BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013939
MASVFIYHVVGDLTVGKPELAEFYETETVEAAIKAIGESTECGIPVWKKKTHVGIIENGE
MRQQRFVGILNSFDIVAFLAKSDCLEDQDKAMKTPVSQVIVPNNSLLKQVDPGTRLIDAL
EMMKQGVRRLLVPKSVVWKGMSKRFSILYNGKWLKNMDASNSSSNNLIANANRPSSSSTT
SVRDKFCCLSREDVIRFLIGCLGALAPLPLSSISSLGVINPNYSSIEASVPAIEATLKAP
GDPSAIAVLEPTSEDQYKIIGEISASKLWKCDYLAAAWALANLSAGQFVMGVEDNVTPRS
FPDYSANSTLRENNTVNGVGSTRPRKFCSRSIGFNPSSPCLAASRSPSFGTGRSMYRGRS
TPLTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVLVGVVGYADILVAVTKQPAALTPA
NRTYEGFATEIQS

High Scoring Gene Products

Symbol, full name Information P value
CBSX6
AT1G65320
protein from Arabidopsis thaliana 1.4e-144
AT5G53750 protein from Arabidopsis thaliana 2.2e-20
CBSX5
AT4G27460
protein from Arabidopsis thaliana 8.5e-19
AT1G15330 protein from Arabidopsis thaliana 1.0e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013939
        (433 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2206265 - symbol:CBSX6 "AT1G65320" species:370...  1413  1.4e-144  1
TAIR|locus:2164027 - symbol:AT5G53750 "AT5G53750" species...   258  2.2e-20   1
TAIR|locus:2123999 - symbol:CBSX5 "AT4G27460" species:370...   184  8.5e-19   2
TAIR|locus:2037853 - symbol:AT1G15330 "AT1G15330" species...   126  1.0e-06   2


>TAIR|locus:2206265 [details] [associations]
            symbol:CBSX6 "AT1G65320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
            SMART:SM00116 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005774 GO:GO:0005773 EMBL:AC004512 EMBL:AK117112
            IPI:IPI00524279 PIR:T02355 RefSeq:NP_176711.1 UniGene:At.35899
            UniGene:At.67954 ProteinModelPortal:Q8GZA4 SMR:Q8GZA4 PaxDb:Q8GZA4
            PRIDE:Q8GZA4 EnsemblPlants:AT1G65320.1 GeneID:842840
            KEGG:ath:AT1G65320 TAIR:At1g65320 eggNOG:NOG311373
            HOGENOM:HOG000238614 InParanoid:Q8GZA4 OMA:KLWKCDY PhylomeDB:Q8GZA4
            ProtClustDB:CLSN2679616 Genevestigator:Q8GZA4 Uniprot:Q8GZA4
        Length = 425

 Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
 Identities = 290/437 (66%), Positives = 330/437 (75%)

Query:     1 MASVFIYHVVGDLTVGKPELAEFYETETVEAAIKAIGESTECGIPVWKKKTHV---GIIE 57
             MASVF+YHVVGDLTVGKPE+ EFYETETVE+AI+AIGESTECGIPVW+K+T     G +E
Sbjct:     1 MASVFLYHVVGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPVWRKRTTPSLPGFVE 60

Query:    58 NGEMRQQRFVGILNSFDIVAFLAKSDCLEDQDKAMKTPVSQVIVPNNSLLKQVDPGTRLI 117
             N EMRQQRFVGILNS DIVAFLAK++CL+++ KAMK PVS+V+ P+N+LLKQVDPGTRLI
Sbjct:    61 NSEMRQQRFVGILNSLDIVAFLAKTECLQEE-KAMKIPVSEVVSPDNTLLKQVDPGTRLI 119

Query:   118 DALEMMKQGVRRLLVPKSVVWKGMSKRFSILYNGKWLKNMDXXXXXXXXXXXXXXRPSSS 177
             DALEMMKQGVRRLLVPKSVVW+GMSKRFSILYNGKWLKN +              RP++S
Sbjct:   120 DALEMMKQGVRRLLVPKSVVWRGMSKRFSILYNGKWLKNSENSSSSSGLSADSTNRPTTS 179

Query:   178 STTSVRDKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXGVINPNYSSIEASVPAIEATL 237
              T+S RDKFCCLSREDVIRF                   G+IN NY+ IEAS+PAIEAT 
Sbjct:   180 MTSS-RDKFCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQNYNFIEASLPAIEATR 238

Query:   238 KAPGDPSAIAVLEPT-SEDQYKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVMGVEDNV 296
             +   DPSAIAVLE T +E Q+KIIGEISASKLWKCDY            GQFVMGVEDN+
Sbjct:   239 RPLCDPSAIAVLEQTENEQQFKIIGEISASKLWKCDYLAAAWALANLYAGQFVMGVEDNM 298

Query:   297 TPRSFPDYSANSTLRENNTVNGVGSTRPRKFCSRSIGFNPSSPCLAASRSPSFGTGRSMY 356
             + RSF D+   S        NG  +T  +KF SRSIGFNP+SP    +R      GRSMY
Sbjct:   299 SSRSFSDFLQTSF--PGGEQNGT-ATNAKKFSSRSIGFNPTSP----TR---LSIGRSMY 348

Query:   357 RGRSTPLTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVLVGVVGYADILVAVTKQPAA 416
             RGRS PLTCK +SSLAAVMAQMLSHRATHVWVTE +SDDVLVGVVGY +IL AVTKQP+A
Sbjct:   349 RGRSAPLTCKTSSSLAAVMAQMLSHRATHVWVTEADSDDVLVGVVGYGEILTAVTKQPSA 408

Query:   417 LTPANRTYEGFATEIQS 433
               P+NR+YEGF  E QS
Sbjct:   409 FVPSNRSYEGFGNENQS 425


>TAIR|locus:2164027 [details] [associations]
            symbol:AT5G53750 "AT5G53750" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009611
            "response to wounding" evidence=IEP;RCA] [GO:0009620 "response to
            fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
            process" evidence=RCA] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=RCA] InterPro:IPR000644 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 EMBL:CP002688 GO:GO:0009611
            IPI:IPI00537928 RefSeq:NP_200186.2 UniGene:At.29535
            ProteinModelPortal:F4JXB6 SMR:F4JXB6 EnsemblPlants:AT5G53750.1
            GeneID:835456 KEGG:ath:AT5G53750 OMA:PPEHILR Uniprot:F4JXB6
        Length = 408

 Score = 258 (95.9 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 110/422 (26%), Positives = 179/422 (42%)

Query:     1 MASVFIYHVVGDLTVGKPELAEF-YETETVEAAIKAIGESTECGIPVWKKKTHVGIIENG 59
             MA   + H + DL +GKP L      T TV  AI A+  S E  + VW         +N 
Sbjct:     1 MALTLLSHELSDLCIGKPPLRCLSVATATVADAIAALKSSDEPFLTVWSCNHDEKTDDND 60

Query:    60 EMRQQRFVGILNSFDIVAFLAKSDC-LEDQDKAMKTPVSQVIVPNNSLLKQVDPGTRLID 118
             +      +G +   D++ +L+K D  +     A    VS ++  + +L+  V     LI+
Sbjct:    61 KCE---CLGKICMADVICYLSKFDNNVLSLSSAFDASVSVLLPKSRALVVHVQSSCSLIE 117

Query:   119 ALEMMKQGVRRLLVPKSVVWKGMSKRFSILYNGKWLKNMDXXXXXXXXXXXXXXRPSSSS 178
             A++++ +G + L+VP  +  K ++KR       K LK                   +++S
Sbjct:   118 AIDLIIKGAQNLIVP--IHTKSITKRRQ---QQKLLKR-----------NVVVSLTNATS 161

Query:   179 TTSVRDK-FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXGVINPNYSSI-----EASVPA 232
             TT    + FC +++ED+IRF                   GVIN  ++ +      ++  A
Sbjct:   162 TTHKNSREFCWITQEDIIRFLLDSISVFSPLPSLSISDLGVINSTHTILAVDYYSSAASA 221

Query:   233 IEATLKAPGDPSAIAVLEP--TSEDQYKI-IGEISASKLWKCDYXXXXXXXXXXXXGQFV 289
             + A  +A  D  ++AV+      ED   + IGEIS   L  CD             G  +
Sbjct:   222 VSAISRAILDNVSVAVVGKGCDQEDPCMVLIGEISPMTLACCD-ETAVAAVATLSAGDLM 280

Query:   290 MGVEDNVTPRSFPDYSANSTLRENNTVNGVGSTRPRKFCSRSIGFNPSSPCLAASRSPSF 349
               ++ +  P S      N  L +   V G+ S       S     +  SP      + S+
Sbjct:   281 SYIDGSGPPESLVGVVRNR-LEDKGMV-GLISLIDSLSLSSGSSSDEESPAGKTRMTSSY 338

Query:   350 GTGRS----MYRGRSTPLTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVLVGVVGYAD 405
             G   S    M R +S  + C   SSL AVM Q ++HR ++VWV ++  D  L+G+V + D
Sbjct:   339 GRSVSSAARMAR-KSVAIVCNRKSSLMAVMIQAIAHRVSYVWVIDE--DGCLIGMVTFVD 395

Query:   406 IL 407
             IL
Sbjct:   396 IL 397


>TAIR|locus:2123999 [details] [associations]
            symbol:CBSX5 "AT4G27460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000644 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161571 EMBL:AL078467 EMBL:BT002893
            EMBL:BT020485 EMBL:BT026427 IPI:IPI00552020 PIR:T08938
            RefSeq:NP_194476.2 UniGene:At.32101 ProteinModelPortal:Q84WQ5
            SMR:Q84WQ5 IntAct:Q84WQ5 EnsemblPlants:AT4G27460.1 GeneID:828855
            KEGG:ath:AT4G27460 TAIR:At4g27460 eggNOG:NOG263557
            HOGENOM:HOG000239294 InParanoid:Q5HZ39 OMA:KSEAIVC PhylomeDB:Q84WQ5
            ProtClustDB:CLSN2680116 Genevestigator:Q84WQ5 Uniprot:Q84WQ5
        Length = 391

 Score = 184 (69.8 bits), Expect = 8.5e-19, Sum P(2) = 8.5e-19
 Identities = 62/245 (25%), Positives = 101/245 (41%)

Query:   176 SSSTTSVRDKFCCLSREDVIRFXXXXXXXXXXXXXXXXXXXGVINPNYSSI----EASVP 231
             +++T S   +FC +++ED+I+F                   GVIN  ++ +     +S  
Sbjct:   146 TTTTHSNGQRFCWITQEDIIQFLLGFIAAFSPLPAMSLSDLGVINSTHTVVAVDYHSSAS 205

Query:   232 AI-EATLKAPGDPSAIAVLEPTSEDQY-KIIGEISASKLWKCDYXXXXXXXXXXXXGQFV 289
             A+  A   A    +++AV++   +D +  +IGEIS   L  CD             G  +
Sbjct:   206 AVVSAVSNALAVQTSVAVVDGEGDDPFTSLIGEISPMTLTCCD-ETAAAAVATLSAGDLM 264

Query:   290 MGVEDNVTPRSFPDYSANSTLRENNTVNGVGSTRPRKFCSRSIGFNPS--SPCLAASRSP 347
               ++    P S      N  L +   +  +         S S G++    +P    S   
Sbjct:   265 AYIDGANPPESLVQIVRNR-LEDKGLIGLMSLFDSLSSYSTSSGYSSEEEAPVRTTSYGR 323

Query:   348 SFGTGRSMYRGRSTPLTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVLVGVVGYADIL 407
             S  +   M R +S  + C   SSL AVM Q ++HR  + WV E   D   VG+V + DIL
Sbjct:   324 SMSSSARMAR-KSEAIVCNPKSSLMAVMIQAVAHRVNYAWVVE--KDGCFVGMVTFVDIL 380

Query:   408 VAVTK 412
                 K
Sbjct:   381 KVFRK 385

 Score = 108 (43.1 bits), Expect = 8.5e-19, Sum P(2) = 8.5e-19
 Identities = 34/134 (25%), Positives = 66/134 (49%)

Query:     1 MASVFIYHVVGDLTVGKPELAEFYETET-VEAAIKAIGESTECGIPVWKKKTHVGIIENG 59
             MA   + + V DL +GKP L     + + V  AI A+  S +  + VW    H    ++ 
Sbjct:     1 MALSLLSYNVSDLCLGKPPLRCLSSSSSSVSDAIAALKSSEDTFLSVWNCN-H----DDD 55

Query:    60 EMRQQRFVGILNSFDIVAFLAKSDCLEDQDKAMKTPVSQVIVPNNSLLKQVDPGTRLIDA 119
                +   +G ++  D++  L+K    +    A+ + VS ++    S++  V P   LI+A
Sbjct:    56 NNTECECLGKISMADVICHLSKDH--DHSLCALNSSVSVLLPKTRSIVLHVQPSCSLIEA 113

Query:   120 LEMMKQGVRRLLVP 133
             ++++ +G + L+VP
Sbjct:   114 IDLIIKGAQNLIVP 127

 Score = 48 (22.0 bits), Expect = 0.00080, Sum P(2) = 0.00080
 Identities = 29/125 (23%), Positives = 52/125 (41%)

Query:   289 VMGVEDNVTPRSFPDYSANSTLRENNTVNGVGSTRPRKFCSRS--------IGFNPS-SP 339
             + G ++ + P     Y+      +N +V     +  ++FC  +        +GF  + SP
Sbjct:   118 IKGAQNLIVPIHTKPYTKKKQHNDNVSVTTTTHSNGQRFCWITQEDIIQFLLGFIAAFSP 177

Query:   340 CLAASRSPSFGTGRSMYRGRSTPLTCKITSSLAAVMAQMLSHRA--THVWVTEDESDDVL 397
               A S S   G   S +    T +     SS +AV++ + +  A  T V V + E DD  
Sbjct:   178 LPAMSLS-DLGVINSTH----TVVAVDYHSSASAVVSAVSNALAVQTSVAVVDGEGDDPF 232

Query:   398 VGVVG 402
               ++G
Sbjct:   233 TSLIG 237


>TAIR|locus:2037853 [details] [associations]
            symbol:AT1G15330 "AT1G15330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0003006 "developmental process
            involved in reproduction" evidence=IMP] [GO:0009553 "embryo sac
            development" evidence=IMP] [GO:0009555 "pollen development"
            evidence=IMP] [GO:0010183 "pollen tube guidance" evidence=IMP]
            [GO:0048443 "stamen development" evidence=IMP] InterPro:IPR000644
            Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 EMBL:CP002684
            GO:GO:0009555 GO:GO:0048443 EMBL:AC007591 GO:GO:0009553
            GO:GO:0010183 EMBL:BT023415 EMBL:AK229160 EMBL:BT026513
            IPI:IPI00545829 PIR:F86287 RefSeq:NP_172985.1 UniGene:At.11420
            ProteinModelPortal:Q9XI37 SMR:Q9XI37 PaxDb:Q9XI37 PRIDE:Q9XI37
            ProMEX:Q9XI37 GeneID:838102 KEGG:ath:AT1G15330 TAIR:At1g15330
            eggNOG:NOG272438 HOGENOM:HOG000238797 InParanoid:Q9XI37 OMA:VRKHYIG
            PhylomeDB:Q9XI37 ProtClustDB:CLSN2679465 Genevestigator:Q9XI37
            Uniprot:Q9XI37
        Length = 352

 Score = 126 (49.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 39/134 (29%), Positives = 67/134 (50%)

Query:    12 DLTVGKPELAEFYETETVEAAIKAIGESTECGIPVWKKKTH-VG-----IIENGEMR--- 62
             DLTV    L E   T T+  A+  +  ++   +PV     H +G     I+E+ +     
Sbjct:    20 DLTVRNRRLVEVPYTATLSHAMNTLVANSISALPVAAPPGHWIGAGGSMIMESDKQTGVV 79

Query:    63 QQRFVGILNSFDIVAFLAKSDC-LEDQDKAMKTPVSQVI--VPNNSLLKQVDPGTRLIDA 119
             ++ ++GIL   DI+A +A  D  L D D+ M + VS +I        L  ++P T +++ 
Sbjct:    80 RKHYIGILTMLDILAHIAGEDSNLSDLDRKMSSQVSSIIGHCLEGLSLWTLNPNTSVLEC 139

Query:   120 LEMMKQGVRRLLVP 133
             +E+  +G+ R LVP
Sbjct:   140 MEVFSKGIHRALVP 153

 Score = 55 (24.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 11/45 (24%), Positives = 25/45 (55%)

Query:   363 LTCKITSSLAAVMAQMLSHRATHVWVTEDESDDVLVGVVGYADIL 407
             ++C + S++   + ++++     VWV + +   +L GVV   DI+
Sbjct:   302 VSCGVESTMEEAIEKVVTRGVHRVWVMDQQG--LLQGVVSLTDII 344


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      433       388   0.00093  117 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  241 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.36u 0.09s 30.45t   Elapsed:  00:00:02
  Total cpu time:  30.36u 0.09s 30.45t   Elapsed:  00:00:02
  Start:  Tue May 21 00:21:47 2013   End:  Tue May 21 00:21:49 2013

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