Query 013940
Match_columns 433
No_of_seqs 207 out of 1247
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 19:56:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yeq_A Apased, PHOD, alkaline 100.0 1.1E-42 3.6E-47 369.4 27.9 296 26-349 100-479 (527)
2 1xzw_A Purple acid phosphatase 99.8 9.5E-20 3.2E-24 187.6 18.7 277 26-348 111-422 (426)
3 2qfp_A Purple acid phosphatase 99.8 2E-19 7E-24 184.8 20.0 279 27-352 105-419 (424)
4 1ute_A Protein (II purple acid 99.8 2.6E-18 9.1E-23 166.3 17.8 269 39-348 5-303 (313)
5 3tgh_A Glideosome-associated p 99.8 6.9E-18 2.4E-22 170.0 20.6 261 40-348 3-307 (342)
6 3ib7_A ICC protein; metallopho 99.3 1.5E-11 5E-16 120.4 14.3 243 33-336 18-279 (330)
7 2nxf_A Putative dimetal phosph 99.3 3.4E-11 1.1E-15 116.5 13.1 195 39-251 4-273 (322)
8 2xmo_A LMO2642 protein; phosph 99.2 3.9E-10 1.3E-14 115.8 16.8 108 149-268 191-306 (443)
9 3d03_A Phosphohydrolase; glyce 99.1 4.5E-09 1.5E-13 99.7 20.2 186 41-252 1-204 (274)
10 2q8u_A Exonuclease, putative; 96.6 0.014 4.8E-07 57.3 11.8 240 39-345 17-289 (336)
11 1uf3_A Hypothetical protein TT 96.1 0.064 2.2E-06 48.4 12.3 56 174-245 135-190 (228)
12 2yvt_A Hypothetical protein AQ 95.8 0.021 7.1E-07 53.2 7.7 39 40-78 5-45 (260)
13 3tho_B Exonuclease, putative; 93.8 0.6 2E-05 46.7 12.8 148 148-352 125-281 (379)
14 3ck2_A Conserved uncharacteriz 91.3 0.57 2E-05 41.2 7.9 80 223-347 95-174 (176)
15 1z2w_A Vacuolar protein sortin 88.0 4.8 0.00017 35.6 11.5 36 41-76 11-51 (192)
16 2a22_A Vacuolar protein sortin 85.3 7.8 0.00027 35.1 11.4 37 40-76 25-66 (215)
17 1nnw_A Hypothetical protein; s 83.4 0.93 3.2E-05 41.8 4.3 72 169-252 109-184 (252)
18 2z1a_A 5'-nucleotidase; metal- 75.7 34 0.0012 35.6 13.8 85 136-249 155-244 (552)
19 1xm7_A Hypothetical protein AQ 74.6 5 0.00017 35.5 6.1 53 187-253 105-157 (195)
20 3rqz_A Metallophosphoesterase; 72.3 1.8 6.1E-05 40.1 2.6 36 40-77 3-40 (246)
21 3qfm_A SAPH, putative uncharac 68.5 3 0.0001 39.5 3.2 37 39-77 10-50 (270)
22 1s3l_A Hypothetical protein MJ 66.5 3.7 0.00013 36.7 3.3 35 40-76 25-63 (190)
23 2kkn_A Uncharacterized protein 65.7 2.7 9.3E-05 37.2 2.2 46 28-77 13-62 (178)
24 3ck2_A Conserved uncharacteriz 58.4 9.2 0.00031 33.2 4.3 35 41-77 7-44 (176)
25 3rqz_A Metallophosphoesterase; 51.9 11 0.00039 34.5 4.0 68 168-251 91-158 (246)
26 1su1_A Hypothetical protein YF 49.8 8.9 0.0003 34.5 2.8 36 41-78 26-65 (208)
27 2a22_A Vacuolar protein sortin 48.4 17 0.00057 32.8 4.4 27 223-251 131-157 (215)
28 1nnw_A Hypothetical protein; s 47.0 11 0.00037 34.4 2.9 37 41-77 2-45 (252)
29 3qfm_A SAPH, putative uncharac 45.0 11 0.00038 35.5 2.8 28 222-251 153-180 (270)
30 2zxe_G FXYD10, phospholemman-l 44.4 11 0.00037 28.9 2.0 15 401-415 22-36 (74)
31 2jp3_A FXYD domain-containing 42.7 11 0.00038 28.4 1.8 15 401-415 20-34 (67)
32 3av0_A DNA double-strand break 42.6 23 0.00078 34.9 4.8 39 39-77 19-72 (386)
33 2jo1_A Phospholemman; FXYD1, N 41.6 12 0.00039 28.6 1.8 16 400-415 18-33 (72)
34 1g5b_A Serine/threonine protei 36.5 27 0.00092 31.3 3.8 36 40-77 12-52 (221)
35 4fbk_A DNA repair and telomere 35.8 34 0.0012 35.3 4.8 38 310-351 344-382 (472)
36 1z2w_A Vacuolar protein sortin 35.4 19 0.00065 31.6 2.6 81 223-345 107-187 (192)
37 3t1i_A Double-strand break rep 34.3 34 0.0012 34.8 4.6 39 310-352 300-339 (431)
38 1xm7_A Hypothetical protein AQ 34.2 36 0.0012 29.7 4.2 38 41-78 2-56 (195)
39 1ii7_A MRE11 nuclease; RAD50, 33.0 40 0.0014 32.2 4.7 38 41-78 1-53 (333)
40 4fbw_A DNA repair protein RAD3 32.5 42 0.0014 34.0 4.8 37 310-350 281-318 (417)
41 4fbw_A DNA repair protein RAD3 29.5 1.3E+02 0.0045 30.3 7.9 40 37-76 10-63 (417)
42 4fbk_A DNA repair and telomere 29.1 2.6E+02 0.0087 28.7 10.1 42 36-77 72-127 (472)
43 2qjc_A Diadenosine tetraphosph 27.4 48 0.0016 30.8 4.0 35 41-77 19-58 (262)
44 3t1i_A Double-strand break rep 25.0 2.5E+02 0.0084 28.4 9.0 42 37-78 29-84 (431)
45 3rl5_A Metallophosphoesterase 24.7 62 0.0021 31.1 4.3 35 39-78 58-92 (296)
46 1hp1_A 5'-nucleotidase; metall 24.5 49 0.0017 33.9 3.7 98 136-249 129-233 (516)
47 3b8e_G Na+/K+ ATPase gamma sub 20.4 6.7 0.00023 24.8 -2.3 8 424-431 22-29 (29)
No 1
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-42 Score=369.41 Aligned_cols=296 Identities=17% Similarity=0.241 Sum_probs=224.5
Q ss_pred cCCCCCCCCCCC--CcccEEEEEeeCCCC-CChhHHHHHhhcCCcEEEEeccccccCCCCCccc-cCcccccCCCCCCCC
Q 013940 26 GGGNDSTKANHE--ALVSRIAFGSCANQT-APQPIWDAIIKFDPQVFIWMGDNIYGDIKRPSKM-FGKERTIGPWKNVPR 101 (433)
Q Consensus 26 ~~~~t~T~p~~~--~~~~riAfgSC~~~~-~~~~i~~~Ia~~~pD~~i~lGD~IY~D~~~~~~~-~g~~r~~~~w~~~p~ 101 (433)
..|++||+|+.+ ...+||||+||+++. +++++|++|++.+|||+||+||+||+|+...... .+.. ++.+.
T Consensus 100 ~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~------R~~~~ 173 (527)
T 2yeq_A 100 PVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNV------RTHNS 173 (527)
T ss_dssp CCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCC------SCCSS
T ss_pred CCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCccccccccc------ccCCc
Confidence 458999999864 358999999999985 8899999999999999999999999998653211 0111 22344
Q ss_pred CCCCCHHHHHHHHHHhcCChhHHHHHhhh-------------c--C----------------------------------
Q 013940 102 FVPTSQDEMNFKYHIIKNHPAYSRLRHNL-------------N--T---------------------------------- 132 (433)
Q Consensus 102 ~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~-------------N--~---------------------------------- 132 (433)
.+..++++||.+|+++++||++|++++++ | .
T Consensus 174 ~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~ 253 (527)
T 2yeq_A 174 AEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSL 253 (527)
T ss_dssp SSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGC
T ss_pred ccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccC
Confidence 56789999999999999999999998866 1 0
Q ss_pred ----CCccEEEEEeCCCCCeeEEEEEeCCCCCCCC--------------CCCCCCCcHHHHHHHHHHhcCCCCCeEEEEe
Q 013940 133 ----KAGIYTSYTFGPVGRQIKIILLDTRYHRDPL--------------SSDGTILGSTQWTWLEKELNGPSSAITIIVS 194 (433)
Q Consensus 133 ----~~giY~sf~~G~~g~~v~~~~LDtR~~R~~~--------------~~~~~mLG~~Q~~WL~~~L~~s~a~wkIv~s 194 (433)
..++||+|++|++ ++|||||||+||+++ .+.++|||++|++||+++|++|+++||||++
T Consensus 254 p~~~~~~~y~sf~~G~l---v~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s~a~W~Iv~s 330 (527)
T 2yeq_A 254 PNGPDMQLYRHFTYGNL---ASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSSTAHWNVLAQ 330 (527)
T ss_dssp CBTTBCCCCEEEEETTT---EEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHCCSSEEEEEC
T ss_pred CCCCCceEEEEEEcCCc---ceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcCCCCeEEEEe
Confidence 1257999999985 999999999999875 3467999999999999999999999999999
Q ss_pred cceeecCCcC-CCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccceeEeeccC-----CCcceEEEecCCC
Q 013940 195 SIQVISNLSA-TTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCD-----VGYALYDITSSGL 268 (433)
Q Consensus 195 ~vpv~~~~~~-~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~-----~~~~l~eiTSSgl 268 (433)
|+||.+.... +.+...+.|+|++|+.+|++|+++|++++++|+|+||||+|.+++.++... .....+|+++|++
T Consensus 331 ~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi 410 (527)
T 2yeq_A 331 QIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSI 410 (527)
T ss_dssp SSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCS
T ss_pred CCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCe
Confidence 9999764211 111223679999999999999999999999999999999999999887532 1234899999999
Q ss_pred ccccccc-CCCCchhhHhhhhccCCCceeeccccccccccCCCCCCEEEEEEecCCCceEEEEEEEc------CCCCeEE
Q 013940 269 TQAVEKA-VPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVRD------TDGIPAI 341 (433)
Q Consensus 269 t~~~~~~-~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~nFg~ieid~~~~~~~l~~~i~d------~~G~~l~ 341 (433)
++..... .+.... .+...+|+.++. ...+||+.|+|+.+ +++++++. .++.+..
T Consensus 411 ~s~~~g~~~~~~~~------------~~~~~np~~~~~---~~~~Gy~~v~vt~~----~~~~~~~~v~~v~~~~~~~~~ 471 (527)
T 2yeq_A 411 TSGGNGADKRADTD------------QILKENPHIQFF---NDYRGYVRCTVTPH----QWKADYRVMPFVTEPGAAIST 471 (527)
T ss_dssp STTCSCBSBCTTHH------------HHHHHCTTEEEE---EBCEEEEEEEEETT----EEEEEEEEESCSSSSCCCCEE
T ss_pred eCCCCcccchhhhh------------hhhhcCCcceee---eCCCCEEEEEEecc----EEEEEEEEeCCccCCCCccee
Confidence 8753211 110000 011134554542 25889999999987 56666543 3455555
Q ss_pred EEEeecCC
Q 013940 342 GVNISLSE 349 (433)
Q Consensus 342 ~~ti~~~~ 349 (433)
..++....
T Consensus 472 ~~~~~~~~ 479 (527)
T 2yeq_A 472 RASFVYQK 479 (527)
T ss_dssp EEEEEECS
T ss_pred eeEEEEeC
Confidence 66665544
No 2
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.83 E-value=9.5e-20 Score=187.55 Aligned_cols=277 Identities=14% Similarity=0.077 Sum_probs=164.7
Q ss_pred cCCCCCCCCCC-CCcccEEEEEeeCCCC-CChhHHHHHhhc--CCcEEEEeccccccCCCCCc--cccCc-ccccCCC-C
Q 013940 26 GGGNDSTKANH-EALVSRIAFGSCANQT-APQPIWDAIIKF--DPQVFIWMGDNIYGDIKRPS--KMFGK-ERTIGPW-K 97 (433)
Q Consensus 26 ~~~~t~T~p~~-~~~~~riAfgSC~~~~-~~~~i~~~Ia~~--~pD~~i~lGD~IY~D~~~~~--~~~g~-~r~~~~w-~ 97 (433)
..++.+|+|.+ ....+||++.||.+.. ....++++|++. +||++||+||++|+++.... ..... .+...+. .
T Consensus 111 ~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~ 190 (426)
T 1xzw_A 111 RQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVA 190 (426)
T ss_dssp EEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHT
T ss_pred ceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHh
Confidence 34677899874 3468999999999764 234677788876 99999999999998764210 00000 0000000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCChhHHHHHhhhc-------CCCccEEEEEeCCCCCeeEEEEEeCCCCCCCCCCCCCCC
Q 013940 98 NVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLN-------TKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTIL 170 (433)
Q Consensus 98 ~~p~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~N-------~~~giY~sf~~G~~g~~v~~~~LDtR~~R~~~~~~~~mL 170 (433)
..|.....+.||+...-. ......+....+..+ .....||+|++|+ ++|++||++..-. +
T Consensus 191 ~~P~~~v~GNHD~~~~~~-~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~----~~~i~Ldt~~~~~--------~ 257 (426)
T 1xzw_A 191 YQPWIWTAGNHEIDYAPD-IGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRAS----AHIIVLSSYSGFV--------K 257 (426)
T ss_dssp TSCEECCCCGGGCCCBGG-GTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETT----EEEEECCTTSCCS--------T
T ss_pred cCCEEEeccccccccCCc-cccccCChhheEEEeCCcccCCCCCCCeEEEEECC----EEEEEeeCcccCC--------C
Confidence 123333444554421000 000011222222211 2345799999997 9999999984311 3
Q ss_pred cHHHHHHHHHHhcC---CCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 013940 171 GSTQWTWLEKELNG---PSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFG 247 (433)
Q Consensus 171 G~~Q~~WL~~~L~~---s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~ 247 (433)
|++|++||++.|++ ++++|+||++|+|+++... ..|..-...|++|.++|++++++ ++|+||+|..
T Consensus 258 ~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~---------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~~ 326 (426)
T 1xzw_A 258 YSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYE---------AHYMEGEAMRAIFEPYFVYYKVD--IVFSGHVHSY 326 (426)
T ss_dssp TSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBS---------TTTTTTHHHHHHHHHHHHHTTCS--EEEECSSSSE
T ss_pred CHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCC---------cccCCCHHHHHHHHHHHHHhCCC--EEEEcChhhh
Confidence 78999999999986 5678999999999865311 11222245699999999999987 8899999999
Q ss_pred eeEeeccC--------------CCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccccccccCCCCCC
Q 013940 248 EITRYDCD--------------VGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPN 313 (433)
Q Consensus 248 ~~~~~~~~--------------~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~n 313 (433)
+....-.+ ..-....|++|+.+.... ..+....+ .|... .+ .....|
T Consensus 327 ~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~-~~~~~~~~--------~p~~s-------~~---~~~~~G 387 (426)
T 1xzw_A 327 ERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEG-LASEMTQP--------QPSYS-------AF---REASFG 387 (426)
T ss_dssp EEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTC-CCCCBCSS--------CCTTE-------EE---EECCCE
T ss_pred eeeeeecCccccccCCccccccCCCccEEEEeCCCccccc-cccccCCC--------CCCce-------eE---EecCCC
Confidence 87641100 011234555554433211 00010000 11110 01 123568
Q ss_pred EEEEEEecCCCceEEEEEEE-cCCCC--eEEEEEeecC
Q 013940 314 FGAIEIDWDATPVALKIEVR-DTDGI--PAIGVNISLS 348 (433)
Q Consensus 314 Fg~ieid~~~~~~~l~~~i~-d~~G~--~l~~~ti~~~ 348 (433)
|+.|+|..+. .+.++++ +.+|+ +..+.+|...
T Consensus 388 ~~~l~v~n~t---~~~~~~~~~~dg~~~~~D~~~i~~~ 422 (426)
T 1xzw_A 388 HGIFDIKNRT---HAHFSWHRNQDGASVEADSLWLLNR 422 (426)
T ss_dssp EEEEEECSSS---EEEEEEEETTSCTTCCSEEEEEECS
T ss_pred eEEEEEEcCC---eEEEEEEECCCCCEEEeEEEEEEec
Confidence 9999996442 6788887 77888 6788887654
No 3
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.82 E-value=2e-19 Score=184.81 Aligned_cols=279 Identities=14% Similarity=0.109 Sum_probs=166.7
Q ss_pred CCCCCCCCCCC-CcccEEEEEeeCCCC-CChhHHHHHhhc--CCcEEEEeccccccCCCCCcc--ccCc-ccccCCC-CC
Q 013940 27 GGNDSTKANHE-ALVSRIAFGSCANQT-APQPIWDAIIKF--DPQVFIWMGDNIYGDIKRPSK--MFGK-ERTIGPW-KN 98 (433)
Q Consensus 27 ~~~t~T~p~~~-~~~~riAfgSC~~~~-~~~~i~~~Ia~~--~pD~~i~lGD~IY~D~~~~~~--~~g~-~r~~~~w-~~ 98 (433)
.++.+|+|++. ...+||++.||.+.. +...++++|++. +||++||+||++|+++..... .... .+..... ..
T Consensus 105 ~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~ 184 (424)
T 2qfp_A 105 RFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY 184 (424)
T ss_dssp EEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhc
Confidence 35678888753 468999999999874 334567778775 899999999999987531100 0000 0000000 02
Q ss_pred CCCCCCCCHHHHHHHHHHhcCChhHHHHHhhhc-------CCCccEEEEEeCCCCCeeEEEEEeCCCCCCCCCCCCCCCc
Q 013940 99 VPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLN-------TKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILG 171 (433)
Q Consensus 99 ~p~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~N-------~~~giY~sf~~G~~g~~v~~~~LDtR~~R~~~~~~~~mLG 171 (433)
.|.....+.||+...- .......+.+..+..+ .....||+|++|. ++|++||++..- . .+
T Consensus 185 ~P~~~v~GNHD~~~~~-~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~----~~~i~Ldt~~~~-------~-~~ 251 (424)
T 2qfp_A 185 QPWIWTAGNHEIEFAP-EINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRAS----AHIIVLSSYSAY-------G-RG 251 (424)
T ss_dssp SCEEECCCHHHHCCBG-GGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETT----EEEEECCTTSCC-------S-TT
T ss_pred CCeEeecCCcccccCC-cccccccchhhhhhccCCccccCCCCCcEEEEEECC----EEEEEecCCccC-------C-Cc
Confidence 3444556777764100 0000001222222111 2346799999996 999999998421 1 34
Q ss_pred HHHHHHHHHHhcC---CCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccce
Q 013940 172 STQWTWLEKELNG---PSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGE 248 (433)
Q Consensus 172 ~~Q~~WL~~~L~~---s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~ 248 (433)
.+|++||++.|++ ++++|+||++|.|+++.. ...|......|++|.++|++++++ ++|+||+|..+
T Consensus 252 ~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~---------~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~y~ 320 (424)
T 2qfp_A 252 TPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSY---------NHHFMEGEAMRTKFEAWFVKYKVD--VVFAGHVHAYE 320 (424)
T ss_dssp SHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCB---------STTTTTTHHHHHHHHHHHHHTTCS--EEEECSSSSEE
T ss_pred HHHHHHHHHHHhhhcccCCCEEEEEeCcCceecC---------cccccccHHHHHHHHHHHHHhCCc--EEEECChhhhh
Confidence 6999999999987 346799999999986531 123543356689999999999987 88999999988
Q ss_pred eEeecc--------C-------CCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccccccccCCCCCC
Q 013940 249 ITRYDC--------D-------VGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPN 313 (433)
Q Consensus 249 ~~~~~~--------~-------~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~n 313 (433)
....-. + ...+ ..|++|+.+... ...+....+ .|... .+ .....|
T Consensus 321 r~~~~~~~~~~~~~g~~~~~~~~~~~-vyi~~G~gg~~~-~~~~~~~~~--------~p~~s-------~~---~~~~~G 380 (424)
T 2qfp_A 321 RSERVSNIAYKITNGLCTPVKDQSAP-VYITIGDAGNYG-VIDSNMIQP--------QPEYS-------AF---REASFG 380 (424)
T ss_dssp EECSEECCCCCSSSCCCSCEECTTSC-EEEEECCSCTTS-CCCCCBCSS--------CCTTE-------EE---EECCCE
T ss_pred eeccccCcceeccCCccccccCCCCc-EEEEecCCCCcc-ccCccCCCC--------CCCcc-------eE---EecCCC
Confidence 663110 0 0123 355655443321 110110000 12110 01 123568
Q ss_pred EEEEEEecCCCceEEEEEEE-cCCCCeE--EEEEeecCCccc
Q 013940 314 FGAIEIDWDATPVALKIEVR-DTDGIPA--IGVNISLSELQA 352 (433)
Q Consensus 314 Fg~ieid~~~~~~~l~~~i~-d~~G~~l--~~~ti~~~~L~~ 352 (433)
|+.|+|..+. .+.++++ +.+|+++ .+.+|..+.-.+
T Consensus 381 ~~~l~v~n~t---~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 381 HGMFDIKNRT---HAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp EEEEEECSSS---EEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred EEEEEEEcCc---EEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 9999986442 5778876 7899975 788887654444
No 4
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.79 E-value=2.6e-18 Score=166.30 Aligned_cols=269 Identities=16% Similarity=0.145 Sum_probs=162.1
Q ss_pred cccEEEEEeeCCCCC--C------hhHHHH----HhhcCCcEEEEeccccccCCCCCccccC-cccccCCCC-----CCC
Q 013940 39 LVSRIAFGSCANQTA--P------QPIWDA----IIKFDPQVFIWMGDNIYGDIKRPSKMFG-KERTIGPWK-----NVP 100 (433)
Q Consensus 39 ~~~riAfgSC~~~~~--~------~~i~~~----Ia~~~pD~~i~lGD~IY~D~~~~~~~~g-~~r~~~~w~-----~~p 100 (433)
..+||++.|+.+... + ..+.+. +.+.+||++|++||.+|.++........ .+.....+. ..|
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p 84 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 84 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence 469999999998642 1 122232 3347999999999999987543210000 000011111 245
Q ss_pred CCCCCCHHHHHHHHHHhcCChhHHHHHhhhcCCCccEEEEEeCCC--CCeeEEEEEeCCCCCCC---------CCCCCCC
Q 013940 101 RFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPV--GRQIKIILLDTRYHRDP---------LSSDGTI 169 (433)
Q Consensus 101 ~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~N~~~giY~sf~~G~~--g~~v~~~~LDtR~~R~~---------~~~~~~m 169 (433)
.......||+...+.... .|....... ..+..||++.++.. +..++|++||+..+... .......
T Consensus 85 ~~~v~GNHD~~~~~~~~~---~~~~~~~~~-~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 160 (313)
T 1ute_A 85 WHVLAGNHDHLGNVSAQI---AYSKISKRW-NFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLA 160 (313)
T ss_dssp EEECCCHHHHHSCHHHHH---HGGGTSTTE-ECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHH
T ss_pred EEEECCCCccCCCccccc---cccccCCCc-cCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccc
Confidence 455678888864332110 000000000 12356888888521 13699999999875432 1122456
Q ss_pred CcHHHHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEeccccccee
Q 013940 170 LGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEI 249 (433)
Q Consensus 170 LG~~Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~ 249 (433)
++++|++||++.|++++++|+||++|+|+++... .+.....+++|.++|++++++ ++|+||+|..+.
T Consensus 161 ~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~-----------~~~~~~~~~~l~~~l~~~~v~--~~l~GH~H~~~~ 227 (313)
T 1ute_A 161 LARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAE-----------HGPTHCLVKQLLPLLTTHKVT--AYLCGHDHNLQY 227 (313)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSS-----------SCCCHHHHHHTHHHHHHTTCS--EEEECSSSSEEE
T ss_pred hHHHHHHHHHHHHHhCCCCeEEEEECCCCccCCC-----------CCCcHHHHHHHHHHHHHcCCc--EEEECChhhhhh
Confidence 7899999999999988889999999999765310 111245578999999999886 889999999887
Q ss_pred EeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeecccccccc-ccCCCCCCEEEEEEecCCCceEE
Q 013940 250 TRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHR-SCTYGQPNFGAIEIDWDATPVAL 328 (433)
Q Consensus 250 ~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~-~~~~~~~nFg~ieid~~~~~~~l 328 (433)
..... ....+++++.+...+.. .+.. ..|.. ..++. .......+|+.|+|+.+ .+
T Consensus 228 ~~~~~----g~~~i~~gs~~~~~~~~-~~~~---------~~~~~------~~~~~~~~~~~~~gy~~l~v~~~----~~ 283 (313)
T 1ute_A 228 LQDEN----GLGFVLSGAGNFMDPSK-KHLR---------KVPNG------YLRFHFGAENSLGGFAYVEITPK----EM 283 (313)
T ss_dssp EECTT----CCEEEEECBSSCCCCCC-TTGG---------GSCTT------CEEEEECCTTSCCEEEEEEECSS----CE
T ss_pred ccCCC----CceEEEECCCcCcCccc-cccc---------cCCCc------ccceeccCcCCCCceEEEEEEcC----EE
Confidence 65322 23455665544321110 0000 01211 00110 01123479999999866 68
Q ss_pred EEEEEcCCCCeEEEEEeecC
Q 013940 329 KIEVRDTDGIPAIGVNISLS 348 (433)
Q Consensus 329 ~~~i~d~~G~~l~~~ti~~~ 348 (433)
++++++.+|+++++.+|+..
T Consensus 284 ~~~~~~~~g~~~~~~~l~~~ 303 (313)
T 1ute_A 284 SVTYIEASGKSLFKTKLPRR 303 (313)
T ss_dssp EEEEEETTSCEEEEEEECCC
T ss_pred EEEEEcCCCcEEEEEEeccc
Confidence 99999999999999988664
No 5
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.78 E-value=6.9e-18 Score=169.95 Aligned_cols=261 Identities=12% Similarity=0.049 Sum_probs=155.2
Q ss_pred ccEEEEEeeCCCC-CCh-hHHHHH----hhcCCcEEEEeccccccCCCCCcc--ccC--cccccCCC---CCCCCCCCCC
Q 013940 40 VSRIAFGSCANQT-APQ-PIWDAI----IKFDPQVFIWMGDNIYGDIKRPSK--MFG--KERTIGPW---KNVPRFVPTS 106 (433)
Q Consensus 40 ~~riAfgSC~~~~-~~~-~i~~~I----a~~~pD~~i~lGD~IY~D~~~~~~--~~g--~~r~~~~w---~~~p~~~~~~ 106 (433)
.+||++.+.-... ..+ .+-+.| .+.+|||+|++||++|. +..... ... -++....- ...|.+.+..
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 5778877766532 112 222223 34799999999999998 432100 000 00000000 1234456678
Q ss_pred HHHHHHHHHHh--------cCChhHHHHHhhh----c---CCCccEEEE----Ee---------CCCCCeeEEEEEeCCC
Q 013940 107 QDEMNFKYHII--------KNHPAYSRLRHNL----N---TKAGIYTSY----TF---------GPVGRQIKIILLDTRY 158 (433)
Q Consensus 107 l~~yr~~Y~~~--------~sdp~l~~l~~~~----N---~~~giY~sf----~~---------G~~g~~v~~~~LDtR~ 158 (433)
.|||+..+... ........+.... + ..+..||++ .. |..+..++||+|||..
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~ 161 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWV 161 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEECCTTT
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEEeCcc
Confidence 89886542211 0111111111111 1 223456554 33 2112359999999997
Q ss_pred CCCCCCCC--CCCCcHHHHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCC
Q 013940 159 HRDPLSSD--GTILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNG 236 (433)
Q Consensus 159 ~R~~~~~~--~~mLG~~Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~ 236 (433)
..++.... ..-..++|++||+++| ++++|+||++|+|+++... . ......+++|.++|++++++
T Consensus 162 l~~~~~~~~~~~~~~~~Ql~WLe~~L--~~~~~~IV~~HhP~~~~~~-------~----~~~~~l~~~l~~ll~~~~Vd- 227 (342)
T 3tgh_A 162 LSSNFPYKKIHEKAWNDLKSQLSVAK--KIADFIIVVGDQPIYSSGY-------S----RGSSYLAYYLLPLLKDAEVD- 227 (342)
T ss_dssp TSTTCSCHHHHHHHHHHHHHHHHHHH--HHCSEEEEECSSCSSCSST-------T----CCCHHHHHHTHHHHHHTTCC-
T ss_pred cccCCcccccchHHHHHHHHHHHHhh--ccCCcEEEEECCCCCCCCC-------C----CCcHHHHHHHHHHHHHcCCC-
Confidence 76432100 0113468999999999 4579999999999876311 0 11245689999999999997
Q ss_pred EEEEecccccceeEeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccccccccCCCCCCEEE
Q 013940 237 VFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGA 316 (433)
Q Consensus 237 vV~LSGDvH~~~~~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~nFg~ 316 (433)
++||||+|..+..... .+..+++++.+........ + .+.. .+ .....||+.
T Consensus 228 -lvlsGH~H~~~~~~~~-----g~~~iv~Ga~g~~~~~~~~----~--------~~~s--------~f---~~~~~Gf~~ 278 (342)
T 3tgh_A 228 -LYISGHDNNMEVIEDN-----DMAHITCGSGSMSQGKSGM----K--------NSKS--------LF---FSSDIGFCV 278 (342)
T ss_dssp -EEEECSSSSEEEEEET-----TEEEEEECCSSCCCCCCSS----C--------CTTE--------EE---EECSSEEEE
T ss_pred -EEEECCCcceeEEeeC-----CcEEEEeCccccccccCCC----C--------CCcc--------ee---ecCCCcEEE
Confidence 8899999999987643 2678888877654321100 0 0110 11 135679999
Q ss_pred EEEecCCCceEEEEEEEc-CCCCeEEEEEeecC
Q 013940 317 IEIDWDATPVALKIEVRD-TDGIPAIGVNISLS 348 (433)
Q Consensus 317 ieid~~~~~~~l~~~i~d-~~G~~l~~~ti~~~ 348 (433)
++++.+ .+++++++ .+|+++++.+|..+
T Consensus 279 l~v~~~----~l~~~~~~~~~G~vld~~~i~k~ 307 (342)
T 3tgh_A 279 HELSNN----GIVTKFVSSKKGEVIYTHKLNIK 307 (342)
T ss_dssp EEEETT----EEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEECC----EEEEEEEECCCCcEEEEEEEECC
Confidence 999876 79999999 99999999999885
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.32 E-value=1.5e-11 Score=120.38 Aligned_cols=243 Identities=13% Similarity=0.142 Sum_probs=139.4
Q ss_pred CCCCCCcccEEEEEeeCCCCC-------C---hh----HHHHHhh--cCCcEEEEeccccccCCCCCccccCcccccCCC
Q 013940 33 KANHEALVSRIAFGSCANQTA-------P---QP----IWDAIIK--FDPQVFIWMGDNIYGDIKRPSKMFGKERTIGPW 96 (433)
Q Consensus 33 ~p~~~~~~~riAfgSC~~~~~-------~---~~----i~~~Ia~--~~pD~~i~lGD~IY~D~~~~~~~~g~~r~~~~w 96 (433)
.+..+.+.+||++.|..+... . .. +.+.+.+ .+||++|++||.++.......... .......
T Consensus 18 ~~~~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~--~~~l~~l 95 (330)
T 3ib7_A 18 AAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKL--RGLVEPF 95 (330)
T ss_dssp ECSSCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHH--HHHHHHH
T ss_pred cccCCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHH--HHHHHHH
Confidence 334445689999999988531 0 12 4445555 689999999999864321110000 0000000
Q ss_pred -C--CCCCCCCCCHHHHHHHHHHhcCChhHHHHHhhhcCCCccEEEEEeCCCCCeeEEEEEeCCCCCCCCCCCCCCCcHH
Q 013940 97 -K--NVPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLNTKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGST 173 (433)
Q Consensus 97 -~--~~p~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~N~~~giY~sf~~G~~g~~v~~~~LDtR~~R~~~~~~~~mLG~~ 173 (433)
+ ..|.......+|++..+...... ..+.....|+.+.++. ++|++||+..+.. ....++++
T Consensus 96 ~~~~~~pv~~v~GNHD~~~~~~~~~~~--------~~~~~~~~~~~~~~~~----~~~i~lds~~~~~----~~~~~~~~ 159 (330)
T 3ib7_A 96 AAQLGAELVWVMGNHDDRAELRKFLLD--------EAPSMAPLDRVCMIDG----LRIIVLDTSVPGH----HHGEIRAS 159 (330)
T ss_dssp HHHHTCEEEECCCTTSCHHHHHHHHHC--------CCCCCSCCCEEEEETT----EEEEECCCCCTTC----CSBCCCHH
T ss_pred HhhcCCCEEEeCCCCCCHHHHHHHhcc--------cccccCCcceEEEeCC----EEEEEecCCCCCC----CCCccCHH
Confidence 0 11222333445544333221110 0012335678999997 9999999986422 23457899
Q ss_pred HHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccceeEeec
Q 013940 174 QWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYD 253 (433)
Q Consensus 174 Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~ 253 (433)
|++||++.|+......+|++.|+|.++... ...+.+ ....+++|.+++++++++ ++++||+|........
T Consensus 160 q~~wl~~~l~~~~~~~~iv~~Hh~p~~~~~------~~~~~~--~~~~~~~l~~~l~~~~v~--~v~~GH~H~~~~~~~~ 229 (330)
T 3ib7_A 160 QLGWLAEELATPAPDGTILALHHPPIPSVL------DMAVTV--ELRDQAALGRVLRGTDVR--AILAGHLHYSTNATFV 229 (330)
T ss_dssp HHHHHHHHTTSCCTTCEEEECSSCSSCCSS------GGGGGG--SBSCHHHHHHHHTTSSEE--EEEECSSSSCEEEEET
T ss_pred HHHHHHHHHHhcccCCeEEEEECCCCCCCc------cccccc--cccCHHHHHHHHhccCce--EEEECCCCCcccceEC
Confidence 999999999988777899999988654211 001111 123467889999888765 8899999999866543
Q ss_pred cCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccccccccCCCCCCEEEEEEecCCCceEEEEEEE
Q 013940 254 CDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATPVALKIEVR 333 (433)
Q Consensus 254 ~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~nFg~ieid~~~~~~~l~~~i~ 333 (433)
....+.+++.........+ ....+ ......+|..++++.+ .++++.+
T Consensus 230 -----g~~~~~~gs~~~~~~~~~~--------------~g~~~----------~~~~~~gy~iv~i~~~----~~~~~~v 276 (330)
T 3ib7_A 230 -----GIPVSVASATCYTQDLTVA--------------AGGTR----------GRDGAQGCNLVHVYPD----TVVHSVI 276 (330)
T ss_dssp -----TEEEEECCCSSCEECTTSC--------------TTCCC----------EESCSCEEEEEEECSS----CEEEEEE
T ss_pred -----CEEEEecCcceeccCCCCC--------------Cccee----------ccCCCCceEEEEEECC----CeEEEEe
Confidence 1334555554432111100 01111 0124568999999887 4566666
Q ss_pred cCC
Q 013940 334 DTD 336 (433)
Q Consensus 334 d~~ 336 (433)
..+
T Consensus 277 ~~~ 279 (330)
T 3ib7_A 277 PLG 279 (330)
T ss_dssp ECS
T ss_pred ccC
Confidence 543
No 7
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.26 E-value=3.4e-11 Score=116.45 Aligned_cols=195 Identities=13% Similarity=0.094 Sum_probs=111.6
Q ss_pred cccEEEEEeeCCCCC-C-------------h---hHH----HHHhhcCCcEEEEeccccccCCCCC---ccccCcccccC
Q 013940 39 LVSRIAFGSCANQTA-P-------------Q---PIW----DAIIKFDPQVFIWMGDNIYGDIKRP---SKMFGKERTIG 94 (433)
Q Consensus 39 ~~~riAfgSC~~~~~-~-------------~---~i~----~~Ia~~~pD~~i~lGD~IY~D~~~~---~~~~g~~r~~~ 94 (433)
+.+||++.|..+... . . ..+ +.+.+.+||++|++||.++...... ...+ +....
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~--~~~~~ 81 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRAL--DTVMA 81 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHH--HHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHH--HHHHH
Confidence 468999999888542 1 0 222 2334479999999999998643110 0000 00000
Q ss_pred CCC--CCCCCCCCCHHHH----HHHHHHhcCChhHHHH-Hhhhc--CCCccEEEEEe-CCCCCeeEEEEEeCCCCCC---
Q 013940 95 PWK--NVPRFVPTSQDEM----NFKYHIIKNHPAYSRL-RHNLN--TKAGIYTSYTF-GPVGRQIKIILLDTRYHRD--- 161 (433)
Q Consensus 95 ~w~--~~p~~~~~~l~~y----r~~Y~~~~sdp~l~~l-~~~~N--~~~giY~sf~~-G~~g~~v~~~~LDtR~~R~--- 161 (433)
..+ ..|.......+|+ +..+......+..... ....+ .....|++|.. +. ++|++||+..+..
T Consensus 82 ~l~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~----~~~i~ld~~~~~~~~~ 157 (322)
T 2nxf_A 82 ELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPN----FRFVLLDAYDLSVIGR 157 (322)
T ss_dssp HHHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETT----EEEEECCTTSBCSSSS
T ss_pred HHHhcCCcEEEecCCCCcccCCHHHHhhhhCCcccccccccccccCCCCceEEEEecCCC----EEEEEEcCceeccccc
Confidence 011 1233445677887 3333332221110000 00000 01346889998 55 9999999976410
Q ss_pred ------------------CC-----CC------------CCCCCcHHHHHHHHHHhcCCC--CCeEEEEecceeecCCcC
Q 013940 162 ------------------PL-----SS------------DGTILGSTQWTWLEKELNGPS--SAITIIVSSIQVISNLSA 204 (433)
Q Consensus 162 ------------------~~-----~~------------~~~mLG~~Q~~WL~~~L~~s~--a~wkIv~s~vpv~~~~~~ 204 (433)
|. .+ ....++++|++||+++|++.. .++.||++|+|+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~- 236 (322)
T 2nxf_A 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAA- 236 (322)
T ss_dssp CTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSS-
T ss_pred CCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCC-
Confidence 10 01 124578999999999998754 46789999999765321
Q ss_pred CCCCCccCCccCCcHHHHHHHHHHHHHh-CCCCEEEEecccccceeEe
Q 013940 205 TTGPLFYMESWGRFPKERDRLFQLIADS-KRNGVFFISGDVHFGEITR 251 (433)
Q Consensus 205 ~~g~~~~~d~W~~~p~eR~rLl~~l~~~-~v~~vV~LSGDvH~~~~~~ 251 (433)
+.. .....++++.++++++ +++ ++++||+|......
T Consensus 237 --------~~~-~~~~~~~~~~~ll~~~~~v~--~~~~GH~H~~~~~~ 273 (322)
T 2nxf_A 237 --------DPI-CLAWNHEAVLSVLRSHQSVL--CFIAGHDHDGGRCT 273 (322)
T ss_dssp --------CGG-GSCTTHHHHHHHHHTCTTEE--EEEECSCTTCEEEE
T ss_pred --------Ccc-ccccCHHHHHHHHhcCCCeE--EEEcCCcCCCCcee
Confidence 110 1111367899999887 443 68999999998764
No 8
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.18 E-value=3.9e-10 Score=115.81 Aligned_cols=108 Identities=16% Similarity=0.257 Sum_probs=73.6
Q ss_pred eEEEEEeCCCCCCC----CCCCCCCCcHHHHHHHHHHhcCCC--CCeEEEEecceeecCCcCCCCCCccCCccCC-c-HH
Q 013940 149 IKIILLDTRYHRDP----LSSDGTILGSTQWTWLEKELNGPS--SAITIIVSSIQVISNLSATTGPLFYMESWGR-F-PK 220 (433)
Q Consensus 149 v~~~~LDtR~~R~~----~~~~~~mLG~~Q~~WL~~~L~~s~--a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~-~-p~ 220 (433)
+.|++||+..+... .......++++|++||++.|++.+ ....|+++|+|..... +.|.. + ..
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~----------~~~~~~~~~~ 260 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHN----------DVIQKGYTIN 260 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSS----------CC--CCSBCT
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCcccc----------cccccccccc
Confidence 99999999876421 112234678999999999997643 3567999999975421 22221 1 12
Q ss_pred HHHHHHHHHHHhCCCCEEEEecccccceeEeeccCCCcceEEEecCCC
Q 013940 221 ERDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGL 268 (433)
Q Consensus 221 eR~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~~~~~l~eiTSSgl 268 (433)
.++++.+++++++++ ++++||+|...........+.+++.+.++++
T Consensus 261 ~~~~l~~ll~~~~v~--lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~ 306 (443)
T 2xmo_A 261 YNQQVIDALTEGAMD--FSLSGHIHTQNIRSAKSTDGKEITDIVTNAL 306 (443)
T ss_dssp THHHHHHHHHHTTCC--EEEECSSCSCEEEEEECTTSCEEEEEECCCT
T ss_pred cHHHHHHHHHHcCCe--EEEECCcccCchhhcccCCCCceEEEEcCcc
Confidence 468899999999887 8899999999876654333445666665543
No 9
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.12 E-value=4.5e-09 Score=99.70 Aligned_cols=186 Identities=13% Similarity=0.144 Sum_probs=108.1
Q ss_pred cEEEEEeeCCCCCC----------hhHHHH----Hhhc--CCcEEEEeccccccCCCCCccccCcccccCCCCCCCCCCC
Q 013940 41 SRIAFGSCANQTAP----------QPIWDA----IIKF--DPQVFIWMGDNIYGDIKRPSKMFGKERTIGPWKNVPRFVP 104 (433)
Q Consensus 41 ~riAfgSC~~~~~~----------~~i~~~----Ia~~--~pD~~i~lGD~IY~D~~~~~~~~g~~r~~~~w~~~p~~~~ 104 (433)
+||++.|..|.... ...++. +.+. +||++|++||.++.......... ....... ..|....
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~--~~~l~~l-~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVA--RQILGSL-NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHH--HHHHTTC-SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHH--HHHHHhc-CCCEEEE
Confidence 47888888775321 133333 3443 68999999999875321110000 0000000 1233334
Q ss_pred CCHHHHHHHHHHhcCChhHHHHHhhhcCC-CccEEEEEeCCCCCeeEEEEEeCCCCCCCCCCCCCCCcHHHHHHHHHHhc
Q 013940 105 TSQDEMNFKYHIIKNHPAYSRLRHNLNTK-AGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELN 183 (433)
Q Consensus 105 ~~l~~yr~~Y~~~~sdp~l~~l~~~~N~~-~giY~sf~~G~~g~~v~~~~LDtR~~R~~~~~~~~mLG~~Q~~WL~~~L~ 183 (433)
...+|+...+....... +. ..... ...|+++..+. +.|++||+..+.. ....++++|++||++.|+
T Consensus 78 ~GNHD~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~----~~~i~ld~~~~~~----~~~~~~~~~~~wl~~~l~ 144 (274)
T 3d03_A 78 PGNHDDKALFLEYLQPL-CP----QLGSDANNMRCAVDDFA----TRLLFIDSSRAGT----SKGWLTDETISWLEAQLF 144 (274)
T ss_dssp CCTTSCHHHHHHHHGGG-SG----GGCSCGGGCCEEECSSS----SEEEECCCCCTTC----SSBCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhhh-hc----CcccCCCceEEEEEeCC----EEEEEEeCCCCCC----CCCeeCHHHHHHHHHHHH
Confidence 45555543332211110 10 00111 23567787775 9999999986532 234678999999999998
Q ss_pred CCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHh-CCCCEEEEecccccceeEee
Q 013940 184 GPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADS-KRNGVFFISGDVHFGEITRY 252 (433)
Q Consensus 184 ~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~-~v~~vV~LSGDvH~~~~~~~ 252 (433)
+.+.+++|+++|.|.+.... . ..+... ...++++.++++++ +++ ++++||+|.......
T Consensus 145 ~~~~~~~iv~~H~p~~~~~~----~--~~~~~~--~~~~~~l~~~l~~~~~v~--~vl~GH~H~~~~~~~ 204 (274)
T 3d03_A 145 EGGDKPATIFMHHPPLPLGN----A--QMDPIA--CENGHRLLALVERFPSLT--RIFCGHNHSLTMTQY 204 (274)
T ss_dssp HHTTSCEEEEESSCSSCCSC----T--TTGGGS--BTTTHHHHHHHHHCTTEE--EEEECSSSSCEEEEE
T ss_pred hCCCCCEEEEECCCCcccCC----c--ccCccc--CcCHHHHHHHHHhCCCce--EEEeCCCCCchhheE
Confidence 76678999999999754310 0 111111 12357888999887 554 889999999987654
No 10
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=96.60 E-value=0.014 Score=57.30 Aligned_cols=240 Identities=10% Similarity=0.036 Sum_probs=112.8
Q ss_pred cccEEEEEeeCCCC----CC----------hhHHHHH----hhcCCcEEEEeccccccCCCCCccccC-cccccCCCC-C
Q 013940 39 LVSRIAFGSCANQT----AP----------QPIWDAI----IKFDPQVFIWMGDNIYGDIKRPSKMFG-KERTIGPWK-N 98 (433)
Q Consensus 39 ~~~riAfgSC~~~~----~~----------~~i~~~I----a~~~pD~~i~lGD~IY~D~~~~~~~~g-~~r~~~~w~-~ 98 (433)
..+||++.|--+.. .. ...++.+ .+.+||++|++||++|.....+..... -.+...... .
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~ 96 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT 96 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 47899999988743 11 2344443 347999999999988865443211000 000000000 0
Q ss_pred CCCCCCCCHHHHHHHHHHhcCChhHHHHHhhhc------CCCccEEEEEeCCCCCeeEEEEEeCCCCCCCCCCCCCCCcH
Q 013940 99 VPRFVPTSQDEMNFKYHIIKNHPAYSRLRHNLN------TKAGIYTSYTFGPVGRQIKIILLDTRYHRDPLSSDGTILGS 172 (433)
Q Consensus 99 ~p~~~~~~l~~yr~~Y~~~~sdp~l~~l~~~~N------~~~giY~sf~~G~~g~~v~~~~LDtR~~R~~~~~~~~mLG~ 172 (433)
.|.......+|+.. . ..+..+.+..| ..........+. +..+.|+.++....+...... .-..+
T Consensus 97 ~pv~~i~GNHD~~~-~------~~~~~~l~~~g~nv~v~~~~~~~~~~~~~--~~~v~i~glp~~~~~~~~~~~-~~~~~ 166 (336)
T 2q8u_A 97 APVVVLPGNHDWKG-L------KLFGNFVTSISSDITFVMSFEPVDVEAKR--GQKVRILPFPYPDESEALRKN-EGDFR 166 (336)
T ss_dssp SCEEECCC-------C------HHHHHHHHHHCSSEEECCSSSCEEEECTT--SCEEEEEEECCC-------CC-SSHHH
T ss_pred CCEEEECCCCCccc-c------ccHHHHHHhcCCEEEEEecccccCceEEe--CCCEEEEECCCCCHHHHHHHh-hHHHH
Confidence 23334455666543 1 11222222111 000000011121 235888888643221110000 11235
Q ss_pred HHHHHHHHHhcC---CCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHH----HHHHHHHHhCCCCEEEEecccc
Q 013940 173 TQWTWLEKELNG---PSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERD----RLFQLIADSKRNGVFFISGDVH 245 (433)
Q Consensus 173 ~Q~~WL~~~L~~---s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~----rLl~~l~~~~v~~vV~LSGDvH 245 (433)
+|.+|+.+.|.. ....++|+++|.|+..... .+ .++. .+-..+.+.+++ ++++||+|
T Consensus 167 ~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~--------~~------~~~~~~~~~v~~~l~~~~~d--~v~~GH~H 230 (336)
T 2q8u_A 167 FFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG--------YA------GIEQGREIIINRALIPSVVD--YAALGHIH 230 (336)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------------------CCCEECGGGSCTTSS--EEEEESCS
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEECccccCCCC--------CC------CccchhhcccCHHHccccCC--EEEEcccc
Confidence 788999888864 3567999999999753210 00 0110 000112234566 78999999
Q ss_pred cceeEeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccccccccCCCCCCEEEEEEecCCCc
Q 013940 246 FGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNCRHRSCTYGQPNFGAIEIDWDATP 325 (433)
Q Consensus 246 ~~~~~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~nFg~ieid~~~~~ 325 (433)
..+..... +.. +-+|+... ..+ +......+|..++++.++
T Consensus 231 ~~~~~~~~-----~~i-~y~GS~~~----------------------~s~----------~e~~~~~~~~lv~i~~~~-- 270 (336)
T 2q8u_A 231 SFREIQKQ-----PLT-IYPGSLIR----------------------IDF----------GEEADEKGAVFVELKRGE-- 270 (336)
T ss_dssp SCEEEEET-----TEE-EECCCSSC----------------------CSG----------GGTTCCCEEEEEEEETTS--
T ss_pred CceEeCCC-----ccE-EECCCCcC----------------------CCc----------cccCCCCEEEEEEEeCCC--
Confidence 98765311 111 11221100 000 001125789999999763
Q ss_pred eEEEEEEEcCCCCeEEEEEe
Q 013940 326 VALKIEVRDTDGIPAIGVNI 345 (433)
Q Consensus 326 ~~l~~~i~d~~G~~l~~~ti 345 (433)
.++++++....+++.+.++
T Consensus 271 -~~~v~~i~~~~r~~~~~~~ 289 (336)
T 2q8u_A 271 -PPRYERIDASPLPLKTLYY 289 (336)
T ss_dssp -CCEEEEEECCCCCEEEEEE
T ss_pred -ccEEEEEECCCEEEEEeec
Confidence 2467777777788877666
No 11
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=96.09 E-value=0.064 Score=48.38 Aligned_cols=56 Identities=11% Similarity=0.029 Sum_probs=35.6
Q ss_pred HHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccc
Q 013940 174 QWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVH 245 (433)
Q Consensus 174 Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH 245 (433)
+.+|+++.|++.....+|+++|.|.... . .... + .+.+.+++++.+++ ++++||+|
T Consensus 135 ~~~~~~~~l~~~~~~~~il~~H~p~~~~-----~----~~~~-~----~~~~~~~~~~~~~~--~~~~GH~H 190 (228)
T 1uf3_A 135 VAEYRLKALWELKDYPKIFLFHTMPYHK-----G----LNEQ-G----SHEVAHLIKTHNPL--LVLVAGKG 190 (228)
T ss_dssp HHHHHHGGGGGSCSCCEEEEESSCBCBT-----T----TBTT-S----BHHHHHHHHHHCCS--EEEECCSS
T ss_pred hHHHHHHHHHhCCCCCeEEEEccCcccC-----C----cccc-C----HHHHHHHHHHhCCC--EEEEcccc
Confidence 3345556665554568999999885431 0 0111 1 13566777778876 88999999
No 12
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=95.77 E-value=0.021 Score=53.17 Aligned_cols=39 Identities=8% Similarity=0.113 Sum_probs=27.7
Q ss_pred ccEEEEEeeCCCCC--ChhHHHHHhhcCCcEEEEecccccc
Q 013940 40 VSRIAFGSCANQTA--PQPIWDAIIKFDPQVFIWMGDNIYG 78 (433)
Q Consensus 40 ~~riAfgSC~~~~~--~~~i~~~Ia~~~pD~~i~lGD~IY~ 78 (433)
.+||++.|.-|.+. ...+.+.+.+.+||++|++||.+..
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~ 45 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKN 45 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCC
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 47999999888542 1233344445799999999998753
No 13
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=93.79 E-value=0.6 Score=46.65 Aligned_cols=148 Identities=13% Similarity=0.064 Sum_probs=76.2
Q ss_pred eeEEEEEeCCCCCCCCCCCCCCCcHHHHHHHHHHhc----C--CCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHH
Q 013940 148 QIKIILLDTRYHRDPLSSDGTILGSTQWTWLEKELN----G--PSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKE 221 (433)
Q Consensus 148 ~v~~~~LDtR~~R~~~~~~~~mLG~~Q~~WL~~~L~----~--s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~e 221 (433)
.+.|+.+..-..+.. ...++..+.+|+.+.++ . .....+|+++|.++..... ..++-...+
T Consensus 125 ~v~i~glp~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~-------~~~se~~~~-- 191 (379)
T 3tho_B 125 KVRILPFPYPDESEA----LRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG-------YAGIEQGRE-- 191 (379)
T ss_dssp EEEEEEECCCCCC--------CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------------CS--
T ss_pred EEEEEECCCCCHHHH----hhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc-------CCCCccccc--
Confidence 477777654322211 22367889999998887 2 2467899999988642110 001100000
Q ss_pred HHHHHHHHHHhCCCCEEEEecccccceeEeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeecccc
Q 013940 222 RDRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKN 301 (433)
Q Consensus 222 R~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~ 301 (433)
..+-..+...+++ .++.||+|..+...- . +..-...|+.. ++.
T Consensus 192 -~~v~~~~~~~~~d--yvalGH~H~~q~~~~---~--~~i~y~GS~~~-------------------------~~f---- 234 (379)
T 3tho_B 192 -IIINRALIPSVVD--YAALGHIHSFREIQK---Q--PLTIYPGSLIR-------------------------IDF---- 234 (379)
T ss_dssp -CCBCGGGSCTTSS--EEEEESCSSCEEEEE---T--TEEEECCCSSC-------------------------CSG----
T ss_pred -cccCHHHcCcCCC--EEEcccccCCeEeCC---C--CcEEecCCCCC-------------------------CCc----
Confidence 0011111123555 778999999864321 1 11111111110 000
Q ss_pred ccccccCCCCCCEEEEEEecCCCceEEEEEEEcCCCCeEEEEEee---cCCccc
Q 013940 302 CRHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNIS---LSELQA 352 (433)
Q Consensus 302 ~~~~~~~~~~~nFg~ieid~~~~~~~l~~~i~d~~G~~l~~~ti~---~~~L~~ 352 (433)
+......+|..++++.++. .+++.+.....++.+.+.+ +++|..
T Consensus 235 ----~E~~~~k~~~lv~~~~~~~---~~v~~i~~~~r~~~~~~~~~~~~~~l~~ 281 (379)
T 3tho_B 235 ----GEEADEKGAVFVELKRGEP---PRYERIDASPLPLKTLYYKKIDTSALKS 281 (379)
T ss_dssp ----GGSSSCCEEEEEECCSSSC---CEEEEEECCCCCEEEEECSBCCHHHHHH
T ss_pred ----ccccCCCEEEEEEEcCCCc---ceEEEeCCCCeeeEEEEcCCCCHHHHHH
Confidence 0112356899999987642 3566777778888888888 555543
No 14
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=91.32 E-value=0.57 Score=41.16 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=50.1
Q ss_pred HHHHHHHHHhCCCCEEEEecccccceeEeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccc
Q 013940 223 DRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNC 302 (433)
Q Consensus 223 ~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~ 302 (433)
+++.+.+++.+++ ++++||.|.....+.. ...-+..|+.+. | .
T Consensus 95 ~~l~~~~~~~~~d--~vi~GHtH~~~~~~~~-----~~~~inpGs~~~------~---------------~--------- 137 (176)
T 3ck2_A 95 QKLDYWAQEEEAA--ICLYGHLHVPSAWLEG-----KILFLNPGSISQ------P---------------R--------- 137 (176)
T ss_dssp HHHHHHHHHTTCS--EEECCSSCCEEEEEET-----TEEEEEECCSSS------C---------------C---------
T ss_pred HHHHHHHHhcCCC--EEEECCcCCCCcEEEC-----CEEEEECCCCCc------C---------------C---------
Confidence 4566777777776 7899999998765432 122232322211 0 0
Q ss_pred cccccCCCCCCEEEEEEecCCCceEEEEEEEcCCCCeEEEEEeec
Q 013940 303 RHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNISL 347 (433)
Q Consensus 303 ~~~~~~~~~~nFg~ieid~~~~~~~l~~~i~d~~G~~l~~~ti~~ 347 (433)
......+|+.++++.+ .++++++..+|+++.+.+.++
T Consensus 138 ----~~~~~~~y~il~~~~~----~~~v~~~~~~~~~~~~~~~~~ 174 (176)
T 3ck2_A 138 ----GTIRECLYARVEIDDS----YFKVDFLTRDHEVYPGLSKEF 174 (176)
T ss_dssp ----TTCCSCCEEEEEECSS----EEEEEEECTTSCBCTTCCEEE
T ss_pred ----CCCCCCeEEEEEEcCC----EEEEEEEEECCEEcchhhccc
Confidence 0011368999999865 688999999998876554443
No 15
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=88.05 E-value=4.8 Score=35.61 Aligned_cols=36 Identities=6% Similarity=-0.059 Sum_probs=25.1
Q ss_pred cEEEEEeeCCCCC----ChhHHHHHh-hcCCcEEEEecccc
Q 013940 41 SRIAFGSCANQTA----PQPIWDAII-KFDPQVFIWMGDNI 76 (433)
Q Consensus 41 ~riAfgSC~~~~~----~~~i~~~Ia-~~~pD~~i~lGD~I 76 (433)
.||++.|..+.+. ....+..+. +.++|+++++||.+
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~ 51 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLC 51 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCB
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCC
Confidence 7999999888531 123333333 36799999999976
No 16
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=85.26 E-value=7.8 Score=35.05 Aligned_cols=37 Identities=3% Similarity=-0.077 Sum_probs=27.1
Q ss_pred ccEEEEEeeCCCCC----ChhHHHHHh-hcCCcEEEEecccc
Q 013940 40 VSRIAFGSCANQTA----PQPIWDAII-KFDPQVFIWMGDNI 76 (433)
Q Consensus 40 ~~riAfgSC~~~~~----~~~i~~~Ia-~~~pD~~i~lGD~I 76 (433)
..||++.|..+.+. ....+..+. +.++|+++++||.+
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~ 66 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVC 66 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 47999999988542 124455543 46899999999976
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=83.41 E-value=0.93 Score=41.78 Aligned_cols=72 Identities=8% Similarity=-0.068 Sum_probs=41.8
Q ss_pred CCcHHHHHHHHHHhcCCC---CCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHh-CCCCEEEEeccc
Q 013940 169 ILGSTQWTWLEKELNGPS---SAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADS-KRNGVFFISGDV 244 (433)
Q Consensus 169 mLG~~Q~~WL~~~L~~s~---a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~-~v~~vV~LSGDv 244 (433)
.++++|++||++...... ...+|++.|.+..... ...-+... ..+++.+++++. +++ ++++||+
T Consensus 109 ~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~--------~~~~~~~~--~~~~l~~~~~~~~~~~--~vi~GHt 176 (252)
T 1nnw_A 109 KLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF--------DGEVLAEQ--PTSYYEAIMRPVKDYE--MLIVASP 176 (252)
T ss_dssp HHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT--------TCCCCSSC--CHHHHHHHHGGGTTSS--EEEESTT
T ss_pred HCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc--------ccccCCCC--CHHHHHHHHhcCCCCC--EEEECCc
Confidence 356789999986322111 2357888886532110 00011111 135677777776 666 8899999
Q ss_pred ccceeEee
Q 013940 245 HFGEITRY 252 (433)
Q Consensus 245 H~~~~~~~ 252 (433)
|.......
T Consensus 177 H~~~~~~~ 184 (252)
T 1nnw_A 177 MYPVDAMT 184 (252)
T ss_dssp CSEEEEEE
T ss_pred cccceEec
Confidence 99876654
No 18
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=75.73 E-value=34 Score=35.61 Aligned_cols=85 Identities=19% Similarity=0.144 Sum_probs=48.4
Q ss_pred cEEEEEeCCCCCeeEEEEEeCCCCC---CCCCCCCCCCc-HHHHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCcc
Q 013940 136 IYTSYTFGPVGRQIKIILLDTRYHR---DPLSSDGTILG-STQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFY 211 (433)
Q Consensus 136 iY~sf~~G~~g~~v~~~~LDtR~~R---~~~~~~~~mLG-~~Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~ 211 (433)
.|.-+..+ |.++.|+-+++.... .+. +.-.+.. .++.+...++|++..++..|+.+|.+.-.
T Consensus 155 ~~~i~~~~--G~kIgiiG~~~~~~~~~~~~~-~~~~~~d~~~~~~~~v~~l~~~~~d~iIvL~H~g~~~----------- 220 (552)
T 2z1a_A 155 PYAVVVVG--GERVGIIGLTTPDTREISNPG-PTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGE----------- 220 (552)
T ss_dssp SEEEEEET--TEEEEEEEEECTTHHHHSCCC-TTCEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH-----------
T ss_pred CeEEEEEC--CEEEEEEEecccchhhccCCC-CCcEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcch-----------
Confidence 46666665 346888888876421 121 1112222 14444444567655678899999876310
Q ss_pred CCccCCcHHHHHHHHHHHHH-hCCCCEEEEeccccccee
Q 013940 212 MESWGRFPKERDRLFQLIAD-SKRNGVFFISGDVHFGEI 249 (433)
Q Consensus 212 ~d~W~~~p~eR~rLl~~l~~-~~v~~vV~LSGDvH~~~~ 249 (433)
+ .+ +.++ .+++ ++|+||.|....
T Consensus 221 ---------d-~~---la~~~~gvD--lIlgGHtH~~~~ 244 (552)
T 2z1a_A 221 ---------D-LK---LARRLVGVQ--VIVGGHSHTLLG 244 (552)
T ss_dssp ---------H-HH---HHTTCSSCC--EEEECSSCCCBS
T ss_pred ---------H-HH---HHHhCCCcc--EEEeCCcCcccc
Confidence 1 11 1222 4677 889999998754
No 19
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=74.57 E-value=5 Score=35.53 Aligned_cols=53 Identities=15% Similarity=0.301 Sum_probs=36.5
Q ss_pred CCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccceeEeec
Q 013940 187 SAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEITRYD 253 (433)
Q Consensus 187 a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~ 253 (433)
...+|+++|.|.... .+. .++...++|.+++++.+++ ++++||+|......++
T Consensus 105 ~~~~i~~~H~~~~~~----------~~~--~~~~~~~~l~~~~~~~~~~--~vi~GHtH~~~~~~~~ 157 (195)
T 1xm7_A 105 KGKRILLSHYPAKDP----------ITE--RYPDRQEMVREIYFKENCD--LLIHGHVHWNREGIKC 157 (195)
T ss_dssp TTEEEEEESSCSSCS----------SCC--SCHHHHHHHHHHHHHTTCS--EEEECCCCCCSCC--C
T ss_pred CCcEEEEEccCCcCC----------Ccc--cccchHHHHHHHHHHcCCc--EEEECCcCCCCccccc
Confidence 357899998775321 011 1355678999999988876 8899999998776553
No 20
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=72.31 E-value=1.8 Score=40.10 Aligned_cols=36 Identities=19% Similarity=0.074 Sum_probs=27.2
Q ss_pred ccEEEEEeeCCCCCChhHHHHHhh--cCCcEEEEeccccc
Q 013940 40 VSRIAFGSCANQTAPQPIWDAIIK--FDPQVFIWMGDNIY 77 (433)
Q Consensus 40 ~~riAfgSC~~~~~~~~i~~~Ia~--~~pD~~i~lGD~IY 77 (433)
..||++.|..+ +....+..+.+ .++|.++++||.+-
T Consensus 3 ~mri~~isDiH--g~~~~l~~~l~~~~~~d~ii~~GDl~~ 40 (246)
T 3rqz_A 3 AMRILIISDVH--ANLVALEAVLSDAGRVDDIWSLGDIVG 40 (246)
T ss_dssp CCCEEEECCCT--TCHHHHHHHHHHHCSCSEEEECSCCSS
T ss_pred CcEEEEEeecC--CCHHHHHHHHHhccCCCEEEECCCcCC
Confidence 47899999887 44555555444 28999999999984
No 21
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=68.50 E-value=3 Score=39.51 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=27.9
Q ss_pred cccEEEEEeeCCCCCChhH----HHHHhhcCCcEEEEeccccc
Q 013940 39 LVSRIAFGSCANQTAPQPI----WDAIIKFDPQVFIWMGDNIY 77 (433)
Q Consensus 39 ~~~riAfgSC~~~~~~~~i----~~~Ia~~~pD~~i~lGD~IY 77 (433)
+.+||++.|..+- .... .+.+.+.++|.++++||.+.
T Consensus 10 ~~~~i~~iSDiHg--~~~~l~~vl~~~~~~~~D~ii~~GDlv~ 50 (270)
T 3qfm_A 10 DMTKIALLSDIHG--NTTALEAVLADARQLGVDEYWLLGDILM 50 (270)
T ss_dssp -CEEEEEECCCTT--CHHHHHHHHHHHHHTTCCEEEECSCCSS
T ss_pred cccEEEEEecCCC--CHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 4789999998884 3444 44455578999999999985
No 22
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=66.46 E-value=3.7 Score=36.71 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=25.6
Q ss_pred ccEEEEEeeCCCCCChhHHHH----HhhcCCcEEEEecccc
Q 013940 40 VSRIAFGSCANQTAPQPIWDA----IIKFDPQVFIWMGDNI 76 (433)
Q Consensus 40 ~~riAfgSC~~~~~~~~i~~~----Ia~~~pD~~i~lGD~I 76 (433)
..||++.|..+ +....++. +.+.++|+++++||.+
T Consensus 25 ~m~i~~iSD~H--g~~~~l~~~l~~~~~~~~D~ii~~GDl~ 63 (190)
T 1s3l_A 25 HMKIGIMSDTH--DHLPNIRKAIEIFNDENVETVIHCGDFV 63 (190)
T ss_dssp -CEEEEECCCT--TCHHHHHHHHHHHHHSCCSEEEECSCCC
T ss_pred CeEEEEEeeCC--CCHHHHHHHHHHHhhcCCCEEEECCCCC
Confidence 38999999888 34444443 4446899999999975
No 23
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=65.72 E-value=2.7 Score=37.23 Aligned_cols=46 Identities=13% Similarity=0.005 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCcccEEEEEeeCCCCC----ChhHHHHHhhcCCcEEEEeccccc
Q 013940 28 GNDSTKANHEALVSRIAFGSCANQTA----PQPIWDAIIKFDPQVFIWMGDNIY 77 (433)
Q Consensus 28 ~~t~T~p~~~~~~~riAfgSC~~~~~----~~~i~~~Ia~~~pD~~i~lGD~IY 77 (433)
||..+.++.. .||++.|..+-.+ -..+++.+. .++|+++++||.+.
T Consensus 13 ~~~~~~~~~m---mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~ 62 (178)
T 2kkn_A 13 GRENLYFQGV---KRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVD 62 (178)
T ss_dssp ---------C---EEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSC
T ss_pred cccccccCcc---eEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCC
Confidence 5444444332 7999999888311 224455544 78999999999764
No 24
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=58.41 E-value=9.2 Score=33.19 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=25.6
Q ss_pred cEEEEEeeCCCCCChhHHHHHhh---cCCcEEEEeccccc
Q 013940 41 SRIAFGSCANQTAPQPIWDAIIK---FDPQVFIWMGDNIY 77 (433)
Q Consensus 41 ~riAfgSC~~~~~~~~i~~~Ia~---~~pD~~i~lGD~IY 77 (433)
.||++.|..+ +....++.+.+ .++|+++++||..+
T Consensus 7 m~i~~isD~H--~~~~~~~~~~~~~~~~~d~i~~~GD~~~ 44 (176)
T 3ck2_A 7 QTIIVMSDSH--GDSLIVEEVRDRYVGKVDAVFHNGDSEL 44 (176)
T ss_dssp EEEEEECCCT--TCHHHHHHHHHHHTTTSSEEEECSCCCS
T ss_pred cEEEEEecCC--CCHHHHHHHHHHhhcCCCEEEECCCCch
Confidence 7899999888 34455555443 28999999999643
No 25
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=51.89 E-value=11 Score=34.47 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=38.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCeEEEEecceeecCCcCCCCCCccCCccCCcHHHHHHHHHHHHHhCCCCEEEEecccccc
Q 013940 168 TILGSTQWTWLEKELNGPSSAITIIVSSIQVISNLSATTGPLFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFG 247 (433)
Q Consensus 168 ~mLG~~Q~~WL~~~L~~s~a~wkIv~s~vpv~~~~~~~~g~~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~ 247 (433)
..|+++|++||++ |......-++++.|-...+ ..| .+......+.+.+++.+++ ++++||.|..
T Consensus 91 ~~l~~~~~~~L~~-lp~~~~~~~i~~~Hg~p~~------------~~~-~~~~~~~~~~~~l~~~~~~--l~i~GHtH~p 154 (246)
T 3rqz_A 91 MQLQAEHLQYLES-LPNRMIDGDWTVVHGSPRH------------PIW-EYIYNARIAALNFPAFDTP--LCFVGHTHVP 154 (246)
T ss_dssp HHCCHHHHHHHHH-CCSEEEETTEEEESSCSSS------------TTT-CCCCSHHHHHHHGGGCCSS--EEECCSSSSE
T ss_pred HHcCHHHHHHHHh-CCcEEEECCEEEEECCcCC------------ccc-cccCChHHHHHHHhccCCC--EEEECCcCcc
Confidence 4577899999985 3211001134444432111 111 2222235667777777766 8899999987
Q ss_pred eeEe
Q 013940 248 EITR 251 (433)
Q Consensus 248 ~~~~ 251 (433)
....
T Consensus 155 ~~~~ 158 (246)
T 3rqz_A 155 LYIR 158 (246)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6654
No 26
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=49.80 E-value=8.9 Score=34.55 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=26.3
Q ss_pred cEEEEEeeCCCCCChhHHH----HHhhcCCcEEEEecccccc
Q 013940 41 SRIAFGSCANQTAPQPIWD----AIIKFDPQVFIWMGDNIYG 78 (433)
Q Consensus 41 ~riAfgSC~~~~~~~~i~~----~Ia~~~pD~~i~lGD~IY~ 78 (433)
.||++.|..+-+ ...++ .+.+.++|+++++||.+..
T Consensus 26 mki~~iSD~H~~--~~~l~~~l~~~~~~~~d~vi~~GDl~~~ 65 (208)
T 1su1_A 26 MKLMFASDIHGS--LPATERVLELFAQSGAQWLVILGDVLNH 65 (208)
T ss_dssp CEEEEECCCTTB--HHHHHHHHHHHHHHTCSEEEECSCCSCC
T ss_pred EEEEEEEcCCCC--HHHHHHHHHHHHhcCCCEEEECCCcccc
Confidence 789999988743 33343 3444689999999998853
No 27
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=48.36 E-value=17 Score=32.78 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCCEEEEecccccceeEe
Q 013940 223 DRLFQLIADSKRNGVFFISGDVHFGEITR 251 (433)
Q Consensus 223 ~rLl~~l~~~~v~~vV~LSGDvH~~~~~~ 251 (433)
+++.+++++.+++ ++++||.|.....+
T Consensus 131 ~~l~~~~~~~~~d--~vl~GHtH~~~~~~ 157 (215)
T 2a22_A 131 GSLEQWQRRLDCD--ILVTGHTHKLRVFE 157 (215)
T ss_dssp HHHHHHHHHHTCS--EEEECSSCCCEEEE
T ss_pred HHHHHHHhhcCCC--EEEECCcCCCccEe
Confidence 4566666667776 88999999887644
No 28
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=47.03 E-value=11 Score=34.41 Aligned_cols=37 Identities=8% Similarity=0.007 Sum_probs=25.3
Q ss_pred cEEEEEeeCCCCC--ChhHHHHHh---hc--CCcEEEEeccccc
Q 013940 41 SRIAFGSCANQTA--PQPIWDAII---KF--DPQVFIWMGDNIY 77 (433)
Q Consensus 41 ~riAfgSC~~~~~--~~~i~~~Ia---~~--~pD~~i~lGD~IY 77 (433)
.||++.|..|-+. ...+.+.+. +. ++|+++++||.+-
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~ 45 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVG 45 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSS
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCC
Confidence 4789999887431 123344454 54 7999999999874
No 29
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=45.00 E-value=11 Score=35.46 Aligned_cols=28 Identities=11% Similarity=0.262 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCCEEEEecccccceeEe
Q 013940 222 RDRLFQLIADSKRNGVFFISGDVHFGEITR 251 (433)
Q Consensus 222 R~rLl~~l~~~~v~~vV~LSGDvH~~~~~~ 251 (433)
.++|.+++++.+++ ++++||.|......
T Consensus 153 ~~~l~~~~~~~~~d--~~i~GHtH~~~~~~ 180 (270)
T 3qfm_A 153 QEEFDRLVTHPPCD--IAVYGHIHQQLLRY 180 (270)
T ss_dssp HHHHHHTTTTTTCS--EEECCSSCSEEEEE
T ss_pred HHHHHHHhcccCCC--EEEECCcCchHhee
Confidence 44566666666666 88999999876543
No 30
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=44.43 E-value=11 Score=28.92 Aligned_cols=15 Identities=7% Similarity=0.067 Sum_probs=9.6
Q ss_pred chhHHHHHHHHHhhh
Q 013940 401 GSIFLKFLLFALVGL 415 (433)
Q Consensus 401 ~~~~~~~~~~~~~~~ 415 (433)
|.+++|.||+++..+
T Consensus 22 gGLifA~vLfi~GI~ 36 (74)
T 2zxe_G 22 VGLIVAAVLCVIGII 36 (74)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHH
Confidence 567777777665544
No 31
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=42.71 E-value=11 Score=28.38 Aligned_cols=15 Identities=20% Similarity=0.062 Sum_probs=9.5
Q ss_pred chhHHHHHHHHHhhh
Q 013940 401 GSIFLKFLLFALVGL 415 (433)
Q Consensus 401 ~~~~~~~~~~~~~~~ 415 (433)
|.+++|.+|+++..+
T Consensus 20 gGLifA~vLfi~GI~ 34 (67)
T 2jp3_A 20 GGLIFGGLLCIAGIA 34 (67)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHH
Confidence 567777777665444
No 32
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=42.56 E-value=23 Score=34.94 Aligned_cols=39 Identities=10% Similarity=0.053 Sum_probs=26.8
Q ss_pred cccEEEEEeeCCCCCC-h----------hHHHHH----hhcCCcEEEEeccccc
Q 013940 39 LVSRIAFGSCANQTAP-Q----------PIWDAI----IKFDPQVFIWMGDNIY 77 (433)
Q Consensus 39 ~~~riAfgSC~~~~~~-~----------~i~~~I----a~~~pD~~i~lGD~IY 77 (433)
..+||++.|--|.... + ..++.+ .+.+||++|++||.+-
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d 72 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFN 72 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBS
T ss_pred CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 4689999998885421 1 234433 3478999999999753
No 33
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=41.59 E-value=12 Score=28.56 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=10.1
Q ss_pred cchhHHHHHHHHHhhh
Q 013940 400 LGSIFLKFLLFALVGL 415 (433)
Q Consensus 400 ~~~~~~~~~~~~~~~~ 415 (433)
+|.+++|.+|+++..+
T Consensus 18 iGGLifA~vLfi~GI~ 33 (72)
T 2jo1_A 18 IGGLVIAGILFILGIL 33 (72)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHH
Confidence 3567777777665444
No 34
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=36.53 E-value=27 Score=31.27 Aligned_cols=36 Identities=11% Similarity=-0.034 Sum_probs=25.3
Q ss_pred ccEEEEEeeCCCCCChhHHHHHhh-----cCCcEEEEeccccc
Q 013940 40 VSRIAFGSCANQTAPQPIWDAIIK-----FDPQVFIWMGDNIY 77 (433)
Q Consensus 40 ~~riAfgSC~~~~~~~~i~~~Ia~-----~~pD~~i~lGD~IY 77 (433)
..|+++.|..| +....+..+.+ .++|.++++||.+.
T Consensus 12 ~~~i~visDiH--g~~~~l~~~l~~~~~~~~~d~~i~~GD~~~ 52 (221)
T 1g5b_A 12 YRNIWVVGDLH--GCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (221)
T ss_dssp CSCEEEECCCT--TCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred CceEEEEEcCC--CCHHHHHHHHHHccCCCCCCEEEEeCCccC
Confidence 46789988777 44444444433 26899999999874
No 35
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=35.82 E-value=34 Score=35.33 Aligned_cols=38 Identities=24% Similarity=0.261 Sum_probs=31.1
Q ss_pred CCCCEEEEEEecCCCceEEEEEEEcCCC-CeEEEEEeecCCcc
Q 013940 310 GQPNFGAIEIDWDATPVALKIEVRDTDG-IPAIGVNISLSELQ 351 (433)
Q Consensus 310 ~~~nFg~ieid~~~~~~~l~~~i~d~~G-~~l~~~ti~~~~L~ 351 (433)
+..+|+.++|+.+ .++++.+..+. +++...+|.+++..
T Consensus 344 ~~kg~~lveI~~~----~v~ve~I~L~t~Rpf~~~~i~L~~~~ 382 (472)
T 4fbk_A 344 APKHCGILNITGK----DFHLEKIRLRTVRPFIMKDIILSEVS 382 (472)
T ss_dssp SCCEEEEEEEETT----EEEEEEEECSSSCCEEEEEEEGGGCS
T ss_pred CCCEEEEEEEECC----EEEEEEEECCCcccEEEEEEEEeccc
Confidence 4679999999975 57888888775 78999999998763
No 36
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=35.38 E-value=19 Score=31.62 Aligned_cols=81 Identities=21% Similarity=0.104 Sum_probs=47.4
Q ss_pred HHHHHHHHHhCCCCEEEEecccccceeEeeccCCCcceEEEecCCCcccccccCCCCchhhHhhhhccCCCceeeccccc
Q 013940 223 DRLFQLIADSKRNGVFFISGDVHFGEITRYDCDVGYALYDITSSGLTQAVEKAVPAPFHFVVRFLAWWTPSTMRVIGKNC 302 (433)
Q Consensus 223 ~rLl~~l~~~~v~~vV~LSGDvH~~~~~~~~~~~~~~l~eiTSSglt~~~~~~~p~~~~~~~~~~~~~~p~~~r~~~~~~ 302 (433)
++|.+++++.+++ ++++||.|.....+.. ...-+.+|+.+... .|.
T Consensus 107 ~~l~~~~~~~~~d--~vi~GHtH~~~~~~~~-----~~~~inpGS~~~~~------------------~~~--------- 152 (192)
T 1z2w_A 107 ASLALLQRQFDVD--ILISGHTHKFEAFEHE-----NKFYINPGSATGAY------------------NAL--------- 152 (192)
T ss_dssp HHHHHHHHHHSSS--EEECCSSCCCEEEEET-----TEEEEECCCTTCCC------------------CSS---------
T ss_pred HHHHHHHHhcCCC--EEEECCcCcCccEeEC-----CEEEEECCcccccC------------------CCC---------
Confidence 4566677777776 7899999998765432 12333333332210 010
Q ss_pred cccccCCCCCCEEEEEEecCCCceEEEEEEEcCCCCeEEEEEe
Q 013940 303 RHRSCTYGQPNFGAIEIDWDATPVALKIEVRDTDGIPAIGVNI 345 (433)
Q Consensus 303 ~~~~~~~~~~nFg~ieid~~~~~~~l~~~i~d~~G~~l~~~ti 345 (433)
......+|+.++++.+ .++++++..++..+.-.++
T Consensus 153 ----~~~~~~~y~il~~~~~----~~~~~~~~~~~~~~~v~~~ 187 (192)
T 1z2w_A 153 ----ETNIIPSFVLMDIQAS----TVVTYVYQLIGDDVKVERI 187 (192)
T ss_dssp ----CSCCCCEEEEEEEETT----EEEEEEEEEETTEEEEEEE
T ss_pred ----CcCCCCcEEEEEEECC----EEEEEEEEccCCEEEEEEE
Confidence 0123468999999865 5778887776655444333
No 37
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=34.34 E-value=34 Score=34.76 Aligned_cols=39 Identities=10% Similarity=0.039 Sum_probs=31.5
Q ss_pred CCCCEEEEEEecCCCceEEEEEEEcCC-CCeEEEEEeecCCccc
Q 013940 310 GQPNFGAIEIDWDATPVALKIEVRDTD-GIPAIGVNISLSELQA 352 (433)
Q Consensus 310 ~~~nFg~ieid~~~~~~~l~~~i~d~~-G~~l~~~ti~~~~L~~ 352 (433)
+..+|+.++|+.+ .++++.+..+ -+++...++.+++...
T Consensus 300 ~~k~~~lvei~~~----~~~ve~i~l~~~R~f~~~~v~l~~~~~ 339 (431)
T 3t1i_A 300 VKKHVGLLRIKGR----KMNMHKIPLHTVRQFFMEDIVLANHPD 339 (431)
T ss_dssp SCCEEEEEEEETT----EEEEEEEECSSSCCEEEEEEEGGGCTT
T ss_pred CCCEEEEEEEECC----EEEEEEEECCCcceEEEEEEEEecccc
Confidence 3568999999975 6788888877 6889999999987653
No 38
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=34.21 E-value=36 Score=29.74 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=24.4
Q ss_pred cEEEEEeeCCCC-CCh----------hHHH----HHhh--cCCcEEEEecccccc
Q 013940 41 SRIAFGSCANQT-APQ----------PIWD----AIIK--FDPQVFIWMGDNIYG 78 (433)
Q Consensus 41 ~riAfgSC~~~~-~~~----------~i~~----~Ia~--~~pD~~i~lGD~IY~ 78 (433)
.||++.|..+.. ... ...+ .+.+ .++|+++++||.+..
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~ 56 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWH 56 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSC
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCC
Confidence 578899988843 111 1122 2233 489999999998864
No 39
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=32.97 E-value=40 Score=32.25 Aligned_cols=38 Identities=11% Similarity=0.076 Sum_probs=25.0
Q ss_pred cEEEEEeeCCCCCCh-----------hHHHH----HhhcCCcEEEEecccccc
Q 013940 41 SRIAFGSCANQTAPQ-----------PIWDA----IIKFDPQVFIWMGDNIYG 78 (433)
Q Consensus 41 ~riAfgSC~~~~~~~-----------~i~~~----Ia~~~pD~~i~lGD~IY~ 78 (433)
+||++.|--|..... ..++. +.+.+||++|++||.+..
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~ 53 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHS 53 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSS
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCC
Confidence 478888877753211 23333 334799999999998754
No 40
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=32.49 E-value=42 Score=33.98 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=29.9
Q ss_pred CCCCEEEEEEecCCCceEEEEEEEcCCC-CeEEEEEeecCCc
Q 013940 310 GQPNFGAIEIDWDATPVALKIEVRDTDG-IPAIGVNISLSEL 350 (433)
Q Consensus 310 ~~~nFg~ieid~~~~~~~l~~~i~d~~G-~~l~~~ti~~~~L 350 (433)
+..+|+.++|+.+ .++++.+..+- ++....++.+++.
T Consensus 281 ~~kg~~lvei~~~----~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 281 APKHCGILNITGK----DFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp SCCEEEEEEEETT----EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred CCCEEEEEEEECC----EEEEEEEECCCcccEEEEEEEeecc
Confidence 4678999999975 57788887765 7788999999876
No 41
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=29.49 E-value=1.3e+02 Score=30.26 Aligned_cols=40 Identities=15% Similarity=0.069 Sum_probs=27.8
Q ss_pred CCcccEEEEEeeCCCCCC----------hhHHHH----HhhcCCcEEEEecccc
Q 013940 37 EALVSRIAFGSCANQTAP----------QPIWDA----IIKFDPQVFIWMGDNI 76 (433)
Q Consensus 37 ~~~~~riAfgSC~~~~~~----------~~i~~~----Ia~~~pD~~i~lGD~I 76 (433)
+...+||++.|-.|.... ...++. +.+.+||+++..||.+
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLf 63 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIF 63 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCB
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccc
Confidence 345799999998885311 123333 4458999999999974
No 42
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=29.06 E-value=2.6e+02 Score=28.72 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=28.3
Q ss_pred CCCcccEEEEEeeCCCCCC----------hhHHHH----HhhcCCcEEEEeccccc
Q 013940 36 HEALVSRIAFGSCANQTAP----------QPIWDA----IIKFDPQVFIWMGDNIY 77 (433)
Q Consensus 36 ~~~~~~riAfgSC~~~~~~----------~~i~~~----Ia~~~pD~~i~lGD~IY 77 (433)
++...+||++.|..|.... ...++. +.+.+||++|++||.+-
T Consensus 72 ~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 127 (472)
T 4fbk_A 72 GSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 127 (472)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBS
T ss_pred CCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 3345799999998885311 123333 44589999999999753
No 43
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=27.41 E-value=48 Score=30.81 Aligned_cols=35 Identities=9% Similarity=0.192 Sum_probs=24.5
Q ss_pred cEEEEEeeCCCCCChhHHHHHhh----cCC-cEEEEeccccc
Q 013940 41 SRIAFGSCANQTAPQPIWDAIIK----FDP-QVFIWMGDNIY 77 (433)
Q Consensus 41 ~riAfgSC~~~~~~~~i~~~Ia~----~~p-D~~i~lGD~IY 77 (433)
.||++.|..+ +....+..+.+ .++ |.++++||.+.
T Consensus 19 ~~i~visDiH--g~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIH--GCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCT--TCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCC--CCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 4889988776 45555555443 345 99999999874
No 44
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=24.98 E-value=2.5e+02 Score=28.37 Aligned_cols=42 Identities=10% Similarity=-0.025 Sum_probs=29.0
Q ss_pred CCcccEEEEEeeCCCCCC----------hhHHHH----HhhcCCcEEEEecccccc
Q 013940 37 EALVSRIAFGSCANQTAP----------QPIWDA----IIKFDPQVFIWMGDNIYG 78 (433)
Q Consensus 37 ~~~~~riAfgSC~~~~~~----------~~i~~~----Ia~~~pD~~i~lGD~IY~ 78 (433)
+...+||++.|..|.... ...++. +.+.+||++|++||.+-.
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~ 84 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 84 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSS
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccC
Confidence 345799999998885311 113333 445899999999998543
No 45
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=24.69 E-value=62 Score=31.10 Aligned_cols=35 Identities=14% Similarity=-0.053 Sum_probs=25.7
Q ss_pred cccEEEEEeeCCCCCChhHHHHHhhcCCcEEEEecccccc
Q 013940 39 LVSRIAFGSCANQTAPQPIWDAIIKFDPQVFIWMGDNIYG 78 (433)
Q Consensus 39 ~~~riAfgSC~~~~~~~~i~~~Ia~~~pD~~i~lGD~IY~ 78 (433)
..+||++.|.-+-+.. .. .-.++|++|++||.+..
T Consensus 58 ~~mri~~iSD~H~~~~-~l----~i~~~D~vi~aGDl~~~ 92 (296)
T 3rl5_A 58 GHTRFVCISDTRSRTD-GI----QMPYGDILLHTGDFTEL 92 (296)
T ss_dssp TEEEEEEEBCCTTCCT-TC----CCCSCSEEEECSCCSSS
T ss_pred CCeEEEEEeeCCCCcc-hh----ccCCCCEEEECCcccCC
Confidence 3589999999885422 11 22589999999999764
No 46
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=24.46 E-value=49 Score=33.92 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=51.9
Q ss_pred cEEEEEeCCCCCeeEEEEEeCCCCCC---CCCCCC-CCCc--HHHHHHHHHHhcC-CCCCeEEEEecceeecCCcCCCCC
Q 013940 136 IYTSYTFGPVGRQIKIILLDTRYHRD---PLSSDG-TILG--STQWTWLEKELNG-PSSAITIIVSSIQVISNLSATTGP 208 (433)
Q Consensus 136 iY~sf~~G~~g~~v~~~~LDtR~~R~---~~~~~~-~mLG--~~Q~~WL~~~L~~-s~a~wkIv~s~vpv~~~~~~~~g~ 208 (433)
.|.-+..+ |.++.|+-+.+..... |....+ .+.. ++-.+|++ +|++ ..++..|+.+|.+...... .+
T Consensus 129 ~~~i~~~~--G~kIgiiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~~~~d~iI~l~H~g~~~~~~--~~- 202 (516)
T 1hp1_A 129 PWALFKRQ--DLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQTEKPDIIIAATHMGHYDNGE--HG- 202 (516)
T ss_dssp SEEEEEET--TEEEEEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHHTCCSEEEEEEESCCCGGGC--CT-
T ss_pred CeEEEEEC--CEEEEEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhcCCCCEEEEEecCCccCCCc--cc-
Confidence 35556665 3468888887764321 110011 1111 22345555 4654 3678999999988643210 01
Q ss_pred CccCCccCCcHHHHHHHHHHHHHhCCCCEEEEeccccccee
Q 013940 209 LFYMESWGRFPKERDRLFQLIADSKRNGVFFISGDVHFGEI 249 (433)
Q Consensus 209 ~~~~d~W~~~p~eR~rLl~~l~~~~v~~vV~LSGDvH~~~~ 249 (433)
+. .+ +..+|.+.+...+++ ++|+||.|....
T Consensus 203 ----~~---~~-~~~~la~~~~~~~iD--lilgGHtH~~~~ 233 (516)
T 1hp1_A 203 ----SN---AP-GDVEMARALPAGSLA--MIVGGHSQDPVC 233 (516)
T ss_dssp ----TS---CC-CHHHHHHHSCTTSSS--EEECCSSCCBCC
T ss_pred ----cc---Cc-hHHHHHHhCCCCcee--EEECCCCCcccc
Confidence 10 01 123444444444577 889999998643
No 47
>3b8e_G Na+/K+ ATPase gamma subunit transcript variant A; P-type ATPase, cation pump, membrane protein, hydrolase, ATP-binding, calcium transport; HET: PC1; 3.50A {Sus scrofa} PDB: 3kdp_G*
Probab=20.40 E-value=6.7 Score=24.78 Aligned_cols=8 Identities=0% Similarity=0.289 Sum_probs=4.9
Q ss_pred hhhhhccc
Q 013940 424 RLFLRKCK 431 (433)
Q Consensus 424 ~~~~~~~~ 431 (433)
-++.+|||
T Consensus 22 iilS~kck 29 (29)
T 3b8e_G 22 IILSKRLR 29 (29)
T ss_dssp TSSCSSCC
T ss_pred HHHhcccC
Confidence 45567776
Done!