Query 013937
Match_columns 433
No_of_seqs 311 out of 2124
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 08:53:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013937.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013937hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1397 Ca2+/H+ antiporter VCX 100.0 2E-89 4.4E-94 666.7 32.6 406 23-431 28-441 (441)
2 TIGR00378 cax calcium/proton e 100.0 1.3E-67 2.8E-72 531.5 33.9 348 74-424 1-349 (349)
3 TIGR00846 caca2 calcium/proton 100.0 2.5E-64 5.5E-69 509.9 38.0 360 60-424 5-365 (365)
4 COG0387 ChaA Ca2+/H+ antiporte 100.0 3.1E-62 6.7E-67 480.7 37.5 360 62-427 6-368 (368)
5 PRK10599 calcium/sodium:proton 100.0 1.1E-48 2.3E-53 390.0 32.8 319 94-424 42-365 (366)
6 PRK10734 putative calcium/sodi 100.0 8.1E-46 1.8E-50 369.3 30.1 310 93-428 6-321 (325)
7 TIGR00367 K+-dependent Na+/Ca+ 100.0 5E-42 1.1E-46 340.5 32.9 299 93-419 5-307 (307)
8 COG0530 ECM27 Ca2+/Na+ antipor 100.0 2.1E-41 4.6E-46 335.7 30.9 303 91-425 11-319 (320)
9 KOG1307 K+-dependent Ca2+/Na+ 100.0 1.1E-32 2.4E-37 273.8 18.3 316 93-427 64-578 (588)
10 TIGR00927 2A1904 K+-dependent 100.0 8.8E-32 1.9E-36 287.6 23.3 145 282-426 935-1085(1096)
11 PLN03151 cation/calcium exchan 99.9 1E-24 2.2E-29 233.3 34.2 316 92-425 146-638 (650)
12 PRK10734 putative calcium/sodi 99.8 3.2E-19 6.9E-24 178.3 16.9 140 281-425 4-145 (325)
13 KOG2399 K+-dependent Na+:Ca2+ 99.8 2.3E-18 5E-23 181.9 19.8 312 92-423 110-597 (605)
14 TIGR00367 K+-dependent Na+/Ca+ 99.8 3E-18 6.5E-23 170.4 16.0 140 282-426 4-145 (307)
15 PF01699 Na_Ca_ex: Sodium/calc 99.7 8.8E-18 1.9E-22 147.3 11.4 132 291-422 2-139 (140)
16 TIGR00927 2A1904 K+-dependent 99.7 1.8E-17 4E-22 178.5 13.2 136 289-427 469-606 (1096)
17 COG0530 ECM27 Ca2+/Na+ antipor 99.7 6.5E-17 1.4E-21 160.9 15.7 149 277-428 7-155 (320)
18 TIGR00845 caca sodium/calcium 99.6 3.7E-15 7.9E-20 163.1 14.0 177 65-247 734-917 (928)
19 KOG1307 K+-dependent Ca2+/Na+ 99.6 3E-16 6.6E-21 157.1 4.7 189 49-249 384-576 (588)
20 PLN03151 cation/calcium exchan 99.6 4.3E-14 9.4E-19 151.9 15.3 132 291-424 154-288 (650)
21 TIGR00845 caca sodium/calcium 99.5 4.5E-14 9.7E-19 154.7 13.7 144 279-422 753-916 (928)
22 PF01699 Na_Ca_ex: Sodium/calc 99.5 3.3E-14 7.2E-19 124.6 7.4 136 100-246 1-139 (140)
23 TIGR00846 caca2 calcium/proton 99.5 8.4E-13 1.8E-17 134.3 15.2 138 284-425 39-190 (365)
24 TIGR00378 cax calcium/proton e 99.5 9.3E-13 2E-17 133.3 15.1 140 282-424 19-172 (349)
25 KOG1306 Ca2+/Na+ exchanger NCX 99.2 8.9E-12 1.9E-16 126.2 2.6 179 64-248 405-589 (596)
26 PRK10599 calcium/sodium:proton 98.5 8.7E-07 1.9E-11 89.6 13.0 136 95-247 227-364 (366)
27 KOG2399 K+-dependent Na+:Ca2+ 98.2 2.9E-05 6.4E-10 83.2 15.5 163 74-248 420-599 (605)
28 COG0387 ChaA Ca2+/H+ antiporte 98.1 3.8E-05 8.2E-10 77.1 13.1 138 92-246 223-363 (368)
29 KOG1306 Ca2+/Na+ exchanger NCX 98.1 2.4E-06 5.2E-11 87.4 3.9 140 283-422 429-587 (596)
30 KOG1397 Ca2+/H+ antiporter VCX 97.2 0.0083 1.8E-07 60.5 14.2 138 284-426 98-256 (441)
31 PRK10929 putative mechanosensi 77.9 1.5E+02 0.0034 35.0 22.7 69 339-413 863-931 (1109)
32 PF03547 Mem_trans: Membrane t 55.8 28 0.00061 35.3 6.4 25 66-90 238-262 (385)
33 COG1288 Predicted membrane pro 48.3 3.6E+02 0.0078 28.6 12.7 57 363-428 338-395 (481)
34 PF05915 DUF872: Eukaryotic pr 47.3 93 0.002 26.5 7.1 21 91-111 76-96 (115)
35 PF03348 Serinc: Serine incorp 45.9 3.8E+02 0.0083 28.2 14.3 25 226-250 283-307 (429)
36 PF03616 Glt_symporter: Sodium 45.9 1.9E+02 0.004 29.7 10.5 57 295-359 232-288 (368)
37 PF11683 DUF3278: Protein of u 40.3 72 0.0016 27.5 5.6 9 241-249 79-87 (129)
38 KOG3599 Ca2+-modulated nonsele 35.3 7.3E+02 0.016 28.4 16.3 114 308-422 532-665 (798)
39 PTZ00206 amino acid transporte 31.5 3.9E+02 0.0085 28.2 10.5 21 67-87 63-83 (467)
40 PF03606 DcuC: C4-dicarboxylat 30.3 1.6E+02 0.0035 31.1 7.4 28 94-121 85-112 (465)
41 PF01970 TctA: Tripartite tric 29.4 2.7E+02 0.0059 29.1 8.7 79 334-415 79-157 (419)
42 PF09788 Tmemb_55A: Transmembr 29.0 92 0.002 30.2 4.7 51 275-325 192-242 (256)
43 PF05661 DUF808: Protein of un 28.1 2.1E+02 0.0044 28.4 6.9 76 40-121 36-111 (295)
44 PF12270 Cyt_c_ox_IV: Cytochro 27.7 4.3E+02 0.0092 23.3 11.0 28 224-251 35-62 (137)
45 PRK10062 hypothetical protein; 27.3 2E+02 0.0043 28.6 6.7 76 40-121 36-111 (303)
46 PF06963 FPN1: Ferroportin1 (F 26.8 7.6E+02 0.017 25.9 16.8 69 304-376 282-351 (432)
47 COG0385 Predicted Na+-dependen 25.7 7E+02 0.015 25.2 11.7 59 313-377 96-156 (319)
48 PRK11588 hypothetical protein; 25.5 8.7E+02 0.019 26.2 12.2 45 77-121 95-144 (506)
49 PF02554 CstA: Carbon starvati 23.3 8.4E+02 0.018 25.2 16.9 20 402-421 238-257 (376)
50 PF03605 DcuA_DcuB: Anaerobic 22.2 54 0.0012 33.5 1.9 32 148-179 279-310 (364)
51 PF05684 DUF819: Protein of un 22.1 3.9E+02 0.0084 27.6 8.2 52 280-331 206-258 (378)
52 TIGR00939 2a57 Equilibrative N 21.0 1.6E+02 0.0035 30.9 5.2 19 94-112 307-325 (437)
53 KOG1304 Amino acid transporter 20.5 3.4E+02 0.0074 28.8 7.4 31 92-123 82-112 (449)
No 1
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-89 Score=666.68 Aligned_cols=406 Identities=57% Similarity=0.910 Sum_probs=377.0
Q ss_pred CccccccccCCCcccCCCCCccccccccccccccccchhhHHHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHH
Q 013937 23 TPVMRKVHAFDSETTHAYPHADMANSRVFKQIRMGPLSSIHTVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGI 102 (433)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~i 102 (433)
.+.+|..|+++++..||++|....+..+.+..+ ....++|++++++++|.+|+|+|+++.+||..|++.|+|.+|+++|
T Consensus 28 l~~~~s~~~~~~s~~~~k~~l~~~~~~~w~~~k-~~~~~l~~Vll~~~l~~lf~f~pl~~~~h~~~~s~~~vF~lsll~i 106 (441)
T KOG1397|consen 28 LRAGRSAHNMASSLLEKKSLLSLIKHAPWKYLK-NVLTNLQEVLLSTKLNLLFPFVPLAIIAHWFTWSKGWVFLLSLLGI 106 (441)
T ss_pred hhccccccchhHHHHhhccchhhhhhhhhHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccchHHHHHHHhhh
Confidence 446788888888888999977777777666666 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCchhhHHHHhhcchhhHHHHHHHhccCCceeeeecchhHHHHHHHHHHHHHHhhcceeecc
Q 013937 103 TPLAERLGFATEQLAFYTGPTVGGLLNATFGNATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHK 182 (433)
Q Consensus 103 i~la~~l~~~~e~la~~~g~~vgGll~a~~gn~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~ 182 (433)
+|+|+++++++||++.++|+++||++||+|||+.|+|++++|+++|+.++||++++||+++|+||++|+|+++||++ |
T Consensus 107 iPLA~~l~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~s~~~Ggi~--r 184 (441)
T KOG1397|consen 107 IPLAERLGFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGLSLFCGGIR--R 184 (441)
T ss_pred hhHHHHHHHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhHHHhhcccc--c
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996 8
Q ss_pred ceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhcccc-c---cCcccccchHHHHHHHHHHHHHHHHHHHHhhh--cccC
Q 013937 183 KVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEV-H---FGKSELALSRFSSCVMLIAYASYLFFQLKSQV--NLYN 256 (433)
Q Consensus 183 ~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~-~---~~~~~~~lS~~~siiLl~~Y~~yl~f~l~~h~--~~~~ 256 (433)
|+|+||++.+++++.+++++++++++|++++++.+.. + .++..+.+||..|++|++.|++|++||+|||| ..+.
T Consensus 185 k~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~h~~~~~ 264 (441)
T KOG1397|consen 185 KDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTARHIWQFP 264 (441)
T ss_pred ceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhcccccCCCC
Confidence 9999999999999999999999999999999988733 2 23457899999999999999999999999966 4454
Q ss_pred CCCcCC--CCCCCCCcccCccchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHH
Q 013937 257 PFDEER--GDGGDSDEEEAPELTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSA 334 (433)
Q Consensus 257 ~~~e~~--~~~~~~~~~~~~~~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~a 334 (433)
.++||+ ++++..++||.|++++|+++.|+++.|++++++|+++|+++|+.++++|+|+.|+|+|++|+++|++||++|
T Consensus 265 ~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~A 344 (441)
T KOG1397|consen 265 TPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGA 344 (441)
T ss_pred CCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcc
Confidence 444333 223333367889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHH
Q 013937 335 IMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFETASLFIAVLVVAFMLQEGTSNYFKGLMLIL 414 (433)
Q Consensus 335 i~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~ 414 (433)
+.+|.|||+|+++|.++||++|+++|++|+.++++|.+|++|+++|+.+|+.++++++++++++++||++||++|.+|++
T Consensus 345 I~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~isVfl~~y~lqdG~Sny~kG~mLll 424 (441)
T KOG1397|consen 345 ISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFISVFLVAYLLQDGKSNYFKGLMLLL 424 (441)
T ss_pred eeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCC
Q 013937 415 GYLIVAASFYVHVDLSN 431 (433)
Q Consensus 415 ~Y~i~~~~~~~~~~~~~ 431 (433)
+|++++++||++++|++
T Consensus 425 ~Y~Iia~~Ff~~~~~~~ 441 (441)
T KOG1397|consen 425 CYLIIAAGFFVYNDPSQ 441 (441)
T ss_pred HHHHHHHHhhccCCCCC
Confidence 99999999999999974
No 2
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=1.3e-67 Score=531.55 Aligned_cols=348 Identities=44% Similarity=0.712 Sum_probs=311.4
Q ss_pred HHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHhhcchhhHHHHHHHhccCCceee
Q 013937 74 LLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFYTGPTVGGLLNATFGNATEMIISIYALNNGMIRVV 153 (433)
Q Consensus 74 ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~~g~~vgGll~a~~gn~pELiisi~Al~~g~~~i~ 153 (433)
|++|||+++++++.+|++.++|++|+++++|+++++++++|++|+++|+.+||++++++||+||+++++.|+.+|+++++
T Consensus 1 ~l~~vp~~~~~~~~~~~~~~~F~~~~~aiipla~~l~~~~~~lA~~~g~~vggl~~~~~gt~pEL~vsi~A~~~g~~~i~ 80 (349)
T TIGR00378 1 LLVFVPLSLIWGHFQWSHTLTFLFNFLAIIPLAAIMGNATEELADKAGPTIGGLLNATFGNAVELIVSIIALKEGLVRIV 80 (349)
T ss_pred CceeeeHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHhhccHHHHHHHHHHHHcCChhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecchhHHHHHHHHHHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHH
Q 013937 154 QQSLLGSILSNMLLVLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSS 233 (433)
Q Consensus 154 ~gsilGS~l~nllLvlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~s 233 (433)
+||++|||++|+++++|+|+++||++ +++|.+|++.++.+..+++++++.+++|+.++.+..+.. +.....+||++|
T Consensus 81 ~gnivGS~i~NllLilGls~liggl~--~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~-~~~~~~ls~~~a 157 (349)
T TIGR00378 81 QASLTGSLLGNLLLVLGLCFFFGGLN--YKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKE-DGKILNLSRGTS 157 (349)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhccc--cceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCcc-chHHHHHHHHHH
Confidence 99999999999999999999999996 478999999888888888888999999977643211110 112346999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCcCCCCCCCC-CcccCccchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCC
Q 013937 234 CVMLIAYASYLFFQLKSQVNLYNPFDEERGDGGDS-DEEEAPELTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNM 312 (433)
Q Consensus 234 iiLl~~Y~~yl~f~l~~h~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gi 312 (433)
++++++|++|++||+|+||+.|+++++++++++++ +++++++++.++.+.+++++++++.++|++++++++.+++.+|+
T Consensus 158 iill~lY~~~L~~~l~~h~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~v~i~~~a~~lv~~~~~~~~~~gi 237 (349)
T TIGR00378 158 IVIIIVYVLFLYFQLGTHHALYEQQEAETDEVMETIERNPHHSLSVKSSTVVLLGTTVIVAFCSEFLVGTIDNVVESTGL 237 (349)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhCCcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999886532221111111 11122336677888899999999999999999999999999999
Q ss_pred CcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHHHHHHHHH
Q 013937 313 PVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFETASLFIAV 392 (433)
Q Consensus 313 s~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~~~l~~sv 392 (433)
|+.|+|++++|++||+||+++++.+|+|||.|+++||++|||+|+.++++|++++++|++|+|+++.|+.+|..++++++
T Consensus 238 ~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lvl~~~~~~~~~~L~f~~~~~~~l~~~v 317 (349)
T TIGR00378 238 SKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLVIVGWMIDVPMTLNFSTFELVALFIAV 317 (349)
T ss_pred CHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHhCCCceecCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCccchHHHHHHHHHHHHHHHHHh
Q 013937 393 LVVAFMLQEGTSNYFKGLMLILGYLIVAASFY 424 (433)
Q Consensus 393 l~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~ 424 (433)
+++.++.+|||+||+||.+++++|++++++||
T Consensus 318 ~~~~~~~~dg~~n~leG~~ll~~Y~i~~~~f~ 349 (349)
T TIGR00378 318 LLSNYISLDGESNWLEGVMLLAMYIIIAMAFF 349 (349)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999886
No 3
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00 E-value=2.5e-64 Score=509.89 Aligned_cols=360 Identities=49% Similarity=0.807 Sum_probs=317.7
Q ss_pred hhhHHHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHhhcchhhHH
Q 013937 60 SSIHTVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFYTGPTVGGLLNATFGNATEMI 139 (433)
Q Consensus 60 ~~~~~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~~g~~vgGll~a~~gn~pELi 139 (433)
+..|++++++|+|++++|||+++++++.+|++.++|++++++++|+++++++++|++|+++|.++||+++++.+|+||++
T Consensus 5 ~~~~~~~~~~~~~~ll~fvp~~~~~~~~~~~~~~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~vG~ll~a~~ts~pEL~ 84 (365)
T TIGR00846 5 SVLQEVILGSWLNILLIFVPAAIILGLWGWSQTVIFLLNLLGIIPLAERVSFATEQLAHRLGPTLGGLLNATFGNAVELI 84 (365)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHHHhHHHHHH
Confidence 44789999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHhccCCceeeeecchhHHHHHHHHHHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013937 140 ISIYALNNGMIRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEV 219 (433)
Q Consensus 140 isi~Al~~g~~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~ 219 (433)
+++.|+.+|++++++||++|||++|+++++|+|++++|++.+ ++|.++++..+....+++++++.+++|..++.+...
T Consensus 85 vsi~A~~~g~~~la~gnivGS~i~NilLIlGl~~l~~~~~~~-~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~- 162 (365)
T TIGR00846 85 ISLMALGEGKVEVVRASLLGSILSNLLLVLGLSLFLGGIKNI-REQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPG- 162 (365)
T ss_pred HHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-ceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCC-
Confidence 999999999999999999999999999999999999998642 367788877666667777888888889775433211
Q ss_pred ccCcccccchHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcCCCCCCCCCcccCc-cchhHHHHHHHHHHHHHHHHHHHH
Q 013937 220 HFGKSELALSRFSSCVMLIAYASYLFFQLKSQVNLYNPFDEERGDGGDSDEEEAP-ELTQWEAIAWLAILTIWVSLLSGY 298 (433)
Q Consensus 220 ~~~~~~~~lS~~~siiLl~~Y~~yl~f~l~~h~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~~i~~~a~~ 298 (433)
.+....+||++|++++++|++|++||+|+||+.|++++++++ ++++++++++ +.+.++++.+++++++++..+|++
T Consensus 163 --~~~~~~ls~~~giill~ly~~yl~~~~~~~~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~~l~~~a~~ 239 (365)
T TIGR00846 163 --QDSILGLSRGIAIVMLILYGAFLVFQLVTHRQLFEPQEEADS-DYDDEVHEEPTVISPWSAAAWLVGATIVVALLAEY 239 (365)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHHHHHhccchhcccccccccc-ccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 112246999999999999999999999999987754322111 1111222223 366788999999999999999999
Q ss_pred HHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccc
Q 013937 299 LVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDL 378 (433)
Q Consensus 299 lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l 378 (433)
+|++++.+++.+|+|+.|+|++++|++||+||+++++.+|+||+.|+++||++|||+||+++++|++++++|..++|+++
T Consensus 240 lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~li~~~~~~~~~l 319 (365)
T TIGR00846 240 LVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVVLVAWMLGIPMDL 319 (365)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHh
Q 013937 379 NFQLFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFY 424 (433)
Q Consensus 379 ~~~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~ 424 (433)
.++.++..+++++++++.+...|||.+|+||.+|+++|++|+..+|
T Consensus 320 ~~~~~~~~~l~~s~~~~~~~~~~~~~~~~eG~~ll~~Y~~~~~~~~ 365 (365)
T TIGR00846 320 NFGAPETVALALSVFLTTITLQDGRSNYLEGAVLLALYIIIAMLFF 365 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHHHhC
Confidence 9999998888888888888889999999999999999999998876
No 4
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-62 Score=480.66 Aligned_cols=360 Identities=32% Similarity=0.536 Sum_probs=332.5
Q ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHhhcchhhHHHH
Q 013937 62 IHTVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFYTGPTVGGLLNATFGNATEMIIS 141 (433)
Q Consensus 62 ~~~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~~g~~vgGll~a~~gn~pELiis 141 (433)
..+....++++.++.|+|++...++..|++.++|+.++++|+|+|.++++++|++|++.||++||++|+++||+.|+++.
T Consensus 6 ~~~~~~~~~~~~l~afv~~~l~~~~~~~~~~~~fi~~~l~i~plA~~v~~aaE~lA~~vG~~~G~Lina~f~~~iEvil~ 85 (368)
T COG0387 6 KLRRLRTSLILPLLAFVPLVLIWGIFQTGPVVIFIAALLAIIPLAFSVVRAAEVLAARVGEPYGSLINALFGNAIEVILI 85 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 34456678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCceeeeecchhHHHHHHHHHHHHHHhhcceeeccceEEEcccchHHHHHHHHHH-HHHHHHHHHhhhhccccc
Q 013937 142 IYALNNGMIRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMA-VMGIMFPAVLHFTRTEVH 220 (433)
Q Consensus 142 i~Al~~g~~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla-~~~lllp~~~~~~~~~~~ 220 (433)
..++++|++.++++++.||++.|+++++|+|++.||+| |++|.||.+.++.++.++..+ ++++++|+++.++.+
T Consensus 86 ~~al~~G~~~lvr~Si~gsIm~~~llv~GlslllGglr--~~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~--- 160 (368)
T COG0387 86 VAALKSGSPTLVRDSLYGSIMINLLLVVGLSLLLGGLR--HKTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGG--- 160 (368)
T ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHcchh--hceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCC---
Confidence 99999999999999999999999999999999999995 689999999999988777776 789999988765432
Q ss_pred cCcccccchHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcCC--CCCCCCCcccCccchhHHHHHHHHHHHHHHHHHHHH
Q 013937 221 FGKSELALSRFSSCVMLIAYASYLFFQLKSQVNLYNPFDEER--GDGGDSDEEEAPELTQWEAIAWLAILTIWVSLLSGY 298 (433)
Q Consensus 221 ~~~~~~~lS~~~siiLl~~Y~~yl~f~l~~h~~~~~~~~e~~--~~~~~~~~~~~~~~~~~~~i~~l~~~~~~i~~~a~~ 298 (433)
+......|+..+++++++|+.+++||+|||++.|.+.++++ .+|++...+++++|+.++...+|+++++.++++||+
T Consensus 161 -~~~~~~~s~~~avv~i~~Y~lfL~fql~tH~~~f~~~~~~e~~~ee~~~h~~~~~~~s~~~s~~vLl~~tv~v~~lae~ 239 (368)
T COG0387 161 -GNFSLGQSLFVAVVLIALYGLFLFFQLKTHASLFWQVHEAEGEAEEDDPHHDDPSKWSVLLSTGVLLIATVLVALLAEI 239 (368)
T ss_pred -CcchHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 22347889999999999999999999999999998765443 222233345667899999999999999999999999
Q ss_pred HHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccc
Q 013937 299 LVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDL 378 (433)
Q Consensus 299 lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l 378 (433)
++.++|...+++|.|+.|+|+++.|+++|+||+++|+.+|+|||+|.+++.++||.+|.++|.+|..++++|+.|+||++
T Consensus 240 lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~lltiP~lvlis~~~gqpm~l 319 (368)
T COG0387 240 LVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLTIPVLVLISLFTGQPLTL 319 (368)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHhhcc
Q 013937 379 NFQLFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFYVHV 427 (433)
Q Consensus 379 ~~~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~ 427 (433)
.+.+.|+++++.++++.++...|||+||+||.+++++|.+|+..+|++|
T Consensus 320 ~~~~~elV~l~~~v~~~~~~~sdG~sn~leG~~lL~lya~~~~~ff~~~ 368 (368)
T COG0387 320 GFGPPELVLLVVTVFLANILFSDGRTNWLEGVVLLALYAIYAMLFFFPP 368 (368)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999876
No 5
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=1.1e-48 Score=389.98 Aligned_cols=319 Identities=17% Similarity=0.260 Sum_probs=270.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHhhcchhh--HHHHHHHhccCCceeeeecchhHHHHHHHHHHHH
Q 013937 94 VFFFSLLGITPLAERLGFATEQLAFYTGPTVGGLLNATFGNATE--MIISIYALNNGMIRVVQQSLLGSILSNMLLVLGC 171 (433)
Q Consensus 94 iF~~~~l~ii~la~~l~~~~e~la~~~g~~vgGll~a~~gn~pE--Liisi~Al~~g~~~i~~gsilGS~l~nllLvlG~ 171 (433)
++..-+.+++..+....+.+|.+|+|+||.+|.++++-.-...| +|++++..-.+++.++..++.-.....+--++|+
T Consensus 42 ~~~~~~~~i~~~~~~~v~hAe~lA~~~GeP~GtliLtlsv~~iEv~li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl 121 (366)
T PRK10599 42 INLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGF 121 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHH
Confidence 34444455666889999999999999999999998776668999 4445554456779999999999988888789999
Q ss_pred HHhhcceeeccceEEEcccch-HHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHHh
Q 013937 172 SFFIGGIIHHKKVQVFNKASA-VVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQLKS 250 (433)
Q Consensus 172 ~~l~gg~~~~~~~~~~~~~~a-~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~l~~ 250 (433)
|+++||+| +++|+||.+.+ +.++.++.++++++++|.++.. +......++..+++++++|+.|++||++|
T Consensus 122 ~ll~GGlr--~~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~-------~~~s~~~s~~~avv~lvlY~~fL~fQl~t 192 (366)
T PRK10599 122 SLLLGGRK--FATQYMNLFGIKQYLIALFPLAIIVLVFPMALPG-------ANFSTGQALLVALISAAMYGVFLLIQTKT 192 (366)
T ss_pred HHHHhccc--cCeeecCHHhHHHHHHHHHHHHHHHHhcCcccCC-------CccchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999996 58999999866 6778999999999999987521 11234578999999999999999999999
Q ss_pred hhcccCCCCcCCCCCCCCCcccCcc--chhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhch
Q 013937 251 QVNLYNPFDEERGDGGDSDEEEAPE--LTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNA 328 (433)
Q Consensus 251 h~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~ 328 (433)
||++|++++++++ +++++++++++ ... ++..+++++++.++..||++++++|...+++|+|+.|+|+++ |+.+++
T Consensus 193 Hr~~F~~~~~~~~-~~~~~~~~~~~~~~~~-~s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~a 269 (366)
T PRK10599 193 HQSLFVYEHEDEG-DDDDPHHGKPSAHSSL-WHAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILS 269 (366)
T ss_pred hHHHhcccccccc-ccccccccccccchhH-HHHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcc
Confidence 9999974322211 11111112222 333 356889999999999999999999999999999999999886 899999
Q ss_pred hHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHH
Q 013937 329 TEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFETASLFIAVLVVAFMLQEGTSNYFK 408 (433)
Q Consensus 329 pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~~~l~~svl~~~~~~~~g~~~~~~ 408 (433)
||+++|+.+|+|||+|.+++.++||++|+++|++|+.++++|++|+||++.|+++|++++++++++..+.++|||+||+|
T Consensus 270 pE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lvlig~~~g~pm~L~f~~~e~vlL~ltv~v~~~t~~dGrsN~Le 349 (366)
T PRK10599 270 PEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFLTGNELQFGLGAPEMVVMVASLVLCHISFSTGRTNVLN 349 (366)
T ss_pred hhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCHHHHHHHHHHHHHHHhccCCCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 013937 409 GLMLILGYLIVAASFY 424 (433)
Q Consensus 409 G~~Ll~~Y~i~~~~~~ 424 (433)
|.+++.+|..|+...+
T Consensus 350 G~~hL~lf~~y~~l~~ 365 (366)
T PRK10599 350 GAAHLALFAAYLMTIF 365 (366)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987654
No 6
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=8.1e-46 Score=369.33 Aligned_cols=310 Identities=22% Similarity=0.255 Sum_probs=242.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHHHH
Q 013937 93 WVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVL 169 (433)
Q Consensus 93 ~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvl 169 (433)
..++++++.++..+++++++++.+|+++| +.+.|++++++| |+||+++++.|+.+|++++++||++|||++|+++++
T Consensus 6 ~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~lil 85 (325)
T PRK10734 6 ALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILLIL 85 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHH
Confidence 46888999999999999999999999997 899999999999 799999999999999999999999999999999999
Q ss_pred HHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHH
Q 013937 170 GCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQLK 249 (433)
Q Consensus 170 G~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~l~ 249 (433)
|++.++++++.+++ .++++ ...++.+ ..++.. .. .+..++|+++++++++|+.|+++++|
T Consensus 86 g~~~l~~~~~~~~~--~~~~~-----~~~ll~~-~~~~~~-~~-----------~~~~l~~~~g~~ll~~~~~yl~~~~~ 145 (325)
T PRK10734 86 GLAALIRPFTVHSD--VLRRE-----LPLMLLV-SVLAGS-VL-----------YDGQLSRSDGIFLLLLAVLWLLFIVK 145 (325)
T ss_pred HHHHHhCCcccChH--HHHHH-----HHHHHHH-HHHHHH-HH-----------HCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999988754221 12111 1122221 111111 11 23568899999999999999999999
Q ss_pred hhhcccCCCCcCCCCCCCCCcccCccchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchh
Q 013937 250 SQVNLYNPFDEERGDGGDSDEEEAPELTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNAT 329 (433)
Q Consensus 250 ~h~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~p 329 (433)
+||+..++++|+. +++++++.+++.++++.+.+++++.+++.++|++++++.+.+++.+|+|+.++|++++|+|||+|
T Consensus 146 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslP 223 (325)
T PRK10734 146 IARLAERQGNDSL--TREQLAELPREGGLPVAFLWLGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLP 223 (325)
T ss_pred HHHhccccccccc--chhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHH
Confidence 9886432211110 01111111111245677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhh--cCCcccccchhHHHHHHHHHHHHHHHHH-hCCccch
Q 013937 330 EHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWF--MGQPMDLNFQLFETASLFIAVLVVAFML-QEGTSNY 406 (433)
Q Consensus 330 E~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~--~g~~~~l~~~~~~~~~l~~svl~~~~~~-~~g~~~~ 406 (433)
|+++++.++|||+.|+|+||++|||+||.+++++++.++... .+.++..++ ..++.++++++.+.+ +|+|++|
T Consensus 224 E~~~sv~a~~~g~~~~avgniiGsnifni~~~lg~~~l~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~r 299 (325)
T PRK10734 224 ELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALISPGEINPLAFSRDY----WVMLLVSVIFALLCWRRKRRIGR 299 (325)
T ss_pred HHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHhhccccccchhHHHHH----HHHHHHHHHHHHHHHHcCCccCh
Confidence 999999999999999999999999999999999999887421 122222222 234445544444444 6889999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 013937 407 FKGLMLILGYLIVAASFYVHVD 428 (433)
Q Consensus 407 ~~G~~Ll~~Y~i~~~~~~~~~~ 428 (433)
++|.+|+.+|.+|+...|++|.
T Consensus 300 ~~G~~Ll~~Y~~y~~~l~~~~~ 321 (325)
T PRK10734 300 GAGALLLGGFIVWLAMLYWLSP 321 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999888774
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=100.00 E-value=5e-42 Score=340.55 Aligned_cols=299 Identities=19% Similarity=0.234 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHHHH
Q 013937 93 WVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVL 169 (433)
Q Consensus 93 ~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvl 169 (433)
..|.+++..++..+++++++++.+++++| +.+.|++++++| |+||+++++.|.++|++++++||++|||++|+++++
T Consensus 5 ~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~i~ 84 (307)
T TIGR00367 5 GYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILLIL 84 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHHHH
Confidence 46788899999999999999999999998 999999999999 799999999999999999999999999999999999
Q ss_pred HHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHH
Q 013937 170 GCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQLK 249 (433)
Q Consensus 170 G~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~l~ 249 (433)
|++.++++++.+++ .+. .....++++...+.+ .. .++.++|.++++++.+|+.|++++.+
T Consensus 85 g~~~l~~~~~~~~~--~~~-----~d~~~~l~~~~~~~~--~~-----------~~g~i~~~~gi~ll~~Yv~yl~~~~~ 144 (307)
T TIGR00367 85 GLSAIFSPIIVDTD--WLR-----RDFSFYLLVSILLLF--FG-----------LDGPISRLDGVVLLFLYVVYLLFLVK 144 (307)
T ss_pred HHHHhhcceeechH--HHH-----HHHHHHHHHHHHHHH--HH-----------HhCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999987653221 122 222333333322221 11 12468999999999999999999999
Q ss_pred hhhcccCCCCcCCCCCCCCCcccCccchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchh
Q 013937 250 SQVNLYNPFDEERGDGGDSDEEEAPELTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNAT 329 (433)
Q Consensus 250 ~h~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~p 329 (433)
+||+..+ |+ .+++ +.++++.+.+.|+.+.+++++.+++..+|++++++++.+++.+|+|+.++|++++|++||+|
T Consensus 145 ~~~~~~~---~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~P 219 (307)
T TIGR00367 145 VERQMIN---DT-YTEE-QLDENNRRKQIFFLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLP 219 (307)
T ss_pred HHHhccc---cc-cchh-hhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccH
Confidence 9884211 11 0011 11111122356788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHH-HHHHHHHHHHHHHHhCCccchHH
Q 013937 330 EHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFET-ASLFIAVLVVAFMLQEGTSNYFK 408 (433)
Q Consensus 330 E~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~-~~l~~svl~~~~~~~~g~~~~~~ 408 (433)
|+++++.+++||+.|+++|+++|||++|.++++|++++++.. +++...-.++. .+++.++++..+..+||+.+|++
T Consensus 220 E~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 296 (307)
T TIGR00367 220 ELVVSVAAARKGLGDIAVGNVIGSNIFNILVGLGVPSLFYPI---PVEPLAYSLDAPVMVIVTLVLMLVFKTSMKLGRWE 296 (307)
T ss_pred HHHHHHHHHHcCCCchHHHHHhhhHHHHHHHHHHHHHHhccc---ccchhHHHHHHHHHHHHHHHHHHHHHhcCeehHHH
Confidence 999999999999999999999999999999999999888642 22211112333 44455555555667899999999
Q ss_pred HHHHHHHHHHH
Q 013937 409 GLMLILGYLIV 419 (433)
Q Consensus 409 G~~Ll~~Y~i~ 419 (433)
|++|+++|++|
T Consensus 297 g~~l~~~Y~~y 307 (307)
T TIGR00367 297 GFLLLALYIAY 307 (307)
T ss_pred HHHHHHHHHhC
Confidence 99999999876
No 8
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-41 Score=335.67 Aligned_cols=303 Identities=23% Similarity=0.325 Sum_probs=250.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHH
Q 013937 91 HEWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLL 167 (433)
Q Consensus 91 ~~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllL 167 (433)
..+.|..+++.++..|+++.++++.+++++| +.+.|.+++++| |+||+.+++.|..+|+++++.||++|||++|+++
T Consensus 11 ~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ni~l 90 (320)
T COG0530 11 LILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIFNILL 90 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHHHHHH
Confidence 4668899999999999999999999999998 789999999999 7999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHH
Q 013937 168 VLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQ 247 (433)
Q Consensus 168 vlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~ 247 (433)
++|++.++.+.+.+++ .++++ ..+++++...+.++ . .++++++.+++.++..|+.|+++.
T Consensus 91 i~gl~ali~~~~~~~~--~~~r~-----~~f~ll~~~~~~~~--~-----------~~~~~~~~~gi~ll~l~~~yl~~~ 150 (320)
T COG0530 91 ILGLAALIAPLKVDSD--VLRRE-----IPFLLLATLILLLV--L-----------LDGHLSRLDGIVLLLLYVLYLYYL 150 (320)
T ss_pred HHHHHHHHhhhHhhhh--HHHHh-----hHHHHHHHHHHHHH--H-----------HcCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999998765332 23333 23344443333322 1 347899999999999999999999
Q ss_pred HHhhhcccCCCCcCCCCCCCCCcccCc-cchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhh
Q 013937 248 LKSQVNLYNPFDEERGDGGDSDEEEAP-ELTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVG 326 (433)
Q Consensus 248 l~~h~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~t 326 (433)
+|++|+..++ +++++|.+ +.+..+.+.+++++.+.+.+++++++++..++++.+|+|+.++|++++|+||
T Consensus 151 ~~~~~~~~~~---------~~~~~e~~~~~~~~~~~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigT 221 (320)
T COG0530 151 LKLSREAEEP---------GEQENERPKKGSLRKALLVLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGT 221 (320)
T ss_pred HHhhhhcccc---------ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHc
Confidence 9988874321 12222333 5678899999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHH-HHHHHHHHHHHH-HHhCCcc
Q 013937 327 NATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFET-ASLFIAVLVVAF-MLQEGTS 404 (433)
Q Consensus 327 s~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~-~~l~~svl~~~~-~~~~g~~ 404 (433)
|+||.++++.++|||+.|+|+||++|||++|.++++|+..++.... ..-..-..+. ++++.++++..+ ..+++|.
T Consensus 222 SlPElv~si~a~rkg~~~iavGnviGSni~n~~~~lGi~~~~~~~~---~~~~~~~~~~~vmi~~~l~l~l~~~~~~~~i 298 (320)
T COG0530 222 SLPELVVSIVAARKGEDDIAVGNVIGSNIFNILIVLGISALIGPIT---VEPSALLVDAPVLILVTLLLLLFLARRRRRI 298 (320)
T ss_pred ccHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHHHhHHHhccccc---cCchhHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 9999999999999999999999999999999999999998885321 1111222333 445555555555 4789999
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 013937 405 NYFKGLMLILGYLIVAASFYV 425 (433)
Q Consensus 405 ~~~~G~~Ll~~Y~i~~~~~~~ 425 (433)
+|++|..+++.|++|.+..++
T Consensus 299 ~r~~g~~ll~~Y~~~~~~~~~ 319 (320)
T COG0530 299 GRKEGLLLLGLYIVYVALLIL 319 (320)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999987654
No 9
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=273.82 Aligned_cols=316 Identities=17% Similarity=0.237 Sum_probs=236.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHHHH
Q 013937 93 WVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVL 169 (433)
Q Consensus 93 ~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvl 169 (433)
.++.+-.+||+ +-+++.-+.+.+.+++| +-+.|.++++.| |+||++++++...--+.++++|+++||..||+|.|+
T Consensus 64 ~iYmFvALAIV-CDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiGTIVGSAvFNIL~Vi 142 (588)
T KOG1307|consen 64 LIYMFVALAIV-CDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIGTIVGSAVFNILCVI 142 (588)
T ss_pred HHHHHHHHHHH-hcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcceeeeeehhhhhHHHHH
Confidence 35556667665 88999999999999998 899999999999 999999999999999999999999999999999999
Q ss_pred HHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHH
Q 013937 170 GCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQLK 249 (433)
Q Consensus 170 G~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~l~ 249 (433)
|+|.++.+ +.........-+.++.++++++.+++ +| .+..+.+++|++|+.+|+.|.+|+-+
T Consensus 143 g~C~LFSr-----qvl~LtWWPLfRD~sfY~lsl~~Li~--Ff-----------~D~~I~WwEaL~L~~~Yi~Yv~~MKf 204 (588)
T KOG1307|consen 143 GVCGLFSR-----QVLNLTWWPLFRDVSFYTLSLIMLIY--FF-----------LDELIMWWEALALLLMYISYVVFMKF 204 (588)
T ss_pred HHHHhhcc-----cccccccchhhhhhHHHHHHHHHHHH--HH-----------HhhHHHHHHHHHHHHHHHHHheeeeh
Confidence 99998853 22333333334456677777665543 22 35678999999999999999986311
Q ss_pred --------hh---hc----------------------ccC-C-----------------------CC-------------
Q 013937 250 --------SQ---VN----------------------LYN-P-----------------------FD------------- 259 (433)
Q Consensus 250 --------~h---~~----------------------~~~-~-----------------------~~------------- 259 (433)
++ |+ .-+ . ++
T Consensus 205 N~~ie~~vk~~~~rn~v~v~a~~~~~~~~~~~~Aa~~~~~~~~~a~~p~~~~~~~~~i~ql~~~~~~~~~~~~g~~~~~~ 284 (588)
T KOG1307|consen 205 NGQIEQLVKKMLKRNKVNVLANGAEIKPGKNEDAAAELLDKSNAADLPHHNSASRNSIAQLMSGDPDPLSESAGLRIMIS 284 (588)
T ss_pred hhHHHHHHHHHhccCcceecccccccCCcccchhhhhhhccCccccccccchhhHhHHHHHhcCCCccchhhccCccccc
Confidence 00 00 000 0 00
Q ss_pred -------------------------c-C-C----------------------C---------------------------
Q 013937 260 -------------------------E-E-R----------------------G--------------------------- 263 (433)
Q Consensus 260 -------------------------e-~-~----------------------~--------------------------- 263 (433)
+ + + +
T Consensus 285 ~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~~i~~~~~h~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (588)
T KOG1307|consen 285 GHTPPNGRTQEKSRTLLQLPARLDNEDDNENGEKAVNIKIDIGDTHELDITGPNSGGRTSDVERIDVSDEEEEEAENENE 364 (588)
T ss_pred CCCCCCCchhhhhhhhhhcccccccccccccccccccccccccccceecccCCCCCcccCccccCCccccccchhcccCC
Confidence 0 0 0 0
Q ss_pred C-----CC----CCCcccCc------c--------------------------ch--hHHHHHHHHHHHHHHHHHHHHHH
Q 013937 264 D-----GG----DSDEEEAP------E--------------------------LT--QWEAIAWLAILTIWVSLLSGYLV 300 (433)
Q Consensus 264 ~-----~~----~~~~~~~~------~--------------------------~~--~~~~i~~l~~~~~~i~~~a~~lv 300 (433)
+ ++ +++++|+| + .+ +..-.+.++.++.||+..|+.+|
T Consensus 365 ~~~~~~e~~~~~~~e~~e~pl~~~wP~~~~k~l~y~~~~Pi~fpLw~TvPdvrkp~~rkfF~vTFigSIlWIA~fSYLMV 444 (588)
T KOG1307|consen 365 DNEEFEEEQESEEEEPEEEPLSFDWPETKRKRLTYAFLAPIVFPLWLTVPDVRKPRSRKFFPVTFIGSILWIAAFSYLMV 444 (588)
T ss_pred CCcchhhcchhhhccccCCCcCCCCccchhheeeeEEEeeeeeeEEEecCCcCCccccceeehHHHHHHHHHHHHHHHHH
Confidence 0 00 00001111 0 01 11234678899999999999999
Q ss_pred HhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhc-C--Cccc
Q 013937 301 DAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFM-G--QPMD 377 (433)
Q Consensus 301 ~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~-g--~~~~ 377 (433)
+.+..+++.+|||+.++|+|++|-|||.||++++++.||||-.|||+++.+|||+|.+++++|+++++.... + .++.
T Consensus 445 Wwa~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~~i~ 524 (588)
T KOG1307|consen 445 WWANIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKSKIS 524 (588)
T ss_pred HHHHHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhcCCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999999886443 2 2356
Q ss_pred ccchh--HHHHHHHHHHH--HHHHHHhCCccchHHHHHHHHHHHHHHHHHhhcc
Q 013937 378 LNFQL--FETASLFIAVL--VVAFMLQEGTSNYFKGLMLILGYLIVAASFYVHV 427 (433)
Q Consensus 378 l~~~~--~~~~~l~~svl--~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~ 427 (433)
...+. ..+.+|++.++ +....+.++|.|+.-|+.++..|.+|.+......
T Consensus 525 vsS~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~svmlE 578 (588)
T KOG1307|consen 525 VSSNGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISVMLE 578 (588)
T ss_pred ecCCceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhhhee
Confidence 65542 23455555443 3445578999999999999999999988755443
No 10
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=100.00 E-value=8.8e-32 Score=287.57 Aligned_cols=145 Identities=15% Similarity=0.210 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHH
Q 013937 282 IAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFV 361 (433)
Q Consensus 282 i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v 361 (433)
.+.++.++++|.+.+..+++.+..++..+|||+.++|++++++|+|+||+++++.+|++|..|||+++++|||+||++++
T Consensus 935 ~ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllg 1014 (1096)
T TIGR00927 935 VITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVG 1014 (1096)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeee
Confidence 46688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhc--CCcccccch-hH-HHHHHHHHHHHH--HHHHhCCccchHHHHHHHHHHHHHHHHHhhc
Q 013937 362 IPFCVVVGWFM--GQPMDLNFQ-LF-ETASLFIAVLVV--AFMLQEGTSNYFKGLMLILGYLIVAASFYVH 426 (433)
Q Consensus 362 ~pl~vli~~~~--g~~~~l~~~-~~-~~~~l~~svl~~--~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~ 426 (433)
+|+.+++.... ..++..... .+ .+++++..++.+ .+...+.+.+|..|++|+.+|++|+++.+..
T Consensus 1015 LGlPWlI~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLi 1085 (1096)
T TIGR00927 1015 LPVPWLLFSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVML 1085 (1096)
T ss_pred ccHHHHHHHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHH
Confidence 99998775433 234444333 22 223344333322 2234778999999999999999999886543
No 11
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.95 E-value=1e-24 Score=233.30 Aligned_cols=316 Identities=18% Similarity=0.218 Sum_probs=222.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhcc-CCceeeeecchhHHHHHHHH
Q 013937 92 EWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNN-GMIRVVQQSLLGSILSNMLL 167 (433)
Q Consensus 92 ~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~-g~~~i~~gsilGS~l~nllL 167 (433)
+.++.+..+++. .+++++.+.+.++++++ |.+.|+|++++| ++||+++++.|... +..+++.|+++||+++|+++
T Consensus 146 ~l~~lF~~L~~t-a~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~v 224 (650)
T PLN03151 146 WLVALFYLLGNT-AADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCV 224 (650)
T ss_pred HHHHHHHHHHHH-HHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHH
Confidence 345566666664 89999999999999997 999999999999 59999999998664 78999999999999999999
Q ss_pred HHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHH
Q 013937 168 VLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQ 247 (433)
Q Consensus 168 vlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~ 247 (433)
+.|++.++.+. +..+.++....+...++++++..+.+ ++ .++.++++++++++.+|++|+.+.
T Consensus 225 V~G~v~l~~~~----~pf~v~~~~f~RD~~F~lla~~~l~~--~l-----------~~g~v~~~eai~ll~lY~~Yv~vv 287 (650)
T PLN03151 225 VVGIVSLCVAD----KEVQIDKRCFIRDLCFFLFTLVSLLV--IL-----------MVGKVTVGGAIAFVSIYVVYAFLV 287 (650)
T ss_pred HHHHHHHhccC----CceeecchhHHHhHHHHHHHHHHHHH--HH-----------HcCeEhHHHHHHHHHHHHHHHHHH
Confidence 99999887421 12233444444455556666543321 11 246789999999999999999654
Q ss_pred H-----Hhhhc-c-cC--------------CC-Cc-----------CCCCC-----------------------------
Q 013937 248 L-----KSQVN-L-YN--------------PF-DE-----------ERGDG----------------------------- 265 (433)
Q Consensus 248 l-----~~h~~-~-~~--------------~~-~e-----------~~~~~----------------------------- 265 (433)
. +++++ . .+ ++ +| +++++
T Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 367 (650)
T PLN03151 288 AANEILRKHARRLKLDVVTPLLPVQGSIFSPSVEEDESMYSPLLESDTESDVPRLQTSLPQWMWASNVAIYSNHFAKGSV 367 (650)
T ss_pred HhhHHHHHHHHhhhhhhcccccccccccccccchhhhhhhhhhhcccccccchhhccccccccccccccccccchhhhhh
Confidence 2 11110 0 00 00 00 00000
Q ss_pred -C--------CCCcc-------------------------------cCccchhH--------------------------
Q 013937 266 -G--------DSDEE-------------------------------EAPELTQW-------------------------- 279 (433)
Q Consensus 266 -~--------~~~~~-------------------------------~~~~~~~~-------------------------- 279 (433)
+ ++++. ++++|+++
T Consensus 368 ~~~~~~~~~~~~~d~e~~~~~~~~~ki~~ll~~Pl~lll~LTIP~vd~~~WsK~l~~~q~~l~P~l~~~~~~~~~~~~~~ 447 (650)
T PLN03151 368 HDEERPPWGWTDEGAEVESSLFSCSKLFSLLEMPLTIPRRLTIPIVEEDRWSKTYAVASASLAPVLLAFLWSSQDDVSLQ 447 (650)
T ss_pred hhccccccccCchhhhhhcchhHHHHHHHHHHhHHHHHHHhcCCCCCcccCCHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 0 00000 00011110
Q ss_pred ------------------------------------HHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHh
Q 013937 280 ------------------------------------EAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLP 323 (433)
Q Consensus 280 ------------------------------------~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~ 323 (433)
..+..++.+.+++..+|..++..++.++..+|+|++++|+|+++
T Consensus 448 ~~~~vw~~~~~ig~~Lai~vf~~tr~d~PP~~~~~~~~~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA 527 (650)
T PLN03151 448 ARIAAYFIGVAIGSTLGFLAYKYTEPDRPPRRFLIPWVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLA 527 (650)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 12224556788999999999999999999999999999999999
Q ss_pred hhhchhHHHHHHHHHHhCC--cccHHHHhhhHHHHHHHHHHHHHHHHhhhcCC--cccccchh-HH-H-HHHHHHHH--H
Q 013937 324 IVGNATEHGSAIMFAMKDK--LDITIGVAIGSSTQISMFVIPFCVVVGWFMGQ--PMDLNFQL-FE-T-ASLFIAVL--V 394 (433)
Q Consensus 324 i~ts~pE~~~ai~aa~~g~--~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~--~~~l~~~~-~~-~-~~l~~svl--~ 394 (433)
+|+|++|+++.+..|++|. +.||+++++|++++|+++.+|+..++.-..++ ++....+. .. . ..++.+++ +
T Consensus 528 ~gnsi~Dlian~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~l 607 (650)
T PLN03151 528 WGNSMGDLMSNVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWAL 607 (650)
T ss_pred HHccHHHHHHHHHHHHcCCchhHHHHHHhhhhhHHHHHHhccHHHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999995 46788899999999999999999988754333 33233221 22 1 22222221 1
Q ss_pred HHHHHhCCccchHHHHHHHHHHHHHHHHHhh
Q 013937 395 VAFMLQEGTSNYFKGLMLILGYLIVAASFYV 425 (433)
Q Consensus 395 ~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~ 425 (433)
+....++.|.+|..|+.|+.+|++|+++...
T Consensus 608 i~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~~ 638 (650)
T PLN03151 608 VVLPRNDMRPNKTLGVGLIALYLIFLTFRVS 638 (650)
T ss_pred HHHHHhCeeechhHHHHHHHHHHHHHHHHHH
Confidence 1223478999999999999999999987543
No 12
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.82 E-value=3.2e-19 Score=178.31 Aligned_cols=140 Identities=16% Similarity=0.254 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHH
Q 013937 281 AIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMF 360 (433)
Q Consensus 281 ~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~ 360 (433)
.+.++++++.++..++++++++.+.+++++|+|+.++|++++++|||+||+++++.++++|+.|+++||++|||++|+++
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~l 83 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILL 83 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcccccchhH--HHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHhh
Q 013937 361 VIPFCVVVGWFMGQPMDLNFQLF--ETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFYV 425 (433)
Q Consensus 361 v~pl~vli~~~~g~~~~l~~~~~--~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~ 425 (433)
++++..++. |++.+.+.+ +...++.+.++..+...|++.+|++|++++..|+.|.++.+.
T Consensus 84 ilg~~~l~~-----~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~ 145 (325)
T PRK10734 84 ILGLAALIR-----PFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVK 145 (325)
T ss_pred HHHHHHHhC-----CcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 999998773 444444332 333333333334445689999999999999999999988663
No 13
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=99.80 E-value=2.3e-18 Score=181.90 Aligned_cols=312 Identities=18% Similarity=0.241 Sum_probs=221.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhcc-hhhHHHHHHHhccC-CceeeeecchhHHHHHHHH
Q 013937 92 EWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFGN-ATEMIISIYALNNG-MIRVVQQSLLGSILSNMLL 167 (433)
Q Consensus 92 ~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~gn-~pELiisi~Al~~g-~~~i~~gsilGS~l~nllL 167 (433)
+.++.+-.+. .-..++++-+.+.++.++. |++.|++++++|| +|+++.++.|...+ +++.+.++++|+.++-..+
T Consensus 110 ~~~~lf~~l~-~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~ 188 (605)
T KOG2399|consen 110 WLLFLFYLLG-ITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTV 188 (605)
T ss_pred HHHHHHHHHH-HHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEee
Confidence 3455555554 4589999999999999885 9999999999996 99999999987743 3579999999999999999
Q ss_pred HHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHH
Q 013937 168 VLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQ 247 (433)
Q Consensus 168 vlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~ 247 (433)
+.|...+..+.+.++.. ..+.-..++.+...+.+ +.. ...+++.+.+...+..|..|+.+.
T Consensus 189 V~G~i~~t~pFki~~~~-------~iRDi~Fll~al~~l~~---~~~---------~~~~v~~~~~l~fl~~y~~Yv~~v 249 (605)
T KOG2399|consen 189 VVGLIILTKPFKINANS-------FIRDILFLLLALLFLAF---ILL---------RGNKVEIWMALTFLGIYVVYVVTV 249 (605)
T ss_pred Eeeeeeeecceeeccch-------hHHHHHHHHHHHHHHHH---HHh---------cCCceeHHhHHHHhHHHHHHHHHH
Confidence 99998887776543322 22222334444322221 111 122677888999999999888733
Q ss_pred -------HHhhhc---------------ccCCC--------CcCC-----C----C------------------------
Q 013937 248 -------LKSQVN---------------LYNPF--------DEER-----G----D------------------------ 264 (433)
Q Consensus 248 -------l~~h~~---------------~~~~~--------~e~~-----~----~------------------------ 264 (433)
++++++ .+++. ++|+ + .
T Consensus 250 i~~~~~~i~~~~r~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (605)
T KOG2399|consen 250 IVLLSARIRKDRRKRFLELTPLRDMEESLFEALSVEPSIEEDEEELLRETHTHRFSGHDQMSNRAWTRIEIIYANNRNQD 329 (605)
T ss_pred HHHHHHHHHHHhhcchhccCCCcccchhhhcccccCCccccccchhhhhcCCCcccchhhhhhhhHHHHhhcccccchHH
Confidence 233332 11100 0000 0 0
Q ss_pred ----------CCCC----------------------------------C-------------------------------
Q 013937 265 ----------GGDS----------------------------------D------------------------------- 269 (433)
Q Consensus 265 ----------~~~~----------------------------------~------------------------------- 269 (433)
..+. +
T Consensus 330 ~~~d~~~~~~~~~~~~~~~~~~~~~kv~~~i~~p~~l~~~LtIP~v~~~~~Wsk~l~~~~~~~~P~~l~~~i~~~~~~~~ 409 (605)
T KOG2399|consen 330 LFSDFFRHLRPWDSDEEFYEMNILTKVLLIIKIPLVLLLRLTIPVVDSELSWSKPLNLLQVVLAPLLLLFLIQSLLYSIS 409 (605)
T ss_pred HHHHHHhccCCCCchhhhhhhhHHHHHHHHHhhhHhhhheeeecccCccccHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 0000 0
Q ss_pred -------------------------cccCcc-c-hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHH
Q 013937 270 -------------------------EEEAPE-L-TQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILL 322 (433)
Q Consensus 270 -------------------------~~~~~~-~-~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill 322 (433)
++++|. . +.....+.++.+.+|+..+|..++..++.++.-+|+|+++.|+|+.
T Consensus 410 ~~~~~~~~~~l~is~~la~l~~~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~ 489 (605)
T KOG2399|consen 410 QGSPGLYLISLIISIPLAILAFFFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVL 489 (605)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 000000 0 1112345577789999999999999999999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccch----hHHH-HHHHHHHH--HH
Q 013937 323 PIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQ----LFET-ASLFIAVL--VV 395 (433)
Q Consensus 323 ~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~----~~~~-~~l~~svl--~~ 395 (433)
|+|+|..|+++.+..|++|.+.||++.++|++++|.++.+|+..++.-..++|.+.... .+.+ +.+.++.+ ++
T Consensus 490 AWgNSiGDLIAniavak~G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv 569 (605)
T KOG2399|consen 490 AWGNSIGDLIANIAVAKQGYPRMAMAACIGGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLV 569 (605)
T ss_pred HHhccHHHHHHHHHHHHcCcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887777777664332 1222 22333322 33
Q ss_pred HHHHhCCccchHHHHHHHHHHHHHHHHH
Q 013937 396 AFMLQEGTSNYFKGLMLILGYLIVAASF 423 (433)
Q Consensus 396 ~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~ 423 (433)
.+..++.|.+|..|..|+.+|++|...+
T Consensus 570 ~~~~~~f~~~r~~gi~L~~lyi~f~~~~ 597 (605)
T KOG2399|consen 570 LIPTNRFRLRRVLGIGLLSLYIAFTLIF 597 (605)
T ss_pred HHhcccceeccchhhHHHHHHHHHHHHH
Confidence 4456899999999999999999995443
No 14
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.78 E-value=3e-18 Score=170.40 Aligned_cols=140 Identities=14% Similarity=0.246 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHH
Q 013937 282 IAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFV 361 (433)
Q Consensus 282 i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v 361 (433)
+.++.++.+++..++++++++++.+++++|+|+.++|++++|+|||+||+++++.++++|+.|+++|+++|||++|.+++
T Consensus 4 ~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~i 83 (307)
T TIGR00367 4 IGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILLI 83 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcccccch--hHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHhhc
Q 013937 362 IPFCVVVGWFMGQPMDLNFQ--LFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFYVH 426 (433)
Q Consensus 362 ~pl~vli~~~~g~~~~l~~~--~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~ 426 (433)
+|++.+++ |+..+.+ ..+...++++..++.+...||+.+|++|++|++.|.+|+...+..
T Consensus 84 ~g~~~l~~-----~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~ 145 (307)
T TIGR00367 84 LGLSAIFS-----PIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKV 145 (307)
T ss_pred HHHHHhhc-----ceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99998875 3333332 334445555555555667889999999999999999999887753
No 15
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.75 E-value=8.8e-18 Score=147.32 Aligned_cols=132 Identities=20% Similarity=0.369 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhh
Q 013937 291 WVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGW 370 (433)
Q Consensus 291 ~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~ 370 (433)
++..+|+++++++|.+++++|+|+.++|.+++|+++|+||.++++.++++|+.|+|+|+++||++++.+++.|+.+++++
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~ 81 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFGP 81 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS-
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hcCCcccccch--hHHHHHHHHHHHHHHHHH----hCCccchHHHHHHHHHHHHHHHH
Q 013937 371 FMGQPMDLNFQ--LFETASLFIAVLVVAFML----QEGTSNYFKGLMLILGYLIVAAS 422 (433)
Q Consensus 371 ~~g~~~~l~~~--~~~~~~l~~svl~~~~~~----~~g~~~~~~G~~Ll~~Y~i~~~~ 422 (433)
...++-..+.. ..+...+.++.++..... +++|.+|++|++++.+|++|++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 82 IKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 64332222222 223333444434433333 49999999999999999999864
No 16
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.73 E-value=1.8e-17 Score=178.47 Aligned_cols=136 Identities=15% Similarity=0.314 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHH
Q 013937 289 TIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVV 368 (433)
Q Consensus 289 ~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli 368 (433)
.++...|++|+|.+++.+++.+|+|+.++|+|++|+|||+||+++++.++++++.|+++|+++|||++|++++++++.++
T Consensus 469 v~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~sDIGVGNIVGSnIFNILLVLGl~aLi 548 (1096)
T TIGR00927 469 VALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALF 548 (1096)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCCcceehhhHhHHHHHHHHHHhhheee
Confidence 44556777999999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred hhhcCCcccccc--hhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHhhcc
Q 013937 369 GWFMGQPMDLNF--QLFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFYVHV 427 (433)
Q Consensus 369 ~~~~g~~~~l~~--~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~ 427 (433)
. +..+.++. -..+...+++++.++.+++.|++++|++|++|+++|++|++.+++..
T Consensus 549 s---~~~l~Ld~~~L~RDllFyILAv~lLilf~lDG~Itr~EgIILLlLYiiYVvvm~~n~ 606 (1096)
T TIGR00927 549 S---REILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYALYVFTMKWNK 606 (1096)
T ss_pred c---cccccccccceehhHHHHHHHHHHHHHHHhCCeEcHHHHHHHHHHHHHHHHHHHHhH
Confidence 4 22232221 22356556666555555667999999999999999999998877653
No 17
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=6.5e-17 Score=160.94 Aligned_cols=149 Identities=18% Similarity=0.249 Sum_probs=128.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHH
Q 013937 277 TQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQ 356 (433)
Q Consensus 277 ~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~ 356 (433)
..+..+..++.++.++..+|++++++.+.+++++|+|+.++|.|+++++|++||..+++.++.+|+.|+++||++|||+.
T Consensus 7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ 86 (320)
T COG0530 7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIF 86 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHhhccc
Q 013937 357 ISMFVIPFCVVVGWFMGQPMDLNFQLFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFYVHVD 428 (433)
Q Consensus 357 ~~l~v~pl~vli~~~~g~~~~l~~~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~~ 428 (433)
|++++.++..++.. .+.+-..-..|...++++.+.+.+...+++.+|++|+.++.+|.+|+...+..+.
T Consensus 87 ni~li~gl~ali~~---~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~ 155 (320)
T COG0530 87 NILLILGLAALIAP---LKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSR 155 (320)
T ss_pred HHHHHHHHHHHHhh---hHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999977742 2222221234555555565666678899999999999999999999999887653
No 18
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.62 E-value=3.7e-15 Score=163.12 Aligned_cols=177 Identities=19% Similarity=0.277 Sum_probs=127.7
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHH
Q 013937 65 VIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIIS 141 (433)
Q Consensus 65 ~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiis 141 (433)
.+++-.|++++.|+|+ ...|..+..|+++.+.|..++..+++.+..+++.+| +.+.|++++++| |+||++++
T Consensus 734 ~~l~~~wk~lfa~vPP-----~~~~~g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S 808 (928)
T TIGR00845 734 HFLTVFWKVLFAFVPP-----TEYWGGWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFAS 808 (928)
T ss_pred HHHHhHHHhEEeecCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHH
Confidence 4566678899999998 335556789999999999999999999999999998 899999999999 89999999
Q ss_pred HHHhccCC-ceeeeecchhHHHHHHHHHHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhc-ccc
Q 013937 142 IYALNNGM-IRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTR-TEV 219 (433)
Q Consensus 142 i~Al~~g~-~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~-~~~ 219 (433)
++|+++|+ .++++||++|||++|+++++|+++++.+++...+...+..........+.++.+++++.-+++.+.. ...
T Consensus 809 ~~aA~~~~~~d~aigNv~GSNifNi~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~ 888 (928)
T TIGR00845 809 KVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEI 888 (928)
T ss_pred HHHHHcCCCCceeEEeecchHHHHHHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999976 9999999999999999999999999987654333333333222222222222223333333332222 111
Q ss_pred --ccCcccccchHHHHHHHHHHHHHHHHHH
Q 013937 220 --HFGKSELALSRFSSCVMLIAYASYLFFQ 247 (433)
Q Consensus 220 --~~~~~~~~lS~~~siiLl~~Y~~yl~f~ 247 (433)
..+ ....-.+.++.+++.++++|+.+.
T Consensus 889 g~elg-gp~~~~~~~~~~~~~lw~~y~~~s 917 (928)
T TIGR00845 889 GGELG-GPRTAKLLTSALFVLLWLLYILFS 917 (928)
T ss_pred cceeC-CCCCcchhhhHHHHHHHHHHHHHH
Confidence 111 112233467888888888888875
No 19
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.61 E-value=3e-16 Score=157.13 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=142.4
Q ss_pred ccccccccccchhhHHHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--Cchhh
Q 013937 49 RVFKQIRMGPLSSIHTVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGG 126 (433)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgG 126 (433)
.....+++...+++++++..+-...|...+|-.--.+..+|- +..|+.+.+.|...++++.+-+.++++.+| +.+.|
T Consensus 384 pl~~~wP~~~~k~l~y~~~~Pi~fpLw~TvPdvrkp~~rkfF-~vTFigSIlWIA~fSYLMVWwa~~iGeT~gIp~eIMG 462 (588)
T KOG1307|consen 384 PLSFDWPETKRKRLTYAFLAPIVFPLWLTVPDVRKPRSRKFF-PVTFIGSILWIAAFSYLMVWWANIIGETLGIPDEIMG 462 (588)
T ss_pred CcCCCCccchhheeeeEEEeeeeeeEEEecCCcCCcccccee-ehHHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHhh
Confidence 446778888888888888888888888888831111111111 468999999999999999999999999998 78999
Q ss_pred HHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHHHHHHHHhhcceeeccce-EEEcccchHHHHHHHHHHHH
Q 013937 127 LLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHKKV-QVFNKASAVVNSGLLLMAVM 204 (433)
Q Consensus 127 ll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~~~-~~~~~~~a~~~s~lllla~~ 204 (433)
+++++.| |.||+|++++-++||..|++++|-+|||+|+++..||+.|++..+.+..+. ...+..+......++++.++
T Consensus 463 LTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~~i~vsS~GL~csi~lLf~ml~ 542 (588)
T KOG1307|consen 463 LTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKSKISVSSNGLVCSIGLLFAMLI 542 (588)
T ss_pred hhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhcCCceeecCCceehHHHHHHHHHH
Confidence 9999999 899999999999999999999999999999999999999998876543333 44444433333333333332
Q ss_pred HHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHH
Q 013937 205 GIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQLK 249 (433)
Q Consensus 205 ~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~l~ 249 (433)
.+++-.+. ...+++...|..++++|++|+.+..-
T Consensus 543 v~v~~ia~-----------~rWrMnK~lG~~m~llY~~Fl~~svm 576 (588)
T KOG1307|consen 543 VLVLGIAL-----------SRWRMNKILGFLMILLYFVFLIISVM 576 (588)
T ss_pred HHHHHHHH-----------HhhhcccchhHHHHHHHHHHHHhhhh
Confidence 22222222 23577888999999999999998764
No 20
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.56 E-value=4.3e-14 Score=151.93 Aligned_cols=132 Identities=12% Similarity=0.198 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHh-CCcccHHHHhhhHHHHHHHHHHHHHHHHh
Q 013937 291 WVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMK-DKLDITIGVAIGSSTQISMFVIPFCVVVG 369 (433)
Q Consensus 291 ~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~-g~~dlaig~~iGS~i~~~l~v~pl~vli~ 369 (433)
+-..++++++++++.+++.+++|+.+.|+|++|+|+++||.++++.++.+ ++.|+++|+++||+++|++++.|+..++.
T Consensus 154 L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~ 233 (650)
T PLN03151 154 LGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCV 233 (650)
T ss_pred HHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhc
Confidence 44567899999999999999999999999999999999999999988765 67899999999999999999999997763
Q ss_pred hhcCCcccccch--hHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHh
Q 013937 370 WFMGQPMDLNFQ--LFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFY 424 (433)
Q Consensus 370 ~~~g~~~~l~~~--~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~ 424 (433)
. .+|+..+.. ..|...+++++.++.+.+.+|+.++++|+.++++|++|++...
T Consensus 234 ~--~~pf~v~~~~f~RD~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~ 288 (650)
T PLN03151 234 A--DKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVA 288 (650)
T ss_pred c--CCceeecchhHHHhHHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHH
Confidence 1 235554443 4466666666666666678999999999999999999987654
No 21
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.54 E-value=4.5e-14 Score=154.70 Aligned_cols=144 Identities=14% Similarity=0.243 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCC-cccHHHHhhhHHHHH
Q 013937 279 WEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDK-LDITIGVAIGSSTQI 357 (433)
Q Consensus 279 ~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~-~dlaig~~iGS~i~~ 357 (433)
|..+..++++++++.+.+..+++.+..++..+|+|++++|++++++|||+||+++++.+|+||+ .|+|+||++|||++|
T Consensus 753 ~~g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifN 832 (928)
T TIGR00845 753 WGGWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVN 832 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHH
Confidence 3455678888999999999999999999999999999999999999999999999999999976 999999999999999
Q ss_pred HHHHHHHHHHHhhh----cCCcccccch--hHHH-HHHHHHHHHHHHH-HhCC-----------ccchHHHHHHHHHHHH
Q 013937 358 SMFVIPFCVVVGWF----MGQPMDLNFQ--LFET-ASLFIAVLVVAFM-LQEG-----------TSNYFKGLMLILGYLI 418 (433)
Q Consensus 358 ~l~v~pl~vli~~~----~g~~~~l~~~--~~~~-~~l~~svl~~~~~-~~~g-----------~~~~~~G~~Ll~~Y~i 418 (433)
+++++|+++++... .|.|+..... .++. ++++++++++..+ +|+. ...|....+++.++++
T Consensus 833 i~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~~ 912 (928)
T TIGR00845 833 VFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWLL 912 (928)
T ss_pred HHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHHH
Confidence 99999999988632 2445444422 3332 3333444333333 2321 2346667788887777
Q ss_pred HHHH
Q 013937 419 VAAS 422 (433)
Q Consensus 419 ~~~~ 422 (433)
|++.
T Consensus 913 y~~~ 916 (928)
T TIGR00845 913 YILF 916 (928)
T ss_pred HHHH
Confidence 7654
No 22
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.50 E-value=3.3e-14 Score=124.57 Aligned_cols=136 Identities=26% Similarity=0.350 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHHHHHHHHhhc
Q 013937 100 LGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVLGCSFFIG 176 (433)
Q Consensus 100 l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvlG~~~l~g 176 (433)
+++..+++++.+..|.+++++| +.+.|+++.+++ |+||+++++.+.++|+++++.++++||+++|++++.|++.+.+
T Consensus 1 i~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~ 80 (140)
T PF01699_consen 1 ILIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFG 80 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS
T ss_pred CEehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhc
Confidence 4678899999999999999876 788888888888 7999999999999999999999999999999999999999999
Q ss_pred ceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHH
Q 013937 177 GIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFF 246 (433)
Q Consensus 177 g~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f 246 (433)
+.+. +++..+.........++++....+. .+.... ....++++..+++++.+|++|+++
T Consensus 81 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 81 PIKL--GSQTIDWSSFTRDFSFLLLAILLLI---LFFLAF------IRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp -B-----------HHHHHHHHHHHHHHHHHH---HCCT---------HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred cccc--cccccccchHHHHHHHHHHHHHHHH---HHHHHH------HcCCeEhHHHHHHHHHHHHHHHhc
Confidence 8753 2344444444444333333322111 111100 135678999999999999999986
No 23
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.46 E-value=8.4e-13 Score=134.28 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHH
Q 013937 284 WLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIP 363 (433)
Q Consensus 284 ~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~p 363 (433)
.++.+.+++..++++++++.+.+++++|+| +|.++++.+||+||+++++.++.+|+.|++.||++|||+.|+++++|
T Consensus 39 ~F~~~~~~li~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIlG 115 (365)
T TIGR00846 39 IFLLNLLGIIPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVLG 115 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 566788899999999999999999999987 66667799999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcccccchhHHH----HHHHHHHHHHHH-----HHhCC-----ccchHHHHHHHHHHHHHHHHHhh
Q 013937 364 FCVVVGWFMGQPMDLNFQLFET----ASLFIAVLVVAF-----MLQEG-----TSNYFKGLMLILGYLIVAASFYV 425 (433)
Q Consensus 364 l~vli~~~~g~~~~l~~~~~~~----~~l~~svl~~~~-----~~~~g-----~~~~~~G~~Ll~~Y~i~~~~~~~ 425 (433)
++.+++...-++ +..++.... .++.++++...+ ...++ ..+|.+|++++.+|++|..+.+.
T Consensus 116 l~~l~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~ 190 (365)
T TIGR00846 116 LSLFLGGIKNIR-EQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLV 190 (365)
T ss_pred HHHHHhccCccc-eeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998886432101 111222221 223333221111 11344 58899999999999999987764
No 24
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.46 E-value=9.3e-13 Score=133.28 Aligned_cols=140 Identities=14% Similarity=0.110 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHH
Q 013937 282 IAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFV 361 (433)
Q Consensus 282 i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v 361 (433)
...++.+.+.+.-.+++++++.+.+++++| +.+.|++.+++|| +||+++++.++++|+.|++.||++|||+.|.+++
T Consensus 19 ~~~F~~~~~aiipla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLi 95 (349)
T TIGR00378 19 TLTFLFNFLAIIPLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIVQASLTGSLLGNLLLV 95 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHH
Confidence 346778888999999999999999999999 7899999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcccccchh--HHHHHHHHHHHHHHHH------H---hCC---ccchHHHHHHHHHHHHHHHHHh
Q 013937 362 IPFCVVVGWFMGQPMDLNFQL--FETASLFIAVLVVAFM------L---QEG---TSNYFKGLMLILGYLIVAASFY 424 (433)
Q Consensus 362 ~pl~vli~~~~g~~~~l~~~~--~~~~~l~~svl~~~~~------~---~~g---~~~~~~G~~Ll~~Y~i~~~~~~ 424 (433)
+|++.+++....+.-..+.+. ....++.++++...+. . .|+ ..+|.+|++++.+|++|..+.+
T Consensus 96 lGls~liggl~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l 172 (349)
T TIGR00378 96 LGLCFFFGGLNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQL 172 (349)
T ss_pred HHHHHHHhccccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998875432222222221 1122223332222111 0 133 5778899999999999998775
No 25
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.17 E-value=8.9e-12 Score=126.22 Aligned_cols=179 Identities=16% Similarity=0.218 Sum_probs=132.3
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHH
Q 013937 64 TVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMII 140 (433)
Q Consensus 64 ~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELii 140 (433)
+.++.-.|++||.|||+ ..-++.+.+|+++++.|..+...+++.++.+++..| +.+.+++++++| |.|+.+.
T Consensus 405 WH~l~~~WK~lFAfvPP-----t~~~~Gw~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfA 479 (596)
T KOG1306|consen 405 WHFLTVPWKVLFAFVPP-----TEICHGWACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFA 479 (596)
T ss_pred hHHHHHHHHHHeeeCCc-----hhhcCccHHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHH
Confidence 46778889999999998 566778899999999999999999999999999998 999999999999 8999999
Q ss_pred HHHHhccCC-ceeeeecchhHHHHHHHHHHHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 013937 141 SIYALNNGM-IRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEV 219 (433)
Q Consensus 141 si~Al~~g~-~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~ 219 (433)
+-+|+.+++ .|-.+||+.|||-.|..|.+|++|.+.......+...|+........+..++...+++.-.++.+..+..
T Consensus 480 SkiAA~~d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~i 559 (596)
T KOG1306|consen 480 SKIAAEQDQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHI 559 (596)
T ss_pred HHHHHhhcccccccccceecccceeEEEeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEecccc
Confidence 999988766 7999999999999999999999999887654444455655433333222333222222222232322211
Q ss_pred ccCcc--cccchHHHHHHHHHHHHHHHHHHH
Q 013937 220 HFGKS--ELALSRFSSCVMLIAYASYLFFQL 248 (433)
Q Consensus 220 ~~~~~--~~~lS~~~siiLl~~Y~~yl~f~l 248 (433)
. ++. ...-...++.+++.++++|+.+..
T Consensus 560 g-gELGGP~~~k~~ta~~fv~lW~~yv~~s~ 589 (596)
T KOG1306|consen 560 G-GELGGPRGWKLLTAALFVSLWLLYVLLSS 589 (596)
T ss_pred C-cccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 112234577888888999988764
No 26
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=98.55 E-value=8.7e-07 Score=89.55 Aligned_cols=136 Identities=15% Similarity=0.177 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhcchhhHHHHHHHhccCCceeeeecchhHHHHHHHHHHHHH
Q 013937 95 FFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFGNATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVLGCS 172 (433)
Q Consensus 95 F~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~gn~pELiisi~Al~~g~~~i~~gsilGS~l~nllLvlG~~ 172 (433)
.+.+.++++.+++.++...|...+.+| +.++|++.+.+||+||-++++.|.++|+.+.+.+-.+||.+.-.+++....
T Consensus 227 L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~l 306 (366)
T PRK10599 227 LIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVV 306 (366)
T ss_pred HHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHcchhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667788899999999999999998 899999999999999999999999999999999999999999998888777
Q ss_pred HhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHHH
Q 013937 173 FFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFFQ 247 (433)
Q Consensus 173 ~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f~ 247 (433)
.++|-.- ++...++-+..++ .++.+++ ++- .+ +. .+++-++.+|..++.+|+.|++..
T Consensus 307 vlig~~~--g~pm~L~f~~~e~--vlL~ltv---~v~-~~--t~-------~dGrsN~LeG~~hL~lf~~y~~l~ 364 (366)
T PRK10599 307 TLIAFLT--GNELQFGLGAPEM--VVMVASL---VLC-HI--SF-------STGRTNVLNGAAHLALFAAYLMTI 364 (366)
T ss_pred HHHHHHh--CCCeEecCCHHHH--HHHHHHH---HHH-Hh--cc-------CCCchHHHHHHHHHHHHHHHHHHH
Confidence 6666442 2333333333322 1222222 111 11 11 457788999999999999999765
No 27
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.21 E-value=2.9e-05 Score=83.16 Aligned_cols=163 Identities=24% Similarity=0.338 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHhhhcC---Cc--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHH
Q 013937 74 LLPFGPLVILLHYVTE---KH--------EWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMI 139 (433)
Q Consensus 74 ll~~vP~~~~~~~~~~---~~--------~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELi 139 (433)
+....|+++++...+. ++ ..-|..+...|.-+|.-+....+.++..+| |++-|+|..+.| |.=+++
T Consensus 420 l~is~~la~l~~~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLI 499 (605)
T KOG2399|consen 420 LIISIPLAILAFFFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLI 499 (605)
T ss_pred HHHHHHHHHHHHHhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHH
Confidence 5667778877766543 11 134666677777778888888888888887 999999999999 689999
Q ss_pred HHHHHhccCCceeeeecchhHHHHHHHHHHHHHHhhcceeeccceEEEcc-cch-HHHHHHHHHHHHHHHHHHHhhhhcc
Q 013937 140 ISIYALNNGMIRVVQQSLLGSILSNMLLVLGCSFFIGGIIHHKKVQVFNK-ASA-VVNSGLLLMAVMGIMFPAVLHFTRT 217 (433)
Q Consensus 140 isi~Al~~g~~~i~~gsilGS~l~nllLvlG~~~l~gg~~~~~~~~~~~~-~~a-~~~s~lllla~~~lllp~~~~~~~~ 217 (433)
..+.-+++|.+++|.++.+|+-++|++..+|+..+......+ ....... +.. ......+.++.+..++ ...+
T Consensus 500 Aniavak~G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~fL~i~l~~slv---~~~~-- 573 (605)
T KOG2399|consen 500 ANIAVAKQGYPRMAMAACIGGPLFNLLVGLGLPLVISSLQGK-PGNIVIPEDNSLRITLIFLLIGLLTSLV---LIPT-- 573 (605)
T ss_pred HHHHHHHcCcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhcC-CCceecccCCceehhHHHHHHHHHHHHH---HHhc--
Confidence 999999999999999999999999999999999888755422 2221221 111 1122333333322221 1111
Q ss_pred ccccCcccccchHHHHHHHHHHHHHH-HHHHH
Q 013937 218 EVHFGKSELALSRFSSCVMLIAYASY-LFFQL 248 (433)
Q Consensus 218 ~~~~~~~~~~lS~~~siiLl~~Y~~y-l~f~l 248 (433)
...++.|..++.|+.+|+.| +++.+
T Consensus 574 ------~~f~~~r~~gi~L~~lyi~f~~~~~l 599 (605)
T KOG2399|consen 574 ------NRFRLRRVLGIGLLSLYIAFTLIFIL 599 (605)
T ss_pred ------ccceeccchhhHHHHHHHHHHHHHHH
Confidence 44678899999999999999 55544
No 28
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=98.12 E-value=3.8e-05 Score=77.10 Aligned_cols=138 Identities=22% Similarity=0.258 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhhHHHHhhc-chhhHHHHHHHhccCCceeeeecchhHHHHHHHHH
Q 013937 92 EWVFFFSLLGITPLAERLGFATEQLAFYTG--PTVGGLLNATFG-NATEMIISIYALNNGMIRVVQQSLLGSILSNMLLV 168 (433)
Q Consensus 92 ~~iF~~~~l~ii~la~~l~~~~e~la~~~g--~~vgGll~a~~g-n~pELiisi~Al~~g~~~i~~gsilGS~l~nllLv 168 (433)
..+.....+.+..+++.++...|+..+.+| +.+.|++.+++- |+||.+.++.+.++|+.+.+..-..||.+.-.++.
T Consensus 223 ~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~llt 302 (368)
T COG0387 223 TGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLT 302 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 345566777788899999999999999998 889999988876 99999999999999999999999999988887776
Q ss_pred HHHHHhhcceeeccceEEEcccchHHHHHHHHHHHHHHHHHHHhhhhccccccCcccccchHHHHHHHHHHHHHHHHH
Q 013937 169 LGCSFFIGGIIHHKKVQVFNKASAVVNSGLLLMAVMGIMFPAVLHFTRTEVHFGKSELALSRFSSCVMLIAYASYLFF 246 (433)
Q Consensus 169 lG~~~l~gg~~~~~~~~~~~~~~a~~~s~lllla~~~lllp~~~~~~~~~~~~~~~~~~lS~~~siiLl~~Y~~yl~f 246 (433)
.....+++=+ .++...++-...+ ..++..+ +++-... + ++++-++..|..++.+|+.|.+-
T Consensus 303 iP~lvlis~~--~gqpm~l~~~~~e--lV~l~~~---v~~~~~~---~-------sdG~sn~leG~~lL~lya~~~~~ 363 (368)
T COG0387 303 IPVLVLISLF--TGQPLTLGFGPPE--LVLLVVT---VFLANIL---F-------SDGRTNWLEGVVLLALYAIYAML 363 (368)
T ss_pred HHHHHHHHHH--hCCCccccCCHHH--HHHHHHH---HHHHHHh---c-------CCCchHHHHHHHHHHHHHHHHHH
Confidence 6554443322 1122222222222 1112222 2221111 1 56788899999999999999863
No 29
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.08 E-value=2.4e-06 Score=87.38 Aligned_cols=140 Identities=15% Similarity=0.251 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCC-cccHHHHhhhHHHHHHHHH
Q 013937 283 AWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDK-LDITIGVAIGSSTQISMFV 361 (433)
Q Consensus 283 ~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~-~dlaig~~iGS~i~~~l~v 361 (433)
..++++++.|.+..-.+-+-...++-..|+.+++..++++|+|||.|+.+.+-.||.+++ .|-++||+-|||--|..++
T Consensus 429 ~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvflG 508 (596)
T KOG1306|consen 429 ACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFLG 508 (596)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccccceecccceeEEEe
Confidence 446777888888888888889999999999999999999999999999999999998876 7999999999999999999
Q ss_pred HHHHHHHh---hhc-CCcccccchh--HH-HHHHHHHHHHHH-HHHhCCc----------cchHHHHHHHHHHHHHHHH
Q 013937 362 IPFCVVVG---WFM-GQPMDLNFQL--FE-TASLFIAVLVVA-FMLQEGT----------SNYFKGLMLILGYLIVAAS 422 (433)
Q Consensus 362 ~pl~vli~---~~~-g~~~~l~~~~--~~-~~~l~~svl~~~-~~~~~g~----------~~~~~G~~Ll~~Y~i~~~~ 422 (433)
+|+.+.++ |.. |.|+...... |. +.....+++... +.+|+.. ..+....+++.++++|+..
T Consensus 509 iG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~iggELGGP~~~k~~ta~~fv~lW~~yv~~ 587 (596)
T KOG1306|consen 509 IGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHIGGELGGPRGWKLLTAALFVSLWLLYVLL 587 (596)
T ss_pred ccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEeccccCcccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999875 332 5565443322 22 122223333222 2233321 2345556777777777654
No 30
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=97.22 E-value=0.0083 Score=60.54 Aligned_cols=138 Identities=17% Similarity=0.136 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHHHHHH
Q 013937 284 WLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISMFVIP 363 (433)
Q Consensus 284 ~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l~v~p 363 (433)
.++.+.+.+.=.|+++-...|.++.+.|. + +|-.+=|.-+|+-|++.++.|-+|||..+.=+..+||-+-|.+++.|
T Consensus 98 vF~lsll~iiPLA~~l~~ateqls~~tg~--t-vGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG 174 (441)
T KOG1397|consen 98 VFLLSLLGIIPLAERLGFATEQLSAYTGP--T-VGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLG 174 (441)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhhcCC--c-HHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhh
Confidence 45566777888899999999999998873 3 45556677779999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCcccccch--hHH--HHHHHHHHHHH------HHHHhCC-----------ccchHHHHHHHHHHHHHHHH
Q 013937 364 FCVVVGWFMGQPMDLNFQ--LFE--TASLFIAVLVV------AFMLQEG-----------TSNYFKGLMLILGYLIVAAS 422 (433)
Q Consensus 364 l~vli~~~~g~~~~l~~~--~~~--~~~l~~svl~~------~~~~~~g-----------~~~~~~G~~Ll~~Y~i~~~~ 422 (433)
.+...|-+.++. -.|+ .-+ ..++.++++.. .+...+. ..+|...++++..|++|++.
T Consensus 175 ~s~~~Ggi~rk~--Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~F 252 (441)
T KOG1397|consen 175 LSLFCGGIRRKD--QRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWF 252 (441)
T ss_pred HHHhhcccccce--eecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHH
Confidence 988777554332 2333 222 23444443322 1122211 23578889999999999987
Q ss_pred Hhhc
Q 013937 423 FYVH 426 (433)
Q Consensus 423 ~~~~ 426 (433)
...-
T Consensus 253 qL~t 256 (441)
T KOG1397|consen 253 QLKT 256 (441)
T ss_pred hhhc
Confidence 6543
No 31
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=77.87 E-value=1.5e+02 Score=34.95 Aligned_cols=69 Identities=22% Similarity=0.237 Sum_probs=39.9
Q ss_pred HhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHH
Q 013937 339 MKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFETASLFIAVLVVAFMLQEGTSNYFKGLMLI 413 (433)
Q Consensus 339 ~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll 413 (433)
.+.+.|-..+..+.+-+.....++++...++. .|.+.+ .+....-+++ +.+++-+++--.|...|++++
T Consensus 863 ~~~~l~~~~~~~i~~l~~y~I~~ig~l~~L~~-lGI~~t----~l~al~galG-VgIGfAlQ~ilsNfiSGIiIL 931 (1109)
T PRK10929 863 QHLDLTPGTGYAITTITKYLLMLIGGLVGFSM-IGIEWS----KLQWLVAALG-VGLGFGLQEIFANFISGLIIL 931 (1109)
T ss_pred hhcCCChhHHHHHHHHHHHHHHHHHHHHHHHH-cCCChH----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 34456778888888888777777777766653 244422 1222212222 234555666666777777655
No 32
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=55.83 E-value=28 Score=35.29 Aligned_cols=25 Identities=20% Similarity=0.025 Sum_probs=10.9
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhcCC
Q 013937 66 IFKSKINVLLPFGPLVILLHYVTEK 90 (433)
Q Consensus 66 ~~~~~~~~ll~~vP~~~~~~~~~~~ 90 (433)
......|..+....+|++....++.
T Consensus 238 ~~~~~~nP~~~a~~lgli~~~~~~~ 262 (385)
T PF03547_consen 238 ILKLFKNPPLIAIILGLIIGLIPPL 262 (385)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 3333344444444444444444433
No 33
>COG1288 Predicted membrane protein [Function unknown]
Probab=48.33 E-value=3.6e+02 Score=28.57 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=29.2
Q ss_pred HHHHHHhhhcCCcccccch-hHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHhhccc
Q 013937 363 PFCVVVGWFMGQPMDLNFQ-LFETASLFIAVLVVAFMLQEGTSNYFKGLMLILGYLIVAASFYVHVD 428 (433)
Q Consensus 363 pl~vli~~~~g~~~~l~~~-~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll~~Y~i~~~~~~~~~~ 428 (433)
+...++|...|..+-++-. ..+++.-..+-++ +| -..++.-++.|+.+...-|+-|.
T Consensus 338 ~~aLiiGiARgI~lim~~g~i~dTiL~~~~~~l------sg---ls~~~f~i~mli~~~~l~f~VpS 395 (481)
T COG1288 338 GVALIIGLARGINLIMDDGMILDTILNYLASLL------SG---LSSAVFAIGMLIFQALLNFFVPS 395 (481)
T ss_pred HHHHHHHhhhceEEEecCcchHHHHHHHHHHHH------hc---CCHHHHHHHHHHHHHHheEEEeC
Confidence 4445556555655544332 3344433333222 12 22445666777777777666665
No 34
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=47.28 E-value=93 Score=26.49 Aligned_cols=21 Identities=10% Similarity=0.012 Sum_probs=16.6
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 013937 91 HEWVFFFSLLGITPLAERLGF 111 (433)
Q Consensus 91 ~~~iF~~~~l~ii~la~~l~~ 111 (433)
.+..++++++..+|..+.+..
T Consensus 76 ~~~llilG~L~fIPG~Y~~~i 96 (115)
T PF05915_consen 76 GWALLILGILCFIPGFYHTRI 96 (115)
T ss_pred cchHHHHHHHHHhccHHHHHH
Confidence 367889999999998877654
No 35
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=45.94 E-value=3.8e+02 Score=28.16 Aligned_cols=25 Identities=12% Similarity=0.110 Sum_probs=14.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHh
Q 013937 226 LALSRFSSCVMLIAYASYLFFQLKS 250 (433)
Q Consensus 226 ~~lS~~~siiLl~~Y~~yl~f~l~~ 250 (433)
...+...|.++.++-++|.-++-.+
T Consensus 283 ~~~~~iig~i~~~~~v~yss~ra~~ 307 (429)
T PF03348_consen 283 NTWQSIIGLIFTFVSVLYSSFRASS 307 (429)
T ss_pred chHHHHHHHHHHHHHHHHhcccccc
Confidence 3444556666666666666554443
No 36
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=45.88 E-value=1.9e+02 Score=29.74 Aligned_cols=57 Identities=18% Similarity=0.071 Sum_probs=27.1
Q ss_pred HHHHHHHhHHHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHHhCCcccHHHHhhhHHHHHHH
Q 013937 295 LSGYLVDAIQGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAMKDKLDITIGVAIGSSTQISM 359 (433)
Q Consensus 295 ~a~~lv~si~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~~g~~dlaig~~iGS~i~~~l 359 (433)
.+.++.+.+.. ....+|....+++.-.+..|.-|.. .+.+.|--.=+.+++.-.+.+
T Consensus 232 ~G~~i~~~l~~--~~~~lP~f~~ami~g~ivrn~~~~~------~~~~id~~~i~~I~~~sL~~f 288 (368)
T PF03616_consen 232 LGYIISALLKK--IGLTLPLFVGAMIVGIIVRNILDKT------GKYKIDRKTIDRISGISLDLF 288 (368)
T ss_pred HHHHHHHHHHH--cCcCCchHHHHHHHHHHHHHHHHHh------CcccCCHHHHHHHHHHHHHHH
Confidence 33455555444 3445666555555555554443332 223345444445555444444
No 37
>PF11683 DUF3278: Protein of unknown function (DUF3278); InterPro: IPR021697 This bacterial family of proteins has no known function.
Probab=40.27 E-value=72 Score=27.52 Aligned_cols=9 Identities=22% Similarity=0.670 Sum_probs=4.1
Q ss_pred HHHHHHHHH
Q 013937 241 ASYLFFQLK 249 (433)
Q Consensus 241 ~~yl~f~l~ 249 (433)
..|+.++.+
T Consensus 79 ~~yi~~~~~ 87 (129)
T PF11683_consen 79 SGYITFATR 87 (129)
T ss_pred HHHHHHHHH
Confidence 345544443
No 38
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=35.25 E-value=7.3e+02 Score=28.38 Aligned_cols=114 Identities=14% Similarity=0.175 Sum_probs=61.9
Q ss_pred hhcCCCcchhhhhHHhhhhchhHHHHHHHHH------------------HhCCcccHHHHhhhHHHHHHHHHHHHHHHHh
Q 013937 308 DSWNMPVSFISVILLPIVGNATEHGSAIMFA------------------MKDKLDITIGVAIGSSTQISMFVIPFCVVVG 369 (433)
Q Consensus 308 ~~~gis~~fiGlill~i~ts~pE~~~ai~aa------------------~~g~~dlaig~~iGS~i~~~l~v~pl~vli~ 369 (433)
...+-+..|+-+.-++-.....-.+.++... ....++.|...++|-.+....+.++...+..
T Consensus 532 ~~~~~~~~f~~F~~~a~~~~~~~~l~a~lvfl~tiK~~k~l~f~~t~~~~s~TL~ra~~~I~gf~l~~~I~~~aya~l~~ 611 (798)
T KOG3599|consen 532 FERASPRTFIDFTEVAQWNIAARNLLAFLVFLTTIKLWKVLRFNKTMSQFSSTLSRAWKEIVGFALMFLILFFAYAQLGY 611 (798)
T ss_pred HHhcCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999998888887777755432 1123455666666666654444455444443
Q ss_pred hhcCCcccccchhHH-HHHHHHHHHHH-HHHHhCCccchHHHHHHHHHHHHHHHH
Q 013937 370 WFMGQPMDLNFQLFE-TASLFIAVLVV-AFMLQEGTSNYFKGLMLILGYLIVAAS 422 (433)
Q Consensus 370 ~~~g~~~~l~~~~~~-~~~l~~svl~~-~~~~~~g~~~~~~G~~Ll~~Y~i~~~~ 422 (433)
.+.|..+. ++..+. .+.-.+..+.- ....--...+++-|.+++..|++.+..
T Consensus 612 llfG~~v~-~f~~f~~s~~t~~~~~~G~~~~~~i~~~~r~LG~~~~~~~v~~v~~ 665 (798)
T KOG3599|consen 612 LLFGNQVS-DFRTFVASIVTLLRYILGDFCPAEIFHANRILGPLLFLTYVFVVSF 665 (798)
T ss_pred HHcCCccC-ChHHHHHHHHHHHHHHhccCCccccccCCchHHHHHHHHHHHHHHH
Confidence 34454443 333322 11111111111 000111356788999988888777654
No 39
>PTZ00206 amino acid transporter; Provisional
Probab=31.52 E-value=3.9e+02 Score=28.16 Aligned_cols=21 Identities=14% Similarity=-0.189 Sum_probs=13.9
Q ss_pred hhhhHHHHHHHHHHHHHHhhh
Q 013937 67 FKSKINVLLPFGPLVILLHYV 87 (433)
Q Consensus 67 ~~~~~~~ll~~vP~~~~~~~~ 87 (433)
.++..|++-..+-.|+++-..
T Consensus 63 ~~s~fnL~~~~iGaGILsLP~ 83 (467)
T PTZ00206 63 AASAFNIASSTVGAGIVGLPS 83 (467)
T ss_pred HHHHHHHHHHHHhHHHHHHHH
Confidence 556677777777777766444
No 40
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=30.30 E-value=1.6e+02 Score=31.14 Aligned_cols=28 Identities=7% Similarity=0.019 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013937 94 VFFFSLLGITPLAERLGFATEQLAFYTG 121 (433)
Q Consensus 94 iF~~~~l~ii~la~~l~~~~e~la~~~g 121 (433)
.++.++..++--..-.......+.++++
T Consensus 85 ~~igG~~~vm~~tGA~~~~v~~l~k~l~ 112 (465)
T PF03606_consen 85 MIIGGFFGVMNHTGAIDALVNLLIKPLK 112 (465)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHhc
Confidence 3444555555555555555666666664
No 41
>PF01970 TctA: Tripartite tricarboxylate transporter TctA family; InterPro: IPR002823 Members of this prokaryotic family have no known function. Members are predicted to be integral membrane proteins and are similar to a protein in a tartrate utilisation region (TAR) of Agrobacterium vitis a common pathogen of grapevine. Most grapevine strains utilise tartrate, an abundant compound in grapevine [].
Probab=29.40 E-value=2.7e+02 Score=29.11 Aligned_cols=79 Identities=22% Similarity=0.151 Sum_probs=43.7
Q ss_pred HHHHHHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcccccchhHHHHHHHHHHHHHHHHHhCCccchHHHHHHH
Q 013937 334 AIMFAMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMDLNFQLFETASLFIAVLVVAFMLQEGTSNYFKGLMLI 413 (433)
Q Consensus 334 ai~aa~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~l~~~~~~~~~l~~svl~~~~~~~~g~~~~~~G~~Ll 413 (433)
....++|||..-|++...=++..-.++..++..++++.. .++.+.|...|.+.+.+-.+.......++ +..+|+.-.
T Consensus 79 g~~l~~~G~~~~Al~~a~~~S~~G~~is~~~l~~~a~~l-a~~a~~fg~~e~f~L~~~~l~~i~~~s~~--~~~kgl~a~ 155 (419)
T PF01970_consen 79 GYPLAKKGKAGEALRLAAIGSFIGGLISAILLILFAPPL-APFALKFGPPEYFALALFGLTLIASLSGG--SLLKGLIAG 155 (419)
T ss_pred hHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCcHHHHHHHHHHHHHHHHHcCC--cHHHHHHHH
Confidence 445689999999988666666555555555555554332 24556677777655543333332333332 344555444
Q ss_pred HH
Q 013937 414 LG 415 (433)
Q Consensus 414 ~~ 415 (433)
++
T Consensus 156 ~~ 157 (419)
T PF01970_consen 156 LL 157 (419)
T ss_pred HH
Confidence 33
No 42
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=29.04 E-value=92 Score=30.21 Aligned_cols=51 Identities=16% Similarity=0.284 Sum_probs=41.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCCcchhhhhHHhhh
Q 013937 275 ELTQWEAIAWLAILTIWVSLLSGYLVDAIQGASDSWNMPVSFISVILLPIV 325 (433)
Q Consensus 275 ~~~~~~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~gis~~fiGlill~i~ 325 (433)
+..+.++++.+++++++++.+.-..+.+.+..-+.-|+--.++|++++++.
T Consensus 192 ~faRkR~i~f~llgllfliiaigltvGT~~~A~~~~giY~~wv~~~l~a~~ 242 (256)
T PF09788_consen 192 RFARKRAIIFFLLGLLFLIIAIGLTVGTWTYAKTYGGIYVSWVGLFLIALI 242 (256)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCcEeHHHHHHHHHHHH
Confidence 355678888888888888888888888877777777899999999988875
No 43
>PF05661 DUF808: Protein of unknown function (DUF808); InterPro: IPR008526 This family consists of several bacterial proteins of unknown function.
Probab=28.09 E-value=2.1e+02 Score=28.43 Aligned_cols=76 Identities=14% Similarity=-0.112 Sum_probs=51.5
Q ss_pred CCCccccccccccccccccchhhHHHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013937 40 YPHADMANSRVFKQIRMGPLSSIHTVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFY 119 (433)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~ 119 (433)
.+|.....+....--++|-+--++++-.+|..|=+ +.+|.+++.+.+-+. .+.-+.++-.+++-=+++|++.++
T Consensus 36 ~DDlAvnaq~V~Gv~a~RELPvvw~IakGSl~NKl-IllP~ALllSafaPw-----~itplLmlGG~yLcfEGaEKv~~~ 109 (295)
T PF05661_consen 36 GDDLAVNAQYVTGVRADRELPVVWAIAKGSLRNKL-ILLPAALLLSAFAPW-----AITPLLMLGGAYLCFEGAEKVWHK 109 (295)
T ss_pred ccccccChhhhcCCCccccchHHHHHHHhhhhhhH-HHHHHHHHHHHHHHH-----HHHHHHHHhHHHHHHhHHHHHHHH
Confidence 35555555666666667778888999999999887 578999888665422 222233444455555689999998
Q ss_pred hC
Q 013937 120 TG 121 (433)
Q Consensus 120 ~g 121 (433)
+.
T Consensus 110 ~~ 111 (295)
T PF05661_consen 110 FF 111 (295)
T ss_pred Hc
Confidence 85
No 44
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=27.71 E-value=4.3e+02 Score=23.29 Aligned_cols=28 Identities=14% Similarity=0.030 Sum_probs=14.7
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhh
Q 013937 224 SELALSRFSSCVMLIAYASYLFFQLKSQ 251 (433)
Q Consensus 224 ~~~~lS~~~siiLl~~Y~~yl~f~l~~h 251 (433)
..+......+..|-.+-..|+.|.-|+.
T Consensus 35 ~~Gt~aL~ls~~l~~mig~yl~~~~rr~ 62 (137)
T PF12270_consen 35 WVGTVALVLSGGLALMIGFYLRFTARRI 62 (137)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3344444445555555566766655543
No 45
>PRK10062 hypothetical protein; Provisional
Probab=27.31 E-value=2e+02 Score=28.63 Aligned_cols=76 Identities=14% Similarity=-0.031 Sum_probs=51.0
Q ss_pred CCCccccccccccccccccchhhHHHHhhhhHHHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013937 40 YPHADMANSRVFKQIRMGPLSSIHTVIFKSKINVLLPFGPLVILLHYVTEKHEWVFFFSLLGITPLAERLGFATEQLAFY 119 (433)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~vP~~~~~~~~~~~~~~iF~~~~l~ii~la~~l~~~~e~la~~ 119 (433)
.||.....+....-.++|-+--++++-.+|..|=+ +.+|.+++.+++-+ | .+.-+.++-.+++-=+++|++.++
T Consensus 36 ~DDlAvnaq~V~Gv~a~RELPvvw~IAkGSl~NKl-IlvP~ALllSafaP--w---~itpLLMlGG~yLcfEGaEKv~~~ 109 (303)
T PRK10062 36 GDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKV-ILVPLALIISAFIP--W---AITPLLMIGGAFLCFEGVEKVLHM 109 (303)
T ss_pred ccccccChHhhcCCCccccchhhHHHHHhhHhhhH-HHHHHHHHHHHHHH--H---HHHHHHHHhHHHHHHhhHHHHHHH
Confidence 34555555555555666677788899999999988 67799988866542 2 222333444555555789999998
Q ss_pred hC
Q 013937 120 TG 121 (433)
Q Consensus 120 ~g 121 (433)
+.
T Consensus 110 ~~ 111 (303)
T PRK10062 110 LE 111 (303)
T ss_pred Hc
Confidence 84
No 46
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=26.76 E-value=7.6e+02 Score=25.92 Aligned_cols=69 Identities=12% Similarity=0.115 Sum_probs=48.5
Q ss_pred HHHHhhcCCCcchhhhhHHhhhhchhHHHHHHHHHH-hCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCcc
Q 013937 304 QGASDSWNMPVSFISVILLPIVGNATEHGSAIMFAM-KDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPM 376 (433)
Q Consensus 304 ~~~~~~~gis~~fiGlill~i~ts~pE~~~ai~aa~-~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~ 376 (433)
..-...-|+|+..+|+. -.+ +..-|+..++.+.+ .+|....-+...|.+.|..++.+.+..+ |..+.|.
T Consensus 282 t~yl~~~G~s~~~igi~-R~~-gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~--~~~~~~~ 351 (432)
T PF06963_consen 282 TAYLKSQGYSPSVIGIF-RGL-GAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSF--WAPGSPF 351 (432)
T ss_pred HHHHHHCCCCHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHH--hcCCCCc
Confidence 34444559999999973 333 46777777777654 5677788889999999999877766654 4444443
No 47
>COG0385 Predicted Na+-dependent transporter [General function prediction only]
Probab=25.74 E-value=7e+02 Score=25.16 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=34.9
Q ss_pred CcchhhhhHHhhhhchhHHHHHHHH--HHhCCcccHHHHhhhHHHHHHHHHHHHHHHHhhhcCCccc
Q 013937 313 PVSFISVILLPIVGNATEHGSAIMF--AMKDKLDITIGVAIGSSTQISMFVIPFCVVVGWFMGQPMD 377 (433)
Q Consensus 313 s~~fiGlill~i~ts~pE~~~ai~a--a~~g~~dlaig~~iGS~i~~~l~v~pl~vli~~~~g~~~~ 377 (433)
++..+|++++... |-.+.+... -.||+.-.++....=||+.-. |..|+.+-+ .+|..+.
T Consensus 96 ~~l~~Gl~ll~~~---Pggv~S~~~t~lAkGnValsV~~tsvStll~~-f~tPllv~l--~~~~~v~ 156 (319)
T COG0385 96 PELAVGLLLLGCC---PGGVASNAMTYLAKGNVALSVCSTSVSTLLGP-FLTPLLVGL--LAGGGVP 156 (319)
T ss_pred HHHHHhHHheeeC---CCchhHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHH--HhcCCCC
Confidence 4556788877654 555555444 456665566666666666544 478887644 5554444
No 48
>PRK11588 hypothetical protein; Provisional
Probab=25.54 E-value=8.7e+02 Score=26.18 Aligned_cols=45 Identities=11% Similarity=-0.144 Sum_probs=28.5
Q ss_pred HHHHHHHHhhhcCC-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 013937 77 FGPLVILLHYVTEK-----HEWVFFFSLLGITPLAERLGFATEQLAFYTG 121 (433)
Q Consensus 77 ~vP~~~~~~~~~~~-----~~~iF~~~~l~ii~la~~l~~~~e~la~~~g 121 (433)
.+|-|+.-+....+ -...++.++++++--..-+..+..++.++++
T Consensus 95 ai~~G~~~g~~~~~aa~ii~filiiGG~f~vi~~TGAi~~~i~~l~~k~~ 144 (506)
T PRK11588 95 FPFEGLTSGSKWGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRKTR 144 (506)
T ss_pred HHHHHHhcccccccccceeehhhHHhhHHHHHHHhchHHHHHHHHHHHhC
Confidence 55556554332211 1345667777787777777888888888875
No 49
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=23.25 E-value=8.4e+02 Score=25.20 Aligned_cols=20 Identities=20% Similarity=0.378 Sum_probs=11.9
Q ss_pred CccchHHHHHHHHHHHHHHH
Q 013937 402 GTSNYFKGLMLILGYLIVAA 421 (433)
Q Consensus 402 g~~~~~~G~~Ll~~Y~i~~~ 421 (433)
++.+++.|.+|+..-+...+
T Consensus 238 qprdyl~~~~L~~~~~~~~i 257 (376)
T PF02554_consen 238 QPRDYLNGFLLIGMLIGLVI 257 (376)
T ss_pred CchHHHHHHHHHHHHHHHHH
Confidence 45677777766655444333
No 50
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=22.23 E-value=54 Score=33.54 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=27.1
Q ss_pred CCceeeeecchhHHHHHHHHHHHHHHhhccee
Q 013937 148 GMIRVVQQSLLGSILSNMLLVLGCSFFIGGII 179 (433)
Q Consensus 148 g~~~i~~gsilGS~l~nllLvlG~~~l~gg~~ 179 (433)
+-.++..+++.-|-..-..-++|++|+-..+.
T Consensus 279 ~~~~I~~~sVFkSGM~AvV~VfGVAWmgdTf~ 310 (364)
T PF03605_consen 279 DPKKILSGSVFKSGMVAVVCVFGVAWMGDTFF 310 (364)
T ss_pred CHHHcccchhHHHhHHHHHHHhhHHHHHhhHH
Confidence 45688999999999999999999999876553
No 51
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species.
Probab=22.14 E-value=3.9e+02 Score=27.57 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHhhc-CCCcchhhhhHHhhhhchhHH
Q 013937 280 EAIAWLAILTIWVSLLSGYLVDAIQGASDSW-NMPVSFISVILLPIVGNATEH 331 (433)
Q Consensus 280 ~~i~~l~~~~~~i~~~a~~lv~si~~~~~~~-gis~~fiGlill~i~ts~pE~ 331 (433)
+.+.+.+.....+...+..+.+.+....... +-.-..+-.+.+.++++.|..
T Consensus 206 ~~l~~~la~a~~v~~~s~~la~~l~~~~~~~~~~~~~il~~tt~~l~~~~~~~ 258 (378)
T PF05684_consen 206 QDLAFLLAVAFAVVALSHALAAWLPPLFAGISSSTWLILTVTTLGLATSFPPF 258 (378)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHhccch
Confidence 4444444444555566677777665333322 222233444555666666653
No 52
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=21.03 E-value=1.6e+02 Score=30.92 Aligned_cols=19 Identities=16% Similarity=0.137 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 013937 94 VFFFSLLGITPLAERLGFA 112 (433)
Q Consensus 94 iF~~~~l~ii~la~~l~~~ 112 (433)
.+.....++.=.++.+++.
T Consensus 307 ~~~~i~~~~fNvgD~vGR~ 325 (437)
T TIGR00939 307 FYPIICFLLFNLFDWLGRS 325 (437)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3444444455566666664
No 53
>KOG1304 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=20.54 E-value=3.4e+02 Score=28.75 Aligned_cols=31 Identities=13% Similarity=-0.027 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 013937 92 EWVFFFSLLGITPLAERLGFATEQLAFYTGPT 123 (433)
Q Consensus 92 ~~iF~~~~l~ii~la~~l~~~~e~la~~~g~~ 123 (433)
...++++++.. .+--.+.++...++++.+++
T Consensus 82 ~~~~~i~~l~~-yc~~~LVk~~~~L~~~~~~~ 112 (449)
T KOG1304|consen 82 LLTVFIGFLCT-YCMHLLVKCSHKLCKRFRGP 112 (449)
T ss_pred HHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCc
Confidence 44666666644 57788999999999998754
Done!