sum_probs=267.6
Q ss_pred CCCCCCCCCCcccHHHHhhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC
Q 013936 85 GRYLPTPWLSSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT 164 (433)
Q Consensus 85 ~~y~p~~~~~~~~lqt~~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~ 164 (433)
.+|.||+|+.|+|+||++..++++.+.++++|+.++++||+.+.++|...++ ..+.+|+||++||++
T Consensus 2 ~~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~-------------~~~~~p~vll~HG~~ 68 (324)
T PRK10985 2 AEFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA-------------QARHKPRLVLFHGLE 68 (324)
T ss_pred CCCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc-------------cCCCCCEEEEeCCCC
Confidence 4699999999999999999999888889999999999999999999975432 234579999999999
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHH
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKY 244 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~ 244 (433)
|++.+.|++.++..|.++||+|+++|+||||+++...++.+..+..+|+.+++++++++++..+++++||||||++++.+
T Consensus 69 g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 69 GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHH
Confidence 88777888889999999999999999999999876656677777889999999999998888899999999999999999
Q ss_pred HhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhc--cCCHHHHhcCCCHHHHHHh
Q 013936 245 LGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR--LADWEGITKSRSIRDFDNH 322 (433)
Q Consensus 245 a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~ 322 (433)
+++++++.++.++|++++|++...+...+... ..++|.+.+...+++........+.. ..+.+.+...+++++||+.
T Consensus 149 ~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 149 LAKEGDDLPLDAAVIVSAPLMLEACSYRMEQG-FSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred HHhhCCCCCccEEEEEcCCCCHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 99987654699999999999987766555443 24567776666665544333222222 2345667788999999999
Q ss_pred hhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCc-CCC
Q 013936 323 ATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGIT-AKS 401 (433)
Q Consensus 323 ~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~-~~~ 401 (433)
++.+..+|.+..+||...+....+++|++|+++|+|++|++++.+..+. ..+..++++++++++|||++|+||.. ...
T Consensus 228 ~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 228 ITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred heeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceeeCCCCCCCCC
Confidence 9999999999999999999889999999999999999999999887765 45677899999999999999999854 345
Q ss_pred CcHHHHHHHHHHHhcc
Q 013936 402 LWWVRAVNVFLDALNT 417 (433)
Q Consensus 402 ~w~~~~v~~Fl~~~~~ 417 (433)
.|+++.+.+|++.+..
T Consensus 307 ~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 307 MWLEQRIPDWLTTYLE 322 (324)
T ss_pred ccHHHHHHHHHHHhhc
Confidence 6999999999987653
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2.3e-27 Score=227.83 Aligned_cols=281 Identities=15% Similarity=0.116 Sum_probs=169.8
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.+.++++.++..||.++.+..+.+++ ..+.+++|||+||++++. ..++..++..|.++||+|+++|
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~-------------~~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D 94 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSS-------------SSPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALD 94 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCC-------------CCCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEec
Confidence 36778888999999999997655432 124578999999996543 4445677888999999999999
Q ss_pred CCCCCCCCCCCCC-cccCCChHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 191 HRGLGGISLTSDC-FYNGGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 191 ~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~--~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
+||||.|+..... .......+|+.+++++++.. +++.+++++||||||++++.++.++|+ +++++|++++.....
T Consensus 95 ~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 95 LEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKIS 172 (330)
T ss_pred CCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCC
Confidence 9999998643221 11123568999999999864 345689999999999999999999887 799999998765432
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCC---C---HHHHHhhC-
Q 013936 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFE---T---VDAYYRHS- 340 (433)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~---~~~y~~~~- 340 (433)
.... ........ ... +..+.. ..........+...................+. . ..+..+..
T Consensus 173 ~~~~--~~~~~~~~-~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (330)
T PLN02298 173 DKIR--PPWPIPQI-LTF----VARFLP----TLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD 241 (330)
T ss_pred cccC--CchHHHHH-HHH----HHHHCC----CCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH
Confidence 1100 00000000 000 000000 00000000000000000000000000000011 0 11111110
Q ss_pred CcccccCCCccceEEEeeCCCCcCCCCCCChhHHh-cCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 341 SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECR-ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 341 s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~-~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
.....+.+|++|+|+|+|++|+++|.+........ ..++.++++++++||..+++........+.+.+.+||++....
T Consensus 242 ~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 242 YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 11346788999999999999999998865542222 3468899999999999988742111134668889999987643
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=3.1e-26 Score=221.60 Aligned_cols=279 Identities=14% Similarity=0.110 Sum_probs=162.2
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.+.+++.++..+||.++....+.|++ ++.+|+|||+||++++ ...|++.++..|.++||+|+++|
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~--------------~~~~~~iv~lHG~~~~-~~~~~~~~~~~l~~~g~~v~~~D 122 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPEN--------------SRPKAAVCFCHGYGDT-CTFFFEGIARKIASSGYGVFAMD 122 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCC--------------CCCCeEEEEECCCCCc-cchHHHHHHHHHHhCCCEEEEec
Confidence 34444555566677776665444432 3467899999999654 34556888999998999999999
Q ss_pred CCCCCCCCCCCCCc-ccCCChHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 191 HRGLGGISLTSDCF-YNGGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 191 ~rG~G~s~~~~~~~-~~~~~~~Dl~~~i~~l~~~--~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
+||||.|+...... ....+.+|+.++++.+..+ ++..+++++||||||++++.++.++|+ +++++|++++.....
T Consensus 123 ~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~ 200 (349)
T PLN02385 123 YPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIA 200 (349)
T ss_pred CCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEeccccccc
Confidence 99999997542211 1234567888888777653 345689999999999999999999998 799999998754321
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhcc---CCCCCHHHHHhhC-Ccc
Q 013936 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL---GKFETVDAYYRHS-SSA 343 (433)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~y~~~~-s~~ 343 (433)
... ........+... +....... .........+.........+......... ..+....+.++.. ...
T Consensus 201 ~~~--~~~~~~~~~~~~-----~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 272 (349)
T PLN02385 201 DDV--VPPPLVLQILIL-----LANLLPKA-KLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIE 272 (349)
T ss_pred ccc--cCchHHHHHHHH-----HHHHCCCc-eecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHH
Confidence 100 000000011000 00000000 00000000000000000000000000000 0111112222211 223
Q ss_pred cccCCCccceEEEeeCCCCcCCCCCCChhHHh-cCCCeEEEEcCCCCeeeeccCCcCCCC--cHHHHHHHHHHHhc
Q 013936 344 NFVRNVSVPLLCISTLDDPVCTREAIPWDECR-ANEKIILATTRHGGHLAFYEGITAKSL--WWVRAVNVFLDALN 416 (433)
Q Consensus 344 ~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~-~~~~~~l~~~~~gGH~~~~e~~~~~~~--w~~~~v~~Fl~~~~ 416 (433)
..+.+|++|+|+|+|++|.++|.+........ ..+++++.+++++||..+.|. ++.. -+.+.+.+||++..
T Consensus 273 ~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~--p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 273 MQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGE--PDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCC--ChhhHHHHHHHHHHHHHHhc
Confidence 46788999999999999999998765442222 246799999999999988774 3321 25677888988654
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=1e-25 Score=210.91 Aligned_cols=263 Identities=14% Similarity=0.123 Sum_probs=161.3
Q ss_pred EEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 118 ~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
.+..+||..+.+.++.|. +..+++|+++||+++++ .+++.+++.|.++||+|+++|+||||.|
T Consensus 4 ~~~~~~g~~l~~~~~~~~---------------~~~~~~v~llHG~~~~~--~~~~~~~~~l~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI---------------TYPKALVFISHGAGEHS--GRYEELAENISSLGILVFSHDHIGHGRS 66 (276)
T ss_pred eeecCCCCEEEEEeccCC---------------CCCCEEEEEeCCCcccc--chHHHHHHHHHhCCCEEEEccCCCCCCC
Confidence 456789999999877663 23558888889996543 4458899999999999999999999998
Q ss_pred CCCCCCc-ccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhh
Q 013936 198 SLTSDCF-YNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRR 276 (433)
Q Consensus 198 ~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~ 276 (433)
+...... ....+.+|+.+.++.+++.++..+++++||||||++++.++.++|+ +++++|+++++......
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~------- 137 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAV------- 137 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccc-------
Confidence 7532111 1123346777777777777777889999999999999999999888 79999999986542110
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccC---CCCC--HHHHHhh-CCcccccCCCc
Q 013936 277 LVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLG---KFET--VDAYYRH-SSSANFVRNVS 350 (433)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~--~~~y~~~-~s~~~~l~~i~ 350 (433)
.....+...+. ..... .... .......+ .+...+.......+.. .... ..+.... ......+.+++
T Consensus 138 ~~~~~~~~~~~----~~~~~-~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 209 (276)
T PHA02857 138 PRLNLLAAKLM----GIFYP-NKIV-GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIK 209 (276)
T ss_pred cHHHHHHHHHH----HHhCC-CCcc-CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCC
Confidence 00001111000 00000 0000 00000000 0011111011000000 0000 0111110 11235678999
Q ss_pred cceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 351 VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 351 ~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
+|+|+|+|++|.++|.+..........+++++.+++++||..+.|.. ....-+.+.+.+||+..
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 99999999999999988665533334457899999999999998831 11223557788888864
No 8
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.93 E-value=4.5e-24 Score=199.97 Aligned_cols=274 Identities=18% Similarity=0.176 Sum_probs=173.8
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
....++.+...||..+.++.+.+.. +.+.+||++||++.+ ...| ..++..|..+||.|+++|+
T Consensus 7 ~~~~~~~~~~~d~~~~~~~~~~~~~---------------~~~g~Vvl~HG~~Eh-~~ry-~~la~~l~~~G~~V~~~D~ 69 (298)
T COG2267 7 RTRTEGYFTGADGTRLRYRTWAAPE---------------PPKGVVVLVHGLGEH-SGRY-EELADDLAARGFDVYALDL 69 (298)
T ss_pred cccccceeecCCCceEEEEeecCCC---------------CCCcEEEEecCchHH-HHHH-HHHHHHHHhCCCEEEEecC
Confidence 3456778899999999988765432 333789999999654 5667 6799999999999999999
Q ss_pred CCCCCCC-CCCCCc-ccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH
Q 013936 192 RGLGGIS-LTSDCF-YNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (433)
Q Consensus 192 rG~G~s~-~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~ 269 (433)
||||.|. ...... ....+.+|+.++++.+...++..|++++||||||.|++.|+.+++. +++++|+.+|.+....
T Consensus 70 RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~- 146 (298)
T COG2267 70 RGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGG- 146 (298)
T ss_pred CCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCCh-
Confidence 9999997 322211 1234568999999999888889999999999999999999999986 7999999888776643
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhh--hhhhhccCCHHHHhcCCCHHHHHHhhhhcc--CCCCC---HHHHHhhCC-
Q 013936 270 DRFINRRLVQKCYDRVIAIGLRGFAQLH--QSTVARLADWEGITKSRSIRDFDNHATRVL--GKFET---VDAYYRHSS- 341 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~---~~~y~~~~s- 341 (433)
... ...........+.+..... ............+ .+.....+.....+. .+..+ +..+.....
T Consensus 147 --~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~ 218 (298)
T COG2267 147 --AIL----RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDL--SRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV 218 (298)
T ss_pred --hHH----HHHHHHHhcccccccccccccCcccccCcCcchh--hcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc
Confidence 000 0011111111111100000 0000000000011 112222222222221 11111 122222222
Q ss_pred -cccccCCCccceEEEeeCCCCcCC-CCCCC-hhHHhcCCCeEEEEcCCCCeeeeccCCcCCC--CcHHHHHHHHHHHhc
Q 013936 342 -SANFVRNVSVPLLCISTLDDPVCT-REAIP-WDECRANEKIILATTRHGGHLAFYEGITAKS--LWWVRAVNVFLDALN 416 (433)
Q Consensus 342 -~~~~l~~i~~P~Lii~g~dD~ivp-~~~~~-~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~--~w~~~~v~~Fl~~~~ 416 (433)
......++++|+|+++|++|++++ .+... .......+++++++++++.|-.+.|. +. .-+.+.+.+|++...
T Consensus 219 ~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~---~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 219 PALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEP---DRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCc---chHHHHHHHHHHHHHHhhc
Confidence 334466889999999999999999 45333 23456778899999999999999983 33 234566777776543
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=7.2e-24 Score=201.09 Aligned_cols=269 Identities=14% Similarity=0.098 Sum_probs=151.0
Q ss_pred CCCCCCcceEEEEcCC--CCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCce
Q 013936 108 RAPDISYKRHLFQTPD--GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWN 185 (433)
Q Consensus 108 ~~~~~~~~r~~~~~~D--G~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~ 185 (433)
..+.+++...++.+.+ |+...+.+... +++..|+|||+||+++++ .. |..+++.|.++||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~i~y~~~---------------G~~~~~~lvliHG~~~~~-~~-w~~~~~~L~~~gy~ 75 (302)
T PRK00870 13 NLPDYPFAPHYVDVDDGDGGPLRMHYVDE---------------GPADGPPVLLLHGEPSWS-YL-YRKMIPILAAAGHR 75 (302)
T ss_pred CCcCCCCCceeEeecCCCCceEEEEEEec---------------CCCCCCEEEEECCCCCch-hh-HHHHHHHHHhCCCE
Confidence 3455666666666664 66555554432 122457899999996543 33 57899999888999
Q ss_pred EEEEeCCCCCCCCCCCC-Cccc-CCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 186 VVVSNHRGLGGISLTSD-CFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 186 vv~~d~rG~G~s~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
|+++|+||||.|+.... ..+. ..+.+|+.++++.+ +..+++++||||||.++..++.++|+ ++.++|++++.
T Consensus 76 vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 149 (302)
T PRK00870 76 VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTG 149 (302)
T ss_pred EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCC
Confidence 99999999999865322 1121 22334444444433 44579999999999999999999988 79999999864
Q ss_pred CChHHH--HHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHh---c-------CCCHHHHHHhhhhccCCCC
Q 013936 264 WDLLIC--DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGIT---K-------SRSIRDFDNHATRVLGKFE 331 (433)
Q Consensus 264 ~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~d~~~~~~~~~~~ 331 (433)
...... ..... .+ .++........+....... .......+... . ......+.... ..+..
T Consensus 150 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 221 (302)
T PRK00870 150 LPTGDGPMPDAFW-AW-RAFSQYSPVLPVGRLVNGG---TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLV---PTSPD 221 (302)
T ss_pred CCCccccchHHHh-hh-hcccccCchhhHHHHhhcc---ccccCCHHHHHHhhcccCChhhhcchhhhhhcC---CCCCC
Confidence 321110 00000 00 0000000000000000000 00000000000 0 00000000000 00000
Q ss_pred CHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeE---EEEcCCCCeeeeccCCcCCCCcHHHHH
Q 013936 332 TVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKII---LATTRHGGHLAFYEGITAKSLWWVRAV 408 (433)
Q Consensus 332 ~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~---l~~~~~gGH~~~~e~~~~~~~w~~~~v 408 (433)
... ..........+.++++|+++|+|++|+++|.+. . ...+..++.+ +++++++||+.++|. ++ .+.+.+
T Consensus 222 ~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~--p~--~~~~~l 294 (302)
T PRK00870 222 DPA-VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-A-ILQKRIPGAAGQPHPTIKGAGHFLQEDS--GE--ELAEAV 294 (302)
T ss_pred Ccc-hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-H-HHHhhcccccccceeeecCCCccchhhC--hH--HHHHHH
Confidence 000 000000113567899999999999999999755 3 3566667665 889999999999883 33 588999
Q ss_pred HHHHHH
Q 013936 409 NVFLDA 414 (433)
Q Consensus 409 ~~Fl~~ 414 (433)
.+|++.
T Consensus 295 ~~fl~~ 300 (302)
T PRK00870 295 LEFIRA 300 (302)
T ss_pred HHHHhc
Confidence 999864
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.92 E-value=2.4e-24 Score=201.70 Aligned_cols=245 Identities=14% Similarity=0.150 Sum_probs=148.7
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
..++|||+||+++++ . .|..+++.|.+ +|+|+++|+||||.|+..........+.+|+.++++++. ..+++++
T Consensus 24 ~~~plvllHG~~~~~-~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~Lv 96 (276)
T TIGR02240 24 GLTPLLIFNGIGANL-E-LVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAI 96 (276)
T ss_pred CCCcEEEEeCCCcch-H-HHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEE
Confidence 346799999997654 3 34788888865 699999999999999754222222345567777766653 3579999
Q ss_pred EechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHH---HHHhh-hhhHHHHHHHHHHHHHHHHHhhhhhhhcc--CC
Q 013936 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD---RFINR-RLVQKCYDRVIAIGLRGFAQLHQSTVARL--AD 306 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~---~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~ 306 (433)
||||||.+++.+|.++|+ +++++|+++++....... ..... ........... .. ... ...+... .+
T Consensus 97 G~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~---~~~~~~~~~~~ 168 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSH--GI-HIA---PDIYGGAFRRD 168 (276)
T ss_pred EECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCchhhhcccc--cc-chh---hhhccceeecc
Confidence 999999999999999998 799999998765421100 00000 00000000000 00 000 0000000 00
Q ss_pred HHHHhcCCCHHHHHHhhhhccCCCCCHHHHHh--hCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEE
Q 013936 307 WEGITKSRSIRDFDNHATRVLGKFETVDAYYR--HSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILAT 384 (433)
Q Consensus 307 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~--~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~ 384 (433)
.+ ....+..... ............. .......+.+|++|+|+|+|++|+++|++.... .....++.++++
T Consensus 169 ~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~-l~~~~~~~~~~~ 240 (276)
T TIGR02240 169 PE------LAMAHASKVR-SGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL-LAWRIPNAELHI 240 (276)
T ss_pred ch------hhhhhhhhcc-cCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH-HHHhCCCCEEEE
Confidence 00 0000000000 0000000111111 111234578999999999999999999876554 566778999999
Q ss_pred cCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccCCcccccc
Q 013936 385 TRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTSPYVNRST 425 (433)
Q Consensus 385 ~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~~~~~~~~ 425 (433)
++ +||+.+.|. ++ .+.+.+.+|++.......+++++
T Consensus 241 i~-~gH~~~~e~--p~--~~~~~i~~fl~~~~~~~~~~~~~ 276 (276)
T TIGR02240 241 ID-DGHLFLITR--AE--AVAPIIMKFLAEERQRAVMHPRP 276 (276)
T ss_pred Ec-CCCchhhcc--HH--HHHHHHHHHHHHhhhhccCCCCC
Confidence 97 599999873 33 58899999999998888887764
No 11
>PRK10749 lysophospholipase L2; Provisional
Probab=99.92 E-value=3.3e-24 Score=205.64 Aligned_cols=287 Identities=16% Similarity=0.114 Sum_probs=164.9
Q ss_pred cHHHHhhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHH
Q 013936 97 HLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLA 176 (433)
Q Consensus 97 ~lqt~~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~ 176 (433)
..|++...++. ..+...+...||..+.+..+.++ ..+++||++||++++ ...| ..++
T Consensus 18 ~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~----------------~~~~~vll~HG~~~~-~~~y-~~~~ 74 (330)
T PRK10749 18 FTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAP----------------HHDRVVVICPGRIES-YVKY-AELA 74 (330)
T ss_pred HHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCC----------------CCCcEEEEECCccch-HHHH-HHHH
Confidence 45666655542 33455677789988888765432 245789999999653 3445 6788
Q ss_pred HHHHhCCceEEEEeCCCCCCCCCCCCC---c---ccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCC
Q 013936 177 FKMAGHGWNVVVSNHRGLGGISLTSDC---F---YNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 177 ~~l~~~G~~vv~~d~rG~G~s~~~~~~---~---~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
..+.++||+|+++|+||||.|+...+. . ....+.+|+.++++.+...++..+++++||||||.+++.++.++|+
T Consensus 75 ~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~ 154 (330)
T PRK10749 75 YDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG 154 (330)
T ss_pred HHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC
Confidence 888899999999999999999753221 1 1124557888888887766677899999999999999999999988
Q ss_pred CCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhh---hhhhccC-CHHHHhcCC-CHHHHHHhhh-
Q 013936 251 NTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQ---STVARLA-DWEGITKSR-SIRDFDNHAT- 324 (433)
Q Consensus 251 ~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~-~~~~~~~~~-~~~~~d~~~~- 324 (433)
.++++|++++......... ......+... ... ......... ....... ..+.+.... ...++.+.+.
T Consensus 155 --~v~~lvl~~p~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 227 (330)
T PRK10749 155 --VFDAIALCAPMFGIVLPLP---SWMARRILNW-AEG-HPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYAD 227 (330)
T ss_pred --CcceEEEECchhccCCCCC---cHHHHHHHHH-HHH-hcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHh
Confidence 7999998877543211000 0000111110 000 000000000 0000000 000000000 0001111111
Q ss_pred hcc--CCCCCH---HHHHhh-CCcccccCCCccceEEEeeCCCCcCCCCCCChhHHh------cCCCeEEEEcCCCCeee
Q 013936 325 RVL--GKFETV---DAYYRH-SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECR------ANEKIILATTRHGGHLA 392 (433)
Q Consensus 325 ~~~--~~~~~~---~~y~~~-~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~------~~~~~~l~~~~~gGH~~ 392 (433)
.+. .+.... .+.... ......+.++++|+|+|+|++|++++.+........ ..+++++++++++||..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~ 307 (330)
T PRK10749 228 DPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEI 307 (330)
T ss_pred CCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchh
Confidence 110 000111 111111 112346788999999999999999998754432111 12567899999999999
Q ss_pred eccCCcCCCCcHHHHHHHHHHH
Q 013936 393 FYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 393 ~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
+.|... ...-+.+.+.+||++
T Consensus 308 ~~E~~~-~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 308 LFEKDA-MRSVALNAIVDFFNR 328 (330)
T ss_pred hhCCcH-HHHHHHHHHHHHHhh
Confidence 988411 122355778888875
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=1.5e-23 Score=198.12 Aligned_cols=241 Identities=14% Similarity=0.148 Sum_probs=139.7
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC------ccc-CCChHHHHHHHHHHHHhCCC
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC------FYN-GGWTEDLRRVIDYLHCQYPE 226 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~------~~~-~~~~~Dl~~~i~~l~~~~~~ 226 (433)
.|+|||+||+++++. . |+.++..|.++ |+|+++|+||+|.|+...+. .+. ..+.+|+.++++.+ ..
T Consensus 29 ~~~vlllHG~~~~~~-~-w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l----~~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD-H-WRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV----VG 101 (294)
T ss_pred CCeEEEECCCCCChh-H-HHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh----cC
Confidence 478999999976653 3 57889999876 79999999999999864321 121 23345555555544 34
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHH--HHHhhhhhHHHHHHHHHH-HH-HHHHHh------
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD--RFINRRLVQKCYDRVIAI-GL-RGFAQL------ 296 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-~l-~~~~~~------ 296 (433)
.+++++||||||++++.++.++|+ +|+++|+++++....... ....+.....+. ..+.. .. +.+...
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 178 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ-NLLRETAVGKAFFKSVATPET 178 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhHHHHHHH-HHHhchhHHHHHHHhhcCHHH
Confidence 689999999999999999999998 899999998754211000 000000000000 00000 00 000000
Q ss_pred hhhhhhc-cCCHHHHhcCCCHHHHHHhhhhccCCCCCHH---HHHhh---CCcccccCCCccceEEEeeCCCCcCCCCCC
Q 013936 297 HQSTVAR-LADWEGITKSRSIRDFDNHATRVLGKFETVD---AYYRH---SSSANFVRNVSVPLLCISTLDDPVCTREAI 369 (433)
Q Consensus 297 ~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~y~~~---~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~ 369 (433)
....+.. ..+... .+ .+..+.+........... ++... ......+++|++|+|+|+|++|+++|.+..
T Consensus 179 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 253 (294)
T PLN02824 179 VKNILCQCYHDDSA----VT-DELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELG 253 (294)
T ss_pred HHHHHHHhccChhh----cc-HHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHH
Confidence 0000000 000000 00 000011100000000001 11100 011245788999999999999999998765
Q ss_pred ChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 370 PWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 370 ~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
.. .....++.++++++++||+.++|. ++ .+.+.|.+|++.
T Consensus 254 ~~-~~~~~~~~~~~~i~~~gH~~~~e~--p~--~~~~~i~~fl~~ 293 (294)
T PLN02824 254 RA-YANFDAVEDFIVLPGVGHCPQDEA--PE--LVNPLIESFVAR 293 (294)
T ss_pred HH-HHhcCCccceEEeCCCCCChhhhC--HH--HHHHHHHHHHhc
Confidence 54 556677889999999999999983 33 588999999874
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=6.5e-24 Score=200.73 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=141.4
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
+|+||++||+++++ ..|+.+++.|.+++ +|+++|+||+|.|+.+........+++|+.++++.+ ...+++++|
T Consensus 27 g~~vvllHG~~~~~--~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l----~~~~~~lvG 99 (295)
T PRK03592 27 GDPIVFLHGNPTSS--YLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL----GLDDVVLVG 99 (295)
T ss_pred CCEEEEECCCCCCH--HHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCeEEEE
Confidence 46799999997553 34588999998875 999999999999986543222234456666666655 346799999
Q ss_pred echhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHH--------HHHHHhhh-hhhhcc
Q 013936 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGL--------RGFAQLHQ-STVARL 304 (433)
Q Consensus 234 ~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~~~~-~~~~~~ 304 (433)
|||||.+++.++.++|+ +++++|+++++........+ .... ...+.......+ ..+..... ......
T Consensus 100 hS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (295)
T PRK03592 100 HDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMTWDDF-PPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRP 175 (295)
T ss_pred ECHHHHHHHHHHHhChh--heeEEEEECCCCCCcchhhc-chhH-HHHHHHHhCcccccccccchhhHHhhcccCccccc
Confidence 99999999999999998 89999999874322110000 0000 000100000000 00000000 000000
Q ss_pred CCHHHHh-------cCCC---HHHHHHhhhhccCCCC-CHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhH
Q 013936 305 ADWEGIT-------KSRS---IRDFDNHATRVLGKFE-TVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDE 373 (433)
Q Consensus 305 ~~~~~~~-------~~~~---~~~~d~~~~~~~~~~~-~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~ 373 (433)
...+.+. .... ..++.... ...+.. ....... .....+.+|++|+|+|+|++|+++++.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 251 (295)
T PRK03592 176 LSDEEMAVYRRPFPTPESRRPTLSWPREL--PIDGEPADVVALVE--EYAQWLATSDVPKLLINAEPGAILTTGAIRDWC 251 (295)
T ss_pred CCHHHHHHHHhhcCCchhhhhhhhhhhhc--CCCCcchhhHhhhh--HhHHHhccCCCCeEEEeccCCcccCcHHHHHHH
Confidence 0000000 0000 00000000 000000 0000000 012356789999999999999999555443434
Q ss_pred HhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 374 CRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 374 ~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
....++.++.+++++||+.+.|. ++ .+.+.+.+|++....
T Consensus 252 ~~~~~~~~~~~i~~~gH~~~~e~--p~--~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 252 RSWPNQLEITVFGAGLHFAQEDS--PE--EIGAAIAAWLRRLRL 291 (295)
T ss_pred HHhhhhcceeeccCcchhhhhcC--HH--HHHHHHHHHHHHhcc
Confidence 55678899999999999999983 33 588999999986554
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=2.3e-23 Score=202.66 Aligned_cols=270 Identities=18% Similarity=0.162 Sum_probs=163.2
Q ss_pred ceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCC
Q 013936 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 115 ~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~ 194 (433)
....+..+||..+.+..+.|.. .+.+|+||++||++++ ...| ..++..|.++||+|+++|+|||
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~--------------~~~~~~Vl~lHG~~~~-~~~~-~~~a~~L~~~Gy~V~~~D~rGh 174 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAA--------------GEMRGILIIIHGLNEH-SGRY-LHFAKQLTSCGFGVYAMDWIGH 174 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCC--------------CCCceEEEEECCchHH-HHHH-HHHHHHHHHCCCEEEEeCCCCC
Confidence 3445667777777777655532 3456899999999654 3334 7899999999999999999999
Q ss_pred CCCCCCCCCccc-CCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCC-CCCceEEEEEcCCCChHHHHHH
Q 013936 195 GGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWDLLICDRF 272 (433)
Q Consensus 195 G~s~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~-~~~v~~~v~i~~p~~~~~~~~~ 272 (433)
|.|+........ ..+.+|+.++++++...++..+++++||||||.+++.++. +++ ..+++++|+.++.........
T Consensus 175 G~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~- 252 (395)
T PLN02652 175 GGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP- 252 (395)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH-
Confidence 999764322112 2345899999999998887789999999999999997764 443 126999999877654322111
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhcc--CCCCCHH---HHHhhC-Cccccc
Q 013936 273 INRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL--GKFETVD---AYYRHS-SSANFV 346 (433)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~---~y~~~~-s~~~~l 346 (433)
+.. ....++... ...+. +... +.......+...........+. .+..... +..+.. .....+
T Consensus 253 ~~~-~~~~l~~~~----~p~~~------~~~~-~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L 320 (395)
T PLN02652 253 IVG-AVAPIFSLV----APRFQ------FKGA-NKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNF 320 (395)
T ss_pred HHH-HHHHHHHHh----CCCCc------ccCc-ccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhc
Confidence 000 000111100 00000 0000 0000000000001111111110 0111111 111111 123567
Q ss_pred CCCccceEEEeeCCCCcCCCCCCChhHHh-cCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 347 RNVSVPLLCISTLDDPVCTREAIPWDECR-ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 347 ~~i~~P~Lii~g~dD~ivp~~~~~~~~~~-~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
.+|++|+|+++|++|.++|.+........ .+++.++.++++++|..++| ++...+.+.+.+||+...+
T Consensus 321 ~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 321 KSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred ccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 88999999999999999998766543223 34568899999999999887 3444577889999987553
No 15
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.91 E-value=1.2e-23 Score=187.91 Aligned_cols=280 Identities=15% Similarity=0.115 Sum_probs=175.1
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.+.+...+++.++|..+...++.|.. ....+..|+++||+++.+...| +.++..|+..||.|+++|
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~-------------~~~pr~lv~~~HG~g~~~s~~~-~~~a~~l~~~g~~v~a~D 89 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLS-------------GTEPRGLVFLCHGYGEHSSWRY-QSTAKRLAKSGFAVYAID 89 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCC-------------CCCCceEEEEEcCCcccchhhH-HHHHHHHHhCCCeEEEee
Confidence 45567778999999999888887744 2356778999999977654444 889999999999999999
Q ss_pred CCCCCCCCCCCCCccc-CCChHHHHHHHHHHHH--hCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 191 HRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHC--QYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 191 ~rG~G~s~~~~~~~~~-~~~~~Dl~~~i~~l~~--~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
++|||+|++....... ....+|+...++.++. .+++.|.+++||||||.|++.++.++|. -.+|+|++++-....
T Consensus 90 ~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 90 YEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKIS 167 (313)
T ss_pred ccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccC
Confidence 9999999875443222 2345788888887654 4678899999999999999999999887 688999887754432
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCC---CCCHHHHHhhCC-cc
Q 013936 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGK---FETVDAYYRHSS-SA 343 (433)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~~y~~~~s-~~ 343 (433)
.... . ..+... +...+..++.+.+ ..+.....+...+....++....-.....+ .++..+..+... ..
T Consensus 168 ~~~k--p----~p~v~~-~l~~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le 239 (313)
T KOG1455|consen 168 EDTK--P----HPPVIS-ILTLLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLE 239 (313)
T ss_pred CccC--C----CcHHHH-HHHHHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHH
Confidence 2110 0 000000 1111111111111 000000001111111111111100001112 223333333322 23
Q ss_pred cccCCCccceEEEeeCCCCcCCCCCCCh-hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 344 NFVRNVSVPLLCISTLDDPVCTREAIPW-DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 344 ~~l~~i~~P~Lii~g~dD~ivp~~~~~~-~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
+.++++++|.+++||++|.++.++.... .+...+.+.++.++|+.=|..+.-....+..-+..-|.+||++
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 6788999999999999999998886655 3456788999999999999766511112222345667788764
No 16
>PRK13604 luxD acyl transferase; Provisional
Probab=99.91 E-value=1.1e-22 Score=187.23 Aligned_cols=251 Identities=17% Similarity=0.139 Sum_probs=159.3
Q ss_pred cceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 114 YKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 114 ~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
...+.+.+.||.+|..+|..|.+. ...+.++||++||+++. ... +..+++.|.++||+|+.+|.||
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~------------~~~~~~~vIi~HGf~~~-~~~-~~~~A~~La~~G~~vLrfD~rg 74 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKEN------------SPKKNNTILIASGFARR-MDH-FAGLAEYLSSNGFHVIRYDSLH 74 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCccc------------CCCCCCEEEEeCCCCCC-hHH-HHHHHHHHHHCCCEEEEecCCC
Confidence 456788999999999999887531 24567899999999764 333 4789999999999999999999
Q ss_pred C-CCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHH
Q 013936 194 L-GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRF 272 (433)
Q Consensus 194 ~-G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~ 272 (433)
+ |.|++.-.........+|+.++++|++++. ..+++++||||||.++...|++. +++++|+.|+..++...
T Consensus 75 ~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~----~v~~lI~~sp~~~l~d~--- 146 (307)
T PRK13604 75 HVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI----DLSFLITAVGVVNLRDT--- 146 (307)
T ss_pred CCCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC----CCCEEEEcCCcccHHHH---
Confidence 7 888764332222334689999999998864 56899999999999986555532 48889988887776321
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccc
Q 013936 273 INRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVP 352 (433)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P 352 (433)
+.+.. ...+. .+ ....++...+..... .....|.+... ..++ ....++.+.++++++|
T Consensus 147 l~~~~-~~~~~--------~~---p~~~lp~~~d~~g~~--l~~~~f~~~~~--~~~~------~~~~s~i~~~~~l~~P 204 (307)
T PRK13604 147 LERAL-GYDYL--------SL---PIDELPEDLDFEGHN--LGSEVFVTDCF--KHGW------DTLDSTINKMKGLDIP 204 (307)
T ss_pred HHHhh-hcccc--------cC---ccccccccccccccc--ccHHHHHHHHH--hcCc------cccccHHHHHhhcCCC
Confidence 11100 00000 00 000000000000000 00011110000 0000 1122334567788999
Q ss_pred eEEEeeCCCCcCCCCCCChhHHhc-CCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 353 LLCISTLDDPVCTREAIPWDECRA-NEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 353 ~Lii~g~dD~ivp~~~~~~~~~~~-~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
+|+|||.+|.+||.+......... +.+.++.++++++|. +.|++ ..+..|.+++..
T Consensus 205 vLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~-l~~~~--------~~~~~~~~~~~~ 261 (307)
T PRK13604 205 FIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD-LGENL--------VVLRNFYQSVTK 261 (307)
T ss_pred EEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc-cCcch--------HHHHHHHHHHHH
Confidence 999999999999998765533333 468999999999995 44421 455667766654
No 17
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=4.4e-22 Score=193.00 Aligned_cols=246 Identities=15% Similarity=0.146 Sum_probs=138.6
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCccc-CCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
..|+|||+||+++++ .. |..++..|.+ +|+|+++|+||||.|+......+. ..+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~~~-~~-w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGASI-PH-WRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCCCH-HH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 457899999997653 33 4778888865 799999999999999764322222 23445555555543 3458999
Q ss_pred EEechhHHHHHHHHhh-cCCCCCceEEEEEcCCCChHHH---HHHHhhhhh--HHHHHHH-----HHHHHHHHH---Hhh
Q 013936 232 VGTSIGANILVKYLGE-NGVNTPLVGAAAICSPWDLLIC---DRFINRRLV--QKCYDRV-----IAIGLRGFA---QLH 297 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~-~~~~~~v~~~v~i~~p~~~~~~---~~~~~~~~~--~~~~~~~-----~~~~l~~~~---~~~ 297 (433)
+||||||.+++.++.. +|+ +|+++|+++++...... ......... ...+... ....+.... ...
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 9999999999988875 577 79999999875322100 000000000 0000000 000000000 000
Q ss_pred hhhhhcc-CCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhh------CCcccccCCCccceEEEeeCCCCcCCCCCCC
Q 013936 298 QSTVARL-ADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVCTREAIP 370 (433)
Q Consensus 298 ~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~------~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~ 370 (433)
...+... .+.. ..-.++.+.+............+... ......+++|++|+|+|+|++|+++|.+...
T Consensus 238 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~ 312 (360)
T PLN02679 238 KNILLSVYGNKE-----AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPV 312 (360)
T ss_pred HHHHHHhccCcc-----cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhH
Confidence 0000000 0000 00001111111110101111111110 1123457789999999999999999876311
Q ss_pred ----hhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhc
Q 013936 371 ----WDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (433)
Q Consensus 371 ----~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~ 416 (433)
....+..|++++++++++||+.+.|. ++ .+++.|.+||+.+.
T Consensus 313 ~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~--Pe--~~~~~I~~FL~~~~ 358 (360)
T PLN02679 313 GKYFSSLPSQLPNVTLYVLEGVGHCPHDDR--PD--LVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHHhhhccCCceEEEEcCCCCCCccccC--HH--HHHHHHHHHHHhcC
Confidence 12345678999999999999999884 33 48899999998754
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=3.8e-23 Score=194.06 Aligned_cols=241 Identities=12% Similarity=0.016 Sum_probs=136.5
Q ss_pred CCcEEEEECCCCCCChh--HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCc-ccCCChHHHHHHHHHHHHhCCCCcE
Q 013936 153 KNPIVVVIPGLTSDSAA--AYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCF-YNGGWTEDLRRVIDYLHCQYPEVPL 229 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~--~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i 229 (433)
..|+||++||++++... .++ ..+..+.++||+|+++|+||||.|+...... ......+|+.++++.+ ...++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 103 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYY-RNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKA 103 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHH-HHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCe
Confidence 34679999999654332 121 2345666779999999999999997542211 1112356666666554 34579
Q ss_pred EEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHhhhhhhhccCC
Q 013936 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRV---IAIGLRGFAQLHQSTVARLAD 306 (433)
Q Consensus 230 ~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~ 306 (433)
+++||||||.+++.++.++|+ +++++|+++++..................+... ....+.......... ....+
T Consensus 104 ~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 180 (282)
T TIGR03343 104 HLVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFD-QSLIT 180 (282)
T ss_pred eEEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccC-cccCc
Confidence 999999999999999999988 799999998753211000000000000000000 000011111000000 00000
Q ss_pred HHHHh-----cCCCHHHHHHhhhhc-cCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCe
Q 013936 307 WEGIT-----KSRSIRDFDNHATRV-LGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKI 380 (433)
Q Consensus 307 ~~~~~-----~~~~~~~~d~~~~~~-~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~ 380 (433)
..... ............... ...+. .......+++|++|+|+++|++|+++|.+.... .....|++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~-~~~~~~~~ 252 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLS-------TWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLK-LLWNMPDA 252 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccc-------cchHHHHHhhCCCCEEEEEccCCCcCCchhHHH-HHHhCCCC
Confidence 00000 000000000000000 00000 001124567899999999999999999876554 56778999
Q ss_pred EEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 381 ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 381 ~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
++++++++||+.+.|. +..+.+.+.+|++
T Consensus 253 ~~~~i~~agH~~~~e~----p~~~~~~i~~fl~ 281 (282)
T TIGR03343 253 QLHVFSRCGHWAQWEH----ADAFNRLVIDFLR 281 (282)
T ss_pred EEEEeCCCCcCCcccC----HHHHHHHHHHHhh
Confidence 9999999999998883 2358899999985
No 19
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.90 E-value=3.5e-23 Score=198.14 Aligned_cols=272 Identities=15% Similarity=0.142 Sum_probs=156.1
Q ss_pred EEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHH------------------------HH
Q 013936 119 FQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI------------------------KH 174 (433)
Q Consensus 119 ~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~------------------------~~ 174 (433)
+...||..|....+.++ +.+.+|+++||+++++...|+ ..
T Consensus 2 ~~~~~g~~l~~~~~~~~----------------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK----------------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred ccCCCCCeEEEeeeecc----------------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 45679998887765442 356799999999887754544 35
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCCCCC-CcccC---CChHHHHHHHHHHHH-------------------hCC-CCcEE
Q 013936 175 LAFKMAGHGWNVVVSNHRGLGGISLTSD-CFYNG---GWTEDLRRVIDYLHC-------------------QYP-EVPLY 230 (433)
Q Consensus 175 ~~~~l~~~G~~vv~~d~rG~G~s~~~~~-~~~~~---~~~~Dl~~~i~~l~~-------------------~~~-~~~i~ 230 (433)
+++.|.++||+|+++|+||||.|..... ..+.. ...+|+.++++.+++ .+| +.|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 7899999999999999999999875422 22212 234678888877765 455 67999
Q ss_pred EEEechhHHHHHHHHhhcCCC------CCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 013936 231 AVGTSIGANILVKYLGENGVN------TPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARL 304 (433)
Q Consensus 231 lvG~S~GG~ia~~~a~~~~~~------~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 304 (433)
++||||||++++.++.+.+.. ..++|+|++++++......... .......... +...+..+...... ...
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~-~~~~~~~~~~-l~~~~~~~~p~~~~--~~~ 221 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDD-SFKFKYFYLP-VMNFMSRVFPTFRI--SKK 221 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCC-cchhhhhHHH-HHHHHHHHCCcccc--cCc
Confidence 999999999999998765431 2589999898876542100000 0000000000 01111111110000 000
Q ss_pred CCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCC-cccccCCC--ccceEEEeeCCCCcCCCCCCChhHH-hcCCCe
Q 013936 305 ADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSS-SANFVRNV--SVPLLCISTLDDPVCTREAIPWDEC-RANEKI 380 (433)
Q Consensus 305 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s-~~~~l~~i--~~P~Lii~g~dD~ivp~~~~~~~~~-~~~~~~ 380 (433)
.............+.|..............+.+.... ....+.++ ++|+|+++|++|++++.+....... ...+++
T Consensus 222 ~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~ 301 (332)
T TIGR01607 222 IRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNK 301 (332)
T ss_pred cccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCc
Confidence 0000000000011111111000000111122222111 11234555 7999999999999999875544222 244789
Q ss_pred EEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 381 ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 381 ~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
++.++++++|..+.| .+..-+.+.+.+||+
T Consensus 302 ~l~~~~g~~H~i~~E---~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 302 ELHTLEDMDHVITIE---PGNEEVLKKIIEWIS 331 (332)
T ss_pred EEEEECCCCCCCccC---CCHHHHHHHHHHHhh
Confidence 999999999999988 333346677888875
No 20
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.90 E-value=4.2e-23 Score=191.07 Aligned_cols=232 Identities=11% Similarity=0.082 Sum_probs=134.2
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
|+|||+||+++++ ..|+.++..|.+ +|+|+++|+||||.|+... .+ ..+++.+ .+... ...+++++||
T Consensus 14 ~~ivllHG~~~~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~---~~~~~~~---~l~~~-~~~~~~lvGh 81 (256)
T PRK10349 14 VHLVLLHGWGLNA--EVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG--AL---SLADMAE---AVLQQ-APDKAIWLGW 81 (256)
T ss_pred CeEEEECCCCCCh--hHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC--CC---CHHHHHH---HHHhc-CCCCeEEEEE
Confidence 5699999996554 345788998876 5999999999999987432 11 1233333 33332 2467999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHH--HHhhhhhHHHHHHH---HHHHHHHHHHhhhhhhhccCCHHH
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR--FINRRLVQKCYDRV---IAIGLRGFAQLHQSTVARLADWEG 309 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~--~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~ 309 (433)
||||.+++.+|.++|+ +++++|+++++........ .........+.... +...+..+..... ... .....
T Consensus 82 S~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 156 (256)
T PRK10349 82 SLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGT-ETARQ 156 (256)
T ss_pred CHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccC-chHHH
Confidence 9999999999999888 7999999876422110000 00000000010000 0001111110000 000 00000
Q ss_pred HhcCCCHHHHHHhhhh-ccCCCCC---HHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEc
Q 013936 310 ITKSRSIRDFDNHATR-VLGKFET---VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATT 385 (433)
Q Consensus 310 ~~~~~~~~~~d~~~~~-~~~~~~~---~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~ 385 (433)
...++...... ....... ..+.+...+....+.++++|+|+|+|++|+++|.+... ...+..++.+++++
T Consensus 157 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~i~~~~~~~i 230 (256)
T PRK10349 157 -----DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP-MLDKLWPHSESYIF 230 (256)
T ss_pred -----HHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH-HHHHhCCCCeEEEe
Confidence 00011111000 0000000 11222333445678899999999999999999876543 35677799999999
Q ss_pred CCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 386 RHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 386 ~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
+++||+.++|. ++ .+.+.+.+|-+
T Consensus 231 ~~~gH~~~~e~--p~--~f~~~l~~~~~ 254 (256)
T PRK10349 231 AKAAHAPFISH--PA--EFCHLLVALKQ 254 (256)
T ss_pred CCCCCCccccC--HH--HHHHHHHHHhc
Confidence 99999999983 33 57888888754
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.90 E-value=2.7e-23 Score=189.64 Aligned_cols=234 Identities=12% Similarity=0.122 Sum_probs=133.6
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
.|+||++||++++ ... ++.++..|.+ +|+|+++|+||+|.|+.... .++.++++.+.... ..+++++|
T Consensus 4 ~~~iv~~HG~~~~-~~~-~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGWGMN-AEV-FRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCCCCc-hhh-HHHHHHhhcc-CeEEEEecCCcCccCCCCCC--------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 3679999999654 333 4788888865 69999999999999864321 12344444444433 35899999
Q ss_pred echhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHH---hhhhhHHHHHHHHHHHHHHHHHhhhh-hhhccCCHHH
Q 013936 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI---NRRLVQKCYDRVIAIGLRGFAQLHQS-TVARLADWEG 309 (433)
Q Consensus 234 ~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~ 309 (433)
|||||.+++.++.++|+ +++++|++++.........+. .......+. ..+............. .........
T Consensus 72 ~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 147 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQ-QQLSDDYQRTIERFLALQTLGTPTAR- 147 (245)
T ss_pred EcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHH-HHhhhhHHHHHHHHHHHHHhcCCccc-
Confidence 99999999999999988 799999887643221100000 000000000 0000000000000000 000000000
Q ss_pred HhcCCCHHHHHHhhhhc-cCCCCCHHH---HHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEc
Q 013936 310 ITKSRSIRDFDNHATRV-LGKFETVDA---YYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATT 385 (433)
Q Consensus 310 ~~~~~~~~~~d~~~~~~-~~~~~~~~~---y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~ 385 (433)
.....+....... ......... .+...+....+.+|++|+++++|++|+++|.+.... ..+..+++++.++
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~ 222 (245)
T TIGR01738 148 ----QDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY-LDKLAPHSELYIF 222 (245)
T ss_pred ----hHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH-HHHhCCCCeEEEe
Confidence 0000111110000 000001111 111222335678999999999999999999876543 5667889999999
Q ss_pred CCCCeeeeccCCcCCCCcHHHHHHHHH
Q 013936 386 RHGGHLAFYEGITAKSLWWVRAVNVFL 412 (433)
Q Consensus 386 ~~gGH~~~~e~~~~~~~w~~~~v~~Fl 412 (433)
+++||+.++|. ++ .+.+.+.+|+
T Consensus 223 ~~~gH~~~~e~--p~--~~~~~i~~fi 245 (245)
T TIGR01738 223 AKAAHAPFLSH--AE--AFCALLVAFK 245 (245)
T ss_pred CCCCCCccccC--HH--HHHHHHHhhC
Confidence 99999999984 33 4788888874
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.90 E-value=1.9e-22 Score=198.86 Aligned_cols=251 Identities=11% Similarity=0.142 Sum_probs=135.2
Q ss_pred CCCcEEEEECCCCCCChhHHHHH-HHHHHH---hCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHH-HHHHHhCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKH-LAFKMA---GHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVI-DYLHCQYPE 226 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~-~~~~l~---~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i-~~l~~~~~~ 226 (433)
+.+|+|||+||++++. ..| .. +...+. +++|+|+++|+||||.|+......+. .++..+.+ ..+.+..+.
T Consensus 199 ~~k~~VVLlHG~~~s~-~~W-~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt---l~~~a~~l~~~ll~~lg~ 273 (481)
T PLN03087 199 KAKEDVLFIHGFISSS-AFW-TETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT---LREHLEMIERSVLERYKV 273 (481)
T ss_pred CCCCeEEEECCCCccH-HHH-HHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC---HHHHHHHHHHHHHHHcCC
Confidence 3457899999997654 333 43 334444 46899999999999999754333222 23333333 234445556
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHH----HHhhhh-hHHHHHHH-HHHHHHHHHHhhhhh
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR----FINRRL-VQKCYDRV-IAIGLRGFAQLHQST 300 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~----~~~~~~-~~~~~~~~-~~~~l~~~~~~~~~~ 300 (433)
.+++++||||||.+++.++.++|+ +|+++|+++++........ ...+.. ....+... +..............
T Consensus 274 ~k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 351 (481)
T PLN03087 274 KSFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRT 351 (481)
T ss_pred CCEEEEEECHHHHHHHHHHHhChH--hccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhh
Confidence 789999999999999999999998 7999999987654321110 000000 00000000 000000000000000
Q ss_pred h----hccCC-HHH---HhcCCCHHH-HHHhhhhccC--CCCCHHHHHhh------CCcccccCCCccceEEEeeCCCCc
Q 013936 301 V----ARLAD-WEG---ITKSRSIRD-FDNHATRVLG--KFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPV 363 (433)
Q Consensus 301 ~----~~~~~-~~~---~~~~~~~~~-~d~~~~~~~~--~~~~~~~y~~~------~s~~~~l~~i~~P~Lii~g~dD~i 363 (433)
. ..... ++. ......... ..+.+..... .+.....+... ......+++|++|+|+|+|++|++
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~i 431 (481)
T PLN03087 352 ICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDEL 431 (481)
T ss_pred hhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCC
Confidence 0 00000 000 000000000 0000000000 00000000000 000122347899999999999999
Q ss_pred CCCCCCChhHHhcCCCeEEEEcCCCCeeeec-cCCcCCCCcHHHHHHHHHHH
Q 013936 364 CTREAIPWDECRANEKIILATTRHGGHLAFY-EGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 364 vp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~-e~~~~~~~w~~~~v~~Fl~~ 414 (433)
+|++.... ..+..|++++++++++||+.++ | ++..+++.+.+|.+.
T Consensus 432 vP~~~~~~-la~~iP~a~l~vI~~aGH~~~v~e----~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 432 IPVECSYA-VKAKVPRARVKVIDDKDHITIVVG----RQKEFARELEEIWRR 478 (481)
T ss_pred CCHHHHHH-HHHhCCCCEEEEeCCCCCcchhhc----CHHHHHHHHHHHhhc
Confidence 99887655 5677899999999999999886 5 233588888888753
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.89 E-value=2e-22 Score=188.45 Aligned_cols=246 Identities=15% Similarity=0.124 Sum_probs=135.9
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCccc-CCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
..|+||++||++++. .. ++.++..|.+ +|+|+++|+||+|.|+.+....++ ..+.+|+.++++ .....++++
T Consensus 27 ~~~~vv~~hG~~~~~-~~-~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~----~~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGAST-HS-WRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCA----AEGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCCCH-HH-HHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHH----HcCCCCceE
Confidence 457899999996653 33 4778888865 699999999999998754331222 223344444443 334567999
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHhhhhhhhccC-CHHH
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYD-RVIAIGLRGFAQLHQSTVARLA-DWEG 309 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~-~~~~ 309 (433)
+||||||++++.++..+++ +++++|++++.................+... ......+............... ....
T Consensus 100 vG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGS 177 (278)
T ss_pred EEECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcccc
Confidence 9999999999999999887 7999999887544211100000000000000 0000000000000000000000 0000
Q ss_pred HhcCCCHHHHHHhhhhccCCCCCHHHHHhh---CCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcC
Q 013936 310 ITKSRSIRDFDNHATRVLGKFETVDAYYRH---SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (433)
Q Consensus 310 ~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~---~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~ 386 (433)
.........+....... .......++... ......+++|++|+++|+|++|.++|.+.... ..+..+++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~-~~~~~~~~~~~~~~ 255 (278)
T TIGR03056 178 LLDKAGMTYYGRLIRSP-AHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR-AATRVPTATLHVVP 255 (278)
T ss_pred ccccchhhHHHHhhcCc-hhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH-HHHhccCCeEEEEC
Confidence 00000000111100000 000011111111 11124577899999999999999999875544 56678899999999
Q ss_pred CCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 387 HGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 387 ~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
++||+.+.|. ++ .+.+.|.+|++
T Consensus 256 ~~gH~~~~e~--p~--~~~~~i~~f~~ 278 (278)
T TIGR03056 256 GGGHLVHEEQ--AD--GVVGLILQAAE 278 (278)
T ss_pred CCCCcccccC--HH--HHHHHHHHHhC
Confidence 9999998873 33 48888888874
No 24
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=3.1e-23 Score=176.49 Aligned_cols=224 Identities=14% Similarity=0.157 Sum_probs=151.2
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
..|+++||++|++.+ ++.+.+.|.++||.|.++++||||..+-.--......|.+|+.+..+++.+.- ...|.++|.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g-y~eI~v~Gl 92 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG-YDEIAVVGL 92 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC-CCeEEEEee
Confidence 679999999998765 79999999999999999999999976421112223468899999999998542 356999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCC
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (433)
||||.++++++..+| ++++|.+|+|.........++. +... .++.+++....
T Consensus 93 SmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~-----~l~y--~~~~kk~e~k~----------------- 144 (243)
T COG1647 93 SMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEG-----LLEY--FRNAKKYEGKD----------------- 144 (243)
T ss_pred cchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHH-----HHHH--HHHhhhccCCC-----------------
Confidence 999999999998875 7899999999876432222211 1000 02222211111
Q ss_pred CHHHHHHhhhhccC-CCCCHHHHHhhC-CcccccCCCccceEEEeeCCCCcCCCCCCCh-hHHhcCCCeEEEEcCCCCee
Q 013936 315 SIRDFDNHATRVLG-KFETVDAYYRHS-SSANFVRNVSVPLLCISTLDDPVCTREAIPW-DECRANEKIILATTRHGGHL 391 (433)
Q Consensus 315 ~~~~~d~~~~~~~~-~~~~~~~y~~~~-s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~-~~~~~~~~~~l~~~~~gGH~ 391 (433)
..++++....-.. -..++.+++... .....+..|..|++++.|++|+++|.+.... .....+...++..+++.||.
T Consensus 145 -~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 145 -QEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred -HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 1111111100000 001112222211 1235678899999999999999999986654 33456778899999999999
Q ss_pred eeccCCcCCCCcHHHHHHHHHH
Q 013936 392 AFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 392 ~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
.-.+ .++.-+.+.|.+||+
T Consensus 224 It~D---~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLD---KERDQVEEDVITFLE 242 (243)
T ss_pred eecc---hhHHHHHHHHHHHhh
Confidence 8876 344468889999986
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.89 E-value=9e-23 Score=186.72 Aligned_cols=237 Identities=15% Similarity=0.125 Sum_probs=136.6
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
.+|+||++||++++ ... ++.+++.+. +||+|+++|+||||.|+..........+.+|+.++++. .+..+++++
T Consensus 12 ~~~~li~~hg~~~~-~~~-~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~----~~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLGTD-LRM-WDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH----LGIERAVFC 84 (251)
T ss_pred CCCeEEEEcCcccc-hhh-HHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCceEEE
Confidence 57899999998544 343 477888775 58999999999999986432221112233444444443 344679999
Q ss_pred EechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhh-hhhhhccCCHHHHh
Q 013936 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLH-QSTVARLADWEGIT 311 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 311 (433)
||||||++++.++.++|+ +++++|+++++........+... . .......+........... ...+.. ...
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 155 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNAR-I-AAVRAEGLAALADAVLERWFTPGFRE-AHP---- 155 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHH-H-hhhhhccHHHHHHHHHHHHccccccc-CCh----
Confidence 999999999999999887 79999988765432211111100 0 0000000000000000000 000000 000
Q ss_pred cCCCHHHHHHhhh-hccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCe
Q 013936 312 KSRSIRDFDNHAT-RVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGH 390 (433)
Q Consensus 312 ~~~~~~~~d~~~~-~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH 390 (433)
.....+..... ....++......+........+.++++|+++++|++|+++|.+.... ..+..++.++++++++||
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH 232 (251)
T TIGR02427 156 --ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVRE-IADLVPGARFAEIRGAGH 232 (251)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHH-HHHhCCCceEEEECCCCC
Confidence 00001111110 00011111122222233345677899999999999999999875443 556678899999999999
Q ss_pred eeeccCCcCCCCcHHHHHHHHH
Q 013936 391 LAFYEGITAKSLWWVRAVNVFL 412 (433)
Q Consensus 391 ~~~~e~~~~~~~w~~~~v~~Fl 412 (433)
+.+++. + ..+.+.+.+|+
T Consensus 233 ~~~~~~--p--~~~~~~i~~fl 250 (251)
T TIGR02427 233 IPCVEQ--P--EAFNAALRDFL 250 (251)
T ss_pred cccccC--h--HHHHHHHHHHh
Confidence 999873 2 34778888886
No 26
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.89 E-value=2.1e-22 Score=185.51 Aligned_cols=238 Identities=19% Similarity=0.177 Sum_probs=137.4
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCccc-CCChHHHHHHHHHHHHhCCCCcEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLY 230 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~ 230 (433)
+++|+||++||+++++ .++..++..+. +||+|+++|+||+|.|....+..+. ..+.+|+.++++++ ...+++
T Consensus 11 ~~~~~iv~lhG~~~~~--~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG--SYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcch--hHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEE
Confidence 4578999999997653 34567777775 4799999999999999754332222 23334555555443 345799
Q ss_pred EEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHH
Q 013936 231 AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGI 310 (433)
Q Consensus 231 lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 310 (433)
++||||||.+++.+++++++ .++++|++++............... ....... ....+... ...+.....+ +
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-~~~~~~~~~~--~ 154 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVR-IALLQHA---GPEAYVHA-QALFLYPADW--I 154 (257)
T ss_pred EEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHH-HHHHhcc---Ccchhhhh-hhhhhccccH--h
Confidence 99999999999999999887 7999998886443311111000000 0000000 00000000 0000000000 0
Q ss_pred hcC-CCHHHHHHhhhhccCCCCCHH------HHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEE
Q 013936 311 TKS-RSIRDFDNHATRVLGKFETVD------AYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILA 383 (433)
Q Consensus 311 ~~~-~~~~~~d~~~~~~~~~~~~~~------~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~ 383 (433)
... ....+.+. .....+.... ......+....+.++++|+++++|++|+++|.+.... ..+..++++++
T Consensus 155 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~ 230 (257)
T TIGR03611 155 SENAARLAADEA---HALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLR-LAAALPNAQLK 230 (257)
T ss_pred hccchhhhhhhh---hcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHH-HHHhcCCceEE
Confidence 000 00000000 0000011111 1111223345678899999999999999999876543 55667899999
Q ss_pred EcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 384 TTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 384 ~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
.++++||..+++. +..+.+.+.+||+
T Consensus 231 ~~~~~gH~~~~~~----~~~~~~~i~~fl~ 256 (257)
T TIGR03611 231 LLPYGGHASNVTD----PETFNRALLDFLK 256 (257)
T ss_pred EECCCCCCccccC----HHHHHHHHHHHhc
Confidence 9999999988873 2357888888885
No 27
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.89 E-value=9.2e-22 Score=184.92 Aligned_cols=264 Identities=11% Similarity=0.044 Sum_probs=145.1
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
.+++...+++ +|.++.+... +.+|+|||+||++.++ ..|+.++..|.+ +|+|+++|+
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~-------------------G~~~~iv~lHG~~~~~--~~~~~~~~~l~~-~~~vi~~D~ 68 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDE-------------------GTGPPILLCHGNPTWS--FLYRDIIVALRD-RFRCVAPDY 68 (286)
T ss_pred ccccceEEEc-CCcEEEEEEC-------------------CCCCEEEEECCCCccH--HHHHHHHHHHhC-CcEEEEECC
Confidence 3456666776 5666654421 1347899999996432 334778888865 699999999
Q ss_pred CCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH--
Q 013936 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC-- 269 (433)
Q Consensus 192 rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~-- 269 (433)
||+|.|+.+....+ ..+|..+.+..+.++.+..+++++||||||.+++.++..+|+ +++++|+++++......
T Consensus 69 ~G~G~S~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~ 143 (286)
T PRK03204 69 LGFGLSERPSGFGY---QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLA 143 (286)
T ss_pred CCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh--heeEEEEECccccCCCchh
Confidence 99999875432212 235666666665565566789999999999999999999988 79999988764311100
Q ss_pred HHHHhhhhhHH-HHHHHHHHH--HHHHHHhhhhhhhccCCHHHH---hcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcc
Q 013936 270 DRFINRRLVQK-CYDRVIAIG--LRGFAQLHQSTVARLADWEGI---TKSRSIRDFDNHATRVLGKFETVDAYYRHSSSA 343 (433)
Q Consensus 270 ~~~~~~~~~~~-~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~ 343 (433)
........... .....+... ..+.... ......+.+.. .......+...........+......... ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 218 (286)
T PRK03204 144 MKAFSRVMSSPPVQYAILRRNFFVERLIPA---GTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR--LA 218 (286)
T ss_pred HHHHHHHhccccchhhhhhhhHHHHHhccc---cccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH--hh
Confidence 00000000000 000000000 0000000 00000000000 00000000000000000000000000000 00
Q ss_pred cccCC--CccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHH
Q 013936 344 NFVRN--VSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFL 412 (433)
Q Consensus 344 ~~l~~--i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl 412 (433)
..+.+ +++|+|+|+|++|.++++........+..|+.++++++++||+.+.|. ++ .+++.+.+||
T Consensus 219 ~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~--Pe--~~~~~i~~~~ 285 (286)
T PRK03204 219 REVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDA--PD--RIAAAIIERF 285 (286)
T ss_pred hhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccC--HH--HHHHHHHHhc
Confidence 11111 389999999999999876543334667889999999999999999983 33 4888888886
No 28
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=5.1e-23 Score=190.41 Aligned_cols=240 Identities=14% Similarity=0.094 Sum_probs=138.9
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCccc-CCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~-~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
.|||+||++++. . .|+.++..|.++||+|+++|+||||.|+......+. ..+.+|+.++++.+. ...+++++||
T Consensus 5 ~vvllHG~~~~~-~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHGA-W-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGH 79 (255)
T ss_pred EEEEECCCCCCc-C-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEec
Confidence 389999997543 3 357888999888999999999999999754322222 233455666665432 1247999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH---HHHHHhhh-hhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHH-
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLI---CDRFINRR-LVQKCYDRVIAIGLRGFAQLHQSTVARLADWEG- 309 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~---~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~- 309 (433)
||||.+++.++.++|+ +|+++|++++...... ........ .....+...+.... .............
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 151 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGP------DKPPTGIMMKPEFV 151 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCC------CCCcchhhcCHHHH
Confidence 9999999999999988 7999999987421100 00000000 00000000000000 0000000000000
Q ss_pred ---HhcCCCHHHHHHhhhh-ccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEc
Q 013936 310 ---ITKSRSIRDFDNHATR-VLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATT 385 (433)
Q Consensus 310 ---~~~~~~~~~~d~~~~~-~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~ 385 (433)
........+....... ........... ......+.++++|+++|+|++|.++|++.... ..+..++++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~-~~~~~~~a~~~~i 227 (255)
T PLN02965 152 RHYYYNQSPLEDYTLSSKLLRPAPVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDV-MVENWPPAQTYVL 227 (255)
T ss_pred HHHHhcCCCHHHHHHHHHhcCCCCCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHHH-HHHhCCcceEEEe
Confidence 0000011000000000 00001111111 01122456799999999999999999875544 6778899999999
Q ss_pred CCCCeeeeccCCcCCCCcHHHHHHHHHHHhc
Q 013936 386 RHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (433)
Q Consensus 386 ~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~ 416 (433)
+++||+.++|. ++ -+.+.+.+|++.+.
T Consensus 228 ~~~GH~~~~e~--p~--~v~~~l~~~~~~~~ 254 (255)
T PLN02965 228 EDSDHSAFFSV--PT--TLFQYLLQAVSSLQ 254 (255)
T ss_pred cCCCCchhhcC--HH--HHHHHHHHHHHHhc
Confidence 99999999984 34 48899999988764
No 29
>PRK06489 hypothetical protein; Provisional
Probab=99.89 E-value=3.8e-22 Score=193.71 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=136.0
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHH-------HhCCceEEEEeCCCCCCCCCCCCCc---ccCCChHHHH-HHHHHHHH
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKM-------AGHGWNVVVSNHRGLGGISLTSDCF---YNGGWTEDLR-RVIDYLHC 222 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l-------~~~G~~vv~~d~rG~G~s~~~~~~~---~~~~~~~Dl~-~~i~~l~~ 222 (433)
.|+|||+||+++++..++...+.+.+ ..++|+|+++|+||||.|+...... ......+|.. ++++.+.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 57899999997754332212344443 2467999999999999987543211 0011124443 33444545
Q ss_pred hCCCCcEE-EEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHH----------HHHHH
Q 013936 223 QYPEVPLY-AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVI----------AIGLR 291 (433)
Q Consensus 223 ~~~~~~i~-lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~ 291 (433)
+.+..+++ ++||||||++++.++.++|+ +|+++|++++........................ ...+.
T Consensus 149 ~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T PRK06489 149 GLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLK 226 (360)
T ss_pred hcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence 44445664 89999999999999999998 8999999976421111000000000000000000 00000
Q ss_pred HHHHhhhhhhhccCCHHHHhcCCC---HH-HHHHhhhhccCCCCCHHHHHh------hCCcccccCCCccceEEEeeCCC
Q 013936 292 GFAQLHQSTVARLADWEGITKSRS---IR-DFDNHATRVLGKFETVDAYYR------HSSSANFVRNVSVPLLCISTLDD 361 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~d~~~~~~~~~~~~~~~y~~------~~s~~~~l~~i~~P~Lii~g~dD 361 (433)
........ ............... .. .++........ .....+.. ..+....+.+|++|+|+|+|++|
T Consensus 227 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D 303 (360)
T PRK06489 227 RANPMFAI-ATSGGTLAYQAQAPTRAAADKLVDERLAAPVT--ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADD 303 (360)
T ss_pred HHHHHHHH-HHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh--cCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCC
Confidence 00000000 000000000000000 00 00111100000 01111111 11234567899999999999999
Q ss_pred CcCCCCCCC-hhHHhcCCCeEEEEcCCC----CeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 362 PVCTREAIP-WDECRANEKIILATTRHG----GHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 362 ~ivp~~~~~-~~~~~~~~~~~l~~~~~g----GH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
+++|.+... ....+..|+.++++++++ ||+.+ |. ++ .+++.|.+||+.+.+
T Consensus 304 ~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~--P~--~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 304 ERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GS--AK--FWKAYLAEFLAQVPK 359 (360)
T ss_pred cccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cC--HH--HHHHHHHHHHHhccc
Confidence 999987541 235678899999999985 99886 52 44 489999999987653
No 30
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.89 E-value=1.6e-22 Score=186.88 Aligned_cols=238 Identities=15% Similarity=0.086 Sum_probs=140.6
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEE
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLY 230 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 230 (433)
+.++|+||++||+.+++ .. +..++..|.+ +|+|+++|+||||.|..... .....+.+|+.++++++ ...+++
T Consensus 13 ~~~~~~iv~lhG~~~~~-~~-~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~ 84 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSL-DN-LGVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKAT 84 (255)
T ss_pred CCCCCCEEEECCCCCch-hH-HHHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceE
Confidence 35678899999997654 33 4778888865 69999999999999875322 22234556777777665 345799
Q ss_pred EEEechhHHHHHHHHhhcCCCCCceEEEEEcCC-CChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHH
Q 013936 231 AVGTSIGANILVKYLGENGVNTPLVGAAAICSP-WDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEG 309 (433)
Q Consensus 231 lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 309 (433)
++||||||.+++.++.++++ +|+++|+++++ ....... . .... .............. ......+.......
T Consensus 85 lvGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~~-~--~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~- 156 (255)
T PRK10673 85 FIGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVRR-H--DEIF-AAINAVSEAGATTR-QQAAAIMRQHLNEE- 156 (255)
T ss_pred EEEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccchh-h--HHHH-HHHHHhhhcccccH-HHHHHHHHHhcCCH-
Confidence 99999999999999999988 79999998643 2221000 0 0000 00000000000000 00000000000000
Q ss_pred HhcCCCHHHHHH-hhhhccC--CCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcC
Q 013936 310 ITKSRSIRDFDN-HATRVLG--KFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (433)
Q Consensus 310 ~~~~~~~~~~d~-~~~~~~~--~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~ 386 (433)
....+.. .+..... ........+........+.++++|+|+|+|++|+.++.+.... ..+..+++++++++
T Consensus 157 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~ 230 (255)
T PRK10673 157 -----GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDD-LLAQFPQARAHVIA 230 (255)
T ss_pred -----HHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHH-HHHhCCCcEEEEeC
Confidence 0000000 0000000 0001112222233334567889999999999999998765544 56778999999999
Q ss_pred CCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 387 HGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 387 ~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
++||+.++|. +..+.+.+.+||+.
T Consensus 231 ~~gH~~~~~~----p~~~~~~l~~fl~~ 254 (255)
T PRK10673 231 GAGHWVHAEK----PDAVLRAIRRYLND 254 (255)
T ss_pred CCCCeeeccC----HHHHHHHHHHHHhc
Confidence 9999988873 33588889999864
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.89 E-value=1.8e-21 Score=182.21 Aligned_cols=247 Identities=15% Similarity=0.149 Sum_probs=134.2
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
.+|+||++||+.|++. .++..+...+.++||+|+++|+||+|.|+....... ....++..+.+..+.+.....+++++
T Consensus 24 ~~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li 101 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE-LWTIDYFVDELEEVREKLGLDKFYLL 101 (288)
T ss_pred CCCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc-cccHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3577999999877654 455777777776799999999999999875422110 01123343334444444445679999
Q ss_pred EechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh-------hhhhhhccC
Q 013936 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQL-------HQSTVARLA 305 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~ 305 (433)
||||||.+++.++.++|+ ++.++|++++............+. . ..+.......+...... .........
T Consensus 102 G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
T TIGR01250 102 GHSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKELNRL-R-KELPPEVRAAIKRCEASGDYDNPEYQEAVEVFY 177 (288)
T ss_pred EeehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHHHHH-H-hhcChhHHHHHHHHHhccCcchHHHHHHHHHHH
Confidence 999999999999999988 799999887644332211111100 0 00000000000000000 000000000
Q ss_pred CHHHHhcCC----CHHHHHHhhh----hccCC---CCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHH
Q 013936 306 DWEGITKSR----SIRDFDNHAT----RVLGK---FETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDEC 374 (433)
Q Consensus 306 ~~~~~~~~~----~~~~~d~~~~----~~~~~---~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~ 374 (433)
. ....... ....+..... ....+ +. ....+........+.++++|+++++|++|++ +++... ...
T Consensus 178 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~-~~~ 253 (288)
T TIGR01250 178 H-HLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFT-ITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAR-EMQ 253 (288)
T ss_pred H-HhhcccccchHHHHHHhhccCHHHHhcccCCcccc-ccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHH-HHH
Confidence 0 0000000 0000000000 00000 00 0001111122345678999999999999985 444433 355
Q ss_pred hcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 375 RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 375 ~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
...++.++++++++||+.++|. + ..+.+.|.+|++
T Consensus 254 ~~~~~~~~~~~~~~gH~~~~e~--p--~~~~~~i~~fl~ 288 (288)
T TIGR01250 254 ELIAGSRLVVFPDGSHMTMIED--P--EVYFKLLSDFIR 288 (288)
T ss_pred HhccCCeEEEeCCCCCCcccCC--H--HHHHHHHHHHhC
Confidence 6678899999999999999983 3 358888888874
No 32
>PLN02578 hydrolase
Probab=99.89 E-value=5.5e-22 Score=192.07 Aligned_cols=243 Identities=16% Similarity=0.135 Sum_probs=137.2
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
+|.||++||+++++ ..|+.++..|.+ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 86 g~~vvliHG~~~~~--~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG 158 (354)
T PLN02578 86 GLPIVLIHGFGASA--FHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVG 158 (354)
T ss_pred CCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEE
Confidence 36689999996643 334677788865 699999999999998764322222233456666665553 45799999
Q ss_pred echhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHH-----------HHhhhhh---HHHHHHHHHHHHHHHHHhhhh
Q 013936 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR-----------FINRRLV---QKCYDRVIAIGLRGFAQLHQS 299 (433)
Q Consensus 234 ~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~-----------~~~~~~~---~~~~~~~~~~~l~~~~~~~~~ 299 (433)
|||||.+++.+|.++|+ +++++|+++++........ ....... ...+.+.....+.. ......
T Consensus 159 ~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 235 (354)
T PLN02578 159 NSLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW-QAKQPS 235 (354)
T ss_pred ECHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH-HhcCHH
Confidence 99999999999999998 7999999876432211000 0000000 00000000000000 000000
Q ss_pred hhhccCCHHHHhcCCCHHH-HHHhhhhccCCCCCHHHHHh----------hCCcccccCCCccceEEEeeCCCCcCCCCC
Q 013936 300 TVARLADWEGITKSRSIRD-FDNHATRVLGKFETVDAYYR----------HSSSANFVRNVSVPLLCISTLDDPVCTREA 368 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~y~~----------~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~ 368 (433)
...... ...........+ +.+..............+++ .....+.++++++|+++|+|++|+++|.+.
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 236 RIESVL-KSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHH-HHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 000000 000000000001 11111111111111122211 111234578899999999999999998876
Q ss_pred CChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 369 IPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 369 ~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
... ..+..|+.+++++ ++||+.+.|. + ..+.+.|.+|++
T Consensus 315 ~~~-l~~~~p~a~l~~i-~~GH~~~~e~--p--~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AEK-IKAFYPDTTLVNL-QAGHCPHDEV--P--EQVNKALLEWLS 353 (354)
T ss_pred HHH-HHHhCCCCEEEEe-CCCCCccccC--H--HHHHHHHHHHHh
Confidence 544 5666789999988 5899999883 3 358899999986
No 33
>PRK07581 hypothetical protein; Validated
Probab=99.89 E-value=8.6e-22 Score=189.92 Aligned_cols=255 Identities=16% Similarity=0.104 Sum_probs=141.7
Q ss_pred CCcEEEEECCCCCCChhHHHHHHH---HHHHhCCceEEEEeCCCCCCCCCCCCC--cccC------CChHHHHHHHHHHH
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLA---FKMAGHGWNVVVSNHRGLGGISLTSDC--FYNG------GWTEDLRRVIDYLH 221 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~---~~l~~~G~~vv~~d~rG~G~s~~~~~~--~~~~------~~~~Dl~~~i~~l~ 221 (433)
..|+||++||+++++.. +..++ ..+..++|+|+++|+||||.|+.+... .++. ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD--NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc--chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 44677888877654332 23332 356556899999999999998754321 1221 13577777665565
Q ss_pred HhCCCCc-EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHH----------HHHHHHH
Q 013936 222 CQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYD----------RVIAIGL 290 (433)
Q Consensus 222 ~~~~~~~-i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~l 290 (433)
+.....+ .++|||||||++++.++.++|+ +|+++|++++............+.....+.. ......+
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 195 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGL 195 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHH
Confidence 5555667 4799999999999999999998 8999999976543211111100000000000 0000000
Q ss_pred HHHHHhh-----hhhhhccCCHHHHhcCCCHHHH-HHhhhhcc--CCCCCHHHH----Hh-----h----CCcccccCCC
Q 013936 291 RGFAQLH-----QSTVARLADWEGITKSRSIRDF-DNHATRVL--GKFETVDAY----YR-----H----SSSANFVRNV 349 (433)
Q Consensus 291 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~--~~~~~~~~y----~~-----~----~s~~~~l~~i 349 (433)
....... ...+.+....... ......+. ........ ......... .+ . ......+++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 196 RAHARVYAGWGFSQAFYRQELWRAM-GYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHHhHHHHHHhhhcccc-ChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 0000000 0000000000000 00000000 00000000 000111111 00 0 0123567889
Q ss_pred ccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCC-CCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 350 SVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH-GGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~-gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
++|+|+|+|++|.++|++.... ..+..|+++++++++ +||+.++|. +..+.+.|.+|++++..
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~-l~~~ip~a~l~~i~~~~GH~~~~~~----~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEA-EAALIPNAELRPIESIWGHLAGFGQ----NPADIAFIDAALKELLA 338 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEeCCCCCccccccC----cHHHHHHHHHHHHHHHh
Confidence 9999999999999999876544 566779999999998 899999983 23588999999998764
No 34
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.89 E-value=3.8e-22 Score=181.36 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=156.3
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC-Cccc-CCChHHHHHHHHHHHHhCCCCc
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSD-CFYN-GGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~-~~~~-~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
.+..|+|+++||++-...+ |+.....|+.+||+|+++|+||+|.|+.+.. ..|+ ...+.|+..+++++. .++
T Consensus 41 ~~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k 114 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKK 114 (322)
T ss_pred CCCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cce
Confidence 5678999999999865433 5788899999999999999999999987654 2333 234467777777775 568
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH---HHHHHHhhh-----h--------hHHHHHHHHHHHHHH
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL---ICDRFINRR-----L--------VQKCYDRVIAIGLRG 292 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~---~~~~~~~~~-----~--------~~~~~~~~~~~~l~~ 292 (433)
++++||+|||++++.++..+|+ ++++.|+++.+.... ....+.... . ....+.+...+.+..
T Consensus 115 ~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~ 192 (322)
T KOG4178|consen 115 AFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVK 192 (322)
T ss_pred eEEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHH
Confidence 9999999999999999999999 899999999876611 111010000 0 000011111111111
Q ss_pred HHHhhhhhhhccCC----HH-HHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCC-----cccccCCCccceEEEeeCCCC
Q 013936 293 FAQLHQSTVARLAD----WE-GITKSRSIRDFDNHATRVLGKFETVDAYYRHSS-----SANFVRNVSVPLLCISTLDDP 362 (433)
Q Consensus 293 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s-----~~~~l~~i~~P~Lii~g~dD~ 362 (433)
.............. .. .-.....++-++..+ ...++..-.+||++.. ....+.+|++|+++|+|..|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~ 270 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDP 270 (322)
T ss_pred hhhccccCCccccCCCCCCccchhhHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEecCcc
Confidence 11100000000000 00 000001111112222 2234555556666432 245678899999999999999
Q ss_pred cCCCCCCChhHHhcCCCe-EEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhc
Q 013936 363 VCTREAIPWDECRANEKI-ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (433)
Q Consensus 363 ivp~~~~~~~~~~~~~~~-~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~ 416 (433)
+.+.........+..|+. +.++++++||+...|. ++ -+++.+.+|+++..
T Consensus 271 v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~--p~--~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 271 VLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEK--PQ--EVNQAILGFINSFS 321 (322)
T ss_pred cccchhHHHHHHHhhccccceEEecCCcccccccC--HH--HHHHHHHHHHHhhc
Confidence 998763223344555665 7889999999988873 33 48999999998754
No 35
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.89 E-value=2.8e-22 Score=183.76 Aligned_cols=231 Identities=16% Similarity=0.145 Sum_probs=128.6
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
+|+|||+||+++++ .. |+.++..+ + +|+|+++|+||+|.|+..... ....+.+|+.++++ ..+..+++++|
T Consensus 2 ~p~vvllHG~~~~~-~~-w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~----~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QD-WQPVGEAL-P-DYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQ----SYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCCCh-HH-HHHHHHHc-C-CCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHH----HcCCCCeEEEE
Confidence 47799999997655 33 47888877 3 699999999999998754321 11122334444443 33467899999
Q ss_pred echhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHH-HHHHHHHhh--hhhhhccCCHHHH
Q 013936 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAI-GLRGFAQLH--QSTVARLADWEGI 310 (433)
Q Consensus 234 ~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~--~~~~~~~~~~~~~ 310 (433)
|||||.+++.++.++++. +++++++++++...........+......+...+.. .+....... ...+.... ..
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 148 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLN-AE-- 148 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccC-cc--
Confidence 999999999999998652 499999887664332211110000000000000000 000000000 00000000 00
Q ss_pred hcCCCHHHHHHhhhhccCCCCCHHHHHhh------CCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEE
Q 013936 311 TKSRSIRDFDNHATRVLGKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILAT 384 (433)
Q Consensus 311 ~~~~~~~~~d~~~~~~~~~~~~~~~y~~~------~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~ 384 (433)
....+...... ..+ .....++.. ......+.++++|+++|+|++|+.+. . ... ..++++++
T Consensus 149 ----~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~-~~~-~~~~~~~~ 215 (242)
T PRK11126 149 ----QRQQLVAKRSN-NNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----A-LAQ-QLALPLHV 215 (242)
T ss_pred ----HHHHHHHhccc-CCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----H-HHH-HhcCeEEE
Confidence 00000000000 000 011111111 11224677899999999999998652 1 222 24899999
Q ss_pred cCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 385 TRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 385 ~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
++++||+.++|. +..+.+.|.+|++.
T Consensus 216 i~~~gH~~~~e~----p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHREN----PAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhhC----hHHHHHHHHHHHhh
Confidence 999999999983 33588999999875
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.88 E-value=1.9e-22 Score=184.20 Aligned_cols=240 Identities=16% Similarity=0.181 Sum_probs=136.8
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
+|+||++||+++++ .. ++.++..|. +||+|+++|+||+|.|+.... .....+.+.+.+++..+.+..+..+++++|
T Consensus 1 ~~~vv~~hG~~~~~-~~-~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSG-AD-WQALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCch-hh-HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 36799999997654 33 478999997 799999999999999865321 111222223333355666666677899999
Q ss_pred echhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHH-HHHHHHHhhhh--hhhcc--CCHH
Q 013936 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAI-GLRGFAQLHQS--TVARL--ADWE 308 (433)
Q Consensus 234 ~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~--~~~~~--~~~~ 308 (433)
|||||.+++.++.++|+ .+.+++++++............+......+...+.. ....+...... .+... .+..
T Consensus 77 ~S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 77 YSMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred eccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 99999999999999988 799999988754432211111000000000000100 00111100000 00000 0000
Q ss_pred HHhcCCCHHHHHHhhhhccCCCCCHHHHHhh------CCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEE
Q 013936 309 GITKSRSIRDFDNHATRVLGKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIIL 382 (433)
Q Consensus 309 ~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~------~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l 382 (433)
. ...+..... .........++.. ......+.++++|+++++|++|+.++ +.. ....+..++.++
T Consensus 155 ~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~-~~~~~~~~~~~~ 224 (251)
T TIGR03695 155 Q------RQALRAKRL--ANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIA-KEMQKLLPNLTL 224 (251)
T ss_pred H------hHHHHHhcc--cccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHH-HHHHhcCCCCcE
Confidence 0 000000000 0000111111111 11224567899999999999998764 222 235567789999
Q ss_pred EEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 383 ATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 383 ~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
++++++||+.++|. ++ -+.+.+.+|++
T Consensus 225 ~~~~~~gH~~~~e~--~~--~~~~~i~~~l~ 251 (251)
T TIGR03695 225 VIIANAGHNIHLEN--PE--AFAKILLAFLE 251 (251)
T ss_pred EEEcCCCCCcCccC--hH--HHHHHHHHHhC
Confidence 99999999999984 33 37788888873
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.88 E-value=4.9e-21 Score=181.88 Aligned_cols=268 Identities=13% Similarity=0.105 Sum_probs=147.0
Q ss_pred ceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCC
Q 013936 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 115 ~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~ 194 (433)
....+...||..+.+.-.. +++.+.||++||+.+++... .+...+..++|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g-----------------~~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~ 64 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSG-----------------NPDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRGC 64 (306)
T ss_pred cCCeEEcCCCcEEEEEECc-----------------CCCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCCC
Confidence 4567888899888764321 22345689999987654331 233445456899999999999
Q ss_pred CCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHh
Q 013936 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFIN 274 (433)
Q Consensus 195 G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~ 274 (433)
|.|+.... ......+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ +++++|++++.........+..
T Consensus 65 G~S~~~~~--~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~ 140 (306)
T TIGR01249 65 GKSTPHAC--LEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFLLREKEWSWFY 140 (306)
T ss_pred CCCCCCCC--cccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeeccccCCHHHHHHHH
Confidence 99974321 1112335555555556555556689999999999999999999988 7999999876543221111100
Q ss_pred h----hhhHHHHHHHHHH---HH--HHHHHhhhhhhhccCCHHHH-hcCCCHHHHHH-hhhhc-cCCCC-----------
Q 013936 275 R----RLVQKCYDRVIAI---GL--RGFAQLHQSTVARLADWEGI-TKSRSIRDFDN-HATRV-LGKFE----------- 331 (433)
Q Consensus 275 ~----~~~~~~~~~~~~~---~l--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~-~~~~~-~~~~~----------- 331 (433)
. ......+...+.. .. ..+.......+.. ...+.. ........+.. ..... ..++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (306)
T TIGR01249 141 EGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQS-GDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAF 219 (306)
T ss_pred hcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccC-CCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHH
Confidence 0 0000111111100 00 0111100000000 000000 00000001110 00000 00000
Q ss_pred -CHHHHH-------h-hCCcccccCCC-ccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCC
Q 013936 332 -TVDAYY-------R-HSSSANFVRNV-SVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKS 401 (433)
Q Consensus 332 -~~~~y~-------~-~~s~~~~l~~i-~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~ 401 (433)
.....| . .......+.++ ++|+|+|+|++|+++|.+.... ..+..++.++++++++||+.+.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~----- 293 (306)
T TIGR01249 220 ARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWA-LHKAFPEAELKVTNNAGHSAFDPN----- 293 (306)
T ss_pred HHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHH-HHHhCCCCEEEEECCCCCCCCChH-----
Confidence 000000 0 00012355677 6999999999999999876544 566778999999999999986542
Q ss_pred CcHHHHHHHHHHHh
Q 013936 402 LWWVRAVNVFLDAL 415 (433)
Q Consensus 402 ~w~~~~v~~Fl~~~ 415 (433)
..+.|.+|+..+
T Consensus 294 --~~~~i~~~~~~~ 305 (306)
T TIGR01249 294 --NLAALVHALETY 305 (306)
T ss_pred --HHHHHHHHHHHh
Confidence 457777877654
No 38
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=7.5e-21 Score=173.29 Aligned_cols=302 Identities=14% Similarity=0.128 Sum_probs=165.3
Q ss_pred CCCCCCCCccc--HHHHhhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC
Q 013936 87 YLPTPWLSSPH--LQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT 164 (433)
Q Consensus 87 y~p~~~~~~~~--lqt~~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~ 164 (433)
+.|+.|+...+ ++++-...+. .-.++|..+.+..+++..+-.--..+ ...+++.+|++||++
T Consensus 37 ~~~~~w~~~~~~~l~~~e~ril~-~~~v~~~~~~v~i~~~~~iw~~~~~~---------------~~~~~~plVliHGyG 100 (365)
T KOG4409|consen 37 WLPTLWCSTSRDQLKEAEKRILS-SVPVPYSKKYVRIPNGIEIWTITVSN---------------ESANKTPLVLIHGYG 100 (365)
T ss_pred cCCcccccchHHHHHHHHHhhhh-hcCCCcceeeeecCCCceeEEEeecc---------------cccCCCcEEEEeccc
Confidence 45556876544 6665444433 23578888888888766552221111 224556689999997
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHH
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKY 244 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~ 244 (433)
++. ..|++ -.+.|++ .++|+++|++|+|+|+.+.-..-.....+...+.++..+....-.+++++||||||.++..|
T Consensus 101 Ag~-g~f~~-Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~Y 177 (365)
T KOG4409|consen 101 AGL-GLFFR-NFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKY 177 (365)
T ss_pred hhH-HHHHH-hhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHH
Confidence 654 44434 4556666 79999999999999976432222223334566666666777777899999999999999999
Q ss_pred HhhcCCCCCceEEEEEcCCCChHHH--HHHHhhhhhHHHHHHHHHHH--------HHHHHHhhhhhhhccCCHHHHhcCC
Q 013936 245 LGENGVNTPLVGAAAICSPWDLLIC--DRFINRRLVQKCYDRVIAIG--------LRGFAQLHQSTVARLADWEGITKSR 314 (433)
Q Consensus 245 a~~~~~~~~v~~~v~i~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (433)
|.++|+ +|+.+|+++|.--.... .....+.. ...+ +.+..- +.+.+....+.+......+...+..
T Consensus 178 AlKyPe--rV~kLiLvsP~Gf~~~~~~~~~~~~~~-~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~ 253 (365)
T KOG4409|consen 178 ALKYPE--RVEKLILVSPWGFPEKPDSEPEFTKPP-PEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFP 253 (365)
T ss_pred HHhChH--hhceEEEecccccccCCCcchhhcCCC-hHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhcc
Confidence 999999 79999998763222111 00000000 0111 100000 0000000000000000001111110
Q ss_pred --CHHHH-HHhhhhccCCCCCHHHHHh---------hCCcccccCCCc--cceEEEeeCCCCcCCCCCCChhHHhcCCCe
Q 013936 315 --SIRDF-DNHATRVLGKFETVDAYYR---------HSSSANFVRNVS--VPLLCISTLDDPVCTREAIPWDECRANEKI 380 (433)
Q Consensus 315 --~~~~~-d~~~~~~~~~~~~~~~y~~---------~~s~~~~l~~i~--~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~ 380 (433)
...++ -+.+-.....-.+-+.-+. +....+.+..++ ||+++|+|++|-+--..............+
T Consensus 254 ~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~ 333 (365)
T KOG4409|consen 254 SLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYV 333 (365)
T ss_pred ccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccc
Confidence 01111 1111000000011111111 111223445555 999999999997644333222222256679
Q ss_pred EEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 381 ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 381 ~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
+.++++++||..|.++ ++ -+++.|.++++..
T Consensus 334 ~~~~v~~aGHhvylDn--p~--~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 334 EIIIVPGAGHHVYLDN--PE--FFNQIVLEECDKV 364 (365)
T ss_pred eEEEecCCCceeecCC--HH--HHHHHHHHHHhcc
Confidence 9999999999999984 34 4889999988753
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.88 E-value=7.4e-22 Score=177.60 Aligned_cols=219 Identities=19% Similarity=0.200 Sum_probs=126.7
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEech
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSI 236 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~ 236 (433)
|||+||+++++ . ++..+++.|. +||+|+++|+||+|.|+.... .....+.+++.++.+.+ ++....+++++|||+
T Consensus 1 vv~~hG~~~~~-~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l-~~~~~~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSS-E-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELL-DALGIKKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTG-G-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHH-HHTTTSSEEEEEETH
T ss_pred eEEECCCCCCH-H-HHHHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcc-ccccccccccccccc
Confidence 79999997654 3 3478999884 799999999999999876442 11122222233333333 333346899999999
Q ss_pred hHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHH--HHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCC
Q 013936 237 GANILVKYLGENGVNTPLVGAAAICSPWDLLICD--RFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (433)
Q Consensus 237 GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (433)
||.+++.++.++|+ +++++|+++++....... ... ......+...... .................+.......
T Consensus 76 Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (228)
T PF12697_consen 76 GGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSR-SLRRLASRFFYRWFDGDEPEDLIRS- 150 (228)
T ss_dssp HHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHTHHHHHHHHHH-
T ss_pred cccccccccccccc--ccccceeeccccccccccccccc-chhhhhhhhcccc-ccccccccccccccccccccccccc-
Confidence 99999999999988 799999999988764332 111 1111111111100 0000000000000000000000000
Q ss_pred CHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeec
Q 013936 315 SIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFY 394 (433)
Q Consensus 315 ~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~ 394 (433)
....+.+..... .........++++++|+++++|++|++++.+.... ..+..+++++++++++||+.++
T Consensus 151 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 151 SRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEE-LADKLPNAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHH-HHHHSTTEEEEEETTSSSTHHH
T ss_pred cccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHHHH-HHHHCCCCEEEEECCCCCccHH
Confidence 000000000000 01112235667889999999999999998554433 4556799999999999999998
Q ss_pred cC
Q 013936 395 EG 396 (433)
Q Consensus 395 e~ 396 (433)
|.
T Consensus 220 ~~ 221 (228)
T PF12697_consen 220 EQ 221 (228)
T ss_dssp HS
T ss_pred HC
Confidence 83
No 40
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=9.6e-21 Score=185.83 Aligned_cols=244 Identities=18% Similarity=0.139 Sum_probs=154.6
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
.+.++..+...||.++...++.|.. +++.|+||++||+.+. .+.++..++..++++||+|+++|+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~--------------~~~~P~Vli~gG~~~~-~~~~~~~~~~~La~~Gy~vl~~D~ 230 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG--------------DGPFPTVLVCGGLDSL-QTDYYRLFRDYLAPRGIAMLTIDM 230 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC--------------CCCccEEEEeCCcccc-hhhhHHHHHHHHHhCCCEEEEECC
Confidence 4567888888888889888876642 3467898888887543 334457788999999999999999
Q ss_pred CCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH
Q 013936 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (433)
Q Consensus 192 rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~ 269 (433)
||+|.|.... ..........++++++.... +..+|+++||||||++++.++..+++ +++++|+++++.+....
T Consensus 231 pG~G~s~~~~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~ 305 (414)
T PRK05077 231 PSVGFSSKWK---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLT 305 (414)
T ss_pred CCCCCCCCCC---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhc
Confidence 9999885421 11122233457788887652 34689999999999999999988887 79999999988653211
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCccccc-CC
Q 013936 270 DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFV-RN 348 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l-~~ 348 (433)
....... ....+...+... . .. ...+.+ .+...+ ..+.. . ....+ .+
T Consensus 306 ~~~~~~~-~p~~~~~~la~~----l-----g~-~~~~~~---------~l~~~l----~~~sl-~-------~~~~l~~~ 353 (414)
T PRK05077 306 DPKRQQQ-VPEMYLDVLASR----L-----GM-HDASDE---------ALRVEL----NRYSL-K-------VQGLLGRR 353 (414)
T ss_pred chhhhhh-chHHHHHHHHHH----h-----CC-CCCChH---------HHHHHh----hhccc-h-------hhhhhccC
Confidence 1100000 000111111000 0 00 000111 111110 00100 0 00111 57
Q ss_pred CccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 349 VSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 349 i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
+++|+|+|+|++|+++|.+.... .....++.++++++++. .+++ ++ .+.+.+.+||+..
T Consensus 354 i~~PvLiI~G~~D~ivP~~~a~~-l~~~~~~~~l~~i~~~~---~~e~--~~--~~~~~i~~wL~~~ 412 (414)
T PRK05077 354 CPTPMLSGYWKNDPFSPEEDSRL-IASSSADGKLLEIPFKP---VYRN--FD--KALQEISDWLEDR 412 (414)
T ss_pred CCCcEEEEecCCCCCCCHHHHHH-HHHhCCCCeEEEccCCC---ccCC--HH--HHHHHHHHHHHHH
Confidence 99999999999999999887654 45678899999999762 3332 22 4778899998764
No 41
>PLN02872 triacylglycerol lipase
Probab=99.87 E-value=2e-21 Score=188.32 Aligned_cols=308 Identities=18% Similarity=0.172 Sum_probs=178.4
Q ss_pred CcccHHHHhhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHH--
Q 013936 94 SSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAY-- 171 (433)
Q Consensus 94 ~~~~lqt~~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y-- 171 (433)
...-+||++..++.+. ..+.+++.++++||..|.+++..+.... .....+|+|+++||+.+++..+.
T Consensus 25 ~~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~----------~~~~~~~~Vll~HGl~~ss~~w~~~ 93 (395)
T PLN02872 25 RRSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPR----------LGSQRGPPVLLQHGLFMAGDAWFLN 93 (395)
T ss_pred cCCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCC----------CCCCCCCeEEEeCcccccccceeec
Confidence 3446899998887654 6788999999999999999998543210 01234688999999976554321
Q ss_pred --HHHHHHHHHhCCceEEEEeCCCCCCCCC----C--CCCcccCCC----hHHHHHHHHHHHHhCCCCcEEEEEechhHH
Q 013936 172 --IKHLAFKMAGHGWNVVVSNHRGLGGISL----T--SDCFYNGGW----TEDLRRVIDYLHCQYPEVPLYAVGTSIGAN 239 (433)
Q Consensus 172 --~~~~~~~l~~~G~~vv~~d~rG~G~s~~----~--~~~~~~~~~----~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ 239 (433)
.+.++..|+++||+|+++|.||++.+.. . ...++...+ ..|+.++++++.+.. ..+++++||||||.
T Consensus 94 ~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~ 172 (395)
T PLN02872 94 SPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTI 172 (395)
T ss_pred CcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHH
Confidence 1456677889999999999999876532 1 111112222 269999999997654 36899999999999
Q ss_pred HHHHHHhhcCC-CCCceEEEEEcCCCChHHHHHHHhhhh----hHHH---------------HHHHHHHHHHHHHHhhhh
Q 013936 240 ILVKYLGENGV-NTPLVGAAAICSPWDLLICDRFINRRL----VQKC---------------YDRVIAIGLRGFAQLHQS 299 (433)
Q Consensus 240 ia~~~a~~~~~-~~~v~~~v~i~~p~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~l~~~~~~~~~ 299 (433)
+++.++ .+|+ ..+|++++++++..........+.... ...+ ... +...++........
T Consensus 173 ~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~C~~~~~c~~ 250 (395)
T PLN02872 173 MSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVK-LLDSICEGHMDCND 250 (395)
T ss_pred HHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHH-HHHHHccCchhHHH
Confidence 998655 4454 125788888876543211111000000 0000 000 00000000000000
Q ss_pred h---hhc---cCCHHH-------HhcCCCHHHHHHhh---hhc---cCCCCC--HHHHHhhC-CcccccCCC--ccceEE
Q 013936 300 T---VAR---LADWEG-------ITKSRSIRDFDNHA---TRV---LGKFET--VDAYYRHS-SSANFVRNV--SVPLLC 355 (433)
Q Consensus 300 ~---~~~---~~~~~~-------~~~~~~~~~~d~~~---~~~---~~~~~~--~~~y~~~~-s~~~~l~~i--~~P~Li 355 (433)
. +.. ..+... .....+.+...... ... .+.|.. -...|... .+.-.+.+| ++|+++
T Consensus 251 ~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i 330 (395)
T PLN02872 251 LLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWM 330 (395)
T ss_pred HHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEE
Confidence 0 000 001100 01123333332222 111 112221 12234433 344567888 589999
Q ss_pred EeeCCCCcCCCCCCChhHHhcCCC-eEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 356 ISTLDDPVCTREAIPWDECRANEK-IILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 356 i~g~dD~ivp~~~~~~~~~~~~~~-~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
++|++|.+++++.... ..+..++ .++..+++.||+.|+-+. ..+..+.+.|.+|+++...
T Consensus 331 ~~G~~D~lv~~~dv~~-l~~~Lp~~~~l~~l~~~gH~dfi~~~-eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 331 GYGGTDGLADVTDVEH-TLAELPSKPELLYLENYGHIDFLLST-SAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred EEcCCCCCCCHHHHHH-HHHHCCCccEEEEcCCCCCHHHHhCc-chHHHHHHHHHHHHHHhhh
Confidence 9999999998876655 3444444 688889999998765221 1233477999999986544
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=3.6e-20 Score=181.70 Aligned_cols=259 Identities=13% Similarity=0.084 Sum_probs=137.6
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCCh-HHHHH-HHHHHHHhCCCCcE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRR-VIDYLHCQYPEVPL 229 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~-~i~~l~~~~~~~~i 229 (433)
+.+|+||++||++++ ...| ...+..|.+ +|+|+++|+||+|.|+............ +++.+ +.+++ +.....++
T Consensus 103 ~~~p~vvllHG~~~~-~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~-~~l~~~~~ 178 (402)
T PLN02894 103 EDAPTLVMVHGYGAS-QGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR-KAKNLSNF 178 (402)
T ss_pred CCCCEEEEECCCCcc-hhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH-HHcCCCCe
Confidence 456899999999654 3444 456677765 5999999999999986532111111111 12222 22333 33345689
Q ss_pred EEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHH---HHhhh---hhHHHHHHH---------HHHHH----
Q 013936 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR---FINRR---LVQKCYDRV---------IAIGL---- 290 (433)
Q Consensus 230 ~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~---~~~~~---~~~~~~~~~---------~~~~l---- 290 (433)
+++||||||.+++.++.++|+ +++++|+++++........ ...+. +...+.... +....
T Consensus 179 ~lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~ 256 (402)
T PLN02894 179 ILLGHSFGGYVAAKYALKHPE--HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWG 256 (402)
T ss_pred EEEEECHHHHHHHHHHHhCch--hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchh
Confidence 999999999999999999988 7999998876432111110 01000 000000000 00000
Q ss_pred HHHHHhhh-hhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCH---HHH------HhhCCcccccCCCccceEEEeeCC
Q 013936 291 RGFAQLHQ-STVARLADWEGITKSRSIRDFDNHATRVLGKFETV---DAY------YRHSSSANFVRNVSVPLLCISTLD 360 (433)
Q Consensus 291 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~y------~~~~s~~~~l~~i~~P~Lii~g~d 360 (433)
........ ..+........+ .......+.+.+......-.+. ..+ .........+.+|++|+++|+|++
T Consensus 257 ~~l~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~ 335 (402)
T PLN02894 257 PNLVRRYTTARFGAHSTGDIL-SEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRH 335 (402)
T ss_pred HHHHHHHHHHHhhhccccccc-CcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCC
Confidence 00000000 000000000000 0000011111100000000000 000 111122346788999999999999
Q ss_pred CCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccCCccc
Q 013936 361 DPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTSPYVN 422 (433)
Q Consensus 361 D~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~~~~~ 422 (433)
|.+.+.. .........+++++++++++||+.+.|. ++ -+++.+.+|++.+.+.++.+
T Consensus 336 D~i~~~~-~~~~~~~~~~~~~~~~i~~aGH~~~~E~--P~--~f~~~l~~~~~~~~~~~~~~ 392 (402)
T PLN02894 336 DWMNYEG-AVEARKRMKVPCEIIRVPQGGHFVFLDN--PS--GFHSAVLYACRKYLSPDREE 392 (402)
T ss_pred CCCCcHH-HHHHHHHcCCCCcEEEeCCCCCeeeccC--HH--HHHHHHHHHHHHhccCCchh
Confidence 9876533 2222233345688999999999999984 34 48999999999988875543
No 43
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=2.7e-21 Score=182.96 Aligned_cols=283 Identities=17% Similarity=0.157 Sum_probs=160.1
Q ss_pred cceEEEEcCCCC-EEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeC
Q 013936 114 YKRHLFQTPDGG-TIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNH 191 (433)
Q Consensus 114 ~~r~~~~~~DG~-~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~ 191 (433)
.+...+..+.|. ++...|...... -..+.+..+|.||++||+++++ ..|+..+..+.++ |++|+++|.
T Consensus 25 ~~~~~i~~~~g~~~~~~~w~~~~~~--------~~~~~~~~~~pvlllHGF~~~~--~~w~~~~~~L~~~~~~~v~aiDl 94 (326)
T KOG1454|consen 25 LRSTSIEIPWGPLTIRSKWIPNLDK--------YGSPGDKDKPPVLLLHGFGASS--FSWRRVVPLLSKAKGLRVLAIDL 94 (326)
T ss_pred ccceEEEcccCCceeEEEEecccee--------ccCCCCCCCCcEEEeccccCCc--ccHhhhccccccccceEEEEEec
Confidence 344455666664 777778765421 0011224678899999997643 3357888888765 699999999
Q ss_pred CCCC-CCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEE---EEcCCCChH
Q 013936 192 RGLG-GISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA---AICSPWDLL 267 (433)
Q Consensus 192 rG~G-~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v---~i~~p~~~~ 267 (433)
+|+| .|+.+....|. ..+..+++..+...+...+++++||||||.++..+|+.+|+ .|++++ +++++....
T Consensus 95 ~G~g~~s~~~~~~~y~---~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 95 PGHGYSSPLPRGPLYT---LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYST 169 (326)
T ss_pred CCCCcCCCCCCCCcee---hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccC
Confidence 9999 55443333333 25566666666666667789999999999999999999999 799999 666665543
Q ss_pred HHHHHHhhhhhHHHHHHH--HHH-HHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhcc--CCCC----CHHHHHh
Q 013936 268 ICDRFINRRLVQKCYDRV--IAI-GLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL--GKFE----TVDAYYR 338 (433)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~--~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~----~~~~y~~ 338 (433)
.............+.... ... .+............................+........ ...+ +......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELL 249 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEecc
Confidence 222111111000000000 000 000000000000000000000000011111111111110 0000 0000000
Q ss_pred --hCCcccccCCCc-cceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 339 --HSSSANFVRNVS-VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 339 --~~s~~~~l~~i~-~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
.......+.+|. +|+|+++|+.|+++|.+.... ..+..||+++++++++||+.+.|. |+ -+++.+..|+...
T Consensus 250 ~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~-~~~~~pn~~~~~I~~~gH~~h~e~--Pe--~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 250 GFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE-LKKKLPNAELVEIPGAGHLPHLER--PE--EVAALLRSFIARL 324 (326)
T ss_pred CccchHHHhhccccCCceEEEEcCcCCccCHHHHHH-HHhhCCCceEEEeCCCCcccccCC--HH--HHHHHHHHHHHHh
Confidence 122234567776 999999999999999984433 556669999999999999999973 44 4889999998865
Q ss_pred c
Q 013936 416 N 416 (433)
Q Consensus 416 ~ 416 (433)
.
T Consensus 325 ~ 325 (326)
T KOG1454|consen 325 R 325 (326)
T ss_pred c
Confidence 3
No 44
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=4.5e-21 Score=184.99 Aligned_cols=234 Identities=10% Similarity=0.024 Sum_probs=124.8
Q ss_pred HHHHHHH---HHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh
Q 013936 171 YIKHLAF---KMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 171 y~~~~~~---~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
+|..++. .|..++|+|+++|+||+|.|... ......+.+|+.++++.+.. +..++++||||||++++.++.+
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~~~~~a~dl~~ll~~l~l---~~~~~lvG~SmGG~vA~~~A~~ 158 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--PIDTADQADAIALLLDALGI---ARLHAFVGYSYGALVGLQFASR 158 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCC--CCCHHHHHHHHHHHHHHcCC---CcceEEEEECHHHHHHHHHHHH
Confidence 4566775 46445799999999999987421 11122344566665555421 1235799999999999999999
Q ss_pred cCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHH----------HH-HHHHH--HHHH--HHhhhhhhhccCCHHHHhc
Q 013936 248 NGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCY----------DR-VIAIG--LRGF--AQLHQSTVARLADWEGITK 312 (433)
Q Consensus 248 ~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~----------~~-~~~~~--l~~~--~~~~~~~~~~~~~~~~~~~ 312 (433)
+|+ +|.++|++++............ ...+... .. ..... +..+ .......+...........
T Consensus 159 ~P~--~V~~LvLi~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T PRK08775 159 HPA--RVRTLVVVSGAHRAHPYAAAWR-ALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRV 235 (343)
T ss_pred ChH--hhheEEEECccccCCHHHHHHH-HHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCc
Confidence 998 8999999987543321110000 0000000 00 00000 0000 0000000000000000000
Q ss_pred CCCHHHHHHh----hhhccCCCCCHHHHHhhCC-cccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCC
Q 013936 313 SRSIRDFDNH----ATRVLGKFETVDAYYRHSS-SANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH 387 (433)
Q Consensus 313 ~~~~~~~d~~----~~~~~~~~~~~~~y~~~~s-~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~ 387 (433)
......+-.. .... ..........+... ....+.+|++|+|+|+|++|.++|.+..........|+.+++++++
T Consensus 236 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~ 314 (343)
T PRK08775 236 RVAAEDYLDAAGAQYVAR-TPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRS 314 (343)
T ss_pred cchHHHHHHHHHHHHHHh-cChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeC
Confidence 0000111000 0000 00000111111111 1224678999999999999999997755442333447999999985
Q ss_pred -CCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 388 -GGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 388 -gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
+||+.++|. + ..+++.+.+||++..+
T Consensus 315 ~aGH~~~lE~--P--e~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 315 PYGHDAFLKE--T--DRIDAILTTALRSTGE 341 (343)
T ss_pred CccHHHHhcC--H--HHHHHHHHHHHHhccc
Confidence 999999983 3 3599999999987765
No 45
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.85 E-value=6.7e-20 Score=177.36 Aligned_cols=242 Identities=14% Similarity=0.131 Sum_probs=134.0
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC---ccc-CCChHHHHHHHHHHHHhCCCCc
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC---FYN-GGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~---~~~-~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
.+|+|||+||+++++ .. |+.++..|.+ +|+|+++|+||||.|+..... .+. ..+++|+.++++.+. ..+
T Consensus 126 ~~~~ivllHG~~~~~-~~-w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPSQA-YS-YRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDK 198 (383)
T ss_pred CCCeEEEECCCCCCH-HH-HHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCC
Confidence 467899999996543 33 4788888865 799999999999999765331 122 234466666665553 457
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH--HHHHhhhhhHHHHHHHHHH-HHHHHHHhhhhhhhccC
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC--DRFINRRLVQKCYDRVIAI-GLRGFAQLHQSTVARLA 305 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~--~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~ 305 (433)
++++|||+||++++.++.++|+ +|+++|+++++...... ...+.. +...+....+.. .+...............
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~~~~~~~p~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLTKEHAKLPSTLSE-FSNFLLGEIFSQDPLRASDKALTSCGPYAM 275 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCccccccchHHHHH-HHHHHhhhhhhcchHHHHhhhhcccCccCC
Confidence 9999999999999999999998 79999999987542110 000000 000000000000 00000000000000000
Q ss_pred CHHHH--hc-----CCCHH-HHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcC
Q 013936 306 DWEGI--TK-----SRSIR-DFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRAN 377 (433)
Q Consensus 306 ~~~~~--~~-----~~~~~-~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~ 377 (433)
..+.. .. ..... .+...... .. .....+...........+|++|+|+|+|++|++++.+.... ..+.
T Consensus 276 ~~e~~~~~~~~~~~~~~~~~~l~~~~r~-~~--~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~-~a~~- 350 (383)
T PLN03084 276 KEDDAMVYRRPYLTSGSSGFALNAISRS-MK--KELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED-FCKS- 350 (383)
T ss_pred CHHHHHHHhccccCCcchHHHHHHHHHH-hh--cccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH-HHHh-
Confidence 00000 00 00000 00000000 00 00000000000000114689999999999999998875443 3333
Q ss_pred CCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 378 EKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 378 ~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
++.++++++++||+.+.|. ++ .+.+.|.+|++
T Consensus 351 ~~a~l~vIp~aGH~~~~E~--Pe--~v~~~I~~Fl~ 382 (383)
T PLN03084 351 SQHKLIELPMAGHHVQEDC--GE--ELGGIISGILS 382 (383)
T ss_pred cCCeEEEECCCCCCcchhC--HH--HHHHHHHHHhh
Confidence 5889999999999999883 33 48888888875
No 46
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.85 E-value=1.4e-20 Score=182.27 Aligned_cols=112 Identities=19% Similarity=0.133 Sum_probs=76.9
Q ss_pred CCcEEEEECCCCCCChhH---------HHHHHH---HHHHhCCceEEEEeCCC--CCCCCCCC----CCccc----CCCh
Q 013936 153 KNPIVVVIPGLTSDSAAA---------YIKHLA---FKMAGHGWNVVVSNHRG--LGGISLTS----DCFYN----GGWT 210 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~---------y~~~~~---~~l~~~G~~vv~~d~rG--~G~s~~~~----~~~~~----~~~~ 210 (433)
..|+||++||+++++... +|..++ ..+..++|+|+++|+|| +|.|...+ ...+. ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 457899999998765432 456564 25656789999999999 44443211 11111 1123
Q ss_pred HHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 211 EDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~-i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+|..+.+..+.+.....+ ++++||||||++++.++.++|+ +++++|++++....
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCcC
Confidence 455544444445555566 9999999999999999999998 79999999976543
No 47
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.85 E-value=6.5e-20 Score=154.99 Aligned_cols=231 Identities=18% Similarity=0.198 Sum_probs=159.5
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHH-HhCCceEEEE
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKM-AGHGWNVVVS 189 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l-~~~G~~vv~~ 189 (433)
+++|+|..+.++|..++...|... +.++|+++++||.+|+..-. -..++-+ ..-+.+|+.+
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~----------------E~S~pTlLyfh~NAGNmGhr--~~i~~~fy~~l~mnv~iv 112 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS----------------ESSRPTLLYFHANAGNMGHR--LPIARVFYVNLKMNVLIV 112 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc----------------cCCCceEEEEccCCCcccch--hhHHHHHHHHcCceEEEE
Confidence 479999999999999998888752 34889999999998865332 2333333 3458999999
Q ss_pred eCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 190 NHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 190 d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
++||+|.|++.. ...|..-|.+++++|+..+. ..+++++.|-|+||.+|+..|++..+ ++.++|+-..-....
T Consensus 113 sYRGYG~S~Gsp---sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SIp 187 (300)
T KOG4391|consen 113 SYRGYGKSEGSP---SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSIP 187 (300)
T ss_pred EeeccccCCCCc---cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccch
Confidence 999999998643 34567789999999998763 36789999999999999999999877 788887653322211
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccC
Q 013936 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVR 347 (433)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~ 347 (433)
... +. .+..+-.+. +..+. +++ .-.+...+.
T Consensus 188 ~~~--i~--~v~p~~~k~------------------------------i~~lc---------~kn------~~~S~~ki~ 218 (300)
T KOG4391|consen 188 HMA--IP--LVFPFPMKY------------------------------IPLLC---------YKN------KWLSYRKIG 218 (300)
T ss_pred hhh--hh--eeccchhhH------------------------------HHHHH---------HHh------hhcchhhhc
Confidence 000 00 000000000 00000 000 011123456
Q ss_pred CCccceEEEeeCCCCcCCCCCCChh-HHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 348 NVSVPLLCISTLDDPVCTREAIPWD-ECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 348 ~i~~P~Lii~g~dD~ivp~~~~~~~-~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
+.++|.|+|.|..|.++|+..+... ....+.+.++..+|+|.|..... .+. +-+++.+||.++...
T Consensus 219 ~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i---~dG--Yfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 219 QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI---CDG--YFQAIEDFLAEVVKS 285 (300)
T ss_pred cccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE---ecc--HHHHHHHHHHHhccC
Confidence 7789999999999999999766542 23456788999999999976543 244 449999999988774
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.84 E-value=1.8e-19 Score=168.16 Aligned_cols=254 Identities=14% Similarity=0.086 Sum_probs=145.7
Q ss_pred CCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCC--hhHHHHHHHHHHHhCCceEEEEeCCCCCCCCC
Q 013936 122 PDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDS--AAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL 199 (433)
Q Consensus 122 ~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s--~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~ 199 (433)
.||.++...+..|.+ ..++.||++||.++.. ....+..+++.|+++||+|+++|+||||.|+.
T Consensus 9 ~~~~~l~g~~~~p~~---------------~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~ 73 (274)
T TIGR03100 9 CEGETLVGVLHIPGA---------------SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEG 73 (274)
T ss_pred cCCcEEEEEEEcCCC---------------CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCC
Confidence 557778777776642 2345577777754321 11223568899999999999999999999874
Q ss_pred CCCCcccCCChHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhh
Q 013936 200 TSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLV 278 (433)
Q Consensus 200 ~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~ 278 (433)
.. .....+.+|+.++++++++..+ ..+++++||||||.+++.++... . +++++|++++++....... .. ..
T Consensus 74 ~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~~~~~~~~~--~~-~~ 145 (274)
T TIGR03100 74 EN--LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPWVRTEAAQA--AS-RI 145 (274)
T ss_pred CC--CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCccCCcccch--HH-HH
Confidence 32 1223456899999999988764 35799999999999999887653 3 6999999988754322100 00 01
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhh-h-ccCCCCCHHHHHhhCCcccccCCCccceEEE
Q 013936 279 QKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHAT-R-VLGKFETVDAYYRHSSSANFVRNVSVPLLCI 356 (433)
Q Consensus 279 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii 356 (433)
...+....... .+.. ..+....+...+. .++..... . +.......... .......+.++++|+|++
T Consensus 146 ~~~~~~~~~~~--~~~~---~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~P~ll~ 213 (274)
T TIGR03100 146 RHYYLGQLLSA--DFWR---KLLSGEVNLGSSL-----RGLGDALLKARQKGDEVAHGGL--AERMKAGLERFQGPVLFI 213 (274)
T ss_pred HHHHHHHHhCh--HHHH---HhcCCCccHHHHH-----HHHHHHHHhhhhcCCCcccchH--HHHHHHHHHhcCCcEEEE
Confidence 11111111111 1101 0011111111100 01111000 0 00000000000 001123556789999999
Q ss_pred eeCCCCcCCCCC-----CChhHH-hcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 357 STLDDPVCTREA-----IPWDEC-RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 357 ~g~dD~ivp~~~-----~~~~~~-~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
+|..|+..+.-. ...... ..+++++++.++++||+...| ..+..+.+.|.+||+
T Consensus 214 ~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 214 LSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred EcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 999999864210 011111 245899999999999976555 333468899999985
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=99.84 E-value=1.3e-19 Score=187.63 Aligned_cols=271 Identities=18% Similarity=0.220 Sum_probs=148.0
Q ss_pred eEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 116 RHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 116 r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
++.+...||..+.+.++. ++.+|+|||+||+++++ .+|+.+...| .+||+|+++|+||||
T Consensus 4 ~~~~~~~~g~~l~~~~~g-----------------~~~~~~ivllHG~~~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G 63 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWG-----------------DPDRPTVVLVHGYPDNH--EVWDGVAPLL-ADRFRVVAYDVRGAG 63 (582)
T ss_pred eEEEEeeCCEEEEEEEcC-----------------CCCCCeEEEEcCCCchH--HHHHHHHHHh-hcceEEEEecCCCCC
Confidence 355566789999887653 22467899999997543 4457888888 568999999999999
Q ss_pred CCCCCCCC-cc-cCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHH
Q 013936 196 GISLTSDC-FY-NGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI 273 (433)
Q Consensus 196 ~s~~~~~~-~~-~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~ 273 (433)
.|+..... .+ ...+.+|+.++++.+. ...+++++||||||.+++.++.+......+..++.++++... ....+.
T Consensus 64 ~S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~-~~~~~~ 139 (582)
T PRK05855 64 RSSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD-HVGFWL 139 (582)
T ss_pred CCCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH-HHHHHH
Confidence 99754322 22 2345577777777653 234699999999999999887773222245556656554321 111111
Q ss_pred hhhh---hHHHHHHHHHHHHHHH-HH-hhhhhhhc----c-C--CHHHH-hc--CCCHHHHHHhhhhccCCCCCHHHH--
Q 013936 274 NRRL---VQKCYDRVIAIGLRGF-AQ-LHQSTVAR----L-A--DWEGI-TK--SRSIRDFDNHATRVLGKFETVDAY-- 336 (433)
Q Consensus 274 ~~~~---~~~~~~~~~~~~l~~~-~~-~~~~~~~~----~-~--~~~~~-~~--~~~~~~~d~~~~~~~~~~~~~~~y-- 336 (433)
.... ................ .. .....+.. . . ..... .. ............. .........+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 218 (582)
T PRK05855 140 RSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL-SDGAHGVKLYRA 218 (582)
T ss_pred hhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-ccccchHHHHHh
Confidence 1000 0000000000000000 00 00000000 0 0 00000 00 0000000000000 0001111111
Q ss_pred -HhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 337 -YRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 337 -~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
+........+.++++|+|+|+|++|+++|.+.... ..+..++..+++++ +||+.++|. ++ .+.+.+.+|++..
T Consensus 219 ~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e~--p~--~~~~~i~~fl~~~ 292 (582)
T PRK05855 219 NMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDD-LSRWVPRLWRREIK-AGHWLPMSH--PQ--VLAAAVAEFVDAV 292 (582)
T ss_pred hhhhhhccCccCCccCceEEEEeCCCcccCHHHhcc-ccccCCcceEEEcc-CCCcchhhC--hh--HHHHHHHHHHHhc
Confidence 11111122355689999999999999999876554 34556778888876 799999884 33 5889999999986
Q ss_pred cc
Q 013936 416 NT 417 (433)
Q Consensus 416 ~~ 417 (433)
..
T Consensus 293 ~~ 294 (582)
T PRK05855 293 EG 294 (582)
T ss_pred cC
Confidence 54
No 50
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.83 E-value=1.1e-19 Score=177.46 Aligned_cols=254 Identities=16% Similarity=0.096 Sum_probs=134.0
Q ss_pred CCcEEEEECCCCCCChhH-----------HHHHHHH---HHHhCCceEEEEeCCC-CCCCCCCCC------C-------c
Q 013936 153 KNPIVVVIPGLTSDSAAA-----------YIKHLAF---KMAGHGWNVVVSNHRG-LGGISLTSD------C-------F 204 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~-----------y~~~~~~---~l~~~G~~vv~~d~rG-~G~s~~~~~------~-------~ 204 (433)
..|+||++||+++++... +|..++. .+..++|+|+++|+|| +|+|...+. . .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 368899999998766431 3455552 4435689999999999 455543221 0 1
Q ss_pred c-cCCChHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHH
Q 013936 205 Y-NGGWTEDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCY 282 (433)
Q Consensus 205 ~-~~~~~~Dl~~~i~~l~~~~~~~~-i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 282 (433)
+ ...+.+|+.++++. .+..+ .+++||||||++++.++.++|+ +|+++|++++..........+.......+.
T Consensus 127 ~~~~~~~~~~~~~l~~----l~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~ 200 (379)
T PRK00175 127 ITIRDWVRAQARLLDA----LGITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSARLSAQNIAFNEVARQAIL 200 (379)
T ss_pred CCHHHHHHHHHHHHHH----hCCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcccCHHHHHHHHHHHHHHH
Confidence 1 11233444444444 34456 5899999999999999999998 899999998755432111100000000000
Q ss_pred -------------------HHHHHHHH--------HHHHHhhhhhhhccCCHHHHhcCCCHHHHHH----hhhhcc--CC
Q 013936 283 -------------------DRVIAIGL--------RGFAQLHQSTVARLADWEGITKSRSIRDFDN----HATRVL--GK 329 (433)
Q Consensus 283 -------------------~~~~~~~l--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~--~~ 329 (433)
........ ..+.........................+.. ...... ..
T Consensus 201 ~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~ 280 (379)
T PRK00175 201 ADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANS 280 (379)
T ss_pred hCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchH
Confidence 00000000 0000000000000000000000000000000 000000 00
Q ss_pred CCCHHHHHhhC--------CcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCe----EEEEcC-CCCeeeeccC
Q 013936 330 FETVDAYYRHS--------SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKI----ILATTR-HGGHLAFYEG 396 (433)
Q Consensus 330 ~~~~~~y~~~~--------s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~----~l~~~~-~gGH~~~~e~ 396 (433)
+......+... +....+.+|++|+|+|+|++|.++|++.... .....++. ++++++ ++||+.++|.
T Consensus 281 ~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~-la~~i~~a~~~~~l~~i~~~~GH~~~le~ 359 (379)
T PRK00175 281 YLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSRE-IVDALLAAGADVSYAEIDSPYGHDAFLLD 359 (379)
T ss_pred HHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHH-HHHHHHhcCCCeEEEEeCCCCCchhHhcC
Confidence 00000111111 1235678999999999999999999876554 44444554 777775 8999999984
Q ss_pred CcCCCCcHHHHHHHHHHHhcc
Q 013936 397 ITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 397 ~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
++ .+++.+.+||+.+..
T Consensus 360 --p~--~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 360 --DP--RYGRLVRAFLERAAR 376 (379)
T ss_pred --HH--HHHHHHHHHHHhhhh
Confidence 33 589999999987654
No 51
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.83 E-value=1.9e-19 Score=175.75 Aligned_cols=239 Identities=15% Similarity=0.114 Sum_probs=133.3
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
++.|+||++||++++. ..| ..++..|.+ +|+|+++|+||||.|...... ...+++.+.+..+.+..+..++++
T Consensus 129 ~~~~~vl~~HG~~~~~-~~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 201 (371)
T PRK14875 129 GDGTPVVLIHGFGGDL-NNW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHL 201 (371)
T ss_pred CCCCeEEEECCCCCcc-chH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEE
Confidence 3467899999997654 333 567777765 599999999999998533221 223555555555555566668999
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHh
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGIT 311 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 311 (433)
+||||||.+++.++.++++ ++.++|+++++.............+........+...+...... ...... ...+...
T Consensus 202 vG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 277 (371)
T PRK14875 202 VGHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFAD-PALVTR-QMVEDLL 277 (371)
T ss_pred EeechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcC-hhhCCH-HHHHHHH
Confidence 9999999999999999887 79999999875332111100000000000000000000000000 000000 0000000
Q ss_pred ---cCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCC
Q 013936 312 ---KSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHG 388 (433)
Q Consensus 312 ---~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~g 388 (433)
................ +... ....+....+.++++|+|+++|++|+++|.+... ...+++++.+++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~----~l~~~~~~~~~~~~ 348 (371)
T PRK14875 278 KYKRLDGVDDALRALADAL--FAGG---RQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ----GLPDGVAVHVLPGA 348 (371)
T ss_pred HHhccccHHHHHHHHHHHh--ccCc---ccchhHHHHHhcCCCCEEEEEECCCCccCHHHHh----hccCCCeEEEeCCC
Confidence 0000010000000000 0000 0001122356789999999999999999865322 23457899999999
Q ss_pred CeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 389 GHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 389 GH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
||+.++|. +..+.+.|.+||+.
T Consensus 349 gH~~~~e~----p~~~~~~i~~fl~~ 370 (371)
T PRK14875 349 GHMPQMEA----AADVNRLLAEFLGK 370 (371)
T ss_pred CCChhhhC----HHHHHHHHHHHhcc
Confidence 99999883 23578888888763
No 52
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.83 E-value=1.5e-19 Score=168.58 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=79.0
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
.++|+|||+||+.+++ .. |..++..|.++||+|+++|+||||.|....... .++.++...+.+.+.......++++
T Consensus 16 ~~~p~vvliHG~~~~~-~~-w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WC-WYKIRCLMENSGYKVTCIDLKSAGIDQSDADSV--TTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCCCc-Cc-HHHHHHHHHhCCCEEEEecccCCCCCCCCcccC--CCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4578999999997654 33 478899998889999999999999875322211 2233344444455544333468999
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
+||||||.++..++..+++ +|+++|++++.
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~ 121 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAAT 121 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccc
Confidence 9999999999999988887 79999999763
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.82 E-value=1.5e-19 Score=174.77 Aligned_cols=106 Identities=11% Similarity=0.170 Sum_probs=85.2
Q ss_pred CcEEEEECCCCCCChhHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCCh-HHHHHHHHHHHHhCCC
Q 013936 154 NPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYPE 226 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~------~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~ 226 (433)
++.||++||+..+ .|+ +.+++.|.++||+|+++|+||+|.++.. .....+. +|+.++++++++..+.
T Consensus 62 ~~pvl~v~~~~~~---~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~---~~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 62 KTPLLIVYALVNR---PYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY---LTLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCcEEEecccccc---ceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc---CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3448999998532 222 5799999999999999999999876421 1112233 4688999999999888
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
.+++++||||||++++.+++.+++ +++++|++++|++..
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFE 174 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCch--heeeEEEeccccccC
Confidence 899999999999999999999887 799999999998764
No 54
>PRK10566 esterase; Provisional
Probab=99.80 E-value=2e-18 Score=158.99 Aligned_cols=208 Identities=14% Similarity=0.120 Sum_probs=125.1
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC-cccC------CChHHHHHHHHHHHHhC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC-FYNG------GWTEDLRRVIDYLHCQY 224 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~-~~~~------~~~~Dl~~~i~~l~~~~ 224 (433)
++.|+||++||++++. .. +..+++.|+++||+|+++|+||+|.+....+. .... ...+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~~-~~-~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSK-LV-YSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCccc-ch-HHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999997653 33 47789999999999999999999975321111 1110 12367788888887663
Q ss_pred --CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 013936 225 --PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVA 302 (433)
Q Consensus 225 --~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 302 (433)
+.++++++||||||.+++.++...++ +.+.+.+..+..... +.+ ..+.. ...
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~----~~~----~~~~~---------------~~~ 156 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTS----LAR----TLFPP---------------LIP 156 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHH----HHH----Hhccc---------------ccc
Confidence 35689999999999999999888776 555554433211100 000 00000 000
Q ss_pred ccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCC-ccceEEEeeCCCCcCCCCCCChhHH--hcC--
Q 013936 303 RLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNV-SVPLLCISTLDDPVCTREAIPWDEC--RAN-- 377 (433)
Q Consensus 303 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i-~~P~Lii~g~dD~ivp~~~~~~~~~--~~~-- 377 (433)
. . .....++.... .. ....+....+.++ ++|+|+++|++|+++|.+....... ...
T Consensus 157 ~--~------~~~~~~~~~~~-~~----------~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 157 E--T------AAQQAEFNNIV-AP----------LAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred c--c------cccHHHHHHHH-HH----------HhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 0 0 00001111110 00 0111222345566 7999999999999999875443211 111
Q ss_pred -CCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 378 -EKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 378 -~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
.++++..+++.||... ++ ..+.+.+||++
T Consensus 218 ~~~~~~~~~~~~~H~~~-----~~---~~~~~~~fl~~ 247 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT-----PE---ALDAGVAFFRQ 247 (249)
T ss_pred CcceEEEecCCCCCccC-----HH---HHHHHHHHHHh
Confidence 2578889999999631 11 45889999985
No 55
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.79 E-value=1.7e-19 Score=150.91 Aligned_cols=228 Identities=12% Similarity=0.093 Sum_probs=152.3
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
.|++++|.-|++...| ......+.+. -+.+|++|.||+|.|..+..++.-.-+.+|...+++-++.. .-.++.++|+
T Consensus 44 ~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGW 121 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGW 121 (277)
T ss_pred eeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeee
Confidence 4899999988877666 4444444433 49999999999999986544443344557888888776554 3568999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCC
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (433)
|=||..++..|+++++ .|..+|+.++.........+..+.+ + -.+++..+. +..+......+.+ .+
T Consensus 122 SdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgi-R-dv~kWs~r~--------R~P~e~~Yg~e~f--~~ 187 (277)
T KOG2984|consen 122 SDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGI-R-DVNKWSARG--------RQPYEDHYGPETF--RT 187 (277)
T ss_pred cCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhch-H-HHhhhhhhh--------cchHHHhcCHHHH--HH
Confidence 9999999999999998 7999998887544433222221111 0 011111111 1111111111111 11
Q ss_pred CHHHHHHhhhhccCCCCCHHHHHhhC---CcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCee
Q 013936 315 SIRDFDNHATRVLGKFETVDAYYRHS---SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHL 391 (433)
Q Consensus 315 ~~~~~d~~~~~~~~~~~~~~~y~~~~---s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~ 391 (433)
...+|.+.+ .+++..+ -|...+++|+||+||+||+.||+|+...+.+ .....+.+++.+.+.|+|.
T Consensus 188 ~wa~wvD~v----------~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~f-i~~~~~~a~~~~~peGkHn 256 (277)
T KOG2984|consen 188 QWAAWVDVV----------DQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCF-IPVLKSLAKVEIHPEGKHN 256 (277)
T ss_pred HHHHHHHHH----------HHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccc-hhhhcccceEEEccCCCcc
Confidence 222333222 1222221 2567899999999999999999999998887 6778899999999999998
Q ss_pred eeccCCcCCCCcHHHHHHHHHHH
Q 013936 392 AFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 392 ~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
-++. -..|+++.+.+||++
T Consensus 257 ~hLr----ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 257 FHLR----YAKEFNKLVLDFLKS 275 (277)
T ss_pred eeee----chHHHHHHHHHHHhc
Confidence 8875 334899999999985
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.78 E-value=6e-18 Score=148.78 Aligned_cols=215 Identities=18% Similarity=0.180 Sum_probs=148.1
Q ss_pred EEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHh-CCceEEEEeCCCCCC
Q 013936 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGG 196 (433)
Q Consensus 118 ~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~ 196 (433)
.++++-|..+.--++.++ ....++++++||...+-.. . -.+...+.. -+++++.+|++|.|.
T Consensus 39 ~~~t~rgn~~~~~y~~~~---------------~~~~~~lly~hGNa~Dlgq-~-~~~~~~l~~~ln~nv~~~DYSGyG~ 101 (258)
T KOG1552|consen 39 KVKTSRGNEIVCMYVRPP---------------EAAHPTLLYSHGNAADLGQ-M-VELFKELSIFLNCNVVSYDYSGYGR 101 (258)
T ss_pred EeecCCCCEEEEEEEcCc---------------cccceEEEEcCCcccchHH-H-HHHHHHHhhcccceEEEEecccccc
Confidence 455666666655555443 2346899999998655432 2 233344433 479999999999999
Q ss_pred CCCCCCCcccCCChHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhh
Q 013936 197 ISLTSDCFYNGGWTEDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINR 275 (433)
Q Consensus 197 s~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~ 275 (433)
|.++..+. +..+|+.++.+++++.+ +.++|+++|+|||+..++.+|++.+ +.++|+.++-.+....
T Consensus 102 S~G~psE~---n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv------ 168 (258)
T KOG1552|consen 102 SSGKPSER---NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRV------ 168 (258)
T ss_pred cCCCcccc---cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhh------
Confidence 98765433 56699999999999999 5889999999999999999999886 7888988764333100
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEE
Q 013936 276 RLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLC 355 (433)
Q Consensus 276 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Li 355 (433)
+++. .....-+ ..|. ..+.++.|++|+|+
T Consensus 169 -----~~~~----------------------------~~~~~~~--------d~f~----------~i~kI~~i~~PVLi 197 (258)
T KOG1552|consen 169 -----AFPD----------------------------TKTTYCF--------DAFP----------NIEKISKITCPVLI 197 (258)
T ss_pred -----hccC----------------------------cceEEee--------cccc----------ccCcceeccCCEEE
Confidence 0000 0000000 0011 14677889999999
Q ss_pred EeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 356 ISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 356 i~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
+||++|++++...............+-.+.+++||....- .+ .+.+.+.+|+..+...
T Consensus 198 iHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~----~~-~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 198 IHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL----YP-EYIEHLRRFISSVLPS 255 (258)
T ss_pred EecccCceecccccHHHHHhccccCCCcEEecCCCccccc----CH-HHHHHHHHHHHHhccc
Confidence 9999999999987666444444456778889999974332 21 2667888998887664
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.78 E-value=1.3e-17 Score=187.55 Aligned_cols=247 Identities=18% Similarity=0.157 Sum_probs=136.1
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC-c---ccCCChHHHHHHHHHHHHhCCCCc
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC-F---YNGGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~-~---~~~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
.+|+|||+||+++++. . |..++..|.+ +|+|+++|+||||.|...... . ......+++.+.+..+.++....+
T Consensus 1370 ~~~~vVllHG~~~s~~-~-w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-D-WIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHH-H-HHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999977653 3 4778888865 699999999999998753210 0 001123444443333333344568
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHH-HHHhhhhhHHHHHHHHHHHHHHHHHhhh-hhhhccCC
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD-RFINRRLVQKCYDRVIAIGLRGFAQLHQ-STVARLAD 306 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 306 (433)
++++||||||.+++.++.++|+ +++++|++++........ ...................+..+..... ..+
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~----- 1519 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSD--KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGEL----- 1519 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHH-----
Confidence 9999999999999999999998 799999997643221110 0000000000000000001111111000 000
Q ss_pred HHHHhcCCCHHHHHHhhhhccC--CCCCHHHHHh------hCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCC
Q 013936 307 WEGITKSRSIRDFDNHATRVLG--KFETVDAYYR------HSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANE 378 (433)
Q Consensus 307 ~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~y~~------~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~ 378 (433)
+... .....+......... ........+. ..+....+++|++|+|+|+|++|++++ +.... ..+..+
T Consensus 1520 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~-~~~~i~ 1594 (1655)
T PLN02980 1520 WKSL---RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQK-MYREIG 1594 (1655)
T ss_pred hhhh---ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHH-HHHHcc
Confidence 0000 000000000000000 0000000010 111224678999999999999999875 22222 233222
Q ss_pred ------------CeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 379 ------------KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 379 ------------~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
.+++++++++||..++|. ++ .+.+.|.+||+....+
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~--Pe--~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLEN--PL--PVIRALRKFLTRLHNS 1642 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHC--HH--HHHHHHHHHHHhcccc
Confidence 368999999999999984 33 5899999999987764
No 58
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.77 E-value=1.4e-18 Score=157.37 Aligned_cols=207 Identities=20% Similarity=0.202 Sum_probs=124.6
Q ss_pred ceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 184 WNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 184 ~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
|+|+++|+||+|.|+............+|+.+.++.+.+..+..+++++||||||++++.|++++|+ +|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999873101222333458999999999999888889999999999999999999999 89999999886
Q ss_pred C--ChHHHHHHHhhhhhHHHHHHH----HHHHHHHHHHhhh---hhhhc--cCCHHHHhcCCCHHHHHHh-hh-hccCCC
Q 013936 264 W--DLLICDRFINRRLVQKCYDRV----IAIGLRGFAQLHQ---STVAR--LADWEGITKSRSIRDFDNH-AT-RVLGKF 330 (433)
Q Consensus 264 ~--~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~d~~-~~-~~~~~~ 330 (433)
. ..................... ............. ..... ..+...... ....... .. .....+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQ---SQQYARFAETDAFDNMF 155 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH---HHHHHHTCHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccc---hhhhhHHHHHHHHhhhc
Confidence 3 111111111100000000000 0001111000000 00000 000000000 0000000 00 000000
Q ss_pred CCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccC
Q 013936 331 ETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEG 396 (433)
Q Consensus 331 ~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~ 396 (433)
.....++........+.+|++|+++++|++|+++|++.... ..+..|+.++++++++||+.++++
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHS
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcC
Confidence 02334455555567788999999999999999999887665 678899999999999999999985
No 59
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=3.6e-18 Score=155.64 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=149.4
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcE
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 229 (433)
-...|+++++||+.|+. ..| +.+...|.+. |-.++++|.|-||.|+......+. .+++|+..+++..+..+-..++
T Consensus 49 ~~~~Pp~i~lHGl~GS~-~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~-~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSK-ENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE-AMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred cCCCCceEEecccccCC-CCH-HHHHHHhcccccCceEEEecccCCCCccccccCHH-HHHHHHHHHHHHcccccccCCc
Confidence 45678899999998865 444 8898888774 789999999999999876665543 4678999988888765556789
Q ss_pred EEEEechhH-HHHHHHHhhcCCCCCceEEEEEcC-CCChHHH-HHHHhhhhhHHHHHHHHH--------HHHHHHHHhhh
Q 013936 230 YAVGTSIGA-NILVKYLGENGVNTPLVGAAAICS-PWDLLIC-DRFINRRLVQKCYDRVIA--------IGLRGFAQLHQ 298 (433)
Q Consensus 230 ~lvG~S~GG-~ia~~~a~~~~~~~~v~~~v~i~~-p~~~~~~-~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~~ 298 (433)
.++|||||| -+++.+....|+ .+..+|++.. |...... ... ...+..+.. .+.+...+...
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~~e~------~e~i~~m~~~d~~~~~~~~rke~~~~l~ 197 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSYGEY------RELIKAMIQLDLSIGVSRGRKEALKSLI 197 (315)
T ss_pred eecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCcccchH------HHHHHHHHhccccccccccHHHHHHHHH
Confidence 999999999 666666777777 6777777753 3211110 000 011111100 11111111110
Q ss_pred hhhhccCCHHHHhcCCCHHHHHHhhhh--ccCC-------CCCHHHHHhh---CCccccc--CCCccceEEEeeCCCCcC
Q 013936 299 STVARLADWEGITKSRSIRDFDNHATR--VLGK-------FETVDAYYRH---SSSANFV--RNVSVPLLCISTLDDPVC 364 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~-------~~~~~~y~~~---~s~~~~l--~~i~~P~Lii~g~dD~iv 364 (433)
. +.....+++|-..--. +..+ ..++.+.+.. .+....+ ..-..|+|++.|.+++++
T Consensus 198 ~----------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv 267 (315)
T KOG2382|consen 198 E----------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFV 267 (315)
T ss_pred H----------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCc
Confidence 0 1111111111111000 0000 1122222222 2222222 556899999999999999
Q ss_pred CCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 365 TREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 365 p~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
+.+..+. ..+..|++++..++++||+.+.|. |+ -+.+.|.+|++..
T Consensus 268 ~~~~~~~-~~~~fp~~e~~~ld~aGHwVh~E~--P~--~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 268 PDEHYPR-MEKIFPNVEVHELDEAGHWVHLEK--PE--EFIESISEFLEEP 313 (315)
T ss_pred ChhHHHH-HHHhccchheeecccCCceeecCC--HH--HHHHHHHHHhccc
Confidence 9987776 677889999999999999999994 44 4788888888753
No 60
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.76 E-value=3.9e-17 Score=168.58 Aligned_cols=247 Identities=19% Similarity=0.138 Sum_probs=165.9
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
..+.+...+...||.++..+.+.|.+.+ ..++-|+||++||.+.......+....+.++.+||.|+.+|
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~-----------~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFD-----------PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCC-----------CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeC
Confidence 4566778899999999999988886531 12235999999997644333334677888999999999999
Q ss_pred CCCCCCCCCC----CCCcccCCChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 191 HRGLGGISLT----SDCFYNGGWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 191 ~rG~G~s~~~----~~~~~~~~~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
+||.++-... ....+.....+|+.+.++++.+ .| ..+++++|+|+||.+++..+...+. ++++++..++
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~ 506 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGG 506 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCc
Confidence 9996653111 1123334566899999996644 33 3479999999999999998888874 8888877665
Q ss_pred CChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcc
Q 013936 264 WDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSA 343 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~ 343 (433)
.+........ .. .+ ...+ +.....+ .. -.++|...|+.
T Consensus 507 ~~~~~~~~~~---------~~----~~-------------~~~~------------~~~~~~~---~~-~~~~~~~~sp~ 544 (620)
T COG1506 507 VDWLLYFGES---------TE----GL-------------RFDP------------EENGGGP---PE-DREKYEDRSPI 544 (620)
T ss_pred chhhhhcccc---------ch----hh-------------cCCH------------HHhCCCc---cc-ChHHHHhcChh
Confidence 4431100000 00 00 0000 0000000 00 34677788999
Q ss_pred cccCCCccceEEEeeCCCCcCCCCCCCh---hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 344 NFVRNVSVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 344 ~~l~~i~~P~Lii~g~dD~ivp~~~~~~---~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
....+|++|+|+|||++|.-||.+.... .+.+...+++++++|+.||-.--. .+..-+.+.+.+|++....
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999874433 244578899999999999943221 1111245778888876543
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.74 E-value=1.5e-17 Score=139.66 Aligned_cols=144 Identities=20% Similarity=0.276 Sum_probs=110.4
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh-CCCCcEEEEEe
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ-YPEVPLYAVGT 234 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvG~ 234 (433)
+||++||++++ ...| ..+++.++++||.|+++|+||+|.+.. .+++.++++.+... ....+++++||
T Consensus 1 ~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGS-RRDY-QPLAEALAEQGYAVVAFDYPGHGDSDG----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTT-THHH-HHHHHHHHHTTEEEEEESCTTSTTSHH----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCC-HHHH-HHHHHHHHHCCCEEEEEecCCCCccch----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 48999999765 4444 789999999999999999999998632 14778888877443 35578999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCC
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (433)
|+||.+++.++.+. . +++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~-~--~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-P--RVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-T--TESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-c--ceeEEEEecCccc-------------------------------------------------
Confidence 99999999999988 3 5999999977200
Q ss_pred CHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCee
Q 013936 315 SIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHL 391 (433)
Q Consensus 315 ~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~ 391 (433)
...+.+.++|+++++|++|+++|.+.......+...+.++.++++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112345569999999999999887665534445578999999999994
No 62
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.74 E-value=9.3e-17 Score=155.84 Aligned_cols=256 Identities=13% Similarity=0.034 Sum_probs=136.8
Q ss_pred CCCcEEEEECCCCCCChh-----------HHHHHHHH---HHHhCCceEEEEeCCCCCCC-------CCCC------CCc
Q 013936 152 EKNPIVVVIPGLTSDSAA-----------AYIKHLAF---KMAGHGWNVVVSNHRGLGGI-------SLTS------DCF 204 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~-----------~y~~~~~~---~l~~~G~~vv~~d~rG~G~s-------~~~~------~~~ 204 (433)
...++||++|+++|+++. .||..++- .+-...|.||++|..|-|.| .++. .+.
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345889999999986532 24455543 23345699999999996532 1111 111
Q ss_pred ----ccCCChHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHH-HHHhhhhh
Q 013936 205 ----YNGGWTEDLRRVIDYLHCQYPEVPLY-AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD-RFINRRLV 278 (433)
Q Consensus 205 ----~~~~~~~Dl~~~i~~l~~~~~~~~i~-lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~-~~~~~~~~ 278 (433)
+..-..+|..+.+..+.++....++. ++||||||++++.++.++|+ +++++|++++........ ..+.....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecCCCCChhHHHHHHHHHH
Confidence 11122366666665555666667775 99999999999999999999 899999998654432211 11110000
Q ss_pred HHHHHH------------HHHHHHHHHHH----------hhhhhhhccC--CHH---HHhcCCCHHHHHHhhhhccCCCC
Q 013936 279 QKCYDR------------VIAIGLRGFAQ----------LHQSTVARLA--DWE---GITKSRSIRDFDNHATRVLGKFE 331 (433)
Q Consensus 279 ~~~~~~------------~~~~~l~~~~~----------~~~~~~~~~~--~~~---~~~~~~~~~~~d~~~~~~~~~~~ 331 (433)
..+... ....++..... .....+.+.. ..+ ......++..+-+....+...-.
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 000000 00001100000 0000000000 000 00000011111111110000000
Q ss_pred CHHHH------HhhC-------CcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcC----CCeEEEEcCC-CCeeee
Q 013936 332 TVDAY------YRHS-------SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRAN----EKIILATTRH-GGHLAF 393 (433)
Q Consensus 332 ~~~~y------~~~~-------s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~----~~~~l~~~~~-gGH~~~ 393 (433)
+...| .+.. +....+.+|++|+|+|+|++|.++|++.... ..+.. ++++++++++ .||+.+
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~-la~~lp~~~~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYK-MVDILQKQGKYAEVYEIESINGHMAG 370 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHH-HHHHhhhcCCCeEEEEECCCCCcchh
Confidence 00011 1000 2234677899999999999999999875543 33333 4799999985 899999
Q ss_pred ccCCcCCCCcHHHHHHHHHHH
Q 013936 394 YEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 394 ~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
+|. ++ .+.+.+.+||+.
T Consensus 371 le~--p~--~~~~~I~~FL~~ 387 (389)
T PRK06765 371 VFD--IH--LFEKKIYEFLNR 387 (389)
T ss_pred hcC--HH--HHHHHHHHHHcc
Confidence 983 23 588889999864
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.72 E-value=2.2e-16 Score=144.77 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=88.5
Q ss_pred CCCcEEEEECCCCCCCh--hHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcE
Q 013936 152 EKNPIVVVIPGLTSDSA--AAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~--~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 229 (433)
..+|+||++||+++... ...+..+++.|.++||+|+++|+||||.|+..........+.+|+.++++++++. +..++
T Consensus 23 ~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v 101 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPV 101 (266)
T ss_pred CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCE
Confidence 34689999999865322 2334677899999999999999999999875432222234678999999999876 46789
Q ss_pred EEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 230 ~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+++||||||.+++.++.++++ ++.++|++++....
T Consensus 102 ~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 102 TLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred EEEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 999999999999999999887 79999999876554
No 64
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.72 E-value=8.5e-17 Score=152.74 Aligned_cols=239 Identities=19% Similarity=0.160 Sum_probs=141.4
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
.+.++..|+..+ ++|......|+. +.+.|+||++.|+-+ -.+.+++.+.+++..+|+.++++|.
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~--------------~~p~P~VIv~gGlDs-~qeD~~~l~~~~l~~rGiA~LtvDm 226 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG--------------EKPYPTVIVCGGLDS-LQEDLYRLFRDYLAPRGIAMLTVDM 226 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS--------------SS-EEEEEEE--TTS--GGGGHHHHHCCCHHCT-EEEEE--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC--------------CCCCCEEEEeCCcch-hHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 456788888876 888887777653 567899999999854 4555556666778999999999999
Q ss_pred CCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH
Q 013936 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (433)
Q Consensus 192 rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~ 269 (433)
||.|.|.... ...+...-..++++++...- ...+|.++|.|+||++|.+.|..++. +|+++|+.+++....-.
T Consensus 227 PG~G~s~~~~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 227 PGQGESPKWP---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFT 301 (411)
T ss_dssp TTSGGGTTT----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH
T ss_pred CCCcccccCC---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhc
Confidence 9999874211 12222234567888887642 24589999999999999999987766 79999999998665443
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHh---hhhccCCCCCHHHHHhhCCccccc
Q 013936 270 DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNH---ATRVLGKFETVDAYYRHSSSANFV 346 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~y~~~~s~~~~l 346 (433)
....... ....|...++..+... ..+...+... +.-+.. ..+
T Consensus 302 ~~~~~~~-~P~my~d~LA~rlG~~-------------------~~~~~~l~~el~~~SLk~q---------------GlL 346 (411)
T PF06500_consen 302 DPEWQQR-VPDMYLDVLASRLGMA-------------------AVSDESLRGELNKFSLKTQ---------------GLL 346 (411)
T ss_dssp -HHHHTT-S-HHHHHHHHHHCT-S-------------------CE-HHHHHHHGGGGSTTTT---------------TTT
T ss_pred cHHHHhc-CCHHHHHHHHHHhCCc-------------------cCCHHHHHHHHHhcCcchh---------------ccc
Confidence 3222222 2333433333221100 0011111111 111111 133
Q ss_pred --CCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCC-eeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 347 --RNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGG-HLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 347 --~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gG-H~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
.+.++|+|.+++++|+++|.+.... ....+.+.+...++.+. |.+|.. ....+.+||+..
T Consensus 347 ~~rr~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~--------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 347 SGRRCPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ--------ALDEIYKWLEDK 409 (411)
T ss_dssp TSS-BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH--------HHHHHHHHHHHH
T ss_pred cCCCCCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH--------HHHHHHHHHHHh
Confidence 5789999999999999999886544 45566666666666555 888775 457788888764
No 65
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.71 E-value=1.6e-16 Score=158.50 Aligned_cols=232 Identities=16% Similarity=0.160 Sum_probs=133.9
Q ss_pred CCcEEEEECCCCCCChhHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCCh-HHHHHHHHHHHHhCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYP 225 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~------~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~ 225 (433)
.++.||++||+.+. .|+ ++++.+|.++||+|+++|+||+|.+..... ...+. +++.++++.+.+..+
T Consensus 187 ~~~PlLiVp~~i~k---~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g 260 (532)
T TIGR01838 187 HKTPLLIVPPWINK---YYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITG 260 (532)
T ss_pred CCCcEEEECccccc---ceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcC
Confidence 45668999998643 232 379999999999999999999997643211 12333 568899999988888
Q ss_pred CCcEEEEEechhHHHHHH----HHhhc-CCCCCceEEEEEcCCCChHHHHH---HHhhhhhHHHHHHHHHH-------HH
Q 013936 226 EVPLYAVGTSIGANILVK----YLGEN-GVNTPLVGAAAICSPWDLLICDR---FINRRLVQKCYDRVIAI-------GL 290 (433)
Q Consensus 226 ~~~i~lvG~S~GG~ia~~----~a~~~-~~~~~v~~~v~i~~p~~~~~~~~---~~~~~~~~~~~~~~~~~-------~l 290 (433)
..+++++||||||.++.. +++.. ++ +|+++++++++.|+..... ++...... ...+.+.. .+
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~~Df~~~G~l~~f~~~~~~~-~~e~~~~~~G~lpg~~m 337 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTLLDFSDPGELGVFVDEEIVA-GIERQNGGGGYLDGRQM 337 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecCcCCCCcchhhhhcCchhHH-HHHHHHHhcCCCCHHHH
Confidence 889999999999998632 44444 44 7999999999988754311 11111000 01111100 00
Q ss_pred HHHHHhhhh---hhhccCCHHHHhcCCCHHHHHHhh-----hhccC-CCC-CHHHHHhhCC----------cccccCCCc
Q 013936 291 RGFAQLHQS---TVARLADWEGITKSRSIRDFDNHA-----TRVLG-KFE-TVDAYYRHSS----------SANFVRNVS 350 (433)
Q Consensus 291 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~-~~~-~~~~y~~~~s----------~~~~l~~i~ 350 (433)
...+....+ ..... .+..........+|-.. +.... -+. .+.+.|.... ....+.+|+
T Consensus 338 ~~~F~~lrp~~l~w~~~--v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~ 415 (532)
T TIGR01838 338 AVTFSLLRENDLIWNYY--VDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVK 415 (532)
T ss_pred HHHHHhcChhhHHHHHH--HHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCC
Confidence 000000000 00000 00000000000111100 00000 000 1122233222 124678899
Q ss_pred cceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccC
Q 013936 351 VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEG 396 (433)
Q Consensus 351 ~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~ 396 (433)
+|+|+|.|++|.++|.+.... .....++.+..+++++||+.+++.
T Consensus 416 vPvLvV~G~~D~IvP~~sa~~-l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 416 VPVYIIATREDHIAPWQSAYR-GAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred CCEEEEeeCCCCcCCHHHHHH-HHHHCCCCEEEEECCCCCchHhhC
Confidence 999999999999999876554 455667888889999999998875
No 66
>PRK11071 esterase YqiA; Provisional
Probab=99.71 E-value=1.3e-16 Score=140.06 Aligned_cols=184 Identities=12% Similarity=0.065 Sum_probs=111.5
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~--~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
|+||++||++++..++....+...+.+ .+|+|+++|+||++ ++..+.++.+.++.+.++++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 679999999877665443345566655 37999999999984 3455555555555666789999
Q ss_pred EechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhc
Q 013936 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITK 312 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 312 (433)
|+||||.+++.++.++|. .+|+++++.+... .+. ..+ ...... ...+.
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~---~~~---------~~~--------~~~~~~----~~~~~--- 114 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVRPFE---LLT---------DYL--------GENENP----YTGQQ--- 114 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCCHHH---HHH---------Hhc--------CCcccc----cCCCc---
Confidence 999999999999999873 2577888766311 110 000 000000 00000
Q ss_pred CCCHHHHHHhhhhccCCCCCHHHHHhhCC--cccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCe
Q 013936 313 SRSIRDFDNHATRVLGKFETVDAYYRHSS--SANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGH 390 (433)
Q Consensus 313 ~~~~~~~d~~~~~~~~~~~~~~~y~~~~s--~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH 390 (433)
+.--.+++.... ....+. ..+|+++|+|++|.++|.+..... .+ ++...++++|+|
T Consensus 115 -----------------~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg~~De~V~~~~a~~~-~~---~~~~~~~~ggdH 172 (190)
T PRK11071 115 -----------------YVLESRHIYDLKVMQIDPLE-SPDLIWLLQQTGDEVLDYRQAVAY-YA---ACRQTVEEGGNH 172 (190)
T ss_pred -----------------EEEcHHHHHHHHhcCCccCC-ChhhEEEEEeCCCCcCCHHHHHHH-HH---hcceEEECCCCc
Confidence 000001111000 012233 678889999999999998865442 22 456668899999
Q ss_pred eeeccCCcCCCCcHHHHHHHHHH
Q 013936 391 LAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 391 ~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
.- .+ .+ ...+.+.+|++
T Consensus 173 ~f--~~--~~--~~~~~i~~fl~ 189 (190)
T PRK11071 173 AF--VG--FE--RYFNQIVDFLG 189 (190)
T ss_pred ch--hh--HH--HhHHHHHHHhc
Confidence 53 22 12 25577888864
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.70 E-value=3.1e-16 Score=160.35 Aligned_cols=133 Identities=19% Similarity=0.167 Sum_probs=104.4
Q ss_pred EEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCCh--hHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 119 FQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSA--AAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 119 ~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~--~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
+++.||.+|..+++.|.+ ..+.|+||++||++.... ..+.......++++||.|+++|+||+|.
T Consensus 1 i~~~DG~~L~~~~~~P~~--------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG--------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred CcCCCCCEEEEEEEecCC--------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecccccc
Confidence 467899999999988753 346899999999965432 0122234567888999999999999999
Q ss_pred CCCCCCCcccCCChHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH
Q 013936 197 ISLTSDCFYNGGWTEDLRRVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 197 s~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
|++...... ....+|+.++++++.++ ..+.+++++|+|+||.+++.++.+++. .++++|..++..+...
T Consensus 67 S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 67 SEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYR 136 (550)
T ss_pred CCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhH
Confidence 986533222 45679999999999876 335689999999999999999998877 7999999888777643
No 68
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.70 E-value=2.6e-16 Score=133.32 Aligned_cols=224 Identities=17% Similarity=0.170 Sum_probs=141.5
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
..+.++|+|||+.++....++..++..+.+.|+.++.+|++|.|.|++.-........++|+..+++++.... ..--++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEEEEE
Confidence 4567899999999888888999999999999999999999999999864321111234599999999998743 112378
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHh
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGIT 311 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 311 (433)
+|||-||.+++.|+.++.+ +.-+|-+++-++.... +..+.-+....+....++..+- ++..+.....
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~---I~eRlg~~~l~~ike~Gfid~~-------~rkG~y~~rv 176 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNG---INERLGEDYLERIKEQGFIDVG-------PRKGKYGYRV 176 (269)
T ss_pred EeecCccHHHHHHHHhhcC---chheEEcccccchhcc---hhhhhcccHHHHHHhCCceecC-------cccCCcCcee
Confidence 9999999999999999987 7777777777666322 1111111111111111100000 0000000000
Q ss_pred cCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCC--ccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCC
Q 013936 312 KSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNV--SVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGG 389 (433)
Q Consensus 312 ~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i--~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gG 389 (433)
...++ .+.. ...+.+.-.+| +||+|-+||.+|.++|.+.... .++..|+..+.+++++.
T Consensus 177 t~eSl--mdrL----------------ntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake-fAk~i~nH~L~iIEgAD 237 (269)
T KOG4667|consen 177 TEESL--MDRL----------------NTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE-FAKIIPNHKLEIIEGAD 237 (269)
T ss_pred cHHHH--HHHH----------------hchhhhhhcCcCccCceEEEeccCCceeechhHHH-HHHhccCCceEEecCCC
Confidence 00001 1111 11122222234 8999999999999999998765 67888999999999999
Q ss_pred eeeeccCCcCCCCcHHHHHHHHHH
Q 013936 390 HLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 390 H~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
|.-... +.-.....++|..
T Consensus 238 Hnyt~~-----q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 238 HNYTGH-----QSQLVSLGLEFIK 256 (269)
T ss_pred cCccch-----hhhHhhhcceeEE
Confidence 963322 1124455555544
No 69
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.69 E-value=6.3e-16 Score=168.36 Aligned_cols=255 Identities=13% Similarity=0.151 Sum_probs=139.4
Q ss_pred CCCcEEEEECCCCCCChhHHHHH-----HHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHH---HHh
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKH-----LAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYL---HCQ 223 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~-----~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l---~~~ 223 (433)
..+|+||++||+.++. .. |+. ++..|.++||+|+++|+ |.++.. ......++.+++..+++.+ +..
T Consensus 65 ~~~~plllvhg~~~~~-~~-~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~-~~~~~~~l~~~i~~l~~~l~~v~~~ 138 (994)
T PRK07868 65 PVGPPVLMVHPMMMSA-DM-WDVTRDDGAVGILHRAGLDPWVIDF---GSPDKV-EGGMERNLADHVVALSEAIDTVKDV 138 (994)
T ss_pred CCCCcEEEECCCCCCc-cc-eecCCcccHHHHHHHCCCEEEEEcC---CCCChh-HcCccCCHHHHHHHHHHHHHHHHHh
Confidence 3457899999996543 22 232 47889999999999995 444322 1112234445554444444 333
Q ss_pred CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHH--HHH----hh--hhh-HHHHH-----H-HHHH
Q 013936 224 YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD--RFI----NR--RLV-QKCYD-----R-VIAI 288 (433)
Q Consensus 224 ~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~--~~~----~~--~~~-~~~~~-----~-~~~~ 288 (433)
. ..+++++||||||.+++.+++.++++ +|+++|++++|.|..... ... .. .+. ..+.. . ....
T Consensus 139 ~-~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 216 (994)
T PRK07868 139 T-GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMART 216 (994)
T ss_pred h-CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHH
Confidence 3 45799999999999999998865432 699999999987653210 000 00 000 00000 0 0000
Q ss_pred HH---H--HHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhh-ccCC--CC-CHHHHHhhCCc----------ccccCCC
Q 013936 289 GL---R--GFAQLHQSTVARLADWEGITKSRSIRDFDNHATR-VLGK--FE-TVDAYYRHSSS----------ANFVRNV 349 (433)
Q Consensus 289 ~l---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~--~~-~~~~y~~~~s~----------~~~l~~i 349 (433)
.. + .........+....+.+........+++...... ...+ +. .+.+++..... ...+.+|
T Consensus 217 ~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i 296 (994)
T PRK07868 217 GFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADI 296 (994)
T ss_pred HHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhC
Confidence 00 0 0001011111111111111111111111110000 0000 01 11223221111 1257899
Q ss_pred ccceEEEeeCCCCcCCCCCCChhHHhcCCCeEE-EEcCCCCeeeeccCCc-CCCCcHHHHHHHHHHHhcc
Q 013936 350 SVPLLCISTLDDPVCTREAIPWDECRANEKIIL-ATTRHGGHLAFYEGIT-AKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l-~~~~~gGH~~~~e~~~-~~~~w~~~~v~~Fl~~~~~ 417 (433)
++|+|+|+|++|+++|++.... ..+..++.++ .+++++||++++-|.. ++..| ..+.+||++-..
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~w--p~i~~wl~~~~~ 363 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTW--PTVADWVKWLEG 363 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhhhhC--hHHHHHHHHhcc
Confidence 9999999999999999886655 4566788887 6788999999988743 34446 889999997554
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.67 E-value=1.4e-16 Score=143.23 Aligned_cols=197 Identities=21% Similarity=0.225 Sum_probs=124.8
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCC----CCcccCCChHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHh
Q 013936 173 KHLAFKMAGHGWNVVVSNHRGLGGISLTS----DCFYNGGWTEDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 173 ~~~~~~l~~~G~~vv~~d~rG~G~s~~~~----~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~ 246 (433)
......|+++||.|+.+|+||.++....- .........+|+.++++++.++.. ..+|.++|+|+||.+++..+.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 34567888999999999999987532110 011111235799999999988753 468999999999999999999
Q ss_pred hcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhc
Q 013936 247 ENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRV 326 (433)
Q Consensus 247 ~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 326 (433)
.+++ +++++++.++..+.......... +... . +...
T Consensus 84 ~~~~--~f~a~v~~~g~~d~~~~~~~~~~------~~~~---~-----------------------------~~~~---- 119 (213)
T PF00326_consen 84 QHPD--RFKAAVAGAGVSDLFSYYGTTDI------YTKA---E-----------------------------YLEY---- 119 (213)
T ss_dssp HTCC--GSSEEEEESE-SSTTCSBHHTCC------HHHG---H-----------------------------HHHH----
T ss_pred ccce--eeeeeeccceecchhcccccccc------cccc---c-----------------------------cccc----
Confidence 8888 79999999887776332111000 0000 0 0000
Q ss_pred cCCCCCHHHHHhhCCcccccCC--CccceEEEeeCCCCcCCCCCCCh---hHHhcCCCeEEEEcCCCCeeeeccCCcCCC
Q 013936 327 LGKFETVDAYYRHSSSANFVRN--VSVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKS 401 (433)
Q Consensus 327 ~~~~~~~~~y~~~~s~~~~l~~--i~~P~Lii~g~dD~ivp~~~~~~---~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~ 401 (433)
.......+.|+..++...+.+ +++|+|++||++|+.||.+.... .+.+...++++.+++++|| ++... ...
T Consensus 120 -~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~~--~~~ 195 (213)
T PF00326_consen 120 -GDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGNP--ENR 195 (213)
T ss_dssp -SSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTSH--HHH
T ss_pred -CccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCCc--hhH
Confidence 000012233344444555566 89999999999999999874332 2345667799999999999 33321 111
Q ss_pred CcHHHHHHHHHHHhcc
Q 013936 402 LWWVRAVNVFLDALNT 417 (433)
Q Consensus 402 ~w~~~~v~~Fl~~~~~ 417 (433)
.-+.+.+.+||+..+.
T Consensus 196 ~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 196 RDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 2356789999987654
No 71
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.66 E-value=2.2e-15 Score=125.96 Aligned_cols=177 Identities=21% Similarity=0.243 Sum_probs=133.1
Q ss_pred CCCCcEEEEECC---CCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCC
Q 013936 151 CEKNPIVVVIPG---LTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (433)
Q Consensus 151 ~~~~p~vvllHG---~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 227 (433)
.+.+|+.|+||- .+|+....-+..++..|.++||.|+.+|+||-|+|.++- ..-.|..+|..++++|++.++|+.
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f--D~GiGE~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF--DNGIGELEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc--cCCcchHHHHHHHHHHHHhhCCCc
Confidence 467899999996 335555566678889999999999999999999998743 233567899999999999999998
Q ss_pred cE-EEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCC
Q 013936 228 PL-YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLAD 306 (433)
Q Consensus 228 ~i-~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 306 (433)
+. .+.|+|+||.|++..|.+.++ ....+++.++.+. |+.
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~---------------~df---------------------- 142 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINA---------------YDF---------------------- 142 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCc---------------hhh----------------------
Confidence 87 788999999999999999887 6666766665441 000
Q ss_pred HHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcC
Q 013936 307 WEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (433)
Q Consensus 307 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~ 386 (433)
..+.-..+|.++|+|+.|.+++....-. ........++.++
T Consensus 143 -------------------------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~--~~~~~~~~~i~i~ 183 (210)
T COG2945 143 -------------------------------------SFLAPCPSPGLVIQGDADDVVDLVAVLK--WQESIKITVITIP 183 (210)
T ss_pred -------------------------------------hhccCCCCCceeEecChhhhhcHHHHHH--hhcCCCCceEEec
Confidence 1223457899999999998887664322 2233667788889
Q ss_pred CCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 387 HGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 387 ~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
+++|+-+-. -.-+.+.+.+|+.
T Consensus 184 ~a~HFF~gK-----l~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFHGK-----LIELRDTIADFLE 205 (210)
T ss_pred CCCceeccc-----HHHHHHHHHHHhh
Confidence 999963321 1136788888885
No 72
>PLN00021 chlorophyllase
Probab=99.64 E-value=9.6e-15 Score=137.65 Aligned_cols=187 Identities=17% Similarity=0.141 Sum_probs=123.0
Q ss_pred CEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCc
Q 013936 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCF 204 (433)
Q Consensus 125 ~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~ 204 (433)
..+.++++.|.. ....|+||++||+.++ ...| ..+++.++++||.|+++|++|++...
T Consensus 37 ~~~p~~v~~P~~--------------~g~~PvVv~lHG~~~~-~~~y-~~l~~~Las~G~~VvapD~~g~~~~~------ 94 (313)
T PLN00021 37 PPKPLLVATPSE--------------AGTYPVLLFLHGYLLY-NSFY-SQLLQHIASHGFIVVAPQLYTLAGPD------ 94 (313)
T ss_pred CCceEEEEeCCC--------------CCCCCEEEEECCCCCC-cccH-HHHHHHHHhCCCEEEEecCCCcCCCC------
Confidence 456667776643 3567999999999664 4444 78999999999999999999965421
Q ss_pred ccCCChHHHHHHHHHHHHhC----------CCCcEEEEEechhHHHHHHHHhhcCCC---CCceEEEEEcCCCChHHHHH
Q 013936 205 YNGGWTEDLRRVIDYLHCQY----------PEVPLYAVGTSIGANILVKYLGENGVN---TPLVGAAAICSPWDLLICDR 271 (433)
Q Consensus 205 ~~~~~~~Dl~~~i~~l~~~~----------~~~~i~lvG~S~GG~ia~~~a~~~~~~---~~v~~~v~i~~p~~~~~~~~ 271 (433)
.....+|..++++++.+.. ...+++++||||||.+++.++.++++. .+++++|.+++........
T Consensus 95 -~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~- 172 (313)
T PLN00021 95 -GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK- 172 (313)
T ss_pred -chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc-
Confidence 1123466777777776521 125799999999999999999887642 2588888886542220000
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCcc
Q 013936 272 FINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSV 351 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~ 351 (433)
.. ...+ .+ + ....-++.+
T Consensus 173 ---~~------------------------------------~p~i------l~------------~-----~~~s~~~~~ 190 (313)
T PLN00021 173 ---QT------------------------------------PPPV------LT------------Y-----APHSFNLDI 190 (313)
T ss_pred ---CC------------------------------------CCcc------cc------------c-----CcccccCCC
Confidence 00 0000 00 0 011124789
Q ss_pred ceEEEeeCCCC-----cCC----CCCCCh-hHHhcCCCeEEEEcCCCCeeeeccCC
Q 013936 352 PLLCISTLDDP-----VCT----REAIPW-DECRANEKIILATTRHGGHLAFYEGI 397 (433)
Q Consensus 352 P~Lii~g~dD~-----ivp----~~~~~~-~~~~~~~~~~l~~~~~gGH~~~~e~~ 397 (433)
|+|++.+..|+ ++| ...-.. ...+..+++.+.+.+++||+.++|+.
T Consensus 191 P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 191 PVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 99999999763 333 332212 23456678899999999999998864
No 73
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.62 E-value=1.5e-14 Score=127.63 Aligned_cols=249 Identities=16% Similarity=0.182 Sum_probs=132.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCcc-cCCChHHHHHHHHHHHHhCCCCc
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFY-NGGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~rG~G~s~~~~~~~~-~~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
....|+++++||. |.|.-.| ..++..+..+ ..+|+++|+||||.+....+... ...+..|+-++++++-... ..+
T Consensus 71 ~t~gpil~l~HG~-G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~ 147 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGEL-PPQ 147 (343)
T ss_pred CCCccEEEEeecC-cccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccC-CCc
Confidence 4567999999997 4444444 6788877653 57889999999999987655433 3456688888888776544 346
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHH--HHHHHHHHHhhh-hhhhccC
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVI--AIGLRGFAQLHQ-STVARLA 305 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~-~~~~~~~ 305 (433)
|++|||||||.|+...|...--. .+.|++.|.. .....+-....+..+..... ...+.+.+..+. ....+..
T Consensus 148 iilVGHSmGGaIav~~a~~k~lp-sl~Gl~viDV----VEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~ 222 (343)
T KOG2564|consen 148 IILVGHSMGGAIAVHTAASKTLP-SLAGLVVIDV----VEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNR 222 (343)
T ss_pred eEEEeccccchhhhhhhhhhhch-hhhceEEEEE----echHHHHHHHHHHHHHhcCCccccchhhHHHHHhcccccccc
Confidence 99999999999998777654322 3888888743 22111111000011110000 000011111000 0000011
Q ss_pred CHHHHhcCCCHHHHHH--hhhhccCCCCCHHHHHhh--CCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeE
Q 013936 306 DWEGITKSRSIRDFDN--HATRVLGKFETVDAYYRH--SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKII 381 (433)
Q Consensus 306 ~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~y~~~--~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~ 381 (433)
+-..+.....+.+-++ .++.... ....+.||.. ....+..-+..+|-|+|-+..|.+-- .+. .-+--...+
T Consensus 223 ~SArVsmP~~~~~~~eGh~yvwrtd-L~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDk--dLt--iGQMQGk~Q 297 (343)
T KOG2564|consen 223 DSARVSMPSQLKQCEEGHCYVWRTD-LEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDK--DLT--IGQMQGKFQ 297 (343)
T ss_pred ccceEecchheeeccCCCcEEEEee-ccccchhHHHHHhhhhhHhhCCCccceeEEecccccCc--cee--eeeecccee
Confidence 1000000001111111 1111111 1222333321 11123344678888888888776521 111 122345678
Q ss_pred EEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhc
Q 013936 382 LATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (433)
Q Consensus 382 l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~ 416 (433)
+.+++..||+..-++ |.+ ++..+..|.....
T Consensus 298 ~~vL~~~GH~v~ED~--P~k--va~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 298 LQVLPLCGHFVHEDS--PHK--VAECLCVFWIRNR 328 (343)
T ss_pred eeeecccCceeccCC--cch--HHHHHHHHHhhhc
Confidence 999999999887764 555 7788888876544
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.62 E-value=3.7e-14 Score=132.78 Aligned_cols=207 Identities=15% Similarity=0.167 Sum_probs=123.3
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHH--HHHHHHHhCCceEEEEeCCCCCC-CCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNHRGLGG-ISL 199 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~--~~~~~l~~~G~~vv~~d~rG~G~-s~~ 199 (433)
-|..+.+..+.|+.. .+.+.|+|+++||+.++. ..+.. .+...+...|+.|+++|..++|. .++
T Consensus 28 l~~~~~~~vy~P~~~------------~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 28 LGCSMTFSVYFPPAS------------DSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred cCCceEEEEEcCCcc------------cCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 466777777777531 235689999999997654 33322 23455667799999999877661 110
Q ss_pred CC--------CCccc-------------CCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEE
Q 013936 200 TS--------DCFYN-------------GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA 258 (433)
Q Consensus 200 ~~--------~~~~~-------------~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v 258 (433)
.. ...|. .-..+++...++.........+++++|+||||..++.++.++|+ .+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEE
Confidence 00 00010 00124444444443333345679999999999999999999988 799999
Q ss_pred EEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHh
Q 013936 259 AICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYR 338 (433)
Q Consensus 259 ~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~ 338 (433)
++++..+..... +. ...... +. . . ...++.+ +.
T Consensus 173 ~~~~~~~~~~~~-~~-----~~~~~~--------~~-------g---~--------~~~~~~~---------------~d 205 (283)
T PLN02442 173 AFAPIANPINCP-WG-----QKAFTN--------YL-------G---S--------DKADWEE---------------YD 205 (283)
T ss_pred EECCccCcccCc-hh-----hHHHHH--------Hc-------C---C--------ChhhHHH---------------cC
Confidence 998876642110 00 000000 00 0 0 0000100 11
Q ss_pred hCCcccccCCCccceEEEeeCCCCcCCCCC----CChhHHhcCCCeEEEEcCCCCee
Q 013936 339 HSSSANFVRNVSVPLLCISTLDDPVCTREA----IPWDECRANEKIILATTRHGGHL 391 (433)
Q Consensus 339 ~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~----~~~~~~~~~~~~~l~~~~~gGH~ 391 (433)
..+....+.+.++|+++++|++|++++... ......+...++++.++++++|.
T Consensus 206 ~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 206 ATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred hhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 122233455678999999999999998632 11223455667999999999994
No 75
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.59 E-value=3.3e-15 Score=128.15 Aligned_cols=261 Identities=18% Similarity=0.221 Sum_probs=145.3
Q ss_pred EEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 117 HLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 117 ~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
..+..+||..+..+.+..+. +.+--+++.|-+|- ...|++.++..+.++||.|..+|+||.|.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~----------------~~~g~~~va~a~Gv-~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG----------------KASGRLVVAGATGV-GQYFYRRFAAAAAKAGFEVLTFDYRGIGQ 70 (281)
T ss_pred cccccCCCccCccccccCCC----------------CCCCcEEecccCCc-chhHhHHHHHHhhccCceEEEEecccccC
Confidence 44778999999998775432 22223445554454 34556999999999999999999999999
Q ss_pred CCCCCCCcccC---CCh-HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHH
Q 013936 197 ISLTSDCFYNG---GWT-EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRF 272 (433)
Q Consensus 197 s~~~~~~~~~~---~~~-~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~ 272 (433)
|..++.+.... +|. .|+.++++.+++..+..|.+.||||+||.+.. ++++++ +..+....+...........
T Consensus 71 S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~---k~~a~~vfG~gagwsg~m~~ 146 (281)
T COG4757 71 SRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP---KYAAFAVFGSGAGWSGWMGL 146 (281)
T ss_pred CCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc---ccceeeEeccccccccchhh
Confidence 98766542222 333 69999999999988999999999999999865 334444 34444444432221110000
Q ss_pred HhhhhhHHHHHHH--HHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCc
Q 013936 273 INRRLVQKCYDRV--IAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVS 350 (433)
Q Consensus 273 ~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~ 350 (433)
.++.....+++-. ....+++++... ......-......++|.+....+..-+.+-..- ...+....++
T Consensus 147 ~~~l~~~~l~~lv~p~lt~w~g~~p~~------l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~----~~~q~yaaVr 216 (281)
T COG4757 147 RERLGAVLLWNLVGPPLTFWKGYMPKD------LLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMR----NYRQVYAAVR 216 (281)
T ss_pred hhcccceeeccccccchhhccccCcHh------hcCCCccCcchHHHHHHHHhcCccccccChhHh----HHHHHHHHhc
Confidence 0000000000000 000011111000 000001122344556655544332222211100 0123446889
Q ss_pred cceEEEeeCCCCcCCCCCCChhHHhcCCC--eEEEEcCC----CCeeeeccCCcCCCCcHHHHHHHHH
Q 013936 351 VPLLCISTLDDPVCTREAIPWDECRANEK--IILATTRH----GGHLAFYEGITAKSLWWVRAVNVFL 412 (433)
Q Consensus 351 ~P~Lii~g~dD~ivp~~~~~~~~~~~~~~--~~l~~~~~----gGH~~~~e~~~~~~~w~~~~v~~Fl 412 (433)
+|+.++...||+.+|+.+... .....+| .+...++. -||++++.... +..| +.+++|+
T Consensus 217 tPi~~~~~~DD~w~P~As~d~-f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~-Ealw--k~~L~w~ 280 (281)
T COG4757 217 TPITFSRALDDPWAPPASRDA-FASFYRNAPLEMRDLPRAEGPLGHMGYFREPF-EALW--KEMLGWF 280 (281)
T ss_pred CceeeeccCCCCcCCHHHHHH-HHHhhhcCcccceecCcccCcccchhhhccch-HHHH--HHHHHhh
Confidence 999999999999999876654 3333333 34444443 39999987421 3323 5555553
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.59 E-value=4.6e-14 Score=128.17 Aligned_cols=179 Identities=12% Similarity=0.020 Sum_probs=112.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCc-------ccCCCh-------HHHHHH
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCF-------YNGGWT-------EDLRRV 216 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~-------~~~~~~-------~Dl~~~ 216 (433)
.+.+|+||++||++++ ... +..+++.+.+.++.+.+++.+|........... ...... +++.+.
T Consensus 13 ~~~~~~vIlLHG~G~~-~~~-~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 13 KPAQQLLLLFHGVGDN-PVA-MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCcEEEEEeCCCCC-hHH-HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 4567899999999654 443 478999998877777777778754321110100 000111 123344
Q ss_pred HHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 013936 217 IDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFA 294 (433)
Q Consensus 217 i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 294 (433)
++++..+. +..+++++|||+||.+++.++.+.++ .+.+++++++.+..
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~---------------------------- 140 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYAS---------------------------- 140 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEecccccc----------------------------
Confidence 45554453 24579999999999999998888776 46666665431100
Q ss_pred HhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCCh---
Q 013936 295 QLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW--- 371 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~--- 371 (433)
.. .....++|++++||++|+++|.+....
T Consensus 141 ---------~~---------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~ 172 (232)
T PRK11460 141 ---------LP---------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQE 172 (232)
T ss_pred ---------cc---------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHH
Confidence 00 001236899999999999999875433
Q ss_pred hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 372 DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 372 ~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
.+.....++++..++++||..--+ ..+.+.+||.+...
T Consensus 173 ~L~~~g~~~~~~~~~~~gH~i~~~--------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 173 ALISLGGDVTLDIVEDLGHAIDPR--------LMQFALDRLRYTVP 210 (232)
T ss_pred HHHHCCCCeEEEEECCCCCCCCHH--------HHHHHHHHHHHHcc
Confidence 123345678899999999964322 34566777766553
No 77
>PRK10115 protease 2; Provisional
Probab=99.58 E-value=4.1e-14 Score=147.17 Aligned_cols=227 Identities=15% Similarity=0.109 Sum_probs=153.0
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
...++..++..||.+|.+.++.+++.. .+.+.|+||++||..+.+....+......+.++||.|+..|.
T Consensus 414 ~~~e~v~~~s~DG~~Ip~~l~~~~~~~-----------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~ 482 (686)
T PRK10115 414 YRSEHLWITARDGVEVPVSLVYHRKHF-----------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHV 482 (686)
T ss_pred cEEEEEEEECCCCCEEEEEEEEECCCC-----------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEc
Confidence 345666788999999999777654311 234569999999988776555556667788999999999999
Q ss_pred CCCCCCCCCC---C-CcccCCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 192 RGLGGISLTS---D-CFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 192 rG~G~s~~~~---~-~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
||-|+-...- . ........+|+.++++++.++. ...++.+.|.|.||.++...+.+.|+ .++++|+..+..|
T Consensus 483 RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D 560 (686)
T PRK10115 483 RGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVD 560 (686)
T ss_pred CCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchh
Confidence 9966532110 0 1111234589999999998763 24689999999999999999999998 7999998888766
Q ss_pred hHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccc
Q 013936 266 LLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANF 345 (433)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~ 345 (433)
+... +. +. . + .....++.+. ..+. -....+|+...|+...
T Consensus 561 ~~~~---~~--------~~----~-----------~-----------p~~~~~~~e~-G~p~--~~~~~~~l~~~SP~~~ 600 (686)
T PRK10115 561 VVTT---ML--------DE----S-----------I-----------PLTTGEFEEW-GNPQ--DPQYYEYMKSYSPYDN 600 (686)
T ss_pred Hhhh---cc--------cC----C-----------C-----------CCChhHHHHh-CCCC--CHHHHHHHHHcCchhc
Confidence 5311 00 00 0 0 0000011111 0000 0112456777899999
Q ss_pred cCCCccc-eEEEeeCCCCcCCCCCCChh---HHhcCCCeEEEEc---CCCCee
Q 013936 346 VRNVSVP-LLCISTLDDPVCTREAIPWD---ECRANEKIILATT---RHGGHL 391 (433)
Q Consensus 346 l~~i~~P-~Lii~g~dD~ivp~~~~~~~---~~~~~~~~~l~~~---~~gGH~ 391 (433)
+.+++.| +|+++|.+|+-||+....+. +.....+.+++++ +++||.
T Consensus 601 v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 601 VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred cCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 9999999 56779999999998754332 2233455666666 899996
No 78
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.58 E-value=7.3e-14 Score=133.84 Aligned_cols=289 Identities=20% Similarity=0.220 Sum_probs=176.2
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHH----HHHHHHHHhCCceE
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI----KHLAFKMAGHGWNV 186 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~----~~~~~~l~~~G~~v 186 (433)
..+.+.+.+++.||..+.+...... ..++|+|++.||+.++|..+.. +.++-.|+++||+|
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~---------------~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDV 109 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG---------------KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDV 109 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC---------------CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCce
Confidence 4678999999999998888765432 2688999999999887755432 35677889999999
Q ss_pred EEEeCCCCCCCCCC-------CCCcccCCCh----HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCC-CCc
Q 013936 187 VVSNHRGLGGISLT-------SDCFYNGGWT----EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN-TPL 254 (433)
Q Consensus 187 v~~d~rG~G~s~~~-------~~~~~~~~~~----~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~-~~v 254 (433)
..-|.||---|... ..+++...|- .|+-++|+++.......+++.||||.|+......+.+.|+- .+|
T Consensus 110 WLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 110 WLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred eeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhh
Confidence 99999995444221 1223333333 59999999999988888999999999999999999888652 379
Q ss_pred eEEEEEcCCCChHHHHHHHhhhhh---------HHHH-----------HHHHHHHHHH---HHH-hhhhhhhccC--C--
Q 013936 255 VGAAAICSPWDLLICDRFINRRLV---------QKCY-----------DRVIAIGLRG---FAQ-LHQSTVARLA--D-- 306 (433)
Q Consensus 255 ~~~v~i~~p~~~~~~~~~~~~~~~---------~~~~-----------~~~~~~~l~~---~~~-~~~~~~~~~~--~-- 306 (433)
+.+++++|............+... ..++ .+.+...+.. ... .-...+.... +
T Consensus 190 ~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~ 269 (403)
T KOG2624|consen 190 KSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSN 269 (403)
T ss_pred heeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchH
Confidence 999999886633211111111000 0000 0000000000 000 0000000000 0
Q ss_pred -HH---------HHhcCCCHHHHHHhhhh------ccCCCC---CHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCC
Q 013936 307 -WE---------GITKSRSIRDFDNHATR------VLGKFE---TVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTRE 367 (433)
Q Consensus 307 -~~---------~~~~~~~~~~~d~~~~~------~~~~~~---~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~ 367 (433)
++ ......+.+........ +..++. +...|-....+...+.+|++|+.+.+|++|-++.++
T Consensus 270 ~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~ 349 (403)
T KOG2624|consen 270 NWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPE 349 (403)
T ss_pred hhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHH
Confidence 00 00112233333322211 111222 333444445566788999999999999999999988
Q ss_pred CCChhHHhcCCCeEEE---EcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhc
Q 013936 368 AIPWDECRANEKIILA---TTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (433)
Q Consensus 368 ~~~~~~~~~~~~~~l~---~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~ 416 (433)
.+.... ...++.... -+++=.|+-|+=|.... ..+.+.|++.++...
T Consensus 350 DV~~~~-~~~~~~~~~~~~~~~~ynHlDFi~g~da~-~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 350 DVLILL-LVLPNSVIKYIVPIPEYNHLDFIWGLDAK-EEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHH-HhcccccccccccCCCccceeeeeccCcH-HHHHHHHHHHHHhhh
Confidence 776533 333333332 27888999998875333 256788888888665
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.56 E-value=1.5e-13 Score=123.30 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=81.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHH--HHHHHHHhCCceEEEEeCCCCCCCCCCC----C--CcccCCChHHHHHHHHHHHH
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNHRGLGGISLTS----D--CFYNGGWTEDLRRVIDYLHC 222 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~--~~~~~l~~~G~~vv~~d~rG~G~s~~~~----~--~~~~~~~~~Dl~~~i~~l~~ 222 (433)
+++.|+||++||.+++ .+.+.. .+...+.+.||.|+++|.||++.+.... + .....+...|+.++++++.+
T Consensus 10 ~~~~P~vv~lHG~~~~-~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQT-ASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCC-HHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 3468999999998654 343421 3555666689999999999987543210 0 01112346789999999988
Q ss_pred hCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 223 QYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 223 ~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
+++ ..+++++||||||.+++.++.++++ .+.+++.++++.
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 764 3589999999999999999999988 788888888654
No 80
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.56 E-value=2.6e-13 Score=126.66 Aligned_cols=130 Identities=18% Similarity=0.197 Sum_probs=80.6
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHH-HhCCceEEEEeC--CCCCCCCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKM-AGHGWNVVVSNH--RGLGGISL 199 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l-~~~G~~vv~~d~--rG~G~s~~ 199 (433)
.|....+.++.|+.. ...+.|+|+++||++++............+ .+.|+.|+++|. ||+|.+..
T Consensus 23 ~~~~~~~~v~~P~~~------------~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA------------AAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred cCCceEEEEEcCCCc------------cCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 356666777776531 123579999999997654333222223334 457999999998 66553321
Q ss_pred CC-------CCcc----------cCCChHHH-HHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEE
Q 013936 200 TS-------DCFY----------NGGWTEDL-RRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAA 259 (433)
Q Consensus 200 ~~-------~~~~----------~~~~~~Dl-~~~i~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~ 259 (433)
.. ...| ...+.+.+ .++...+...++ ..+++++||||||.+++.++.++|+ .++++++
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~~ 168 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVSA 168 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEEE
Confidence 00 0000 00112232 233334444433 4579999999999999999999998 7899998
Q ss_pred EcCCCCh
Q 013936 260 ICSPWDL 266 (433)
Q Consensus 260 i~~p~~~ 266 (433)
+++..+.
T Consensus 169 ~~~~~~~ 175 (275)
T TIGR02821 169 FAPIVAP 175 (275)
T ss_pred ECCccCc
Confidence 8876553
No 81
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.54 E-value=5.4e-14 Score=132.74 Aligned_cols=244 Identities=20% Similarity=0.134 Sum_probs=134.1
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.+.+....+...||..|...++.|.+ .+.+.|.||.+||.++.+.. + ...+ .++.+||.|+.+|
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~-------------~~~~~Pavv~~hGyg~~~~~-~-~~~~-~~a~~G~~vl~~d 116 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKN-------------AKGKLPAVVQFHGYGGRSGD-P-FDLL-PWAAAGYAVLAMD 116 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES--------------SSSSEEEEEEE--TT--GGG-H-HHHH-HHHHTT-EEEEE-
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCC-------------CCCCcCEEEEecCCCCCCCC-c-cccc-ccccCCeEEEEec
Confidence 44555667788899999999888763 24678999999999765433 3 2233 3567899999999
Q ss_pred CCCCCCCC-CCC------CCcc-cC------------CChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhc
Q 013936 191 HRGLGGIS-LTS------DCFY-NG------------GWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 191 ~rG~G~s~-~~~------~~~~-~~------------~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
.||+|+.. ... ...+ .. +...|...+++++.+.- ..++|.+.|.|+||.+++..|+-.
T Consensus 117 ~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd 196 (320)
T PF05448_consen 117 VRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD 196 (320)
T ss_dssp -TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC
Confidence 99999422 110 0000 00 12368888999998753 256899999999999999999887
Q ss_pred CCCCCceEEEEEcCCC-ChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhcc
Q 013936 249 GVNTPLVGAAAICSPW-DLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL 327 (433)
Q Consensus 249 ~~~~~v~~~v~i~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 327 (433)
+. |++++...+.+ |.......-... .-| ..+..+++...... ....+.-+.
T Consensus 197 ~r---v~~~~~~vP~l~d~~~~~~~~~~~---~~y-----~~~~~~~~~~d~~~------------~~~~~v~~~----- 248 (320)
T PF05448_consen 197 PR---VKAAAADVPFLCDFRRALELRADE---GPY-----PEIRRYFRWRDPHH------------EREPEVFET----- 248 (320)
T ss_dssp ST----SEEEEESESSSSHHHHHHHT--S---TTT-----HHHHHHHHHHSCTH------------CHHHHHHHH-----
T ss_pred cc---ccEEEecCCCccchhhhhhcCCcc---ccH-----HHHHHHHhccCCCc------------ccHHHHHHH-----
Confidence 64 99988886643 332111110000 000 11112221000000 000000000
Q ss_pred CCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHH
Q 013936 328 GKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRA 407 (433)
Q Consensus 328 ~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~ 407 (433)
..| .+..+..++|++|+++-.|-.|++||+...-..........++.+++.+||-..-+ +-.+.
T Consensus 249 ------L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~-------~~~~~ 312 (320)
T PF05448_consen 249 ------LSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE-------FQEDK 312 (320)
T ss_dssp ------HHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH-------HHHHH
T ss_pred ------Hhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh-------HHHHH
Confidence 011 11234456899999999999999999975433222334468999999999943222 22577
Q ss_pred HHHHHHH
Q 013936 408 VNVFLDA 414 (433)
Q Consensus 408 v~~Fl~~ 414 (433)
..+||.+
T Consensus 313 ~~~~l~~ 319 (320)
T PF05448_consen 313 QLNFLKE 319 (320)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 8888864
No 82
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.54 E-value=9.1e-15 Score=136.33 Aligned_cols=130 Identities=20% Similarity=0.138 Sum_probs=92.0
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHH--HH------HHHHhCCceEEEEeCCCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKH--LA------FKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~--~~------~~l~~~G~~vv~~d~rG~ 194 (433)
||.+|+.|.+.| +. ..+.+.|+||..|+...+.....-.. .. ..++++||.||+.|.||.
T Consensus 1 DGv~L~adv~~P-~~-----------~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~ 68 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-----------DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGT 68 (272)
T ss_dssp TS-EEEEEEEEE--------------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS
T ss_pred CCCEEEEEEEec-CC-----------CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCccc
Confidence 899999999998 21 13567899999999864321111011 11 128899999999999999
Q ss_pred CCCCCCCCCcccCCChHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH
Q 013936 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 195 G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
|.|++..... .....+|..++|+++..+ | +.+|.++|.|++|...+..|++.+. .+++++..++..+...
T Consensus 69 g~S~G~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 69 GGSEGEFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TTS-S-B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred ccCCCccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 9998764332 333558999999999887 5 4589999999999999999887666 6999999988777654
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.52 E-value=1.1e-13 Score=136.69 Aligned_cols=109 Identities=13% Similarity=0.121 Sum_probs=84.9
Q ss_pred CCcEEEEECCCCCCChhHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPE 226 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~------~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~ 226 (433)
.++.||++|.+- ...|+ ++++++|.++||+|+++|+++-+.... ......+.+.+.++++.+++..+.
T Consensus 214 ~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 214 HARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCC
Confidence 344589999985 23443 579999999999999999998665421 111233456889999999998888
Q ss_pred CcEEEEEechhHHHHHH----HHhhcCCCCCceEEEEEcCCCChHH
Q 013936 227 VPLYAVGTSIGANILVK----YLGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~----~a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
.++.++|+||||.+++. |++.++++ +|++++++.+|.|...
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~-~V~sltllatplDf~~ 332 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLR-KVNSLTYLVSLLDSTM 332 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCC-ceeeEEeeecccccCC
Confidence 89999999999999997 77777642 6999999999998753
No 84
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=1.9e-13 Score=120.23 Aligned_cols=242 Identities=19% Similarity=0.157 Sum_probs=150.7
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
++.-+.+++..+|..|..+...|.. .+...|.||-.||.+|+... +..+... +..||.|+++|-
T Consensus 54 ve~ydvTf~g~~g~rI~gwlvlP~~-------------~~~~~P~vV~fhGY~g~~g~--~~~~l~w-a~~Gyavf~Mdv 117 (321)
T COG3458 54 VEVYDVTFTGYGGARIKGWLVLPRH-------------EKGKLPAVVQFHGYGGRGGE--WHDMLHW-AVAGYAVFVMDV 117 (321)
T ss_pred eEEEEEEEeccCCceEEEEEEeecc-------------cCCccceEEEEeeccCCCCC--ccccccc-cccceeEEEEec
Confidence 4444567778899999998887754 34678999999999876533 2344443 356999999999
Q ss_pred CCCCCCCCCCC---C------------------cccCCChHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHhhc
Q 013936 192 RGLGGISLTSD---C------------------FYNGGWTEDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 192 rG~G~s~~~~~---~------------------~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
||.|.+...+. . .+..+...|+..+++.+..-.+ ..+|.+.|.|.||.+++..++-.
T Consensus 118 RGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~ 197 (321)
T COG3458 118 RGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD 197 (321)
T ss_pred ccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC
Confidence 99998733111 0 1111233688888888876543 56899999999999999888777
Q ss_pred CCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccC
Q 013936 249 GVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLG 328 (433)
Q Consensus 249 ~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 328 (433)
+. +++++++-|-+.-. .+.++- ....-| ..+..+.+.|.+. +..-.+++.-||
T Consensus 198 ~r---ik~~~~~~Pfl~df--~r~i~~-~~~~~y-----dei~~y~k~h~~~--------e~~v~~TL~yfD-------- 250 (321)
T COG3458 198 PR---IKAVVADYPFLSDF--PRAIEL-ATEGPY-----DEIQTYFKRHDPK--------EAEVFETLSYFD-------- 250 (321)
T ss_pred hh---hhcccccccccccc--hhheee-cccCcH-----HHHHHHHHhcCch--------HHHHHHHHhhhh--------
Confidence 64 88888775533221 011110 001111 2233444444321 001111222222
Q ss_pred CCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHH
Q 013936 329 KFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAV 408 (433)
Q Consensus 329 ~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v 408 (433)
+.+...+|++|+|+.-|..|++||+...-...........+.+++.-+|.+.-. .-++.+
T Consensus 251 -------------~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p~-------~~~~~~ 310 (321)
T COG3458 251 -------------IVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGPG-------FQSRQQ 310 (321)
T ss_pred -------------hhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCcc-------hhHHHH
Confidence 223446899999999999999999986433223334456677777767854332 345778
Q ss_pred HHHHHHhc
Q 013936 409 NVFLDALN 416 (433)
Q Consensus 409 ~~Fl~~~~ 416 (433)
..|++.+.
T Consensus 311 ~~~l~~l~ 318 (321)
T COG3458 311 VHFLKILF 318 (321)
T ss_pred HHHHHhhc
Confidence 88887653
No 85
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.50 E-value=4.8e-13 Score=122.26 Aligned_cols=102 Identities=17% Similarity=0.280 Sum_probs=69.5
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhC--CceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGH--GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~--G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
.|.++++||+.++... | ......+... .|+++++|+||||.|. . .......+.+|+..+++ .....++++
T Consensus 21 ~~~i~~~hg~~~~~~~-~-~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~-~~~~~~~~~~~~~~~~~----~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-W-RPVFKVLPALAARYRVIAPDLRGHGRSD-P-AGYSLSAYADDLAALLD----ALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCCchhh-h-HHHHHHhhccccceEEEEecccCCCCCC-c-ccccHHHHHHHHHHHHH----HhCCCceEE
Confidence 4589999999876443 3 2222222221 1999999999999987 1 10011111344444444 444445999
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
+||||||.+++.++.++|+ ++.++++++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999998 7999999987643
No 86
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.49 E-value=1.2e-12 Score=125.86 Aligned_cols=248 Identities=13% Similarity=0.190 Sum_probs=139.7
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
|.||++.-+.|. ...+.+++++.|.+ |+.|++.|+.--+..+.....+...++++-+.++++++ +.+++++|+
T Consensus 103 ~pvLiV~Pl~g~-~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~-----G~~v~l~Gv 175 (406)
T TIGR01849 103 PAVLIVAPMSGH-YATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL-----GPDIHVIAV 175 (406)
T ss_pred CcEEEEcCCchH-HHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh-----CCCCcEEEE
Confidence 678999999754 44556899999999 99999999988776543333332333333334444333 334999999
Q ss_pred chhHHHHHHHHhhcCC---CCCceEEEEEcCCCChHHHHHHHhh----hhhHH-------------------HHHHHH-H
Q 013936 235 SIGANILVKYLGENGV---NTPLVGAAAICSPWDLLICDRFINR----RLVQK-------------------CYDRVI-A 287 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~---~~~v~~~v~i~~p~~~~~~~~~~~~----~~~~~-------------------~~~~~~-~ 287 (433)
|+||..++.+++...+ ..+++.++++++|.|.......+.. ..... .+...+ .
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 9999998877766532 2269999999999997543111111 00000 111110 0
Q ss_pred HHH-----HHHHHhhhhhhhccC--CHHHHhcCCCHHHHHHhhhhccC----CC-CCHHHHHhhCCcc----------cc
Q 013936 288 IGL-----RGFAQLHQSTVARLA--DWEGITKSRSIRDFDNHATRVLG----KF-ETVDAYYRHSSSA----------NF 345 (433)
Q Consensus 288 ~~l-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~----~~-~~~~~y~~~~s~~----------~~ 345 (433)
..+ .+....+...+.... +.+.. .....+.+.+..... -| ..+.+.|++.... -.
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~---~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vd 332 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQEA---DKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVD 332 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcchH---HHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEec
Confidence 000 000111111111110 11111 111212221111110 01 2344555544322 25
Q ss_pred cCCCc-cceEEEeeCCCCcCCCCCCChh--HHh--cCCCeEEEEcCCCCeeeeccCCc-CCCCcHHHHHHHHHHH
Q 013936 346 VRNVS-VPLLCISTLDDPVCTREAIPWD--ECR--ANEKIILATTRHGGHLAFYEGIT-AKSLWWVRAVNVFLDA 414 (433)
Q Consensus 346 l~~i~-~P~Lii~g~dD~ivp~~~~~~~--~~~--~~~~~~l~~~~~gGH~~~~e~~~-~~~~w~~~~v~~Fl~~ 414 (433)
+++|+ +|+|.+.|++|.|+|++..... ++. .....+..+.+++||.|.+.|.. +++.| ..|.+||.+
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~--P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIY--PLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhc--hHHHHHHHh
Confidence 67898 9999999999999999865442 221 33456677777899999998742 23334 889999875
No 87
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=6.3e-12 Score=113.85 Aligned_cols=208 Identities=17% Similarity=0.124 Sum_probs=141.7
Q ss_pred eEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC-C
Q 013936 116 RHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG-L 194 (433)
Q Consensus 116 r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG-~ 194 (433)
...+..+| +.+...+..|.. ....|.||++|++.|-. .+++..++.+++.||.|+++|+-+ .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~--------------~~~~P~VIv~hei~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~ 66 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG--------------AGGFPGVIVLHEIFGLN--PHIRDVARRLAKAGYVVLAPDLYGRQ 66 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc--------------CCCCCEEEEEecccCCc--hHHHHHHHHHHhCCcEEEechhhccC
Confidence 34566676 788877877654 23339999999998754 367999999999999999999987 4
Q ss_pred CCCCCCC--CC-cc--------cCCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEc
Q 013936 195 GGISLTS--DC-FY--------NGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAIC 261 (433)
Q Consensus 195 G~s~~~~--~~-~~--------~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~ 261 (433)
|.+.... +. .. ......|+.+.++++..+- ...+|.++|+||||.+++.++.+.++ ++++++.-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fy 143 (236)
T COG0412 67 GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFY 143 (236)
T ss_pred CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEec
Confidence 4332211 10 00 1223479999999998664 35679999999999999999988875 88988764
Q ss_pred CCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCC
Q 013936 262 SPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSS 341 (433)
Q Consensus 262 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s 341 (433)
+.....
T Consensus 144 g~~~~~-------------------------------------------------------------------------- 149 (236)
T COG0412 144 GGLIAD-------------------------------------------------------------------------- 149 (236)
T ss_pred CCCCCC--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCCccceEEEeeCCCCcCCCCCCChh---HHhcCCCeEEEEcCCCCeeeeccC----CcCCCC---cHHHHHHHH
Q 013936 342 SANFVRNVSVPLLCISTLDDPVCTREAIPWD---ECRANEKIILATTRHGGHLAFYEG----ITAKSL---WWVRAVNVF 411 (433)
Q Consensus 342 ~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~---~~~~~~~~~l~~~~~gGH~~~~e~----~~~~~~---w~~~~v~~F 411 (433)
......++++|+|++.|+.|+.+|.+..... ......++.+.++++++|--+.+. ..-++. -..+.+.+|
T Consensus 150 ~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~f 229 (236)
T COG0412 150 DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAF 229 (236)
T ss_pred cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHH
Confidence 0011358899999999999999998754432 222334789999999888544331 111110 112778888
Q ss_pred HHHhcc
Q 013936 412 LDALNT 417 (433)
Q Consensus 412 l~~~~~ 417 (433)
|+....
T Consensus 230 f~~~~~ 235 (236)
T COG0412 230 FKRLLG 235 (236)
T ss_pred HHHhcc
Confidence 887653
No 88
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.46 E-value=2.3e-13 Score=122.70 Aligned_cols=165 Identities=19% Similarity=0.203 Sum_probs=107.2
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC-CCCCCCC---cc----c---CCChHHHHHHHHHH
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG-ISLTSDC---FY----N---GGWTEDLRRVIDYL 220 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~-s~~~~~~---~~----~---~~~~~Dl~~~i~~l 220 (433)
.+.|.||++|++.|-. ..++.+++.++++||.|+++|+-+-.. ....... .. . ....+|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4689999999998754 556889999999999999999865433 1111111 11 0 11236788889999
Q ss_pred HHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhh
Q 013936 221 HCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQ 298 (433)
Q Consensus 221 ~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 298 (433)
+.+. ...+|.++|+|+||.+++.++.+.+ .++++++..++.....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~---~~~a~v~~yg~~~~~~------------------------------ 136 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARDP---RVDAAVSFYGGSPPPP------------------------------ 136 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCTT---TSSEEEEES-SSSGGG------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhcc---ccceEEEEcCCCCCCc------------------------------
Confidence 8775 3568999999999999999888773 4899988755111100
Q ss_pred hhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCCh---hHHh
Q 013936 299 STVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW---DECR 375 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~---~~~~ 375 (433)
......++++|+++++|++|+.++.+.... .+..
T Consensus 137 -------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 137 -------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp -------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred -------------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 001224688999999999999999875332 2335
Q ss_pred cCCCeEEEEcCCCCeeeecc
Q 013936 376 ANEKIILATTRHGGHLAFYE 395 (433)
Q Consensus 376 ~~~~~~l~~~~~gGH~~~~e 395 (433)
....+++.++++++|- |..
T Consensus 174 ~~~~~~~~~y~ga~Hg-F~~ 192 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHG-FAN 192 (218)
T ss_dssp TTTTEEEEEETT--TT-TTS
T ss_pred cCCcEEEEECCCCccc-ccC
Confidence 6789999999999994 443
No 89
>PRK10162 acetyl esterase; Provisional
Probab=99.46 E-value=5.6e-12 Score=120.10 Aligned_cols=128 Identities=14% Similarity=0.104 Sum_probs=89.9
Q ss_pred ceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC--CCChhHHHHHHHHHHHh-CCceEEEEeC
Q 013936 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT--SDSAAAYIKHLAFKMAG-HGWNVVVSNH 191 (433)
Q Consensus 115 ~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~--g~s~~~y~~~~~~~l~~-~G~~vv~~d~ 191 (433)
+...+...+| .+.++++.|.. ...|+||++||.+ .++...+ ..++..+++ .|+.|+.+|+
T Consensus 58 ~~~~i~~~~g-~i~~~~y~P~~---------------~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~vdY 120 (318)
T PRK10162 58 RAYMVPTPYG-QVETRLYYPQP---------------DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIGIDY 120 (318)
T ss_pred EEEEEecCCC-ceEEEEECCCC---------------CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEEecC
Confidence 3445666665 68899988742 2468999999943 1222333 567777776 5999999999
Q ss_pred CCCCCCCCCCCCcccCCChHHHHHHHHHHHHh---C--CCCcEEEEEechhHHHHHHHHhhcCC----CCCceEEEEEcC
Q 013936 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ---Y--PEVPLYAVGTSIGANILVKYLGENGV----NTPLVGAAAICS 262 (433)
Q Consensus 192 rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~---~--~~~~i~lvG~S~GG~ia~~~a~~~~~----~~~v~~~v~i~~ 262 (433)
|.....+ + ....+|+.++++++.+. + ...+++++|+|+||++++.++....+ ..++.+++++++
T Consensus 121 rlape~~------~-p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 121 TLSPEAR------F-PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred CCCCCCC------C-CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 9764322 1 12468999999998753 3 24589999999999999988764321 136889999988
Q ss_pred CCCh
Q 013936 263 PWDL 266 (433)
Q Consensus 263 p~~~ 266 (433)
..+.
T Consensus 194 ~~~~ 197 (318)
T PRK10162 194 LYGL 197 (318)
T ss_pred ccCC
Confidence 7765
No 90
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=2.8e-12 Score=118.91 Aligned_cols=114 Identities=24% Similarity=0.198 Sum_probs=79.6
Q ss_pred CCCcEEEEECCCCCCChhH---------HHHHHHH---HHHhCCceEEEEeCCC-CCCCCCCCCC-----cccCC----C
Q 013936 152 EKNPIVVVIPGLTSDSAAA---------YIKHLAF---KMAGHGWNVVVSNHRG-LGGISLTSDC-----FYNGG----W 209 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~---------y~~~~~~---~l~~~G~~vv~~d~rG-~G~s~~~~~~-----~~~~~----~ 209 (433)
....+|++|||++|+++.. ||..++- .+.-..|.||+.|..| |.+|.+++.. .|... .
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 3456799999999965431 4454442 2333459999999999 4366554321 12222 2
Q ss_pred hHHHHHHHHHHHHhCCCCcEE-EEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 210 TEDLRRVIDYLHCQYPEVPLY-AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 210 ~~Dl~~~i~~l~~~~~~~~i~-lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
.+|...+-..+.+..+-+++. +||.||||+.++.++..+|+ ++..++.++++....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccCC
Confidence 356655556777777777776 99999999999999999999 799999888766543
No 91
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.42 E-value=5.1e-12 Score=113.65 Aligned_cols=183 Identities=20% Similarity=0.162 Sum_probs=98.7
Q ss_pred CCCCCcEEEEECCCCCCChhHHHHHHHH-HHHhCCceEEEEeCCC------CCC---CCCCCCCcccC--CChHH-----
Q 013936 150 NCEKNPIVVVIPGLTSDSAAAYIKHLAF-KMAGHGWNVVVSNHRG------LGG---ISLTSDCFYNG--GWTED----- 212 (433)
Q Consensus 150 ~~~~~p~vvllHG~~g~s~~~y~~~~~~-~l~~~G~~vv~~d~rG------~G~---s~~~~~~~~~~--~~~~D----- 212 (433)
.++.+|+||++||+ |++...+ ..... .+.....+++.++-+- .|. +-......... ...++
T Consensus 10 ~~~~~~lvi~LHG~-G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGY-GDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--T-TS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCceEEEEECCC-CCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 46778999999999 4444333 33333 2223467788776543 122 11000000000 11223
Q ss_pred --HHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHH
Q 013936 213 --LRRVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIG 289 (433)
Q Consensus 213 --l~~~i~~l~~~-~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (433)
+.++++...+. .+..+|++.|+|.||++++.++.+++. ++.++|++|+.......
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~-------------------- 145 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESE-------------------- 145 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCC--------------------
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeecccccccc--------------------
Confidence 33333332222 355689999999999999999999998 79999999874332100
Q ss_pred HHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCC
Q 013936 290 LRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAI 369 (433)
Q Consensus 290 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~ 369 (433)
.. .. ..... ++|++++||.+|+++|.+..
T Consensus 146 -----------------~~------------~~--------------------~~~~~--~~pi~~~hG~~D~vvp~~~~ 174 (216)
T PF02230_consen 146 -----------------LE------------DR--------------------PEALA--KTPILIIHGDEDPVVPFEWA 174 (216)
T ss_dssp -----------------CH------------CC--------------------HCCCC--TS-EEEEEETT-SSSTHHHH
T ss_pred -----------------cc------------cc--------------------ccccC--CCcEEEEecCCCCcccHHHH
Confidence 00 00 00111 78999999999999997633
Q ss_pred Ch---hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 370 PW---DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 370 ~~---~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
.. .+.+...++++..++++||-...+ ..+.+.+||++.
T Consensus 175 ~~~~~~L~~~~~~v~~~~~~g~gH~i~~~--------~~~~~~~~l~~~ 215 (216)
T PF02230_consen 175 EKTAEFLKAAGANVEFHEYPGGGHEISPE--------ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHCTT-GEEEEEETT-SSS--HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCCCHH--------HHHHHHHHHhhh
Confidence 22 244556689999999999954332 446788888753
No 92
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.40 E-value=2.8e-12 Score=124.69 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=82.0
Q ss_pred CCCCcEEEEECCCCCCC-hhHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC--C
Q 013936 151 CEKNPIVVVIPGLTSDS-AAAYIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--P 225 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s-~~~y~~~~~~~l~~--~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~ 225 (433)
+..+|++|++|||.++. .+.|...++..+.. ..++|+++|++|+|.+.......+.....+++.++++++.... +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 45678999999997643 23455557766653 3599999999999987644322222223467888888886543 4
Q ss_pred CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 226 EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 226 ~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
.+++++|||||||.+|..++...+. +|.+++.+++.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPA 153 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPA 153 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCC
Confidence 5789999999999999998877776 79999999874
No 93
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.40 E-value=1.2e-12 Score=121.60 Aligned_cols=113 Identities=16% Similarity=0.128 Sum_probs=81.4
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh--CCCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ--YPEV 227 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~ 227 (433)
++.+|++|++|||.++....+...+...+.+ .+|+|+++|++|++...............+++.++++++.+. .+..
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 4567899999999876535555666665544 579999999999843221111011112336888889888776 3456
Q ss_pred cEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 228 PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 228 ~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
++++|||||||.++..++...++ ++.+++.+++...
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCcc
Confidence 89999999999999999988887 7999999986543
No 94
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.37 E-value=5.9e-12 Score=115.17 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=95.9
Q ss_pred CCcEEEEECCCCCCChh-HHHHHHHHHHHhCCceEEEEeCCC----CCCCCCCCCCcccCCChHHHHHHHHHHHHhC---
Q 013936 153 KNPIVVVIPGLTSDSAA-AYIKHLAFKMAGHGWNVVVSNHRG----LGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--- 224 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~-~y~~~~~~~l~~~G~~vv~~d~rG----~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--- 224 (433)
...+|||+.|++.+-.. .|+..+++.|.+.||.++-+.++- +|-+.. ...++|+.++|+|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL-------~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL-------DRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H-------HHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh-------hhHHHHHHHHHHHHHHhhccc
Confidence 44579999999765433 788999999988899999998875 332221 234689999999999884
Q ss_pred -CCCcEEEEEechhHHHHHHHHhhcCC---CCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhh--h
Q 013936 225 -PEVPLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLH--Q 298 (433)
Q Consensus 225 -~~~~i~lvG~S~GG~ia~~~a~~~~~---~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~ 298 (433)
...+|+++|||-|..-++.|+..... ..+|+|+|+-++.-|.+........ +..+.+.+... ++.+... .
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~---~~~~~~~v~~A-~~~i~~g~~~ 180 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE---REAYEELVALA-KELIAEGKGD 180 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH------HHHHHHHH-HHHHHCT-TT
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc---hHHHHHHHHHH-HHHHHcCCCC
Confidence 46789999999999999999987643 3479999999887665443222211 01122221110 1111100 0
Q ss_pred hhhhccCCHHHH--hcCCCHHHHHHhhhhccCCCCCHHHHHhhC----CcccccCCCccceEEEeeCCCCcCCCCCCChh
Q 013936 299 STVARLADWEGI--TKSRSIRDFDNHATRVLGKFETVDAYYRHS----SSANFVRNVSVPLLCISTLDDPVCTREAIPWD 372 (433)
Q Consensus 299 ~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~----s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~ 372 (433)
..++... ...+ ...-+...|..... ...-++|+... .....+.+|++|+|++.|.+|..+|...-...
T Consensus 181 ~~lp~~~-~~~~~~~~PiTA~Rf~SL~s-----~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~ 254 (303)
T PF08538_consen 181 EILPREF-TPLVFYDTPITAYRFLSLAS-----PGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEA 254 (303)
T ss_dssp -GG-----GGTTT-SS---HHHHHT-S------SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT----------
T ss_pred ceeeccc-cccccCCCcccHHHHHhccC-----CCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccc
Confidence 0000000 0000 01112223322211 11223444322 12246678899999999999999987521111
Q ss_pred H-----HhcCC---CeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHH
Q 013936 373 E-----CRANE---KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 373 ~-----~~~~~---~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~ 413 (433)
+ ....+ ...-.++|+++|..--++......|+.++|..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 1 11111 12256889999965433211113488899999975
No 95
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.34 E-value=1.2e-10 Score=104.23 Aligned_cols=126 Identities=18% Similarity=0.190 Sum_probs=90.9
Q ss_pred EEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 118 ~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
.+...+|..+.++-..... .+...+..+||-+||-+|+..+ ++.+...|.+.|.|++.+|+||+|.+
T Consensus 10 k~~~~~~~~~~~~a~y~D~-----------~~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t 76 (297)
T PF06342_consen 10 KFQAENGKIVTVQAVYEDS-----------LPSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFT 76 (297)
T ss_pred EcccccCceEEEEEEEEec-----------CCCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCC
Confidence 3456678888887443221 2234556689999999987544 48888999999999999999999999
Q ss_pred CCCCCCcccCCChHHHHHHHHHHHHhCC-CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 198 SLTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 198 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
+......|+. ++-...++.+.++.. ..+++++|||.|+-.|+.++...| ..|+++++++
T Consensus 77 ~~~~~~~~~n---~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~ 136 (297)
T PF06342_consen 77 PGYPDQQYTN---EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPP 136 (297)
T ss_pred CCCcccccCh---HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCC
Confidence 8765544443 333333333333322 357999999999999999999884 5689988875
No 96
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.32 E-value=2.1e-11 Score=120.17 Aligned_cols=262 Identities=15% Similarity=0.023 Sum_probs=153.4
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCCh---hHHHHHHHH---HHHhCCce
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSA---AAYIKHLAF---KMAGHGWN 185 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~---~~y~~~~~~---~l~~~G~~ 185 (433)
...+.+.++|.||.+|+.|.+.|.+ ..+.|+++..+-++=... ..-...... .++.+||.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~--------------~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYa 82 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG--------------AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYA 82 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC--------------CCCCceeEEeeccccccccccCcchhhcccccceeecCceE
Confidence 3456678999999999999999864 467898888882111000 000122333 57789999
Q ss_pred EEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh-CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 186 VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 186 vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~-~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
||..|.||.|.|++.....+. ...+|-.++|++|.++ ..+.++..+|.|++|...+..|+..|. -+++++..++..
T Consensus 83 vV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~~~ 159 (563)
T COG2936 83 VVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEGLV 159 (563)
T ss_pred EEEecccccccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeeccccccc
Confidence 999999999999987665555 5678999999999875 457789999999999999999988776 599999888888
Q ss_pred ChHHHHHHHhhhhhHHHHHHHHHH-HHHHHHHhhhhhhhccCCHHHHhcCCCHHHHH-Hhhhh-ccC-----CCCCHHHH
Q 013936 265 DLLICDRFINRRLVQKCYDRVIAI-GLRGFAQLHQSTVARLADWEGITKSRSIRDFD-NHATR-VLG-----KFETVDAY 336 (433)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~-~~~-----~~~~~~~y 336 (433)
|......+........++..+... ....-............+..... +...++.. ..... +.. .....++|
T Consensus 160 D~y~d~~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddf 238 (563)
T COG2936 160 DRYRDDAFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVG-AERWRDAPTELLEGEPYFLELWLEHPLRDDF 238 (563)
T ss_pred cccccccccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhh-hccccccccchhccCcccchhhhcCCCccch
Confidence 865433332221111111111100 00000000000000000000000 00000000 00000 000 02233457
Q ss_pred HhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeee
Q 013936 337 YRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAF 393 (433)
Q Consensus 337 ~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~ 393 (433)
+++.+....+.+|++|+|.|.|=.|..... .+.........+..+++-+- .|..+
T Consensus 239 W~~~~~~~d~~~i~vP~L~i~gW~D~~l~~-~~~~~~~~~~r~~~lvvgPw-~H~~~ 293 (563)
T COG2936 239 WRRGDRVADLSKIKVPALVIGGWSDGYLHT-AIKLFAFLRSRPVKLVVGPW-THGGP 293 (563)
T ss_pred hhccCcccccccCCCcEEEEcccccccccc-hHHHhhhcccCCceeEEccc-ccCCC
Confidence 777777888999999999999999985433 22222223333566666663 55543
No 97
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.31 E-value=2.4e-11 Score=127.41 Aligned_cols=226 Identities=14% Similarity=0.089 Sum_probs=130.3
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh----------------CCCCcEEEEEechh
Q 013936 174 HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ----------------YPEVPLYAVGTSIG 237 (433)
Q Consensus 174 ~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~----------------~~~~~i~lvG~S~G 237 (433)
.+.+++.++||.|++.|.||.|+|++... .+.....+|..++|+|+..+ ..+.+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 45678899999999999999999987532 22234568999999999853 12568999999999
Q ss_pred HHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhH--HHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCC
Q 013936 238 ANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQ--KCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRS 315 (433)
Q Consensus 238 G~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (433)
|.+++..|+..+. .++++|.+++..+...... ....+. ..+...-...+..... .+..+.........
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr--~~G~~~~~~g~~ged~d~l~~~~~------~r~~~~~~~~~~~~ 418 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYR--ENGLVRAPGGYQGEDLDVLAELTY------SRNLLAGDYLRHNE 418 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhh--cCCceeccCCcCCcchhhHHHHhh------hcccCcchhhcchH
Confidence 9999988888776 6999998877655322110 000000 0000000000000000 00000000000000
Q ss_pred -----HHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCC-Chh--HHhcCCCeEEEEcCC
Q 013936 316 -----IRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAI-PWD--ECRANEKIILATTRH 387 (433)
Q Consensus 316 -----~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~-~~~--~~~~~~~~~l~~~~~ 387 (433)
+.++...... .-....+||+..+....+.+|++|+|+++|..|..++.+.. ... +.+...+.++.+. .
T Consensus 419 ~~~~~~~~~~~~~~~---~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~ 494 (767)
T PRK05371 419 ACEKLLAELTAAQDR---KTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-Q 494 (767)
T ss_pred HHHHHHhhhhhhhhh---cCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-C
Confidence 0001111100 01234578888888888999999999999999999986532 221 2222456777665 4
Q ss_pred CCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 388 GGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 388 gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
+||...... ...-+.+.+.+||+..+.
T Consensus 495 g~H~~~~~~---~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 495 GGHVYPNNW---QSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CCccCCCch---hHHHHHHHHHHHHHhccc
Confidence 689643321 111245667888877654
No 98
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.31 E-value=1.6e-11 Score=105.29 Aligned_cols=155 Identities=17% Similarity=0.170 Sum_probs=95.2
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC--CCCcEEEEEe
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGT 234 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~ 234 (433)
|+++||++|+....|...+.+.+... ++|-..|+ . . -|+.+-++.+.+.. .+.++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----~----~---------P~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW----D----N---------PDLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC------T----S-----------HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc----C----C---------CCHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999999988888878888888776 77777666 1 1 23444444444432 2456999999
Q ss_pred chhHHHHHHHHh-hcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcC
Q 013936 235 SIGANILVKYLG-ENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKS 313 (433)
Q Consensus 235 S~GG~ia~~~a~-~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 313 (433)
|+|+..+++|++ +... +|.|+++++++..... ... .+
T Consensus 63 SLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~----~~~----------------------~~-------------- 100 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDP----EPF----------------------PP-------------- 100 (171)
T ss_dssp THHHHHHHHHHHHTCCS--SEEEEEEES--SCGCH----HCC----------------------TC--------------
T ss_pred CHHHHHHHHHHhhcccc--cccEEEEEcCCCcccc----cch----------------------hh--------------
Confidence 999999999995 3444 8999999987633100 000 00
Q ss_pred CCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeee
Q 013936 314 RSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAF 393 (433)
Q Consensus 314 ~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~ 393 (433)
....|.. .....+.+|.++|.++|||++|.+.... .++.. +++++.++++||+.-
T Consensus 101 ------------~~~~f~~-----------~p~~~l~~~~~viaS~nDp~vp~~~a~~-~A~~l-~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 101 ------------ELDGFTP-----------LPRDPLPFPSIVIASDNDPYVPFERAQR-LAQRL-GAELIILGGGGHFNA 155 (171)
T ss_dssp ------------GGCCCTT-----------SHCCHHHCCEEEEEETTBSSS-HHHHHH-HHHHH-T-EEEEETS-TTSSG
T ss_pred ------------hcccccc-----------CcccccCCCeEEEEcCCCCccCHHHHHH-HHHHc-CCCeEECCCCCCccc
Confidence 0001110 0112346777999999999999875544 23332 788999999999877
Q ss_pred ccC
Q 013936 394 YEG 396 (433)
Q Consensus 394 ~e~ 396 (433)
-+|
T Consensus 156 ~~G 158 (171)
T PF06821_consen 156 ASG 158 (171)
T ss_dssp GGT
T ss_pred ccC
Confidence 765
No 99
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.29 E-value=1e-10 Score=94.94 Aligned_cols=167 Identities=16% Similarity=0.166 Sum_probs=120.3
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC--CCCCCcccCCChHHHHHHHHHHHHhCCCCcEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS--LTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLY 230 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~--~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 230 (433)
..-+||+-||-+++.++..+...+..++.+||.|+.++++-...-+ ...+..-.......-..++..++......|++
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 3447899999988888889999999999999999999987533211 11111111122234444555666666566899
Q ss_pred EEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHH
Q 013936 231 AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGI 310 (433)
Q Consensus 231 lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 310 (433)
+-|+||||-++.+.+.+... +|+++++++-|+..... .++
T Consensus 93 ~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGK-------------------------------------Pe~- 132 (213)
T COG3571 93 IGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGK-------------------------------------PEQ- 132 (213)
T ss_pred eccccccchHHHHHHHhhcC--CcceEEEecCccCCCCC-------------------------------------ccc-
Confidence 99999999999999988776 69999999877654210 000
Q ss_pred hcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCe
Q 013936 311 TKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGH 390 (433)
Q Consensus 311 ~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH 390 (433)
. ..+.|..+++|+||.+|+.|++-..+.+. -...++.++++.++++-|
T Consensus 133 --~----------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~adH 180 (213)
T COG3571 133 --L----------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDADH 180 (213)
T ss_pred --c----------------------------hhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCcc
Confidence 0 01356789999999999999998765442 345788999999999999
Q ss_pred e
Q 013936 391 L 391 (433)
Q Consensus 391 ~ 391 (433)
-
T Consensus 181 D 181 (213)
T COG3571 181 D 181 (213)
T ss_pred c
Confidence 4
No 100
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.22 E-value=1.8e-10 Score=100.23 Aligned_cols=232 Identities=17% Similarity=0.167 Sum_probs=117.5
Q ss_pred eEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCC-
Q 013936 116 RHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL- 194 (433)
Q Consensus 116 r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~- 194 (433)
.+.+.+.||.+|+++--.|.+. .....++||+.+|++ -....| ..++.+|+..||+|+.+|..-|
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~------------~~~~~~tiliA~Gf~-rrmdh~-agLA~YL~~NGFhViRyDsl~Hv 69 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN------------EPKRNNTILIAPGFA-RRMDHF-AGLAEYLSANGFHVIRYDSLNHV 69 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT------------S---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B--
T ss_pred cceeEcCCCCEEEEeccCCCCC------------CcccCCeEEEecchh-HHHHHH-HHHHHHHhhCCeEEEeccccccc
Confidence 4678899999999976655431 234568999999995 445566 7899999999999999999874
Q ss_pred CCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHh
Q 013936 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFIN 274 (433)
Q Consensus 195 G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~ 274 (433)
|.|++.-..+....-.+|+..+++|++ ..+..++.++.-|+-|-+|...+++- . +.-+|..-+..++....
T Consensus 70 GlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i-~---lsfLitaVGVVnlr~TL---- 140 (294)
T PF02273_consen 70 GLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI-N---LSFLITAVGVVNLRDTL---- 140 (294)
T ss_dssp -----------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHHH----
T ss_pred cCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc-C---cceEEEEeeeeeHHHHH----
Confidence 556655443333334479999999999 55667799999999999999999854 2 55566555555553221
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceE
Q 013936 275 RRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLL 354 (433)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~L 354 (433)
.+.+.. .++......++...+.+... .. ..-|.. .+.-.++.++.. -.+.++++.+|++
T Consensus 141 --------e~al~~---Dyl~~~i~~lp~dldfeGh~-l~-~~vFv~--dc~e~~w~~l~S------T~~~~k~l~iP~i 199 (294)
T PF02273_consen 141 --------EKALGY---DYLQLPIEQLPEDLDFEGHN-LG-AEVFVT--DCFEHGWDDLDS------TINDMKRLSIPFI 199 (294)
T ss_dssp --------HHHHSS----GGGS-GGG--SEEEETTEE-EE-HHHHHH--HHHHTT-SSHHH------HHHHHTT--S-EE
T ss_pred --------HHHhcc---chhhcchhhCCCcccccccc-cc-hHHHHH--HHHHcCCccchh------HHHHHhhCCCCEE
Confidence 111100 11222222222211111100 00 000110 011133444332 2356788999999
Q ss_pred EEeeCCCCcCCCCCCChhH-HhcCCCeEEEEcCCCCee
Q 013936 355 CISTLDDPVCTREAIPWDE-CRANEKIILATTRHGGHL 391 (433)
Q Consensus 355 ii~g~dD~ivp~~~~~~~~-~~~~~~~~l~~~~~gGH~ 391 (433)
.++|.+|..+....+.... ....+..++...++.+|-
T Consensus 200 aF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 200 AFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp EEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred EEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccch
Confidence 9999999998766544322 236778999999999994
No 101
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=1.3e-10 Score=102.11 Aligned_cols=211 Identities=13% Similarity=0.117 Sum_probs=115.2
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHH----hCCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHC----QYPEV 227 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~----~~~~~ 227 (433)
..++.++++|=-+| +.+.| +.+...+.. -+.++++.+||.|.--.. ....|+.++++.+.. .++++
T Consensus 5 ~~~~~L~cfP~AGG-sa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPHAGG-SASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecCCCC-CHHHH-HHHHhhCCc-hhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCC
Confidence 45566888886544 44555 888887755 499999999999863221 223455555555443 34578
Q ss_pred cEEEEEechhHHHHHHHHhhcCCC-CCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCC
Q 013936 228 PLYAVGTSIGANILVKYLGENGVN-TPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLAD 306 (433)
Q Consensus 228 ~i~lvG~S~GG~ia~~~a~~~~~~-~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 306 (433)
|+.+.||||||++|...|.+.... ....++.+.+...........+ ...-+..+...++.+....
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i-----~~~~D~~~l~~l~~lgG~p--------- 140 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQI-----HHLDDADFLADLVDLGGTP--------- 140 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCc-----cCCCHHHHHHHHHHhCCCC---------
Confidence 999999999999999988775432 2455555554322211111111 1111111222222211100
Q ss_pred HHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcC
Q 013936 307 WEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (433)
Q Consensus 307 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~ 386 (433)
..+.....++++---+.+ ..|.-++.|- . ..-..+.||+.++.|++|+.+..+.+..+........++.+++
T Consensus 141 -~e~led~El~~l~LPilR--AD~~~~e~Y~----~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd 212 (244)
T COG3208 141 -PELLEDPELMALFLPILR--ADFRALESYR----Y-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD 212 (244)
T ss_pred -hHHhcCHHHHHHHHHHHH--HHHHHhcccc----c-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec
Confidence 011111111111100000 0011111111 0 1115789999999999999999886664355666788999998
Q ss_pred CCCeeeecc
Q 013936 387 HGGHLAFYE 395 (433)
Q Consensus 387 ~gGH~~~~e 395 (433)
|||+-..+
T Consensus 213 -GgHFfl~~ 220 (244)
T COG3208 213 -GGHFFLNQ 220 (244)
T ss_pred -Ccceehhh
Confidence 79975444
No 102
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.15 E-value=2.7e-09 Score=99.33 Aligned_cols=240 Identities=11% Similarity=0.107 Sum_probs=127.9
Q ss_pred CCCcEEEEECCCCCCChhHHHHHH-HHHHHhCCceEEEEeCCCCCCCCCCCCCcccC-----------CChHHHHHHHHH
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHL-AFKMAGHGWNVVVSNHRGLGGISLTSDCFYNG-----------GWTEDLRRVIDY 219 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~-~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~-----------~~~~Dl~~~i~~ 219 (433)
+.+|++|.++|. |+..-+.-+.+ +..|.++|+..+.+..+-+|.-+......... ....+...++.|
T Consensus 90 ~~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 468999999997 44322222344 78888999999999999998644321111111 123677888899
Q ss_pred HHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhh
Q 013936 220 LHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL-LICDRFINRRLVQKCYDRVIAIGLRGFAQLHQ 298 (433)
Q Consensus 220 l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 298 (433)
+..+ +..++.+.|.||||.+|...++..|. ++..+-+++..... .-....+..........+.+... .+... .
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~--~~~~~-~ 242 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDT--VYEEE-I 242 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhccc--chhhh-h
Confidence 9888 67799999999999999999998888 56655555532211 11111111110000010000000 00000 0
Q ss_pred hhhhccCCHHHH----hcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHH
Q 013936 299 STVARLADWEGI----TKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDEC 374 (433)
Q Consensus 299 ~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~ 374 (433)
............ ..... .|--......+..+.++..| -.+.-.-.+.++.+++|.+||.+.+. .+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-~Ea~~~m~~~md~~T~l~nf--------~~P~dp~~ii~V~A~~DaYVPr~~v~-~Lq 312 (348)
T PF09752_consen 243 SDIPAQNKSLPLDSMEERRRD-REALRFMRGVMDSFTHLTNF--------PVPVDPSAIIFVAAKNDAYVPRHGVL-SLQ 312 (348)
T ss_pred cccccCcccccchhhccccch-HHHHHHHHHHHHhhcccccc--------CCCCCCCcEEEEEecCceEechhhcc-hHH
Confidence 000000000000 00000 00000000000000000000 01122446899999999999988777 478
Q ss_pred hcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHH
Q 013936 375 RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFL 412 (433)
Q Consensus 375 ~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl 412 (433)
+.-|++++..+++ ||+..+= .+...+.+.|.|=+
T Consensus 313 ~~WPGsEvR~l~g-GHVsA~L---~~q~~fR~AI~Daf 346 (348)
T PF09752_consen 313 EIWPGSEVRYLPG-GHVSAYL---LHQEAFRQAIYDAF 346 (348)
T ss_pred HhCCCCeEEEecC-CcEEEee---echHHHHHHHHHHh
Confidence 8899999999975 9997654 23324556666644
No 103
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.14 E-value=1.4e-09 Score=103.61 Aligned_cols=130 Identities=16% Similarity=0.077 Sum_probs=91.3
Q ss_pred EcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC--CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 120 QTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT--SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 120 ~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~--g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
...++..+.++++.|.. ......|+||++||.+ .++.......+...+...|+.|+++|+|-...
T Consensus 57 ~~~~~~~~~~~~y~p~~------------~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe- 123 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR------------KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPE- 123 (312)
T ss_pred cCCCCCceeEEEECCCC------------CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCC-
Confidence 45566668899998721 1345689999999932 12233332345555667899999999995533
Q ss_pred CCCCCCcccCCChHHHHHHHHHHHHhC-----CCCcEEEEEechhHHHHHHHHhhcCCC--CCceEEEEEcCCCChHH
Q 013936 198 SLTSDCFYNGGWTEDLRRVIDYLHCQY-----PEVPLYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWDLLI 268 (433)
Q Consensus 198 ~~~~~~~~~~~~~~Dl~~~i~~l~~~~-----~~~~i~lvG~S~GG~ia~~~a~~~~~~--~~v~~~v~i~~p~~~~~ 268 (433)
.......+|+.+++.++.++. ..++|+++|+|.||++++.++....+. ....+.+++++..+...
T Consensus 124 ------~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 124 ------HPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ------CCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 223345689999999998763 256899999999999999877654432 25788888888777643
No 104
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.14 E-value=2.5e-10 Score=107.39 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=84.5
Q ss_pred CcEEEEECCCCCCChhHHH------HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCCh-HHHHHHHHHHHHhCCC
Q 013936 154 NPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYPE 226 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~------~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~-~Dl~~~i~~l~~~~~~ 226 (433)
.+.++++|-+.. ..|+ ++++..+.++|..|.++++++=..+.. .+. ...+. +++.++++.+++..+.
T Consensus 107 ~~PlLiVpP~iN---k~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~-~edYi~e~l~~aid~v~~itg~ 180 (445)
T COG3243 107 KRPLLIVPPWIN---KFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKN-LEDYILEGLSEAIDTVKDITGQ 180 (445)
T ss_pred CCceEeeccccC---ceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hcc-HHHHHHHHHHHHHHHHHHHhCc
Confidence 345788888753 2232 578899999999999999997554432 111 12233 7888999999988877
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~ 269 (433)
++|.++|+|.||+++..+++.++.. +|+.++.+.+++|+...
T Consensus 181 ~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~~ 222 (445)
T COG3243 181 KDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSHA 222 (445)
T ss_pred cccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhccc
Confidence 8999999999999999999988874 59999999999987653
No 105
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.13 E-value=1.1e-10 Score=104.49 Aligned_cols=102 Identities=21% Similarity=0.123 Sum_probs=70.9
Q ss_pred EEEECCCCC--CChhHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh-----CCCCc
Q 013936 157 VVVIPGLTS--DSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ-----YPEVP 228 (433)
Q Consensus 157 vvllHG~~g--~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~-----~~~~~ 228 (433)
||++||.+- ++.+.. ..++..+++ .|+.|+++|+|=... .......+|+.++++++.++ .+.++
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~-------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPE-------APFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTT-------SSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeecccccc-------ccccccccccccceeeeccccccccccccc
Confidence 689998432 222333 456666664 899999999994422 22234569999999999987 66678
Q ss_pred EEEEEechhHHHHHHHHhhcCCC--CCceEEEEEcCCCCh
Q 013936 229 LYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWDL 266 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~--~~v~~~v~i~~p~~~ 266 (433)
|+++|+|.||++++.++....+. ..+++++++++..+.
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999988764432 258999999997666
No 106
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.13 E-value=3e-08 Score=88.89 Aligned_cols=271 Identities=13% Similarity=0.150 Sum_probs=160.3
Q ss_pred cceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHH-----HHHHHhCCceEEE
Q 013936 114 YKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHL-----AFKMAGHGWNVVV 188 (433)
Q Consensus 114 ~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~-----~~~l~~~G~~vv~ 188 (433)
.+.+.+.+.- |.+....+..+ ++++|++|-.|.++-++.+.| ..+ +..+.++ |-++-
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~---------------~~~kpaiiTyhDlglN~~scF-q~ff~~p~m~ei~~~-fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDP---------------KGNKPAIITYHDLGLNHKSCF-QGFFNFPDMAEILEH-FCVYH 83 (326)
T ss_pred ceeeeecccc-ccEEEEEecCC---------------CCCCceEEEecccccchHhHh-HHhhcCHhHHHHHhh-eEEEe
Confidence 5667777766 45555555432 336889999999965554433 333 3345555 99999
Q ss_pred EeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH
Q 013936 189 SNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 189 ~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
+|.||+-.-...-+..|..-..+|+++.+-.+.+.+.-..++.+|.-.|++|..++|..+|+ +|.|+|+|++-.....
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAKG 161 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCch
Confidence 99999765433334555555567777777777777766679999999999999999999999 8999999987555433
Q ss_pred HHHHHhhhhh-HHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCccccc-
Q 013936 269 CDRFINRRLV-QKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFV- 346 (433)
Q Consensus 269 ~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l- 346 (433)
..+|...++. +.++..-+....+.++..|.-.-..... +..-+.++...+... .+-.++..|+.....+..|
T Consensus 162 wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~-----~~diVq~Yr~~l~~~-~N~~Nl~~fl~ayn~R~DL~ 235 (326)
T KOG2931|consen 162 WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN-----NSDIVQEYRQHLGER-LNPKNLALFLNAYNGRRDLS 235 (326)
T ss_pred HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc-----cHHHHHHHHHHHHhc-CChhHHHHHHHHhcCCCCcc
Confidence 3333322222 2233333445555554433211000000 011112222222221 1233444444433322221
Q ss_pred -------CCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 347 -------RNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 347 -------~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
..++||+|++.|+..|.+..- ..........+..+..+.++|=+.-.+. |.+ +.+.+.=|++-.
T Consensus 236 ~~r~~~~~tlkc~vllvvGd~Sp~~~~v-v~~n~~Ldp~~ttllk~~d~g~l~~e~q--P~k--l~ea~~~FlqG~ 306 (326)
T KOG2931|consen 236 IERPKLGTTLKCPVLLVVGDNSPHVSAV-VECNSKLDPTYTTLLKMADCGGLVQEEQ--PGK--LAEAFKYFLQGM 306 (326)
T ss_pred ccCCCcCccccccEEEEecCCCchhhhh-hhhhcccCcccceEEEEcccCCcccccC--chH--HHHHHHHHHccC
Confidence 146799999999998876432 1111223445778888888887765542 444 777777787654
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.12 E-value=2.9e-09 Score=95.87 Aligned_cols=104 Identities=20% Similarity=0.248 Sum_probs=79.5
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC------
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY------ 224 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~------ 224 (433)
...-|+|||+||+. ...+.| ..+.++++.+||.||.+|+...+... .....+++.++++|+.+..
T Consensus 14 ~g~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~-------~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 14 AGTYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGGPD-------DTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCCcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCCCC-------cchhHHHHHHHHHHHHhcchhhccc
Confidence 46789999999996 666676 88999999999999999977644311 1234577888888876532
Q ss_pred ----CCCcEEEEEechhHHHHHHHHhhcCC---CCCceEEEEEcCC
Q 013936 225 ----PEVPLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSP 263 (433)
Q Consensus 225 ----~~~~i~lvG~S~GG~ia~~~a~~~~~---~~~v~~~v~i~~p 263 (433)
.-.++.+.|||-||-++...+....+ ..++++++++.|.
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 13479999999999999988877632 2379999998664
No 108
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.11 E-value=2.6e-10 Score=84.31 Aligned_cols=45 Identities=31% Similarity=0.535 Sum_probs=39.7
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL 199 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~ 199 (433)
.+.+|+++||++.. ...| ..+++.|+++||.|+++|+||||.|++
T Consensus 15 ~k~~v~i~HG~~eh-~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 15 PKAVVVIVHGFGEH-SGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred CCEEEEEeCCcHHH-HHHH-HHHHHHHHhCCCEEEEECCCcCCCCCC
Confidence 68899999999654 3455 899999999999999999999999985
No 109
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.10 E-value=3.3e-10 Score=116.95 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=70.8
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC---------CC--Ccc-c--------CC---C
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT---------SD--CFY-N--------GG---W 209 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~---------~~--~~~-~--------~~---~ 209 (433)
..|+||++||++++. ..| ..++..|.++||+|+++|+||||.+... .. ..| + .+ .
T Consensus 448 g~P~VVllHG~~g~~-~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAK-ENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCH-HHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 457999999997754 444 7899999989999999999999998443 11 111 0 01 2
Q ss_pred hHHHHHHHHHHH------Hh------CCCCcEEEEEechhHHHHHHHHhhc
Q 013936 210 TEDLRRVIDYLH------CQ------YPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 210 ~~Dl~~~i~~l~------~~------~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
..|+..+...++ .. ++..+++++||||||.++..++...
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 367777777776 22 5678999999999999999998753
No 110
>COG0400 Predicted esterase [General function prediction only]
Probab=99.09 E-value=2.6e-09 Score=93.88 Aligned_cols=177 Identities=19% Similarity=0.154 Sum_probs=107.1
Q ss_pred cCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC-------CCCcccC-C---ChHHHHHHH
Q 013936 149 LNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT-------SDCFYNG-G---WTEDLRRVI 217 (433)
Q Consensus 149 ~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~-------~~~~~~~-~---~~~Dl~~~i 217 (433)
+.++..|+||++||++|+ ...++ .+...... ...++ ..||-=.-... ....+.. + .++.+.+.+
T Consensus 13 ~~~p~~~~iilLHG~Ggd-e~~~~-~~~~~~~P-~~~~i--s~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 13 PGDPAAPLLILLHGLGGD-ELDLV-PLPELILP-NATLV--SPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCCcEEEEEecCCCC-hhhhh-hhhhhcCC-CCeEE--cCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 356778899999999654 44443 33333333 24443 34442111000 0011110 0 112344445
Q ss_pred HHHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 013936 218 DYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQ 295 (433)
Q Consensus 218 ~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 295 (433)
+...++++ ..+++++|+|-||++++..+..++. .++++++.++-......
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~~-------------------------- 139 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEPE-------------------------- 139 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCCc--------------------------
Confidence 44555554 4789999999999999999999988 79999887663322000
Q ss_pred hhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCCh---h
Q 013936 296 LHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW---D 372 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~---~ 372 (433)
..-..-.+|+++++|+.||+||...... .
T Consensus 140 ------------------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~ 171 (207)
T COG0400 140 ------------------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEY 171 (207)
T ss_pred ------------------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHH
Confidence 0001236799999999999999874433 3
Q ss_pred HHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 373 ECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 373 ~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
+....-++....++ +||-.-.| ..+.+.+|+...
T Consensus 172 l~~~g~~v~~~~~~-~GH~i~~e--------~~~~~~~wl~~~ 205 (207)
T COG0400 172 LTASGADVEVRWHE-GGHEIPPE--------ELEAARSWLANT 205 (207)
T ss_pred HHHcCCCEEEEEec-CCCcCCHH--------HHHHHHHHHHhc
Confidence 44577888999998 89954333 345566677653
No 111
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.09 E-value=8.5e-09 Score=97.23 Aligned_cols=254 Identities=12% Similarity=0.043 Sum_probs=140.3
Q ss_pred EEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCC---CChhHHHHHHHHHHH-hCCceEEEEeCCC
Q 013936 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTS---DSAAAYIKHLAFKMA-GHGWNVVVSNHRG 193 (433)
Q Consensus 118 ~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g---~s~~~y~~~~~~~l~-~~G~~vv~~d~rG 193 (433)
.++....+.+..+.|.|.... .....|+||++||.+- +........++..++ +.+..|+.+|+|=
T Consensus 65 dv~~~~~~~l~vRly~P~~~~-----------~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL 133 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSS-----------SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL 133 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCC-----------cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc
Confidence 345556677788888775521 1257899999999532 222333466777764 4589999999995
Q ss_pred CCCCCCCCCCcccCCChHHHHHHHHHHHHh------CCCCcEEEEEechhHHHHHHHHhhcC----CCCCceEEEEEcCC
Q 013936 194 LGGISLTSDCFYNGGWTEDLRRVIDYLHCQ------YPEVPLYAVGTSIGANILVKYLGENG----VNTPLVGAAAICSP 263 (433)
Q Consensus 194 ~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~------~~~~~i~lvG~S~GG~ia~~~a~~~~----~~~~v~~~v~i~~p 263 (433)
.-..+ .....+|..+++.|+.++ ..-++++++|-|.||++|...+.+.. ...+++|.|++.|.
T Consensus 134 APEh~-------~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 134 APEHP-------FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CCCCC-------CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 43322 223447888888877764 23457999999999999998876643 23479999999886
Q ss_pred CChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcc
Q 013936 264 WDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSA 343 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~ 343 (433)
+........-.+.... ............+.. ..++... . ..++-...+... +..
T Consensus 207 ~~~~~~~~~e~~~~~~-~~~~~~~~~~~~~w~---~~lP~~~---------~--~~~~p~~np~~~-----------~~~ 260 (336)
T KOG1515|consen 207 FQGTDRTESEKQQNLN-GSPELARPKIDKWWR---LLLPNGK---------T--DLDHPFINPVGN-----------SLA 260 (336)
T ss_pred cCCCCCCCHHHHHhhc-CCcchhHHHHHHHHH---HhCCCCC---------C--CcCCcccccccc-----------ccc
Confidence 6543321110000000 000000000000000 0000000 0 001111111000 001
Q ss_pred cccCCCcc-ceEEEeeCCCCcCCCCC-CChhHHhcCCCeEEEEcCCCCeeeeccCCc-CCCCcHHHHHHHHHHHh
Q 013936 344 NFVRNVSV-PLLCISTLDDPVCTREA-IPWDECRANEKIILATTRHGGHLAFYEGIT-AKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 344 ~~l~~i~~-P~Lii~g~dD~ivp~~~-~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~-~~~~w~~~~v~~Fl~~~ 415 (433)
.......+ |+|++.++.|.+..... ....+.+..-.+++..+++|+|..++-... ....-+.+.+.+|++..
T Consensus 261 ~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 261 KDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 12223344 59999999999875442 222345566677788999999988765422 12223456777777653
No 112
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.08 E-value=1.9e-10 Score=107.89 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=79.1
Q ss_pred cceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHH-----------------HHHHH
Q 013936 114 YKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAY-----------------IKHLA 176 (433)
Q Consensus 114 ~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y-----------------~~~~~ 176 (433)
.++..|.+.++..+....+.|.. .+.+.|.||++||-+++. +.. -..+.
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~-------------~~~p~PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g 153 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDG-------------AKGPFPAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYG 153 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT---------------S-EEEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HH
T ss_pred EEEEEEEccCCeeEEEEEEecCC-------------CCCCCCEEEEeCCCCCCc-ccccCCcccccccchhhccccccHH
Confidence 33445666788888888777754 246789999999975542 211 12357
Q ss_pred HHHHhCCceEEEEeCCCCCCCCCCCCCc--cc------------CCCh------HHHHHHHHHHHHhC--CCCcEEEEEe
Q 013936 177 FKMAGHGWNVVVSNHRGLGGISLTSDCF--YN------------GGWT------EDLRRVIDYLHCQY--PEVPLYAVGT 234 (433)
Q Consensus 177 ~~l~~~G~~vv~~d~rG~G~s~~~~~~~--~~------------~~~~------~Dl~~~i~~l~~~~--~~~~i~lvG~ 234 (433)
.+|+++||-|+++|.+|+|......... .. .|++ .|...+++|+..+- ...+|.++|+
T Consensus 154 ~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~Gf 233 (390)
T PF12715_consen 154 DQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGF 233 (390)
T ss_dssp HHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEE
T ss_pred HHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEee
Confidence 8899999999999999999753322110 00 1221 35566888887652 2468999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
||||..++.+++..+. |++.|+.+...
T Consensus 234 SmGg~~a~~LaALDdR---Ika~v~~~~l~ 260 (390)
T PF12715_consen 234 SMGGYRAWWLAALDDR---IKATVANGYLC 260 (390)
T ss_dssp GGGHHHHHHHHHH-TT-----EEEEES-B-
T ss_pred cccHHHHHHHHHcchh---hHhHhhhhhhh
Confidence 9999999988888764 98888775543
No 113
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=3.1e-09 Score=103.97 Aligned_cols=239 Identities=18% Similarity=0.125 Sum_probs=147.6
Q ss_pred CCCCCCcce-E--EEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCC-------ChhHHHHHHHH
Q 013936 108 RAPDISYKR-H--LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSD-------SAAAYIKHLAF 177 (433)
Q Consensus 108 ~~~~~~~~r-~--~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~-------s~~~y~~~~~~ 177 (433)
.++.+.|.. + .+.++.|.++..-.+.|.+.+ ..++.|+|+++-|.++- +...|++ ..
T Consensus 604 ~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~-----------pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~ 670 (867)
T KOG2281|consen 604 APPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQ-----------PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FC 670 (867)
T ss_pred CCCCCccCChhheeeecCCCcEEEEEEEccccCC-----------CCCCCceEEEEcCCCceEEeeccccceehhh--hh
Confidence 344444444 4 347777788888888776532 34568999999996541 1113333 34
Q ss_pred HHHhCCceEEEEeCCCCCCCCCCCCC--cccCCC--hHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcCC
Q 013936 178 KMAGHGWNVVVSNHRGLGGISLTSDC--FYNGGW--TEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 178 ~l~~~G~~vv~~d~rG~G~s~~~~~~--~~~~~~--~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
.|+..||-|+++|.||...-...-.. -...|. .+|-.+.++++.++++ -+++.+-|+|.||.+++..+.++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 57789999999999995432221111 111222 3788899999998874 4689999999999999999999998
Q ss_pred CCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCC
Q 013936 251 NTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKF 330 (433)
Q Consensus 251 ~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 330 (433)
-++.+| .++|.... +.|+...+ .+..|+
T Consensus 751 --IfrvAI-AGapVT~W------------~~YDTgYT-------------------------------------ERYMg~ 778 (867)
T KOG2281|consen 751 --IFRVAI-AGAPVTDW------------RLYDTGYT-------------------------------------ERYMGY 778 (867)
T ss_pred --eeeEEe-ccCcceee------------eeecccch-------------------------------------hhhcCC
Confidence 344444 44543321 11221111 111111
Q ss_pred C-CHHHHHhhCCcc---cccCCCccceEEEeeCCCCcCCCCCCCh---hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCc
Q 013936 331 E-TVDAYYRHSSSA---NFVRNVSVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKSLW 403 (433)
Q Consensus 331 ~-~~~~y~~~~s~~---~~l~~i~~P~Lii~g~dD~ivp~~~~~~---~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w 403 (433)
. +-+.-|...|.. +.++.=.-.+|++||.-|.=|....... .+.++++.-++.++|+--|..=.- .....
T Consensus 779 P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~---es~~~ 855 (867)
T KOG2281|consen 779 PDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNP---ESGIY 855 (867)
T ss_pred CccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCC---ccchh
Confidence 1 111111122211 3444445678999999998776553322 356788899999999999954221 12347
Q ss_pred HHHHHHHHHHH
Q 013936 404 WVRAVNVFLDA 414 (433)
Q Consensus 404 ~~~~v~~Fl~~ 414 (433)
++..+..|+++
T Consensus 856 yE~rll~FlQ~ 866 (867)
T KOG2281|consen 856 YEARLLHFLQE 866 (867)
T ss_pred HHHHHHHHHhh
Confidence 88999999875
No 114
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.05 E-value=7.3e-10 Score=103.34 Aligned_cols=117 Identities=21% Similarity=0.205 Sum_probs=82.2
Q ss_pred CCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCCC
Q 013936 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG--LGGISLTS 201 (433)
Q Consensus 124 G~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG--~G~s~~~~ 201 (433)
++.+.+|.+.++...+ .......|+|++-||.++ +...+ ..+++.+++.||.|.++|++| .|+.+...
T Consensus 49 ~~~~~v~~~~p~~~~~--------~~~~~~~PlvvlshG~Gs-~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~ 118 (365)
T COG4188 49 DRERPVDLRLPQGGTG--------TVALYLLPLVVLSHGSGS-YVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAY 118 (365)
T ss_pred CCccccceeccCCCcc--------ccccCcCCeEEecCCCCC-Cccch-hhhHHHHhhCceEEEeccCCCcccccCChhh
Confidence 5667777666654210 001246899999999954 44555 789999999999999999999 55544322
Q ss_pred CCc--cc----CCChHHHHHHHHHHHHh--CC-------CCcEEEEEechhHHHHHHHHhhcCC
Q 013936 202 DCF--YN----GGWTEDLRRVIDYLHCQ--YP-------EVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 202 ~~~--~~----~~~~~Dl~~~i~~l~~~--~~-------~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
... +. .+...|+..+++++.+. .| ..+|.++|||+||..++..++...+
T Consensus 119 ~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 119 AGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 110 11 13447999999998876 12 3479999999999999988877654
No 115
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.05 E-value=3.3e-09 Score=93.48 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=79.5
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC----C-
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY----P- 225 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~----~- 225 (433)
...-|+|+|+||+.- ..+.| ..+..+++.+||.|+++++-..-. .......++..++++|+.+.. |
T Consensus 43 ~G~yPVilF~HG~~l-~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 43 AGTYPVILFLHGFNL-YNSFY-SQLLAHIASHGFIVVAPQLYTLFP-------PDGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CCCccEEEEeechhh-hhHHH-HHHHHHHhhcCeEEEechhhcccC-------CCchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 567899999999953 44555 889999999999999999875321 112234578899999987652 1
Q ss_pred -----CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 226 -----EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 226 -----~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
..++.++|||.||-.|..+|..+..+.++.++|.+.+.
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35799999999999999998887655578888877553
No 116
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.04 E-value=6.2e-10 Score=95.87 Aligned_cols=159 Identities=17% Similarity=0.152 Sum_probs=110.9
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC-CCCCCCCCCCC--------cccCCChHHHHHHHHHHHHhCC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR-GLGGISLTSDC--------FYNGGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r-G~G~s~~~~~~--------~~~~~~~~Dl~~~i~~l~~~~~ 225 (433)
..||++--+-|-+... .+..++.++.+||.|+++|+- |=.-++..... ........|+..++++|+.+.+
T Consensus 40 ~~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4667776666654433 488999999999999999984 31112211110 1111233799999999998888
Q ss_pred CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccC
Q 013936 226 EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLA 305 (433)
Q Consensus 226 ~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 305 (433)
..+|.++|++|||.++..+....++ +.++++.-+.+.-
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps~~d--------------------------------------- 156 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPSFVD--------------------------------------- 156 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchh---heeeeEecCCcCC---------------------------------------
Confidence 8999999999999999988887775 7777765331110
Q ss_pred CHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChh--HHhcCCC--eE
Q 013936 306 DWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWD--ECRANEK--II 381 (433)
Q Consensus 306 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~--~~~~~~~--~~ 381 (433)
...+.++++|+|++.|+.|+++|++.+... ..+.++. .+
T Consensus 157 -------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 157 -------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 123357889999999999999998865432 2233343 45
Q ss_pred EEEcCCCCeeeec
Q 013936 382 LATTRHGGHLAFY 394 (433)
Q Consensus 382 l~~~~~gGH~~~~ 394 (433)
+.++++-|| ||.
T Consensus 200 v~~f~g~~H-Gf~ 211 (242)
T KOG3043|consen 200 VKTFSGVGH-GFV 211 (242)
T ss_pred EEEcCCccc-hhh
Confidence 899999999 565
No 117
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.02 E-value=4.9e-09 Score=95.07 Aligned_cols=103 Identities=18% Similarity=0.134 Sum_probs=74.8
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEec
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS 235 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S 235 (433)
+|+++||.+|+ ...| ..+++.+...++.|+.++.+|.+... .......+=+...++.|+...+..|+.++|||
T Consensus 2 ~lf~~p~~gG~-~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~-----~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 2 PLFCFPPAGGS-ASSY-RPLARALPDDVIGVYGIEYPGRGDDE-----PPPDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp EEEEESSTTCS-GGGG-HHHHHHHTTTEEEEEEECSTTSCTTS-----HEESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred eEEEEcCCccC-HHHH-HHHHHhCCCCeEEEEEEecCCCCCCC-----CCCCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 58999998764 4556 88999987656999999999997321 11112223345566778888887799999999
Q ss_pred hhHHHHHHHHhhcCC-CCCceEEEEEcCCCC
Q 013936 236 IGANILVKYLGENGV-NTPLVGAAAICSPWD 265 (433)
Q Consensus 236 ~GG~ia~~~a~~~~~-~~~v~~~v~i~~p~~ 265 (433)
+||.+|...|.+-.+ ...+..+++++++..
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999988866422 226889999986544
No 118
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.97 E-value=1.5e-08 Score=93.80 Aligned_cols=109 Identities=18% Similarity=0.254 Sum_probs=79.8
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCCC---CcccCCChHHHHHHHHHHHHh---C
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTSD---CFYNGGWTEDLRRVIDYLHCQ---Y 224 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~---G~~vv~~d~rG~G~s~~~~~---~~~~~~~~~Dl~~~i~~l~~~---~ 224 (433)
++.++++||.+|- -.|...+.+.|.++ .+.|+++.+.||..++.... .....+..+.+...++.+++. +
T Consensus 2 ~~li~~IPGNPGl--v~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGL--VEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCCh--HHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 4689999999874 35558888888754 79999999999987665411 111123335555555555443 3
Q ss_pred --CCCcEEEEEechhHHHHHHHHhhcC-CCCCceEEEEEcCCC
Q 013936 225 --PEVPLYAVGTSIGANILVKYLGENG-VNTPLVGAAAICSPW 264 (433)
Q Consensus 225 --~~~~i~lvG~S~GG~ia~~~a~~~~-~~~~v~~~v~i~~p~ 264 (433)
++.+++++|||+|+.++++.+.+.+ ...+|.+++++.|..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 5788999999999999999999998 333799999998754
No 119
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.97 E-value=1.2e-08 Score=91.76 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=74.5
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHh--------CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhC-
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAG--------HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY- 224 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~--------~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~- 224 (433)
+..|||+||..|+.. . ++.+...+.+ ..++++.+|+...... .. .. ......+-+.+.++++.+.+
T Consensus 4 g~pVlFIhG~~Gs~~-q-~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~-~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYK-Q-VRSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GR-TLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHh-H-HHHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-cc-cHHHHHHHHHHHHHHHHHhhh
Confidence 456999999977643 3 3566655522 2588999998763211 10 11 11133466777888887776
Q ss_pred ----CCCcEEEEEechhHHHHHHHHhhcCC-CCCceEEEEEcCCCChH
Q 013936 225 ----PEVPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWDLL 267 (433)
Q Consensus 225 ----~~~~i~lvG~S~GG~ia~~~a~~~~~-~~~v~~~v~i~~p~~~~ 267 (433)
+.+++++|||||||.++-.++..... ...|+.+|.+++|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 67899999999999999888766542 23699999999987654
No 120
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.96 E-value=6.8e-08 Score=90.47 Aligned_cols=233 Identities=20% Similarity=0.148 Sum_probs=119.1
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCCh--HHHHHHHHHHHHhC------CCCcEEEEEechhHHHHH
Q 013936 171 YIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT--EDLRRVIDYLHCQY------PEVPLYAVGTSIGANILV 242 (433)
Q Consensus 171 y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~--~Dl~~~i~~l~~~~------~~~~i~lvG~S~GG~ia~ 242 (433)
+-..++..+.++||.|++.|+.|.|. .|..+.. .++.+.+...++.. .+.++.++|||-||..++
T Consensus 14 ~e~~~l~~~L~~GyaVv~pDY~Glg~-------~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~ 86 (290)
T PF03583_consen 14 YEAPFLAAWLARGYAVVAPDYEGLGT-------PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAAL 86 (290)
T ss_pred hHHHHHHHHHHCCCEEEecCCCCCCC-------cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHH
Confidence 33456677888999999999999987 2222111 23333333333221 246899999999999986
Q ss_pred HHHh---hcCCCCC--ceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHH---HHhc--
Q 013936 243 KYLG---ENGVNTP--LVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWE---GITK-- 312 (433)
Q Consensus 243 ~~a~---~~~~~~~--v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~-- 312 (433)
..+. ++..+.. +.|+++.++|.++......+.......+....+. ++..........+....... .+..
T Consensus 87 ~AA~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~-gl~~~yP~l~~~~~~~l~~~g~~~~~~~~ 165 (290)
T PF03583_consen 87 WAAELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALL-GLAAAYPELDELLDSYLTPEGRALLDDAR 165 (290)
T ss_pred HHHHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHH-HHHHhCccHHHHHHHHhhHHHHHHHHHHH
Confidence 5442 2323335 8999998888887655443333222112111111 11100000000000000000 0000
Q ss_pred CCCHHHH-HHhhhhcc-----CCCC---------CHHHHHhhCCc-ccccCCCccceEEEeeCCCCcCCCCCCCh---hH
Q 013936 313 SRSIRDF-DNHATRVL-----GKFE---------TVDAYYRHSSS-ANFVRNVSVPLLCISTLDDPVCTREAIPW---DE 373 (433)
Q Consensus 313 ~~~~~~~-d~~~~~~~-----~~~~---------~~~~y~~~~s~-~~~l~~i~~P~Lii~g~dD~ivp~~~~~~---~~ 373 (433)
.....+. ........ .-+. .+...+++.+. ...-..-++|+++.+|..|.++|...... ..
T Consensus 166 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~ 245 (290)
T PF03583_consen 166 TRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKW 245 (290)
T ss_pred hhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHH
Confidence 0000000 00000000 0001 12223332222 00112337999999999999999874432 45
Q ss_pred HhcC-CCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 374 CRAN-EKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 374 ~~~~-~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
|+.. .++++..++.++|..-.- . ......+||+..++.
T Consensus 246 c~~G~a~V~~~~~~~~~H~~~~~---~----~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 246 CAAGGADVEYVRYPGGGHLGAAF---A----SAPDALAWLDDRFAG 284 (290)
T ss_pred HHcCCCCEEEEecCCCChhhhhh---c----CcHHHHHHHHHHHCC
Confidence 6777 799999999999986432 1 125577888877664
No 121
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.95 E-value=2.2e-08 Score=86.91 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=60.6
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCC--ceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHG--WNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G--~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
++++||+.++..+.-.+.+.+.+.+.| ..+.++|++-. .++..+.++.+.++.....+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~---------------p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF---------------PEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC---------------HHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 799999987766654455667777765 34555544311 2444455555555555555999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
||||..|..++.+++- ++ |++.|.+..
T Consensus 67 SlGG~~A~~La~~~~~----~a-vLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYGL----PA-VLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhCC----CE-EEEcCCCCH
Confidence 9999999988877753 33 778877665
No 122
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=2.3e-08 Score=104.91 Aligned_cols=232 Identities=18% Similarity=0.149 Sum_probs=146.6
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCCh--hHHHHHHHH-HHHhCCceEEEEeCCCCCCCCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSA--AAYIKHLAF-KMAGHGWNVVVSNHRGLGGISL 199 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~--~~y~~~~~~-~l~~~G~~vv~~d~rG~G~s~~ 199 (433)
||.+..+....|++.. ...+-|+++.+||.+++.. +.+...+.. .+...|+.|+.+|.||-|+...
T Consensus 506 ~~~~~~~~~~lP~~~~-----------~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~ 574 (755)
T KOG2100|consen 506 DGITANAILILPPNFD-----------PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGW 574 (755)
T ss_pred ccEEEEEEEecCCCCC-----------CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcch
Confidence 8888888888886632 3447799999999876211 111122333 3556899999999999886533
Q ss_pred CCC----CcccCCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHH
Q 013936 200 TSD----CFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI 273 (433)
Q Consensus 200 ~~~----~~~~~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~ 273 (433)
.-. +.......+|...+++++.+.. ...++.++|+|.||.++++.++..++. -++++++++|..+..
T Consensus 575 ~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~-~fkcgvavaPVtd~~------ 647 (755)
T KOG2100|consen 575 DFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGD-VFKCGVAVAPVTDWL------ 647 (755)
T ss_pred hHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCc-eEEEEEEecceeeee------
Confidence 211 1111234578888888877653 345799999999999999999998742 466669998876652
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCC-HHHHHhhCCcccccCCCccc
Q 013936 274 NRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFET-VDAYYRHSSSANFVRNVSVP 352 (433)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~y~~~~s~~~~l~~i~~P 352 (433)
.|....... + .|..+ -..-|...+....+.+++.|
T Consensus 648 -------~yds~~ter---y----------------------------------mg~p~~~~~~y~e~~~~~~~~~~~~~ 683 (755)
T KOG2100|consen 648 -------YYDSTYTER---Y----------------------------------MGLPSENDKGYEESSVSSPANNIKTP 683 (755)
T ss_pred -------eecccccHh---h----------------------------------cCCCccccchhhhccccchhhhhccC
Confidence 111110000 0 00010 01114555566677788777
Q ss_pred e-EEEeeCCCCcCCCCCCCh---hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccCC
Q 013936 353 L-LCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTSP 419 (433)
Q Consensus 353 ~-Lii~g~dD~ivp~~~~~~---~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~~ 419 (433)
. |++||+.|.-++.+.... .+....-..++.++|+.+|--..- ....-+...+..|+......+
T Consensus 684 ~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~---~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 684 KLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV---EVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred CEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc---cchHHHHHHHHHHHHHHcCcc
Confidence 7 999999999998763322 233344449999999999954332 111235577888888655543
No 123
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.92 E-value=4.9e-09 Score=95.37 Aligned_cols=112 Identities=21% Similarity=0.381 Sum_probs=71.1
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHH-hCCc--e--EEEEeCCCC----CCCCCC--CCC---cccCC-------ChH
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMA-GHGW--N--VVVSNHRGL----GGISLT--SDC---FYNGG-------WTE 211 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~-~~G~--~--vv~~d~rG~----G~s~~~--~~~---~~~~~-------~~~ 211 (433)
..| .||+||+.|+..+ +..++..+. ++|. . ++-++.-|. |.-... .|- .|... .+.
T Consensus 11 ~tP-TifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 11 TTP-TIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -EE-EEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCc-EEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 445 6999999776544 478999997 6653 2 344444441 221111 110 11111 224
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCC---CceEEEEEcCCCChH
Q 013936 212 DLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNT---PLVGAAAICSPWDLL 267 (433)
Q Consensus 212 Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~---~v~~~v~i~~p~~~~ 267 (433)
-+..++.+++++|.-.++.+|||||||+.++.|+..++.+. ++..+|.|++|++..
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 57889999999999999999999999999999999876533 589999999999874
No 124
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.91 E-value=5.7e-09 Score=94.81 Aligned_cols=248 Identities=11% Similarity=0.169 Sum_probs=120.4
Q ss_pred CCCcEEEEECCCCCCChhHHHHHH-----HHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHL-----AFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPE 226 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~-----~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~ 226 (433)
.++|++|-.|-++-+..+-| ..+ ++.+. +.+-++=+|.||+..-..+.+..|..-..+++++.+..+.+.+.-
T Consensus 21 ~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l 98 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGL 98 (283)
T ss_dssp TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT-
T ss_pred CCCceEEEeccccccchHHH-HHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCc
Confidence 36999999999854333312 333 23343 469999999999886554445555555556666666666665555
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHhhh-hhhhcc
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQ-KCYDRVIAIGLRGFAQLHQ-STVARL 304 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~-~~~~~~ 304 (433)
+.++.+|--.||+|.+++|..+|+ ++.|+|++++........++...++.. .++..-+....+++...|. ......
T Consensus 99 k~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~ 176 (283)
T PF03096_consen 99 KSVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEE 176 (283)
T ss_dssp --EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHH
T ss_pred cEEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhccccccccc
Confidence 669999999999999999999999 899999998765554333333222211 1111112222333322211 000000
Q ss_pred CCHHHHhcCCCHHHHHHhhhhccCCCCCHH----HHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCe
Q 013936 305 ADWEGITKSRSIRDFDNHATRVLGKFETVD----AYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKI 380 (433)
Q Consensus 305 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~ 380 (433)
.+.+ .+..+.+.+..... -.++. .|-++.+....++...||+|++.|+..|....- ..........+.
T Consensus 177 ~n~D------lv~~yr~~l~~~~N-p~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v-v~~ns~Ldp~~t 248 (283)
T PF03096_consen 177 NNSD------LVQTYRQHLDERIN-PKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV-VEMNSKLDPTKT 248 (283)
T ss_dssp CT-H------HHHHHHHHHHT-TT-HHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH-HHHHHHS-CCCE
T ss_pred ccHH------HHHHHHHHHhcCCC-HHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH-HHHHhhcCcccc
Confidence 0111 11112122111110 11222 333333334455677899999999998875421 111222345678
Q ss_pred EEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 381 ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 381 ~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
.+..++++|=+...|. |.+ +.+.+.=|++-+
T Consensus 249 tllkv~dcGglV~eEq--P~k--laea~~lFlQG~ 279 (283)
T PF03096_consen 249 TLLKVADCGGLVLEEQ--PGK--LAEAFKLFLQGM 279 (283)
T ss_dssp EEEEETT-TT-HHHH---HHH--HHHHHHHHHHHT
T ss_pred eEEEecccCCcccccC--cHH--HHHHHHHHHccC
Confidence 8999999887777763 343 667777777643
No 125
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.85 E-value=1.6e-07 Score=84.31 Aligned_cols=126 Identities=16% Similarity=0.102 Sum_probs=75.3
Q ss_pred CCCCEEEEEeccccccccCCccccccccCCCCC-cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC---C
Q 013936 122 PDGGTIALDWLTYSDVIQGSTHVNRGILNCEKN-PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG---I 197 (433)
Q Consensus 122 ~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~-p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~---s 197 (433)
+-|..+.+..+.|.+. ..+.+. |.|||+||.+..+...+ . .+. .|.-.++.+.+-.+- +
T Consensus 169 ~tgneLkYrly~Pkdy-----------~pdkky~PLvlfLHgagq~g~dn~-~----~l~-sg~gaiawa~pedqcfVlA 231 (387)
T COG4099 169 STGNELKYRLYTPKDY-----------APDKKYYPLVLFLHGAGQGGSDND-K----VLS-SGIGAIAWAGPEDQCFVLA 231 (387)
T ss_pred ccCceeeEEEeccccc-----------CCCCccccEEEEEecCCCCCchhh-h----hhh-cCccceeeecccCceEEEc
Confidence 4588888888887653 234444 99999999755444433 1 121 233444444443330 1
Q ss_pred CCCCCCc-----ccCCChHHHHHHHH-HHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 198 SLTSDCF-----YNGGWTEDLRRVID-YLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 198 ~~~~~~~-----~~~~~~~Dl~~~i~-~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+.-++-+ -..........+++ -+.++|. ..+|+++|.|+||+-++.++.++|+ .+.+++.+|+.++.
T Consensus 232 PQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d~ 306 (387)
T COG4099 232 PQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGDR 306 (387)
T ss_pred ccccccccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCch
Confidence 1000100 00111122233333 4445553 5689999999999999999999999 79999999987663
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.2e-08 Score=86.56 Aligned_cols=204 Identities=13% Similarity=0.093 Sum_probs=123.5
Q ss_pred EEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCC--CCCChhHHHHHHHHHHHhCCceEEEEeCCCC
Q 013936 117 HLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGL--TSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 117 ~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~--~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~ 194 (433)
+.+...-|+.-..|.+.+ +...|..||+||. ..+..... -..+..+.++||+|+.+++-=+
T Consensus 46 e~l~Yg~~g~q~VDIwg~----------------~~~~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY~l~ 108 (270)
T KOG4627|consen 46 EHLRYGEGGRQLVDIWGS----------------TNQAKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGYNLC 108 (270)
T ss_pred hccccCCCCceEEEEecC----------------CCCccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEeccCcC
Confidence 344445555666676654 2356889999992 21222222 3567788899999999876433
Q ss_pred CCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCc-EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHH
Q 013936 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI 273 (433)
Q Consensus 195 G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~-i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~ 273 (433)
... + .......|+..-++++.+.+++.+ +.+-|||.|+.+++....+..+ .+|.|+++.|+.+++....
T Consensus 109 ~q~-----h-tL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~--- 178 (270)
T KOG4627|consen 109 PQV-----H-TLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELS--- 178 (270)
T ss_pred ccc-----c-cHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHh---
Confidence 211 0 111234688888999999988765 5667999999999998877544 2788888887766652110
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCc-ccccCCCccc
Q 013936 274 NRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSS-ANFVRNVSVP 352 (433)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~-~~~l~~i~~P 352 (433)
... +. .+ -|..+ +--+.+|| ...+..+++|
T Consensus 179 ~te-----~g---------------------~d---------------------lgLt~--~~ae~~Scdl~~~~~v~~~ 209 (270)
T KOG4627|consen 179 NTE-----SG---------------------ND---------------------LGLTE--RNAESVSCDLWEYTDVTVW 209 (270)
T ss_pred CCc-----cc---------------------cc---------------------cCccc--chhhhcCccHHHhcCceee
Confidence 000 00 00 00000 00011122 2355788999
Q ss_pred eEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCC
Q 013936 353 LLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGI 397 (433)
Q Consensus 353 ~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~ 397 (433)
+|++.|+.|.---.+.-+ +.........+..+++.+|.-.+|..
T Consensus 210 ilVv~~~~espklieQnr-df~~q~~~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 210 ILVVAAEHESPKLIEQNR-DFADQLRKASFTLFKNYDHYDIIEET 253 (270)
T ss_pred eeEeeecccCcHHHHhhh-hHHHHhhhcceeecCCcchhhHHHHh
Confidence 999999998422112111 23344456889999999999888864
No 127
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.84 E-value=8e-08 Score=80.09 Aligned_cols=159 Identities=15% Similarity=0.209 Sum_probs=94.2
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
+.+|++||+.|++...|...+-..+.. +-.+++. .. .......|++-+.+.++.+ ..++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w--~~P~~~dWi~~l~~~v~a~-----~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DW--EAPVLDDWIARLEKEVNAA-----EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CC--CCCCHHHHHHHHHHHHhcc-----CCCeEEEEe
Confidence 458999999988766664444333322 1112211 00 1111223333333333322 346999999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCC
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 314 (433)
|+|+..+++++.+... +|.|++++++|.-.... ... .
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~-----------~~~------------------------------~ 103 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPE-----------IRP------------------------------K 103 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCCccccc-----------cch------------------------------h
Confidence 9999999999998876 79999999876432100 000 0
Q ss_pred CHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeec
Q 013936 315 SIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFY 394 (433)
Q Consensus 315 ~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~ 394 (433)
....|+. .......-|.+++.+++||+++.+.... . ...=...++.+.++||+.--
T Consensus 104 ~~~tf~~----------------------~p~~~lpfps~vvaSrnDp~~~~~~a~~-~-a~~wgs~lv~~g~~GHiN~~ 159 (181)
T COG3545 104 HLMTFDP----------------------IPREPLPFPSVVVASRNDPYVSYEHAED-L-ANAWGSALVDVGEGGHINAE 159 (181)
T ss_pred hccccCC----------------------CccccCCCceeEEEecCCCCCCHHHHHH-H-HHhccHhheecccccccchh
Confidence 0000000 1123456799999999999999876543 2 22335678888899998655
Q ss_pred cC
Q 013936 395 EG 396 (433)
Q Consensus 395 e~ 396 (433)
+|
T Consensus 160 sG 161 (181)
T COG3545 160 SG 161 (181)
T ss_pred hc
Confidence 54
No 128
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.80 E-value=6.7e-08 Score=85.95 Aligned_cols=109 Identities=18% Similarity=0.216 Sum_probs=73.1
Q ss_pred CCCcEEEEECCCCCCChhHHHH--HHHHHHHhCCceEEEEeCCCCCCCCC-----CCCCcccCCChHHHHHHHHHHHHhC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNHRGLGGISL-----TSDCFYNGGWTEDLRRVIDYLHCQY 224 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~--~~~~~l~~~G~~vv~~d~rG~G~s~~-----~~~~~~~~~~~~Dl~~~i~~l~~~~ 224 (433)
.+.|+||++||.+++ .+.+.. .+.....++||.|+.++......... ........+....+.++++++..++
T Consensus 14 ~~~PLVv~LHG~~~~-a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQS-AEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCCEEEEeCCCCCC-HHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 357999999998654 344422 22334445799999988542111100 0000111234456888999998887
Q ss_pred C--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 225 P--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 225 ~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
+ ..+|++.|+|.||+++..++..+|+ .+.++..+++.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 6 4589999999999999999999999 78877766653
No 129
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.78 E-value=1.1e-08 Score=99.15 Aligned_cols=106 Identities=18% Similarity=0.245 Sum_probs=62.5
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC-CCC--CC-----C-----c-------ccCC---
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI-SLT--SD-----C-----F-------YNGG--- 208 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s-~~~--~~-----~-----~-------~~~~--- 208 (433)
++-|+|||-||++|+ +..| ..++..|+.+||-|+++|+|..... ... .. . . +...
T Consensus 98 ~~~PvvIFSHGlgg~-R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGS-RTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT---TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcc-hhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 568999999999664 6667 7899999999999999999964221 100 00 0 0 0000
Q ss_pred ------------ChHHHHHHHHHHHHhC----------------------CCCcEEEEEechhHHHHHHHHhhcCCCCCc
Q 013936 209 ------------WTEDLRRVIDYLHCQY----------------------PEVPLYAVGTSIGANILVKYLGENGVNTPL 254 (433)
Q Consensus 209 ------------~~~Dl~~~i~~l~~~~----------------------~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v 254 (433)
..+|+..+++.+.+.. .-.++.++|||+||..++..+.+.. ++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~---r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT---RF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T---T-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc---Cc
Confidence 0246777777775311 0236999999999999998887773 59
Q ss_pred eEEEEEcC
Q 013936 255 VGAAAICS 262 (433)
Q Consensus 255 ~~~v~i~~ 262 (433)
+++|++.+
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99998855
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.76 E-value=4.5e-07 Score=83.67 Aligned_cols=119 Identities=19% Similarity=0.186 Sum_probs=80.5
Q ss_pred CcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHH-----HHHHHHHHhCCceEE
Q 013936 113 SYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI-----KHLAFKMAGHGWNVV 187 (433)
Q Consensus 113 ~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~-----~~~~~~l~~~G~~vv 187 (433)
..+|..+.. ||..|.---..-+ .......||++-|.++..+..++ ..+...+.+.|-+|+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~--------------~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl 175 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQP--------------EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVL 175 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCC--------------CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEE
Confidence 567777776 7755532222111 12345578999897654433222 223444445689999
Q ss_pred EEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcC
Q 013936 188 VSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 188 ~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
++|+||.|.|++... ......|..++++|++++.. ...|++.|||+||.++...+..+.
T Consensus 176 ~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 176 VFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred EECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 999999999987542 35667899999999987532 357999999999999987666654
No 131
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.71 E-value=3.8e-08 Score=96.58 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh
Q 013936 168 AAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 168 ~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
...|+..+++.|.+.||.+ ..|++|+|-+...+.. .....+++.+.++.+.+.++..+++++||||||.++..++..
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 3467799999999999866 7899999976433211 123458899999999888888999999999999999999988
Q ss_pred cCCC--CCceEEEEEcCCCChHH
Q 013936 248 NGVN--TPLVGAAAICSPWDLLI 268 (433)
Q Consensus 248 ~~~~--~~v~~~v~i~~p~~~~~ 268 (433)
+++. ..|+..|++++|+....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 7752 24899999999987653
No 132
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.70 E-value=8.2e-09 Score=91.59 Aligned_cols=89 Identities=20% Similarity=0.251 Sum_probs=56.5
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWN---VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~---vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
|||+||..++....| ..+++.|.++||. ++++++-...................+++++|+.++..-+. +|-+||
T Consensus 4 VVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred EEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 899999977555555 7899999999999 79999954433111000000112236888889888877666 999999
Q ss_pred echhHHHHHHHHhh
Q 013936 234 TSIGANILVKYLGE 247 (433)
Q Consensus 234 ~S~GG~ia~~~a~~ 247 (433)
|||||.++-+|+.-
T Consensus 82 HS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 82 HSMGGTIARYYIKG 95 (219)
T ss_dssp ETCHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHH
Confidence 99999999988754
No 133
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.70 E-value=5.4e-07 Score=83.35 Aligned_cols=116 Identities=16% Similarity=0.194 Sum_probs=87.9
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhC---C------ceEEEEeCCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH---G------WNVVVSNHRG 193 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~---G------~~vv~~d~rG 193 (433)
.|-.|.+-...+++.+ ......| ++++|||+|+-.+-| .++..|.+. | |.|+++.++|
T Consensus 132 eGL~iHFlhvk~p~~k----------~~k~v~P-lLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK----------KKKKVKP-LLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred cceeEEEEEecCCccc----------cCCcccc-eEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCC
Confidence 4777777666665421 1233345 799999999765544 577777654 3 8999999999
Q ss_pred CCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceE
Q 013936 194 LGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVG 256 (433)
Q Consensus 194 ~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~ 256 (433)
+|-|+.++...+.. ...+.++..+.-+.+-.+.++-|..+|+.|+.+++.-+|+ +|.|
T Consensus 199 ygwSd~~sk~GFn~---~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~G 256 (469)
T KOG2565|consen 199 YGWSDAPSKTGFNA---AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLG 256 (469)
T ss_pred cccCcCCccCCccH---HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhH
Confidence 99999887766553 4567777777777777889999999999999999999999 5655
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.68 E-value=8.1e-08 Score=81.91 Aligned_cols=101 Identities=18% Similarity=0.140 Sum_probs=77.1
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEec
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS 235 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S 235 (433)
.+||+-|=+|-. ..-+.+++.|+++|+.|+.+|-+-+=-++.+ | .+...|+.+++++..++....+++++|+|
T Consensus 4 ~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-P----~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSERT-P----EQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhhCC-H----HHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 578888865532 4447889999999999999998764333221 2 23468999999999999888999999999
Q ss_pred hhHHHHHHHHhhcCCC--CCceEEEEEcCC
Q 013936 236 IGANILVKYLGENGVN--TPLVGAAAICSP 263 (433)
Q Consensus 236 ~GG~ia~~~a~~~~~~--~~v~~~v~i~~p 263 (433)
+|+-++-....+-|.. .+|+.++++++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 9998887766666642 268999988764
No 135
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.61 E-value=1.2e-07 Score=84.79 Aligned_cols=108 Identities=20% Similarity=0.247 Sum_probs=48.8
Q ss_pred CCcEEEEECCCCCCChhHHHHH----HHHHHHhCCceEEEEeCCCCC--CCCCC------------CCCcc--c------
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKH----LAFKMAGHGWNVVVSNHRGLG--GISLT------------SDCFY--N------ 206 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~----~~~~l~~~G~~vv~~d~rG~G--~s~~~------------~~~~~--~------ 206 (433)
.++-||++||++ ++.+.+ +. +.+.|.+.++..+.+|-+--- ..... ....+ .
T Consensus 3 ~k~riLcLHG~~-~na~if-~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYG-QNAEIF-RQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT---HHHH-HHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCC-cCHHHH-HHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 456799999995 444433 43 334444437999999876521 11100 00111 0
Q ss_pred ---CCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC------CCCCceEEEEEcCCC
Q 013936 207 ---GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG------VNTPLVGAAAICSPW 264 (433)
Q Consensus 207 ---~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~------~~~~v~~~v~i~~p~ 264 (433)
.+..+-+..+.+++.+.-| -..++|+|.||.+|..++.... ...+++.+|++|+..
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 1112233344444444433 2689999999999998875431 123588899887643
No 136
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.61 E-value=3.5e-08 Score=93.69 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=67.7
Q ss_pred CCCCcEEEEECCCCCCC-hhHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCCCCcccC--CCh----HHHHHHHHHH
Q 013936 151 CEKNPIVVVIPGLTSDS-AAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTSDCFYNG--GWT----EDLRRVIDYL 220 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s-~~~y~~~~~~~l~~~---G~~vv~~d~rG~G~s~~~~~~~~~~--~~~----~Dl~~~i~~l 220 (433)
+.++|++|++|||.++. ...++..+.+.+.++ +++|+++|+...... .|.. ..+ ..+..++..|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFL 141 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHH
Confidence 56789999999999877 566778888876554 799999999754321 1211 111 4556666666
Q ss_pred HHh--CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 221 HCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 221 ~~~--~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
... .+.+++++||||+||.+|-..........+|..++.+.|...
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 633 456789999999999999855544433236888998887543
No 137
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.57 E-value=7.8e-07 Score=80.40 Aligned_cols=126 Identities=19% Similarity=0.151 Sum_probs=89.4
Q ss_pred CCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHH--HHHH-hCCceEEEEeC-------
Q 013936 122 PDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLA--FKMA-GHGWNVVVSNH------- 191 (433)
Q Consensus 122 ~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~--~~l~-~~G~~vv~~d~------- 191 (433)
.+|....+.++.|+.. +.+.|.||++||-.++ ...+ .+.. +.++ +.||-|+.+|-
T Consensus 42 ~~g~~r~y~l~vP~g~-------------~~~apLvv~LHG~~~s-gag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 42 VNGLKRSYRLYVPPGL-------------PSGAPLVVVLHGSGGS-GAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred cCCCccceEEEcCCCC-------------CCCCCEEEEEecCCCC-hHHh-hcccchhhhhcccCcEEECcCccccccCC
Confidence 3577778888888763 4455999999998654 4444 3333 3444 46999999842
Q ss_pred CCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 192 rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~--~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
-|++.+..++++.-..+...+++++++.+..++.-+ +|++.|.|-||.++..++.++++ .+.++..+++..
T Consensus 107 ~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 107 NGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 234444333333333455678899999999998754 89999999999999999999998 677777776654
No 138
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.54 E-value=3.1e-08 Score=88.51 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 211 EDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
|-+.+++++++++-. ..+|.++|.|.||-+|+.+++.+++ |+++|+++++.-.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeE
Confidence 567899999987632 3589999999999999999999986 9999999875443
No 139
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.54 E-value=5e-06 Score=80.70 Aligned_cols=103 Identities=15% Similarity=0.086 Sum_probs=68.8
Q ss_pred CCCCcEEEEEC------CCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHH----HHHHHHH
Q 013936 151 CEKNPIVVVIP------GLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDL----RRVIDYL 220 (433)
Q Consensus 151 ~~~~p~vvllH------G~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl----~~~i~~l 220 (433)
..++|.||+=| |++|-... +-+-...+.|+-|+.+.+.-. +.+ ....+|+ .+.++.+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~d----SevG~AL~~GHPvYFV~F~p~-----P~p----gQTl~DV~~ae~~Fv~~V 132 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPD----SEVGVALRAGHPVYFVGFFPE-----PEP----GQTLEDVMRAEAAFVEEV 132 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCcc----cHHHHHHHcCCCeEEEEecCC-----CCC----CCcHHHHHHHHHHHHHHH
Confidence 34567666653 56554332 334444566999988876421 111 1123454 4556667
Q ss_pred HHhCCCC-cEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH
Q 013936 221 HCQYPEV-PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 221 ~~~~~~~-~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
....|+. +.+++|-+.||..++.+|+..|+ .+.-+|+-++|.+...
T Consensus 133 ~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 133 AERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred HHhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCccccc
Confidence 7777765 89999999999999999999999 6777777778877654
No 140
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.52 E-value=1.4e-06 Score=78.84 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=71.7
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC------CCCCCcc----------cCCC-----
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS------LTSDCFY----------NGGW----- 209 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~------~~~~~~~----------~~~~----- 209 (433)
+++-|+|||-||++| ++.-| ..++-.++.+||-|.++.+|-...+- ......+ ..+.
T Consensus 115 ~~k~PvvvFSHGLgg-sRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGG-SRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccccc-chhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 567899999999965 56767 78999999999999999999865431 1000000 0000
Q ss_pred --------hHHHHHHHHHHHHh-----------------------CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEE
Q 013936 210 --------TEDLRRVIDYLHCQ-----------------------YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA 258 (433)
Q Consensus 210 --------~~Dl~~~i~~l~~~-----------------------~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v 258 (433)
.++...+++-|.+- ...+++.++|||+||..++...+.+.+ ++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeee
Confidence 12334444433321 112468999999999999877777655 99998
Q ss_pred EEcC
Q 013936 259 AICS 262 (433)
Q Consensus 259 ~i~~ 262 (433)
++..
T Consensus 270 ~lD~ 273 (399)
T KOG3847|consen 270 ALDA 273 (399)
T ss_pred eeee
Confidence 8743
No 141
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.50 E-value=7.4e-06 Score=74.84 Aligned_cols=217 Identities=15% Similarity=0.137 Sum_probs=116.6
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCC--CcEEEEEe
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPE--VPLYAVGT 234 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~--~~i~lvG~ 234 (433)
+|++=||.|. ....+...++.-.+.|++++++-.+-..-.. +. .+...-+..+++.+.+.... .++++-.+
T Consensus 2 lvvl~gW~gA-~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~---~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGA-KPKHLAKYSDLYQDPGFDILLVTSPPADFFW---PS---KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCC-CHHHHHHHHHHHHhcCCeEEEEeCCHHHHee---ec---cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 4555599865 4445566666667799999998665321111 00 12223444455555544332 28999999
Q ss_pred chhHHHHHHHHhh-----c--CCCC-CceEEEEEcCCCChHH--HHHHHhhhhhHH----H--HHHHHHHHHHHHHHhhh
Q 013936 235 SIGANILVKYLGE-----N--GVNT-PLVGAAAICSPWDLLI--CDRFINRRLVQK----C--YDRVIAIGLRGFAQLHQ 298 (433)
Q Consensus 235 S~GG~ia~~~a~~-----~--~~~~-~v~~~v~i~~p~~~~~--~~~~~~~~~~~~----~--~~~~~~~~l~~~~~~~~ 298 (433)
|.||......+.+ . +... +++|.|.-|+|..... ....+....... + ........+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 149 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLS----- 149 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-----
Confidence 9988887765441 1 1111 3899998888754322 111111000000 0 000000000000
Q ss_pred hhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCCh---hHHh
Q 013936 299 STVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW---DECR 375 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~---~~~~ 375 (433)
.......+......+++...........++|-|++.+++|++++.+.++. ...+
T Consensus 150 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~ 206 (240)
T PF05705_consen 150 -----------------------IISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARR 206 (240)
T ss_pred -----------------------HHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHH
Confidence 00000112222233332222222334557999999999999999986654 2234
Q ss_pred cCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHH
Q 013936 376 ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVF 411 (433)
Q Consensus 376 ~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~F 411 (433)
..-.+....+++++|++++.. ++..+.+.+.+|
T Consensus 207 ~G~~V~~~~f~~S~HV~H~r~---~p~~Y~~~v~~f 239 (240)
T PF05705_consen 207 KGWDVRAEKFEDSPHVAHLRK---HPDRYWRAVDEF 239 (240)
T ss_pred cCCeEEEecCCCCchhhhccc---CHHHHHHHHHhh
Confidence 555699999999999999873 333345777776
No 142
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.50 E-value=1.5e-06 Score=79.52 Aligned_cols=134 Identities=16% Similarity=0.114 Sum_probs=90.8
Q ss_pred CCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 112 ~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
-+.+|-.+++.||.+|.--+..... .........||++-|..|-.+- ..+.--++.||.|+-+|+
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~-----------n~~~ngq~LvIC~EGNAGFYEv----G~m~tP~~lgYsvLGwNh 276 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRP-----------NQSGNGQDLVICFEGNAGFYEV----GVMNTPAQLGYSVLGWNH 276 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCC-----------CCCCCCceEEEEecCCccceEe----eeecChHHhCceeeccCC
Confidence 4667778888899877544432211 1123345678888887664322 223333457999999999
Q ss_pred CCCCCCCCCCCCcccCCChHHHHHHHHHHHHh--CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 192 rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~--~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+|+++|.+.. +.......+.+++++..+. ++...|++.|+|.||.-++..|..+|+ |+++|+-++--|+
T Consensus 277 PGFagSTG~P---~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 277 PGFAGSTGLP---YPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred CCccccCCCC---CcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 9999998653 2222334455667776654 556789999999999999999999998 9998876554333
No 143
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=4.9e-07 Score=89.22 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=96.8
Q ss_pred CcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 113 SYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 113 ~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
..+|+.+...||..+.+..+...+. ..+.++|.+|..+|.-|-+-..+++.--.-|.++|+.....|.|
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~-----------k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDI-----------KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechh-----------hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 4456778888999888887654331 23557898888888655554444444334466789999999999
Q ss_pred CCCCCCCC---CCCccc-CCChHHHHHHHHHHHHhC--CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 193 GLGGISLT---SDCFYN-GGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 193 G~G~s~~~---~~~~~~-~~~~~Dl~~~i~~l~~~~--~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
|=|.-... ..+... ....+|+.+.++++..+. ...++.+.|.|.||.++...+-+.|+ .+.++|+-.+-.|.
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDv 586 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDV 586 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceeh
Confidence 97653211 111111 234589999999998762 24579999999999999988888888 56666554444443
No 144
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.47 E-value=1.7e-06 Score=78.25 Aligned_cols=115 Identities=13% Similarity=0.074 Sum_probs=75.2
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCc--eEEEEeCCCCCCCCCCC-CCcccCCChHHHHHHHHHHHHhCCCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW--NVVVSNHRGLGGISLTS-DCFYNGGWTEDLRRVIDYLHCQYPEV 227 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~--~vv~~d~rG~G~s~~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~ 227 (433)
.+.+.++||+||+..+ -+.-....++....-|+ .++++.+|+.|...... ++........++.++++.+....+..
T Consensus 15 ~~~~~vlvfVHGyn~~-f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNS-FEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCCCeEEEEEeCCCCC-HHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc
Confidence 4567899999999654 33333445544444444 79999999887622110 11100112257888888887776788
Q ss_pred cEEEEEechhHHHHHHHHhhcCCC-------CCceEEEEEcCCCCh
Q 013936 228 PLYAVGTSIGANILVKYLGENGVN-------TPLVGAAAICSPWDL 266 (433)
Q Consensus 228 ~i~lvG~S~GG~ia~~~a~~~~~~-------~~v~~~v~i~~p~~~ 266 (433)
+|++++||||+.+++..+...... .++..+++++|-.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 999999999999999876553211 257788888776555
No 145
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.46 E-value=1.9e-06 Score=85.77 Aligned_cols=227 Identities=15% Similarity=0.140 Sum_probs=140.9
Q ss_pred ceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCC
Q 013936 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 115 ~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~ 194 (433)
+|...+..||..|.+..+...+. ..+.+.|+++..-|--|.+....+....-.|.++|+.-....-||=
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~-----------~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG 488 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDT-----------KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG 488 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEeccc-----------CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc
Confidence 45566778999998887765442 2467889999999977777666656556667899998888888986
Q ss_pred CCCCC---CCCCccc-CCChHHHHHHHHHHHHh-CC-CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH
Q 013936 195 GGISL---TSDCFYN-GGWTEDLRRVIDYLHCQ-YP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 195 G~s~~---~~~~~~~-~~~~~Dl~~~i~~l~~~-~~-~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
|.-.. ...+..+ ..-..|+.++.+++.+. +. ...++++|-|.||+++...+.+.|+ .+.++|+-.|-.|...
T Consensus 489 gelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDvlt 566 (682)
T COG1770 489 GELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDVLT 566 (682)
T ss_pred cccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccchhh
Confidence 54211 1111111 12338999999999876 32 3479999999999999999999998 7888887766555421
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCC
Q 013936 269 CDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRN 348 (433)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~ 348 (433)
.++..+ ...+..||++.-... -+..-+|....|+-+.+..
T Consensus 567 ---------------TMlD~s----------------------lPLT~~E~~EWGNP~---d~e~y~yikSYSPYdNV~a 606 (682)
T COG1770 567 ---------------TMLDPS----------------------LPLTVTEWDEWGNPL---DPEYYDYIKSYSPYDNVEA 606 (682)
T ss_pred ---------------hhcCCC----------------------CCCCccchhhhCCcC---CHHHHHHHhhcCchhcccc
Confidence 111000 012233333331111 1122345555566655544
Q ss_pred C-ccceEEEeeCCCCcCCCCCCChhHHh-----cCCCeEEEEc-CCCCeeeec
Q 013936 349 V-SVPLLCISTLDDPVCTREAIPWDECR-----ANEKIILATT-RHGGHLAFY 394 (433)
Q Consensus 349 i-~~P~Lii~g~dD~ivp~~~~~~~~~~-----~~~~~~l~~~-~~gGH~~~~ 394 (433)
- -.|+|++.|.+|+-|..-.-.+..++ ...+..+.-+ -.+||-|.-
T Consensus 607 ~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~S 659 (682)
T COG1770 607 QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGAS 659 (682)
T ss_pred CCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCC
Confidence 3 46899999999999876432221211 2223334444 468997654
No 146
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.37 E-value=2.8e-06 Score=74.90 Aligned_cols=110 Identities=17% Similarity=0.247 Sum_probs=78.1
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCC-----ceEEEEeCCCCCCCCCC------CC---------CcccCCChHH
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG-----WNVVVSNHRGLGGISLT------SD---------CFYNGGWTED 212 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G-----~~vv~~d~rG~G~s~~~------~~---------~~~~~~~~~D 212 (433)
.-| .||+||.+|+..+ +..++.++...+ --++..|--|.=..++. .| +.....+..=
T Consensus 45 ~iP-TIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIP-TIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccc-eEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 446 4999999776433 478899888764 23566666662111111 01 0111123345
Q ss_pred HHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCC---CceEEEEEcCCCC
Q 013936 213 LRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNT---PLVGAAAICSPWD 265 (433)
Q Consensus 213 l~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~---~v~~~v~i~~p~~ 265 (433)
+..++.++.++|.-.++.+|||||||.-+..|+..++.+. ++...|.+++|++
T Consensus 122 lk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 122 LKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7889999999999899999999999999999999987542 6999999999988
No 147
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.37 E-value=2.4e-05 Score=67.91 Aligned_cols=184 Identities=19% Similarity=0.175 Sum_probs=110.9
Q ss_pred CCcEEEEECCCCCCChhHH---HHHHHHHHHhCCceEEEEeCCC------CCCCCCC----CCCc--c-cC---------
Q 013936 153 KNPIVVVIPGLTSDSAAAY---IKHLAFKMAGHGWNVVVSNHRG------LGGISLT----SDCF--Y-NG--------- 207 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y---~~~~~~~l~~~G~~vv~~d~rG------~G~s~~~----~~~~--~-~~--------- 207 (433)
.++-||++||+.- |...+ ...+-+.+.+. +.++.+|-|- .-.+... .+.. . ..
T Consensus 4 ~k~rvLcLHGfrQ-sg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQ-SGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhh-ccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 3456999999964 33333 12344555554 7888888772 1111110 0000 0 01
Q ss_pred -----CChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh--cC----CCCCceEEEEEcCCCChHHHHHHHhhh
Q 013936 208 -----GWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE--NG----VNTPLVGAAAICSPWDLLICDRFINRR 276 (433)
Q Consensus 208 -----~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~--~~----~~~~v~~~v~i~~p~~~~~~~~~~~~~ 276 (433)
++.+-+..+.+|++++-|- =.++|+|.|+.++..+++. .+ ...+++-+|++|+-....
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~--------- 150 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS--------- 150 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc---------
Confidence 2224477888888887654 4799999999999988872 22 112467777776521110
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEE
Q 013936 277 LVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCI 356 (433)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii 356 (433)
..+. . ......|++|.|-|
T Consensus 151 ---~~~~--------------------------------------------------~--------~~~~~~i~~PSLHi 169 (230)
T KOG2551|consen 151 ---KKLD--------------------------------------------------E--------SAYKRPLSTPSLHI 169 (230)
T ss_pred ---chhh--------------------------------------------------h--------hhhccCCCCCeeEE
Confidence 0000 0 01225789999999
Q ss_pred eeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 357 STLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 357 ~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
.|+.|.++|.+.... +....++..++.- .|||+.- ...-..+.+.+||..+.+.
T Consensus 170 ~G~~D~iv~~~~s~~-L~~~~~~a~vl~H-pggH~VP------~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 170 FGETDTIVPSERSEQ-LAESFKDATVLEH-PGGHIVP------NKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ecccceeecchHHHH-HHHhcCCCeEEec-CCCccCC------CchHHHHHHHHHHHHHHHh
Confidence 999999999886655 5666666644444 4899742 2223668899999887663
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.36 E-value=1.2e-06 Score=80.57 Aligned_cols=130 Identities=13% Similarity=0.052 Sum_probs=79.1
Q ss_pred CCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCC----ceEEEEeCCCCCCC--
Q 013936 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG----WNVVVSNHRGLGGI-- 197 (433)
Q Consensus 124 G~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G----~~vv~~d~rG~G~s-- 197 (433)
|....+.++.|++- ..+..-|+|+++||..+.....-+....+.+.+.| ..+|+++.-+.+..
T Consensus 5 g~~~~~~VylP~~y-----------~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~ 73 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-----------DPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYT 73 (251)
T ss_dssp TEEEEEEEEECTTG-----------GTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTS
T ss_pred CCeEEEEEEECCCC-----------CCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccc
Confidence 45556666666541 24567899999999622111111223344444443 45677776655411
Q ss_pred CCCCC-----CcccCCCh----HHH-HHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 198 SLTSD-----CFYNGGWT----EDL-RRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 198 ~~~~~-----~~~~~~~~----~Dl-~~~i~~l~~~~~~~--~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
....+ .....+.. +.+ .+++.+|.++++.. +..++|+||||..|+.++.++|+ .+.+++++|+.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 74 SWYLPAGSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALD 151 (251)
T ss_dssp BTTSSBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESE
T ss_pred ccccccccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcccc
Confidence 11100 11111222 222 47778888888622 27999999999999999999999 7999999997655
Q ss_pred h
Q 013936 266 L 266 (433)
Q Consensus 266 ~ 266 (433)
.
T Consensus 152 ~ 152 (251)
T PF00756_consen 152 P 152 (251)
T ss_dssp T
T ss_pred c
Confidence 4
No 149
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.34 E-value=9.3e-07 Score=86.47 Aligned_cols=189 Identities=14% Similarity=0.161 Sum_probs=116.7
Q ss_pred CCCcEEEEECCCC-CCChhHHHHHHHHHHHhCC--ceEEEEeCCC-CCCCCCCCCCcccCCChHHHHHHH----HHHHHh
Q 013936 152 EKNPIVVVIPGLT-SDSAAAYIKHLAFKMAGHG--WNVVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVI----DYLHCQ 223 (433)
Q Consensus 152 ~~~p~vvllHG~~-g~s~~~y~~~~~~~l~~~G--~~vv~~d~rG-~G~s~~~~~~~~~~~~~~Dl~~~i----~~l~~~ 223 (433)
...|++++.||.. ....+.++..+-..+...| ..+..+|++- +|+-.. ....+-+..+. ..+..+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI-------~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANI-------KHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcch-------HHHHHHHHHHhhhhhhhhhcc
Confidence 3568999999976 2222333344555555444 4566777775 554111 01112222222 234456
Q ss_pred CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhc
Q 013936 224 YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR 303 (433)
Q Consensus 224 ~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 303 (433)
+|..+|+++|.|||+.+++.....+.+. -|+++|+++-|++.....+
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgpr-------------------------------- 293 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGPR-------------------------------- 293 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCccc--------------------------------
Confidence 8889999999999988888766655542 4899999987766522110
Q ss_pred cCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEE
Q 013936 304 LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILA 383 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~ 383 (433)
|.+ .+.+-.++.|+|++.|..|..|+++.++....+.....+++
T Consensus 294 -------------------------gir-----------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elh 337 (784)
T KOG3253|consen 294 -------------------------GIR-----------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELH 337 (784)
T ss_pred -------------------------CCc-----------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEE
Confidence 000 12334678999999999999999987766555566778899
Q ss_pred EcCCCCeeeeccCCcCC---CC--cHHHHHHHHHHHhc
Q 013936 384 TTRHGGHLAFYEGITAK---SL--WWVRAVNVFLDALN 416 (433)
Q Consensus 384 ~~~~gGH~~~~e~~~~~---~~--w~~~~v~~Fl~~~~ 416 (433)
++.+++|-.-.-+...+ -. .++..+.++|.++.
T Consensus 338 VI~~adhsmaipk~k~esegltqseVd~~i~~aI~efv 375 (784)
T KOG3253|consen 338 VIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFV 375 (784)
T ss_pred EecCCCccccCCccccccccccHHHHHHHHHHHHHHHH
Confidence 99999997655431111 11 24455566555544
No 150
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.34 E-value=3.2e-05 Score=88.02 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=68.2
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHH-HHHHHHHHhCCCCcEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLR-RVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~-~~i~~l~~~~~~~~i~lv 232 (433)
.|.++++||++|+. . .+..++..+.. +++|+.++.+|++.... ..+ ..+++. ..++.+....+..+++++
T Consensus 1068 ~~~l~~lh~~~g~~-~-~~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~---~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGFA-W-QFSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TAT---SLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCch-H-HHHHHHHhcCC-CCcEEEEECCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 46699999997653 3 34788888754 69999999999986421 111 223332 223344444456689999
Q ss_pred EechhHHHHHHHHhhc---CCCCCceEEEEEcC
Q 013936 233 GTSIGANILVKYLGEN---GVNTPLVGAAAICS 262 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~---~~~~~v~~~v~i~~ 262 (433)
||||||.++..++.+. ++ ++..++++++
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~ 1169 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGE--EVAFLGLLDT 1169 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCC--ceeEEEEecC
Confidence 9999999999998864 44 6888887765
No 151
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.22 E-value=1e-05 Score=73.62 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=76.8
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
|+++++||..|. ...| ..++..+... ..|+.++.||.+..... ....-+=+.+.++.|++..|..|+++.|+
T Consensus 1 ~pLF~fhp~~G~-~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~-----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAGGS-VLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP-----FASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCCCc-HHHH-HHHHHHhccC-ceeeccccCcccccccc-----cCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 468999998664 3444 7888888776 99999999998852211 11222335667888999999999999999
Q ss_pred chhHHHHHHHHhhcCC-CCCceEEEEEcCCCC
Q 013936 235 SIGANILVKYLGENGV-NTPLVGAAAICSPWD 265 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~-~~~v~~~v~i~~p~~ 265 (433)
|+||++|...|.+--. ...|..++++.++..
T Consensus 73 S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999988776321 125889999987766
No 152
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.21 E-value=3.5e-06 Score=75.61 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=53.1
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCcccCCChHHH-HHHHHHHHHhCC-CCc
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDL-RRVIDYLHCQYP-EVP 228 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~--~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl-~~~i~~l~~~~~-~~~ 228 (433)
+.-.||++||+.|+... ++.+...+.. ..+.-..+...+.......+... .....+.+ .++.+.+..... ..+
T Consensus 3 ~~hLvV~vHGL~G~~~d--~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~g-I~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPAD--MRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDG-IDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHH--HHHHHHHHHHhhhhcchhhhhhhcccccccccchh-hHHHHHHHHHHHHHhcccccccccc
Confidence 34579999999887543 3555555544 12221122222221111000000 00011222 222222222222 258
Q ss_pred EEEEEechhHHHHHHHHhhcCCC----C------CceEEEEEcCCCCh
Q 013936 229 LYAVGTSIGANILVKYLGENGVN----T------PLVGAAAICSPWDL 266 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~----~------~v~~~v~i~~p~~~ 266 (433)
|.+|||||||.++-.++....+. . .....+.+++|.-.
T Consensus 80 IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G 127 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLG 127 (217)
T ss_pred ceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCC
Confidence 99999999999987655532211 0 24455667777654
No 153
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.20 E-value=2.7e-05 Score=77.74 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=85.7
Q ss_pred CcceEEEEcCC---CCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHH-----------H
Q 013936 113 SYKRHLFQTPD---GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAF-----------K 178 (433)
Q Consensus 113 ~~~r~~~~~~D---G~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------~ 178 (433)
+....+++..+ +..+.+++++... ...+.|+||.++|.+|+|.. +-.+.+ .
T Consensus 46 ~~~sGy~~v~~~~~~~~lFyw~~~s~~-------------~~~~~Pl~lwlnGGPG~ss~--~G~f~E~GP~~i~~~~~~ 110 (462)
T PTZ00472 46 NQWSGYFDIPGNQTDKHYFYWAFGPRN-------------GNPEAPVLLWMTGGPGCSSM--FALLAENGPCLMNETTGD 110 (462)
T ss_pred cceeEEEEeCCCCCCceEEEEEEEcCC-------------CCCCCCEEEEECCCCcHHHH--HhhhccCCCeEEeCCCCc
Confidence 33455666654 5667766665432 24567999999999987632 111110 0
Q ss_pred HH------hCCceEEEEeC-CCCCCCCCCCCCcc--cCCChHHHHHHHHHHHHhCCC---CcEEEEEechhHHHHHHHHh
Q 013936 179 MA------GHGWNVVVSNH-RGLGGISLTSDCFY--NGGWTEDLRRVIDYLHCQYPE---VPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 179 l~------~~G~~vv~~d~-rG~G~s~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~~---~~i~lvG~S~GG~ia~~~a~ 246 (433)
+. .+-.+++.+|. +|+|.|........ .....+|+.++++...+++|. .+++++|+|+||..+..+|.
T Consensus 111 ~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 111 IYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred eeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 10 11267899996 58888765432211 123457888888877777764 89999999999999887765
Q ss_pred hcC--------CCCCceEEEEEcCCC
Q 013936 247 ENG--------VNTPLVGAAAICSPW 264 (433)
Q Consensus 247 ~~~--------~~~~v~~~v~i~~p~ 264 (433)
+-- ....++|+++..+..
T Consensus 191 ~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 191 RINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHhhccccCCceeeeEEEEEecccc
Confidence 531 112577777655443
No 154
>PLN02606 palmitoyl-protein thioesterase
Probab=98.17 E-value=0.0001 Score=67.86 Aligned_cols=105 Identities=11% Similarity=0.115 Sum_probs=66.0
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCC--CCcE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP--EVPL 229 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i 229 (433)
..| ||+.||++.+....-+..+.+.+.+ .|+-+.++- .|-+. ...+.....+.+..+.+.++. -+ ..-+
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~-~~~L~~G~ 97 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQ-MKELSEGY 97 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhc-chhhcCce
Confidence 445 7999999622222235677777753 366555554 23211 112222333555566555554 11 1249
Q ss_pred EEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 230 ~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
.++|+|.||.++-.++.+.+...+|+-.|.+++|-.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999999876347999999998654
No 155
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.16 E-value=5.9e-05 Score=65.20 Aligned_cols=107 Identities=22% Similarity=0.260 Sum_probs=79.5
Q ss_pred CcEEEEECCCCCCC-hhHHHHHHHHHHHhCCceEEEEeCCC----CCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCc
Q 013936 154 NPIVVVIPGLTSDS-AAAYIKHLAFKMAGHGWNVVVSNHRG----LGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 154 ~p~vvllHG~~g~s-~~~y~~~~~~~l~~~G~~vv~~d~rG----~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
+-.|||+-|++.+- ...|...++.++.+.+|..|.+-+|. +|-+.. ....+|+..++++|...--...
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl-------k~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL-------KDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccc-------cccHHHHHHHHHHhhccCcccc
Confidence 35689999985332 23678889999999999999998774 333222 3456899999999876644568
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
++++|||-|..=.+.|+...-.+..+.++|+.++.-|.+
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999999999994433333688888877765553
No 156
>PRK04940 hypothetical protein; Provisional
Probab=98.16 E-value=6.9e-05 Score=63.96 Aligned_cols=35 Identities=9% Similarity=-0.078 Sum_probs=28.5
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
.++.+||.||||..|..++.+++- .+|++.|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCCh
Confidence 479999999999999999888863 46678776655
No 157
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.15 E-value=6.1e-06 Score=83.85 Aligned_cols=126 Identities=18% Similarity=0.109 Sum_probs=78.4
Q ss_pred CEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC---CCChhHHHHHHHHHHHhC--CceEEEEeCC-C-CCCC
Q 013936 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT---SDSAAAYIKHLAFKMAGH--GWNVVVSNHR-G-LGGI 197 (433)
Q Consensus 125 ~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~---g~s~~~y~~~~~~~l~~~--G~~vv~~d~r-G-~G~s 197 (433)
.-+.++.+.|... ...++.|+||++||.+ |+. ..+ ....+.++ |+.|+.+|+| | .|.-
T Consensus 77 dcl~l~i~~p~~~-----------~~~~~~pv~v~ihGG~~~~g~~-~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~ 141 (493)
T cd00312 77 DCLYLNVYTPKNT-----------KPGNSLPVMVWIHGGGFMFGSG-SLY---PGDGLAREGDNVIVVSINYRLGVLGFL 141 (493)
T ss_pred cCCeEEEEeCCCC-----------CCCCCCCEEEEEcCCccccCCC-CCC---ChHHHHhcCCCEEEEEecccccccccc
Confidence 4667777766431 0135679999999932 222 211 12334433 3999999999 5 3322
Q ss_pred CCCCCCcccCCChHHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 198 SLTSDCFYNGGWTEDLRRVIDYLHCQ---YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 198 ~~~~~~~~~~~~~~Dl~~~i~~l~~~---~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
...........-..|...+++++++. ++ ..+|.++|+|.||..+..++........++++|+.|++..
T Consensus 142 ~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 142 STGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 11111111111247999999999875 22 4579999999999999887766433336888888886543
No 158
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.05 E-value=6.1e-05 Score=75.21 Aligned_cols=129 Identities=22% Similarity=0.266 Sum_probs=77.7
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHH-HHHHHHHH-hCCceEEEEeCCCCCCCCCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI-KHLAFKMA-GHGWNVVVSNHRGLGGISLT 200 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~-~~~~~~l~-~~G~~vv~~d~rG~G~s~~~ 200 (433)
+.++...+++...+- -+++.|++|++-|= +.-...++ ..++..++ +.|-.++++.+|-+|.|...
T Consensus 10 ~~~tf~qRY~~n~~~------------~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~ 76 (434)
T PF05577_consen 10 NNGTFSQRYWVNDQY------------YKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPF 76 (434)
T ss_dssp TT-EEEEEEEEE-TT--------------TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TT
T ss_pred CCCeEEEEEEEEhhh------------cCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCc
Confidence 456666666654321 12347887777653 33222222 22334444 45889999999999999754
Q ss_pred CCCccc-------CCChHHHHHHHHHHHHhC---CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 201 SDCFYN-------GGWTEDLRRVIDYLHCQY---PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 201 ~~~~~~-------~~~~~Dl~~~i~~l~~~~---~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
...... ....+|++.++++++.++ ++.|++++|-|.||+++.-+-.++|+ .+.|+++-|+|...
T Consensus 77 ~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a 150 (434)
T PF05577_consen 77 GDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQA 150 (434)
T ss_dssp GGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCH
T ss_pred cccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeee
Confidence 322111 122379999999999775 45799999999999999999999999 79999999988643
No 159
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.03 E-value=0.00012 Score=64.65 Aligned_cols=111 Identities=17% Similarity=0.228 Sum_probs=81.5
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCCCCcc------cCCChHHHHHHHHHHH
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTSDCFY------NGGWTEDLRRVIDYLH 221 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~---G~~vv~~d~rG~G~s~~~~~~~~------~~~~~~Dl~~~i~~l~ 221 (433)
...++.++.++|.+|.. .|...++..+... ...++.+-+.||..-+.+..... ..+..+.+..-+++++
T Consensus 26 ~~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 35789999999999864 5557888887653 25699999999887652211111 1233467888888998
Q ss_pred HhCC-CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 222 CQYP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 222 ~~~~-~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
+..| +.+++++|||.|+.+.+..+-......+|..++++-|.
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPT 146 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecch
Confidence 8877 56899999999999999998865554578888887653
No 160
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=6.4e-05 Score=66.68 Aligned_cols=246 Identities=17% Similarity=0.169 Sum_probs=124.9
Q ss_pred CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHH--HHHHHHhCCceEEEEeCCCCCCCCCC
Q 013936 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKH--LAFKMAGHGWNVVVSNHRGLGGISLT 200 (433)
Q Consensus 123 DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~--~~~~l~~~G~~vv~~d~rG~G~s~~~ 200 (433)
+-++..+.|+.|+. ..|+-|.+-|- |+. .|.+. +.+.+.++|...+++..+-+|.....
T Consensus 98 ~~~~A~~~~liPQK----------------~~~KOG~~a~t-gdh--~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~ 158 (371)
T KOG1551|consen 98 ESRTARVAWLIPQK----------------MADLCLSWALT-GDH--VYTRRLVLSKPINKREIATMVLEKPFYGQRVPE 158 (371)
T ss_pred cccceeeeeecccC----------------cCCeeEEEeec-CCc--eeEeeeeecCchhhhcchheeeecccccccCCH
Confidence 34667788888743 44666666654 331 33333 56778888999999999999875432
Q ss_pred CCCcccCCChHHH----HHHHHHHHHh------CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHH-H
Q 013936 201 SDCFYNGGWTEDL----RRVIDYLHCQ------YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI-C 269 (433)
Q Consensus 201 ~~~~~~~~~~~Dl----~~~i~~l~~~------~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~-~ 269 (433)
......-.+..|+ ++.|+...+. .+-.++.++|-||||.+|...-..++. +|.-+=++++.-.... +
T Consensus 159 ~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~--Pva~~p~l~~~~asvs~t 236 (371)
T KOG1551|consen 159 EQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQK--PVATAPCLNSSKASVSAT 236 (371)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCC--Cccccccccccccchhhh
Confidence 1111111122333 2222222222 234589999999999999877666665 4443333332111111 1
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHh-hh-hhhhccC--CHH---HHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCc
Q 013936 270 DRFINRRLVQKCYDRVIAIGLRGFAQL-HQ-STVARLA--DWE---GITKSRSIRDFDNHATRVLGKFETVDAYYRHSSS 342 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~~~--~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~ 342 (433)
...+.. .+. .++++.+. +. ....+.. ++. +.....+-.|-.......+..+
T Consensus 237 eg~l~~-----~~s-----~~~~~~~~t~~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~------------ 294 (371)
T KOG1551|consen 237 EGLLLQ-----DTS-----KMKRFNQTTNKSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDEC------------ 294 (371)
T ss_pred hhhhhh-----hhH-----HHHhhccCcchhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhh------------
Confidence 111110 011 11111110 00 0000000 000 0000000001000000001111
Q ss_pred ccccCCCccc-----eEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 343 ANFVRNVSVP-----LLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 343 ~~~l~~i~~P-----~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
..+.+..+| +.++.+++|..+|....+. ..+.-|++++...+ |||+.-+- -....|-++|.|-|+.+.+
T Consensus 295 -T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~-lQ~~WPg~eVr~~e-gGHVsayl---~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 295 -THVANFPVPVDPSLIIVVQAKEDAYIPRTGVRS-LQEIWPGCEVRYLE-GGHVSAYL---FKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred -chhhcCCCCCCCCeEEEEEecCCccccccCcHH-HHHhCCCCEEEEee-cCceeeee---hhchHHHHHHHHHHHhhhh
Confidence 122223333 6788899999999977765 67889999999998 89987553 2333578899999987754
No 161
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.00 E-value=0.0002 Score=67.65 Aligned_cols=114 Identities=16% Similarity=0.223 Sum_probs=76.3
Q ss_pred CCCCcEEEEECCCCCCCh-hHHHHHHHHHHHhCCceEEEEeCCC--CCCCCCC--------C--CCcccC----------
Q 013936 151 CEKNPIVVVIPGLTSDSA-AAYIKHLAFKMAGHGWNVVVSNHRG--LGGISLT--------S--DCFYNG---------- 207 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~-~~y~~~~~~~l~~~G~~vv~~d~rG--~G~s~~~--------~--~~~~~~---------- 207 (433)
.+.+.+||++||.+.+.. ...+..+-..|.++||.++.+..+. ....+.. . ......
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 456778999999965543 2456778888999999999999988 1111100 0 000000
Q ss_pred -----------CChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 208 -----------GWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 208 -----------~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
....-+.++++++.+ ++..+++++||+.|+..++.|+.+.+.. .+.++|+|++.+..
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYWPQ 231 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCCCc
Confidence 011234444554443 4566699999999999999999998763 48899999876554
No 162
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.99 E-value=7.4e-05 Score=73.45 Aligned_cols=123 Identities=10% Similarity=0.019 Sum_probs=75.2
Q ss_pred CCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCC----ceEEEEeCCCCCCCCC
Q 013936 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG----WNVVVSNHRGLGGISL 199 (433)
Q Consensus 124 G~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G----~~vv~~d~rG~G~s~~ 199 (433)
|.+..+..|.|++- . ....|+|+++||-.-. ...-+...++.+.++| ..+|.+|..+.. ..
T Consensus 191 g~~r~v~VY~P~~y-----------~-~~~~PvlyllDG~~w~-~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R 255 (411)
T PRK10439 191 GNSRRVWIYTTGDA-----------A-PEERPLAILLDGQFWA-ESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HR 255 (411)
T ss_pred CCceEEEEEECCCC-----------C-CCCCCEEEEEECHHhh-hcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cc
Confidence 55666666666431 1 3467999999994311 1111234566666666 345667653211 00
Q ss_pred CCCCcccCCChHHH-HHHHHHHHHhCC----CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 200 TSDCFYNGGWTEDL-RRVIDYLHCQYP----EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 200 ~~~~~~~~~~~~Dl-~~~i~~l~~~~~----~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
.........+.+.+ .+++-+|.++|+ ..+.+++|+||||..++..+.++|+ .+.+++++|+.
T Consensus 256 ~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs 322 (411)
T PRK10439 256 SQELPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGS 322 (411)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccc
Confidence 00100111222333 566677777765 2468999999999999999999999 79999999875
No 163
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.96 E-value=4.8e-05 Score=65.28 Aligned_cols=130 Identities=21% Similarity=0.357 Sum_probs=72.2
Q ss_pred CEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHH-H-HHHHHHhCCceEEEEeC--CCC---CCC
Q 013936 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK-H-LAFKMAGHGWNVVVSNH--RGL---GGI 197 (433)
Q Consensus 125 ~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~-~-~~~~l~~~G~~vv~~d~--rG~---G~s 197 (433)
-...+..+.|++. +.+..-|++.++-|++.. .+.++. . +-+...++|..||.+|- ||. |..
T Consensus 26 c~Mtf~vylPp~a-----------~~~k~~P~lf~LSGLTCT-~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~ 93 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-----------PRGKRCPVLFYLSGLTCT-HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDD 93 (283)
T ss_pred cceEEEEecCCCc-----------ccCCcCceEEEecCCccc-chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCc
Confidence 4456666777652 234457999999999865 455543 2 33455678999999985 452 111
Q ss_pred CCC----CCCcccC----CChHHHHHHHHHHHHhC-----------CCCcEEEEEechhHHHHHHHHhhcCCCC-CceEE
Q 013936 198 SLT----SDCFYNG----GWTEDLRRVIDYLHCQY-----------PEVPLYAVGTSIGANILVKYLGENGVNT-PLVGA 257 (433)
Q Consensus 198 ~~~----~~~~~~~----~~~~Dl~~~i~~l~~~~-----------~~~~i~lvG~S~GG~ia~~~a~~~~~~~-~v~~~ 257 (433)
+.- ...+|-. -|. .--.+-+|+.+.. ...++.+.||||||.=|+..+.+.+..- .+.+.
T Consensus 94 eswDFG~GAGFYvnAt~epw~-~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAF 172 (283)
T KOG3101|consen 94 ESWDFGQGAGFYVNATQEPWA-KHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAF 172 (283)
T ss_pred ccccccCCceeEEecccchHh-hhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecc
Confidence 100 0011110 111 1112233333221 1346899999999999887666666521 25555
Q ss_pred EEEcCCCChH
Q 013936 258 AAICSPWDLL 267 (433)
Q Consensus 258 v~i~~p~~~~ 267 (433)
.-||.|....
T Consensus 173 API~NP~~cp 182 (283)
T KOG3101|consen 173 APICNPINCP 182 (283)
T ss_pred ccccCcccCc
Confidence 6666665553
No 164
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.90 E-value=8.8e-05 Score=69.26 Aligned_cols=114 Identities=17% Similarity=0.182 Sum_probs=77.0
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCC--ceEEEEeCCCCCCCCCCC-CCcccCCChHHHHHHHHHHHHhCCCCc
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG--WNVVVSNHRGLGGISLTS-DCFYNGGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G--~~vv~~d~rG~G~s~~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
..+.++||+||+..+-.+ -...+++-....| ..++++.+|..|..-... ++........+++.++.+|..+.+..+
T Consensus 114 ~~k~vlvFvHGfNntf~d-av~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED-AVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhH-HHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 567789999999654332 2345666666655 468889999877632211 122222233789999999999988889
Q ss_pred EEEEEechhHHHHHHHHhhc----CC--CCCceEEEEEcCCCCh
Q 013936 229 LYAVGTSIGANILVKYLGEN----GV--NTPLVGAAAICSPWDL 266 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~----~~--~~~v~~~v~i~~p~~~ 266 (433)
|++++||||..+++..+.+. .+ ..+++-+|+-++-.|.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999999776543 11 1246667766665554
No 165
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.88 E-value=0.00011 Score=63.35 Aligned_cols=179 Identities=13% Similarity=0.066 Sum_probs=100.7
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-------C--CcccCC--ChHHHHHHHHHHHH
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTS-------D--CFYNGG--WTEDLRRVIDYLHC 222 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~-------~--~~~~~~--~~~Dl~~~i~~l~~ 222 (433)
+-+||++||+ |++...+ ..+++.+.-+...-+++..+-.--+.... + ...... ..+++....+++..
T Consensus 3 ~atIi~LHgl-GDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGL-GDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecC-CCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 3579999999 5555555 44666665566777777554322211100 0 000011 11233333333322
Q ss_pred -------h-CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 013936 223 -------Q-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFA 294 (433)
Q Consensus 223 -------~-~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 294 (433)
. -+..+|.+-|+||||.+++..+-.++. .+.+.+..++-.... .
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--~l~G~~~~s~~~p~~-----------~--------------- 132 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK--ALGGIFALSGFLPRA-----------S--------------- 132 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc--ccceeeccccccccc-----------h---------------
Confidence 1 234579999999999999988877755 466665543321100 0
Q ss_pred HhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCCh---
Q 013936 295 QLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW--- 371 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~--- 371 (433)
..+ .+... . .+ .+|++..||++|+++|..-...
T Consensus 133 ----~~~--------------------------~~~~~------------~-~~-~~~i~~~Hg~~d~~vp~~~g~~s~~ 168 (206)
T KOG2112|consen 133 ----IGL--------------------------PGWLP------------G-VN-YTPILLCHGTADPLVPFRFGEKSAQ 168 (206)
T ss_pred ----hhc--------------------------cCCcc------------c-cC-cchhheecccCCceeehHHHHHHHH
Confidence 000 00000 0 01 6899999999999999863322
Q ss_pred hHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 372 DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 372 ~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
.+......+++..+++-+|-..-+. .+.+..|+++
T Consensus 169 ~l~~~~~~~~f~~y~g~~h~~~~~e--------~~~~~~~~~~ 203 (206)
T KOG2112|consen 169 FLKSLGVRVTFKPYPGLGHSTSPQE--------LDDLKSWIKT 203 (206)
T ss_pred HHHHcCCceeeeecCCccccccHHH--------HHHHHHHHHH
Confidence 2333444499999999999655442 2557777776
No 166
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.80 E-value=7.5e-05 Score=71.55 Aligned_cols=106 Identities=20% Similarity=0.233 Sum_probs=75.9
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCce---EEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWN---VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~---vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
.++++||+.++ ...+ ..+...+...||. +..++.++-.... + .....+.+...++.+....+..++.++
T Consensus 61 pivlVhG~~~~-~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~---~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 61 PIVLVHGLGGG-YGNF-LPLDYRLAILGWLTNGVYAFELSGGDGTY---S---LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred eEEEEccCcCC-cchh-hhhhhhhcchHHHhcccccccccccCCCc---c---ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 48999998443 3433 6677777777887 8888887651111 1 112335566666666666667889999
Q ss_pred EechhHHHHHHHHhhcCCCCCceEEEEEcCCCChHHH
Q 013936 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~~~ 269 (433)
||||||.++..|++..+...+|+.++.+++|-.....
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~~ 169 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTEL 169 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCchh
Confidence 9999999999889888854589999999988765443
No 167
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.78 E-value=3.9e-05 Score=75.07 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhCCceE-----EE-EeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHH
Q 013936 171 YIKHLAFKMAGHGWNV-----VV-SNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKY 244 (433)
Q Consensus 171 y~~~~~~~l~~~G~~v-----v~-~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~ 244 (433)
++..+++.|.+.||.. .+ +|+|=-- . ....+...+...|+.+.+.. +.|+++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~-------~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP-------A-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch-------h-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 6789999999888753 22 6777321 1 12244577889998888877 8899999999999999999
Q ss_pred HhhcCCC----CCceEEEEEcCCCChH
Q 013936 245 LGENGVN----TPLVGAAAICSPWDLL 267 (433)
Q Consensus 245 a~~~~~~----~~v~~~v~i~~p~~~~ 267 (433)
+...+.. ..|++.|.+++|+...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9887543 2699999999998643
No 168
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.74 E-value=6.7e-05 Score=72.94 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=81.9
Q ss_pred CEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC--CCChhHHHHHHHHHHHhCC-ceEEEEeCCC--CCCCCC
Q 013936 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT--SDSAAAYIKHLAFKMAGHG-WNVVVSNHRG--LGGISL 199 (433)
Q Consensus 125 ~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~--g~s~~~y~~~~~~~l~~~G-~~vv~~d~rG--~G~s~~ 199 (433)
.-+.+..+.|.. ...+.|+||++||.+ +++.+.. ..--..|+++| +-||.+|+|= +|--..
T Consensus 78 DCL~LNIwaP~~-------------~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~ 143 (491)
T COG2272 78 DCLYLNIWAPEV-------------PAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDL 143 (491)
T ss_pred cceeEEeeccCC-------------CCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeeh
Confidence 346666665541 245689999999931 2223322 12345677777 9999999993 443322
Q ss_pred CC---CCcccC-CChHHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 200 TS---DCFYNG-GWTEDLRRVIDYLHCQ---YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 200 ~~---~~~~~~-~~~~Dl~~~i~~l~~~---~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
+. ...+.. --..|...+++|+++. ++ ..+|.++|.|.||+.++.+++.-..+..+..+|+.|++..
T Consensus 144 ~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 144 SSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred hhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 21 122211 1237999999999876 33 3469999999999999987766322335778888887765
No 169
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.65 E-value=0.00019 Score=71.10 Aligned_cols=141 Identities=16% Similarity=0.040 Sum_probs=91.7
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
....+...-+..||..|.+-... .+. ..+ +.|++|.--|.-+-|....+........++|..-+..|
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~-K~~-----------~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~AN 457 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVR-KGA-----------KKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLAN 457 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEe-cCC-----------cCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEe
Confidence 34445556678899999887654 221 123 78887776664333444333445577778899999999
Q ss_pred CCCCCCCCCCC----CCcccCCChHHHHHHHHHHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 191 HRGLGGISLTS----DCFYNGGWTEDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 191 ~rG~G~s~~~~----~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
.||=|.-...- .+.....-.+|..++.+.+.++.= .+++.+.|-|-||.++...+.+.|+ .+.++|+-.|-.
T Consensus 458 IRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPe--lfgA~v~evPll 535 (648)
T COG1505 458 IRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPE--LFGAAVCEVPLL 535 (648)
T ss_pred cccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChh--hhCceeeccchh
Confidence 99966432100 011111234899999999987632 3469999999999999888888898 455555444444
Q ss_pred Ch
Q 013936 265 DL 266 (433)
Q Consensus 265 ~~ 266 (433)
|+
T Consensus 536 DM 537 (648)
T COG1505 536 DM 537 (648)
T ss_pred hh
Confidence 44
No 170
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.58 E-value=0.00014 Score=74.54 Aligned_cols=125 Identities=22% Similarity=0.133 Sum_probs=73.9
Q ss_pred CEEEEEeccccccccCCccccccccCCCCCcEEEEECCCC---CCCh-hHHHHHHHHHHHhCCceEEEEeCCC--CCCCC
Q 013936 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT---SDSA-AAYIKHLAFKMAGHGWNVVVSNHRG--LGGIS 198 (433)
Q Consensus 125 ~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~---g~s~-~~y~~~~~~~l~~~G~~vv~~d~rG--~G~s~ 198 (433)
.-|.++.+.|.... .....|++|++||.+ |++. ..| .-...+.+++.-||.+|+|= +|--.
T Consensus 107 DCL~LnI~~P~~~~-----------~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~ 173 (535)
T PF00135_consen 107 DCLYLNIYTPSNAS-----------SNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLS 173 (535)
T ss_dssp ---EEEEEEETSSS-----------STTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-B
T ss_pred hHHHHhhhhccccc-----------cccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEeccccccccccc
Confidence 46888888776521 122679999999932 2221 223 23445667899999999993 33221
Q ss_pred CCCCCcccCCCh--HHHHHHHHHHHHh---CC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 199 LTSDCFYNGGWT--EDLRRVIDYLHCQ---YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 199 ~~~~~~~~~~~~--~Dl~~~i~~l~~~---~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
....... .+.. .|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..+.++|+.|+.
T Consensus 174 ~~~~~~~-~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 174 LGDLDAP-SGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp SSSTTSH-BSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred ccccccC-chhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 1111111 1232 6999999999986 33 34699999999999998776664334479999999973
No 171
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.58 E-value=0.00027 Score=66.09 Aligned_cols=72 Identities=19% Similarity=0.154 Sum_probs=46.9
Q ss_pred ccccCCCc-cceEEEeeCCCCcCCCCCCChhHHhcCC-CeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHh
Q 013936 343 ANFVRNVS-VPLLCISTLDDPVCTREAIPWDECRANE-KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (433)
Q Consensus 343 ~~~l~~i~-~P~Lii~g~dD~ivp~~~~~~~~~~~~~-~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~ 415 (433)
...+.+++ +|+|+++|.+|.++|............. +.....+++++|....... +...-..+.+.+|+.+.
T Consensus 224 ~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 224 FDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP-PAVEQALDKLAEFLERH 297 (299)
T ss_pred hhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc-HHHHHHHHHHHHHHHHh
Confidence 34455565 7999999999999998755443333333 6777888889997665311 11012447788888764
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.55 E-value=0.00023 Score=72.38 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=60.5
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHh----------------CCceEEEEeCCC-----CCCCCCCCCCcccCCChHHH
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAG----------------HGWNVVVSNHRG-----LGGISLTSDCFYNGGWTEDL 213 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~----------------~G~~vv~~d~rG-----~G~s~~~~~~~~~~~~~~Dl 213 (433)
=.|+|+||..|+... +|.++..... ..|+-.+.|.-+ ||++- ...+|-+
T Consensus 90 IPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtEYV 159 (973)
T KOG3724|consen 90 IPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTEYV 159 (973)
T ss_pred ceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHHHH
Confidence 348999999886533 4666665542 124455555433 11110 1223567
Q ss_pred HHHHHHHHHhCCC---------CcEEEEEechhHHHHHHHHhhcCC-CCCceEEEEEcCCCC
Q 013936 214 RRVIDYLHCQYPE---------VPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWD 265 (433)
Q Consensus 214 ~~~i~~l~~~~~~---------~~i~lvG~S~GG~ia~~~a~~~~~-~~~v~~~v~i~~p~~ 265 (433)
.++|.+|.+.|.+ ..+++|||||||.+|...+..... +..|.-++..++|..
T Consensus 160 ~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 160 NDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 7777777766532 239999999999999866543211 114666777776543
No 173
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.54 E-value=0.00099 Score=57.36 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=74.6
Q ss_pred CCCcEEEEECCCCCCChhHHHH--------------HHHHHHHhCCceEEEEeCCCCCCC--CCCCCCcccCCChHHHHH
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIK--------------HLAFKMAGHGWNVVVSNHRGLGGI--SLTSDCFYNGGWTEDLRR 215 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~--------------~~~~~l~~~G~~vv~~d~rG~G~s--~~~~~~~~~~~~~~Dl~~ 215 (433)
.+...+|++||.+--....|.+ ++++...+.||.|++.|.--+-+- ....+..|...-.+-+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 4556899999964322233433 345677788999999987532210 111233333333345555
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+..++........+++|.||.||...+.++.+.+++.+|.++.+-.+++..
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 555554443355699999999999999999999987788888877776444
No 174
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.52 E-value=0.001 Score=58.77 Aligned_cols=85 Identities=14% Similarity=0.080 Sum_probs=57.2
Q ss_pred HHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCC-
Q 013936 172 IKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV- 250 (433)
Q Consensus 172 ~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~- 250 (433)
+..+...+.. ++.|++++.+|++.+.... ....+.....++.+....+..+++++|||+||.++...+.....
T Consensus 15 ~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 15 YARLAAALRG-RRDVSALPLPGFGPGEPLP-----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred HHHHHHhcCC-CccEEEecCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 3677777765 5899999999998654221 11112233345556666667789999999999999887775322
Q ss_pred CCCceEEEEEcC
Q 013936 251 NTPLVGAAAICS 262 (433)
Q Consensus 251 ~~~v~~~v~i~~ 262 (433)
...+.+++++.+
T Consensus 89 ~~~~~~l~~~~~ 100 (212)
T smart00824 89 GIPPAAVVLLDT 100 (212)
T ss_pred CCCCcEEEEEcc
Confidence 125778877754
No 175
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.46 E-value=0.0017 Score=59.98 Aligned_cols=106 Identities=11% Similarity=0.094 Sum_probs=67.5
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHH--hCCCCc
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHC--QYPEVP 228 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~--~~~~~~ 228 (433)
...| +|+.||++.+....-+..+.+.+.+ .|.-+.++.. |.+. ...+.....+.+..+.+.++. +. ..-
T Consensus 24 ~~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~---~~s~~~~~~~Qve~vce~l~~~~~l-~~G 95 (314)
T PLN02633 24 VSVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV---GDSWLMPLTQQAEIACEKVKQMKEL-SQG 95 (314)
T ss_pred CCCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc---cccceeCHHHHHHHHHHHHhhchhh-hCc
Confidence 3455 7999999544333345666666644 3666665533 3321 222233334555555555554 12 124
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
+.++|+|.||.++-.++.+.++..+|+..|++++|-.
T Consensus 96 ~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999999876347999999998654
No 176
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.45 E-value=0.0024 Score=56.26 Aligned_cols=76 Identities=21% Similarity=0.254 Sum_probs=47.3
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHH-hCCce-EEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMA-GHGWN-VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~-~~G~~-vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
.-.||++-||+.+ .+ .+.+|. ..++. ++++|+|..-- + .| + .. .+.|.+
T Consensus 11 ~~LilfF~GWg~d-~~-----~f~hL~~~~~~D~l~~yDYr~l~~-----d--------~~-------~-~~--y~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMD-PS-----PFSHLILPENYDVLICYDYRDLDF-----D--------FD-------L-SG--YREIYL 61 (213)
T ss_pred CeEEEEEecCCCC-hH-----HhhhccCCCCccEEEEecCccccc-----c--------cc-------c-cc--CceEEE
Confidence 4689999999543 23 223332 33454 45678885421 0 01 1 22 356999
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcC
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICS 262 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~ 262 (433)
||+|||-.+|.+++... +++..++|++
T Consensus 62 vAWSmGVw~A~~~l~~~----~~~~aiAING 88 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGI----PFKRAIAING 88 (213)
T ss_pred EEEeHHHHHHHHHhccC----CcceeEEEEC
Confidence 99999999998887653 4666777764
No 177
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.41 E-value=0.0018 Score=61.85 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=69.4
Q ss_pred CCcEEEEECCCCC---CChh--HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCC
Q 013936 153 KNPIVVVIPGLTS---DSAA--AYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (433)
Q Consensus 153 ~~p~vvllHG~~g---~s~~--~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~ 227 (433)
..|+||++||.+= .... .++..+.+.+. ...++++|+.-...-. ....| .....++.+..+++.+..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~--~~~~y-PtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDE--HGHKY-PTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccccc--CCCcC-chHHHHHHHHHHHHHhccCCC
Confidence 4599999999421 1111 12222333333 4689999997543100 01111 123467888888888666788
Q ss_pred cEEEEEechhHHHHHHHHhhcCC---CCCceEEEEEcCCCChH
Q 013936 228 PLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPWDLL 267 (433)
Q Consensus 228 ~i~lvG~S~GG~ia~~~a~~~~~---~~~v~~~v~i~~p~~~~ 267 (433)
+|+++|-|.||++++.++..-.. ...-+++|+|||-.+..
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999977654322 12367899998866653
No 178
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.27 E-value=0.0029 Score=60.64 Aligned_cols=108 Identities=23% Similarity=0.286 Sum_probs=71.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEE--EeCCCCCCCCCCCCCcc-----------------------
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVV--SNHRGLGGISLTSDCFY----------------------- 205 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~--~d~rG~G~s~~~~~~~~----------------------- 205 (433)
.+.+.+|++++|++|+..+.|...+.+.++++ |+|++ +|+-|.|.-+..++..+
T Consensus 32 Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~~~i 110 (403)
T PF11144_consen 32 KEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDSESI 110 (403)
T ss_pred CCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCcccccc
Confidence 45678999999999998888878888888775 55554 56666553222111000
Q ss_pred -c---------------------------------------------CCC--hHHHHHHHHHHHHhCC----CCcEEEEE
Q 013936 206 -N---------------------------------------------GGW--TEDLRRVIDYLHCQYP----EVPLYAVG 233 (433)
Q Consensus 206 -~---------------------------------------------~~~--~~Dl~~~i~~l~~~~~----~~~i~lvG 233 (433)
. .|. +-|+..++.++.+.++ +-|++++|
T Consensus 111 ~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G 190 (403)
T PF11144_consen 111 NTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIG 190 (403)
T ss_pred ccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEe
Confidence 0 000 1366666666766654 24899999
Q ss_pred echhHHHHHHHHhhcCCCCCceEEEEEc
Q 013936 234 TSIGANILVKYLGENGVNTPLVGAAAIC 261 (433)
Q Consensus 234 ~S~GG~ia~~~a~~~~~~~~v~~~v~i~ 261 (433)
+|.||.+|...+.-.|- .+.+++=-|
T Consensus 191 ~s~G~yla~l~~k~aP~--~~~~~iDns 216 (403)
T PF11144_consen 191 SSHGGYLAHLCAKIAPW--LFDGVIDNS 216 (403)
T ss_pred cCcHHHHHHHHHhhCcc--ceeEEEecC
Confidence 99999999987777777 566666443
No 179
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.26 E-value=0.00084 Score=56.61 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCC--CCceEEEEEcCCCCh
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWDL 266 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~--~~v~~~v~i~~p~~~ 266 (433)
.++...++....++|..+++++||||||.+|..++...... ..+..++..++|-..
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 45666666666668899999999999999999877776542 256778888876543
No 180
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.19 E-value=0.0076 Score=54.61 Aligned_cols=258 Identities=13% Similarity=0.209 Sum_probs=131.7
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
..|.|+++-.+.|. .+...+..++.|... ..|+.-|+-..--.+.....+....+.+-+.++++++ -|+ ++++
T Consensus 102 pdPkvLivapmsGH-~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~--~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSGH-YATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD--AHVM 174 (415)
T ss_pred CCCeEEEEeccccc-HHHHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC--CcEE
Confidence 45788999888776 556668899988764 6888889876555544433332233333344444443 333 5666
Q ss_pred EechhHHHHH---HHHhhcCCCCCceEEEEEcCCCChHHHHH------------HHhhhh-----------hHHHHHH--
Q 013936 233 GTSIGANILV---KYLGENGVNTPLVGAAAICSPWDLLICDR------------FINRRL-----------VQKCYDR-- 284 (433)
Q Consensus 233 G~S~GG~ia~---~~a~~~~~~~~v~~~v~i~~p~~~~~~~~------------~~~~~~-----------~~~~~~~-- 284 (433)
+.+.-+.-++ .++++.++...-..++++++|.|...... |+.... -++.|..
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFl 254 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFL 254 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHH
Confidence 6665443322 33444444335778999999987644211 111100 0111221
Q ss_pred ----HHHHHHHHHHHhhhhhhhccCCHHHHhcCCCHHHHHHhhhhccCC-----CCCHHHHHhhCCcc--c--------c
Q 013936 285 ----VIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGK-----FETVDAYYRHSSSA--N--------F 345 (433)
Q Consensus 285 ----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~~~~~~y~~~~s~~--~--------~ 345 (433)
++.-++.+.+..|.+.+..+.+.+.- ++....+|-+.+...+.- ..++++-+.+.... + .
T Consensus 255 QlagFmsmNldrH~~aH~~~~~~Lv~~D~~-~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vd 333 (415)
T COG4553 255 QLAGFMSMNLDRHIDAHKDFFLSLVKNDGD-SAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVD 333 (415)
T ss_pred HhhhHhhcChhhhHHHHHHHHHHHHcccch-hHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCC
Confidence 12233333333344333332221111 111222332222111110 11222222222111 0 1
Q ss_pred cCCC-ccceEEEeeCCCCcCCCCCCC--hhHHhcCCC--eEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccCC
Q 013936 346 VRNV-SVPLLCISTLDDPVCTREAIP--WDECRANEK--IILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTSP 419 (433)
Q Consensus 346 l~~i-~~P~Lii~g~dD~ivp~~~~~--~~~~~~~~~--~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~~ 419 (433)
...| ++-++-+-|++|.+....... ..+|...|. .+..+-++.||.|-+.|. .-+..+...+.+|+.....+.
T Consensus 334 p~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGs-rfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 334 PTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGS-RFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred hhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccc-hHHHHHHHHHHHHHHHhCccc
Confidence 1223 578899999999987654221 235555543 344666789999999873 223346678899988776643
No 181
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.15 E-value=0.0013 Score=45.96 Aligned_cols=50 Identities=22% Similarity=0.254 Sum_probs=29.4
Q ss_pred CCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChh
Q 013936 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAA 169 (433)
Q Consensus 111 ~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~ 169 (433)
..+.+.+.+++.||..+.+....++.. ..+....+|+|++.||+.++|..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~---------~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKN---------SSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTT---------CTTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCC---------CcccCCCCCcEEEECCcccChHH
Confidence 467889999999999999987765441 11245678999999999877654
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.09 E-value=0.00058 Score=68.24 Aligned_cols=93 Identities=13% Similarity=0.001 Sum_probs=63.5
Q ss_pred HHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCc--ccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 172 IKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCF--YNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 172 ~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~--~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
|..+++.|.+.||. --|++|..---..+... ...++...+...|+.+.....+.|++++||||||.+++.++....
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~ 235 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVE 235 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhcc
Confidence 37899999999986 35555543211011111 113344678899998888777789999999999999998876321
Q ss_pred ----------C---CCCceEEEEEcCCCCh
Q 013936 250 ----------V---NTPLVGAAAICSPWDL 266 (433)
Q Consensus 250 ----------~---~~~v~~~v~i~~p~~~ 266 (433)
. +..|++.|.+++|+..
T Consensus 236 ~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 236 APAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccCCcchHHHHHHHHHheecccccCC
Confidence 0 0138899999998754
No 183
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.05 E-value=0.0056 Score=54.95 Aligned_cols=104 Identities=15% Similarity=0.089 Sum_probs=67.8
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCC-CCcEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLYA 231 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-~~~i~l 231 (433)
.| +|++||++.+..+.-+..+.+.+.+. |..|.+++. |-| ....+.....+.+..+.+.++..-. ..-+.+
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-----~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-----IKDSSLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-----cchhhhccHHHHHHHHHHHHhcchhccCceEE
Confidence 55 79999996544433356777777764 788888875 333 0111222233555555555552210 223899
Q ss_pred EEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
+|.|.||.++-.++...++ .+|+..|++++|-.
T Consensus 97 vg~SQGglv~Raliq~cd~-ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDN-PPVKNFISLGGPHA 129 (296)
T ss_pred EEEccccHHHHHHHHhCCC-CCcceeEeccCCcC
Confidence 9999999999887777666 58999999998753
No 184
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.02 E-value=0.00069 Score=52.87 Aligned_cols=61 Identities=23% Similarity=0.234 Sum_probs=49.3
Q ss_pred CccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 349 VSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 349 i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
-+.|+|+|+++.||++|.+.... +.+..++.+++..++.||..+..+ ..- ..+.+.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~-~~~~l~~s~lvt~~g~gHg~~~~~--s~C--~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARA-MAARLPGSRLVTVDGAGHGVYAGG--SPC--VDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHH-HHHHCCCceEEEEeccCcceecCC--ChH--HHHHHHHHHHc
Confidence 36999999999999999987655 677788899999999999888631 222 67888899873
No 185
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.00 E-value=0.0018 Score=53.47 Aligned_cols=55 Identities=15% Similarity=0.249 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCC----CCceEEEEEcCCCC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN----TPLVGAAAICSPWD 265 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~----~~v~~~v~i~~p~~ 265 (433)
+.+.+.++.+.++++..++++.|||+||.+|...+....+. .....++..++|--
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 45666777777888888999999999999999776553211 12345555665533
No 186
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.94 E-value=0.0071 Score=57.53 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=73.6
Q ss_pred CcEEEEECCCCCCChhHHHH--HHHHH-HHhCCceEEEEeCCCCCCCCCCCCCccc----------CCChHHHHHHHHHH
Q 013936 154 NPIVVVIPGLTSDSAAAYIK--HLAFK-MAGHGWNVVVSNHRGLGGISLTSDCFYN----------GGWTEDLRRVIDYL 220 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~--~~~~~-l~~~G~~vv~~d~rG~G~s~~~~~~~~~----------~~~~~Dl~~~i~~l 220 (433)
.| |++--|-.|+- +++.. .++.. ..+.+--+|-..+|=+|.|..-..+.+. .....|.++++.++
T Consensus 81 gP-IffYtGNEGdi-e~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 81 GP-IFFYTGNEGDI-EWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred Cc-eEEEeCCcccH-HHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 56 67777876652 33321 12222 2334667889999999988532222111 11237999999999
Q ss_pred HHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 221 HCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 221 ~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
+.... ..|++++|-|.|||++.-+=.++|. -+.|+.+-|+|.
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPv 202 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPV 202 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCce
Confidence 88743 5689999999999999988889998 678888777764
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=96.86 E-value=0.0034 Score=59.22 Aligned_cols=115 Identities=17% Similarity=0.235 Sum_probs=68.3
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHH-HHHHhCCceEEEEeCC--------------CCCCCC---CCCC-Cccc-CCCh
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLA-FKMAGHGWNVVVSNHR--------------GLGGIS---LTSD-CFYN-GGWT 210 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~-~~l~~~G~~vv~~d~r--------------G~G~s~---~~~~-~~~~-~~~~ 210 (433)
+.+-|+++++||.+++....|.+.=+ ....+.|+.++..|-. |-+.+= ...+ .... ..|.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 45679999999998764444433333 3344568888886332 222110 0000 0000 1111
Q ss_pred HHH-HHHHHHHHHhCC-C---CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCChH
Q 013936 211 EDL-RRVIDYLHCQYP-E---VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 211 ~Dl-~~~i~~l~~~~~-~---~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~~ 267 (433)
.-+ .++-..+.+.++ . ..-.++||||||.=|+++|..+|+ +++.+...++..+..
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--hhceecccccccccc
Confidence 111 222234444444 1 268999999999999999999997 799998888766653
No 188
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.82 E-value=0.0023 Score=58.59 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=49.8
Q ss_pred CCCcEEEEECCCCCCChhH-HHHHHHHHHHh--CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCC--C
Q 013936 152 EKNPIVVVIPGLTSDSAAA-YIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP--E 226 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~-y~~~~~~~l~~--~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~ 226 (433)
..+| ||+.||++.+.... -+..+.+.+.+ -|--|.+++. |-+.++.. ...+.....+.+..+.+.++. .| .
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~-~~s~f~~v~~Qv~~vc~~l~~-~p~L~ 79 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV-ENSFFGNVNDQVEQVCEQLAN-DPELA 79 (279)
T ss_dssp SS---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH-HHHHHSHHHHHHHHHHHHHHH--GGGT
T ss_pred CCCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh-hhhHHHHHHHHHHHHHHHHhh-Chhhh
Confidence 3455 79999995432111 12333333333 2666666654 22211000 011111112333344444432 22 1
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
.-++++|+|.||.++-.++.+.+.. +|+-.|++++|-.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~-~V~nlISlggph~ 117 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDP-PVHNLISLGGPHM 117 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS--EEEEEEES--TT
T ss_pred cceeeeeeccccHHHHHHHHHCCCC-CceeEEEecCccc
Confidence 3499999999999999999998753 7999999998653
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.80 E-value=0.0026 Score=57.60 Aligned_cols=55 Identities=15% Similarity=0.157 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCC--CCceEEEEEcCCCC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWD 265 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~--~~v~~~v~i~~p~~ 265 (433)
+++...+..+.+++|+.++++.||||||.+|..++...... .....++..++|--
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 45566666677778899999999999999999777653321 12334555665533
No 190
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.79 E-value=0.012 Score=58.30 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=78.4
Q ss_pred eEEEEcC--CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHH----HH---------
Q 013936 116 RHLFQTP--DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFK----MA--------- 180 (433)
Q Consensus 116 r~~~~~~--DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~----l~--------- 180 (433)
..++... .+..+.++.++..+ ....+|+||.+.|.+|+|.. + -.+.+. +.
T Consensus 13 sGyl~~~~~~~~~lfyw~~~s~~-------------~~~~~Pl~~wlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~l~~ 77 (415)
T PF00450_consen 13 SGYLPVNDNENAHLFYWFFESRN-------------DPEDDPLILWLNGGPGCSSM-W-GLFGENGPFRINPDGPYTLED 77 (415)
T ss_dssp EEEEEECTTTTEEEEEEEEE-SS-------------GGCSS-EEEEEE-TTTB-TH-H-HHHCTTSSEEEETTSTSEEEE
T ss_pred EEEEecCCCCCcEEEEEEEEeCC-------------CCCCccEEEEecCCceeccc-c-ccccccCceEEeecccccccc
Confidence 3456666 56677776665433 34678999999999987633 2 222110 00
Q ss_pred -----hCCceEEEEeCC-CCCCCCCCCCCcccCCC---hHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhh-
Q 013936 181 -----GHGWNVVVSNHR-GLGGISLTSDCFYNGGW---TEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGE- 247 (433)
Q Consensus 181 -----~~G~~vv~~d~r-G~G~s~~~~~~~~~~~~---~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~- 247 (433)
.+-.+++-+|.| |.|-|....+..+..+. ++|+.+++...-.++| ..++++.|-|+||.-+-.++.+
T Consensus 78 n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 78 NPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp -TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred cccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 112678999955 89988765554332222 3455555555555565 5589999999999976654432
Q ss_pred --cCC-----CCCceEEEEEcCCCChH
Q 013936 248 --NGV-----NTPLVGAAAICSPWDLL 267 (433)
Q Consensus 248 --~~~-----~~~v~~~v~i~~p~~~~ 267 (433)
... ...++|+++.++-.+..
T Consensus 158 ~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 158 LQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred hhccccccccccccccceecCcccccc
Confidence 222 23688888776655553
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.64 E-value=0.00082 Score=65.06 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHhCCce------EEEEeCCC-CCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH
Q 013936 170 AYIKHLAFKMAGHGWN------VVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILV 242 (433)
Q Consensus 170 ~y~~~~~~~l~~~G~~------vv~~d~rG-~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~ 242 (433)
.|+..+++.+..-||. -+.+|+|= +-.+. + .......++..++...+.+++.|++++||||||.+..
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e----~--rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSE----E--RDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChh----H--HHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 5788899999888876 45567663 11111 0 0122357888888888888889999999999999999
Q ss_pred HHHhhcCCCC------CceEEEEEcCCCCh
Q 013936 243 KYLGENGVNT------PLVGAAAICSPWDL 266 (433)
Q Consensus 243 ~~a~~~~~~~------~v~~~v~i~~p~~~ 266 (433)
.++...++.. -|++.+.+++||-.
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 9998877621 37788888877644
No 192
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.57 E-value=0.02 Score=52.69 Aligned_cols=108 Identities=12% Similarity=0.080 Sum_probs=62.1
Q ss_pred CCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCC----ceEEEEeCCCCCCCCCCCCCcccC-CChHH-HHHHHHHHHHh
Q 013936 150 NCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG----WNVVVSNHRGLGGISLTSDCFYNG-GWTED-LRRVIDYLHCQ 223 (433)
Q Consensus 150 ~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G----~~vv~~d~rG~G~s~~~~~~~~~~-~~~~D-l~~~i~~l~~~ 223 (433)
...+.|++++.||-.-- +..=+...++.+...| -.+|.+|.- .........+.. ...+. ..+++=++.++
T Consensus 94 ~~~k~pvl~~~DG~~~~-~~g~i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~ 169 (299)
T COG2382 94 PLEKYPVLYLQDGQDWF-RSGRIPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEER 169 (299)
T ss_pred ccccccEEEEeccHHHH-hcCChHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhcc
Confidence 34578999999994211 1111223455555544 334444432 211111122221 12222 34566678888
Q ss_pred CCC----CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 224 YPE----VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 224 ~~~----~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
||. ..=+++|-|+||.+++..+..+|+ .+-.+++.|+.
T Consensus 170 yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps 211 (299)
T COG2382 170 YPTSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGS 211 (299)
T ss_pred CcccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCc
Confidence 873 235899999999999999999998 57666666554
No 193
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.56 E-value=0.044 Score=52.72 Aligned_cols=152 Identities=10% Similarity=0.071 Sum_probs=91.3
Q ss_pred CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC-ChHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhhhhc
Q 013936 225 PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW-DLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR 303 (433)
Q Consensus 225 ~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 303 (433)
.-.++++.|.|==|..++..++..+ ||++++-+.-.. +......... +.|.......+..|...
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~---RV~aivP~Vid~LN~~~~l~h~y-----~~yG~~ws~a~~dY~~~------- 234 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDP---RVKAIVPIVIDVLNMKANLEHQY-----RSYGGNWSFAFQDYYNE------- 234 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCc---ceeEEeeEEEccCCcHHHHHHHH-----HHhCCCCccchhhhhHh-------
Confidence 3568999999999999998887443 699988776432 3322111100 01110000011111110
Q ss_pred cCCHHHHhcCCCHHHHHHhhhhccCCCCCHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEE
Q 013936 304 LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILA 383 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~ 383 (433)
.++..+ +-+...+..+..++..+..++++|-++|+|..|++..++.......+......+.
T Consensus 235 ------------------gi~~~l-~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 235 ------------------GITQQL-DTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred ------------------Cchhhc-CCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 000000 0011122233344556668889999999999999999887766555666678899
Q ss_pred EcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 384 TTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 384 ~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
++|+.+|-+-.. -+...+..|+..+..
T Consensus 296 ~vPN~~H~~~~~-------~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 296 YVPNAGHSLIGS-------DVVQSLRAFYNRIQN 322 (367)
T ss_pred eCCCCCcccchH-------HHHHHHHHHHHHHHc
Confidence 999999964331 366889999988765
No 194
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.54 E-value=0.047 Score=46.88 Aligned_cols=111 Identities=22% Similarity=0.243 Sum_probs=66.7
Q ss_pred CCCcEEEEECCCCCCChhH---HH---HHHHHHH------HhCCceEEEEeCCCCCCCCCCCCCcccCC----ChHHHHH
Q 013936 152 EKNPIVVVIPGLTSDSAAA---YI---KHLAFKM------AGHGWNVVVSNHRGLGGISLTSDCFYNGG----WTEDLRR 215 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~---y~---~~~~~~l------~~~G~~vv~~d~rG~G~s~~~~~~~~~~~----~~~Dl~~ 215 (433)
...-+.+++||...+-... +. ..+...+ ...+=+|.++-+.|+--=........... -..++..
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHH
Confidence 3455789999985432211 11 1122211 11234677777776532100001111111 2257888
Q ss_pred HHHHHHHhC-CCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 216 VIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 216 ~i~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
+++-|+... +..++.++|||+|+.++-..+...+. .+..+|++++|-
T Consensus 97 f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG 144 (177)
T PF06259_consen 97 FLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPG 144 (177)
T ss_pred HHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCC
Confidence 888888777 77889999999999999877776444 688899988763
No 195
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.54 E-value=0.0042 Score=53.78 Aligned_cols=55 Identities=18% Similarity=0.271 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc--CC--CCCceEEEEEcCCCC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN--GV--NTPLVGAAAICSPWD 265 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~--~~--~~~v~~~v~i~~p~~ 265 (433)
.++...++....+.|+.+++++|+|.||.++...+... +. ..+|.++++++.|..
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 56777777777889999999999999999999998771 11 126999999988754
No 196
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.43 E-value=0.021 Score=51.20 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=59.2
Q ss_pred CCcEEEEECCC-CCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCCh----HHHHHHHHHHHHhCC--
Q 013936 153 KNPIVVVIPGL-TSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT----EDLRRVIDYLHCQYP-- 225 (433)
Q Consensus 153 ~~p~vvllHG~-~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~----~Dl~~~i~~l~~~~~-- 225 (433)
++.+|=|+-|. -|......++.+.+.|+++||.|++.-+.- .+-+...+ +..+.+++.+..+..
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44566666662 233333344899999999999999986631 11111111 334455555555432
Q ss_pred --CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEc
Q 013936 226 --EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAIC 261 (433)
Q Consensus 226 --~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~ 261 (433)
.-|++-+|||||+-+-+.+....+.+ -++-++++
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~--r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVE--RAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCc--ccceEEEe
Confidence 24789999999999988666555432 34555554
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.42 E-value=0.15 Score=46.28 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=33.3
Q ss_pred HHHHhCC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcC
Q 013936 219 YLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICS 262 (433)
Q Consensus 219 ~l~~~~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~ 262 (433)
+|.++|. ..+-.++|||+||.+++..+..+|+ .+...+++|+
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SP 170 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISP 170 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecc
Confidence 3444443 3468999999999999999999988 6888888876
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.39 E-value=0.0075 Score=54.10 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCC--CCCceEEEEEcCCC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV--NTPLVGAAAICSPW 264 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~--~~~v~~~v~i~~p~ 264 (433)
....+.++.+.+.+++ ++.+.|||.||++|...+....+ ..+|..+....+|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3455555566666765 59999999999999987776432 23788998887763
No 199
>COG3150 Predicted esterase [General function prediction only]
Probab=96.27 E-value=0.038 Score=46.12 Aligned_cols=39 Identities=13% Similarity=0.047 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
.++.+.++.+.....+....+||-|+||..+..+..+++
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC
Confidence 455555555556665556899999999999998888775
No 200
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.21 E-value=0.034 Score=54.41 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=79.9
Q ss_pred CCCCcEEEEECCCCCCChhHHH----HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcc-------cCCChHHHHHHHHH
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYI----KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFY-------NGGWTEDLRRVIDY 219 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~----~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~-------~~~~~~Dl~~~i~~ 219 (433)
.++.|+.|+|-|= |.-.+.|+ ..+...+.+.|-.|+.+.||=+|.|....+... ......|++++|+.
T Consensus 83 ~~~gPiFLmIGGE-gp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 83 KPGGPIFLMIGGE-GPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred cCCCceEEEEcCC-CCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 3567888888763 22111111 134556667799999999999998753322211 11234799999999
Q ss_pred HHHhCC---CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 220 LHCQYP---EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 220 l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
+..+++ +.|.+..|-|+-|.++.-+=..+|+ .+.|.|+-|+|..
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--l~~GsvASSapv~ 208 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--LTVGSVASSAPVL 208 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--hheeeccccccee
Confidence 998874 2389999999999999988888999 7999998888863
No 201
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.18 E-value=0.072 Score=52.87 Aligned_cols=112 Identities=17% Similarity=0.130 Sum_probs=64.1
Q ss_pred CCCCcEEEEECCCCCCChhH-HHHHHHH-------------HHH------hCCceEEEEe-CCCCCCCCCCCCCcccCC-
Q 013936 151 CEKNPIVVVIPGLTSDSAAA-YIKHLAF-------------KMA------GHGWNVVVSN-HRGLGGISLTSDCFYNGG- 208 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~-y~~~~~~-------------~l~------~~G~~vv~~d-~rG~G~s~~~~~~~~~~~- 208 (433)
....|+|+.+-|.+|+|... .+..... .+. .+-.+++-+| .-|.|-|....+......
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 45679999999999876421 0010000 110 0126788899 557888754433222211
Q ss_pred -ChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcC--------CCCCceEEEEEcC
Q 013936 209 -WTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENG--------VNTPLVGAAAICS 262 (433)
Q Consensus 209 -~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~--------~~~~v~~~v~i~~ 262 (433)
..+|+.+++...-+++| ..+++++|.|.||..+-.+|.+-- ....++|+++-.+
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 12455555554444555 478999999999987665554321 1125777776554
No 202
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.16 E-value=0.0097 Score=52.17 Aligned_cols=82 Identities=26% Similarity=0.231 Sum_probs=51.6
Q ss_pred ceEEEEeCCCCCCCCCC-CC----CcccCCChHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHhhcCC----CCC
Q 013936 184 WNVVVSNHRGLGGISLT-SD----CFYNGGWTEDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGV----NTP 253 (433)
Q Consensus 184 ~~vv~~d~rG~G~s~~~-~~----~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~~~----~~~ 253 (433)
-+|+++=+|=..-.... .. .....--..|+.++.++-.+++ .++|++++|||.|++++.+++.+.=+ ..+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~r 125 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKR 125 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHhh
Confidence 58888888863221111 11 1111122378988887665554 57799999999999999999887522 125
Q ss_pred ceEEEEEcCCCC
Q 013936 254 LVGAAAICSPWD 265 (433)
Q Consensus 254 v~~~v~i~~p~~ 265 (433)
+.++-+++.+..
T Consensus 126 LVAAYliG~~v~ 137 (207)
T PF11288_consen 126 LVAAYLIGYPVT 137 (207)
T ss_pred hheeeecCcccc
Confidence 666666665433
No 203
>PLN02454 triacylglycerol lipase
Probab=96.14 E-value=0.012 Score=57.10 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHhCCCCc--EEEEEechhHHHHHHHHhh
Q 013936 210 TEDLRRVIDYLHCQYPEVP--LYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 210 ~~Dl~~~i~~l~~~~~~~~--i~lvG~S~GG~ia~~~a~~ 247 (433)
.+++.+.++.+.++|++.+ |++.||||||.+|+..|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3577777888888888766 9999999999999987754
No 204
>PLN02162 triacylglycerol lipase
Probab=96.04 E-value=0.017 Score=56.52 Aligned_cols=55 Identities=15% Similarity=0.233 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHh---hcCCC---CCceEEEEEcCCCC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLG---ENGVN---TPLVGAAAICSPWD 265 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~---~~~~~---~~v~~~v~i~~p~~ 265 (433)
..+.+.++.+..++|+.++++.|||+||.+|+..++ ..+.. .++.+++..++|--
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 345666666667788889999999999999997654 22221 13567777777643
No 205
>PLN00413 triacylglycerol lipase
Probab=96.02 E-value=0.018 Score=56.51 Aligned_cols=54 Identities=17% Similarity=0.253 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh---c-CCC--CCceEEEEEcCCCC
Q 013936 212 DLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE---N-GVN--TPLVGAAAICSPWD 265 (433)
Q Consensus 212 Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~---~-~~~--~~v~~~v~i~~p~~ 265 (433)
++.+.++.+.+++|+.++++.|||+||++|...+.. + +.+ .++.++...++|--
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 566777777788999999999999999999977642 1 111 14567777777643
No 206
>PLN02209 serine carboxypeptidase
Probab=95.92 E-value=0.12 Score=51.27 Aligned_cols=113 Identities=14% Similarity=0.115 Sum_probs=64.8
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHH----------------HHHh------CCceEEEEe-CCCCCCCCCCCCCcccC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAF----------------KMAG------HGWNVVVSN-HRGLGGISLTSDCFYNG 207 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~----------------~l~~------~G~~vv~~d-~rG~G~s~~~~~~~~~~ 207 (433)
....|+|+.+-|.+|+|.. + -.+.+ .+.. +-.+++-+| ..|.|-|-...+.....
T Consensus 65 ~~~~Pl~lWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~ 142 (437)
T PLN02209 65 PQEDPLIIWLNGGPGCSCL-S-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTS 142 (437)
T ss_pred CCCCCEEEEECCCCcHHHh-h-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC
Confidence 3467999999999988632 2 11111 0100 125788888 55688775433322211
Q ss_pred --CChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhc---C----C-CCCceEEEEEcCCCC
Q 013936 208 --GWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGEN---G----V-NTPLVGAAAICSPWD 265 (433)
Q Consensus 208 --~~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~---~----~-~~~v~~~v~i~~p~~ 265 (433)
...+|+.++++..-+++| ..++++.|.|.||.-+-.++.+- . + ...++|+++.++..+
T Consensus 143 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 143 DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 122455555544445555 46899999999998666554432 1 1 125778776665444
No 207
>PLN02934 triacylglycerol lipase
Probab=95.74 E-value=0.026 Score=55.78 Aligned_cols=54 Identities=15% Similarity=0.230 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh---cCCC---CCceEEEEEcCCC
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE---NGVN---TPLVGAAAICSPW 264 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~---~~~~---~~v~~~v~i~~p~ 264 (433)
+.+...++.+.+++|+.++++.|||+||.+|...+.. ..+. .++..++..++|-
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPR 364 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPR 364 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCC
Confidence 3577777888888999999999999999999977643 1111 1345567776663
No 208
>PLN02408 phospholipase A1
Probab=95.26 E-value=0.037 Score=52.93 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHhhcCC---CCCceEEEEEcCCC
Q 013936 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPW 264 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~--~i~lvG~S~GG~ia~~~a~~~~~---~~~v~~~v~i~~p~ 264 (433)
+++.+.++.+.+++++. .|++.|||+||.+|+..+..... +.+...++..++|-
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPR 240 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPR 240 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCC
Confidence 56667777777888764 49999999999999977654322 11233466666653
No 209
>PLN02571 triacylglycerol lipase
Probab=95.06 E-value=0.069 Score=51.91 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHhh
Q 013936 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~--~i~lvG~S~GG~ia~~~a~~ 247 (433)
+++.+.+..+.+++++. +|++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 56666666677777654 69999999999999977654
No 210
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.04 E-value=0.064 Score=51.16 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=58.6
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEec
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS 235 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S 235 (433)
.-||.-|=+| ....=+....+|+++|+.||-+|-.-+=-++.+ .....+|+..++++-..+....++.++|+|
T Consensus 262 ~av~~SGDGG--Wr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rt-----Pe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGG--WRDLDKEVAEALQKQGVPVVGVDSLRYFWSERT-----PEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCc--hhhhhHHHHHHHHHCCCceeeeehhhhhhccCC-----HHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4466666543 223336788899999999999986543222211 124558999999999998888899999999
Q ss_pred hhHHHHHH
Q 013936 236 IGANILVK 243 (433)
Q Consensus 236 ~GG~ia~~ 243 (433)
+|+=+.-.
T Consensus 335 fGADvlP~ 342 (456)
T COG3946 335 FGADVLPF 342 (456)
T ss_pred ccchhhHH
Confidence 99988653
No 211
>PLN02847 triacylglycerol lipase
Probab=94.53 E-value=0.08 Score=53.34 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh
Q 013936 212 DLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 212 Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
++...+..+..++|+-+++++||||||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344445555667888899999999999999876543
No 212
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.40 E-value=0.072 Score=54.94 Aligned_cols=109 Identities=21% Similarity=0.113 Sum_probs=64.5
Q ss_pred CcEEEEECCCCC--CChhHH-HHHHHHHHHhCCceEEEEeCCC--CCC-CCCCCCCcccCCChHHHHHHHHHHHHh---C
Q 013936 154 NPIVVVIPGLTS--DSAAAY-IKHLAFKMAGHGWNVVVSNHRG--LGG-ISLTSDCFYNGGWTEDLRRVIDYLHCQ---Y 224 (433)
Q Consensus 154 ~p~vvllHG~~g--~s~~~y-~~~~~~~l~~~G~~vv~~d~rG--~G~-s~~~~~~~~~~~~~~Dl~~~i~~l~~~---~ 224 (433)
.|++|++||.+- ++...+ .......+..+..-||.+++|= +|. +........+.+. .|...+++|+++. +
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl-~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGL-FDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccH-HHHHHHHHHHHHHHHhc
Confidence 799999999531 111111 1223334445568888999983 332 1111111122222 5999999999876 2
Q ss_pred C--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 225 P--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 225 ~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
+ ..+|.++|||.||..+.........+..+..+|..++.
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 2 35799999999999987554432222246666666654
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.26 E-value=0.093 Score=50.28 Aligned_cols=88 Identities=19% Similarity=0.143 Sum_probs=47.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC-CCCCCCCccc--CCChHHHHHHHHHHHHhCCCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG-ISLTSDCFYN--GGWTEDLRRVIDYLHCQYPEV 227 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~-s~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~~~ 227 (433)
+.+.-.||+.||+.| ....|+...+....++ +-=.++..||+-+ .-.+...... .+..+++.+. +... .-.
T Consensus 77 ~k~~HLvVlthGi~~-~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~---~~~~-si~ 150 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHG-ADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKET---LYDY-SIE 150 (405)
T ss_pred cCCceEEEecccccc-ccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhh---hhcc-ccc
Confidence 344568999999987 3455667677776654 2111444455332 2222222211 1222333332 2221 135
Q ss_pred cEEEEEechhHHHHHHH
Q 013936 228 PLYAVGTSIGANILVKY 244 (433)
Q Consensus 228 ~i~lvG~S~GG~ia~~~ 244 (433)
+|-.+|||+||.++...
T Consensus 151 kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeeecCCeeeeEE
Confidence 79999999999987643
No 214
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.22 E-value=0.11 Score=47.15 Aligned_cols=53 Identities=23% Similarity=0.351 Sum_probs=39.7
Q ss_pred ChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 209 WTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 209 ~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+..+..+++..+++.||+.+|.+.|||+||.+|..+-.+++- + +|+..+|-+.
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl--P---~VaFesPGd~ 310 (425)
T COG5153 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL--P---VVAFESPGDA 310 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC--c---eEEecCchhh
Confidence 335667777788899999999999999999999866666654 2 3455566554
No 215
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.22 E-value=0.11 Score=47.15 Aligned_cols=53 Identities=23% Similarity=0.351 Sum_probs=39.7
Q ss_pred ChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 209 WTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 209 ~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+..+..+++..+++.||+.+|.+.|||+||.+|..+-.+++- + +|+..+|-+.
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl--P---~VaFesPGd~ 310 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL--P---VVAFESPGDA 310 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC--c---eEEecCchhh
Confidence 335667777788899999999999999999999866666654 2 3455566554
No 216
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=93.99 E-value=0.12 Score=49.68 Aligned_cols=108 Identities=19% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCccc----CCChHHHHHHHHHHHHhCCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN----GGWTEDLRRVIDYLHCQYPE 226 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~----~~~~~Dl~~~i~~l~~~~~~ 226 (433)
+-++|+|+.--|..-+ ....-......+ +-+-+.+.+|=+|.|... +..+. ...++|.+.+++.++.-|++
T Consensus 60 ~~drPtV~~T~GY~~~-~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~iY~~ 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVS-TSPRRSEPTQLL---DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPIYPG 134 (448)
T ss_pred CCCCCeEEEecCcccc-cCccccchhHhh---ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhhccC
Confidence 5578999999998543 332212233333 347899999999998643 33332 23458999999999999966
Q ss_pred CcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
+.+--|.|=||+.++.|=.-+|+ .|++.|...+|.+.
T Consensus 135 -kWISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 135 -KWISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred -CceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 69999999999999987777888 59999998888764
No 217
>PLN02310 triacylglycerol lipase
Probab=93.98 E-value=0.12 Score=50.23 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhCC----CCcEEEEEechhHHHHHHHHhhcCCC--CCceEEEEEcCCCC
Q 013936 211 EDLRRVIDYLHCQYP----EVPLYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWD 265 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~----~~~i~lvG~S~GG~ia~~~a~~~~~~--~~v~~~v~i~~p~~ 265 (433)
+.+.+.+..+.+.|+ ..+|.+.||||||.+|+..+...... .....++..++|--
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 445555555655553 45799999999999999766442110 01234666776643
No 218
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.96 E-value=0.86 Score=43.50 Aligned_cols=243 Identities=12% Similarity=0.016 Sum_probs=118.8
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCC--CCcE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP--EVPL 229 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--~~~i 229 (433)
..+|+|+++ ||.|+ .+.++........+.||.++.+-.+-+--....+.+. -...+....+..+.+.+. ..|+
T Consensus 37 s~k~Iv~~~-gWag~-~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~---~sl~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIVVLL-GWAGA-IDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRI---LSLSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccccEEEEe-eeccc-cchhHHHHHHHHhcCCceEEEecCccccccccccccc---chhhHHHHHHHHHhhhccCCcCce
Confidence 344655555 77676 4556677788888899999999877644322221111 111334344444444433 5578
Q ss_pred EEEEechhHHHHHHHH-hh---c-CCCC-CceEEEEEcCCCChHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHhhhhhh
Q 013936 230 YAVGTSIGANILVKYL-GE---N-GVNT-PLVGAAAICSPWDLLICDRFINRRLV--QKCYDRVIAIGLRGFAQLHQSTV 301 (433)
Q Consensus 230 ~lvG~S~GG~ia~~~a-~~---~-~~~~-~v~~~v~i~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~ 301 (433)
+.--+|+||...+... .+ + +... ...+.+..+.|............... ...+.....+.. .+...+
T Consensus 112 ~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-----~~i~~~ 186 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLN-----YHITLL 186 (350)
T ss_pred EEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcC-----eEEEEE
Confidence 8889999998877543 11 1 2211 34556666666543221110000000 000000000000 000000
Q ss_pred hccCCHHHHhcCCCHHHHHHhhhhccCCCC-CHHHHHhhCCcccccCCCccceEEEeeCCCCcCCCCCCChh---HHhcC
Q 013936 302 ARLADWEGITKSRSIRDFDNHATRVLGKFE-TVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWD---ECRAN 377 (433)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~y~~~~s~~~~l~~i~~P~Lii~g~dD~ivp~~~~~~~---~~~~~ 377 (433)
....... ....+.........+.. ...++|. ..-.....+.+.+.+..|.++|.+.+... .....
T Consensus 187 ~~~~~~~------~~~~~~~~~~~~~~~r~~~~~~r~~-----~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g 255 (350)
T KOG2521|consen 187 TMAGNEG------GAYLLGPLAEKISMSRKYHFLDRYE-----EQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKG 255 (350)
T ss_pred Eeeeccc------chhhhhhhhhccccccchHHHHHHH-----hhhhcccccceeecCCccccccHHHHHHHHHHHHhcC
Confidence 0000000 00000000000001111 1111121 11112256788888999999998876653 22355
Q ss_pred CCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhccC
Q 013936 378 EKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (433)
Q Consensus 378 ~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~~ 418 (433)
-++..+-..++-|++++.. .+..+.+...+|++.....
T Consensus 256 ~~v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 256 VNVKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred ceEEEeeccCccceeeecc---CcHHHHHHHHHHHHhcccc
Confidence 6677777788899998874 2224668999999987653
No 219
>PLN02324 triacylglycerol lipase
Probab=93.71 E-value=0.1 Score=50.62 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHhh
Q 013936 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~--~i~lvG~S~GG~ia~~~a~~ 247 (433)
+.+.+.|..+.++|++. .|.+.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 56666677777888753 69999999999999977643
No 220
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.60 E-value=0.11 Score=49.76 Aligned_cols=60 Identities=22% Similarity=0.392 Sum_probs=44.4
Q ss_pred cccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhh---cCCC-CCceEEEEEcCC
Q 013936 204 FYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE---NGVN-TPLVGAAAICSP 263 (433)
Q Consensus 204 ~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~---~~~~-~~v~~~v~i~~p 263 (433)
.+...|.+.+.+.++.+...+|+-.|.+.|||+||.+|...|.. .+.. ..-.+++..+.|
T Consensus 148 ~~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 148 AYTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred hhccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 33445557888999999999999999999999999999876543 2221 134567777766
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.06 E-value=0.14 Score=50.97 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhCC----CCcEEEEEechhHHHHHHHHhh
Q 013936 211 EDLRRVIDYLHCQYP----EVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~----~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
+++.+.|..+.+.|+ ...|.+.||||||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 344445555555553 3469999999999999976644
No 222
>PLN02802 triacylglycerol lipase
Probab=93.02 E-value=0.15 Score=50.67 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEechhHHHHHHHHhh
Q 013936 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~--~i~lvG~S~GG~ia~~~a~~ 247 (433)
+++.+-+..+.++|++. .|++.|||+||.+|+..+..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 45666666677777653 69999999999999976654
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=93.00 E-value=0.68 Score=45.87 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=63.2
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHH---HhCC---------------ceEEEEe-CCCCCCCCC--CCCCcccCCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKM---AGHG---------------WNVVVSN-HRGLGGISL--TSDCFYNGGW 209 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l---~~~G---------------~~vv~~d-~rG~G~s~~--~~~~~~~~~~ 209 (433)
..++|+++.+-|.+|+|.. + -.+.+.= ...| -.++-+| .-|.|-|.. ........+.
T Consensus 98 p~~rPvi~wlNGGPGcSS~-~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSV-T-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhh-h-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhcc
Confidence 4578999999999998633 2 2221100 0001 2577788 567777763 2222333456
Q ss_pred hHHHHHHHHHHHHhCC-----CCcEEEEEechhHHHHHHHHhhc
Q 013936 210 TEDLRRVIDYLHCQYP-----EVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 210 ~~Dl~~~i~~l~~~~~-----~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
.+|+..+.+.+.+.+| .++.+++|-|+||.-+-.+|.+-
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 6899999988887655 34899999999999888776653
No 224
>PLN02719 triacylglycerol lipase
Probab=92.90 E-value=0.15 Score=50.59 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhCCC-----CcEEEEEechhHHHHHHHHhh
Q 013936 211 EDLRRVIDYLHCQYPE-----VPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~-----~~i~lvG~S~GG~ia~~~a~~ 247 (433)
+++.+.+..+.++|++ .+|.+.|||+||.+|+..|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 5677777777777864 379999999999999976643
No 225
>PLN02753 triacylglycerol lipase
Probab=92.57 E-value=0.18 Score=50.32 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCC-----CCcEEEEEechhHHHHHHHHh
Q 013936 211 EDLRRVIDYLHCQYP-----EVPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~-----~~~i~lvG~S~GG~ia~~~a~ 246 (433)
+++.+.|+.+..+|+ +.+|.+.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 566666777777775 358999999999999997664
No 226
>PLN02761 lipase class 3 family protein
Probab=92.41 E-value=0.19 Score=50.07 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHhCC------CCcEEEEEechhHHHHHHHHh
Q 013936 210 TEDLRRVIDYLHCQYP------EVPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 210 ~~Dl~~~i~~l~~~~~------~~~i~lvG~S~GG~ia~~~a~ 246 (433)
.+++.+.|..+.++|+ ..+|.+.||||||.+|+..|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3567777777777773 346999999999999997664
No 227
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.18 E-value=1.8 Score=43.06 Aligned_cols=131 Identities=18% Similarity=0.204 Sum_probs=76.6
Q ss_pred eEEEEcC--CCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHH-----hC------
Q 013936 116 RHLFQTP--DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMA-----GH------ 182 (433)
Q Consensus 116 r~~~~~~--DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~-----~~------ 182 (433)
..+++.. +|..+.+++++... .....|+||.+-|.+|+|.- ..+..++- ..
T Consensus 46 sGYv~v~~~~~~~LFYwf~eS~~-------------~P~~dPlvLWLnGGPGCSSl---~G~~~E~GPf~v~~~G~tL~~ 109 (454)
T KOG1282|consen 46 SGYVTVNESEGRQLFYWFFESEN-------------NPETDPLVLWLNGGPGCSSL---GGLFEENGPFRVKYNGKTLYL 109 (454)
T ss_pred cceEECCCCCCceEEEEEEEccC-------------CCCCCCEEEEeCCCCCccch---hhhhhhcCCeEEcCCCCccee
Confidence 3456666 57777777766543 34568999999999998732 12222210 01
Q ss_pred -------CceEEEEeCC-CCCCCCCCCCCccc---CCChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhh-
Q 013936 183 -------GWNVVVSNHR-GLGGISLTSDCFYN---GGWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGE- 247 (433)
Q Consensus 183 -------G~~vv~~d~r-G~G~s~~~~~~~~~---~~~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~- 247 (433)
--+++-+|.| |-|-|=..++..+. .+.++|..+++...-+++| ..++++.|-|.+|..+-.+|.+
T Consensus 110 N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I 189 (454)
T KOG1282|consen 110 NPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEI 189 (454)
T ss_pred CCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHH
Confidence 1246666665 56665433332222 2233676666655555665 6789999999999766555543
Q ss_pred ---cC--C--CCCceEEEEEcC
Q 013936 248 ---NG--V--NTPLVGAAAICS 262 (433)
Q Consensus 248 ---~~--~--~~~v~~~v~i~~ 262 (433)
.. . ...++|+++-.+
T Consensus 190 ~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 190 LKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred HhccccccCCcccceEEEecCc
Confidence 21 1 125777775444
No 228
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.71 E-value=0.68 Score=41.60 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=47.1
Q ss_pred CceEEEEeCCC-CCCCCCCCCCcccCCChHHHHHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHhhcCC---CC-CceE
Q 013936 183 GWNVVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGV---NT-PLVG 256 (433)
Q Consensus 183 G~~vv~~d~rG-~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~~~---~~-~v~~ 256 (433)
|+++..++++. ++-........+.....+-...+.+.++... ...+++++|+|+|+.++...+.+... .. .-..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 67788888887 3322111111122112222333333444322 56789999999999999987766422 11 2446
Q ss_pred EEEEcCCCCh
Q 013936 257 AAAICSPWDL 266 (433)
Q Consensus 257 ~v~i~~p~~~ 266 (433)
.|+++.|-..
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 7888876443
No 229
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=91.41 E-value=0.71 Score=46.28 Aligned_cols=101 Identities=16% Similarity=0.106 Sum_probs=62.9
Q ss_pred CCCcEEEEECCCC-----CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh---
Q 013936 152 EKNPIVVVIPGLT-----SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ--- 223 (433)
Q Consensus 152 ~~~p~vvllHG~~-----g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~--- 223 (433)
+++-+|+-|||.+ .-|++.|.+.++..| |.-++.+|+.=.... ......+++--+..|+...
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEa-------PFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEA-------PFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCC-------CCCcHHHHHHHHHHHHhcCHHH
Confidence 3556888999942 124567877666654 789999998533222 2223446666666666543
Q ss_pred --CCCCcEEEEEechhHHHHHHHHhh---cCCCCCceEEEEEcCC
Q 013936 224 --YPEVPLYAVGTSIGANILVKYLGE---NGVNTPLVGAAAICSP 263 (433)
Q Consensus 224 --~~~~~i~lvG~S~GG~ia~~~a~~---~~~~~~v~~~v~i~~p 263 (433)
.-+.+|+++|-|.||++.+..+.+ ++-. .-+|+++.-+|
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR-vPDGl~laY~p 507 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGVR-VPDGLMLAYPP 507 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCCC-CCCceEEecCh
Confidence 126789999999999987654433 2321 24566655444
No 230
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.66 E-value=0.65 Score=39.06 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=38.6
Q ss_pred HHHHHHHh-CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCCCh
Q 013936 216 VIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (433)
Q Consensus 216 ~i~~l~~~-~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~~~ 266 (433)
.-.|+.+. .|.+ ..+-|.||||..+.++.-++|+ ...++|++|+.++.
T Consensus 90 yerYv~eEalpgs-~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYda 138 (227)
T COG4947 90 YERYVIEEALPGS-TIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHhhcCCC-ccccccchhhhhhhhhheeChh--HhhhheeecceeeH
Confidence 33455544 4544 6788999999999999999999 78999999998876
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.18 E-value=0.72 Score=44.05 Aligned_cols=44 Identities=23% Similarity=0.196 Sum_probs=33.8
Q ss_pred CCCCcEEEEEechhHHHHHHHHhhcCCC---CCceEEEEEcCCCChH
Q 013936 224 YPEVPLYAVGTSIGANILVKYLGENGVN---TPLVGAAAICSPWDLL 267 (433)
Q Consensus 224 ~~~~~i~lvG~S~GG~ia~~~a~~~~~~---~~v~~~v~i~~p~~~~ 267 (433)
.+.+|+.+||||+|+-+....+.+-.+. ..|..+++++.|....
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 3677999999999999988766553322 2489999999988763
No 232
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=88.97 E-value=10 Score=41.89 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=58.8
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC-CCCCCCCcccCCChHHHH-HHHHHHHHhCCCCc
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG-ISLTSDCFYNGGWTEDLR-RVIDYLHCQYPEVP 228 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~-s~~~~~~~~~~~~~~Dl~-~~i~~l~~~~~~~~ 228 (433)
....|++.|+|.+.|.. ... ..++..+. .|-+|- +. +.-.....++++ ..|+.+++-.|..|
T Consensus 2120 ~se~~~~Ffv~pIEG~t-t~l-~~la~rle----------~PaYglQ~T----~~vP~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFT-TAL-ESLASRLE----------IPAYGLQCT----EAVPLDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred cccCCceEEEeccccch-HHH-HHHHhhcC----------Ccchhhhcc----ccCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 34567899999997643 322 44444332 122221 11 111112335544 44677888889999
Q ss_pred EEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
..++|+|+|+.++..++..-.+..-...+|++.+.
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 99999999999999888765443334557777653
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.49 E-value=1.8 Score=41.27 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=48.4
Q ss_pred eEEEEeCC-CCCCCCCCCCCcccC--CChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcC--------C
Q 013936 185 NVVVSNHR-GLGGISLTSDCFYNG--GWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENG--------V 250 (433)
Q Consensus 185 ~vv~~d~r-G~G~s~~~~~~~~~~--~~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~--------~ 250 (433)
+++-+|.| |.|-|-...+..+.. ..++|+..+++..-+++| ..++++.|-|.||.-+-.++.+-- .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 788775443322221 122666666665556665 578999999999987665554321 1
Q ss_pred CCCceEEEEEcC
Q 013936 251 NTPLVGAAAICS 262 (433)
Q Consensus 251 ~~~v~~~v~i~~ 262 (433)
...++|+++-.+
T Consensus 83 ~inLkGi~IGNg 94 (319)
T PLN02213 83 PINLQGYMLGNP 94 (319)
T ss_pred ceeeeEEEeCCC
Confidence 125677764443
No 234
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=87.41 E-value=4.7 Score=34.48 Aligned_cols=42 Identities=17% Similarity=0.270 Sum_probs=35.3
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
...+|.+|.+-|+.|+..+.....+.+.|.++|++++++|=-
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGD 60 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGD 60 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecCh
Confidence 346688999999999887777777888899999999999843
No 235
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=86.72 E-value=1.3 Score=35.66 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=24.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCc
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW 184 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~ 184 (433)
++.+|.|+-+||++|...+..-+-+++.+-+.|.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 5688999999999998655444556666666663
No 236
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=86.37 E-value=5.4 Score=37.25 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=64.4
Q ss_pred CCCCcEEEEECCCCC---CChhHHHHHHHHHHHh-CCceEEEEeCCCCCCCCCC----------CC---CcccCCChHHH
Q 013936 151 CEKNPIVVVIPGLTS---DSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLT----------SD---CFYNGGWTEDL 213 (433)
Q Consensus 151 ~~~~p~vvllHG~~g---~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~s~~~----------~~---~~~~~~~~~Dl 213 (433)
+..+.+|+++-|... ...-.-+-.+...+.+ .|-+++++=-.|.|..... .. ..+-.+....+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 455667777777422 1110112345556665 6899999999998755221 10 11222344678
Q ss_pred HHHHHHHHHhC-CCCcEEEEEechhHHHHHHHHhhc
Q 013936 214 RRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 214 ~~~i~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
.++..++...| |+..|++.|+|-|+.++--+|+..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHHH
Confidence 88888888876 688999999999999998777754
No 237
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=84.41 E-value=0.93 Score=39.17 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=43.7
Q ss_pred CCC-ccceEEEeeCCCCcCCCCCC--ChhHHhcCCC--eEEEEcCCCCeeeeccCC-cCCCCcHHHHHHHHHHH
Q 013936 347 RNV-SVPLLCISTLDDPVCTREAI--PWDECRANEK--IILATTRHGGHLAFYEGI-TAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 347 ~~i-~~P~Lii~g~dD~ivp~~~~--~~~~~~~~~~--~~l~~~~~gGH~~~~e~~-~~~~~w~~~~v~~Fl~~ 414 (433)
+.| ++++|-|-|+.|.|+..... ...++...|. ..-.+.+++||.|.+.|. +.+ -+...|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~--~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWRE--EIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhh--hhhHHHHHHHHh
Confidence 345 67888899999999987522 1235554443 445677889999999872 122 244667788764
No 238
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=84.36 E-value=7.1 Score=36.36 Aligned_cols=94 Identities=20% Similarity=0.236 Sum_probs=55.6
Q ss_pred cEEEEECCCCCCChhH----HHHHHHHHH-HhCCceEEEEeCCCCCCC--------CCCC----CCcccCCChHHHHHHH
Q 013936 155 PIVVVIPGLTSDSAAA----YIKHLAFKM-AGHGWNVVVSNHRGLGGI--------SLTS----DCFYNGGWTEDLRRVI 217 (433)
Q Consensus 155 p~vvllHG~~g~s~~~----y~~~~~~~l-~~~G~~vv~~d~rG~G~s--------~~~~----~~~~~~~~~~Dl~~~i 217 (433)
.+||++=|...+.... -+..+.+.+ ...+-..+++=.+|.|.. .... ...+-.+..+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 3566666654332211 123344555 223445566667777761 1100 1111234457788888
Q ss_pred HHHHHhC-CCCcEEEEEechhHHHHHHHHhhc
Q 013936 218 DYLHCQY-PEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 218 ~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
.++.+.+ |+.+|+++|+|-|+.+|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 8886665 577899999999999998887664
No 239
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=84.06 E-value=7.8 Score=33.97 Aligned_cols=57 Identities=28% Similarity=0.362 Sum_probs=40.7
Q ss_pred CCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCc-eEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh
Q 013936 150 NCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ 223 (433)
Q Consensus 150 ~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~-~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~ 223 (433)
.+.+.-+|+++||....+.+.| ..+-.-+.+.|| .|++...-|+. ++..+++++++.
T Consensus 134 l~k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~yP----------------~~d~vi~~l~~~ 191 (265)
T COG4822 134 LNKDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGYP----------------LVDTVIEYLRKN 191 (265)
T ss_pred cCcCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCCC----------------cHHHHHHHHHHc
Confidence 3456678999999876665666 556666778899 77777666553 277788888775
No 240
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=79.58 E-value=4.6 Score=33.94 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=32.9
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
+|.||++-|+.|+..+...+.+.+.|.+.|+.|+.+|-.-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~ 40 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDN 40 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcc
Confidence 4679999999998888777888889999999999998654
No 241
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=77.51 E-value=3.2 Score=32.74 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=17.8
Q ss_pred EEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCC
Q 013936 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDS 167 (433)
Q Consensus 118 ~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s 167 (433)
+.+.-||..|.+-...+. +++...+||+|||+|+-
T Consensus 71 f~t~I~g~~iHFih~rs~---------------~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 71 FKTEIDGLDIHFIHVRSK---------------RPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp EEEEETTEEEEEEEE--S----------------TT-EEEEEE--SS--G
T ss_pred eeEEEeeEEEEEEEeeCC---------------CCCCeEEEEECCCCccH
Confidence 333346888877655432 34455689999999864
No 242
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=77.23 E-value=31 Score=26.57 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH--HHHhh
Q 013936 170 AYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILV--KYLGE 247 (433)
Q Consensus 170 ~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~--~~a~~ 247 (433)
.....+.+.+..+|+-.-.+.+|..|.+.. .....+..+-=...++.+.+.+|+.++++||=|--.=.-. .++.+
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~---~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLS---GLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCcccc---ccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHH
Confidence 333666667777888888888888865421 2222222233456778888999999999999886443222 35677
Q ss_pred cCCCCCceEEEE
Q 013936 248 NGVNTPLVGAAA 259 (433)
Q Consensus 248 ~~~~~~v~~~v~ 259 (433)
+|+ +|.++.+
T Consensus 88 ~P~--~i~ai~I 97 (100)
T PF09949_consen 88 FPG--RILAIYI 97 (100)
T ss_pred CCC--CEEEEEE
Confidence 888 6776643
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=76.25 E-value=30 Score=34.93 Aligned_cols=88 Identities=15% Similarity=0.072 Sum_probs=56.6
Q ss_pred HHHhCCceEEEEeCCCCCCCCCCCCCccc----------CCChHHHHHHHHHHHHh-CC--CCcEEEEEechhHHHHHHH
Q 013936 178 KMAGHGWNVVVSNHRGLGGISLTSDCFYN----------GGWTEDLRRVIDYLHCQ-YP--EVPLYAVGTSIGANILVKY 244 (433)
Q Consensus 178 ~l~~~G~~vv~~d~rG~G~s~~~~~~~~~----------~~~~~Dl~~~i~~l~~~-~~--~~~i~lvG~S~GG~ia~~~ 244 (433)
....+||.++.-|. ||..+.......+. .....+...+-+.|.+. |. ...-+..|.|-||--+++.
T Consensus 54 ~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~ 132 (474)
T PF07519_consen 54 TALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMA 132 (474)
T ss_pred hhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHH
Confidence 44567999998886 66655431010010 11112333333344333 22 3458999999999999999
Q ss_pred HhhcCCCCCceEEEEEcCCCChHH
Q 013936 245 LGENGVNTPLVGAAAICSPWDLLI 268 (433)
Q Consensus 245 a~~~~~~~~v~~~v~i~~p~~~~~ 268 (433)
|.++|+ ..+|+++-+|.++...
T Consensus 133 AQryP~--dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 133 AQRYPE--DFDGILAGAPAINWTH 154 (474)
T ss_pred HHhChh--hcCeEEeCCchHHHHH
Confidence 999999 6999999888876643
No 244
>PF03283 PAE: Pectinacetylesterase
Probab=73.82 E-value=3.7 Score=39.80 Aligned_cols=35 Identities=26% Similarity=0.245 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHh-CC-CCcEEEEEechhHHHHHHHH
Q 013936 211 EDLRRVIDYLHCQ-YP-EVPLYAVGTSIGANILVKYL 245 (433)
Q Consensus 211 ~Dl~~~i~~l~~~-~~-~~~i~lvG~S~GG~ia~~~a 245 (433)
..+.++++++..+ .+ .+++++.|.|.||.-++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 5688899999887 54 35799999999999988644
No 245
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=70.33 E-value=11 Score=30.95 Aligned_cols=44 Identities=23% Similarity=0.416 Sum_probs=33.1
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT 200 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~ 200 (433)
+|.+-|..++..+..++.++..|.++||+|.++=+-+||+....
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d 45 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEID 45 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccC
Confidence 46666877777888999999999999999998888788776543
No 246
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.26 E-value=16 Score=30.66 Aligned_cols=75 Identities=23% Similarity=0.261 Sum_probs=45.5
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCc-eEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~-~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
.||++-||+ +..+.. .++ ....++ -++++|++...- + -|+.+ | +.+.+|.+
T Consensus 13 LIvyFaGwg-tpps~v-~HL---ilpeN~dl~lcYDY~dl~l-----d--------fDfsA--------y--~hirlvAw 64 (214)
T COG2830 13 LIVYFAGWG-TPPSAV-NHL---ILPENHDLLLCYDYQDLNL-----D--------FDFSA--------Y--RHIRLVAW 64 (214)
T ss_pred EEEEEecCC-CCHHHH-hhc---cCCCCCcEEEEeehhhcCc-----c--------cchhh--------h--hhhhhhhh
Confidence 788899994 443322 322 223445 467788875421 1 01111 1 23779999
Q ss_pred chhHHHHHHHHhhcCCCCCceEEEEEcC
Q 013936 235 SIGANILVKYLGENGVNTPLVGAAAICS 262 (433)
Q Consensus 235 S~GG~ia~~~a~~~~~~~~v~~~v~i~~ 262 (433)
|||-.+|-+.+... +++.++++.+
T Consensus 65 SMGVwvAeR~lqg~----~lksatAiNG 88 (214)
T COG2830 65 SMGVWVAERVLQGI----RLKSATAING 88 (214)
T ss_pred hHHHHHHHHHHhhc----cccceeeecC
Confidence 99999998888766 4667777754
No 247
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=68.07 E-value=30 Score=33.24 Aligned_cols=64 Identities=9% Similarity=0.116 Sum_probs=45.4
Q ss_pred CCCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHHhcc
Q 013936 347 RNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (433)
Q Consensus 347 ~~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~~~~ 417 (433)
.++.+|-.+++|..|.+.+++..............+.++|+..|..-.. .....+.-|++.+..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~-------~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ-------FIKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH-------HHHHHHHHHHHHHhc
Confidence 6788999999999999988887665444555567788999999953221 244556666665544
No 248
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.75 E-value=3.7 Score=41.53 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=35.0
Q ss_pred HHHHHHHHHh-C-CCCcEEEEEechhHHHHHHHHhhc-----CCC----CCceEEEEEcCCCCh
Q 013936 214 RRVIDYLHCQ-Y-PEVPLYAVGTSIGANILVKYLGEN-----GVN----TPLVGAAAICSPWDL 266 (433)
Q Consensus 214 ~~~i~~l~~~-~-~~~~i~lvG~S~GG~ia~~~a~~~-----~~~----~~v~~~v~i~~p~~~ 266 (433)
.++++.+.+. . .++|++.+||||||.++=+.+... |+- ..-.|++.++.|...
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 3555555543 2 378999999999998887665432 221 135788888888554
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=66.21 E-value=14 Score=36.99 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=33.5
Q ss_pred CCCCcEEEEEechhHHHHHHHHhh---cCCCCCceEEEEEcCCCChH
Q 013936 224 YPEVPLYAVGTSIGANILVKYLGE---NGVNTPLVGAAAICSPWDLL 267 (433)
Q Consensus 224 ~~~~~i~lvG~S~GG~ia~~~a~~---~~~~~~v~~~v~i~~p~~~~ 267 (433)
.+.+||.+||+|+|+-+....+.+ ..+-.-|.-++++++|....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 467899999999999998865543 22222588899999987764
No 250
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=65.79 E-value=8.1 Score=35.55 Aligned_cols=40 Identities=13% Similarity=0.286 Sum_probs=34.9
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
...|+||++.|+-++.....++.+...+-.+|++|+++..
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 3569999999998888888889999999999999999844
No 251
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=63.90 E-value=15 Score=34.39 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=42.2
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC--CcccCCChHHHHHHHHHHHHhCCCCcE-----E
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSD--CFYNGGWTEDLRRVIDYLHCQYPEVPL-----Y 230 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~i-----~ 230 (433)
|++-|..|--. .+.+..|.++||.|+++|..-.|....-.. ..+..+...|-+.+-+-+.+..+..-+ .
T Consensus 3 iLVtGGAGYIG----SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 3 VLVTGGAGYIG----SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred EEEecCcchhH----HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 44555445432 357788889999999999998776443222 123334444544444444444443333 3
Q ss_pred EEEech
Q 013936 231 AVGTSI 236 (433)
Q Consensus 231 lvG~S~ 236 (433)
.||-|+
T Consensus 79 ~VgESv 84 (329)
T COG1087 79 SVGESV 84 (329)
T ss_pred ccchhh
Confidence 456664
No 252
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=63.52 E-value=29 Score=34.66 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=57.5
Q ss_pred cCCCCCcEEEEECCCCCCChhHH-HHHHHHHHHhCCc-eEEEEeCCCCCCCCCCCCCcccC--CChHHHHHHHHHHHHh-
Q 013936 149 LNCEKNPIVVVIPGLTSDSAAAY-IKHLAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNG--GWTEDLRRVIDYLHCQ- 223 (433)
Q Consensus 149 ~~~~~~p~vvllHG~~g~s~~~y-~~~~~~~l~~~G~-~vv~~d~rG~G~s~~~~~~~~~~--~~~~Dl~~~i~~l~~~- 223 (433)
|++-+-|..|.+-|.-. .+.+ .-.+++.| |- -.+.-|.|=-|++ +|.. ..-+-+.++|+.-.+.
T Consensus 284 PGD~KPPL~VYFSGyR~--aEGFEgy~MMk~L---g~PfLL~~DpRleGGa------FYlGs~eyE~~I~~~I~~~L~~L 352 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP--AEGFEGYFMMKRL---GAPFLLIGDPRLEGGA------FYLGSDEYEQGIINVIQEKLDYL 352 (511)
T ss_pred CcCCCCCeEEeeccCcc--cCcchhHHHHHhc---CCCeEEeeccccccce------eeeCcHHHHHHHHHHHHHHHHHh
Confidence 45556688899999753 2211 01233333 33 3445577766654 2221 1223455555443333
Q ss_pred -CCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCCC
Q 013936 224 -YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (433)
Q Consensus 224 -~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p~ 264 (433)
+....+++-|.|||..-|+.|++.... .+|.++-|.
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 234569999999999999999987633 355566443
No 253
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=63.10 E-value=14 Score=37.40 Aligned_cols=63 Identities=13% Similarity=0.014 Sum_probs=43.8
Q ss_pred ccceEEEeeCCCCcCCCCCCChh---HH--------hcCCCeEEEEcCCCCeeeeccCCcCCCCcHHHHHHHHHHH
Q 013936 350 SVPLLCISTLDDPVCTREAIPWD---EC--------RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~~~~~---~~--------~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~~v~~Fl~~ 414 (433)
--.+|+.||..|+++|+...... .. ......++.++|+.||+.--.+. ...=....+.+|.++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~--~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGP--DPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCC--CCCCHHHHHHHHHhC
Confidence 46899999999999998743221 11 12346899999999999865542 222256778888774
No 254
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=61.45 E-value=10 Score=34.19 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=34.9
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
.+.|+||++-|+-++....-++.+...+-.+|++|.++..+
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 34699999999988877888899999999999999987544
No 255
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=59.87 E-value=1.5e+02 Score=30.40 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=64.9
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC-CCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcE
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG-~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i 229 (433)
+.+-|.|+-+-|=+|+..+..++.++..+.+.-. -+.+| .--+.+...+.....+.+|+.++|+-.+... --+
T Consensus 65 d~PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti----~~i~GPiTvvsgK~RRiTflEcp~Dl~~miDvaKIaD--LVl 138 (1077)
T COG5192 65 DLPPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTI----DEIRGPITVVSGKTRRITFLECPSDLHQMIDVAKIAD--LVL 138 (1077)
T ss_pred cCCCCeEEEeecCCCCChhHHHHHHHHHHHHhhh----hccCCceEEeecceeEEEEEeChHHHHHHHhHHHhhh--eeE
Confidence 4455777778888888788889999998876421 12233 0011122234444556699999998766532 011
Q ss_pred E----EEEechhHHHHHHHHhhcCCCCCceEEEEE
Q 013936 230 Y----AVGTSIGANILVKYLGENGVNTPLVGAAAI 260 (433)
Q Consensus 230 ~----lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i 260 (433)
. -+|+-|-.+--++++..++-. +|-|++.-
T Consensus 139 LlIdgnfGfEMETmEFLnil~~HGmP-rvlgV~Th 172 (1077)
T COG5192 139 LLIDGNFGFEMETMEFLNILISHGMP-RVLGVVTH 172 (1077)
T ss_pred EEeccccCceehHHHHHHHHhhcCCC-ceEEEEee
Confidence 1 248889999989999888753 56666643
No 256
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=59.44 E-value=83 Score=27.83 Aligned_cols=85 Identities=18% Similarity=0.236 Sum_probs=51.1
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeCCCCCCCCC-----CCCCcccCCChHHHHHHHHHH------
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISL-----TSDCFYNGGWTEDLRRVIDYL------ 220 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~rG~G~s~~-----~~~~~~~~~~~~Dl~~~i~~l------ 220 (433)
..+.|++++--.+ ....|...+.+.+.+. |+.+..++... .... ..+..+..+ .+...+++.+
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G--G~~~~~~~~l~~~~l~ 104 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG--GNTFNLLAQWREHGLD 104 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC--chHHHHHHHHHHcCHH
Confidence 4567999987654 3557778888889999 99999998754 1110 011122211 1222222222
Q ss_pred ---HHhCCCCcEEEEEechhHHHHHH
Q 013936 221 ---HCQYPEVPLYAVGTSIGANILVK 243 (433)
Q Consensus 221 ---~~~~~~~~i~lvG~S~GG~ia~~ 243 (433)
++.+ .+...++|.|.|+++...
T Consensus 105 ~~l~~~~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 105 AILKAAL-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHH-HCCCEEEEECHhHHhhCC
Confidence 2222 224789999999999775
No 257
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=57.50 E-value=10 Score=35.06 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=52.1
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCc-------eEEEEeCCCCCCCC---CCCCC-cccC--C--ChHHHHHHHHHHH
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGW-------NVVVSNHRGLGGIS---LTSDC-FYNG--G--WTEDLRRVIDYLH 221 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~-------~vv~~d~rG~G~s~---~~~~~-~~~~--~--~~~Dl~~~i~~l~ 221 (433)
-|++.|. |+..-...+.++..+.+.|. +++.+|..|.=..+ ....+ .|-. . ...++.++++.++
T Consensus 27 ~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 3556675 43333444556666666787 89999999932211 11110 1110 0 1235555555443
Q ss_pred HhCCCCcEEEEEech-hHHHHHHHHhhcCCCCCceEEEEEcCCCC
Q 013936 222 CQYPEVPLYAVGTSI-GANILVKYLGENGVNTPLVGAAAICSPWD 265 (433)
Q Consensus 222 ~~~~~~~i~lvG~S~-GG~ia~~~a~~~~~~~~v~~~v~i~~p~~ 265 (433)
+=+++|.|- ||...-..+......+.=--+..++.|-.
T Consensus 106 ------ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 106 ------PTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred ------CCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 468999995 77665555444332111112344566654
No 258
>PRK00889 adenylylsulfate kinase; Provisional
Probab=55.76 E-value=29 Score=29.48 Aligned_cols=37 Identities=24% Similarity=0.334 Sum_probs=30.7
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
+.++.+.|++|+..+...+.++..+...|+.+..+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3488888999998888888888888888888888864
No 259
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=55.62 E-value=33 Score=29.40 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=34.9
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
.+.|+-+=|..|+..+..++.++..+..+|++|-++-+.|+|.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 3446666698888888888999999988899999998877764
No 260
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=55.39 E-value=6.8 Score=35.25 Aligned_cols=40 Identities=15% Similarity=0.273 Sum_probs=32.3
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
..|+||++-|+.++....-++.+...+-.+|++|.++..+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4679999999998888888888888888899999999765
No 261
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=55.05 E-value=21 Score=33.42 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=22.3
Q ss_pred CCCCCcEEEEECCCCCCChhHHHH-HHHHHHHhCC
Q 013936 150 NCEKNPIVVVIPGLTSDSAAAYIK-HLAFKMAGHG 183 (433)
Q Consensus 150 ~~~~~p~vvllHG~~g~s~~~y~~-~~~~~l~~~G 183 (433)
+.+.+|.++=+||++|+. ..|+. -+++.+.+.|
T Consensus 105 ~~p~KPLvLSfHG~tGTG-KN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTG-KNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCCeEEEecCCCCCc-hhHHHHHHHHHHHhcc
Confidence 457899999999999874 44543 3445554444
No 262
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=54.91 E-value=19 Score=33.09 Aligned_cols=42 Identities=12% Similarity=0.331 Sum_probs=35.4
Q ss_pred CCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 150 NCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 150 ~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
+...+|++|++-|..|+....+++.+..++.+++-..+++|+
T Consensus 14 ~~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 14 GAIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred ccccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 345678899999999998889999999999988777777776
No 263
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=54.01 E-value=73 Score=28.76 Aligned_cols=93 Identities=19% Similarity=0.144 Sum_probs=51.9
Q ss_pred CCcEEEEECCCCC-CChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCC-CCCCcc-cCCChHHHHHH------HHHHHHh
Q 013936 153 KNPIVVVIPGLTS-DSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL-TSDCFY-NGGWTEDLRRV------IDYLHCQ 223 (433)
Q Consensus 153 ~~p~vvllHG~~g-~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~-~~~~~~-~~~~~~Dl~~~------i~~l~~~ 223 (433)
..|.|+|++--.. .....|++.+.+.+.+.|+.+..++...--.... ..+..+ ..|.+--+.+. .+.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 3577999997542 2346788888888889999988887652100000 011111 22333222211 1122222
Q ss_pred CCCCcEEEEEechhHHHHHHHHh
Q 013936 224 YPEVPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 224 ~~~~~i~lvG~S~GG~ia~~~a~ 246 (433)
.. .-..++|.|.|++++.....
T Consensus 110 ~~-~G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 110 VK-NGTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred HH-CCCEEEEECHHHHhhhccce
Confidence 21 23789999999999775444
No 264
>PRK07933 thymidylate kinase; Validated
Probab=51.84 E-value=39 Score=29.99 Aligned_cols=42 Identities=14% Similarity=0.234 Sum_probs=35.4
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~ 198 (433)
+|.+=|+-|+..+.-.+.++++|.++|+.|+....+++|+++
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~~ 43 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRSV 43 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 466778888878888899999999999999999999777543
No 265
>PRK03846 adenylylsulfate kinase; Provisional
Probab=51.40 E-value=95 Score=26.97 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=31.6
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
..+|.+|.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 4567899999998887777777777778777888888863
No 266
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=50.92 E-value=33 Score=28.75 Aligned_cols=38 Identities=18% Similarity=0.310 Sum_probs=30.7
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
+.+-|..|+..+.....++..+.++|++|.++.+-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 44558877777778888999998899999999976554
No 267
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=50.86 E-value=87 Score=26.23 Aligned_cols=75 Identities=16% Similarity=0.276 Sum_probs=45.9
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
+.-++-.|.+|.....+...+...+.....+++++. -|.-... .. .....+.+++.++++.+++..|..++++++
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~-~G~ND~~--~~-~~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLF-LGTNDIG--KE-VSSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEE-eccccCC--CC-CCHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 345677888887666665555455656667676664 2322211 11 112234578888898888887777777775
No 268
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=50.45 E-value=84 Score=27.39 Aligned_cols=65 Identities=15% Similarity=0.216 Sum_probs=39.4
Q ss_pred EEECCCCCCChhHHHHHHHHHHHh----CCceEEEEeCCCCCCCCCCC-CCcc---cCCChHHHHHHHHHHHH
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAG----HGWNVVVSNHRGLGGISLTS-DCFY---NGGWTEDLRRVIDYLHC 222 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~----~G~~vv~~d~rG~G~s~~~~-~~~~---~~~~~~Dl~~~i~~l~~ 222 (433)
+++-|-+|+..+.+++.++..+.. .+.+++++|..|.+-..... +... .....+++.++++++..
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVE 113 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHH
Confidence 556677788888888888888877 68999999999764333211 1111 22344666666666544
No 269
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=49.93 E-value=35 Score=28.80 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=34.9
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
.|+=+-|+.++.....+..+++.|.++||+|.++-+-+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 3666778877777788899999999999999999999998
No 270
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=49.13 E-value=98 Score=29.55 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~ 198 (433)
|+.....+..+++.+.++|++|.++ -||+|+..
T Consensus 61 GtGKTP~v~~L~~~l~~~g~~~~il-sRGYg~~~ 93 (325)
T PRK00652 61 GTGKTPVVIALAEQLQARGLKPGVV-SRGYGGKL 93 (325)
T ss_pred CCChHHHHHHHHHHHHHCCCeEEEE-CCCCCCCc
Confidence 5557788888999999999987665 78998754
No 271
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=48.43 E-value=1.5e+02 Score=28.18 Aligned_cols=93 Identities=17% Similarity=0.275 Sum_probs=58.8
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHH--------------HHHhCCceEEEEeCC-CCCCCCCCCCCcccCCCh---HHH
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAF--------------KMAGHGWNVVVSNHR-GLGGISLTSDCFYNGGWT---EDL 213 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~--------------~l~~~G~~vv~~d~r-G~G~s~~~~~~~~~~~~~---~Dl 213 (433)
..+|..+.+-|-+|.|...| -.+-+ .+.+ -.++.+|.| |.|-|-......|..... .|+
T Consensus 29 s~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl 105 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDL 105 (414)
T ss_pred cCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHH
Confidence 56788999999888776544 22211 2222 356666665 677765443444544333 455
Q ss_pred HHHHHHHHHhC---CCCcEEEEEechhHHHHHHHHhh
Q 013936 214 RRVIDYLHCQY---PEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 214 ~~~i~~l~~~~---~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
.+.++.+-..+ ...|++++--|.||-++.+++.+
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 55555444433 36799999999999999877654
No 272
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=47.85 E-value=1.2e+02 Score=28.42 Aligned_cols=38 Identities=29% Similarity=0.397 Sum_probs=27.4
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
++++++|...+........+++.|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 46666765433345666789999999999998887654
No 273
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=47.63 E-value=24 Score=25.57 Aligned_cols=44 Identities=18% Similarity=0.326 Sum_probs=33.4
Q ss_pred CCChHHHHHHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcCC
Q 013936 207 GGWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 207 ~~~~~Dl~~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
.++...+.+.++|++.+.+ .+++.++|-|-|=.+|.+.++..+.
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~ 63 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGA 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcC
Confidence 3566889999999988532 3579999999999999888877654
No 274
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=45.47 E-value=97 Score=28.30 Aligned_cols=92 Identities=18% Similarity=0.255 Sum_probs=50.1
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCce-EEEEeCCCCCCC--CCC------CCC-cccCCChHHHH------H
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWN-VVVSNHRGLGGI--SLT------SDC-FYNGGWTEDLR------R 215 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~-vv~~d~rG~G~s--~~~------~~~-~~~~~~~~Dl~------~ 215 (433)
+..|-|++++--.+ ....|.+...+.+.+.|+. |..++.+..... +.. ... ....+.+.-+. .
T Consensus 26 ~~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~ 104 (250)
T TIGR02069 26 GEDAIIVIITSASE-EPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTP 104 (250)
T ss_pred CCCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCc
Confidence 34567899996544 4556778888888888984 666666432111 100 011 11223332222 1
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHH
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYL 245 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a 245 (433)
+.+.|++.+.. -.+++|.|.|+++....+
T Consensus 105 l~~~l~~~~~~-G~vi~G~SAGA~i~~~~~ 133 (250)
T TIGR02069 105 LLDRLRKRVHE-GIILGGTSAGAAVMSDTM 133 (250)
T ss_pred HHHHHHHHHHc-CCeEEEccHHHHhcccce
Confidence 11223333322 378999999999976544
No 275
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=45.23 E-value=42 Score=24.52 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=25.2
Q ss_pred EECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 159 VIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 159 llHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
++-|..|...+.....++..+++.|++|+++|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 34455566667777889999999999999999
No 276
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=44.91 E-value=84 Score=26.31 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=43.1
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
.-++-.|++|.........+.+.+......++++-. |.-.. ... .....+.+.+.++++.+++..|+.++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~~-G~ND~--~~~-~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLYA-GDNDL--ASG-RTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEEE-ecCcc--cCC-CCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 347888998876555444444444443555555522 22111 000 1122345778889999988888778888763
No 277
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=44.64 E-value=45 Score=32.70 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=41.5
Q ss_pred CCccceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccCCcCC-CCcHHHHHHHHHH
Q 013936 348 NVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAK-SLWWVRAVNVFLD 413 (433)
Q Consensus 348 ~i~~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~~~~~-~~w~~~~v~~Fl~ 413 (433)
+-.--+|+|.|++||..-.. ........+....+.|+|+|..-+.++.+. +......|.+|..
T Consensus 349 ~~~~rmlFVYG~nDPW~A~~---f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAEP---FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred hCCCeEEEEeCCCCCcccCc---cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 33457999999999976422 222345678889999999999888765332 2233455555654
No 278
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=44.58 E-value=68 Score=30.64 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=27.2
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCC
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL 199 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~ 199 (433)
|+.....+..+++.|.++|+++.++ .||+|+...
T Consensus 47 GTGKTP~v~~L~~~L~~~G~~~~Il-SRGYg~~~~ 80 (326)
T PF02606_consen 47 GTGKTPLVIWLARLLQARGYRPAIL-SRGYGRKSK 80 (326)
T ss_pred CCCchHHHHHHHHHHHhcCCceEEE-cCCCCCCCC
Confidence 4556788889999999999997666 679998654
No 279
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=43.19 E-value=43 Score=28.69 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=24.9
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
.+..+=+|...+.....++..++++|++|+++|.=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 34444445556666677899999999999999993
No 280
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=42.82 E-value=49 Score=32.88 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=32.9
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
..|.+|++-|.+|...+.....++..+.++|++|.+++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 457899999999988877778888888889999888766
No 281
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=42.80 E-value=1.7 Score=40.13 Aligned_cols=95 Identities=22% Similarity=0.180 Sum_probs=52.0
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC----------CCCCCCCCCCCCcccCCCh---HHHHHHHH
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH----------RGLGGISLTSDCFYNGGWT---EDLRRVID 218 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~----------rG~G~s~~~~~~~~~~~~~---~Dl~~~i~ 218 (433)
...|.+++.||+++.... . ......+...++.+...+. +|++.+............. .++...-.
T Consensus 47 ~~~p~v~~~h~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQ-S-LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY 124 (299)
T ss_pred ccCceEEeccCccccccC-c-chHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHH
Confidence 578889999999765443 2 2377788888888777764 3333222211111111000 11111111
Q ss_pred HHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 219 YLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 219 ~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
...... ..+....|.++|+..+..++...+
T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 125 RLLGAS-LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHhhh-cCcceEEEEEeeccchHHHhhcch
Confidence 111111 246788888888888887777665
No 282
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=42.72 E-value=29 Score=30.66 Aligned_cols=35 Identities=17% Similarity=0.452 Sum_probs=31.3
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
+|++.|.+|+....+.+.+++.|.+++++|+...-
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 68899999988888999999999999999988755
No 283
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=42.62 E-value=85 Score=26.73 Aligned_cols=53 Identities=13% Similarity=0.163 Sum_probs=40.9
Q ss_pred HHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechh
Q 013936 179 MAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIG 237 (433)
Q Consensus 179 l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~G 237 (433)
|.+.|++.+++|.=.+=- ..+......++.+.++.+++.++..++.++--|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~------~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLT------PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCC------CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 778999999999865421 12223345789999999999988778999999986
No 284
>CHL00175 minD septum-site determining protein; Validated
Probab=42.58 E-value=65 Score=29.79 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=30.3
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
..+|.+.-|-+|...+.....++..|++.|++|+++|.=
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 346777776666666666678889999999999999874
No 285
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=41.78 E-value=84 Score=27.85 Aligned_cols=90 Identities=24% Similarity=0.272 Sum_probs=50.4
Q ss_pred CCCcEEEEECCCCCCChh-HHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-----CCccc-CCChHHHHHHH------H
Q 013936 152 EKNPIVVVIPGLTSDSAA-AYIKHLAFKMAGHGWNVVVSNHRGLGGISLTS-----DCFYN-GGWTEDLRRVI------D 218 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~-~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~-----~~~~~-~~~~~Dl~~~i------~ 218 (433)
+.++.|.|+|--++++.. .|+....+.|.+.|..+.-++.----.....+ +-.|- .|.+-++...+ +
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~ 109 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDD 109 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHH
Confidence 346789999987554322 38888888999999998887663211111000 11111 23443332222 1
Q ss_pred HHHHhCCCCcEEEEEechhHHHHH
Q 013936 219 YLHCQYPEVPLYAVGTSIGANILV 242 (433)
Q Consensus 219 ~l~~~~~~~~i~lvG~S~GG~ia~ 242 (433)
-|+++. ..-...+|+|.|++++.
T Consensus 110 iIr~~v-k~G~~YiG~SAGA~ia~ 132 (224)
T COG3340 110 IIRERV-KAGTPYIGWSAGANIAG 132 (224)
T ss_pred HHHHHH-HcCCceEEeccCceeec
Confidence 122222 12367899999999865
No 286
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=40.90 E-value=2.1e+02 Score=26.58 Aligned_cols=40 Identities=23% Similarity=0.143 Sum_probs=28.4
Q ss_pred CcEEEEEechhHHHHHHHHhhcCC-CCCceEEEEEcCCCCh
Q 013936 227 VPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWDL 266 (433)
Q Consensus 227 ~~i~lvG~S~GG~ia~~~a~~~~~-~~~v~~~v~i~~p~~~ 266 (433)
.++++.|-|+|+.-+........+ ..++.|++..++|...
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 369999999999887654332221 1269999999888665
No 287
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=40.80 E-value=88 Score=29.51 Aligned_cols=68 Identities=21% Similarity=0.234 Sum_probs=43.6
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC----CCCCCCccc----CCChHHHHHHHHHHHHhCCCCc
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI----SLTSDCFYN----GGWTEDLRRVIDYLHCQYPEVP 228 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s----~~~~~~~~~----~~~~~Dl~~~i~~l~~~~~~~~ 228 (433)
.|+|-| ++| .+-+.++.++.++||+|++-=+-.-|.- ...+++..+ -...+.+.++.+++++..++..
T Consensus 31 ~VlITG--CDS--GfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 31 AVLITG--CDS--GFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred EEEEec--CCc--HHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 688887 443 5567899999999999987543322210 111233222 1234789999999999876555
No 288
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=40.00 E-value=1.1e+02 Score=28.48 Aligned_cols=72 Identities=19% Similarity=0.186 Sum_probs=44.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCC-----CC-----C-cccCCChHHHHHHHHHHHHhCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT-----SD-----C-FYNGGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~-----~~-----~-~~~~~~~~Dl~~~i~~l~~~~~ 225 (433)
+-++-|++|. ...| +++.|.++||.|.-+..|-.-.+... .+ + ....+...|...++.-+....|
T Consensus 4 ~ALITGITGQ-DGsY---La~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 4 VALITGITGQ-DGSY---LAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred eEEEecccCC-chHH---HHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 5688899885 5556 78999999999999998854332221 00 0 1123444567777777766655
Q ss_pred CCcEEEE
Q 013936 226 EVPLYAV 232 (433)
Q Consensus 226 ~~~i~lv 232 (433)
+.-..+.
T Consensus 80 dEIYNLa 86 (345)
T COG1089 80 DEIYNLA 86 (345)
T ss_pred hhheecc
Confidence 4433333
No 289
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=39.57 E-value=45 Score=33.73 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=37.1
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
...|+||++-|+-|+..+.-++.+...+..+|++|+.+..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 467999999999988888888999999999999999998764
No 290
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=39.07 E-value=65 Score=24.21 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=22.3
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
+.+|+|++|.+ |. .+ ...+..|.+.||. +.++.|
T Consensus 60 ~~~~ivv~C~~--G~-rs---~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAK--EG-SS---QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCC--CC-cH---HHHHHHHHHcCce--eEEeCC
Confidence 45688888875 32 22 3466778889998 455554
No 291
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=38.84 E-value=1.1e+02 Score=28.90 Aligned_cols=44 Identities=23% Similarity=0.353 Sum_probs=31.3
Q ss_pred CCcEEEEECC--CCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 013936 153 KNPIVVVIPG--LTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (433)
Q Consensus 153 ~~p~vvllHG--~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~ 198 (433)
+.|+| .+-. .+|+.....+..+++.+.++|+++.++ -||+|+..
T Consensus 27 ~vPVI-sVGNitvGGTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~ 72 (311)
T TIGR00682 27 PVPVV-IVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVL-SRGYGSKT 72 (311)
T ss_pred CCCEE-EEeccccCCcChHHHHHHHHHHHHHCCCEEEEE-CCCCCCCC
Confidence 45644 3432 335557788889999999999998766 67999854
No 292
>PRK06696 uridine kinase; Validated
Probab=38.27 E-value=66 Score=28.63 Aligned_cols=39 Identities=23% Similarity=0.417 Sum_probs=32.2
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
..+|.||.+-|.+|+..+...+.+++.|.+.|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 457899999999998888888888888877788887744
No 293
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=38.09 E-value=63 Score=30.72 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=33.0
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~ 189 (433)
+++|.|+++=|..|.....-+-.++.++.++|++|+.-
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vlla 173 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLA 173 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEE
Confidence 46799999999988877777888999999999999875
No 294
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=37.10 E-value=51 Score=31.25 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=16.6
Q ss_pred EEEEEechhHHHHHHHHhh
Q 013936 229 LYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~ 247 (433)
=.+.|.|+||.+++.++..
T Consensus 34 D~i~GTStGgiIA~~la~g 52 (312)
T cd07212 34 DWIAGTSTGGILALALLHG 52 (312)
T ss_pred cEEEeeChHHHHHHHHHcC
Confidence 4799999999999998863
No 295
>PLN02924 thymidylate kinase
Probab=37.07 E-value=97 Score=27.64 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=34.9
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
...+.+|.+=|..|+..+.-.+.+.+.+..+|+.|+....++
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 345668888899998888888899999999999998877765
No 296
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK).
Probab=36.91 E-value=1.5e+02 Score=25.36 Aligned_cols=39 Identities=23% Similarity=0.263 Sum_probs=29.5
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
||.+-|.+|+..+...+.+...+...|.++.++..=++=
T Consensus 1 ii~i~G~sgsGKttla~~l~~~l~~~~~~~~~i~~Ddf~ 39 (179)
T cd02028 1 VVGIAGPSGSGKTTFAKKLSNQLRVNGIGPVVISLDDYY 39 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEehhhcc
Confidence 467778888878888788888887778888888665533
No 297
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=36.73 E-value=98 Score=25.04 Aligned_cols=15 Identities=27% Similarity=0.512 Sum_probs=11.9
Q ss_pred HHHHHHhCCceEEEE
Q 013936 175 LAFKMAGHGWNVVVS 189 (433)
Q Consensus 175 ~~~~l~~~G~~vv~~ 189 (433)
.+..|.+.||+|+++
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 356788899999876
No 298
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=36.57 E-value=76 Score=31.38 Aligned_cols=45 Identities=22% Similarity=0.312 Sum_probs=0.0
Q ss_pred cccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEE
Q 013936 145 NRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (433)
Q Consensus 145 ~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~ 189 (433)
+.+..-....|+||++-|+.|+......-.++.++.++|+.|.++
T Consensus 90 ~~~~~l~~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllV 134 (451)
T COG0541 90 NSELNLAKKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLV 134 (451)
T ss_pred CcccccCCCCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEE
No 299
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.29 E-value=1.6e+02 Score=24.46 Aligned_cols=72 Identities=10% Similarity=0.117 Sum_probs=41.2
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
-+.-.|.+|.........+.+.+ .....++++..-+.-... ......+.+.+.++++.+++..++.++++++
T Consensus 23 ~v~n~g~~G~~~~~~~~~l~~~~-~~~pd~vvl~~G~ND~~~----~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~ 94 (169)
T cd01828 23 KVANRGISGDTTRGLLARLDEDV-ALQPKAIFIMIGINDLAQ----GTSDEDIVANYRTILEKLRKHFPNIKIVVQS 94 (169)
T ss_pred ceEecCcccccHHHHHHHHHHHh-ccCCCEEEEEeeccCCCC----CCCHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 36777887765554444443333 334577777543221111 1112344578888888888877777777765
No 300
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=36.08 E-value=72 Score=29.49 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=31.0
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
++.++ |=+|...+.....++..|+++|++|+++|.=-.|+.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 35555 765655666667899999999999999998766553
No 301
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=36.08 E-value=52 Score=32.00 Aligned_cols=39 Identities=21% Similarity=0.392 Sum_probs=31.5
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEE
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~ 189 (433)
...+|.||++-|+.|+....-...++.++.++||.|..+
T Consensus 97 ~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~Lv 135 (483)
T KOG0780|consen 97 KKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALV 135 (483)
T ss_pred ccCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEE
Confidence 457899999999998776665677888999999987654
No 302
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=36.04 E-value=95 Score=26.17 Aligned_cols=44 Identities=18% Similarity=0.318 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCCceEEE
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA 258 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v 258 (433)
+++.+.++.++.+ +.+|+++|-|..|...+++++..++ .|..++
T Consensus 55 ~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~--~I~~vv 98 (160)
T PF08484_consen 55 AELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDND--LIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TT--TS--EE
T ss_pred HHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcc--eeEEEE
Confidence 3455555555544 4679999999999999999988766 465555
No 303
>PTZ00445 p36-lilke protein; Provisional
Probab=35.34 E-value=2.4e+02 Score=25.10 Aligned_cols=66 Identities=17% Similarity=0.073 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhCCceEEEEeCCC------CCCCCCC--CCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhH
Q 013936 171 YIKHLAFKMAGHGWNVVVSNHRG------LGGISLT--SDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGA 238 (433)
Q Consensus 171 y~~~~~~~l~~~G~~vv~~d~rG------~G~s~~~--~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG 238 (433)
-.+.+++.|.+.|.++++.|+=- .|+-..+ ........-+.++...+..+++. +-++.+|-+|==.
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~--~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS--NIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC--CCeEEEEEccchh
Confidence 35789999999999999999843 1111111 11112223457788888877664 4579999988643
No 304
>PRK13768 GTPase; Provisional
Probab=35.23 E-value=72 Score=29.15 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=29.4
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
++++-|.+|...+.+...++..+..+|.+|+++|.
T Consensus 4 ~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 4 IVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 56677887877888888899999999999999885
No 305
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=35.22 E-value=1.1e+02 Score=24.04 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=26.4
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
|++||-.|+..+...+.+++.+ |+.++-+|..-..
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccc
Confidence 6899999987777766666654 6888888876554
No 306
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=34.76 E-value=61 Score=27.45 Aligned_cols=33 Identities=21% Similarity=0.090 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
+++.+.++. ...-.++|.|+|+.++..|+...+
T Consensus 16 vl~aL~e~g-i~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERG-PLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCCC
Confidence 444454432 235689999999999998887653
No 307
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=34.52 E-value=2.1e+02 Score=30.00 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhCCceEEEE-eCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEec-hhHHHHHHHHhh
Q 013936 170 AYIKHLAFKMAGHGWNVVVS-NHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS-IGANILVKYLGE 247 (433)
Q Consensus 170 ~y~~~~~~~l~~~G~~vv~~-d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S-~GG~ia~~~a~~ 247 (433)
.|+..+++.+.+.|-+++++ |+-|.-. | +-..-+|..+++++|+-||++--|. -|+.+|.+.+..
T Consensus 718 ~YY~nlad~lV~agtHiL~IKDMAG~lK-----P--------~aa~lLi~alRdk~PdlPiHvHtHDtsGagVAsMlaca 784 (1176)
T KOG0369|consen 718 DYYLNLADKLVKAGTHILGIKDMAGVLK-----P--------EAAKLLIGALRDKFPDLPIHVHTHDTSGAGVASMLACA 784 (1176)
T ss_pred HHHHHHHHHHHhccCeEEeehhhhcccC-----H--------HHHHHHHHHHHhhCCCCceEEeccCCccHHHHHHHHHH
Confidence 46678999999999888887 6665422 1 4466778899999999999999885 466676665544
No 308
>PF13721 SecD-TM1: SecD export protein N-terminal TM region
Probab=34.48 E-value=74 Score=24.50 Aligned_cols=36 Identities=25% Similarity=0.461 Sum_probs=27.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhhhhcccccccCccCCCeEEEEcC
Q 013936 23 LIPLSHYFLFIFLIFIIFLYNFLEIHFLRDLVTGFRGDPVYLTYSA 68 (433)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 68 (433)
.-|.|.|++.++.+++.++|-+-++ .++.|.+.-.+
T Consensus 3 ~yp~WKyllil~vl~~~~lyALPnl----------yge~pAvqIs~ 38 (101)
T PF13721_consen 3 RYPLWKYLLILVVLLLGALYALPNL----------YGEDPAVQISA 38 (101)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhc----------cCCCCcEEEec
Confidence 3478999999888888889888876 45556665543
No 309
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=34.41 E-value=2.9e+02 Score=23.44 Aligned_cols=39 Identities=21% Similarity=0.390 Sum_probs=31.5
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
..+.++.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 557799999999988888778888888778888877754
No 310
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=34.22 E-value=2.9e+02 Score=26.39 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=62.3
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCc--EEEEEec
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP--LYAVGTS 235 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~--i~lvG~S 235 (433)
|+-|.-++++ +.-+..-+++...+||.++.+|=-|.=... ....+.+..+.+-++...+..| +.++.-+
T Consensus 197 vI~~~~G~Dp-AaVafDAi~~Akar~~DvvliDTAGRLhnk--------~nLM~EL~KI~rV~~k~~~~ap~e~llvlDA 267 (340)
T COG0552 197 VISGKEGADP-AAVAFDAIQAAKARGIDVVLIDTAGRLHNK--------KNLMDELKKIVRVIKKDDPDAPHEILLVLDA 267 (340)
T ss_pred EEccCCCCCc-HHHHHHHHHHHHHcCCCEEEEeCcccccCc--------hhHHHHHHHHHHHhccccCCCCceEEEEEEc
Confidence 3443433443 334456777888899999999987743322 2345677777776666555433 7777788
Q ss_pred hhHHHHHHHHhhcCCCCCceEEEEE
Q 013936 236 IGANILVKYLGENGVNTPLVGAAAI 260 (433)
Q Consensus 236 ~GG~ia~~~a~~~~~~~~v~~~v~i 260 (433)
.-|.=++.=|..+.+...+.|+|+-
T Consensus 268 ttGqnal~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 268 TTGQNALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred ccChhHHHHHHHHHHhcCCceEEEE
Confidence 8888888777777665578888864
No 311
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=34.08 E-value=2.4e+02 Score=26.97 Aligned_cols=99 Identities=23% Similarity=0.187 Sum_probs=53.8
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCC--ceEEEEe--CCCCCCCCC--------CCC-CcccCCChHHHHHHHHHHHHhC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHG--WNVVVSN--HRGLGGISL--------TSD-CFYNGGWTEDLRRVIDYLHCQY 224 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G--~~vv~~d--~rG~G~s~~--------~~~-~~~~~~~~~Dl~~~i~~l~~~~ 224 (433)
|+++|+ | |....+..+++.+.... ..|+++| .|+..--+. ... ........+-+..+++++....
T Consensus 57 lL~YG~-G-SKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGY-G-SKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEec-C-hHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 788888 4 45666678887776653 6777776 333221000 000 0111122234455556665554
Q ss_pred CCCcEEEEEechhHHH--------HHHHHhhcCCCCCceEEEEEc
Q 013936 225 PEVPLYAVGTSIGANI--------LVKYLGENGVNTPLVGAAAIC 261 (433)
Q Consensus 225 ~~~~i~lvG~S~GG~i--------a~~~a~~~~~~~~v~~~v~i~ 261 (433)
+..+++++=|++=|-. ++..++..|. |.-+..+.
T Consensus 135 ~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~---I~lIASiD 176 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPN---IHLIASID 176 (326)
T ss_pred CCCceEEEEECCCChhhcChHHHHHHHHHHcCCC---eEEEEecc
Confidence 4678999999886655 3333444554 65555554
No 312
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.
Probab=34.03 E-value=62 Score=26.72 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=27.4
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
||++-|.+|+..+.+.+.+...+...|+.++.+|
T Consensus 1 ~i~i~G~~GsGKSTla~~L~~~l~~~g~~~~~i~ 34 (149)
T cd02027 1 VIWLTGLSGSGKSTIARALEEKLFQRGRPVYVLD 34 (149)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 3666799888888888888888887888888876
No 313
>PRK05541 adenylylsulfate kinase; Provisional
Probab=33.80 E-value=84 Score=26.60 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=30.1
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
..|.+|++-|..|+..+...+.+...+...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 34668999999998888887888888877777777775
No 314
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=33.58 E-value=86 Score=28.10 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=30.1
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
+|.+..+=+|...+.....++..++++|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4566665555556666678889999999999999986554
No 315
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=33.25 E-value=87 Score=26.28 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=25.1
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
.+..+=+|...+.....++..++++|++|+.+|.=
T Consensus 3 ~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 3 VVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34444444445566678899999999999999764
No 316
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=33.18 E-value=48 Score=31.51 Aligned_cols=59 Identities=24% Similarity=0.171 Sum_probs=36.8
Q ss_pred ccceEEEeeCCCCcCCCCCC-------C---------hh-------HHhcCC-CeEEEEcCCCCeeeeccCCcCCCCcHH
Q 013936 350 SVPLLCISTLDDPVCTREAI-------P---------WD-------ECRANE-KIILATTRHGGHLAFYEGITAKSLWWV 405 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~~-------~---------~~-------~~~~~~-~~~l~~~~~gGH~~~~e~~~~~~~w~~ 405 (433)
.+++|+.+|..|-+|+.-.. . +. ..+... +..++.+.++||+.. . .|. ...
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~--qP~--~al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y--RPN--ETF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c--CHH--HHH
Confidence 47999999999988876311 1 10 001113 388889999999873 2 133 345
Q ss_pred HHHHHHHH
Q 013936 406 RAVNVFLD 413 (433)
Q Consensus 406 ~~v~~Fl~ 413 (433)
+.+..|++
T Consensus 308 ~m~~~fi~ 315 (319)
T PLN02213 308 IMFQRWIS 315 (319)
T ss_pred HHHHHHHc
Confidence 66666664
No 317
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=33.06 E-value=61 Score=30.65 Aligned_cols=32 Identities=38% Similarity=0.211 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
+++.+.++ +-..=.++|.|+|+.++..|++..
T Consensus 33 vL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 34444443 233468999999999999998864
No 318
>PRK10867 signal recognition particle protein; Provisional
Probab=32.51 E-value=90 Score=31.14 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=30.8
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNH 191 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~ 191 (433)
..|.++++-|.+|+..+.....++.++.++ |.+|.+++.
T Consensus 98 ~~p~vI~~vG~~GsGKTTtaakLA~~l~~~~G~kV~lV~~ 137 (433)
T PRK10867 98 KPPTVIMMVGLQGAGKTTTAGKLAKYLKKKKKKKVLLVAA 137 (433)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 347788888999988887778888888888 887776654
No 319
>PRK09435 membrane ATPase/protein kinase; Provisional
Probab=32.51 E-value=1.1e+02 Score=29.44 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=33.3
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
..++.+|-+.|.+|+..+.++..++..+.++|++|.++..
T Consensus 53 ~~~~~~igi~G~~GaGKSTl~~~l~~~l~~~g~~v~vi~~ 92 (332)
T PRK09435 53 TGNALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAV 92 (332)
T ss_pred CCCcEEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 3567899999999998999999999999988887776654
No 320
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=32.31 E-value=1.5e+02 Score=26.05 Aligned_cols=90 Identities=20% Similarity=0.185 Sum_probs=50.2
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCC------CCCCcc-cCCChHHHHH------HHHH
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL------TSDCFY-NGGWTEDLRR------VIDY 219 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~------~~~~~~-~~~~~~Dl~~------~i~~ 219 (433)
..+-|++++--.+. ...+.+.+.+.+.+.|..+..+...-....+. ..+..+ ..+.+..+.. .++.
T Consensus 28 ~~~~i~~iptA~~~-~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~ 106 (210)
T cd03129 28 AGARVLFIPTASGD-RDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDA 106 (210)
T ss_pred CCCeEEEEeCCCCC-hHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHH
Confidence 35667888765443 45666778888888898888776543211110 001111 1233222211 2223
Q ss_pred HHHhCCCCcEEEEEechhHHHHHHH
Q 013936 220 LHCQYPEVPLYAVGTSIGANILVKY 244 (433)
Q Consensus 220 l~~~~~~~~i~lvG~S~GG~ia~~~ 244 (433)
+.+.+. .-.+++|.|.|+++....
T Consensus 107 i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 107 ILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 333332 347999999999998876
No 321
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=32.27 E-value=88 Score=31.25 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=32.9
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
..|.++++-|.+|...+.....++..+.++|++|.+++.-
T Consensus 93 ~~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D 132 (437)
T PRK00771 93 LKPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAAD 132 (437)
T ss_pred CCCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCC
Confidence 3577888889999888877788999999899999888764
No 322
>PRK10824 glutaredoxin-4; Provisional
Probab=32.25 E-value=2.5e+02 Score=22.14 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=48.5
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~l 231 (433)
...|+|||.-|....+...|.+.....|.+.|...-.+|.-. ..++.+.+..+....--..|++
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~----------------d~~~~~~l~~~sg~~TVPQIFI 76 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ----------------NPDIRAELPKYANWPTFPQLWV 76 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC----------------CHHHHHHHHHHhCCCCCCeEEE
Confidence 356899999986544444565666666767664433344310 0234444444332211234888
Q ss_pred EEechhHHHHHHHHhhcCC
Q 013936 232 VGTSIGANILVKYLGENGV 250 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~ 250 (433)
=|...||.--+.-+.+.++
T Consensus 77 ~G~~IGG~ddl~~l~~~G~ 95 (115)
T PRK10824 77 DGELVGGCDIVIEMYQRGE 95 (115)
T ss_pred CCEEEcChHHHHHHHHCCC
Confidence 8999999977766655554
No 323
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=31.95 E-value=3.4e+02 Score=25.09 Aligned_cols=76 Identities=8% Similarity=0.078 Sum_probs=49.1
Q ss_pred HHHHHHHHh-CCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCC
Q 013936 173 KHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN 251 (433)
Q Consensus 173 ~~~~~~l~~-~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~ 251 (433)
......+.+ .++.++.+|-.|..... .+.+.++.+.+....|...+.++.-++++.-+...+..+..
T Consensus 143 ~~~l~~l~~~~~~D~ViIDt~Gr~~~~-----------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~- 210 (270)
T PRK06731 143 TRALTYFKEEARVDYILIDTAGKNYRA-----------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKD- 210 (270)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCcCC-----------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCC-
Confidence 444555544 47999999999875321 24455555555444454445556667888888888877754
Q ss_pred CCceEEEEE
Q 013936 252 TPLVGAAAI 260 (433)
Q Consensus 252 ~~v~~~v~i 260 (433)
..+.++|+-
T Consensus 211 ~~~~~~I~T 219 (270)
T PRK06731 211 IHIDGIVFT 219 (270)
T ss_pred CCCCEEEEE
Confidence 468888763
No 324
>PRK05568 flavodoxin; Provisional
Probab=31.94 E-value=2.7e+02 Score=22.36 Aligned_cols=78 Identities=12% Similarity=0.043 Sum_probs=40.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCC-C------CcccCCC--hHHHHHHHHHHHHhCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTS-D------CFYNGGW--TEDLRRVIDYLHCQYPEV 227 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~-~------~~~~~~~--~~Dl~~~i~~l~~~~~~~ 227 (433)
+|+.+-..|+ .....+.+++.+.+.|..|.++|..-.-..+... + ..|..+. ...+..+++.+.....+.
T Consensus 5 ~IvY~S~~Gn-T~~~a~~i~~~~~~~g~~v~~~~~~~~~~~~~~~~d~iilgsp~y~~~~~~~~~~~~f~~~~~~~~~~k 83 (142)
T PRK05568 5 NIIYWSGTGN-TEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLEEGEMEPFVESISSLVKGK 83 (142)
T ss_pred EEEEECCCch-HHHHHHHHHHHHHHCCCeEEEEECCCCCHHHHHhCCEEEEECCccCcccccchhHHHHHHHhhhhhCCC
Confidence 3444444344 4555577777777789999888886432111110 0 0112221 134556666554444456
Q ss_pred cEEEEEec
Q 013936 228 PLYAVGTS 235 (433)
Q Consensus 228 ~i~lvG~S 235 (433)
++.++|.+
T Consensus 84 ~~~~f~t~ 91 (142)
T PRK05568 84 KLVLFGSY 91 (142)
T ss_pred EEEEEEcc
Confidence 67777763
No 325
>PRK13973 thymidylate kinase; Provisional
Probab=31.82 E-value=1.2e+02 Score=26.74 Aligned_cols=38 Identities=21% Similarity=0.394 Sum_probs=33.4
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
.+|.+=|..|+..+.-.+.+++.|.++|+.|+....||
T Consensus 4 ~~IviEG~dGsGKtTq~~~l~~~l~~~g~~~~~~~~p~ 41 (213)
T PRK13973 4 RFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPG 41 (213)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 46777899888888888899999999999999999887
No 326
>PRK10279 hypothetical protein; Provisional
Probab=31.80 E-value=62 Score=30.50 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=22.6
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
+++.+.+. +-.+-.++|.|+|+.++..|++..
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 34444443 234568999999999999998754
No 327
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=31.24 E-value=3.2e+02 Score=25.32 Aligned_cols=62 Identities=16% Similarity=0.024 Sum_probs=40.3
Q ss_pred HhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHH
Q 013936 180 AGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILV 242 (433)
Q Consensus 180 ~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~ 242 (433)
.++|-+|+++-+|---.+-.. -..+..-..+|...+++.++...++.++.++=|+-||.+..
T Consensus 45 ~kr~srvI~~Ihrqe~~~~~g-iPi~~~I~i~dse~v~raI~~~~~~~~IdLii~TpGG~v~A 106 (285)
T PF01972_consen 45 EKRGSRVITLIHRQERVSFLG-IPIYRYIDIDDSEFVLRAIREAPKDKPIDLIIHTPGGLVDA 106 (285)
T ss_pred HHhCCEEEEEEEeccccceec-cccceeEcHhhHHHHHHHHHhcCCCCceEEEEECCCCcHHH
Confidence 357999999988731111100 01112223478888888888776677888888999998865
No 328
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=31.04 E-value=81 Score=28.03 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=30.3
Q ss_pred EEECCCCCCChhHHHHHHHHHHH-hCCceEEEEeCCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMA-GHGWNVVVSNHRG 193 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~-~~G~~vv~~d~rG 193 (433)
+.+=|.+|+..+..+..+++.+. +.|..++++|.-|
T Consensus 26 ~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 26 IAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 33448888888888999999999 8899999999965
No 329
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=30.93 E-value=74 Score=27.40 Aligned_cols=33 Identities=18% Similarity=-0.025 Sum_probs=23.2
Q ss_pred HHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc
Q 013936 215 RVIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 215 ~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
.+++.+.++. ..+=.++|.|.||.++..++...
T Consensus 16 Gvl~~L~e~~-~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAG-ILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcC-CCcceEEEECHHHHHHHHHHcCC
Confidence 4455554432 33468999999999999888643
No 330
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.76 E-value=1.8e+02 Score=24.63 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=39.9
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
.-+.-.|..|.....+...+ +.+......++++..=+---... .....+.+++.++++.++++.|+.++++++
T Consensus 41 ~~~~n~g~~G~t~~~~~~~l-~~~~~~~pd~Vii~~G~ND~~~~----~~~~~~~~~l~~li~~i~~~~~~~~iiv~~ 113 (191)
T cd01836 41 VRWRLFAKTGATSADLLRQL-APLPETRFDVAVISIGVNDVTHL----TSIARWRKQLAELVDALRAKFPGARVVVTA 113 (191)
T ss_pred eEEEEEecCCcCHHHHHHHH-HhcccCCCCEEEEEecccCcCCC----CCHHHHHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 34555677666544443322 22334456777774322111110 111234578888888888877777777764
No 331
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.58 E-value=1.6e+02 Score=24.04 Aligned_cols=69 Identities=17% Similarity=0.150 Sum_probs=39.2
Q ss_pred CCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 161 PGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 161 HG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
.|+.|.......+.+-..+.....+++++.. |.-.... . .....+.+.+.++++.+++..|+.++++++
T Consensus 18 ~g~~G~~~~~~~~~~~~~~~~~~pd~vvi~~-G~ND~~~--~-~~~~~~~~~~~~~i~~i~~~~p~~~ii~~~ 86 (157)
T cd01833 18 EGHSGYLIDQIAAAAADWVLAAKPDVVLLHL-GTNDLVL--N-RDPDTAPDRLRALIDQMRAANPDVKIIVAT 86 (157)
T ss_pred CCCCCccHHHHHHHhhhccccCCCCEEEEec-cCccccc--C-CCHHHHHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 5676665554434443455555677777754 3222111 0 111234478888999888887777666654
No 332
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=30.37 E-value=1.1e+02 Score=24.16 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=25.2
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
+++-|-+|...+.....++..+.++|.+|+++|.
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 3445665665666667788888889999999985
No 333
>PRK07667 uridine kinase; Provisional
Probab=30.26 E-value=1.4e+02 Score=25.78 Aligned_cols=42 Identities=17% Similarity=0.299 Sum_probs=34.0
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~ 194 (433)
..+.||.+-|..|+..+...+.+...+.+.|..+.+++.-.+
T Consensus 15 ~~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 15 ENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 345789999999988888878888888888888888877764
No 334
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=30.26 E-value=64 Score=28.82 Aligned_cols=35 Identities=9% Similarity=0.279 Sum_probs=26.2
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
..||++|..... ....+..+++.+.++||+++.++
T Consensus 187 g~IiLlHd~~~~-t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKD-NAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCC-HHHHHHHHHHHHHHCCCEEEEhH
Confidence 358999975332 33456889999999999998774
No 335
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=30.14 E-value=1e+02 Score=26.57 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=19.3
Q ss_pred ChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 209 WTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 209 ~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
+.+-+..+++.+++..|..||+++-+
T Consensus 76 ~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 76 FRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 44678888999999999999998863
No 336
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=30.11 E-value=1e+02 Score=25.90 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=25.8
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
|.+..+=+|...+.....++..+++.|++|+++|.=-
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~ 38 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADI 38 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 3444444454455556778899999999999998643
No 337
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=29.83 E-value=2.3e+02 Score=20.90 Aligned_cols=80 Identities=20% Similarity=0.326 Sum_probs=48.0
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCc-EEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP-LYA 231 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~-i~l 231 (433)
..|+|||.-|.++.+...|-....+.|.+.|.....+|.... .++.+.+..+.... ..| +++
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~----------------~~~~~~l~~~~g~~-tvP~vfi 69 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED----------------EEVRQGLKEYSNWP-TFPQLYV 69 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC----------------HHHHHHHHHHhCCC-CCCEEEE
Confidence 468999999876666667767777788888876666664310 23333333332221 223 555
Q ss_pred EEechhHHHHHHHHhhcC
Q 013936 232 VGTSIGANILVKYLGENG 249 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~ 249 (433)
=|.-+||.--+.-+-+.+
T Consensus 70 ~g~~iGG~~~l~~l~~~g 87 (90)
T cd03028 70 NGELVGGCDIVKEMHESG 87 (90)
T ss_pred CCEEEeCHHHHHHHHHcC
Confidence 566678877665554443
No 338
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=29.72 E-value=2.2e+02 Score=24.18 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEechhHHH
Q 013936 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANI 240 (433)
Q Consensus 211 ~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~i 240 (433)
+|..++++.|.+..| .++++|..+.-.=
T Consensus 88 ~~~~~i~~~I~~~~p--div~vglG~PkQE 115 (172)
T PF03808_consen 88 EEEEAIINRINASGP--DIVFVGLGAPKQE 115 (172)
T ss_pred hhHHHHHHHHHHcCC--CEEEEECCCCHHH
Confidence 455566666665543 3666665554443
No 339
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=29.70 E-value=1.1e+02 Score=27.43 Aligned_cols=40 Identities=13% Similarity=0.262 Sum_probs=32.0
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
++.+=|..|+........++..|.++|++|.++.+-+|+.
T Consensus 3 vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~~ 42 (229)
T PRK14494 3 AIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHEF 42 (229)
T ss_pred EEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccCC
Confidence 5666677776667777889999999999999998876643
No 340
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=29.69 E-value=1.2e+02 Score=30.24 Aligned_cols=39 Identities=23% Similarity=0.409 Sum_probs=30.7
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHH-hCCceEEEEeC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMA-GHGWNVVVSNH 191 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~-~~G~~vv~~d~ 191 (433)
.+|.++++-|.+|+..+.....++..+. +.|.+|.++|.
T Consensus 97 ~~p~vi~~vG~~GsGKTTtaakLA~~l~~~~g~kV~lV~~ 136 (428)
T TIGR00959 97 KPPTVILMVGLQGSGKTTTCGKLAYYLKKKQGKKVLLVAC 136 (428)
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 4578899999999888877778888876 57888876655
No 341
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=29.69 E-value=1.3e+02 Score=25.33 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=33.1
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
++.+=|..|+..+..+..++..+..+|++|-++.+-+++.
T Consensus 3 vi~i~G~~gsGKTTli~~L~~~l~~~g~~V~~iK~~~~~~ 42 (159)
T cd03116 3 VIGFVGYSGSGKTTLLEKLIPALSARGLRVAVIKHDHHDF 42 (159)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEEEecCCcc
Confidence 5666688787788888999999999999999998877754
No 342
>PRK13700 conjugal transfer protein TraD; Provisional
Probab=29.65 E-value=90 Score=33.19 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=33.1
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
++++|-+|+..+..++.+++...++|-+++++|.-|
T Consensus 188 ~li~GttGSGKS~~i~~LL~~ir~RGdrAIIyD~~G 223 (732)
T PRK13700 188 FCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSG 223 (732)
T ss_pred eEEeCCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 788899998888888999999999999999999988
No 343
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=29.58 E-value=1.1e+02 Score=29.80 Aligned_cols=43 Identities=12% Similarity=0.266 Sum_probs=36.9
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
++.+|-+-|..|+..+..+..++..|.++||+|.++-+-+|+.
T Consensus 204 ~~~~~~~~g~~~~GKtt~~~~l~~~l~~~g~~v~~iKh~~h~~ 246 (366)
T PRK14489 204 APPLLGVVGYSGTGKTTLLEKLIPELIARGYRIGLIKHSHHRV 246 (366)
T ss_pred CccEEEEecCCCCCHHHHHHHHHHHHHHcCCEEEEEEECCccc
Confidence 3457888898888888889999999999999999999887764
No 344
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=29.56 E-value=65 Score=32.05 Aligned_cols=42 Identities=10% Similarity=0.038 Sum_probs=27.2
Q ss_pred cceEEEeeCCCCcCCCCCCChhHHhcCCCeEEEEcCCCCeeeeccC
Q 013936 351 VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEG 396 (433)
Q Consensus 351 ~P~Lii~g~dD~ivp~~~~~~~~~~~~~~~~l~~~~~gGH~~~~e~ 396 (433)
.-+++.+|+.||...... ....+..+..+++++|+|+.-+..
T Consensus 377 tnviFtNG~~DPW~~lgv----~~~~~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGV----TSDSSDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCcccccC----CCCCCCCcccEEECCCeeeccccC
Confidence 579999999999876552 123456777788999999987664
No 345
>PRK13529 malate dehydrogenase; Provisional
Probab=29.51 E-value=53 Score=33.67 Aligned_cols=36 Identities=14% Similarity=0.318 Sum_probs=23.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCc-------eEEEEeCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGW-------NVVVSNHRG 193 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~-------~vv~~d~rG 193 (433)
-+++.|. |+..-...+.++..+.+.|. +++.+|..|
T Consensus 297 riv~~GA-GsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~G 339 (563)
T PRK13529 297 RIVFLGA-GSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQG 339 (563)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCC
Confidence 4556675 33333344556666666787 899999999
No 346
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=29.27 E-value=1.7e+02 Score=25.63 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=28.4
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHh-CCceEEEEeCCC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRG 193 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~-~G~~vv~~d~rG 193 (433)
...+|.++-+-+|...+.....++..+++ .|++|+++|.==
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D~ 75 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDADL 75 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 34566676555455555556678888886 699999997653
No 347
>PLN02209 serine carboxypeptidase
Probab=28.88 E-value=64 Score=32.23 Aligned_cols=59 Identities=19% Similarity=0.059 Sum_probs=38.1
Q ss_pred ccceEEEeeCCCCcCCCCCCChhH-----------------------HhcCCC-eEEEEcCCCCeeeeccCCcCCCCcHH
Q 013936 350 SVPLLCISTLDDPVCTREAIPWDE-----------------------CRANEK-IILATTRHGGHLAFYEGITAKSLWWV 405 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~~~~~~-----------------------~~~~~~-~~l~~~~~gGH~~~~e~~~~~~~w~~ 405 (433)
.+++|+.+|..|-+|+.-...... .+...+ ..++.+.++||+.. . .|+ ...
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~--qP~--~al 425 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-Y--LPE--ESS 425 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-c--CHH--HHH
Confidence 479999999999999863211100 012244 88899999999873 2 133 355
Q ss_pred HHHHHHHH
Q 013936 406 RAVNVFLD 413 (433)
Q Consensus 406 ~~v~~Fl~ 413 (433)
..+.+|+.
T Consensus 426 ~m~~~fi~ 433 (437)
T PLN02209 426 IMFQRWIS 433 (437)
T ss_pred HHHHHHHc
Confidence 66667764
No 348
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=28.63 E-value=50 Score=33.27 Aligned_cols=60 Identities=17% Similarity=0.313 Sum_probs=39.3
Q ss_pred ccceEEEeeCCCCcCCCCC-------CChh--------------H--------HhcCC-----CeEEEEcCCCCeeeecc
Q 013936 350 SVPLLCISTLDDPVCTREA-------IPWD--------------E--------CRANE-----KIILATTRHGGHLAFYE 395 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~-------~~~~--------------~--------~~~~~-----~~~l~~~~~gGH~~~~e 395 (433)
.+++|+.+|..|-+|+.-. +.+. . .+... +..++.+.++||+...+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999999888631 1110 0 01113 67888889999988776
Q ss_pred CCcCCCCcHHHHHHHHHH
Q 013936 396 GITAKSLWWVRAVNVFLD 413 (433)
Q Consensus 396 ~~~~~~~w~~~~v~~Fl~ 413 (433)
. |+ ...+.+.+|+.
T Consensus 444 ~--P~--~~~~~i~~fl~ 457 (462)
T PTZ00472 444 Q--PA--VALTMINRFLR 457 (462)
T ss_pred H--HH--HHHHHHHHHHc
Confidence 3 33 35567777764
No 349
>PF10412 TrwB_AAD_bind: Type IV secretion-system coupling protein DNA-binding domain; InterPro: IPR019476 The plasmid conjugative coupling protein TraD (also known as TrwB) is a basic integral inner-membrane nucleoside-triphosphate-binding protein. It is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells []. This protein forms hexamers from six structurally very similar protomers []. This hexamer contains a central channel running from the cytosolic pole (formed by the all-alpha domains) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB all-alpha domain appears to be the DNA-binding domain of the structure. ; PDB: 1E9S_D 1E9R_F 1GKI_B 1GL7_G 1GL6_A.
Probab=28.60 E-value=77 Score=31.09 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=28.9
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
+++.|-+|+..+..+..++..+.++|.++|++|.=|
T Consensus 18 ~li~G~~GsGKT~~i~~ll~~~~~~g~~~iI~D~kg 53 (386)
T PF10412_consen 18 ILIIGATGSGKTQAIRHLLDQIRARGDRAIIYDPKG 53 (386)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHTT-EEEEEEETT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 566677788788888999999989999999999876
No 350
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=28.55 E-value=1.2e+02 Score=25.56 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=28.8
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
++++-|-+|...+.....++..+.+.|.+|+++|.-
T Consensus 2 ~~~~~G~~G~GKTt~~~~la~~~~~~g~~v~~i~~D 37 (173)
T cd03115 2 VILLVGLQGVGKTTTAAKLALYLKKKGKKVLLVAAD 37 (173)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 456668888878888888888898899999888743
No 351
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Members of this protein are L-seryl-tRNA(Sec) kinase. This enzyme is part of a two-step pathway in Eukaryota and Archaea for performing selenocysteine biosynthesis by changing serine misacylated on selenocysteine-tRNA to selenocysteine. This enzyme performs the first step, phosphorylation of the OH group of the serine side chain. This family represents archaeal proteins with this activity.
Probab=28.49 E-value=79 Score=28.67 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=27.8
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
+|++-|.+|+..+...+.+++.+...|+.++.++
T Consensus 1 LIvl~G~pGSGKST~a~~La~~l~~~~~~v~~i~ 34 (249)
T TIGR03574 1 LIILTGLPGVGKSTFSKELAKKLSEKNIDVIILG 34 (249)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCceEEEc
Confidence 4677799998888888888888887888888774
No 352
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=28.32 E-value=82 Score=31.58 Aligned_cols=60 Identities=25% Similarity=0.306 Sum_probs=38.6
Q ss_pred cceEEEeeCCCCcCCCCCC----------------ChhHH--h------cCCCeEEEEcCCCCeeeeccCCcCCCCcHHH
Q 013936 351 VPLLCISTLDDPVCTREAI----------------PWDEC--R------ANEKIILATTRHGGHLAFYEGITAKSLWWVR 406 (433)
Q Consensus 351 ~P~Lii~g~dD~ivp~~~~----------------~~~~~--~------~~~~~~l~~~~~gGH~~~~e~~~~~~~w~~~ 406 (433)
.++++.+|+.|-+||.-.- +|... + ...+..++.+.++||+.-.. ++.....
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~----~p~~al~ 439 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD----KPESALI 439 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC----CcHHHHH
Confidence 8999999999999986422 22110 0 22446678999999976554 2223456
Q ss_pred HHHHHHHH
Q 013936 407 AVNVFLDA 414 (433)
Q Consensus 407 ~v~~Fl~~ 414 (433)
.+..|++.
T Consensus 440 m~~~fl~g 447 (454)
T KOG1282|consen 440 MFQRFLNG 447 (454)
T ss_pred HHHHHHcC
Confidence 67777653
No 353
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=28.32 E-value=93 Score=28.80 Aligned_cols=39 Identities=23% Similarity=0.395 Sum_probs=28.0
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
+|++-|++|+..+...+.+.+.+.+.|+.|+.++--..+
T Consensus 3 Liil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 3 LIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 677779999888888888899999999999999865554
No 354
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=28.25 E-value=1.9e+02 Score=27.74 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=26.3
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~ 198 (433)
|+.....+..+++.+.++|+++.++ -||+|+..
T Consensus 68 GTGKTP~v~~La~~l~~~G~~~~Il-SRGYg~~~ 100 (338)
T PRK01906 68 GTGKTPTVIALVDALRAAGFTPGVV-SRGYGAKI 100 (338)
T ss_pred CCChHHHHHHHHHHHHHcCCceEEE-ecCCCCCC
Confidence 4556778888999999999987665 78999854
No 355
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=28.15 E-value=2.2e+02 Score=26.43 Aligned_cols=64 Identities=27% Similarity=0.299 Sum_probs=41.2
Q ss_pred EECCCCCCChhHHHHHHHHHHHhCCceEEEE------eCCCCCCCCCCCCCcccCCChHHHHHHHHHHHH--hCCCCcEE
Q 013936 159 VIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS------NHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHC--QYPEVPLY 230 (433)
Q Consensus 159 llHG~~g~s~~~y~~~~~~~l~~~G~~vv~~------d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~--~~~~~~i~ 230 (433)
.+||..|++.. +..++..|++|.++ |++|+|...+.. .-.+++.++++.+.. ....-..+
T Consensus 10 Vv~G~vGn~AA------~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v------~~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 10 VVYGSVGNSAA------IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV------MPPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred EeecccccHhH------HHHHHHcCCceeeeceEEecCCCCCCCCCCcC------CCHHHHHHHHHHHHhcccccccCEE
Confidence 56787776433 34567789887665 678888743321 123778888887776 34444678
Q ss_pred EEEe
Q 013936 231 AVGT 234 (433)
Q Consensus 231 lvG~ 234 (433)
+.|+
T Consensus 78 ltGY 81 (281)
T COG2240 78 LTGY 81 (281)
T ss_pred EEcc
Confidence 8887
No 356
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=28.13 E-value=33 Score=28.88 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=20.8
Q ss_pred ChHHHHHHH----HHHHHhCC----CCcEEEEEechhHH
Q 013936 209 WTEDLRRVI----DYLHCQYP----EVPLYAVGTSIGAN 239 (433)
Q Consensus 209 ~~~Dl~~~i----~~l~~~~~----~~~i~lvG~S~GG~ 239 (433)
..+.++..+ +.++++++ ..+|.++|.||+..
T Consensus 78 ~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 78 SADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 347777777 67776652 34799999999877
No 357
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=28.09 E-value=1.7e+02 Score=28.72 Aligned_cols=43 Identities=19% Similarity=0.179 Sum_probs=28.8
Q ss_pred cEEEEECCCC-CCChhHHHHHHHHHHHhCCceEEEEeC-CCCCCC
Q 013936 155 PIVVVIPGLT-SDSAAAYIKHLAFKMAGHGWNVVVSNH-RGLGGI 197 (433)
Q Consensus 155 p~vvllHG~~-g~s~~~y~~~~~~~l~~~G~~vv~~d~-rG~G~s 197 (433)
+.||-+-..- |...+....+++..|+.+|++|+++|. -..|..
T Consensus 106 ~~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~nl 150 (387)
T PHA02519 106 PVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGTA 150 (387)
T ss_pred ceEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCc
Confidence 4454444333 333444456788899999999999996 777654
No 358
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=28.07 E-value=67 Score=32.05 Aligned_cols=59 Identities=24% Similarity=0.125 Sum_probs=37.9
Q ss_pred ccceEEEeeCCCCcCCCCCCChhH-----------------------HhcCC-CeEEEEcCCCCeeeeccCCcCCCCcHH
Q 013936 350 SVPLLCISTLDDPVCTREAIPWDE-----------------------CRANE-KIILATTRHGGHLAFYEGITAKSLWWV 405 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~~~~~~-----------------------~~~~~-~~~l~~~~~gGH~~~~e~~~~~~~w~~ 405 (433)
.+++|+.+|..|-+||.-...... .+... +..++.+.++||+...+ |+ ...
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~q---P~--~al 421 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYR---PN--ETF 421 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCC---HH--HHH
Confidence 479999999999998863211100 01213 38889999999988321 33 355
Q ss_pred HHHHHHHH
Q 013936 406 RAVNVFLD 413 (433)
Q Consensus 406 ~~v~~Fl~ 413 (433)
+.+..|++
T Consensus 422 ~m~~~Fi~ 429 (433)
T PLN03016 422 IMFQRWIS 429 (433)
T ss_pred HHHHHHHc
Confidence 66777764
No 359
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=27.99 E-value=1.5e+02 Score=22.73 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=21.4
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~ 189 (433)
+++|+|++|.+-. +..+ ...+..|.+.||+|..+
T Consensus 63 ~~~~vvvyc~~g~-~~~s---~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGPG-CNGA---TKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCCC-CchH---HHHHHHHHHcCCeEEEe
Confidence 4678889987631 1112 34567778889986544
No 360
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=27.87 E-value=82 Score=29.14 Aligned_cols=21 Identities=33% Similarity=0.148 Sum_probs=18.3
Q ss_pred cEEEEEechhHHHHHHHHhhc
Q 013936 228 PLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 228 ~i~lvG~S~GG~ia~~~a~~~ 248 (433)
.=.++|.|+|+.++..|+...
T Consensus 39 ~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred ccEEEEECHHHHHHHHHHcCC
Confidence 458999999999999999764
No 361
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=27.60 E-value=1.8e+02 Score=25.31 Aligned_cols=39 Identities=8% Similarity=0.204 Sum_probs=26.8
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
..+|.+.-+-+|...+.....++..++++|++|+++|.=
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 344455444444444555677888999999999999874
No 362
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
Probab=27.56 E-value=98 Score=30.27 Aligned_cols=54 Identities=22% Similarity=0.342 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHh
Q 013936 173 KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 173 ~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~ 246 (433)
+.-...+.+.|.+|+++|-. .|+| .-..+++.|++++||.-.+ +||+++..+-+
T Consensus 253 K~rl~ll~~aGvdvviLDSS-qGnS-------------~~qiemik~iK~~yP~l~V------iaGNVVT~~qa 306 (503)
T KOG2550|consen 253 KERLDLLVQAGVDVVILDSS-QGNS-------------IYQLEMIKYIKETYPDLQI------IAGNVVTKEQA 306 (503)
T ss_pred hHHHHHhhhcCCcEEEEecC-CCcc-------------hhHHHHHHHHHhhCCCcee------eccceeeHHHH
Confidence 44567788899999999963 3332 3367899999999997554 46777776544
No 363
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=27.54 E-value=1.3e+02 Score=21.43 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=19.2
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHH-HHHhCCceEEEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAF-KMAGHGWNVVVS 189 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~-~l~~~G~~vv~~ 189 (433)
..|.++++||-. ... ...++. ...++|+.++.+
T Consensus 30 ~~~~~~lvhGga--~~G--aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGA--PKG--ADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCC--CCC--HHHHHHHHHHHCCCeeEEe
Confidence 347789999953 111 123333 445578877765
No 364
>PRK14974 cell division protein FtsY; Provisional
Probab=27.38 E-value=1.3e+02 Score=28.84 Aligned_cols=38 Identities=26% Similarity=0.580 Sum_probs=31.7
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.+|.++++-|.+|...+.-+..++..+.++|++|++++
T Consensus 138 ~~~~vi~~~G~~GvGKTTtiakLA~~l~~~g~~V~li~ 175 (336)
T PRK14974 138 GKPVVIVFVGVNGTGKTTTIAKLAYYLKKNGFSVVIAA 175 (336)
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 45778889999988888778889999988999988865
No 365
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=27.34 E-value=67 Score=33.13 Aligned_cols=47 Identities=9% Similarity=0.135 Sum_probs=34.4
Q ss_pred CC-ccceEEEeeCCCCcCCCCCCCh-hH-----H-hcCCCeEEEEcCCCCeeeec
Q 013936 348 NV-SVPLLCISTLDDPVCTREAIPW-DE-----C-RANEKIILATTRHGGHLAFY 394 (433)
Q Consensus 348 ~i-~~P~Lii~g~dD~ivp~~~~~~-~~-----~-~~~~~~~l~~~~~gGH~~~~ 394 (433)
++ ..|++++||..|-++|...... .. . -.....+++.+++|-|+.-+
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 45 6899999999999999864332 11 1 12356889999999998754
No 366
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=27.13 E-value=97 Score=24.05 Aligned_cols=31 Identities=23% Similarity=0.456 Sum_probs=22.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhC-CceEEEEeC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNH 191 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~-G~~vv~~d~ 191 (433)
||++-|.+|+..+.+ ++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGKST~----a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKSTL----AKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHHH----HHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHHH----HHHHHHHHCCeEEEecc
Confidence 578889988766544 4555554 899999988
No 367
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=26.94 E-value=2e+02 Score=26.07 Aligned_cols=66 Identities=17% Similarity=0.249 Sum_probs=41.3
Q ss_pred hhhhhcCCCCCCcceEEEEcCCCCEEEEEeccccccccCCccccccccCCCCCcEEEEECCCCCCChhHHHHHHHHHHHh
Q 013936 102 FLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAG 181 (433)
Q Consensus 102 ~~~~~~~~~~~~~~r~~~~~~DG~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~ 181 (433)
+..++.+....+.+|..+.++.|.++.+. . -+|=|+--+..+.+. ..-++++.+
T Consensus 18 ~~eFi~~q~s~~~rrIVlVTSGGTtVPLE----------------------~-ntVRFiDNFSaGtRG---AaSAE~Fl~ 71 (302)
T KOG2728|consen 18 IEEFIKLQASLQGRRIVLVTSGGTTVPLE----------------------Q-NTVRFIDNFSAGTRG---AASAEYFLA 71 (302)
T ss_pred HHHHHHHHhhccCceEEEEecCCeEeecc----------------------c-CceEeeeccCcCCcc---chhHHHHHh
Confidence 34444443344557788888988888664 1 135666665444333 234677888
Q ss_pred CCceEEEEeCCC
Q 013936 182 HGWNVVVSNHRG 193 (433)
Q Consensus 182 ~G~~vv~~d~rG 193 (433)
+||.|+-+-..+
T Consensus 72 agYaVIFl~R~~ 83 (302)
T KOG2728|consen 72 AGYAVIFLYRER 83 (302)
T ss_pred CCceEEEEeecc
Confidence 999999886654
No 368
>TIGR02759 TraD_Ftype type IV conjugative transfer system coupling protein TraD. The TraD protein performs an essential coupling function in conjugative type IV secretion systems. This protein sits at the inner membrane in contact with the assembled pilus and its scaffold as well as the relaxosome-plasmid DNA complex (through TraM).
Probab=26.84 E-value=1.1e+02 Score=31.80 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=30.9
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
++++|-+|+..+..+..+.....++|.+++++|.-|
T Consensus 179 ~li~G~tGsGKs~~i~~ll~~~~~~g~~~ii~D~~g 214 (566)
T TIGR02759 179 ILIHGTTGSGKSVAIRKLLRWIRQRGDRAIIYDKGC 214 (566)
T ss_pred eEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 677788888788888888888888999999999876
No 369
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=26.49 E-value=4.9e+02 Score=23.65 Aligned_cols=40 Identities=30% Similarity=0.447 Sum_probs=28.6
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
++++.+++.++....++..+++.|.+.|+.|.++......
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~ 41 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEG 41 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCC
Confidence 4666676633334566788999998999999998765533
No 370
>TIGR00041 DTMP_kinase thymidylate kinase. Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.
Probab=26.36 E-value=1.7e+02 Score=25.02 Aligned_cols=38 Identities=18% Similarity=0.413 Sum_probs=31.8
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
.+|.+=|..|+..+...+.+++.+...|+.|+....|+
T Consensus 4 ~~IvieG~~GsGKsT~~~~L~~~l~~~g~~v~~~~~~~ 41 (195)
T TIGR00041 4 MFIVIEGIDGAGKTTQANLLKKLLQENGYDVLFTREPG 41 (195)
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 47888899888888888889999988999998877665
No 371
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=26.15 E-value=1.4e+02 Score=29.39 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=28.6
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
.+|.+.-.=+|...+....+++..|+.+|++|+++|.=-.|.
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~~ 163 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQAS 163 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCCC
Confidence 444555433344445555678889999999999999865554
No 372
>PRK05506 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional
Probab=26.14 E-value=1.1e+02 Score=32.23 Aligned_cols=39 Identities=13% Similarity=0.268 Sum_probs=31.9
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
..+|.+|++.|++|+..+...+.++..|..+|..++.+|
T Consensus 457 ~~~~~~i~~~G~~gsGKst~a~~l~~~l~~~~~~~~~l~ 495 (632)
T PRK05506 457 GQKPATVWFTGLSGSGKSTIANLVERRLHALGRHTYLLD 495 (632)
T ss_pred CCCcEEEEecCCCCchHHHHHHHHHHHHHHcCCCEEEEc
Confidence 345889999999998888887888888877788777775
No 373
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=26.04 E-value=1.3e+02 Score=27.46 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=26.5
Q ss_pred CCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 162 GLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 162 G~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
|=+|...+.....++..|+++|++|+++|.=-.|+
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~~ 41 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKHD 41 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 65455555666788999999999999999865443
No 374
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.00 E-value=95 Score=27.48 Aligned_cols=33 Identities=30% Similarity=0.141 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
+++.+.+.. ...-.++|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g-~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAG-IEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcC-CCCCEEEEECHHHHHHHHHHcCCc
Confidence 444454443 235689999999999998887654
No 375
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=25.95 E-value=1.6e+02 Score=22.17 Aligned_cols=28 Identities=18% Similarity=0.152 Sum_probs=21.0
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
|...+.....++..++++|.+|+++|.=
T Consensus 10 G~Gkst~~~~la~~~~~~~~~vl~~d~d 37 (104)
T cd02042 10 GVGKTTTAVNLAAALARRGKRVLLIDLD 37 (104)
T ss_pred CcCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 4444555677888888899999999853
No 376
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.86 E-value=1.1e+02 Score=27.22 Aligned_cols=32 Identities=22% Similarity=0.046 Sum_probs=22.0
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
+++.+.+. +..+-.++|.|.|+.++..++...
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 34444443 233458999999999999888643
No 377
>PHA02518 ParA-like protein; Provisional
Probab=25.75 E-value=1.7e+02 Score=25.34 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=26.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
|.+...=+|...+.....++..|+++|++|+++|.=-.+.
T Consensus 3 i~v~~~KGGvGKTT~a~~la~~la~~g~~vlliD~D~q~~ 42 (211)
T PHA02518 3 IAVLNQKGGAGKTTVATNLASWLHADGHKVLLVDLDPQGS 42 (211)
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 3344333343344555678888999999999999866554
No 378
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=25.72 E-value=4e+02 Score=23.95 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=38.7
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcc--cCCChHHHHHHHHHHHHhCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFY--NGGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~ 225 (433)
++++-|-+++- -+.+++.|.++|++|+..+.+.-..... ....+ .....+++.++++.+.+.++
T Consensus 11 ~vlItG~s~gI----G~~la~~l~~~G~~v~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (266)
T PRK06171 11 IIIVTGGSSGI----GLAIVKELLANGANVVNADIHGGDGQHE-NYQFVPTDVSSAEEVNHTVAEIIEKFG 76 (266)
T ss_pred EEEEeCCCChH----HHHHHHHHHHCCCEEEEEeCCccccccC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46676754322 2567888999999999998764321110 01111 12334688888888877764
No 379
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=25.57 E-value=1.4e+02 Score=28.16 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=30.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc
Q 013936 207 GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 207 ~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
..+.+++.++++++++.. .-++|.++|+.+++.+++-.
T Consensus 118 v~YW~El~~i~~w~~~~~----~s~LgICwGaQa~a~algGi 155 (302)
T PRK05368 118 VDYWDELKEILDWAKTHV----TSTLFICWAAQAALYHLYGI 155 (302)
T ss_pred CchHHHHHHHHHHHHHcC----CCEEEEcHHHHHHHHHcCCC
Confidence 345677999999998752 67899999999999877653
No 380
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=25.35 E-value=1.7e+02 Score=28.67 Aligned_cols=43 Identities=21% Similarity=0.201 Sum_probs=28.8
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC-CCCCCC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH-RGLGGI 197 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~-rG~G~s 197 (433)
.+|.+...=+|...+.-..+++..|+.+|++|+++|. -..|..
T Consensus 107 ~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ~nl 150 (388)
T PRK13705 107 PVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTA 150 (388)
T ss_pred eEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCCCch
Confidence 3444444333444444456788899999999999995 666654
No 381
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=25.32 E-value=1.1e+02 Score=27.80 Aligned_cols=20 Identities=25% Similarity=0.102 Sum_probs=17.1
Q ss_pred EEEEechhHHHHHHHHhhcC
Q 013936 230 YAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 230 ~lvG~S~GG~ia~~~a~~~~ 249 (433)
.+.|.|+|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999887643
No 382
>PRK09004 FMN-binding protein MioC; Provisional
Probab=25.28 E-value=3.8e+02 Score=21.96 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=25.1
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
|.++-|...++.+.+.+.+.+.+.+.|+.|.+.|..
T Consensus 4 i~I~ygS~tGnae~~A~~l~~~~~~~g~~~~~~~~~ 39 (146)
T PRK09004 4 ITLISGSTLGGAEYVADHLAEKLEEAGFSTETLHGP 39 (146)
T ss_pred EEEEEEcCchHHHHHHHHHHHHHHHcCCceEEeccC
Confidence 445555544456666677888888889998887753
No 383
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=25.24 E-value=69 Score=27.62 Aligned_cols=35 Identities=11% Similarity=0.237 Sum_probs=23.7
Q ss_pred EEEEECCCCCC-ChhHHHHHHHHHHHhCCceEEEEe
Q 013936 156 IVVVIPGLTSD-SAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 156 ~vvllHG~~g~-s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.||++|..... .....+..+++.+.++||+.+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 48999941111 122345788899999999998764
No 384
>PF08248 Tryp_FSAP: Tryptophyllin-3 skin active peptide; InterPro: IPR013266 PdT-3 or Tryptophyllin-3 peptide is a subfamily of the family Tryptophyllin and of the superfamily FSAP (Frog Skin Active Peptide). Originally identified in skin extracts of Neotropical leaf frogs, Phyllomedusa sp. This subfamily has an average length of 13 amino acids. The pharmacological activity of the tryptophyllins remains to be established [] but it seems that these peptides possess an action on liver protein synthesis and body weight []. It is thought to possesses insulin-releasing activity [].
Probab=25.18 E-value=44 Score=14.63 Aligned_cols=8 Identities=25% Similarity=0.663 Sum_probs=4.9
Q ss_pred CCCCCCCC
Q 013936 85 GRYLPTPW 92 (433)
Q Consensus 85 ~~y~p~~~ 92 (433)
++|||+|.
T Consensus 2 kpfw~ppi 9 (12)
T PF08248_consen 2 KPFWPPPI 9 (12)
T ss_pred CccCCCCc
Confidence 46777653
No 385
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=25.15 E-value=2e+02 Score=27.26 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=44.0
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC-CCCCCCCCC----Ccc--cCCChHHHHHHHHHHHHhC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG-LGGISLTSD----CFY--NGGWTEDLRRVIDYLHCQY 224 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG-~G~s~~~~~----~~~--~~~~~~Dl~~~i~~l~~~~ 224 (433)
|.+.|...++.+. +..+++.+.+.|.+.+++|.-+ .|.....+. ... ......|+.++++.++++.
T Consensus 2 iYlt~~~a~~~~~-~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~g 74 (316)
T PF13200_consen 2 IYLTAYSAGSPER-LDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHG 74 (316)
T ss_pred EEechhhcCCHHH-HHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCC
Confidence 4566654444344 4888899999999999999997 665433221 111 1122479999999998873
No 386
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=25.08 E-value=1.6e+02 Score=26.44 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=26.0
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
|.++-+=+|...+.....++..|+++|++|+++|.--
T Consensus 3 i~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 3 ITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4444444344455556678889999999999999854
No 387
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=25.05 E-value=1.7e+02 Score=27.92 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=27.0
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
+|.+.|-+|...+.....++..++++|++|.++|.-
T Consensus 33 ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 33 IIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 444458766666666677888899999999998763
No 388
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=25.00 E-value=1.3e+02 Score=27.49 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=29.2
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
++++|-.|+..+..++.+...+.++|.++|-++-
T Consensus 55 vLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k 88 (249)
T PF05673_consen 55 VLLWGARGTGKSSLVKALLNEYADQGLRLIEVSK 88 (249)
T ss_pred eEEecCCCCCHHHHHHHHHHHHhhcCceEEEECH
Confidence 6779998888888899999999999999887754
No 389
>PF14981 FAM165: FAM165 family
Probab=24.87 E-value=87 Score=20.02 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=17.5
Q ss_pred HhccCchhHHHHHHHHHHHHHHHH
Q 013936 20 SLSLIPLSHYFLFIFLIFIIFLYN 43 (433)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~ 43 (433)
.+..+|...|++++=.+++|+.|-
T Consensus 2 ~L~~vPlLlYILaaKtlilClaFA 25 (51)
T PF14981_consen 2 ALDNVPLLLYILAAKTLILCLAFA 25 (51)
T ss_pred chhhchHHHHHHHHHHHHHHHHHh
Confidence 456788889999887777666543
No 390
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=24.81 E-value=1.5e+02 Score=27.13 Aligned_cols=35 Identities=14% Similarity=0.043 Sum_probs=26.1
Q ss_pred CCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 162 GLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 162 G~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
|=+|...+.....++..|+++|++|+++|.=-.|+
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~~ 41 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKHD 41 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCcccc
Confidence 64455455556778889999999999999865554
No 391
>PRK14495 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion protein; Provisional
Probab=24.78 E-value=1.5e+02 Score=29.64 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=33.2
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
||-+-|..|+.....+..++..|.++||+|.++=+-+|+.
T Consensus 3 Vi~IvG~sgSGKTTLiekLI~~L~~rG~rVavIKH~hH~f 42 (452)
T PRK14495 3 VYGIIGWKDAGKTGLVERLVAAIAARGFSVSTVKHSHHDV 42 (452)
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeccCccc
Confidence 4556677677777888999999999999999998888774
No 392
>PRK06762 hypothetical protein; Provisional
Probab=24.75 E-value=1.3e+02 Score=25.10 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=18.2
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHH
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKM 179 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l 179 (433)
|.+|++-|..|+..+.+.+.+.+.+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~~l 26 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQERL 26 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 6788889999887776655555554
No 393
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A.
Probab=24.75 E-value=1.1e+02 Score=25.81 Aligned_cols=43 Identities=16% Similarity=0.259 Sum_probs=26.3
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~ 194 (433)
...+.+++++|-.|...+...+.+...+.+++..++..+....
T Consensus 21 ~~~~~~~ll~G~~G~GKT~ll~~~~~~~~~~~~~~~~~~~~~~ 63 (185)
T PF13191_consen 21 SGSPRNLLLTGESGSGKTSLLRALLDRLAERGGYVISINCDDS 63 (185)
T ss_dssp S-----EEE-B-TTSSHHHHHHHHHHHHHHHT--EEEEEEETT
T ss_pred cCCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 3445689999999988888888888888776534777666544
No 394
>PRK12467 peptide synthase; Provisional
Probab=24.71 E-value=2.6e+02 Score=36.87 Aligned_cols=86 Identities=16% Similarity=0.077 Sum_probs=53.7
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
.+.++..|...+..- .| ..+...+. .+..++.+..++.-.-.. ....+.+-.....++++...+..+..+.|
T Consensus 3692 ~~~l~~~h~~~r~~~-~~-~~l~~~l~-~~~~~~~l~~~~~~~d~~-----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g 3763 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DY-EPLAVILE-GDRHVLGLTCRHLLDDGW-----QDTSLQAMAVQYADYILWQQAKGPYGLLG 3763 (3956)
T ss_pred ccceeeechhhcchh-hh-HHHHHHhC-CCCcEEEEeccccccccC-----CccchHHHHHHHHHHHHHhccCCCeeeee
Confidence 356899998766532 22 45555553 357888888776432111 11112222345566777777777899999
Q ss_pred echhHHHHHHHHhh
Q 013936 234 TSIGANILVKYLGE 247 (433)
Q Consensus 234 ~S~GG~ia~~~a~~ 247 (433)
+|+||.++..++..
T Consensus 3764 ~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3764 WSLGGTLARLVAEL 3777 (3956)
T ss_pred eecchHHHHHHHHH
Confidence 99999999876543
No 395
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=24.68 E-value=1.1e+02 Score=26.05 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=24.3
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEE
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~ 189 (433)
|+++.|+.|+.....++.+.+ ...+|.++.++
T Consensus 2 v~ii~GfLGsGKTTli~~ll~-~~~~~~~~~vI 33 (178)
T PF02492_consen 2 VIIITGFLGSGKTTLINHLLK-RNRQGERVAVI 33 (178)
T ss_dssp EEEEEESTTSSHHHHHHHHHH-HHTTTS-EEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHH-HhcCCceeEEE
Confidence 688999999888888888887 44567776666
No 396
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=24.59 E-value=1.1e+02 Score=28.14 Aligned_cols=35 Identities=23% Similarity=0.107 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCC
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
+++.+.+......=.++|.|.||.++..++.....
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 44455444211134899999999999998876543
No 397
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=24.59 E-value=1.6e+02 Score=28.76 Aligned_cols=42 Identities=17% Similarity=0.160 Sum_probs=28.8
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
.+|.+...=+|...+.....++..|+.+|++|+++|.=-.|.
T Consensus 105 ~vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~DpQ~~ 146 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDLDPQAS 146 (387)
T ss_pred eEEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEecCCCCC
Confidence 445555544444455555678888999999999999865553
No 398
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=24.54 E-value=83 Score=31.92 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=34.9
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~r 192 (433)
...|+||++-|+-++....-++.+...+..+||+|+.+--|
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P 336 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP 336 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc
Confidence 56799999999987777778899999999999999988443
No 399
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=24.52 E-value=3.7e+02 Score=22.66 Aligned_cols=79 Identities=22% Similarity=0.219 Sum_probs=47.3
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCC---CcccCCChHHHHHHHHHHHHhCCCCcEEEEEe
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSD---CFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~---~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~ 234 (433)
|++.|.++ |. .....+...+..-|..+...+-....... ..+ -....|.+.++.++++.++++ +.+++++--
T Consensus 33 I~i~G~G~-S~-~~A~~~~~~l~~~g~~~~~~~~~~~~~~~-~~Dv~I~iS~sG~t~~~i~~~~~ak~~--g~~ii~IT~ 107 (179)
T TIGR03127 33 IFVAGAGR-SG-LVGKAFAMRLMHLGFNVYVVGETTTPSIK-KGDLLIAISGSGETESLVTVAKKAKEI--GATVAAITT 107 (179)
T ss_pred EEEEecCH-HH-HHHHHHHHHHHhCCCeEEEeCCcccCCCC-CCCEEEEEeCCCCcHHHHHHHHHHHHC--CCeEEEEEC
Confidence 67777643 32 23356677788889999888543322111 111 123357788999999988775 456766655
Q ss_pred chhHHHH
Q 013936 235 SIGANIL 241 (433)
Q Consensus 235 S~GG~ia 241 (433)
+.++-++
T Consensus 108 ~~~s~la 114 (179)
T TIGR03127 108 NPESTLG 114 (179)
T ss_pred CCCCchH
Confidence 5555544
No 400
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=24.45 E-value=81 Score=32.34 Aligned_cols=83 Identities=18% Similarity=0.206 Sum_probs=43.7
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCc-------eEEEEeCCCCCCCC----CCCCC-cccCC----C---hHHHHHHH
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGW-------NVVVSNHRGLGGIS----LTSDC-FYNGG----W---TEDLRRVI 217 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~-------~vv~~d~rG~G~s~----~~~~~-~~~~~----~---~~Dl~~~i 217 (433)
-|++-|. |+..-...+.++..+.+.|. +++.+|..|.=..+ .+..+ .|-.. . ..++.+++
T Consensus 299 riv~~GA-GsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v 377 (559)
T PTZ00317 299 RIVFFGA-GSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVV 377 (559)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHH
Confidence 3555565 33333333455566666787 99999999932211 11100 01100 0 23556665
Q ss_pred HHHHHhCCCCcEEEEEech-hHHHHHHHHh
Q 013936 218 DYLHCQYPEVPLYAVGTSI-GANILVKYLG 246 (433)
Q Consensus 218 ~~l~~~~~~~~i~lvG~S~-GG~ia~~~a~ 246 (433)
+.++ |-+++|.|- ||...-....
T Consensus 378 ~~~K------PtvLIG~S~~~g~Ft~evv~ 401 (559)
T PTZ00317 378 RFVK------PTALLGLSGVGGVFTEEVVK 401 (559)
T ss_pred hccC------CCEEEEecCCCCCCCHHHHH
Confidence 5443 468999996 6655444433
No 401
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=24.31 E-value=78 Score=27.17 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=31.2
Q ss_pred CCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 207 GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 207 ~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
..+.+++.+++++.+++. .-.+|.++|+.+++.++.-.+
T Consensus 81 v~Yw~El~~i~dwa~~~v----~stl~iCWgaqaal~~~yGi~ 119 (175)
T cd03131 81 VDYWEELTEILDWAKTHV----TSTLFSCWAAMAALYYFYGIK 119 (175)
T ss_pred cchHHHHHHHHHHHHHhC----cchHHHHHHHHHHHHHHcCcc
Confidence 345578999999999764 568899999999998876543
No 402
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=24.15 E-value=95 Score=28.69 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=17.9
Q ss_pred CCcEEEEEechhHHHHHHHHhh
Q 013936 226 EVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 226 ~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
-.|-.++|||+|=..|+..++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhCC
Confidence 5688999999999888766543
No 403
>TIGR00750 lao LAO/AO transport system ATPase. Mutations have also been found that do not phosphorylate the periplasmic binding proteins, yet still allow transport. The ATPase activity of this protein seems to be necessary, however.
Probab=23.88 E-value=1.9e+02 Score=27.14 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=29.8
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
+.++.+-|.+|+..+..+..++..+.++|++|.+++.
T Consensus 34 ~~~i~i~G~~G~GKttl~~~l~~~~~~~~~~v~~i~~ 70 (300)
T TIGR00750 34 AHRVGITGTPGAGKSTLLEALGMELRRRGLKVAVIAV 70 (300)
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4456666998988888889999999899999887764
No 404
>PTZ00062 glutaredoxin; Provisional
Probab=23.87 E-value=5e+02 Score=22.84 Aligned_cols=82 Identities=20% Similarity=0.245 Sum_probs=51.5
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCC-cEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV-PLY 230 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~-~i~ 230 (433)
...|+|||.-|.+..+.-.|.+.....|.+.|.....+|..- -+++++.+...... +.- .++
T Consensus 111 ~~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~----------------d~~~~~~l~~~sg~-~TvPqVf 173 (204)
T PTZ00062 111 RNHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFE----------------DPDLREELKVYSNW-PTYPQLY 173 (204)
T ss_pred hcCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCC----------------CHHHHHHHHHHhCC-CCCCeEE
Confidence 357899999997655566777777788888776666666530 03444444433222 222 366
Q ss_pred EEEechhHHHHHHHHhhcCC
Q 013936 231 AVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 231 lvG~S~GG~ia~~~a~~~~~ 250 (433)
+=|--+||.--+.-+.+.++
T Consensus 174 I~G~~IGG~d~l~~l~~~G~ 193 (204)
T PTZ00062 174 VNGELIGGHDIIKELYESNS 193 (204)
T ss_pred ECCEEEcChHHHHHHHHcCC
Confidence 66777899887766666554
No 405
>PRK14491 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional
Probab=23.74 E-value=1.8e+02 Score=30.49 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=35.7
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
.|+=+=|..|+.....+..++..|.++||+|.++-+-+|+..
T Consensus 11 ~vi~ivG~s~sGKTTlie~li~~L~~~G~rVavIKh~~h~~d 52 (597)
T PRK14491 11 PLLGFCAYSGTGKTTLLEQLIPELNQRGLRLAVIKHAHHNFD 52 (597)
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHHhCCceEEEEEcCCcCCC
Confidence 367777887777888889999999999999999999888753
No 406
>PF05707 Zot: Zonular occludens toxin (Zot); InterPro: IPR008900 This entry consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophage present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.; PDB: 2R2A_B.
Probab=23.72 E-value=1e+02 Score=26.71 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=19.7
Q ss_pred EEEECCCCCCChhHHHHHH-HHHHHhCCceEEEEeCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHL-AFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~-~~~l~~~G~~vv~~d~rG~G 195 (433)
|.++.|.+|+..+.+.-.. +....++|-.|++ |.+|.-
T Consensus 2 I~~~~G~pGsGKS~~av~~~i~~~l~~gr~V~t-ni~gL~ 40 (193)
T PF05707_consen 2 IYLITGKPGSGKSYYAVSYVIIPALKKGRPVYT-NIPGLN 40 (193)
T ss_dssp EEEEE--TTSSHHHHHHHHHHH-GGGS---EEE---TTB-
T ss_pred EEEEEcCCCCcHhHHHHHHHHHHHHhCCCEEEE-ccCCcc
Confidence 6788999988766554333 5555667877777 999865
No 407
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.70 E-value=1.2e+02 Score=27.30 Aligned_cols=34 Identities=15% Similarity=-0.048 Sum_probs=23.1
Q ss_pred HHHHHHHhC-CCCcEEEEEechhHHHHHHHHhhcC
Q 013936 216 VIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 216 ~i~~l~~~~-~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
+++.+.++. ....-.++|.|.|+.++..|+....
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 445555442 1113479999999999999987653
No 408
>PRK06179 short chain dehydrogenase; Provisional
Probab=23.62 E-value=3.4e+02 Score=24.51 Aligned_cols=65 Identities=14% Similarity=0.135 Sum_probs=37.4
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCccc--CCChHHHHHHHHHHHHhCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN--GGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~--~~~~~Dl~~~i~~l~~~~~ 225 (433)
.+++-|-+|. .-..++..|.++|++|++.+...-.......-..+. ....+++.++++.+.+.++
T Consensus 6 ~vlVtGasg~----iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 6 VALVTGASSG----IGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred EEEEecCCCH----HHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 4566674332 125788899999999999886531111110011111 2334678888888877654
No 409
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=23.46 E-value=77 Score=29.97 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=19.6
Q ss_pred HhCCCCcEEEEEechhHHHHHHHHhh
Q 013936 222 CQYPEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 222 ~~~~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
+..+-.|-+++|||+|=..|+..++.
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 79 RSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred cccccccceeeccchhhHHHHHHCCc
Confidence 34456788999999999888755543
No 410
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=23.29 E-value=1.3e+02 Score=28.09 Aligned_cols=24 Identities=21% Similarity=0.178 Sum_probs=19.0
Q ss_pred CCCCcEEEEEechhHHHHHHHHhh
Q 013936 224 YPEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 224 ~~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
.+..|-.++|||+|-..|+..++.
T Consensus 73 ~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 73 LLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred cCCCCcEEeecCHHHHHHHHHhCC
Confidence 345789999999999888866553
No 411
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=23.24 E-value=1.4e+02 Score=25.32 Aligned_cols=33 Identities=24% Similarity=0.106 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcC
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~ 249 (433)
+++.+.++. ...=.++|.|.|+.++..++....
T Consensus 18 vl~~L~e~g-~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRALEEEG-IEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHCC-CCeeEEEEeCHHHHHHHHHHcCCC
Confidence 344444432 335689999999999998887543
No 412
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=23.23 E-value=5.9e+02 Score=23.38 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=27.3
Q ss_pred EEEECCCCC---CChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 157 VVVIPGLTS---DSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 157 vvllHG~~g---~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
+++.|..+. +..+.+...+++.|.+.|+.|.++......
T Consensus 2 Lii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~ 43 (377)
T cd03798 2 LVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWG 43 (377)
T ss_pred eEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCC
Confidence 445555442 335567788999999999999999765543
No 413
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.11 E-value=5.4e+02 Score=26.10 Aligned_cols=89 Identities=19% Similarity=0.159 Sum_probs=53.2
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechh
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIG 237 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~G 237 (433)
+|=-|.+++ .+...+.-+++..++||.||.+|--|.-.-. +-+...+.-+........|+.||--+=
T Consensus 442 lfekGYgkd-~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~------------~~lm~~l~k~~~~~~pd~i~~vgealv 508 (587)
T KOG0781|consen 442 LFEKGYGKD-AAGVAKEAIQEARNQGFDVVLIDTAGRMHNN------------APLMTSLAKLIKVNKPDLILFVGEALV 508 (587)
T ss_pred HHhhhcCCC-hHHHHHHHHHHHHhcCCCEEEEeccccccCC------------hhHHHHHHHHHhcCCCceEEEehhhhh
Confidence 566688665 3444466777888899999999988743321 113333333333333446889998888
Q ss_pred HHHHHHHH-------hhcCCCCCceEEEE
Q 013936 238 ANILVKYL-------GENGVNTPLVGAAA 259 (433)
Q Consensus 238 G~ia~~~a-------~~~~~~~~v~~~v~ 259 (433)
|+=++.-+ +.++....|+++++
T Consensus 509 g~dsv~q~~~fn~al~~~~~~r~id~~~l 537 (587)
T KOG0781|consen 509 GNDSVDQLKKFNRALADHSTPRLIDGILL 537 (587)
T ss_pred CcHHHHHHHHHHHHHhcCCCccccceEEE
Confidence 77766332 22332224777665
No 414
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=23.10 E-value=1.4e+02 Score=25.20 Aligned_cols=32 Identities=25% Similarity=0.078 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCCcEEEEEechhHHHHHHHHhhc
Q 013936 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 216 ~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~ 248 (433)
+++.+.++. ...=.++|.|.|+.++..++...
T Consensus 18 vl~~L~~~~-~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAG-IPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcC-CCeeEEEEECHHHHHHHHHHcCC
Confidence 444554432 23458999999999999887543
No 415
>PRK09739 hypothetical protein; Provisional
Probab=23.08 E-value=4.9e+02 Score=22.46 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=25.2
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
+|..|.-.++......+.+++.+.++|..|..+|+....
T Consensus 8 iI~~sp~~~s~s~~l~~~~~~~~~~~g~~v~~~dL~~~~ 46 (199)
T PRK09739 8 LVWAHPRHDSLTAKVAEAIHQRAQERGHQVEELDLYRSG 46 (199)
T ss_pred EEEcCCCCCCcHHHHHHHHHHHHHHCCCEEEEEEhhhhC
Confidence 444444433333445567777788889999999987643
No 416
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=23.00 E-value=4.4e+02 Score=24.83 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=48.2
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCC--ceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHG--WNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G--~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
.+.|++|=..|...+.| +.+.+.+.+++ |.|+...+ -.|..+-.+++...++.+.++|. +.+.++
T Consensus 215 ~ikv~lHla~g~~n~~y-~~~fd~ltk~nvdfDVig~Sy-----------YpyWhgtl~nL~~nl~dia~rY~-K~VmV~ 281 (403)
T COG3867 215 TIKVALHLAEGENNSLY-RWIFDELTKRNVDFDVIGSSY-----------YPYWHGTLNNLTTNLNDIASRYH-KDVMVV 281 (403)
T ss_pred CceEEEEecCCCCCchh-hHHHHHHHHcCCCceEEeeec-----------cccccCcHHHHHhHHHHHHHHhc-CeEEEE
Confidence 35678886656656677 88899998875 66765533 23444567889999999999984 456666
Q ss_pred Eech
Q 013936 233 GTSI 236 (433)
Q Consensus 233 G~S~ 236 (433)
-.|.
T Consensus 282 Etay 285 (403)
T COG3867 282 ETAY 285 (403)
T ss_pred Eecc
Confidence 6554
No 417
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=22.96 E-value=1.8e+02 Score=26.14 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=27.0
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
+|.+.-+=+|...+.....++..++++|++|+++|.=-
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 34455544454455556678888999999999999854
No 418
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=22.64 E-value=1.7e+02 Score=28.36 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=29.1
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~ 198 (433)
|||+|+.. . ..| +.+++.|.++|+.|.++-..+.+..+
T Consensus 2 il~~~~~~--p-~~~-~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNF--P-GQF-RHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCC--c-hhH-HHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 68888742 2 234 88999999999999999888866544
No 419
>PRK06523 short chain dehydrogenase; Provisional
Probab=22.54 E-value=4.9e+02 Score=23.21 Aligned_cols=64 Identities=13% Similarity=0.007 Sum_probs=36.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcc--cCCChHHHHHHHHHHHHhCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFY--NGGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~ 225 (433)
.+++.|-+|+- =..+++.|.++|++|++.+...-..... .-... .....+++.++++.+.+.++
T Consensus 11 ~vlItGas~gI----G~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 11 RALVTGGTKGI----GAATVARLLEAGARVVTTARSRPDDLPE-GVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred EEEEECCCCch----hHHHHHHHHHCCCEEEEEeCChhhhcCC-ceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46777754432 2467888889999999987653211110 00011 12334677777877777654
No 420
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=22.53 E-value=3.4e+02 Score=20.41 Aligned_cols=81 Identities=20% Similarity=0.321 Sum_probs=47.8
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCc-EEE
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP-LYA 231 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~-i~l 231 (433)
..++|||..|....+...|.....+.|.+.|.....+|..- . .++.+.+..+... +..| +++
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~--------~--------~~~~~~l~~~tg~-~tvP~vfi 73 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE--------D--------PEIRQGIKEYSNW-PTIPQLYV 73 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC--------C--------HHHHHHHHHHhCC-CCCCEEEE
Confidence 46889999987444445666667777888887666666520 0 2233333332222 2334 555
Q ss_pred EEechhHHHHHHHHhhcCC
Q 013936 232 VGTSIGANILVKYLGENGV 250 (433)
Q Consensus 232 vG~S~GG~ia~~~a~~~~~ 250 (433)
=|...||.--+.-+.+.++
T Consensus 74 ~g~~iGG~ddl~~l~~~g~ 92 (97)
T TIGR00365 74 KGEFVGGCDIIMEMYQSGE 92 (97)
T ss_pred CCEEEeChHHHHHHHHCcC
Confidence 5677899887766655554
No 421
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=22.41 E-value=4.8e+02 Score=23.04 Aligned_cols=91 Identities=21% Similarity=0.207 Sum_probs=47.2
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCce-EEEEeCCCCC--CCCC------CCCCc-ccCCChHHHHH------H
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWN-VVVSNHRGLG--GISL------TSDCF-YNGGWTEDLRR------V 216 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~-vv~~d~rG~G--~s~~------~~~~~-~~~~~~~Dl~~------~ 216 (433)
..+.|++++--.+. ...+.+.+.+.+.+.|.. +..++.+... .++. ..+.. ...+.+.-+.+ +
T Consensus 28 ~~~~i~~iptA~~~-~~~~~~~~~~~~~~lG~~~v~~~~~~~~~~a~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~l 106 (217)
T cd03145 28 AGARIVVIPAASEE-PAEVGEEYRDVFERLGAREVEVLVIDSREAANDPEVVARLRDADGIFFTGGDQLRITSALGGTPL 106 (217)
T ss_pred CCCcEEEEeCCCcC-hhHHHHHHHHHHHHcCCceeEEeccCChHHcCCHHHHHHHHhCCEEEEeCCcHHHHHHHHcCChH
Confidence 34567777765443 456667778888888874 5555544221 1110 00001 11233222221 1
Q ss_pred HHHHHHhCCCCcEEEEEechhHHHHHHHH
Q 013936 217 IDYLHCQYPEVPLYAVGTSIGANILVKYL 245 (433)
Q Consensus 217 i~~l~~~~~~~~i~lvG~S~GG~ia~~~a 245 (433)
.+.|+..+. .-.+++|.|.|+++...++
T Consensus 107 ~~~l~~~~~-~G~v~~G~SAGA~i~~~~~ 134 (217)
T cd03145 107 LDALRKVYR-GGVVIGGTSAGAAVMSDTM 134 (217)
T ss_pred HHHHHHHHH-cCCEEEEccHHHHhhhhcc
Confidence 222333321 2478999999999987654
No 422
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=22.32 E-value=2.9e+02 Score=27.47 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=46.3
Q ss_pred CcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
...+.++||-.|++ |.+.+..++.+. .+ ..+.+.......-..+..+.+.++++.+.+++..+-|+++.
T Consensus 27 ~~~~pi~HGsqGC~---y~~~~~~hf~e~-~~-------~~~~t~l~e~~~v~G~~~~~L~~~i~~~~~~~~P~~I~V~t 95 (422)
T TIGR02015 27 DRAATVLAGSACCV---YGLTFVSHFYGA-RR-------SVGYVPFDSEQLVTGKLFEDVRCSVHKLADPASYDAIVVIN 95 (422)
T ss_pred CCcEEEecCCCcch---hhhHhHHHhccc-cc-------ccCccccCCCceEeCchHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 34689999998875 545566655432 11 11223332222222223588889998888877656677777
Q ss_pred echhHHHHH
Q 013936 234 TSIGANILV 242 (433)
Q Consensus 234 ~S~GG~ia~ 242 (433)
..+-+.+.-
T Consensus 96 TC~se~IGd 104 (422)
T TIGR02015 96 LCVPTASGV 104 (422)
T ss_pred CCcHHHhcC
Confidence 777666543
No 423
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=22.30 E-value=4.4e+02 Score=24.46 Aligned_cols=68 Identities=18% Similarity=0.009 Sum_probs=40.7
Q ss_pred hhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhH
Q 013936 168 AAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGA 238 (433)
Q Consensus 168 ~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG 238 (433)
.+.+ +.+++.+++.|+.=+.+|--=.+.-...........-..|+.++++|.+++ +..|.++.||-++
T Consensus 31 t~~~-k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~K--gVgi~lw~~~~~~ 98 (273)
T PF10566_consen 31 TETQ-KRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEK--GVGIWLWYHSETG 98 (273)
T ss_dssp HHHH-HHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHT--T-EEEEEEECCHT
T ss_pred HHHH-HHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHc--CCCEEEEEeCCcc
Confidence 4555 789999999999888886532221000001111112237999999999987 4569999999983
No 424
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=22.28 E-value=4.5e+02 Score=21.67 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=38.0
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEE
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG 233 (433)
+.-+.-.|.+|.........+...+.....+++++..=+. ... .......+.+++.++++.++++ +.++++++
T Consensus 36 ~~~v~n~g~~G~~~~~~~~~l~~~~~~~~pd~v~i~~G~N-D~~---~~~~~~~~~~~l~~li~~~~~~--~~~vil~~ 108 (177)
T cd01822 36 DVTVINAGVSGDTTAGGLARLPALLAQHKPDLVILELGGN-DGL---RGIPPDQTRANLRQMIETAQAR--GAPVLLVG 108 (177)
T ss_pred CeEEEecCcCCcccHHHHHHHHHHHHhcCCCEEEEeccCc-ccc---cCCCHHHHHHHHHHHHHHHHHC--CCeEEEEe
Confidence 3456667776655444434444455554677776653221 110 0011123446677777777665 45566665
No 425
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=22.19 E-value=6e+02 Score=25.09 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=52.5
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCC-------cccCCC--------h-HH----HH
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC-------FYNGGW--------T-ED----LR 214 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~-------~~~~~~--------~-~D----l~ 214 (433)
|+|+++ |...+..+.+ ..+.+.+.+.|..|+.+|--=.|......+- ....++ - +- ..
T Consensus 2 ~tI~ii-gT~DTK~~E~-~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ 79 (403)
T PF06792_consen 2 KTIAII-GTLDTKGEEL-LYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMAR 79 (403)
T ss_pred CEEEEE-EccCCCHHHH-HHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHH
Confidence 455555 4434443333 5566778889999999998555543321110 000001 0 00 11
Q ss_pred HHHHHHHHhCC---CCcEEEEEechhHHHHHHHHhhcCC
Q 013936 215 RVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 215 ~~i~~l~~~~~---~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
.+...+.+.+. -.-++.+|-|.|..++...+..-|-
T Consensus 80 ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPi 118 (403)
T PF06792_consen 80 GAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPI 118 (403)
T ss_pred HHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCC
Confidence 22223333343 2348899999999999988887665
No 426
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=22.18 E-value=1.7e+02 Score=26.93 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=28.0
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
|-+. |=+|...+...-+++..|++.|++|+++|.=-.|.
T Consensus 4 iav~-~KGGVGKTT~~~nLA~~La~~G~rVLlID~Dpq~~ 42 (274)
T PRK13235 4 VAIY-GKGGIGKSTTTQNTVAGLAEMGKKVMVVGCDPKAD 42 (274)
T ss_pred EEEe-CCCCccHHHHHHHHHHHHHHCCCcEEEEecCCccc
Confidence 4455 54454455566788999999999999998854443
No 427
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=22.18 E-value=5.8e+02 Score=23.74 Aligned_cols=40 Identities=5% Similarity=0.018 Sum_probs=28.1
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
++++.|.+..+..+.++..+++.|.++||.|.++-.++..
T Consensus 2 Il~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~ 41 (358)
T cd03812 2 ILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEE 41 (358)
T ss_pred EEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCC
Confidence 4556665444445677788999998899998877766533
No 428
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=22.17 E-value=1.7e+02 Score=26.12 Aligned_cols=36 Identities=31% Similarity=0.329 Sum_probs=23.4
Q ss_pred cEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 155 p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
|.+|++-|-. +... -..++..++++||.|++--.|-
T Consensus 7 ~k~VlItgcs--~GGI-G~ala~ef~~~G~~V~AtaR~~ 42 (289)
T KOG1209|consen 7 PKKVLITGCS--SGGI-GYALAKEFARNGYLVYATARRL 42 (289)
T ss_pred CCeEEEeecC--Ccch-hHHHHHHHHhCCeEEEEEcccc
Confidence 3356666532 2222 2468899999999999986653
No 429
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=22.12 E-value=2.9e+02 Score=23.34 Aligned_cols=78 Identities=15% Similarity=0.197 Sum_probs=40.5
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhC---CceEEEEeCCCCCCCCCCC--CCcccCCChHHHHHHHHHHHHhCCCCcEE
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTS--DCFYNGGWTEDLRRVIDYLHCQYPEVPLY 230 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~---G~~vv~~d~rG~G~s~~~~--~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 230 (433)
.-++-.|.+|.........+-..+.+. ...++++.. |.-...... .......+.+.+..+++.+++..++.+++
T Consensus 33 ~~v~N~g~~G~t~~~~~~~~~~~~~~~~~~~pd~vii~~-G~ND~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ii 111 (199)
T cd01838 33 LDVINRGFSGYNTRWALKVLPKIFLEEKLAQPDLVTIFF-GANDAALPGQPQHVPLDEYKENLRKIVSHLKSLSPKTKVI 111 (199)
T ss_pred hheeccCCCcccHHHHHHHHHHhcCccccCCceEEEEEe-cCccccCCCCCCcccHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 346667887754433333333333333 466666633 211111000 00112234467888888888877777777
Q ss_pred EEEe
Q 013936 231 AVGT 234 (433)
Q Consensus 231 lvG~ 234 (433)
+++.
T Consensus 112 ~~t~ 115 (199)
T cd01838 112 LITP 115 (199)
T ss_pred EeCC
Confidence 7763
No 430
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=22.08 E-value=2.1e+02 Score=26.44 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=27.8
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
+++++ |-+|...+.-...++..+.+.|++|..+|.
T Consensus 74 vi~l~-G~~G~GKTTt~akLA~~l~~~g~~V~li~~ 108 (272)
T TIGR00064 74 VILFV-GVNGVGKTTTIAKLANKLKKQGKSVLLAAG 108 (272)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 44455 988887777778888889889999988874
No 431
>PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. Ornithine decarboxylase from Lactobacillus 30a (L30a OrnDC, P43099 from SWISSPROT) is representative of the large, pyridoxal-5'-phosphate-dependent decarboxylases that act on lysine, arginine or ornithine. The crystal structure of the L30a OrnDC has been solved to 3.0 A resolution. Six dimers related by C6 symmetry compose the enzymatically active dodecamer (approximately 106 Da). Each monomer of L30a OrnDC can be described in terms of five sequential folding domains. The amino-terminal domain, residues 1 to 107, consists of a five-stranded beta-sheet termed the "wing" domain. Two wing domains of each dimer project inward towards the centre of the dodecamer and contribute to dodecamer stabilisation [].; GO: 0016831 carboxy-lyase activity; PDB: 3Q16_C 3N75_A 1C4K_A 1ORD_A 2VYC_D.
Probab=21.95 E-value=2.7e+02 Score=21.80 Aligned_cols=66 Identities=14% Similarity=0.183 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhCCceEEEEeCCCCCCCC---CCCCCcccCCCh----HHHHHHHHHHHHhCCCCcEEEEEech
Q 013936 171 YIKHLAFKMAGHGWNVVVSNHRGLGGIS---LTSDCFYNGGWT----EDLRRVIDYLHCQYPEVPLYAVGTSI 236 (433)
Q Consensus 171 y~~~~~~~l~~~G~~vv~~d~rG~G~s~---~~~~~~~~~~~~----~Dl~~~i~~l~~~~~~~~i~lvG~S~ 236 (433)
..+.+...|.+.|+.|+..+...-+..- .+.-...--.|- ++..++++.++.+..+-|+++++-.-
T Consensus 5 ~~~~l~~~L~~~~~~vv~~~~~dd~~~~i~~~~~i~avvi~~d~~~~~~~~~ll~~i~~~~~~iPVFl~~~~~ 77 (115)
T PF03709_consen 5 ASRELAEALEQRGREVVDADSTDDALAIIESFTDIAAVVISWDGEEEDEAQELLDKIRERNFGIPVFLLAERD 77 (115)
T ss_dssp HHHHHHHHHHHTTTEEEEESSHHHHHHHHHCTTTEEEEEEECHHHHHHHHHHHHHHHHHHSTT-EEEEEESCC
T ss_pred HHHHHHHHHHHCCCEEEEeCChHHHHHHHHhCCCeeEEEEEcccccchhHHHHHHHHHHhCCCCCEEEEecCC
Confidence 4577888888889999988765411100 000111112343 56778899999988888999998755
No 432
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=21.70 E-value=1.5e+02 Score=22.28 Aligned_cols=32 Identities=9% Similarity=0.179 Sum_probs=19.4
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCce-EEEE
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWN-VVVS 189 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~-vv~~ 189 (433)
+.+++||+|.+ |. .+ ...+..|.+.||. |+.+
T Consensus 60 ~~~~ivvyC~~--G~-rs---~~a~~~L~~~G~~~v~~l 92 (101)
T cd01518 60 KGKKVLMYCTG--GI-RC---EKASAYLKERGFKNVYQL 92 (101)
T ss_pred CCCEEEEECCC--ch-hH---HHHHHHHHHhCCcceeee
Confidence 45688888875 32 22 1245567788995 5444
No 433
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=21.70 E-value=1.4e+02 Score=30.16 Aligned_cols=106 Identities=21% Similarity=0.141 Sum_probs=58.1
Q ss_pred CcEEEEECCCCC--CChh--HHHHHHHHHHHhC-CceEEEEeCCC--CCCCCC--CCCCcccCCChHHHHHHHHHHHHh-
Q 013936 154 NPIVVVIPGLTS--DSAA--AYIKHLAFKMAGH-GWNVVVSNHRG--LGGISL--TSDCFYNGGWTEDLRRVIDYLHCQ- 223 (433)
Q Consensus 154 ~p~vvllHG~~g--~s~~--~y~~~~~~~l~~~-G~~vv~~d~rG--~G~s~~--~~~~~~~~~~~~Dl~~~i~~l~~~- 223 (433)
..++|.+-|.+- ++.+ .| -.+.|+.. .-.||.+|+|= +|---. ..+...+.|. -|-.-++.++++.
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvY---dGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl-~DQqLAl~WV~~Ni 210 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVY---DGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL-LDQQLALQWVQENI 210 (601)
T ss_pred ceEEEEEEcCccccCCcceeee---ccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch-HHHHHHHHHHHHhH
Confidence 336777877321 1111 22 12334443 46777888883 443221 1122222233 4666778888876
Q ss_pred --CC--CCcEEEEEechhHHHHHHHHhhcCCCCCceEEEEEcCC
Q 013936 224 --YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (433)
Q Consensus 224 --~~--~~~i~lvG~S~GG~ia~~~a~~~~~~~~v~~~v~i~~p 263 (433)
++ .+++.++|-|.|+.-+..-+..-+....++.+|+-|+.
T Consensus 211 ~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 211 AAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred HHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 22 35799999999998776444333333346666666643
No 434
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=21.68 E-value=1.9e+02 Score=27.13 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=27.7
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G 195 (433)
|.+. |=+|...+.....++..|+++|++|+++|.==.+
T Consensus 3 Iav~-gKGGvGKTT~a~nLA~~La~~g~rVLlID~Dpq~ 40 (296)
T TIGR02016 3 IAIY-GKGGSGKSFTTTNLSHMMAEMGKRVLQLGCDPKH 40 (296)
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHHCCCeEEEEEecCCC
Confidence 3444 6555556666678899999999999999985433
No 435
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=21.60 E-value=2.4e+02 Score=25.79 Aligned_cols=39 Identities=10% Similarity=0.177 Sum_probs=29.2
Q ss_pred CCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeC
Q 013936 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (433)
Q Consensus 153 ~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~ 191 (433)
...+|.+.-+-+|...+.....++..+++.|.+|+++|.
T Consensus 102 ~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 102 GRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 344566666665655666667888999999999999988
No 436
>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).
Probab=21.58 E-value=2.1e+02 Score=24.35 Aligned_cols=37 Identities=24% Similarity=0.526 Sum_probs=30.1
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
+|.+=|..|+..+...+.+++.+.++|+.|+....+.
T Consensus 2 ~I~ieG~~GsGKtT~~~~L~~~l~~~g~~v~~~~~~~ 38 (200)
T cd01672 2 FIVFEGIDGAGKTTLIELLAERLEARGYEVVLTREPG 38 (200)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 4566688888788888888899988999999887765
No 437
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.52 E-value=2e+02 Score=27.30 Aligned_cols=47 Identities=28% Similarity=0.480 Sum_probs=38.2
Q ss_pred CCCCcEEEEECCCCCCChhHHHHHHHHHHHh-CCceEEEEeCCCCCCC
Q 013936 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGI 197 (433)
Q Consensus 151 ~~~~p~vvllHG~~g~s~~~y~~~~~~~l~~-~G~~vv~~d~rG~G~s 197 (433)
-+.+|+=++++.-.|+..+.+-|.+.+.+.+ -|-.+++-|.+|-|+.
T Consensus 25 ~P~~~it~Ivp~~~GGg~D~~aR~~~~~l~k~lg~~v~V~N~pGagG~ 72 (319)
T COG3181 25 YPERPITIIVPAAAGGGTDQTARALAESLSKELGQPVVVDNKPGAGGA 72 (319)
T ss_pred CCCCCeEEEEecCCCChHHHHHHHHHHHHHHHhCCCEEEEecCCCcch
Confidence 3567778889988888888887877777766 4889999999998874
No 438
>PRK07952 DNA replication protein DnaC; Validated
Probab=21.50 E-value=1.7e+02 Score=26.65 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=28.5
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
-++++|-+|...+.....++..+.++|..|+.++
T Consensus 101 ~~~l~G~~GtGKThLa~aia~~l~~~g~~v~~it 134 (244)
T PRK07952 101 SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIIT 134 (244)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 5788898888888888888899988899998884
No 439
>PRK06114 short chain dehydrogenase; Provisional
Probab=21.41 E-value=4.1e+02 Score=23.70 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=22.8
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
++++.|..++ .=+.+++.|.++|++|++.+.+.
T Consensus 10 ~~lVtG~s~g----IG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 10 VAFVTGAGSG----IGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred EEEEECCCch----HHHHHHHHHHHCCCEEEEEeCCc
Confidence 4556564332 12568889999999999998653
No 440
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=21.29 E-value=2.3e+02 Score=24.75 Aligned_cols=36 Identities=14% Similarity=0.064 Sum_probs=27.7
Q ss_pred CCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 162 GLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 162 G~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
|=+|...+.....++..|++.|++|+++|.--.|.+
T Consensus 7 gKGGvGKTt~~~nLA~~la~~G~rvLliD~D~q~~~ 42 (212)
T cd02117 7 GKGGIGKSTTSQNLSAALAEMGKKVLQVGCDPKADS 42 (212)
T ss_pred CCCcCcHHHHHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence 644555566667899999999999999998766643
No 441
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=21.23 E-value=4.5e+02 Score=22.35 Aligned_cols=51 Identities=12% Similarity=0.048 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHh
Q 013936 173 KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ 223 (433)
Q Consensus 173 ~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~ 223 (433)
...++.+..++|-|..+|+.-.-..+..---..+..|++.-..+++.+.+.
T Consensus 17 Sacv~~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~s 67 (236)
T KOG4022|consen 17 SACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSS 67 (236)
T ss_pred HHHHHHHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHh
Confidence 356788888999999999976443322111223456777777777766543
No 442
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=21.14 E-value=4e+02 Score=21.39 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=40.8
Q ss_pred CcEEEEECCCCCCChhHHHHHH--HHHHHhCCceEEEEeCCCCCCCCCCCCC-cccCCChHHHHHHHHHHHHhCCCCcEE
Q 013936 154 NPIVVVIPGLTSDSAAAYIKHL--AFKMAGHGWNVVVSNHRGLGGISLTSDC-FYNGGWTEDLRRVIDYLHCQYPEVPLY 230 (433)
Q Consensus 154 ~p~vvllHG~~g~s~~~y~~~~--~~~l~~~G~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~i~ 230 (433)
....+.-.|.+|.......... ..........++++.. | ..+..... .......+.+..+++.+++..++.+++
T Consensus 34 ~~~~~~n~~~~g~~~~~~~~~~~~~~~~~~~~~d~vil~~-G--~ND~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vv 110 (187)
T cd00229 34 PGVEVINLGVSGATTADALRRLGLRLALLKDKPDLVIIEL-G--TNDLGRGGDTSIDEFKANLEELLDALRERAPGAKVI 110 (187)
T ss_pred CCceEEeecccchhHHHHHhhcchhhhhccCCCCEEEEEe-c--ccccccccccCHHHHHHHHHHHHHHHHHHCCCCcEE
Confidence 3455666666655444433322 2344455688888866 2 22211110 111234467788888887766666666
Q ss_pred EEE
Q 013936 231 AVG 233 (433)
Q Consensus 231 lvG 233 (433)
+++
T Consensus 111 ~~~ 113 (187)
T cd00229 111 LIT 113 (187)
T ss_pred EEe
Confidence 665
No 443
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=21.13 E-value=2.3e+02 Score=25.69 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=29.9
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
|.+. |=+|...+.....++..|+++|++|+++|.=-.|++
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n~ 43 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKADS 43 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCCc
Confidence 4445 644555666677899999999999999998766553
No 444
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=21.07 E-value=39 Score=33.21 Aligned_cols=59 Identities=17% Similarity=0.307 Sum_probs=33.9
Q ss_pred ccceEEEeeCCCCcCCCCC-------CChh------------------HHhcCCCeEEEEcCCCCeeeeccCCcCCCCcH
Q 013936 350 SVPLLCISTLDDPVCTREA-------IPWD------------------ECRANEKIILATTRHGGHLAFYEGITAKSLWW 404 (433)
Q Consensus 350 ~~P~Lii~g~dD~ivp~~~-------~~~~------------------~~~~~~~~~l~~~~~gGH~~~~e~~~~~~~w~ 404 (433)
.+++|+.+|..|-+||.-. +.+. ..+...+..++.+.++||+...+. |. ..
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dq--P~--~a 405 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQ--PE--AA 405 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHS--HH--HH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhC--HH--HH
Confidence 4899999999999998421 1110 001235678999999999987762 22 34
Q ss_pred HHHHHHHH
Q 013936 405 VRAVNVFL 412 (433)
Q Consensus 405 ~~~v~~Fl 412 (433)
.+.+..|+
T Consensus 406 ~~m~~~fl 413 (415)
T PF00450_consen 406 LQMFRRFL 413 (415)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 45566665
No 445
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=21.01 E-value=1.3e+02 Score=27.73 Aligned_cols=33 Identities=9% Similarity=0.194 Sum_probs=25.2
Q ss_pred EEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEe
Q 013936 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (433)
Q Consensus 156 ~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d 190 (433)
.||++|-.. .....+..++..+.++||+++.++
T Consensus 232 ~IILmHd~~--~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTA--SSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCc--cHHHHHHHHHHHHHHCCCEEEeHH
Confidence 478999753 234456889999999999998764
No 446
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=20.95 E-value=1.4e+02 Score=26.34 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=24.2
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH 182 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~ 182 (433)
+....++++||++|+..+.....+++.+.+.
T Consensus 122 d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~ 152 (216)
T PF00091_consen 122 DSLDGFFIVHSLGGGTGSGLGPVLAEMLREE 152 (216)
T ss_dssp TTESEEEEEEESSSSHHHHHHHHHHHHHHHT
T ss_pred cccccceecccccceeccccccccchhhhcc
Confidence 3456799999999987777767777777776
No 447
>cd02038 FleN-like FleN is a member of the Fer4_NifH superfamily. It shares the common function as an ATPase, with the ATP-binding domain at the N-terminus. In Pseudomonas aeruginosa, FleN gene is involved in regulating the number of flagella and chemotactic motility by influencing FleQ activity.
Probab=20.94 E-value=2.7e+02 Score=22.44 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=28.3
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~ 196 (433)
|.+..+-+|...+..-..++..++++|.+|+++|.-..|.
T Consensus 2 i~~~~~kgg~gkt~~~~~~a~~~~~~~~~~~~vd~D~~~~ 41 (139)
T cd02038 2 IAVTSGKGGVGKTNISANLALALAKLGKRVLLLDADLGLA 41 (139)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 4455555555555556678888889999999999875443
No 448
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=20.90 E-value=1.8e+02 Score=26.21 Aligned_cols=27 Identities=19% Similarity=0.256 Sum_probs=23.4
Q ss_pred HHHHHHHHhCCceEEEEeCCCCCCCCC
Q 013936 173 KHLAFKMAGHGWNVVVSNHRGLGGISL 199 (433)
Q Consensus 173 ~~~~~~l~~~G~~vv~~d~rG~G~s~~ 199 (433)
..+++.|.+.|.+|+++|.-|.|.++.
T Consensus 60 ~amve~L~~~GvdV~ifddtg~~~TPD 86 (318)
T COG4874 60 NAMVEGLRQAGVDVVIFDDTGQGETPD 86 (318)
T ss_pred HHHHHHHHhcCceEEEeecCCCCCCCc
Confidence 567888999999999999999988753
No 449
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=20.87 E-value=4.3e+02 Score=23.40 Aligned_cols=63 Identities=13% Similarity=0.030 Sum_probs=35.9
Q ss_pred EEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcc--cCCChHHHHHHHHHHHHhCC
Q 013936 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFY--NGGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 158 vllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~ 225 (433)
+++-|-++.- -..+++.|.++|++|++.+........ .....+ .....+++.++++.+.++++
T Consensus 11 vlItGas~~i----G~~la~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK08220 11 VWVTGAAQGI----GYAVALAFVEAGAKVIGFDQAFLTQED-YPFATFVLDVSDAAAVAQVCQRLLAETG 75 (252)
T ss_pred EEEeCCCchH----HHHHHHHHHHCCCEEEEEecchhhhcC-CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5555643321 246788899999999999875411100 001111 12234677788887777664
No 450
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=20.87 E-value=6.1e+02 Score=24.33 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=26.1
Q ss_pred CCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCC
Q 013936 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (433)
Q Consensus 165 g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~ 198 (433)
|+.....+..+++.|.++|++|-++ -||+|+..
T Consensus 59 GtGKTP~vi~la~~l~~rG~~~gvv-SRGYgg~~ 91 (336)
T COG1663 59 GTGKTPVVIWLAEALQARGVRVGVV-SRGYGGKL 91 (336)
T ss_pred CCCcCHHHHHHHHHHHhcCCeeEEE-ecCcCCCC
Confidence 3345677788999999999988777 69999843
No 451
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=20.86 E-value=1.7e+02 Score=22.10 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=23.5
Q ss_pred CCCcEEEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCC
Q 013936 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (433)
Q Consensus 152 ~~~p~vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG 193 (433)
..+++||+|... . ++ ...+..|.+.||..+ .++.|
T Consensus 60 ~~~~ivv~C~~G--~-rS---~~aa~~L~~~G~~~~-~~l~g 94 (110)
T COG0607 60 DDDPIVVYCASG--V-RS---AAAAAALKLAGFTNV-YNLDG 94 (110)
T ss_pred CCCeEEEEeCCC--C-Ch---HHHHHHHHHcCCccc-cccCC
Confidence 467888888873 2 22 235678888999888 44443
No 452
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=20.82 E-value=1.7e+02 Score=29.10 Aligned_cols=100 Identities=21% Similarity=0.277 Sum_probs=63.7
Q ss_pred EEEEECCCCCC--ChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCc-ccCCChHHHHHHHHHHHHhCCCCcEEEE
Q 013936 156 IVVVIPGLTSD--SAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCF-YNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (433)
Q Consensus 156 ~vvllHG~~g~--s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~i~lv 232 (433)
-||++||.+-- ....-++.+++.|.++|.+|-.--||=-|+-++.-.-. -..+-.-|...-+|.+...+++..+.+|
T Consensus 308 ~ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~eMdeIN~~F~~tDvalV 387 (462)
T PRK09444 308 SVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLV 387 (462)
T ss_pred cEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCcceeEEeecCCCHHHHHhHHhhccccccCCEEEE
Confidence 48999998421 11233577888899999999888888777765432211 1122334655566778888887777777
Q ss_pred EechhHHHHHHHHhhcCCCCCceEEE
Q 013936 233 GTSIGANILVKYLGENGVNTPLVGAA 258 (433)
Q Consensus 233 G~S~GG~ia~~~a~~~~~~~~v~~~v 258 (433)
.|++=..+=+++...+++|.|+=
T Consensus 388 ---IGANDvVNPaA~~dp~SpIyGMP 410 (462)
T PRK09444 388 ---IGANDTVNPAAQEDPNSPIAGMP 410 (462)
T ss_pred ---ecCccCCCcccccCCCCCcCCCc
Confidence 57777777666654334565543
No 453
>PRK14974 cell division protein FtsY; Provisional
Probab=20.80 E-value=7.5e+02 Score=23.71 Aligned_cols=75 Identities=16% Similarity=0.217 Sum_probs=40.9
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEechhHHHHHHHHhhcCCCCC
Q 013936 174 HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTP 253 (433)
Q Consensus 174 ~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~GG~ia~~~a~~~~~~~~ 253 (433)
..++....+|+.++.+|-.|....+. ...+++..+.+ ...|. .+++|.-+.-|.-+..-+..+.....
T Consensus 213 ~ai~~~~~~~~DvVLIDTaGr~~~~~--------~lm~eL~~i~~---~~~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~ 280 (336)
T PRK14974 213 DAIEHAKARGIDVVLIDTAGRMHTDA--------NLMDELKKIVR---VTKPD-LVIFVGDALAGNDAVEQAREFNEAVG 280 (336)
T ss_pred HHHHHHHhCCCCEEEEECCCccCCcH--------HHHHHHHHHHH---hhCCc-eEEEeeccccchhHHHHHHHHHhcCC
Confidence 34455556789999999998654221 11233333322 22343 35566666666666655554433235
Q ss_pred ceEEEEE
Q 013936 254 LVGAAAI 260 (433)
Q Consensus 254 v~~~v~i 260 (433)
+.++|+-
T Consensus 281 ~~giIlT 287 (336)
T PRK14974 281 IDGVILT 287 (336)
T ss_pred CCEEEEe
Confidence 7777753
No 454
>PRK06398 aldose dehydrogenase; Validated
Probab=20.76 E-value=4.9e+02 Score=23.33 Aligned_cols=62 Identities=18% Similarity=0.238 Sum_probs=36.7
Q ss_pred EEEECCCCCCChhHHHHHHHHHHHhCCceEEEEeCCCCCCCCCCCCCcc--cCCChHHHHHHHHHHHHhCC
Q 013936 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFY--NGGWTEDLRRVIDYLHCQYP 225 (433)
Q Consensus 157 vvllHG~~g~s~~~y~~~~~~~l~~~G~~vv~~d~rG~G~s~~~~~~~~--~~~~~~Dl~~~i~~l~~~~~ 225 (433)
.+++-|-.++ .=+.++..|.++|++|++.+...-... .-... .....+++.++++.+.++++
T Consensus 8 ~vlItGas~g----IG~~ia~~l~~~G~~Vi~~~r~~~~~~---~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 8 VAIVTGGSQG----IGKAVVNRLKEEGSNVINFDIKEPSYN---DVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred EEEEECCCch----HHHHHHHHHHHCCCeEEEEeCCccccC---ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4566664322 125688899999999999875432110 01111 12334678888888877654
No 455
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=20.75 E-value=5.7e+02 Score=22.30 Aligned_cols=73 Identities=12% Similarity=0.034 Sum_probs=44.6
Q ss_pred HHHHHHhCCc-eEEEEeCCCCCCCCCCCCCcccCCChHHHHHHHHHHHHhCCCCcEEEEEech----hHHHHHHHHhhcC
Q 013936 175 LAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSI----GANILVKYLGENG 249 (433)
Q Consensus 175 ~~~~l~~~G~-~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~i~lvG~S~----GG~ia~~~a~~~~ 249 (433)
....+...|. +|+..+..+.... ..+....++..+.++.. ..++++|+|. |..++-..+++-+
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~~-----------~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAGA-----------DTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccCC-----------ChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 3344555676 6887777654321 12444555544433322 3599999998 8889988888876
Q ss_pred CCCCceEEEEE
Q 013936 250 VNTPLVGAAAI 260 (433)
Q Consensus 250 ~~~~v~~~v~i 260 (433)
-. .+..++.+
T Consensus 136 a~-lvsdv~~l 145 (202)
T cd01714 136 WP-QITYVSKI 145 (202)
T ss_pred CC-ccceEEEE
Confidence 53 45555555
No 456
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=20.59 E-value=1.5e+02 Score=27.52 Aligned_cols=25 Identities=24% Similarity=0.231 Sum_probs=19.2
Q ss_pred hCCCCcEEEEEechhHHHHHHHHhh
Q 013936 223 QYPEVPLYAVGTSIGANILVKYLGE 247 (433)
Q Consensus 223 ~~~~~~i~lvG~S~GG~ia~~~a~~ 247 (433)
..+-.|-.++|||+|-..|+..++.
T Consensus 78 ~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 78 SWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HcCCcccEEEecCHHHHHHHHHhCC
Confidence 4455678999999999998765543
No 457
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=20.58 E-value=22 Score=14.96 Aligned_cols=6 Identities=50% Similarity=0.916 Sum_probs=2.7
Q ss_pred EechhH
Q 013936 233 GTSIGA 238 (433)
Q Consensus 233 G~S~GG 238 (433)
|+++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 345544
No 458
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=20.50 E-value=4.8e+02 Score=21.29 Aligned_cols=24 Identities=17% Similarity=0.206 Sum_probs=16.8
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCC
Q 013936 174 HLAFKMAGHGWNVVVSNHRGLGGI 197 (433)
Q Consensus 174 ~~~~~l~~~G~~vv~~d~rG~G~s 197 (433)
.+.+.+.++|..+++++..-+|.+
T Consensus 46 ~l~~~~~~~~~~v~~i~~~~~~~~ 69 (153)
T TIGR02540 46 ELHRELGPSHFNVLAFPCNQFGES 69 (153)
T ss_pred HHHHHHhhCCeEEEEEeccccccC
Confidence 455556667999999987555544
No 459
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=20.41 E-value=1.3e+02 Score=28.60 Aligned_cols=27 Identities=26% Similarity=0.257 Sum_probs=20.2
Q ss_pred HHHhC-CCCcEEEEEechhHHHHHHHHh
Q 013936 220 LHCQY-PEVPLYAVGTSIGANILVKYLG 246 (433)
Q Consensus 220 l~~~~-~~~~i~lvG~S~GG~ia~~~a~ 246 (433)
+.++. +..+.++.|||+|=..|+..++
T Consensus 77 l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 77 LAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 33434 5678899999999999885554
No 460
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.33 E-value=1.4e+02 Score=28.15 Aligned_cols=25 Identities=24% Similarity=0.082 Sum_probs=20.4
Q ss_pred CCcEEEEEechhHHHHHHHHhhcCC
Q 013936 226 EVPLYAVGTSIGANILVKYLGENGV 250 (433)
Q Consensus 226 ~~~i~lvG~S~GG~ia~~~a~~~~~ 250 (433)
-.+-++.|.|+|+.++..||.....
T Consensus 38 i~~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 38 IPIDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred CCccEEEecCHHHHHHHHHHcCCCh
Confidence 4467999999999999999886543
No 461
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.27 E-value=1.6e+02 Score=27.41 Aligned_cols=20 Identities=25% Similarity=0.081 Sum_probs=17.0
Q ss_pred EEEEEechhHHHHHHHHhhc
Q 013936 229 LYAVGTSIGANILVKYLGEN 248 (433)
Q Consensus 229 i~lvG~S~GG~ia~~~a~~~ 248 (433)
=.++|.|.||.+++.++...
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 48999999999999887543
Done!