Query 013937
Match_columns 433
No_of_seqs 311 out of 2124
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 19:53:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013937.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013937hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2rk5a1 d.145.1.4 (A:5-88) Put 14.2 45 0.0033 23.2 2.4 16 122-137 33-48 (84)
2 d2o1ra1 d.145.1.4 (A:1-78) Hyp 14.0 45 0.0033 23.0 2.3 24 114-137 17-48 (78)
3 d2p3ha1 d.145.1.4 (A:5-102) Un 12.0 56 0.0041 23.7 2.4 16 122-137 36-51 (98)
4 d2r2za1 d.145.1.4 (A:5-88) Put 10.7 68 0.005 22.3 2.4 17 122-138 36-52 (84)
5 d2plia1 d.145.1.4 (A:5-88) Unc 10.2 72 0.0053 22.2 2.4 24 114-137 22-53 (84)
6 d2nqwa1 d.145.1.4 (A:4-90) Hyp 8.2 97 0.0071 21.5 2.5 16 122-137 41-56 (87)
7 d2oara1 f.16.1.1 (A:10-118) Ga 6.8 54 0.0039 24.5 0.3 30 339-368 2-37 (109)
8 d2plsa1 d.145.1.4 (A:345-428) 6.5 76 0.0055 21.9 1.0 16 122-137 38-53 (84)
9 d2p13a1 d.145.1.4 (A:431-515) 6.3 78 0.0057 21.9 1.0 16 122-137 40-55 (85)
10 d2oaia1 d.145.1.4 (A:5-91) Hem 6.2 81 0.0059 22.0 1.1 16 122-137 41-56 (87)
No 1
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=14.20 E-value=45 Score=23.17 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=14.7
Q ss_pred CchhhHHHHhhcchhh
Q 013937 122 PTVGGLLNATFGNATE 137 (433)
Q Consensus 122 ~~vgGll~a~~gn~pE 137 (433)
+|+||+++--+|..|+
T Consensus 33 dTlgG~v~~~lg~iP~ 48 (84)
T d2rk5a1 33 DTIAGFYLTGVGTIPS 48 (84)
T ss_dssp CBHHHHHHHHHCSCCC
T ss_pred hhHHHHHHHHhCcCCC
Confidence 6999999999999985
No 2
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=14.00 E-value=45 Score=22.96 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=19.1
Q ss_pred HHHHHHhC--------CchhhHHHHhhcchhh
Q 013937 114 EQLAFYTG--------PTVGGLLNATFGNATE 137 (433)
Q Consensus 114 e~la~~~g--------~~vgGll~a~~gn~pE 137 (433)
+++.+.+| +|+||+++--+|..|+
T Consensus 17 ~dl~~~l~~~l~~~~~~Ti~G~v~~~lg~iP~ 48 (78)
T d2o1ra1 17 RDLNKMFNWELDTEDARTFNGLILEHLEEIPD 48 (78)
T ss_dssp HHHHHHHCCCCCCSSCSBHHHHHHHHCSSCCC
T ss_pred HHHHHHHCCCCCCccchHHHHHHHHHhCcCCC
Confidence 45556554 6999999999999986
No 3
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=12.02 E-value=56 Score=23.66 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=14.9
Q ss_pred CchhhHHHHhhcchhh
Q 013937 122 PTVGGLLNATFGNATE 137 (433)
Q Consensus 122 ~~vgGll~a~~gn~pE 137 (433)
+|+||+++.-+|..|+
T Consensus 36 ~Tl~G~~~~~lg~iP~ 51 (98)
T d2p3ha1 36 ETISGLLFDHANALLK 51 (98)
T ss_dssp CBHHHHHHHHHCSCCC
T ss_pred cCHHHHHHHHHCcCCC
Confidence 7999999999999996
No 4
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=10.65 E-value=68 Score=22.28 Aligned_cols=17 Identities=24% Similarity=0.432 Sum_probs=14.9
Q ss_pred CchhhHHHHhhcchhhH
Q 013937 122 PTVGGLLNATFGNATEM 138 (433)
Q Consensus 122 ~~vgGll~a~~gn~pEL 138 (433)
+|+||++.--+|..|+.
T Consensus 36 ~TigG~i~~~lg~iP~~ 52 (84)
T d2r2za1 36 DTMAGYLITALGTIPDE 52 (84)
T ss_dssp CBHHHHHHHHHSSCCCT
T ss_pred hhHHHHHHHHhCcCCCC
Confidence 79999999999998863
No 5
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=10.21 E-value=72 Score=22.19 Aligned_cols=24 Identities=29% Similarity=0.582 Sum_probs=18.8
Q ss_pred HHHHHHhC--------CchhhHHHHhhcchhh
Q 013937 114 EQLAFYTG--------PTVGGLLNATFGNATE 137 (433)
Q Consensus 114 e~la~~~g--------~~vgGll~a~~gn~pE 137 (433)
+++.+.+| +|+||+++--+|..|+
T Consensus 22 ~dl~~~~~~~l~~~~~~TigG~i~~~l~~iP~ 53 (84)
T d2plia1 22 EDINTFFGTEYSSEEADTIGGLVIQELGHLPV 53 (84)
T ss_dssp HHHHHHHCCCCCCSSCCBHHHHHHHHHSSCCC
T ss_pred HHHHHHhCCCCCccccHHHHHHHHHHhCcccc
Confidence 45555554 6999999999999886
No 6
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=8.21 E-value=97 Score=21.47 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=14.6
Q ss_pred CchhhHHHHhhcchhh
Q 013937 122 PTVGGLLNATFGNATE 137 (433)
Q Consensus 122 ~~vgGll~a~~gn~pE 137 (433)
+|+||+++--+|..|+
T Consensus 41 ~Ti~G~i~~~lg~iP~ 56 (87)
T d2nqwa1 41 DTLSGLFLEIKQELPH 56 (87)
T ss_dssp SBHHHHHHHHHCSCCC
T ss_pred eeHHHHHHHHhCcccc
Confidence 7999999999999886
No 7
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=6.82 E-value=54 Score=24.48 Aligned_cols=30 Identities=17% Similarity=0.382 Sum_probs=20.5
Q ss_pred HhCCcccHHHHhhhHHHH---HH---HHHHHHHHHH
Q 013937 339 MKDKLDITIGVAIGSSTQ---IS---MFVIPFCVVV 368 (433)
Q Consensus 339 ~~g~~dlaig~~iGS~i~---~~---l~v~pl~vli 368 (433)
|-|-.|+|+|.++|+... ++ -++.|+...+
T Consensus 2 rGNVidLAVgvIiG~AF~~iV~slV~diimPlIg~i 37 (109)
T d2oara1 2 RGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRI 37 (109)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhhc
Confidence 445579999999998752 22 2567777655
No 8
>d2plsa1 d.145.1.4 (A:345-428) Hypothetical protein CT0541 {Chlorobium tepidum [TaxId: 1097]}
Probab=6.50 E-value=76 Score=21.94 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=14.5
Q ss_pred CchhhHHHHhhcchhh
Q 013937 122 PTVGGLLNATFGNATE 137 (433)
Q Consensus 122 ~~vgGll~a~~gn~pE 137 (433)
+|+||+++--+|..|+
T Consensus 38 ~Tl~G~i~~~lg~iP~ 53 (84)
T d2plsa1 38 HTLSGMIMWLLGRLPQ 53 (84)
T ss_dssp CBHHHHHHHHHTSCCC
T ss_pred cCHHHHHHHHhCccCC
Confidence 4999999999999986
No 9
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=6.35 E-value=78 Score=21.95 Aligned_cols=16 Identities=38% Similarity=0.559 Sum_probs=14.5
Q ss_pred CchhhHHHHhhcchhh
Q 013937 122 PTVGGLLNATFGNATE 137 (433)
Q Consensus 122 ~~vgGll~a~~gn~pE 137 (433)
+|+||+++--+|..|+
T Consensus 40 ~TlgG~i~~~lg~iP~ 55 (85)
T d2p13a1 40 STLGGYLLWQFGYIPA 55 (85)
T ss_dssp CBHHHHHHHHHSSCCC
T ss_pred eEHHHHHHHHhCcCCC
Confidence 4999999999999986
No 10
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa [TaxId: 2371]}
Probab=6.24 E-value=81 Score=22.01 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=14.4
Q ss_pred CchhhHHHHhhcchhh
Q 013937 122 PTVGGLLNATFGNATE 137 (433)
Q Consensus 122 ~~vgGll~a~~gn~pE 137 (433)
+|+||+++--+|..|+
T Consensus 41 ~Tl~G~i~~~lg~iP~ 56 (87)
T d2oaia1 41 HTLAGMCISYFGRIPH 56 (87)
T ss_dssp SBHHHHHHHHHSSCCC
T ss_pred ccHHHHHHHHhCcCCC
Confidence 4999999999999986
Done!