Query 013943
Match_columns 433
No_of_seqs 172 out of 1953
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 20:00:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 2.2E-41 7.6E-46 324.8 28.3 343 33-417 3-353 (357)
2 2xve_A Flavin-containing monoo 100.0 5.6E-40 1.9E-44 325.4 30.4 308 34-416 3-341 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 3.5E-40 1.2E-44 331.6 23.3 367 32-415 7-456 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 9.8E-39 3.4E-43 321.3 25.4 366 32-414 8-464 (545)
5 4ap3_A Steroid monooxygenase; 100.0 2.1E-38 7.2E-43 319.2 27.2 365 32-413 20-468 (549)
6 1w4x_A Phenylacetone monooxyge 100.0 1E-37 3.6E-42 315.2 26.7 369 32-417 15-467 (542)
7 2gv8_A Monooxygenase; FMO, FAD 100.0 1.1E-37 3.7E-42 308.3 25.5 302 32-416 5-362 (447)
8 2q7v_A Thioredoxin reductase; 100.0 2.2E-36 7.4E-41 286.7 24.2 291 32-419 7-315 (325)
9 3f8d_A Thioredoxin reductase ( 100.0 1E-36 3.5E-41 288.3 21.1 287 33-418 15-319 (323)
10 3lzw_A Ferredoxin--NADP reduct 100.0 9.6E-37 3.3E-41 289.7 20.6 294 32-418 6-317 (332)
11 3ab1_A Ferredoxin--NADP reduct 100.0 3.2E-36 1.1E-40 289.6 23.7 306 26-419 7-331 (360)
12 3itj_A Thioredoxin reductase 1 100.0 8.6E-37 2.9E-41 290.8 19.4 295 30-417 19-336 (338)
13 2zbw_A Thioredoxin reductase; 100.0 2.3E-36 7.8E-41 287.7 22.2 297 32-417 4-318 (335)
14 3fbs_A Oxidoreductase; structu 100.0 4.4E-36 1.5E-40 280.6 23.1 284 33-418 2-294 (297)
15 2q0l_A TRXR, thioredoxin reduc 100.0 2.7E-36 9.1E-41 284.2 21.6 288 33-417 1-310 (311)
16 3r9u_A Thioredoxin reductase; 100.0 5.3E-36 1.8E-40 282.5 21.0 291 32-417 3-313 (315)
17 3cty_A Thioredoxin reductase; 100.0 1E-35 3.6E-40 281.2 21.5 287 32-417 15-317 (319)
18 2a87_A TRXR, TR, thioredoxin r 100.0 1.1E-35 3.7E-40 283.1 20.2 289 31-417 12-317 (335)
19 4fk1_A Putative thioredoxin re 100.0 5.4E-36 1.8E-40 281.2 17.5 287 31-417 4-301 (304)
20 4gcm_A TRXR, thioredoxin reduc 100.0 5E-35 1.7E-39 275.7 22.3 285 33-417 6-307 (312)
21 4a5l_A Thioredoxin reductase; 100.0 1.1E-35 3.7E-40 280.4 17.0 294 31-417 2-313 (314)
22 1fl2_A Alkyl hydroperoxide red 100.0 4.7E-35 1.6E-39 275.6 20.6 287 34-417 2-306 (310)
23 1vdc_A NTR, NADPH dependent th 100.0 1.2E-34 4E-39 275.7 21.4 290 33-419 8-326 (333)
24 1trb_A Thioredoxin reductase; 100.0 3.6E-35 1.2E-39 277.6 17.5 292 32-418 4-316 (320)
25 3d1c_A Flavin-containing putat 100.0 8.6E-34 2.9E-38 273.5 24.2 310 33-418 4-341 (369)
26 4eqs_A Coenzyme A disulfide re 100.0 9.7E-35 3.3E-39 285.6 12.9 292 34-414 1-311 (437)
27 1hyu_A AHPF, alkyl hydroperoxi 100.0 4.5E-33 1.5E-37 279.6 25.0 289 32-417 211-517 (521)
28 4b63_A L-ornithine N5 monooxyg 100.0 4.9E-33 1.7E-37 277.9 23.9 375 26-414 32-485 (501)
29 3oc4_A Oxidoreductase, pyridin 100.0 9.7E-33 3.3E-37 273.1 19.1 286 34-414 3-314 (452)
30 3ics_A Coenzyme A-disulfide re 100.0 2.3E-33 7.9E-38 286.7 14.5 293 31-413 34-352 (588)
31 3klj_A NAD(FAD)-dependent dehy 100.0 5.6E-35 1.9E-39 282.3 1.9 273 32-414 8-294 (385)
32 3ntd_A FAD-dependent pyridine 100.0 1.2E-33 4.1E-38 287.7 11.5 291 33-414 1-338 (565)
33 3iwa_A FAD-dependent pyridine 100.0 2.5E-33 8.6E-38 278.9 12.8 298 33-414 3-329 (472)
34 3kd9_A Coenzyme A disulfide re 100.0 4.1E-33 1.4E-37 275.6 13.4 284 33-414 3-315 (449)
35 2bc0_A NADH oxidase; flavoprot 100.0 7.6E-33 2.6E-37 276.5 15.4 289 33-414 35-361 (490)
36 3lxd_A FAD-dependent pyridine 100.0 1.5E-33 5.1E-38 276.1 9.9 285 32-414 8-321 (415)
37 1mo9_A ORF3; nucleotide bindin 100.0 4.3E-32 1.5E-36 272.9 20.5 305 29-413 39-377 (523)
38 1xhc_A NADH oxidase /nitrite r 100.0 3.6E-34 1.2E-38 275.3 4.8 275 34-414 9-297 (367)
39 3urh_A Dihydrolipoyl dehydroge 100.0 1.4E-32 4.7E-37 274.9 15.5 311 28-414 20-363 (491)
40 2hqm_A GR, grase, glutathione 100.0 4.7E-32 1.6E-36 270.0 18.2 303 32-414 10-347 (479)
41 3s5w_A L-ornithine 5-monooxyge 100.0 3.6E-31 1.2E-35 263.0 24.5 351 32-417 29-449 (463)
42 3l8k_A Dihydrolipoyl dehydroge 100.0 1.6E-32 5.4E-37 272.5 14.7 294 33-414 4-333 (466)
43 2wpf_A Trypanothione reductase 100.0 3.7E-32 1.3E-36 271.4 17.2 309 32-414 6-355 (495)
44 1onf_A GR, grase, glutathione 100.0 4E-32 1.4E-36 271.8 17.3 305 33-414 2-371 (500)
45 3ef6_A Toluene 1,2-dioxygenase 100.0 9.6E-33 3.3E-37 269.6 12.5 283 33-414 2-309 (410)
46 1zmd_A Dihydrolipoyl dehydroge 100.0 6.3E-32 2.2E-36 269.0 18.4 306 32-414 5-345 (474)
47 1dxl_A Dihydrolipoamide dehydr 100.0 6.2E-32 2.1E-36 268.9 17.8 308 31-414 4-342 (470)
48 1ojt_A Surface protein; redox- 100.0 1.6E-31 5.5E-36 266.4 19.9 307 32-413 5-348 (482)
49 2gqw_A Ferredoxin reductase; f 100.0 5.6E-32 1.9E-36 264.0 16.0 281 32-415 6-309 (408)
50 1ebd_A E3BD, dihydrolipoamide 100.0 9.3E-32 3.2E-36 266.4 17.7 302 33-413 3-332 (455)
51 1ges_A Glutathione reductase; 100.0 4.7E-32 1.6E-36 267.9 15.4 298 32-414 3-328 (450)
52 2qae_A Lipoamide, dihydrolipoy 100.0 1.4E-31 4.7E-36 266.1 18.0 305 33-414 2-340 (468)
53 2r9z_A Glutathione amide reduc 100.0 1.5E-31 5.1E-36 265.1 18.1 298 32-414 3-327 (463)
54 1v59_A Dihydrolipoamide dehydr 100.0 1.1E-31 3.7E-36 267.6 16.9 305 32-413 4-349 (478)
55 2vdc_G Glutamate synthase [NAD 100.0 4.5E-32 1.5E-36 267.0 13.9 278 31-417 120-445 (456)
56 1xdi_A RV3303C-LPDA; reductase 100.0 1.2E-31 4E-36 268.6 17.0 308 33-414 2-342 (499)
57 3dk9_A Grase, GR, glutathione 100.0 7.2E-32 2.5E-36 268.9 15.3 301 31-414 18-356 (478)
58 2a8x_A Dihydrolipoyl dehydroge 100.0 7.3E-32 2.5E-36 267.8 15.2 300 33-413 3-333 (464)
59 1fec_A Trypanothione reductase 100.0 3.1E-31 1E-35 264.6 18.9 306 32-414 2-351 (490)
60 2v3a_A Rubredoxin reductase; a 100.0 9.2E-32 3.1E-36 260.7 14.2 283 32-414 3-306 (384)
61 2eq6_A Pyruvate dehydrogenase 100.0 3.1E-31 1.1E-35 263.0 18.0 298 33-413 6-333 (464)
62 3fg2_P Putative rubredoxin red 100.0 1.2E-32 4E-37 268.7 6.9 282 34-414 2-310 (404)
63 2cdu_A NADPH oxidase; flavoenz 100.0 3.4E-32 1.2E-36 269.3 10.2 291 34-414 1-317 (452)
64 4dna_A Probable glutathione re 100.0 1.3E-31 4.5E-36 265.8 14.2 297 33-414 5-331 (463)
65 3lad_A Dihydrolipoamide dehydr 100.0 4E-31 1.4E-35 263.4 17.5 306 32-414 2-343 (476)
66 3ic9_A Dihydrolipoamide dehydr 100.0 1.1E-31 3.9E-36 267.8 13.4 304 33-414 8-338 (492)
67 3o0h_A Glutathione reductase; 100.0 2.6E-31 8.9E-36 265.1 15.8 299 33-415 26-352 (484)
68 3cgb_A Pyridine nucleotide-dis 100.0 6.4E-32 2.2E-36 269.1 11.0 289 33-414 36-353 (480)
69 1zk7_A HGII, reductase, mercur 100.0 9.4E-31 3.2E-35 260.1 17.9 303 32-414 3-334 (467)
70 2yqu_A 2-oxoglutarate dehydrog 100.0 1.1E-30 3.7E-35 258.8 18.2 301 34-414 2-327 (455)
71 1q1r_A Putidaredoxin reductase 100.0 5.3E-32 1.8E-36 265.9 8.2 285 33-414 4-319 (431)
72 1nhp_A NADH peroxidase; oxidor 100.0 3.1E-31 1E-35 262.1 13.2 286 34-413 1-315 (447)
73 3qfa_A Thioredoxin reductase 1 100.0 6.2E-31 2.1E-35 264.1 15.0 305 32-414 31-380 (519)
74 3dgh_A TRXR-1, thioredoxin red 100.0 6.9E-31 2.3E-35 262.1 13.4 302 32-414 8-352 (483)
75 3dgz_A Thioredoxin reductase 2 100.0 5E-31 1.7E-35 263.3 12.2 306 32-415 5-353 (488)
76 1lvl_A Dihydrolipoamide dehydr 100.0 1.7E-29 5.9E-34 250.1 20.9 296 32-413 4-329 (458)
77 4b1b_A TRXR, thioredoxin reduc 100.0 9.2E-31 3.1E-35 261.7 9.7 306 34-415 43-385 (542)
78 3sx6_A Sulfide-quinone reducta 100.0 1.4E-30 4.8E-35 256.5 10.4 292 32-419 3-347 (437)
79 4g6h_A Rotenone-insensitive NA 100.0 4.7E-31 1.6E-35 263.0 4.9 298 28-415 37-400 (502)
80 3h8l_A NADH oxidase; membrane 100.0 2.5E-30 8.7E-35 252.7 9.2 285 33-417 1-337 (409)
81 2x8g_A Thioredoxin glutathione 100.0 9.9E-29 3.4E-33 252.8 18.6 303 32-414 106-459 (598)
82 1m6i_A Programmed cell death p 100.0 1.7E-29 5.8E-34 252.1 5.6 303 30-414 8-352 (493)
83 1gte_A Dihydropyrimidine dehyd 100.0 4.7E-28 1.6E-32 260.4 16.0 279 32-416 186-508 (1025)
84 1lqt_A FPRA; NADP+ derivative, 100.0 1.8E-28 6E-33 241.8 11.6 299 33-417 3-388 (456)
85 3k30_A Histamine dehydrogenase 100.0 4.7E-29 1.6E-33 258.7 7.2 277 30-423 388-684 (690)
86 1cjc_A Protein (adrenodoxin re 99.9 4.4E-28 1.5E-32 239.2 11.1 307 32-417 5-396 (460)
87 1o94_A Tmadh, trimethylamine d 99.9 3.8E-28 1.3E-32 252.8 8.2 281 30-417 386-701 (729)
88 3h28_A Sulfide-quinone reducta 99.9 1.9E-28 6.4E-33 240.9 2.6 287 33-420 2-337 (430)
89 2gag_A Heterotetrameric sarcos 99.9 2E-26 6.7E-31 246.2 17.6 284 32-417 127-445 (965)
90 1ps9_A 2,4-dienoyl-COA reducta 99.9 3E-26 1E-30 237.1 14.2 282 30-411 370-671 (671)
91 3vrd_B FCCB subunit, flavocyto 99.9 3.4E-26 1.2E-30 222.9 7.7 289 34-420 3-328 (401)
92 1y56_A Hypothetical protein PH 99.9 4.1E-25 1.4E-29 220.4 11.5 255 33-416 108-377 (493)
93 3hyw_A Sulfide-quinone reducta 99.9 1.5E-26 5.2E-31 227.0 0.7 287 34-419 3-336 (430)
94 3fpz_A Thiazole biosynthetic e 99.7 7.6E-20 2.6E-24 172.8 -10.8 150 33-237 65-216 (326)
95 2gqf_A Hypothetical protein HI 99.7 2.7E-16 9.2E-21 152.3 11.3 187 33-232 4-259 (401)
96 2ywl_A Thioredoxin reductase r 99.6 7E-16 2.4E-20 132.5 11.0 160 206-418 3-173 (180)
97 2cul_A Glucose-inhibited divis 99.6 1.8E-14 6.1E-19 128.9 12.0 124 33-176 3-128 (232)
98 2e5v_A L-aspartate oxidase; ar 99.5 1.7E-15 5.7E-20 150.0 4.4 194 35-244 1-248 (472)
99 2ywl_A Thioredoxin reductase r 99.4 5.4E-12 1.8E-16 108.0 11.8 118 33-183 1-118 (180)
100 3v76_A Flavoprotein; structura 99.3 6.9E-12 2.4E-16 121.7 13.1 133 32-176 26-190 (417)
101 3oz2_A Digeranylgeranylglycero 99.3 1.7E-11 5.8E-16 118.2 13.6 135 33-173 4-162 (397)
102 3cgv_A Geranylgeranyl reductas 99.3 1.8E-11 6.1E-16 118.4 13.0 134 33-173 4-162 (397)
103 3ces_A MNMG, tRNA uridine 5-ca 99.3 9.9E-12 3.4E-16 125.1 9.8 172 32-235 27-221 (651)
104 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.1E-11 3.7E-16 117.6 8.4 129 33-171 1-163 (342)
105 3fmw_A Oxygenase; mithramycin, 99.2 3.8E-11 1.3E-15 121.3 12.6 135 32-173 48-207 (570)
106 1yvv_A Amine oxidase, flavin-c 99.2 4E-11 1.4E-15 113.2 11.5 130 33-173 2-162 (336)
107 3nix_A Flavoprotein/dehydrogen 99.2 9.6E-11 3.3E-15 114.2 13.6 134 34-173 6-166 (421)
108 3rp8_A Flavoprotein monooxygen 99.2 2.6E-11 8.9E-16 117.8 9.5 136 27-174 17-182 (407)
109 2qa1_A PGAE, polyketide oxygen 99.2 1.6E-10 5.3E-15 115.1 15.2 136 31-173 9-165 (500)
110 3i3l_A Alkylhalidase CMLS; fla 99.2 1.3E-10 4.4E-15 117.7 13.3 140 28-173 18-188 (591)
111 2i0z_A NAD(FAD)-utilizing dehy 99.2 5.6E-11 1.9E-15 116.8 9.9 135 32-175 25-193 (447)
112 2qa2_A CABE, polyketide oxygen 99.2 2.6E-10 9.1E-15 113.4 13.6 135 32-173 11-166 (499)
113 2zxi_A TRNA uridine 5-carboxym 99.1 7.6E-11 2.6E-15 118.3 9.4 173 32-236 26-221 (637)
114 3ihg_A RDME; flavoenzyme, anth 99.1 2.3E-10 7.9E-15 115.1 13.0 136 33-173 5-183 (535)
115 3nlc_A Uncharacterized protein 99.1 6.1E-10 2.1E-14 111.2 15.1 132 33-173 107-277 (549)
116 2gmh_A Electron transfer flavo 99.1 9E-10 3.1E-14 111.7 16.3 141 33-173 35-217 (584)
117 3alj_A 2-methyl-3-hydroxypyrid 99.1 1.3E-10 4.5E-15 111.7 9.6 126 32-173 10-160 (379)
118 1k0i_A P-hydroxybenzoate hydro 99.1 1.6E-10 5.6E-15 111.6 9.5 136 33-175 2-165 (394)
119 2bry_A NEDD9 interacting prote 99.1 6.2E-11 2.1E-15 118.0 6.6 139 32-175 91-232 (497)
120 3dje_A Fructosyl amine: oxygen 99.1 4.1E-10 1.4E-14 110.4 12.0 63 105-177 159-225 (438)
121 3e1t_A Halogenase; flavoprotei 99.1 9.1E-10 3.1E-14 110.1 14.6 136 33-173 7-172 (512)
122 2xdo_A TETX2 protein; tetracyc 99.1 3.1E-10 1.1E-14 109.8 10.8 130 33-174 26-183 (398)
123 2x3n_A Probable FAD-dependent 99.1 2.7E-10 9.3E-15 110.2 9.6 131 33-173 6-166 (399)
124 3cp8_A TRNA uridine 5-carboxym 99.1 1.4E-10 4.8E-15 116.7 7.6 172 32-235 20-215 (641)
125 1y0p_A Fumarate reductase flav 99.1 1.7E-09 5.7E-14 109.7 15.3 139 32-174 125-318 (571)
126 3dme_A Conserved exported prot 99.1 5.6E-10 1.9E-14 106.5 10.8 64 104-174 147-210 (369)
127 3atr_A Conserved archaeal prot 99.0 3.9E-10 1.3E-14 111.1 9.4 136 33-174 6-163 (453)
128 1qo8_A Flavocytochrome C3 fuma 99.0 2.9E-09 9.9E-14 107.7 15.7 139 32-174 120-313 (566)
129 2uzz_A N-methyl-L-tryptophan o 99.0 1.1E-09 3.7E-14 104.8 11.9 63 105-178 147-209 (372)
130 3ps9_A TRNA 5-methylaminomethy 99.0 1.2E-09 4E-14 113.0 12.9 61 104-174 414-474 (676)
131 1rp0_A ARA6, thiazole biosynth 99.0 2.6E-09 8.9E-14 98.3 13.7 139 32-171 38-189 (284)
132 2vou_A 2,6-dihydroxypyridine h 99.0 1.6E-09 5.5E-14 104.7 12.5 130 33-174 5-154 (397)
133 3pvc_A TRNA 5-methylaminomethy 99.0 2.4E-09 8.4E-14 110.8 14.6 61 104-174 409-470 (689)
134 3c96_A Flavin-containing monoo 99.0 3.1E-09 1.1E-13 103.2 13.7 136 33-174 4-170 (410)
135 3jsk_A Cypbp37 protein; octame 99.0 1.5E-09 5.2E-14 101.2 10.3 141 33-173 79-251 (344)
136 1ryi_A Glycine oxidase; flavop 99.0 1.3E-09 4.5E-14 104.7 10.1 62 102-174 159-220 (382)
137 2dkh_A 3-hydroxybenzoate hydro 99.0 4.9E-09 1.7E-13 107.5 14.6 141 33-173 32-211 (639)
138 3nyc_A D-arginine dehydrogenas 99.0 1.4E-09 4.7E-14 104.4 9.5 59 104-173 151-209 (381)
139 2r0c_A REBC; flavin adenine di 99.0 6.1E-09 2.1E-13 104.9 14.6 133 33-173 26-196 (549)
140 4hb9_A Similarities with proba 98.9 2.2E-09 7.4E-14 104.0 9.8 128 35-174 3-167 (412)
141 1y56_B Sarcosine oxidase; dehy 98.9 9.5E-09 3.3E-13 98.6 14.1 59 104-173 146-205 (382)
142 4dgk_A Phytoene dehydrogenase; 98.9 4E-09 1.4E-13 105.1 11.4 39 33-71 1-39 (501)
143 2oln_A NIKD protein; flavoprot 98.9 8.7E-09 3E-13 99.5 12.7 58 105-173 151-208 (397)
144 4at0_A 3-ketosteroid-delta4-5a 98.9 1.4E-08 4.7E-13 101.5 14.2 61 108-173 203-264 (510)
145 2gf3_A MSOX, monomeric sarcosi 98.9 1E-08 3.5E-13 98.6 12.1 59 105-174 148-206 (389)
146 1pn0_A Phenol 2-monooxygenase; 98.9 2E-08 7E-13 103.2 14.6 141 33-173 8-230 (665)
147 2aqj_A Tryptophan halogenase, 98.9 3.2E-09 1.1E-13 106.9 8.4 62 104-174 162-223 (538)
148 1d4d_A Flavocytochrome C fumar 98.9 2.6E-08 8.7E-13 100.8 14.8 138 33-174 126-318 (572)
149 2qcu_A Aerobic glycerol-3-phos 98.9 2.6E-08 8.9E-13 99.2 14.6 65 105-174 147-211 (501)
150 2gjc_A Thiazole biosynthetic e 98.9 1.6E-08 5.5E-13 93.7 12.1 105 33-137 65-177 (326)
151 2gag_B Heterotetrameric sarcos 98.8 1.4E-08 4.7E-13 98.3 11.8 60 104-173 171-230 (405)
152 2weu_A Tryptophan 5-halogenase 98.8 9.7E-09 3.3E-13 102.7 10.2 62 104-174 170-231 (511)
153 3da1_A Glycerol-3-phosphate de 98.8 1.7E-08 5.9E-13 101.7 11.9 66 104-173 167-232 (561)
154 3k7m_X 6-hydroxy-L-nicotine ox 98.8 3.1E-08 1.1E-12 96.7 12.0 39 33-71 1-39 (431)
155 3ka7_A Oxidoreductase; structu 98.8 2.5E-08 8.6E-13 97.1 10.8 39 34-72 1-39 (425)
156 2e4g_A Tryptophan halogenase; 98.8 1.4E-08 4.7E-13 102.4 8.9 61 104-173 191-252 (550)
157 2pyx_A Tryptophan halogenase; 98.8 3.3E-08 1.1E-12 99.1 11.6 62 104-174 172-234 (526)
158 3kkj_A Amine oxidase, flavin-c 98.7 1.4E-08 4.9E-13 92.2 7.3 46 34-79 3-48 (336)
159 3c4n_A Uncharacterized protein 98.7 1.7E-08 5.9E-13 97.7 8.0 130 33-173 36-236 (405)
160 3nrn_A Uncharacterized protein 98.7 2.3E-08 8E-13 97.3 8.9 40 34-73 1-40 (421)
161 2v3a_A Rubredoxin reductase; a 98.7 7.9E-08 2.7E-12 92.3 11.4 101 33-177 145-245 (384)
162 3i6d_A Protoporphyrinogen oxid 98.7 1.7E-08 5.7E-13 99.7 6.7 39 33-71 5-49 (470)
163 2yqu_A 2-oxoglutarate dehydrog 98.7 8.4E-08 2.9E-12 94.4 11.4 100 34-178 168-267 (455)
164 1pj5_A N,N-dimethylglycine oxi 98.7 1.3E-07 4.4E-12 100.0 13.1 60 104-173 148-207 (830)
165 2wdq_A Succinate dehydrogenase 98.7 9.8E-08 3.3E-12 96.7 11.6 139 33-174 7-207 (588)
166 3nks_A Protoporphyrinogen oxid 98.6 8.4E-08 2.9E-12 94.9 10.1 40 33-72 2-43 (477)
167 2eq6_A Pyruvate dehydrogenase 98.6 1.7E-07 6E-12 92.3 11.8 104 34-178 170-274 (464)
168 1kf6_A Fumarate reductase flav 98.6 4.8E-07 1.7E-11 91.8 15.0 140 33-176 5-200 (602)
169 2h88_A Succinate dehydrogenase 98.6 3.9E-07 1.3E-11 92.5 13.7 140 32-175 17-219 (621)
170 1ebd_A E3BD, dihydrolipoamide 98.6 3.5E-07 1.2E-11 89.9 12.8 103 34-178 171-273 (455)
171 1ges_A Glutathione reductase; 98.6 2.6E-07 8.9E-12 90.7 11.3 101 34-178 168-268 (450)
172 3axb_A Putative oxidoreductase 98.6 1.4E-07 4.7E-12 92.6 9.3 62 104-174 178-255 (448)
173 2bs2_A Quinol-fumarate reducta 98.6 5.1E-07 1.7E-11 92.3 13.7 66 106-175 157-222 (660)
174 1nhp_A NADH peroxidase; oxidor 98.6 1.6E-07 5.6E-12 92.0 9.8 101 33-178 149-249 (447)
175 1v59_A Dihydrolipoamide dehydr 98.6 3.5E-07 1.2E-11 90.5 12.2 107 34-178 184-290 (478)
176 2rgh_A Alpha-glycerophosphate 98.6 2.6E-07 8.8E-12 93.4 11.4 65 105-173 186-250 (571)
177 3lxd_A FAD-dependent pyridine 98.6 4E-07 1.4E-11 88.3 12.4 102 33-177 152-253 (415)
178 3c4a_A Probable tryptophan hyd 98.5 2.4E-08 8.3E-13 95.8 3.2 119 34-174 1-144 (381)
179 1chu_A Protein (L-aspartate ox 98.5 1.6E-07 5.4E-12 94.2 9.1 37 33-70 8-44 (540)
180 2r9z_A Glutathione amide reduc 98.5 3.9E-07 1.3E-11 89.7 11.8 100 34-178 167-267 (463)
181 3fg2_P Putative rubredoxin red 98.5 3.8E-07 1.3E-11 88.2 11.1 102 33-177 142-243 (404)
182 1rp0_A ARA6, thiazole biosynth 98.5 7.7E-08 2.6E-12 88.4 5.1 191 205-419 40-278 (284)
183 2gqw_A Ferredoxin reductase; f 98.5 4.6E-07 1.6E-11 87.7 10.6 97 33-177 145-241 (408)
184 1onf_A GR, grase, glutathione 98.5 7.6E-07 2.6E-11 88.6 12.3 101 33-177 176-277 (500)
185 4b1b_A TRXR, thioredoxin reduc 98.5 8.2E-07 2.8E-11 88.7 12.5 100 34-179 224-323 (542)
186 1q1r_A Putidaredoxin reductase 98.5 5.7E-07 2E-11 87.7 11.1 102 33-177 149-252 (431)
187 3ef6_A Toluene 1,2-dioxygenase 98.5 1.8E-07 6.1E-12 90.7 7.1 101 33-177 143-243 (410)
188 1zmd_A Dihydrolipoyl dehydroge 98.5 7.3E-07 2.5E-11 88.1 11.5 107 34-178 179-285 (474)
189 1jnr_A Adenylylsulfate reducta 98.5 1.9E-06 6.3E-11 88.3 14.7 144 32-178 21-223 (643)
190 1xdi_A RV3303C-LPDA; reductase 98.5 9.8E-07 3.4E-11 87.8 12.4 100 34-178 183-282 (499)
191 1zk7_A HGII, reductase, mercur 98.5 9.1E-07 3.1E-11 87.2 11.8 97 34-177 177-273 (467)
192 3iwa_A FAD-dependent pyridine 98.4 8E-07 2.7E-11 87.8 11.3 101 33-177 159-260 (472)
193 2cdu_A NADPH oxidase; flavoenz 98.4 9.6E-07 3.3E-11 86.7 11.5 102 33-178 149-250 (452)
194 2a8x_A Dihydrolipoyl dehydroge 98.4 1.3E-06 4.4E-11 86.1 12.5 103 34-178 172-274 (464)
195 1fec_A Trypanothione reductase 98.4 9.2E-07 3.1E-11 87.7 11.3 100 34-177 188-290 (490)
196 2wpf_A Trypanothione reductase 98.4 9.8E-07 3.4E-11 87.6 11.4 101 34-178 192-295 (495)
197 1ojt_A Surface protein; redox- 98.4 4.3E-07 1.5E-11 89.9 8.8 105 33-178 185-289 (482)
198 3oc4_A Oxidoreductase, pyridin 98.4 1.7E-06 5.7E-11 85.0 12.8 100 34-178 148-247 (452)
199 4gut_A Lysine-specific histone 98.4 1.3E-06 4.3E-11 91.0 12.4 40 31-70 334-373 (776)
200 2hqm_A GR, grase, glutathione 98.4 1.2E-06 4.2E-11 86.6 11.6 102 34-177 186-287 (479)
201 3gyx_A Adenylylsulfate reducta 98.4 9.9E-07 3.4E-11 90.2 11.2 69 106-177 165-237 (662)
202 1mo9_A ORF3; nucleotide bindin 98.4 1.2E-06 4E-11 87.7 11.5 101 34-177 215-318 (523)
203 3urh_A Dihydrolipoyl dehydroge 98.4 2.1E-06 7.3E-11 85.1 13.3 105 34-178 199-303 (491)
204 2bc0_A NADH oxidase; flavoprot 98.4 8.9E-07 3.1E-11 87.8 10.1 101 33-178 194-294 (490)
205 2qae_A Lipoamide, dihydrolipoy 98.4 2.1E-06 7E-11 84.7 12.5 104 34-178 175-279 (468)
206 3ic9_A Dihydrolipoamide dehydr 98.4 2.1E-06 7E-11 85.2 12.5 104 33-178 174-277 (492)
207 3cgb_A Pyridine nucleotide-dis 98.4 1.1E-06 3.6E-11 87.0 10.4 99 33-177 186-284 (480)
208 1xhc_A NADH oxidase /nitrite r 98.4 4.4E-07 1.5E-11 86.5 7.3 93 34-177 144-236 (367)
209 1lvl_A Dihydrolipoamide dehydr 98.4 6.1E-07 2.1E-11 88.2 8.5 100 34-178 172-271 (458)
210 3ntd_A FAD-dependent pyridine 98.4 1.5E-06 5E-11 87.9 11.5 101 34-177 152-269 (565)
211 1m6i_A Programmed cell death p 98.4 1.5E-06 5E-11 86.3 11.1 101 33-177 180-284 (493)
212 3lad_A Dihydrolipoamide dehydr 98.4 2.6E-06 8.8E-11 84.2 12.5 103 34-178 181-283 (476)
213 3o0h_A Glutathione reductase; 98.3 1.8E-06 6.3E-11 85.4 11.2 100 34-178 192-291 (484)
214 3dgh_A TRXR-1, thioredoxin red 98.3 3.9E-06 1.3E-10 83.1 13.3 105 34-178 188-292 (483)
215 1dxl_A Dihydrolipoamide dehydr 98.3 1.7E-06 5.7E-11 85.4 10.2 105 34-178 178-282 (470)
216 3dgz_A Thioredoxin reductase 2 98.3 5.9E-06 2E-10 81.9 14.1 105 34-178 186-290 (488)
217 3hyw_A Sulfide-quinone reducta 98.3 1.1E-06 3.8E-11 85.6 8.5 104 204-355 2-110 (430)
218 3dk9_A Grase, GR, glutathione 98.3 3.6E-06 1.2E-10 83.2 12.1 107 34-178 188-296 (478)
219 4gde_A UDP-galactopyranose mut 98.3 4.6E-07 1.6E-11 90.4 5.6 42 32-73 9-51 (513)
220 1sez_A Protoporphyrinogen oxid 98.3 5.8E-07 2E-11 89.5 5.8 45 31-75 11-55 (504)
221 4dna_A Probable glutathione re 98.3 3.5E-06 1.2E-10 82.9 11.1 101 33-178 170-271 (463)
222 1trb_A Thioredoxin reductase; 98.3 3.2E-06 1.1E-10 78.7 10.3 104 33-177 145-249 (320)
223 4eqs_A Coenzyme A disulfide re 98.3 1.4E-06 4.9E-11 85.0 8.2 96 33-177 147-242 (437)
224 1v0j_A UDP-galactopyranose mut 98.2 1.2E-06 4.1E-11 84.5 6.8 46 32-77 6-52 (399)
225 3s5w_A L-ornithine 5-monooxyge 98.2 1.5E-05 5.1E-10 78.4 14.7 132 33-176 227-378 (463)
226 2b9w_A Putative aminooxidase; 98.2 1.9E-06 6.5E-11 83.7 7.7 48 32-79 5-53 (424)
227 2e1m_A L-glutamate oxidase; L- 98.2 1E-06 3.5E-11 83.6 5.5 48 28-75 39-87 (376)
228 4g6h_A Rotenone-insensitive NA 98.2 5.3E-06 1.8E-10 82.3 10.8 99 34-171 218-330 (502)
229 3qfa_A Thioredoxin reductase 1 98.2 1.6E-05 5.4E-10 79.3 14.3 106 34-178 211-318 (519)
230 2bcg_G Secretory pathway GDP d 98.2 1.3E-06 4.6E-11 85.6 6.1 44 32-75 10-53 (453)
231 3ics_A Coenzyme A-disulfide re 98.2 3.4E-06 1.1E-10 85.7 9.2 98 33-177 187-284 (588)
232 2zbw_A Thioredoxin reductase; 98.2 3.9E-06 1.3E-10 78.6 9.0 103 33-177 152-254 (335)
233 3hdq_A UDP-galactopyranose mut 98.2 1.6E-06 5.6E-11 82.9 6.3 45 31-75 27-71 (397)
234 3klj_A NAD(FAD)-dependent dehy 98.2 4.3E-06 1.5E-10 80.1 9.1 107 204-357 9-119 (385)
235 3d1c_A Flavin-containing putat 98.2 5.9E-06 2E-10 78.5 9.5 107 33-177 166-274 (369)
236 2cul_A Glucose-inhibited divis 98.2 3.3E-06 1.1E-10 74.9 7.2 175 205-415 4-231 (232)
237 1rsg_A FMS1 protein; FAD bindi 98.2 1.4E-06 4.7E-11 87.1 5.2 42 33-74 8-50 (516)
238 1s3e_A Amine oxidase [flavin-c 98.1 2.5E-06 8.6E-11 85.3 6.9 41 32-72 3-43 (520)
239 3vrd_B FCCB subunit, flavocyto 98.1 3.6E-06 1.2E-10 81.2 7.8 105 203-356 1-110 (401)
240 3sx6_A Sulfide-quinone reducta 98.1 5.4E-06 1.9E-10 80.9 9.1 104 205-356 5-114 (437)
241 3kd9_A Coenzyme A disulfide re 98.1 5.5E-06 1.9E-10 81.2 9.0 99 33-177 148-246 (449)
242 3ab1_A Ferredoxin--NADP reduct 98.1 7.5E-06 2.6E-10 77.6 9.6 103 33-177 163-265 (360)
243 2iid_A L-amino-acid oxidase; f 98.1 2.9E-06 9.8E-11 84.3 6.2 43 31-73 31-73 (498)
244 3l8k_A Dihydrolipoyl dehydroge 98.1 1.4E-05 4.7E-10 78.7 10.4 103 34-178 173-275 (466)
245 2ivd_A PPO, PPOX, protoporphyr 98.1 4E-06 1.4E-10 82.8 6.5 42 33-74 16-57 (478)
246 3h8l_A NADH oxidase; membrane 98.1 7.7E-06 2.6E-10 79.0 8.3 104 205-356 2-115 (409)
247 4dsg_A UDP-galactopyranose mut 98.0 6.2E-06 2.1E-10 81.6 7.5 52 32-83 8-61 (484)
248 2x8g_A Thioredoxin glutathione 98.0 4.6E-05 1.6E-09 77.5 14.1 104 34-177 287-397 (598)
249 2yg5_A Putrescine oxidase; oxi 98.0 4E-06 1.4E-10 82.2 5.9 41 33-73 5-45 (453)
250 3lov_A Protoporphyrinogen oxid 98.0 4.1E-06 1.4E-10 82.6 6.0 42 33-74 4-47 (475)
251 3itj_A Thioredoxin reductase 1 98.0 1.6E-05 5.3E-10 74.4 9.6 100 33-177 173-273 (338)
252 2vvm_A Monoamine oxidase N; FA 98.0 4.3E-06 1.5E-10 83.0 5.9 40 34-73 40-79 (495)
253 3h28_A Sulfide-quinone reducta 98.0 1.7E-05 5.7E-10 77.3 9.5 105 205-357 3-112 (430)
254 2bi7_A UDP-galactopyranose mut 98.0 5.2E-06 1.8E-10 79.5 5.7 45 33-77 3-47 (384)
255 1i8t_A UDP-galactopyranose mut 98.0 4.8E-06 1.7E-10 79.2 5.4 47 33-79 1-47 (367)
256 3fbs_A Oxidoreductase; structu 98.0 1.4E-05 4.8E-10 73.3 8.0 33 205-237 3-35 (297)
257 1b37_A Protein (polyamine oxid 98.0 8.9E-06 3E-10 80.2 6.9 47 32-78 3-50 (472)
258 2jae_A L-amino acid oxidase; o 98.0 6.1E-06 2.1E-10 81.8 5.6 41 32-72 10-50 (489)
259 3f8d_A Thioredoxin reductase ( 98.0 3E-05 1E-09 71.9 9.8 100 33-177 154-253 (323)
260 2q7v_A Thioredoxin reductase; 97.9 2.2E-05 7.5E-10 73.2 8.9 99 34-177 153-251 (325)
261 1fl2_A Alkyl hydroperoxide red 97.9 4.9E-05 1.7E-09 70.2 11.0 100 33-177 144-244 (310)
262 2q0l_A TRXR, thioredoxin reduc 97.9 2.7E-05 9.1E-10 72.1 9.1 102 33-178 143-244 (311)
263 3r9u_A Thioredoxin reductase; 97.9 3.4E-05 1.2E-09 71.3 9.5 101 33-178 147-247 (315)
264 1d5t_A Guanine nucleotide diss 97.9 1.2E-05 4E-10 78.4 6.3 44 32-75 5-48 (433)
265 3cty_A Thioredoxin reductase; 97.9 5.5E-05 1.9E-09 70.2 10.7 100 33-177 155-254 (319)
266 2a87_A TRXR, TR, thioredoxin r 97.9 2.1E-05 7.1E-10 73.7 7.5 101 33-178 155-255 (335)
267 1vdc_A NTR, NADPH dependent th 97.9 3E-05 1E-09 72.5 8.4 103 33-178 159-262 (333)
268 3ihm_A Styrene monooxygenase A 97.8 7.9E-06 2.7E-10 79.5 3.9 35 32-66 21-55 (430)
269 1c0p_A D-amino acid oxidase; a 97.8 1.4E-05 5E-10 75.7 5.3 35 32-66 5-39 (363)
270 3lzw_A Ferredoxin--NADP reduct 97.8 5.2E-05 1.8E-09 70.6 9.1 100 33-178 154-253 (332)
271 3p1w_A Rabgdi protein; GDI RAB 97.8 1.4E-05 4.7E-10 78.1 4.8 44 32-75 19-62 (475)
272 3g5s_A Methylenetetrahydrofola 97.8 3E-05 1E-09 73.0 6.0 36 33-68 1-36 (443)
273 3k30_A Histamine dehydrogenase 97.7 2.3E-05 7.9E-10 81.0 5.6 100 34-176 524-625 (690)
274 4a9w_A Monooxygenase; baeyer-v 97.7 3.2E-05 1.1E-09 72.8 6.0 33 205-237 4-36 (357)
275 4fk1_A Putative thioredoxin re 97.7 7.2E-05 2.5E-09 69.0 8.2 32 206-237 8-39 (304)
276 2z3y_A Lysine-specific histone 97.7 4.6E-05 1.6E-09 78.3 6.6 44 31-74 105-148 (662)
277 2xag_A Lysine-specific histone 97.6 5.4E-05 1.9E-09 79.3 6.8 44 31-74 276-319 (852)
278 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00021 7.3E-09 71.2 10.6 100 33-177 355-455 (521)
279 3v76_A Flavoprotein; structura 97.6 8.1E-05 2.8E-09 71.9 7.0 34 204-237 27-60 (417)
280 3pl8_A Pyranose 2-oxidase; sub 97.6 4.5E-05 1.5E-09 77.6 4.7 41 32-72 45-85 (623)
281 2vdc_G Glutamate synthase [NAD 97.6 9.9E-05 3.4E-09 72.2 7.0 105 33-176 264-379 (456)
282 3g3e_A D-amino-acid oxidase; F 97.5 3.6E-05 1.2E-09 72.6 3.4 33 34-66 1-39 (351)
283 2gjc_A Thiazole biosynthetic e 97.5 0.00025 8.5E-09 65.6 8.7 32 206-237 67-100 (326)
284 2xve_A Flavin-containing monoo 97.5 0.00016 5.5E-09 70.9 7.8 85 33-180 197-281 (464)
285 2bry_A NEDD9 interacting prote 97.5 0.0002 6.7E-09 71.0 8.1 35 203-237 91-125 (497)
286 4a5l_A Thioredoxin reductase; 97.5 0.00033 1.1E-08 64.6 9.2 102 33-178 152-253 (314)
287 3nlc_A Uncharacterized protein 97.5 0.00015 5E-09 72.4 6.8 34 204-237 107-140 (549)
288 2gag_A Heterotetrameric sarcos 97.4 0.00042 1.4E-08 74.1 10.2 99 34-177 285-385 (965)
289 4gcm_A TRXR, thioredoxin reduc 97.4 0.00053 1.8E-08 63.3 9.6 34 34-67 146-179 (312)
290 3alj_A 2-methyl-3-hydroxypyrid 97.4 0.00037 1.3E-08 66.4 8.3 142 204-356 11-162 (379)
291 2gqf_A Hypothetical protein HI 97.4 0.00039 1.3E-08 66.8 8.2 33 205-237 5-37 (401)
292 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00028 9.5E-09 68.9 7.2 35 32-66 211-246 (447)
293 3gwf_A Cyclohexanone monooxyge 97.4 0.00026 8.9E-09 70.8 7.1 35 33-67 178-212 (540)
294 3t37_A Probable dehydrogenase; 97.3 9E-05 3.1E-09 74.0 3.3 37 31-67 15-52 (526)
295 3jsk_A Cypbp37 protein; octame 97.3 0.00035 1.2E-08 65.0 6.2 33 205-237 80-114 (344)
296 1o94_A Tmadh, trimethylamine d 97.3 0.00023 8E-09 73.9 5.5 105 34-177 529-648 (729)
297 1kdg_A CDH, cellobiose dehydro 97.2 0.0002 6.7E-09 71.9 4.6 36 32-67 6-41 (546)
298 4ap3_A Steroid monooxygenase; 97.2 0.00029 9.8E-09 70.6 5.7 33 205-237 22-54 (549)
299 1cjc_A Protein (adrenodoxin re 97.2 0.0012 4E-08 64.6 9.8 34 33-66 145-199 (460)
300 2i0z_A NAD(FAD)-utilizing dehy 97.2 0.00052 1.8E-08 67.0 7.2 33 205-237 27-59 (447)
301 1lqt_A FPRA; NADP+ derivative, 97.2 0.00099 3.4E-08 65.1 9.1 137 33-172 147-325 (456)
302 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00044 1.5E-08 71.1 6.9 127 33-176 494-629 (671)
303 1vg0_A RAB proteins geranylger 97.2 0.0003 1E-08 71.0 5.4 44 33-76 8-51 (650)
304 2x3n_A Probable FAD-dependent 97.1 0.0028 9.4E-08 60.7 11.5 33 205-237 7-39 (399)
305 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00016 5.5E-09 73.9 2.2 37 32-68 55-100 (721)
306 3uox_A Otemo; baeyer-villiger 97.1 0.0026 8.8E-08 63.6 10.6 33 205-237 10-42 (545)
307 3qvp_A Glucose oxidase; oxidor 97.0 0.00031 1.1E-08 70.6 3.6 36 31-66 17-53 (583)
308 1ju2_A HydroxynitrIle lyase; f 97.0 0.00026 8.8E-09 70.8 2.7 36 32-68 25-60 (536)
309 3q9t_A Choline dehydrogenase a 96.9 0.00038 1.3E-08 70.0 3.5 36 32-67 5-41 (577)
310 3nix_A Flavoprotein/dehydrogen 96.9 0.0027 9.1E-08 61.2 9.4 33 205-237 6-38 (421)
311 2xdo_A TETX2 protein; tetracyc 96.9 0.0052 1.8E-07 58.8 10.8 34 204-237 26-59 (398)
312 3ces_A MNMG, tRNA uridine 5-ca 96.9 0.005 1.7E-07 62.1 10.9 33 205-237 29-61 (651)
313 3dfz_A SIRC, precorrin-2 dehyd 96.9 0.001 3.5E-08 57.8 5.2 37 200-236 27-63 (223)
314 1gte_A Dihydropyrimidine dehyd 96.9 0.0057 1.9E-07 65.9 11.9 99 34-170 333-439 (1025)
315 3fmw_A Oxygenase; mithramycin, 96.9 0.00046 1.6E-08 69.5 3.2 33 205-237 50-82 (570)
316 2vou_A 2,6-dihydroxypyridine h 96.8 0.0042 1.4E-07 59.4 9.8 35 204-238 5-39 (397)
317 1y0p_A Fumarate reductase flav 96.8 0.0048 1.6E-07 62.1 10.4 33 205-237 127-159 (571)
318 1coy_A Cholesterol oxidase; ox 96.8 0.00091 3.1E-08 66.3 4.8 37 31-67 9-45 (507)
319 1n4w_A CHOD, cholesterol oxida 96.8 0.00095 3.3E-08 66.1 4.9 37 33-69 5-41 (504)
320 2zxi_A TRNA uridine 5-carboxym 96.7 0.0019 6.4E-08 65.0 6.4 33 205-237 28-60 (637)
321 3i3l_A Alkylhalidase CMLS; fla 96.7 0.0027 9.2E-08 64.1 7.7 34 204-237 23-56 (591)
322 4hb9_A Similarities with proba 96.7 0.0031 1E-07 60.3 7.5 33 205-237 2-34 (412)
323 3rp8_A Flavoprotein monooxygen 96.7 0.0011 3.6E-08 63.8 4.0 36 202-237 21-56 (407)
324 1k0i_A P-hydroxybenzoate hydro 96.6 0.0085 2.9E-07 57.1 10.3 33 205-237 3-35 (394)
325 1yvv_A Amine oxidase, flavin-c 96.6 0.0023 8E-08 59.4 6.1 33 205-237 3-35 (336)
326 3nrn_A Uncharacterized protein 96.6 0.012 4.2E-07 56.5 11.4 33 205-237 1-33 (421)
327 1gpe_A Protein (glucose oxidas 96.6 0.00095 3.2E-08 67.4 3.4 37 32-68 23-60 (587)
328 3fim_B ARYL-alcohol oxidase; A 96.6 0.00062 2.1E-08 68.2 2.0 36 33-68 2-38 (566)
329 3qj4_A Renalase; FAD/NAD(P)-bi 96.5 0.0036 1.2E-07 58.5 6.6 32 206-237 3-37 (342)
330 3e1t_A Halogenase; flavoprotei 96.4 0.0028 9.4E-08 63.0 5.5 33 205-237 8-40 (512)
331 1w4x_A Phenylacetone monooxyge 96.4 0.0071 2.4E-07 60.4 8.5 33 205-237 17-49 (542)
332 1qo8_A Flavocytochrome C3 fuma 96.4 0.0052 1.8E-07 61.8 7.5 33 205-237 122-154 (566)
333 3fwz_A Inner membrane protein 96.4 0.0054 1.8E-07 49.2 6.2 36 31-66 5-40 (140)
334 3cp8_A TRNA uridine 5-carboxym 96.4 0.0059 2E-07 61.6 7.7 33 205-237 22-54 (641)
335 1y56_B Sarcosine oxidase; dehy 96.4 0.005 1.7E-07 58.4 6.9 33 205-237 6-38 (382)
336 3atr_A Conserved archaeal prot 96.4 0.0093 3.2E-07 58.1 8.8 33 205-237 7-39 (453)
337 2jbv_A Choline oxidase; alcoho 96.3 0.0017 5.9E-08 64.9 3.5 36 33-68 13-49 (546)
338 1ryi_A Glycine oxidase; flavop 96.3 0.0043 1.5E-07 58.8 6.0 33 205-237 18-50 (382)
339 1d4d_A Flavocytochrome C fumar 96.2 0.014 5E-07 58.6 9.1 34 204-237 126-159 (572)
340 2gag_B Heterotetrameric sarcos 96.1 0.0071 2.4E-07 57.7 6.4 33 205-237 22-56 (405)
341 2qa2_A CABE, polyketide oxygen 96.1 0.008 2.7E-07 59.4 6.8 34 204-237 12-45 (499)
342 3cgv_A Geranylgeranyl reductas 96.1 0.008 2.7E-07 57.2 6.5 32 206-237 6-37 (397)
343 2aqj_A Tryptophan halogenase, 96.1 0.019 6.6E-07 57.2 9.5 34 204-237 5-41 (538)
344 3pvc_A TRNA 5-methylaminomethy 96.1 0.022 7.7E-07 58.6 10.1 34 204-237 264-297 (689)
345 4at0_A 3-ketosteroid-delta4-5a 96.0 0.0097 3.3E-07 59.0 7.0 32 206-237 43-74 (510)
346 3llv_A Exopolyphosphatase-rela 95.9 0.01 3.4E-07 47.5 5.4 35 32-66 5-39 (141)
347 2qa1_A PGAE, polyketide oxygen 95.9 0.0011 3.9E-08 65.5 -0.3 34 204-237 11-44 (500)
348 3ihg_A RDME; flavoenzyme, anth 95.9 0.016 5.6E-07 57.7 8.1 33 205-237 6-38 (535)
349 4b63_A L-ornithine N5 monooxyg 95.9 0.032 1.1E-06 55.0 10.1 35 32-66 245-281 (501)
350 3ps9_A TRNA 5-methylaminomethy 95.9 0.026 9E-07 57.9 9.6 34 204-237 272-305 (676)
351 2pyx_A Tryptophan halogenase; 95.6 0.029 9.9E-07 55.7 8.3 34 204-237 7-52 (526)
352 2g1u_A Hypothetical protein TM 95.5 0.012 4.1E-07 48.0 4.5 34 33-66 19-52 (155)
353 2weu_A Tryptophan 5-halogenase 95.5 0.021 7.3E-07 56.4 7.1 33 205-237 3-38 (511)
354 1chu_A Protein (L-aspartate ox 95.5 0.073 2.5E-06 53.0 10.7 32 205-237 9-40 (540)
355 2wdq_A Succinate dehydrogenase 95.4 0.093 3.2E-06 52.8 11.6 32 206-237 9-40 (588)
356 2e5v_A L-aspartate oxidase; ar 95.4 0.04 1.4E-06 53.9 8.3 31 206-236 1-31 (472)
357 1id1_A Putative potassium chan 95.3 0.025 8.7E-07 45.9 5.6 34 33-66 3-36 (153)
358 1kf6_A Fumarate reductase flav 95.2 0.13 4.5E-06 51.8 11.9 32 206-237 7-40 (602)
359 3ic5_A Putative saccharopine d 95.2 0.014 4.9E-07 44.7 3.7 34 33-66 5-39 (118)
360 2gmh_A Electron transfer flavo 95.2 0.019 6.4E-07 57.9 5.5 33 205-237 36-74 (584)
361 2hmt_A YUAA protein; RCK, KTN, 95.2 0.024 8.1E-07 45.2 5.1 34 33-66 6-39 (144)
362 3kkj_A Amine oxidase, flavin-c 95.2 0.0099 3.4E-07 52.8 3.0 42 379-420 289-332 (336)
363 2h88_A Succinate dehydrogenase 95.1 0.15 5.3E-06 51.5 11.9 32 206-237 20-51 (621)
364 1lss_A TRK system potassium up 95.0 0.02 6.9E-07 45.3 4.3 33 34-66 5-37 (140)
365 2bs2_A Quinol-fumarate reducta 94.9 0.098 3.4E-06 53.3 9.9 32 206-237 7-38 (660)
366 1f0y_A HCDH, L-3-hydroxyacyl-C 94.9 0.023 7.8E-07 52.0 4.6 36 31-66 13-48 (302)
367 1pj5_A N,N-dimethylglycine oxi 94.8 0.02 6.7E-07 60.4 4.7 33 205-237 5-38 (830)
368 3c85_A Putative glutathione-re 94.4 0.054 1.8E-06 45.3 5.7 33 34-66 40-73 (183)
369 2dkh_A 3-hydroxybenzoate hydro 94.4 0.021 7.1E-07 58.3 3.6 33 205-237 33-66 (639)
370 4e12_A Diketoreductase; oxidor 94.4 0.035 1.2E-06 50.3 4.7 35 32-66 3-37 (283)
371 3hwr_A 2-dehydropantoate 2-red 94.3 0.04 1.4E-06 50.9 4.9 37 200-237 15-51 (318)
372 1y56_A Hypothetical protein PH 94.2 0.052 1.8E-06 53.4 5.7 49 117-177 267-315 (493)
373 1pjq_A CYSG, siroheme synthase 94.1 0.04 1.4E-06 53.6 4.5 36 201-236 9-44 (457)
374 4dgk_A Phytoene dehydrogenase; 94.0 0.02 7E-07 56.3 2.4 33 205-237 2-34 (501)
375 3vtf_A UDP-glucose 6-dehydroge 93.9 0.047 1.6E-06 52.4 4.7 39 28-66 16-54 (444)
376 2dpo_A L-gulonate 3-dehydrogen 93.8 0.053 1.8E-06 49.9 4.7 35 32-66 5-39 (319)
377 3lk7_A UDP-N-acetylmuramoylala 93.7 0.11 3.6E-06 50.5 6.8 37 201-237 6-42 (451)
378 2g1u_A Hypothetical protein TM 93.6 0.051 1.7E-06 44.2 3.7 38 200-237 15-52 (155)
379 3dfz_A SIRC, precorrin-2 dehyd 93.6 0.07 2.4E-06 46.2 4.7 34 33-66 31-64 (223)
380 3l4b_C TRKA K+ channel protien 93.6 0.064 2.2E-06 46.3 4.6 32 35-66 2-33 (218)
381 4ffl_A PYLC; amino acid, biosy 93.4 0.063 2.2E-06 50.4 4.6 35 33-67 1-35 (363)
382 3ihm_A Styrene monooxygenase A 93.4 0.035 1.2E-06 53.6 2.8 34 204-237 22-55 (430)
383 3k6j_A Protein F01G10.3, confi 93.3 0.076 2.6E-06 51.3 5.0 39 28-66 49-87 (460)
384 3ado_A Lambda-crystallin; L-gu 93.3 0.075 2.6E-06 48.8 4.7 34 33-66 6-39 (319)
385 1kyq_A Met8P, siroheme biosynt 93.3 0.051 1.7E-06 48.7 3.4 37 201-237 10-46 (274)
386 3k96_A Glycerol-3-phosphate de 93.2 0.088 3E-06 49.3 5.2 34 33-66 29-62 (356)
387 2ew2_A 2-dehydropantoate 2-red 93.1 0.07 2.4E-06 48.8 4.2 34 33-66 3-36 (316)
388 3oz2_A Digeranylgeranylglycero 93.0 0.048 1.6E-06 51.5 3.0 32 206-237 6-37 (397)
389 3doj_A AT3G25530, dehydrogenas 93.0 0.079 2.7E-06 48.6 4.4 36 31-66 19-54 (310)
390 3i83_A 2-dehydropantoate 2-red 93.0 0.12 4.1E-06 47.6 5.7 33 205-237 3-35 (320)
391 2x5o_A UDP-N-acetylmuramoylala 92.8 0.09 3.1E-06 50.8 4.7 36 33-68 5-40 (439)
392 3hn2_A 2-dehydropantoate 2-red 92.7 0.14 4.7E-06 47.0 5.7 33 205-237 3-35 (312)
393 3l6d_A Putative oxidoreductase 92.7 0.16 5.5E-06 46.4 6.1 35 32-66 8-42 (306)
394 3pdu_A 3-hydroxyisobutyrate de 92.7 0.094 3.2E-06 47.4 4.5 34 33-66 1-34 (287)
395 3g5s_A Methylenetetrahydrofola 92.5 0.066 2.3E-06 50.5 3.2 33 205-237 2-34 (443)
396 3hn2_A 2-dehydropantoate 2-red 92.5 0.11 3.7E-06 47.7 4.7 33 34-66 3-35 (312)
397 3ghy_A Ketopantoate reductase 92.4 0.14 4.9E-06 47.4 5.3 33 33-65 3-35 (335)
398 3k7m_X 6-hydroxy-L-nicotine ox 92.4 0.044 1.5E-06 52.7 1.9 73 320-394 219-306 (431)
399 1kyq_A Met8P, siroheme biosynt 92.3 0.06 2E-06 48.2 2.4 33 34-66 14-46 (274)
400 2raf_A Putative dinucleotide-b 92.2 0.12 4.2E-06 44.3 4.3 35 33-67 19-53 (209)
401 1zcj_A Peroxisomal bifunctiona 92.2 0.12 3.9E-06 50.4 4.6 36 31-66 35-70 (463)
402 3i83_A 2-dehydropantoate 2-red 92.2 0.11 3.8E-06 47.8 4.3 33 34-66 3-35 (320)
403 2vns_A Metalloreductase steap3 92.1 0.18 6.2E-06 43.4 5.4 35 32-66 27-61 (215)
404 4huj_A Uncharacterized protein 92.1 0.09 3.1E-06 45.5 3.4 35 32-66 22-57 (220)
405 3lk7_A UDP-N-acetylmuramoylala 92.1 0.11 3.6E-06 50.5 4.2 34 33-66 9-42 (451)
406 3ego_A Probable 2-dehydropanto 92.1 0.099 3.4E-06 47.9 3.8 72 206-350 4-75 (307)
407 3g17_A Similar to 2-dehydropan 92.0 0.15 5.1E-06 46.3 4.9 33 34-66 3-35 (294)
408 1id1_A Putative potassium chan 91.9 0.13 4.3E-06 41.6 3.8 34 204-237 3-36 (153)
409 4dio_A NAD(P) transhydrogenase 91.9 0.12 4.2E-06 48.9 4.2 34 33-66 190-223 (405)
410 1pzg_A LDH, lactate dehydrogen 91.9 0.15 5.3E-06 47.1 4.8 33 34-66 10-43 (331)
411 2oln_A NIKD protein; flavoprot 91.8 0.1 3.5E-06 49.5 3.6 32 206-237 6-37 (397)
412 1evy_A Glycerol-3-phosphate de 91.7 0.065 2.2E-06 50.4 2.2 34 33-66 15-48 (366)
413 2h78_A Hibadh, 3-hydroxyisobut 91.6 0.12 4.2E-06 47.0 3.9 34 33-66 3-36 (302)
414 3qha_A Putative oxidoreductase 91.6 0.14 4.8E-06 46.6 4.2 35 33-67 15-49 (296)
415 1bg6_A N-(1-D-carboxylethyl)-L 91.5 0.14 4.9E-06 47.8 4.3 33 34-66 5-37 (359)
416 3dme_A Conserved exported prot 91.5 0.1 3.5E-06 48.7 3.2 33 205-237 5-37 (369)
417 2wtb_A MFP2, fatty acid multif 91.5 0.2 6.7E-06 51.7 5.6 37 30-66 309-345 (725)
418 2uyy_A N-PAC protein; long-cha 91.5 0.24 8.1E-06 45.4 5.7 34 33-66 30-63 (316)
419 3ius_A Uncharacterized conserv 91.4 0.22 7.5E-06 44.7 5.3 33 205-237 6-38 (286)
420 1ks9_A KPA reductase;, 2-dehyd 91.4 0.15 5.2E-06 45.9 4.2 33 35-67 2-34 (291)
421 4e21_A 6-phosphogluconate dehy 91.4 0.16 5.3E-06 47.6 4.3 35 32-66 21-55 (358)
422 3g79_A NDP-N-acetyl-D-galactos 91.4 0.15 5E-06 49.7 4.2 36 32-67 17-54 (478)
423 3eag_A UDP-N-acetylmuramate:L- 91.3 0.17 5.7E-06 46.8 4.4 35 32-66 3-38 (326)
424 3ka7_A Oxidoreductase; structu 91.3 0.097 3.3E-06 50.1 2.9 33 205-237 1-33 (425)
425 3c96_A Flavin-containing monoo 91.3 0.13 4.3E-06 49.2 3.7 33 205-237 5-38 (410)
426 3c4a_A Probable tryptophan hyd 91.2 0.091 3.1E-06 49.6 2.7 33 205-237 1-35 (381)
427 3gpi_A NAD-dependent epimerase 91.2 0.27 9.2E-06 44.1 5.7 34 33-66 3-36 (286)
428 2ewd_A Lactate dehydrogenase,; 91.2 0.18 6.1E-06 46.4 4.5 34 33-66 4-38 (317)
429 2uzz_A N-methyl-L-tryptophan o 91.2 0.086 2.9E-06 49.4 2.4 32 206-237 4-35 (372)
430 2a9f_A Putative malic enzyme ( 91.1 0.15 5.2E-06 47.7 3.9 35 32-66 187-222 (398)
431 2gf3_A MSOX, monomeric sarcosi 91.1 0.11 3.9E-06 48.9 3.2 33 205-237 4-36 (389)
432 3zwc_A Peroxisomal bifunctiona 91.1 0.18 6.1E-06 51.9 4.8 38 29-66 312-349 (742)
433 1lld_A L-lactate dehydrogenase 91.0 0.18 6.1E-06 46.3 4.3 34 33-66 7-42 (319)
434 3p2y_A Alanine dehydrogenase/p 91.0 0.14 4.9E-06 47.9 3.7 34 33-66 184-217 (381)
435 3mog_A Probable 3-hydroxybutyr 91.0 0.25 8.5E-06 48.3 5.5 35 32-66 4-38 (483)
436 3gvi_A Malate dehydrogenase; N 90.9 0.2 7E-06 46.0 4.6 35 32-66 6-41 (324)
437 4a7p_A UDP-glucose dehydrogena 90.9 0.17 5.8E-06 48.8 4.1 34 34-67 9-42 (446)
438 2o3j_A UDP-glucose 6-dehydroge 90.9 0.18 6E-06 49.4 4.3 35 32-66 8-44 (481)
439 3dtt_A NADP oxidoreductase; st 90.8 0.21 7.3E-06 43.9 4.5 35 32-66 18-52 (245)
440 3l9w_A Glutathione-regulated p 90.8 0.27 9.1E-06 47.0 5.4 33 34-66 5-37 (413)
441 3eag_A UDP-N-acetylmuramate:L- 90.8 0.36 1.2E-05 44.5 6.2 34 204-237 4-38 (326)
442 2iid_A L-amino-acid oxidase; f 90.8 0.11 3.7E-06 51.1 2.8 35 203-237 32-66 (498)
443 3fwz_A Inner membrane protein 90.7 0.2 7E-06 39.7 3.9 34 204-237 7-40 (140)
444 1t2d_A LDH-P, L-lactate dehydr 90.6 0.23 7.9E-06 45.7 4.7 34 33-66 4-38 (322)
445 2vvm_A Monoamine oxidase N; FA 90.6 0.31 1.1E-05 47.7 5.9 57 106-172 254-311 (495)
446 3oj0_A Glutr, glutamyl-tRNA re 90.6 0.076 2.6E-06 42.5 1.2 34 33-66 21-54 (144)
447 4dll_A 2-hydroxy-3-oxopropiona 90.6 0.18 6.3E-06 46.3 4.0 35 32-66 30-64 (320)
448 3gg2_A Sugar dehydrogenase, UD 90.6 0.2 6.7E-06 48.5 4.3 32 35-66 4-35 (450)
449 2pv7_A T-protein [includes: ch 90.5 0.3 1E-05 44.4 5.3 34 33-66 21-55 (298)
450 1c0p_A D-amino acid oxidase; a 90.5 0.15 5.2E-06 47.6 3.4 33 205-237 7-39 (363)
451 2y0c_A BCEC, UDP-glucose dehyd 90.5 0.18 6.3E-06 49.2 4.0 33 34-66 9-41 (478)
452 3g0o_A 3-hydroxyisobutyrate de 90.4 0.22 7.5E-06 45.4 4.3 34 33-66 7-40 (303)
453 2hmt_A YUAA protein; RCK, KTN, 90.3 0.18 6.1E-06 39.8 3.3 35 203-237 5-39 (144)
454 1lss_A TRK system potassium up 90.3 0.16 5.4E-06 40.0 2.9 34 204-237 4-37 (140)
455 3ic5_A Putative saccharopine d 90.3 0.14 4.6E-06 39.0 2.4 34 204-237 5-39 (118)
456 2q3e_A UDP-glucose 6-dehydroge 90.3 0.18 6.2E-06 49.1 3.9 35 32-66 4-40 (467)
457 3llv_A Exopolyphosphatase-rela 90.2 0.16 5.5E-06 40.2 2.9 34 204-237 6-39 (141)
458 1zej_A HBD-9, 3-hydroxyacyl-CO 90.2 0.23 7.7E-06 45.0 4.1 33 33-66 12-44 (293)
459 2b9w_A Putative aminooxidase; 90.2 0.16 5.6E-06 48.6 3.4 34 204-237 6-40 (424)
460 3pid_A UDP-glucose 6-dehydroge 90.2 0.21 7.1E-06 47.9 4.0 34 32-66 35-68 (432)
461 2cvz_A Dehydrogenase, 3-hydrox 90.1 0.25 8.6E-06 44.5 4.4 32 34-66 2-33 (289)
462 4gwg_A 6-phosphogluconate dehy 90.1 0.31 1.1E-05 47.4 5.3 34 33-66 4-37 (484)
463 2g5c_A Prephenate dehydrogenas 90.0 0.25 8.6E-06 44.3 4.3 34 33-66 1-36 (281)
464 3pef_A 6-phosphogluconate dehy 90.0 0.23 7.7E-06 44.9 4.0 32 35-66 3-34 (287)
465 2ivd_A PPO, PPOX, protoporphyr 90.0 0.15 5.3E-06 49.6 3.1 35 203-237 15-49 (478)
466 1vl6_A Malate oxidoreductase; 89.9 0.22 7.7E-06 46.5 3.9 34 32-65 191-225 (388)
467 3nyc_A D-arginine dehydrogenas 89.9 0.16 5.5E-06 47.6 3.0 33 204-237 9-41 (381)
468 3nks_A Protoporphyrinogen oxid 89.9 0.15 5.2E-06 49.6 3.0 33 205-237 3-37 (477)
469 3ghy_A Ketopantoate reductase 89.9 0.24 8.4E-06 45.8 4.2 32 205-236 4-35 (335)
470 1jw9_B Molybdopterin biosynthe 89.9 0.24 8.2E-06 43.7 3.9 33 34-66 32-65 (249)
471 4e4t_A Phosphoribosylaminoimid 89.8 0.32 1.1E-05 46.5 5.1 35 32-66 34-68 (419)
472 3dje_A Fructosyl amine: oxygen 89.8 0.18 6.2E-06 48.5 3.4 33 205-237 7-40 (438)
473 1yj8_A Glycerol-3-phosphate de 89.8 0.26 9E-06 46.4 4.4 35 33-67 21-62 (375)
474 2e1m_A L-glutamate oxidase; L- 89.7 0.18 6.1E-06 47.5 3.1 34 203-236 43-76 (376)
475 3dhn_A NAD-dependent epimerase 89.7 0.21 7E-06 43.1 3.3 35 32-66 3-38 (227)
476 2hjr_A Malate dehydrogenase; m 89.7 0.3 1E-05 45.1 4.6 33 34-66 15-48 (328)
477 3tl2_A Malate dehydrogenase; c 89.6 0.29 1E-05 44.8 4.4 33 33-65 8-41 (315)
478 3ius_A Uncharacterized conserv 89.6 0.23 7.9E-06 44.5 3.7 34 33-66 5-38 (286)
479 3hwr_A 2-dehydropantoate 2-red 89.5 0.27 9.2E-06 45.2 4.2 33 33-66 19-51 (318)
480 3tri_A Pyrroline-5-carboxylate 89.5 0.4 1.4E-05 43.1 5.2 34 33-66 3-39 (280)
481 1x13_A NAD(P) transhydrogenase 89.5 0.25 8.4E-06 47.1 4.0 34 33-66 172-205 (401)
482 3p1w_A Rabgdi protein; GDI RAB 89.5 0.66 2.3E-05 45.1 7.1 58 107-172 256-313 (475)
483 4gde_A UDP-galactopyranose mut 89.5 0.19 6.5E-06 49.4 3.3 33 205-237 11-44 (513)
484 4g65_A TRK system potassium up 89.4 0.12 4E-06 50.3 1.7 32 35-66 5-36 (461)
485 3gt0_A Pyrroline-5-carboxylate 89.4 0.41 1.4E-05 42.1 5.1 33 34-66 3-39 (247)
486 3i6i_A Putative leucoanthocyan 89.4 0.42 1.4E-05 44.3 5.5 34 33-66 10-44 (346)
487 1hyh_A L-hicdh, L-2-hydroxyiso 89.3 0.28 9.4E-06 44.9 4.1 33 34-66 2-36 (309)
488 3obb_A Probable 3-hydroxyisobu 89.3 0.26 9E-06 44.8 3.9 35 32-66 2-36 (300)
489 3ktd_A Prephenate dehydrogenas 89.3 0.44 1.5E-05 44.2 5.4 34 33-66 8-41 (341)
490 3g3e_A D-amino-acid oxidase; F 89.2 0.16 5.5E-06 47.2 2.4 32 206-237 2-39 (351)
491 3qsg_A NAD-binding phosphogluc 89.2 0.27 9.3E-06 45.0 3.9 33 33-65 24-57 (312)
492 1l7d_A Nicotinamide nucleotide 89.2 0.29 1E-05 46.3 4.3 35 32-66 171-205 (384)
493 4ezb_A Uncharacterized conserv 89.2 0.26 9E-06 45.2 3.8 34 33-66 24-58 (317)
494 2i6t_A Ubiquitin-conjugating e 89.2 0.29 1E-05 44.5 4.1 35 32-66 13-49 (303)
495 2jae_A L-amino acid oxidase; o 89.1 0.21 7.3E-06 48.8 3.4 34 204-237 11-44 (489)
496 3ggo_A Prephenate dehydrogenas 89.1 0.37 1.3E-05 44.2 4.7 34 33-66 33-68 (314)
497 1z82_A Glycerol-3-phosphate de 89.1 0.32 1.1E-05 45.0 4.3 33 34-66 15-47 (335)
498 2bi7_A UDP-galactopyranose mut 89.1 0.24 8.1E-06 46.9 3.5 33 205-237 4-36 (384)
499 2bcg_G Secretory pathway GDP d 89.1 0.19 6.5E-06 48.7 2.9 33 205-237 12-44 (453)
500 2qyt_A 2-dehydropantoate 2-red 89.0 0.24 8.1E-06 45.3 3.4 30 35-64 10-45 (317)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.2e-41 Score=324.80 Aligned_cols=343 Identities=21% Similarity=0.334 Sum_probs=269.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.|.. .++.+.+..+.....++.++.+.....++.+.++.++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 589999999999999999999999999999999999999985 5777777777777777777776666677889999999
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEE-EEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWR-VKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~-v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
+.+++++.+++++++++|++++..+ +.|. |++.+ ..+.||+||+|||.++.|.+|.++|...+.+...
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~---------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~ 150 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDG---------RQWLARAVISATGTWGEAYTPEYQGLESFAGIQL 150 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTS---------CEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCC---------CEEEeCEEEECCCCCCCCCCCCCCCccccCCcEE
Confidence 9999999999999999999999877 5777 76654 3789999999999877888999999888888889
Q ss_pred eccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHH
Q 013943 192 HTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLL 271 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 271 (433)
|.+.+.+...+.+++++|||+|.+|+|+|..|++.+ +|+++.|++.+.+|....+ ..+..++...+....
T Consensus 151 ~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 220 (357)
T 4a9w_A 151 HSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDG-------RVLFERATERWKAQQ-- 220 (357)
T ss_dssp EGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCT-------HHHHTC-----------
T ss_pred EeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcC-------ccHHHHHHHHHhccc--
Confidence 998888877788999999999999999999999998 5999999865666654321 111111111111000
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecCceEEeCCeEEEcCCcEecccEEEEccC
Q 013943 272 VVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPGIKRLKRYAVEFVNGRCENFDAIILATG 351 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~~~~D~vi~atG 351 (433)
...+ ..........+.......+.+..+.+.....+.+++.+++.+.+|+++++|.||+|||
T Consensus 221 --~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G 282 (357)
T 4a9w_A 221 --EGRE----------------PDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTG 282 (357)
T ss_dssp -------------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCC
T ss_pred --cccC----------------CCcccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCC
Confidence 0000 0000001112344555566667777766666899999999999999999999999999
Q ss_pred CCCCCCCccccccccccCCCCcCCCCC-CCCCCCCceEEee--eccc----ccccchhhHHHHHHHHHhhhcc
Q 013943 352 YRSNVPSWLKESEMFSRKDGLPRRPFP-NGWKGESGLYSVG--FTKR----GLLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~~iya~G--d~~~----~~~~a~~~g~~~a~~i~~~l~~ 417 (433)
+.|+. .++++.++. +++|++.+|.. +++++.|+|||+| |++. .+..|..+|+.+|++|...|+.
T Consensus 283 ~~p~~-~~l~~~gl~-~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 283 FRPAL-SHLKGLDLV-TPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BCCCC-GGGTTTTCB-CTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCC-cccCccccc-CCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 99998 688888887 58899999943 3889999999999 5553 2557999999999999999986
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=5.6e-40 Score=325.37 Aligned_cols=308 Identities=22% Similarity=0.372 Sum_probs=246.6
Q ss_pred CCeEEECCChHHHHHHHHHHH---cCCC---EEEEecCCCCCCccccc---------------ccCceeeecCCceeecC
Q 013943 34 PGPVIVGAGPSGLATAACLKE---RGIP---SILLERSNCIASLWQLK---------------TYDRLRLHLPKQFCELP 92 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~---~g~~---v~iie~~~~~gg~w~~~---------------~~~~~~~~~~~~~~~~~ 92 (433)
+||+|||||++|+++|..|++ .|++ |+|||+.+.+||.|... .|..+..+.++..+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 99999999999999863 23344444555555555
Q ss_pred CCCCCCC----CCCCCCHHHHHHHHHHHHHHcCCc--ceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEE
Q 013943 93 LMGFPSE----FPTYPSKQQFVDYLEAYAKRFEIR--PRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLV 166 (433)
Q Consensus 93 ~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~l~--~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vi 166 (433)
.++++.. .+.++...++.+|+.++++++++. ++++++|+.++..++...|+|++.++ ..++..++.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~---~~g~~~~~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH---TTDTIYSEEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEET---TTTEEEEEEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc---CCCceEEEEcCEEE
Confidence 5544321 256678999999999999999998 88999999999887545898988752 02234678999999
Q ss_pred EccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceeccccc
Q 013943 167 VATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEML 246 (433)
Q Consensus 167 iAtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~ 246 (433)
+|||+++.|++|.+||.+.+.+..+|+..+.+...+.+++|+|||+|.+|+|+|..|++.|.+|+++.|++ .+++..
T Consensus 160 vAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~-~~~~~~-- 236 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT-APMGYK-- 236 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS-CCCCCC--
T ss_pred ECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC-CCCCCC--
Confidence 99999899999999999888888899988887777789999999999999999999999999999999887 222100
Q ss_pred CCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecCce
Q 013943 247 GKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPGIK 326 (433)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~ 326 (433)
+ ..+|++++.|.
T Consensus 237 -------------------------------------------------------------------~-~~~V~~~~~V~ 248 (464)
T 2xve_A 237 -------------------------------------------------------------------W-PENWDERPNLV 248 (464)
T ss_dssp -------------------------------------------------------------------C-CTTEEECSCEE
T ss_pred -------------------------------------------------------------------C-CCceEEcCCeE
Confidence 0 13677776788
Q ss_pred EEeCCeEEEcCCcEecccEEEEccCCCCCCCCcccc-ccccccCCCCcCCCC-CCCCCCCCceEEeeecccc--cccchh
Q 013943 327 RLKRYAVEFVNGRCENFDAIILATGYRSNVPSWLKE-SEMFSRKDGLPRRPF-PNGWKGESGLYSVGFTKRG--LLGVAM 402 (433)
Q Consensus 327 ~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~-~~l~~~~~g~~~~~~-~~~~~~~~~iya~Gd~~~~--~~~a~~ 402 (433)
++++++|.+.+|+++++|.||+|||+.|++ .++.+ .++..+++|.+...+ ..+.++.|+||++||++.. ...|..
T Consensus 249 ~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~-~~l~~~~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~ 327 (464)
T 2xve_A 249 RVDTENAYFADGSSEKVDAIILCTGYIHHF-PFLNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDA 327 (464)
T ss_dssp EECSSEEEETTSCEEECSEEEECCCBCCCC-TTBCTTTCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHH
T ss_pred EEeCCEEEECCCCEEeCCEEEECCCCCCCC-CCcCcccccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHH
Confidence 898889999999999999999999999998 46655 577654454552221 2346789999999998864 347889
Q ss_pred hHHHHHHHHHhhhc
Q 013943 403 DAKRIAQDIESCWK 416 (433)
Q Consensus 403 ~g~~~a~~i~~~l~ 416 (433)
||+++|.++.+++.
T Consensus 328 qa~~~a~~l~G~~~ 341 (464)
T 2xve_A 328 QAWYARDVIMGRLP 341 (464)
T ss_dssp HHHHHHHHHTTSSC
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999987654
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=3.5e-40 Score=331.56 Aligned_cols=367 Identities=19% Similarity=0.289 Sum_probs=274.3
Q ss_pred CCCCeEEECCChHHHHHHHHHH-HcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCC----CCCCCCCCCCH
Q 013943 32 CVPGPVIVGAGPSGLATAACLK-ERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMG----FPSEFPTYPSK 106 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~-~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 106 (433)
..+||+|||||++|+++|..|+ +.|++|+|+|+++.+||.|..+.|++..++.+...+.+...+ ...+...++..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3589999999999999999999 889999999999999999999999999988887766655321 11222345688
Q ss_pred HHHHHHHHHHHHHcCC--cceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCC
Q 013943 107 QQFVDYLEAYAKRFEI--RPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSD 184 (433)
Q Consensus 107 ~~~~~~l~~~~~~~~l--~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~ 184 (433)
.++.+|+.+.++++++ .++++++|++++.+++...|+|++.+| .++.||+||+|||.++.|..|++||.+
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--------EVYRAKYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--------CEEEEEEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--------CEEEeCEEEECCcccccCCCCCCCCcc
Confidence 9999999999999998 689999999999988667899999876 579999999999998899999999999
Q ss_pred CCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcc--
Q 013943 185 EFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLP-- 262 (433)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~-- 262 (433)
.+.+..+|++.+.+.....+|+|+|||+|.+|+|+|..|++.+.+||++.|++.+++|..+...+..... .+...+|
T Consensus 159 ~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~-~l~~~~~~~ 237 (540)
T 3gwf_A 159 TFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIA-EIKADYDRI 237 (540)
T ss_dssp GCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHH-HHHHTHHHH
T ss_pred ccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHH-HHHhccHHH
Confidence 8999999999998888889999999999999999999999999999999999988999876543321110 0100000
Q ss_pred -------------------------------------------------------hHHHHHHHHHHHHHhhccccccCCC
Q 013943 263 -------------------------------------------------------MRLVDKLLLVVSWLMLGDTARFGLD 287 (433)
Q Consensus 263 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (433)
..............+... +.
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~ 312 (540)
T 3gwf_A 238 WERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEI-----IE 312 (540)
T ss_dssp HHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHH-----CC
T ss_pred HHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHH-----cC
Confidence 000000000001100000 00
Q ss_pred CCCCC--cccccccCCCccccCchhhhhhhcCCeEEe---cC-ceEEeCCeEEEcCCcEecccEEEEccCCCCCCCCccc
Q 013943 288 RPLLG--PLQLKNLSGKTPVLDAGTLAKIKSGHIRVF---PG-IKRLKRYAVEFVNGRCENFDAIILATGYRSNVPSWLK 361 (433)
Q Consensus 288 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~ 361 (433)
.|... .... ....+++.++.++++.+++.+|+++ .. |+++++++|.+.||+++++|+||+||||.++. .++.
T Consensus 313 dp~~~~~l~P~-~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~-~~~~ 390 (540)
T 3gwf_A 313 DPETARKLMPK-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD-GNYR 390 (540)
T ss_dssp SHHHHHHHCCC-SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS-HHHH
T ss_pred CHHHHHhCCCC-CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc-cCcC
Confidence 11100 0011 4567788999999999999999999 44 99999999999999999999999999999986 3554
Q ss_pred cccccccCCCCcCC---------CCCCCCCCCCceEEe-eecccc---cccchhhHHHHHHHHHhhh
Q 013943 362 ESEMFSRKDGLPRR---------PFPNGWKGESGLYSV-GFTKRG---LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 362 ~~~l~~~~~g~~~~---------~~~~~~~~~~~iya~-Gd~~~~---~~~a~~~g~~~a~~i~~~l 415 (433)
..++.. .+|..+. -......+.||+|++ |+.+.. +..+..++..+++.|..-.
T Consensus 391 ~~~i~g-~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~~~ 456 (540)
T 3gwf_A 391 RIEIRG-RDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGYAE 456 (540)
T ss_dssp TSEEEC-GGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEC-CCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 444322 2332221 112334577999998 876542 3366778888887775433
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=9.8e-39 Score=321.33 Aligned_cols=366 Identities=19% Similarity=0.277 Sum_probs=266.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCC----CCCCCCCCCHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGF----PSEFPTYPSKQ 107 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 107 (433)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|..+.|++..++.+...+.+...+. ..+...++...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 45899999999999999999999999999999999999999999999999988877666543221 12334567899
Q ss_pred HHHHHHHHHHHHcCC--cceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCC
Q 013943 108 QFVDYLEAYAKRFEI--RPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDE 185 (433)
Q Consensus 108 ~~~~~l~~~~~~~~l--~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~ 185 (433)
++..|+.+.++++++ .++++++|++++.+++...|+|++.+| .+++||+||+|||..+.|..|++||.+.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--------EVVTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--------EEEEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCcCCCCCCccc
Confidence 999999999999998 679999999999987667899999876 7899999999999888999999999998
Q ss_pred CCCceeeccCCCCC-------CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHH
Q 013943 186 FGGDIRHTSLYKSG-------EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLL 258 (433)
Q Consensus 186 ~~~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~ 258 (433)
|.+..+|+..+... ....+|+|+|||+|.+|+|+|..|++.+.+||++.|++.+++|..+...+..... .+.
T Consensus 160 f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~-~l~ 238 (545)
T 3uox_A 160 FKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMD-SLR 238 (545)
T ss_dssp CCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHH-HHH
T ss_pred cCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHH-HHH
Confidence 99999999988776 6778999999999999999999999999999999999988888766533221110 000
Q ss_pred hhcc--------------------------------------------------------hHHHHHHHHHHHHHhhcccc
Q 013943 259 KWLP--------------------------------------------------------MRLVDKLLLVVSWLMLGDTA 282 (433)
Q Consensus 259 ~~l~--------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 282 (433)
..+| ....+.........+...
T Consensus 239 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 316 (545)
T 3uox_A 239 NRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQR-- 316 (545)
T ss_dssp HTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHH--
T ss_pred hhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHH--
Confidence 0000 000000000011100000
Q ss_pred ccCCCCCCCCccc---ccccCCCccccCchhhhhhhcCCeEEe---cC-ceEEeCCeEEEcCCcEecccEEEEccCCCCC
Q 013943 283 RFGLDRPLLGPLQ---LKNLSGKTPVLDAGTLAKIKSGHIRVF---PG-IKRLKRYAVEFVNGRCENFDAIILATGYRSN 355 (433)
Q Consensus 283 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~ 355 (433)
+..|...... .-....+++.++.++++.+++.+|+++ .. |+++++++|.+.+| ++++|+||+||||.++
T Consensus 317 ---v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 317 ---VKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp ---CSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSS
T ss_pred ---cCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCccccc
Confidence 0001100000 012346678889999999999999998 34 99999999999999 9999999999999987
Q ss_pred CCCccccccccccCCCCcCCCC---------CCCCCCCCceEEe-eecccc-----cccchhhHHHHHHHHHhh
Q 013943 356 VPSWLKESEMFSRKDGLPRRPF---------PNGWKGESGLYSV-GFTKRG-----LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 356 ~~~~~~~~~l~~~~~g~~~~~~---------~~~~~~~~~iya~-Gd~~~~-----~~~a~~~g~~~a~~i~~~ 414 (433)
+ .++....+.. .+|..+.+. .....+.||+|++ |..++. +..+..++..+++.|..-
T Consensus 393 ~-~~~~~~~i~g-~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~ 464 (545)
T 3uox_A 393 T-GSLDRIDIRG-KDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYM 464 (545)
T ss_dssp S-CSCTTSEEEC-GGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred c-ccCCCceEEC-CCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHH
Confidence 5 4454444322 334333210 1233467999986 444331 335677888888777543
No 5
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=2.1e-38 Score=319.22 Aligned_cols=365 Identities=23% Similarity=0.335 Sum_probs=268.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCC----CCCCCCCCCCHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMG----FPSEFPTYPSKQ 107 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 107 (433)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|..+.|++..++.+...+.+...+ ...+...++...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 4589999999999999999999999999999999999999999999999999888777665331 112334567899
Q ss_pred HHHHHHHHHHHHcCC--cceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCC
Q 013943 108 QFVDYLEAYAKRFEI--RPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDE 185 (433)
Q Consensus 108 ~~~~~l~~~~~~~~l--~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~ 185 (433)
++.+|+.+.++++++ .++++++|++++.+++...|+|++.+| .++.||+||+|||..+.|..|++||.+.
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~ 171 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--------DEVSARFLVVAAGPLSNANTPAFDGLDR 171 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSEEECCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 999999999999998 689999999999988767899999876 6799999999999888999999999998
Q ss_pred CCCceeeccCCC-CCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchH
Q 013943 186 FGGDIRHTSLYK-SGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMR 264 (433)
Q Consensus 186 ~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~ 264 (433)
+.+..+|+..+. +.....+|+|+|||+|.+|+|+|..|++.+.+||++.|++.+++|..+...+..... .+...+|..
T Consensus 172 f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~-~l~~~~~~~ 250 (549)
T 4ap3_A 172 FTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRA-EQKANYAER 250 (549)
T ss_dssp CCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHH-HHHHTHHHH
T ss_pred CCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHH-HHHhccHHH
Confidence 999999999888 577788999999999999999999999999999999999998998766543221110 000000000
Q ss_pred H-------------------------------------------------------HHHHHHHHHHHhhccccccCCCCC
Q 013943 265 L-------------------------------------------------------VDKLLLVVSWLMLGDTARFGLDRP 289 (433)
Q Consensus 265 ~-------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 289 (433)
. .......+...+... +..|
T Consensus 251 ~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~d~ 325 (549)
T 4ap3_A 251 RRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAV-----VDDP 325 (549)
T ss_dssp HHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHH-----CSCH
T ss_pred HHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHH-----cCCH
Confidence 0 000000000000000 0001
Q ss_pred CCCcccc---cccCCCccccCchhhhhhhcCCeEEe---cC-ceEEeCCeEEEcCCcEecccEEEEccCCCCCCCCcccc
Q 013943 290 LLGPLQL---KNLSGKTPVLDAGTLAKIKSGHIRVF---PG-IKRLKRYAVEFVNGRCENFDAIILATGYRSNVPSWLKE 362 (433)
Q Consensus 290 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~ 362 (433)
....... -....+++.++.++.+.+++.+|+++ .. |+++++++|.+.+| ++++|+||+||||.++. .++..
T Consensus 326 ~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~-~~~~~ 403 (549)
T 4ap3_A 326 AVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMT-GSLDK 403 (549)
T ss_dssp HHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESS-TTGGG
T ss_pred HHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccc-cccCc
Confidence 0000000 12356677889999999999999999 55 99999999999999 99999999999999986 35555
Q ss_pred ccccccCCCCcCCC---------CCCCCCCCCceEEe-eecccc-----cccchhhHHHHHHHHHh
Q 013943 363 SEMFSRKDGLPRRP---------FPNGWKGESGLYSV-GFTKRG-----LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 363 ~~l~~~~~g~~~~~---------~~~~~~~~~~iya~-Gd~~~~-----~~~a~~~g~~~a~~i~~ 413 (433)
..+.. .+|..+.+ ......+.||+|.+ |..++. +..+..++..+++.|..
T Consensus 404 ~~i~g-~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 404 LEIVG-RGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp SEEEC-GGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred eeEEC-CCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHH
Confidence 54432 33332221 01233467999997 655432 33567777777777654
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=1e-37 Score=315.16 Aligned_cols=369 Identities=20% Similarity=0.288 Sum_probs=269.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCC----CCCCCCCCCHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGF----PSEFPTYPSKQ 107 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 107 (433)
..+||+|||||++|+++|..|++.|++++|+|+++.+||.|..+.|++..++.+...+.+...+. ..+...++...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 45899999999999999999999999999999999999999999999988877665554432210 01223467889
Q ss_pred HHHHHHHHHHHHcCC--cceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCC
Q 013943 108 QFVDYLEAYAKRFEI--RPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDE 185 (433)
Q Consensus 108 ~~~~~l~~~~~~~~l--~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~ 185 (433)
++.+|+.++++++++ .++++++|++++.+++...|+|++.+| .+++||+||+|||.++.|.+|++||.+.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--------DRIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 999999999999874 478999999999987656899998775 5799999999999988999999999988
Q ss_pred CCCceeeccCCC-CCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch-
Q 013943 186 FGGDIRHTSLYK-SGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM- 263 (433)
Q Consensus 186 ~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~- 263 (433)
+.|..+|+..+. +...+.+|+|+|||+|.+|+|++..|++.+.+|+++.|.+.+++|..+...... ....+...+|.
T Consensus 167 f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~-~~~~~~~~~p~l 245 (542)
T 1w4x_A 167 FAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPE-FLADLKKRYAEF 245 (542)
T ss_dssp CCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHH-HHHHHHTTHHHH
T ss_pred CCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHH-HHHHHHhhCHHH
Confidence 889999998887 446678999999999999999999999999999999999988777654322110 00000000000
Q ss_pred -------------------------HHHHHH-----------------------------HHHHHHHh---hccccccCC
Q 013943 264 -------------------------RLVDKL-----------------------------LLVVSWLM---LGDTARFGL 286 (433)
Q Consensus 264 -------------------------~~~~~~-----------------------------~~~~~~~~---~~~~~~~~~ 286 (433)
..+..+ .......+ ..+......
T Consensus 246 ~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (542)
T 1w4x_A 246 REESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAER 325 (542)
T ss_dssp HHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHH
T ss_pred HHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHh
Confidence 000000 00000000 001000000
Q ss_pred CCCCCCcccccccCCCccccCchhhhhhhcCCeEEe---cC-ceEEeCCeEEEcCCcEecccEEEEccCCCCCCCCcccc
Q 013943 287 DRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVF---PG-IKRLKRYAVEFVNGRCENFDAIILATGYRSNVPSWLKE 362 (433)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~ 362 (433)
..|. ......+++.++.++++.+++++|+++ .. |+++++++|.+.| +++++|+||+|||+.++. .++..
T Consensus 326 l~P~-----~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~-~~~~~ 398 (542)
T 1w4x_A 326 LVPK-----GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALT-GALFK 398 (542)
T ss_dssp HSCC-----SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTT-HHHHT
T ss_pred cCCC-----CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccc-cCcCc
Confidence 0110 123456788999999999999999997 33 9999999999999 899999999999999986 45555
Q ss_pred ccccccCCCCcCCC------CC---CCCCCCCceEEe-eecccc-----cccchhhHHHHHHHHHhhhcc
Q 013943 363 SEMFSRKDGLPRRP------FP---NGWKGESGLYSV-GFTKRG-----LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 363 ~~l~~~~~g~~~~~------~~---~~~~~~~~iya~-Gd~~~~-----~~~a~~~g~~~a~~i~~~l~~ 417 (433)
.++.. .+|..+.+ .. ....+.||+|++ |+.+.. +..+..+++.+|+.|....++
T Consensus 399 ~~i~g-~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~ 467 (542)
T 1w4x_A 399 IDIRG-VGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKN 467 (542)
T ss_dssp SEEEC-GGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeEC-CCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 44432 34544432 01 223467999998 998632 346888999999999876554
No 7
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=1.1e-37 Score=308.32 Aligned_cols=302 Identities=22% Similarity=0.317 Sum_probs=234.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCcccccccCc------------------------------
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI--PSILLERSNCIASLWQLKTYDR------------------------------ 79 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~~~gg~w~~~~~~~------------------------------ 79 (433)
..+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.......
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 46899999999999999999999999 9999999999999998743211
Q ss_pred ---eeeecCCceeecCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCce
Q 013943 80 ---LRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVE 156 (433)
Q Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~ 156 (433)
+..+.+...+.+..++++...+.++...++.+|+.+++++++..++++++|++++..+ +.|+|++.+.. .++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~V~~~~~~---~G~ 159 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWVVTYKGTK---AGS 159 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEEEEEEESS---TTC
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEEEEEeecC---CCC
Confidence 1112222333445555555556778899999999999988887889999999998876 67888887510 112
Q ss_pred -eEEEEeCEEEEccCCCCCCccCCccCCCCC----CCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCC-c
Q 013943 157 -EMEYRCRWLVVATGENAEAVVPEIEGSDEF----GGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAM-P 230 (433)
Q Consensus 157 -~~~~~~d~viiAtG~~~~p~~p~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~-V 230 (433)
..++.||+||+|||+++.|++|.++|.+.+ .+.++|+..+.+...+.+++|+|||+|++|+|+|..|++.+.+ |
T Consensus 160 ~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V 239 (447)
T 2gv8_A 160 PISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPI 239 (447)
T ss_dssp CEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSE
T ss_pred eeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcE
Confidence 247999999999998889999999987643 4568888888877777899999999999999999999999998 9
Q ss_pred EEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchh
Q 013943 231 SLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGT 310 (433)
Q Consensus 231 tl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (433)
+++.|++..
T Consensus 240 ~l~~r~~~~----------------------------------------------------------------------- 248 (447)
T 2gv8_A 240 YQSLLGGGD----------------------------------------------------------------------- 248 (447)
T ss_dssp EEECTTCCS-----------------------------------------------------------------------
T ss_pred EEEeCCCCc-----------------------------------------------------------------------
Confidence 999887621
Q ss_pred hhhhhcCCeEEecCceEEe--CCeEEEcCCcE-ecccEEEEccCCCCCCCCc-----cccc--cccccCCCCcCCCCCCC
Q 013943 311 LAKIKSGHIRVFPGIKRLK--RYAVEFVNGRC-ENFDAIILATGYRSNVPSW-----LKES--EMFSRKDGLPRRPFPNG 380 (433)
Q Consensus 311 ~~~~~~~~v~~~~~v~~~~--~~~v~~~~g~~-~~~D~vi~atG~~~~~~~~-----~~~~--~l~~~~~g~~~~~~~~~ 380 (433)
+...+|.+...|.++. +.+|.+.||++ +++|.||+|||+.|++ .| +.+. ++.. ++..+++ .+.
T Consensus 249 ---l~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~-~~l~~~~l~~~~~~i~~--~~~~~~~-~~~ 321 (447)
T 2gv8_A 249 ---IQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSV-PFPSLAKLKSPETKLID--DGSHVHN-VYQ 321 (447)
T ss_dssp ---CBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCC-CCHHHHSCCSTTTCCCS--SSSSCCS-EET
T ss_pred ---CCCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCC-CCCcccccccccCceec--CCCcccc-ccc
Confidence 1224666666688884 45799999987 7999999999999998 56 6654 3433 4555554 122
Q ss_pred ---CCCCCceEEeeecccc--cccchhhHHHHHHHHHhhhc
Q 013943 381 ---WKGESGLYSVGFTKRG--LLGVAMDAKRIAQDIESCWK 416 (433)
Q Consensus 381 ---~~~~~~iya~Gd~~~~--~~~a~~~g~~~a~~i~~~l~ 416 (433)
.++.|+||++||+... ...|..||+++|.+|.++++
T Consensus 322 ~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~~ 362 (447)
T 2gv8_A 322 HIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLK 362 (447)
T ss_dssp TTEETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSC
T ss_pred ccccCCCCcEEEEeccccccCchHHHHHHHHHHHHHcCCCC
Confidence 2688999999999864 34688999999999987654
No 8
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.2e-36 Score=286.72 Aligned_cols=291 Identities=20% Similarity=0.262 Sum_probs=222.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
.++||+|||||++|+++|..|++.|++|+++|+. .+||.|..... +..++. ++......++.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~ 69 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPG------FPEPIAGMELAQ 69 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTT------CSSCBCHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCC------CCCCCCHHHHHH
Confidence 4689999999999999999999999999999999 68887754210 001111 111246788999
Q ss_pred HHHHHHHHcCCcceecceEEEEEEe--CCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCc
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYD--ATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGD 189 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~--~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~ 189 (433)
++.+.+++.+++++. ++|++++.. ++ ..|++.+.++ ..+.||+||+||| ++|..|+++|...+.+.
T Consensus 70 ~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~i~g~~~~~~~ 137 (325)
T 2q7v_A 70 RMHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPFTVRGYN--------GEYRAKAVILATG--ADPRKLGIPGEDNFWGK 137 (325)
T ss_dssp HHHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCEEEEESS--------CEEEEEEEEECCC--EEECCCCCTTTTTTBTT
T ss_pred HHHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhccCc
Confidence 999999999999877 589999886 42 2377777665 6899999999999 67888888888766555
Q ss_pred eeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHH
Q 013943 190 IRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKL 269 (433)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~ 269 (433)
..+.+.+.+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~-------------------------- 190 (325)
T 2q7v_A 138 GVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT-LRAN-------------------------- 190 (325)
T ss_dssp TEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS-CCSC--------------------------
T ss_pred eEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc-CCcc--------------------------
Confidence 5565544334445679999999999999999999999999999998872 2110
Q ss_pred HHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhh-hcCCeEEecC--ceEEeCC----eEEEc---CCc
Q 013943 270 LLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKI-KSGHIRVFPG--IKRLKRY----AVEFV---NGR 339 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~----~v~~~---~g~ 339 (433)
..+.+.+ +..+|+++.+ +.++..+ ++.+. +|+
T Consensus 191 --------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~ 232 (325)
T 2q7v_A 191 --------------------------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGE 232 (325)
T ss_dssp --------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCC
T ss_pred --------------------------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCc
Confidence 0001112 3358888876 6777654 46665 565
Q ss_pred --EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHh
Q 013943 340 --CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 340 --~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~ 413 (433)
++++|.||+|+|+.|+. .++.+. +..+++|++.+| +.++++.|+||++|||+.. +..|..+|+.+|.+|.+
T Consensus 233 ~~~i~~D~vi~a~G~~p~~-~~l~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 233 VSELATDGVFIFIGHVPNT-AFVKDT-VSLRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp EEEEECSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCEEEEccCCCCCh-HHHhhh-cccCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998 577766 555678999999 5678899999999999864 44789999999999999
Q ss_pred hhccCC
Q 013943 414 CWKAKA 419 (433)
Q Consensus 414 ~l~~~~ 419 (433)
.+...+
T Consensus 310 ~l~~~~ 315 (325)
T 2q7v_A 310 QLAALE 315 (325)
T ss_dssp HHHHC-
T ss_pred HHHHhh
Confidence 887644
No 9
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1e-36 Score=288.29 Aligned_cols=287 Identities=15% Similarity=0.186 Sum_probs=227.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
++||+|||||++|+++|..|++.|++|+|+|++ +||.|.... ....++.+ ......++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGL-------IEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTS-------TTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCC-------CCCCHHHHHHH
Confidence 589999999999999999999999999999998 888876521 00011111 11357889999
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCceee
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIRH 192 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~~ 192 (433)
+.+.+.+.++++++ ++|++++.++ +.|.+.+.++ ..+.||+||+||| +.|..|+++|...+.+..++
T Consensus 76 ~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~~~~~~~ 142 (323)
T 3f8d_A 76 FNKHIEKYEVPVLL-DIVEKIENRG--DEFVVKTKRK--------GEFKADSVILGIG--VKRRKLGVPGEQEFAGRGIS 142 (323)
T ss_dssp HHHHHHTTTCCEEE-SCEEEEEEC----CEEEEESSS--------CEEEEEEEEECCC--CEECCCCCTTTTTTBTTTEE
T ss_pred HHHHHHHcCCEEEE-EEEEEEEecC--CEEEEEECCC--------CEEEcCEEEECcC--CCCccCCCCchhhhcCCceE
Confidence 99999999999888 8999999876 5688888775 6899999999999 66888889998776666666
Q ss_pred ccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHH
Q 013943 193 TSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLV 272 (433)
Q Consensus 193 ~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 272 (433)
.+...+.....+++++|||+|.+|+|+|..|.+.+.+|+++.+.+ .+++..
T Consensus 143 ~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~~---------------------------- 193 (323)
T 3f8d_A 143 YCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKAQP---------------------------- 193 (323)
T ss_dssp SCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCSCH----------------------------
T ss_pred EeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCcCH----------------------------
Confidence 655555555678999999999999999999999999999999887 332210
Q ss_pred HHHHhhccccccCCCCCCCCcccccccCCCccccCchhh-hhhhcCCeEEecC--ceEEeCC----eEEEcC---Cc--E
Q 013943 273 VSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTL-AKIKSGHIRVFPG--IKRLKRY----AVEFVN---GR--C 340 (433)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~----~v~~~~---g~--~ 340 (433)
.+. +..++.+|+++.+ +.++..+ ++.+.+ |+ +
T Consensus 194 ------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~ 237 (323)
T 3f8d_A 194 ------------------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKE 237 (323)
T ss_dssp ------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE
T ss_pred ------------------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEE
Confidence 011 2233458898887 7777655 377765 76 6
Q ss_pred ecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc------cccchhhHHHHHHHHHhh
Q 013943 341 ENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG------LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 341 ~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~------~~~a~~~g~~~a~~i~~~ 414 (433)
+++|.||+|+|+.|+. .+++..++..+++|++.+| +.++++.|+||++|||+.. +..|..+|..+|.+|.+.
T Consensus 238 ~~~D~vv~a~G~~p~~-~~~~~~g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 315 (323)
T 3f8d_A 238 LNVNGVFIEIGFDPPT-DFAKSNGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRY 315 (323)
T ss_dssp EECSEEEECCCEECCH-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEEECCCCCh-hHHhhcCeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHH
Confidence 9999999999999997 5788878877788999999 6788999999999999873 347899999999999998
Q ss_pred hccC
Q 013943 415 WKAK 418 (433)
Q Consensus 415 l~~~ 418 (433)
+.+.
T Consensus 316 l~~~ 319 (323)
T 3f8d_A 316 VTEK 319 (323)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8754
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=9.6e-37 Score=289.71 Aligned_cols=294 Identities=16% Similarity=0.209 Sum_probs=232.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.|.. .++..... .++.++ .....++..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~~------~~~~~~-------~~~~~~~~~ 71 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYIY------DVAGFP-------KIRAQELIN 71 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEEC------CSTTCS-------SEEHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceEe------ccCCCC-------CCCHHHHHH
Confidence 4689999999999999999999999999999999999999843 22222211 111111 125789999
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC-CCccCCccCCCCCCCce
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA-EAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~-~p~~p~~~g~~~~~~~~ 190 (433)
++.+.+.+++++++++++|++++...+ ..|.+.+.++ .+.||+||+|||..+ .|..|+++|...+.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g---------~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~ 141 (332)
T 3lzw_A 72 NLKEQMAKFDQTICLEQAVESVEKQAD-GVFKLVTNEE---------THYSKTVIITAGNGAFKPRKLELENAEQYEGKN 141 (332)
T ss_dssp HHHHHHTTSCCEEECSCCEEEEEECTT-SCEEEEESSE---------EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTT
T ss_pred HHHHHHHHhCCcEEccCEEEEEEECCC-CcEEEEECCC---------EEEeCEEEECCCCCcCCCCCCCCCChhhccCce
Confidence 999999999999999999999998764 4788888764 499999999999432 88888899887766666
Q ss_pred eeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHH
Q 013943 191 RHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLL 270 (433)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 270 (433)
++. .+.+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|.+. +.+..
T Consensus 142 ~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~-~~~~~-------------------------- 193 (332)
T 3lzw_A 142 LHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK-FRAHE-------------------------- 193 (332)
T ss_dssp EES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS-CSSCH--------------------------
T ss_pred EEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc-CCccH--------------------------
Confidence 666 55555566789999999999999999999999999999998872 21110
Q ss_pred HHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe----EEEcC-----Cc
Q 013943 271 LVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA----VEFVN-----GR 339 (433)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~~~~-----g~ 339 (433)
...+.+++.+|+++.+ +.++..++ +.+.+ ++
T Consensus 194 --------------------------------------~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 235 (332)
T 3lzw_A 194 --------------------------------------HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKE 235 (332)
T ss_dssp --------------------------------------HHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEE
T ss_pred --------------------------------------HHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceE
Confidence 0012345578888876 77777653 77765 45
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc---c---cccchhhHHHHHHHHHh
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR---G---LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~---~---~~~a~~~g~~~a~~i~~ 413 (433)
++++|.||+|+|+.|+. .++...++.. ++|++.+| +.++++.|+|||+|||+. . +..|..+|..+|.+|..
T Consensus 236 ~~~~D~vv~a~G~~p~~-~~~~~~~~~~-~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 236 ILEIDDLIVNYGFVSSL-GPIKNWGLDI-EKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp EEECSEEEECCCEECCC-GGGGGSSCCE-ETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCEEEEeeccCCCc-hHHhhcCccc-cCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 69999999999999998 6788878776 78899998 578899999999999983 2 34789999999999999
Q ss_pred hhccC
Q 013943 414 CWKAK 418 (433)
Q Consensus 414 ~l~~~ 418 (433)
.+...
T Consensus 313 ~l~~~ 317 (332)
T 3lzw_A 313 YMDPK 317 (332)
T ss_dssp HHCTT
T ss_pred hhChh
Confidence 98764
No 11
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.2e-36 Score=289.61 Aligned_cols=306 Identities=21% Similarity=0.240 Sum_probs=225.3
Q ss_pred CCCCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCC
Q 013943 26 SSPRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPS 105 (433)
Q Consensus 26 ~~~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (433)
|.+.++..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... .+..+.++ ...
T Consensus 7 p~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~-------~~~ 72 (360)
T 3ab1_A 7 PATDHHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGFP-------EVP 72 (360)
T ss_dssp ------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTCS-------SEE
T ss_pred CccccCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCCC-------CCC
Confidence 33334456899999999999999999999999999999999999887532 21111 11111110 125
Q ss_pred HHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC-CCccCCccC-C
Q 013943 106 KQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA-EAVVPEIEG-S 183 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~-~p~~p~~~g-~ 183 (433)
..++.+++.+.+.+.+++++++++|+.++..++ ..|+|++.++ ..+.||+||+|||..+ .|..|+++| .
T Consensus 73 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g--------~~~~~~~li~AtG~~~~~~~~~~i~g~~ 143 (360)
T 3ab1_A 73 AIDLVESLWAQAERYNPDVVLNETVTKYTKLDD-GTFETRTNTG--------NVYRSRAVLIAAGLGAFEPRKLPQLGNI 143 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCEEEEETTS--------CEEEEEEEEECCTTCSCCBCCCGGGCCC
T ss_pred HHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceEEEEECCC--------cEEEeeEEEEccCCCcCCCCCCCCCCch
Confidence 678889999999888999999999999998753 3688888765 6899999999999543 677778888 6
Q ss_pred CCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 184 DEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
+.+.+..++.+ +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+++...
T Consensus 144 ~~~~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~~~------------------ 203 (360)
T 3ab1_A 144 DHLTGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQGHGK------------------ 203 (360)
T ss_dssp TTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSSCSH------------------
T ss_pred hhCcCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCCCHH------------------
Confidence 55554334332 233334568999999999999999999999999999999887 2222100
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-----eEEEc
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-----AVEFV 336 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~ 336 (433)
....+.+..++.+|+++.+ +.++..+ ++.+.
T Consensus 204 ------------------------------------------~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~ 241 (360)
T 3ab1_A 204 ------------------------------------------TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR 241 (360)
T ss_dssp ------------------------------------------HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE
T ss_pred ------------------------------------------HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE
Confidence 0011123345567888887 6677543 46664
Q ss_pred --CC--cEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc------cccchhhHHH
Q 013943 337 --NG--RCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG------LLGVAMDAKR 406 (433)
Q Consensus 337 --~g--~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~------~~~a~~~g~~ 406 (433)
+| +++++|.||+|+|+.|+. .+++..++..+ +|++.+| +.++++.|+|||+|||+.. +..|..+|..
T Consensus 242 ~~~g~~~~i~~D~vi~a~G~~p~~-~~l~~~~~~~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~ 318 (360)
T 3ab1_A 242 SSDGSKWTVEADRLLILIGFKSNL-GPLARWDLELY-ENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATM 318 (360)
T ss_dssp ETTCCEEEEECSEEEECCCBCCSC-GGGGGSSCCEE-TTEEECC-TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHH
T ss_pred ecCCCeEEEeCCEEEECCCCCCCH-HHHHhhccccc-cCeeeec-CCCcCCCCCEEEecCccCCCCccceeehhHHHHHH
Confidence 77 569999999999999998 57877777664 7888898 5778899999999999842 3468899999
Q ss_pred HHHHHHhhhccCC
Q 013943 407 IAQDIESCWKAKA 419 (433)
Q Consensus 407 ~a~~i~~~l~~~~ 419 (433)
+|++|.+.+....
T Consensus 319 aa~~i~~~l~~~~ 331 (360)
T 3ab1_A 319 AVRHSLSYIKPGE 331 (360)
T ss_dssp HHHHHHHHHSCC-
T ss_pred HHHHHHhhcCCcc
Confidence 9999999887543
No 12
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=8.6e-37 Score=290.79 Aligned_cols=295 Identities=17% Similarity=0.193 Sum_probs=223.7
Q ss_pred ccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecC----CCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCC
Q 013943 30 CICVPGPVIVGAGPSGLATAACLKERGIPSILLERS----NCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPS 105 (433)
Q Consensus 30 ~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~----~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (433)
...++||+|||||++|+++|..|++.|++|+|||+. ..+||.|.... ....++ .++.+..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~ 82 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGLT 82 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCEE
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccCC
Confidence 345699999999999999999999999999999994 47888876532 000111 1123356
Q ss_pred HHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCC
Q 013943 106 KQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDE 185 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~ 185 (433)
..++..++.+.+.+.++++++++ |++++... ..|++.+... .....+.||+||+||| .++..|.++|...
T Consensus 83 ~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~v~~~~~-----~~~~~~~~d~vvlAtG--~~~~~~~~~g~~~ 152 (338)
T 3itj_A 83 GSELMDRMREQSTKFGTEIITET-VSKVDLSS--KPFKLWTEFN-----EDAEPVTTDAIILATG--ASAKRMHLPGEET 152 (338)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEEEEETTC-----SSSCCEEEEEEEECCC--EEECCCCCTTHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEEEEEEec-----CCCcEEEeCEEEECcC--CCcCCCCCCCchh
Confidence 88999999999999999999887 99998766 6677776310 0026789999999999 6788888888665
Q ss_pred CCCceeeccCCCCCC--CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 186 FGGDIRHTSLYKSGE--DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 186 ~~~~~~~~~~~~~~~--~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
+.+..++.+...+.. .+.+++++|||+|.+|+|+|..|.+.+.+|+++.+.+. +++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~-~~~~-------------------- 211 (338)
T 3itj_A 153 YWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH-LRAS-------------------- 211 (338)
T ss_dssp HBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCSC--------------------
T ss_pred ccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc-cCCC--------------------
Confidence 444445554433333 45789999999999999999999999999999998872 2210
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhc-CCeEEecC--ceEEeCCe-----EEE
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKS-GHIRVFPG--IKRLKRYA-----VEF 335 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~~-----v~~ 335 (433)
..+.+.+.+ .+|+++.+ +.++..++ +.+
T Consensus 212 --------------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~ 247 (338)
T 3itj_A 212 --------------------------------------------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRI 247 (338)
T ss_dssp --------------------------------------------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEE
T ss_pred --------------------------------------------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEE
Confidence 011122333 48998877 77776543 777
Q ss_pred cC-----CcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHH
Q 013943 336 VN-----GRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKR 406 (433)
Q Consensus 336 ~~-----g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~ 406 (433)
.+ ++++++|.||+|+|+.|+. .++.. ++..+++|++.++++.++++.|+|||+|||+.. +..|..+|+.
T Consensus 248 ~~~~~g~~~~i~~D~vi~a~G~~p~~-~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~ 325 (338)
T 3itj_A 248 KNTKKNEETDLPVSGLFYAIGHTPAT-KIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCM 325 (338)
T ss_dssp EETTTTEEEEEECSEEEECSCEEECC-GGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHH
T ss_pred EECCCCceEEEEeCEEEEEeCCCCCh-hHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHH
Confidence 65 4579999999999999998 56665 777678999986547888999999999999953 4478999999
Q ss_pred HHHHHHhhhcc
Q 013943 407 IAQDIESCWKA 417 (433)
Q Consensus 407 ~a~~i~~~l~~ 417 (433)
+|.+|.+.|.+
T Consensus 326 aa~~i~~~l~~ 336 (338)
T 3itj_A 326 AALDAEKYLTS 336 (338)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999998875
No 13
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-36 Score=287.72 Aligned_cols=297 Identities=20% Similarity=0.245 Sum_probs=224.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
.++||+|||||++|+++|..|++.|++|+|||+++.+||.|... ++... ++..+.+ ......++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~-------~~~~~~~~~~ 69 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKY------IYDVAGF-------PKVYAKDLVK 69 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSE------ECCSTTC-------SSEEHHHHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCce------eeccCCC-------CCCCHHHHHH
Confidence 35899999999999999999999999999999999999888542 22111 1111111 1135678888
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC-CCccCCccCCCCCCCce
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA-EAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~-~p~~p~~~g~~~~~~~~ 190 (433)
++.+.+.+++++++++++|+.++..+ +.|+|.+.++ ..+.||+||+|||..+ .|..|+++|...+.+..
T Consensus 70 ~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~ 139 (335)
T 2zbw_A 70 GLVEQVAPFNPVYSLGERAETLEREG--DLFKVTTSQG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRG 139 (335)
T ss_dssp HHHHHHGGGCCEEEESCCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTT
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEECC--CEEEEEECCC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcE
Confidence 99888888899999999999999876 4788887664 5799999999999532 57777888876654433
Q ss_pred eeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHH
Q 013943 191 RHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLL 270 (433)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 270 (433)
++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+++.. ...+
T Consensus 140 ~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~~~-------------------~~~~--- 195 (335)
T 2zbw_A 140 VYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRAHE-------------------ASVK--- 195 (335)
T ss_dssp EESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCSCH-------------------HHHH---
T ss_pred EEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCccH-------------------HHHH---
Confidence 3332 223334568999999999999999999999999999999887 232210 0000
Q ss_pred HHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC----eEEEc---CC--c
Q 013943 271 LVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY----AVEFV---NG--R 339 (433)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~---~g--~ 339 (433)
.+.+.+++.+|+++.+ +.++..+ ++.+. +| +
T Consensus 196 --------------------------------------~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 237 (335)
T 2zbw_A 196 --------------------------------------ELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEEL 237 (335)
T ss_dssp --------------------------------------HHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEE
T ss_pred --------------------------------------HHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceE
Confidence 1123355568888877 6777654 57776 67 5
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc------cccchhhHHHHHHHHHh
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG------LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~------~~~a~~~g~~~a~~i~~ 413 (433)
++++|.||+|+|+.|+. .++.+.++..+ +|++.+| +.++++.|+||++|||+.. +..|..+|..+|++|.+
T Consensus 238 ~i~~D~vi~a~G~~p~~-~~l~~~~~~~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 238 ALEVDAVLILAGYITKL-GPLANWGLALE-KNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp EEECSEEEECCCEEEEC-GGGGGSCCCEE-TTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCEEEEeecCCCCc-hHhhhcceecc-CCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 69999999999999998 57777777664 7888888 5778999999999999842 33678899999999999
Q ss_pred hhcc
Q 013943 414 CWKA 417 (433)
Q Consensus 414 ~l~~ 417 (433)
.+..
T Consensus 315 ~l~~ 318 (335)
T 2zbw_A 315 YANP 318 (335)
T ss_dssp HHCT
T ss_pred Hhhh
Confidence 8875
No 14
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.4e-36 Score=280.62 Aligned_cols=284 Identities=16% Similarity=0.162 Sum_probs=223.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
++||+|||||++|+++|..|++.|++|+|+|++...+..+... ..++. .......++..+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-------------~~~~~-------~~~~~~~~~~~~ 61 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-------------HGFLG-------QDGKAPGEIIAE 61 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-------------CSSTT-------CTTCCHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-------------cCCcC-------CCCCCHHHHHHH
Confidence 5899999999999999999999999999999976443222110 00000 123567889999
Q ss_pred HHHHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 113 LEAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 113 l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
+.+.+.+. ++.+. .++|+.++.++ +.|.+.+.++ ..+.||+||+||| ..|..|.++|...+.+...
T Consensus 62 ~~~~~~~~~~v~~~-~~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~vviAtG--~~~~~~~~~g~~~~~~~~~ 128 (297)
T 3fbs_A 62 ARRQIERYPTIHWV-EGRVTDAKGSF--GEFIVEIDGG--------RRETAGRLILAMG--VTDELPEIAGLRERWGSAV 128 (297)
T ss_dssp HHHHHTTCTTEEEE-ESCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--CEEECCCCBTTGGGBTTTE
T ss_pred HHHHHHhcCCeEEE-EeEEEEEEEcC--CeEEEEECCC--------CEEEcCEEEECCC--CCCCCCCCCCchhhcCCee
Confidence 99988887 45543 56899999876 5688988876 6899999999999 7788888998877655566
Q ss_pred eccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHH
Q 013943 192 HTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLL 271 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 271 (433)
+.+.+.+.....+++++|||+|.+|+|+|..|.+.+ +|+++.+.+. .
T Consensus 129 ~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-~------------------------------- 175 (297)
T 3fbs_A 129 FHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-E------------------------------- 175 (297)
T ss_dssp ESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-C-------------------------------
T ss_pred EEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-C-------------------------------
Confidence 666555555667899999999999999999999998 9999987762 1
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC-eEEEcCCcEecccEEEEc
Q 013943 272 VVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY-AVEFVNGRCENFDAIILA 349 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~-~v~~~~g~~~~~D~vi~a 349 (433)
+...+.+.+++.+|+++.. +.++..+ .+.+.+|+++++|.||+|
T Consensus 176 ----------------------------------~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a 221 (297)
T 3fbs_A 176 ----------------------------------PDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQ 221 (297)
T ss_dssp ----------------------------------CCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEEC
T ss_pred ----------------------------------CCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEc
Confidence 1111224456678888764 8888876 789999999999999999
Q ss_pred cCCCCCCCCcccccccccc--CCC-CcCCCCCCCCCCCCceEEeeecccc---cccchhhHHHHHHHHHhhhccC
Q 013943 350 TGYRSNVPSWLKESEMFSR--KDG-LPRRPFPNGWKGESGLYSVGFTKRG---LLGVAMDAKRIAQDIESCWKAK 418 (433)
Q Consensus 350 tG~~~~~~~~~~~~~l~~~--~~g-~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~~g~~~a~~i~~~l~~~ 418 (433)
+|+.|+. .++++.++..+ .+| ++.+| +.++++.|+||++|||+.. +..|..+|+.+|.+|.+.+...
T Consensus 222 ~G~~p~~-~~~~~~g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 222 PKLRITV-DWIEKLGCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp CEEECCC-SCHHHHTCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCcccCc-hhHHhcCCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 9999998 57777777654 357 88888 6688999999999999974 4478999999999999988754
No 15
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.7e-36 Score=284.22 Aligned_cols=288 Identities=18% Similarity=0.230 Sum_probs=219.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
||||+|||||++|+++|..|++.|+ +|+++|++ .+||.|..... ...++ .++......++.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~ 63 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYP------GVKEVVSGLDFMQ 63 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCST------TCCSCBCHHHHHH
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCC------CCcccCCHHHHHH
Confidence 5799999999999999999999999 99999995 57777654210 00011 1122357788999
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
++.+.+.+.++++++ ++|++++..+ +.|++.+.++ ..+.||+||+||| +.+..|+++|...+.+..+
T Consensus 64 ~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~~~g~~~~~~~~~ 130 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEM-TAVQRVSKKD--SHFVILAEDG--------KTFEAKSVIIATG--GSPKRTGIKGESEYWGKGV 130 (311)
T ss_dssp HHHHHHHTTSCEEEC-SCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTHHHHBTTTE
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEEcC--CEEEEEEcCC--------CEEECCEEEECCC--CCCCCCCCCChhhccCCcE
Confidence 999999988999877 7899999876 5677877665 5899999999999 7788888888654433345
Q ss_pred eccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHH
Q 013943 192 HTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLL 271 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 271 (433)
+.+...+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +..
T Consensus 131 ~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~----------------------------- 180 (311)
T 2q0l_A 131 STCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG-FRC----------------------------- 180 (311)
T ss_dssp ESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS-CCS-----------------------------
T ss_pred EEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc-cCC-----------------------------
Confidence 54433333345679999999999999999999999999999988872 210
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhh-cCCeEEecC--ceEEeCC-----eEEEc---CCc-
Q 013943 272 VVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIK-SGHIRVFPG--IKRLKRY-----AVEFV---NGR- 339 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~~~~~-----~v~~~---~g~- 339 (433)
+..+.+.+. +.+|+++.+ +.++..+ ++.+. +|+
T Consensus 181 -----------------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~ 225 (311)
T 2q0l_A 181 -----------------------------------APITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEK 225 (311)
T ss_dssp -----------------------------------CHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred -----------------------------------CHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCce
Confidence 000112232 358888876 6777543 46665 665
Q ss_pred -EecccEEEEccCCCCCCCCcccccc----ccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHH
Q 013943 340 -CENFDAIILATGYRSNVPSWLKESE----MFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQD 410 (433)
Q Consensus 340 -~~~~D~vi~atG~~~~~~~~~~~~~----l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~ 410 (433)
++++|.||+|+|+.|+. .+++..+ +..+++|++.+| +.++++.|+||++|||+.. +..|..+|+.+|.+
T Consensus 226 ~~i~~D~vi~a~G~~p~~-~~l~~~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 303 (311)
T 2q0l_A 226 RELVVPGFFIFVGYDVNN-AVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALS 303 (311)
T ss_dssp EEEECSEEEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHH
T ss_pred EEEecCEEEEEecCccCh-hhhhcccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHH
Confidence 68999999999999998 6777664 666678999999 6788899999999999863 44789999999999
Q ss_pred HHhhhcc
Q 013943 411 IESCWKA 417 (433)
Q Consensus 411 i~~~l~~ 417 (433)
|.+.+..
T Consensus 304 i~~~l~~ 310 (311)
T 2q0l_A 304 VISYLEH 310 (311)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988753
No 16
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=5.3e-36 Score=282.45 Aligned_cols=291 Identities=18% Similarity=0.200 Sum_probs=225.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEE-EecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSIL-LERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~i-ie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
.++||+|||||++|+++|..|++.|++|++ +|+ +.+||.|..... +..++ .++......++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~-------------~~~~~---~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE-------------IENYP---GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC-------------BCCST---TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece-------------eccCC---CCCCCCCHHHHH
Confidence 579999999999999999999999999999 999 678888755310 01111 112235788999
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
.++.+++.+.+++++++ +|+++ .++..+.|+++...+ . .+.||+||+||| +.|..|.++|...+.+..
T Consensus 66 ~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~-------~-~~~~d~lvlAtG--~~~~~~~~~g~~~~~~~~ 133 (315)
T 3r9u_A 66 APWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGG-------K-TELAKAVIVCTG--SAPKKAGFKGEDEFFGKG 133 (315)
T ss_dssp HHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTS-------C-EEEEEEEEECCC--EEECCCCCBTTTTTBTTT
T ss_pred HHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecC-------C-EEEeCEEEEeeC--CCCCCCCCCChhhcCCCe
Confidence 99999999999998887 89888 655324566544443 2 889999999999 788888999988776666
Q ss_pred eeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHH
Q 013943 191 RHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLL 270 (433)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 270 (433)
++.+.+.+.....+++++|||+|.+|+|+|..|.+.+.+|+++.+.+. +... ...
T Consensus 134 ~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~-~~~~-------------------~~~----- 188 (315)
T 3r9u_A 134 VSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE-FRAA-------------------PST----- 188 (315)
T ss_dssp EESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS-CBSC-------------------HHH-----
T ss_pred EEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC-CCCC-------------------HHH-----
Confidence 777665555556789999999999999999999999999999998873 2110 000
Q ss_pred HHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe-----EEEc--CCc--
Q 013943 271 LVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA-----VEFV--NGR-- 339 (433)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-----v~~~--~g~-- 339 (433)
..+.+++.+|+++.+ +.++..++ +.+. +|+
T Consensus 189 ---------------------------------------~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~ 229 (315)
T 3r9u_A 189 ---------------------------------------VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIR 229 (315)
T ss_dssp ---------------------------------------HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEE
T ss_pred ---------------------------------------HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeE
Confidence 012234678888876 67765432 6665 776
Q ss_pred EecccEEEEccCCCCCCCCcccc---cc-ccccCCCCcCCCCCCCCCCCCceEEeeeccc----ccccchhhHHHHHHHH
Q 013943 340 CENFDAIILATGYRSNVPSWLKE---SE-MFSRKDGLPRRPFPNGWKGESGLYSVGFTKR----GLLGVAMDAKRIAQDI 411 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~---~~-l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~----~~~~a~~~g~~~a~~i 411 (433)
++++|.||+|+|+.|+. .++.. .+ +..+++|++.+| +.++++.|+|||+|||+. .+..|..+|+.+|.+|
T Consensus 230 ~~~~D~vv~a~G~~p~~-~~~~~~~~~g~l~~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i 307 (315)
T 3r9u_A 230 DLNVPGIFTFVGLNVRN-EILKQDDSKFLCNMEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSA 307 (315)
T ss_dssp EECCSCEEECSCEEECC-GGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHH
T ss_pred EeecCeEEEEEcCCCCc-hhhhcccccceeeecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHH
Confidence 69999999999999998 56655 34 766778999999 578889999999999974 2457899999999999
Q ss_pred Hhhhcc
Q 013943 412 ESCWKA 417 (433)
Q Consensus 412 ~~~l~~ 417 (433)
.+.+.+
T Consensus 308 ~~~l~~ 313 (315)
T 3r9u_A 308 MAYIES 313 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
No 17
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=1e-35 Score=281.23 Aligned_cols=287 Identities=18% Similarity=0.224 Sum_probs=215.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
..+||+|||||++|+++|..|++.|++|+++|+. .+||.|.... . ...++. + ......++.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~--~--------~~~~~~------~-~~~~~~~~~~ 76 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAP--L--------VENYLG------F-KSIVGSELAK 76 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCS--C--------BCCBTT------B-SSBCHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccc--h--------hhhcCC------C-cccCHHHHHH
Confidence 3489999999999999999999999999999994 5777664321 0 000111 0 1245678888
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
++.+.+.+.++++++ .+|+.++..+ +.|+|.+ ++ ..+.||+||+||| +.+..|++++...+.+...
T Consensus 77 ~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~-~~--------~~~~~~~li~AtG--~~~~~~~i~g~~~~~~~~~ 142 (319)
T 3cty_A 77 LFADHAANYAKIREG-VEVRSIKKTQ--GGFDIET-ND--------DTYHAKYVIITTG--TTHKHLGVKGESEYFGKGT 142 (319)
T ss_dssp HHHHHHHTTSEEEET-CCEEEEEEET--TEEEEEE-SS--------SEEEEEEEEECCC--EEECCCCCBTTTTTBTTTE
T ss_pred HHHHHHHHcCCEEEE-eeEEEEEEeC--CEEEEEE-CC--------CEEEeCEEEECCC--CCcccCCCCChHHhCCceE
Confidence 898888888888777 6899998876 5677766 33 4789999999999 7788888888765544444
Q ss_pred eccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHH
Q 013943 192 HTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLL 271 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 271 (433)
+.....+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|.+. +.+.
T Consensus 143 ~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~-~~~~---------------------------- 193 (319)
T 3cty_A 143 SYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK-YMCE---------------------------- 193 (319)
T ss_dssp ESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS-CCSC----------------------------
T ss_pred EEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc-cCCC----------------------------
Confidence 44333333345678999999999999999999999999999988772 2110
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-----eEEEc---CCc--
Q 013943 272 VVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-----AVEFV---NGR-- 339 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~---~g~-- 339 (433)
..+.+.+.+.+|+++.+ +.++..+ ++.+. +|+
T Consensus 194 ------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~ 237 (319)
T 3cty_A 194 ------------------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEK 237 (319)
T ss_dssp ------------------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEE
T ss_pred ------------------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceE
Confidence 00112233456777665 6666543 36664 565
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHhhh
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~~l 415 (433)
++++|.||+|+|+.|+. .++++.++..+++|++.+| +.++++.|+||++|||+.. +..|..+|+.+|.+|.+.+
T Consensus 238 ~i~~D~vi~a~G~~p~~-~~l~~~gl~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 315 (319)
T 3cty_A 238 LIETDGVFIYVGLIPQT-SFLKDSGVKLDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDS 315 (319)
T ss_dssp EECCSEEEECCCEEECC-GGGTTSCCCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCEEEEeeCCccCh-HHHhhccccccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999998 6788777777778999999 5688999999999999864 3468999999999999988
Q ss_pred cc
Q 013943 416 KA 417 (433)
Q Consensus 416 ~~ 417 (433)
..
T Consensus 316 ~~ 317 (319)
T 3cty_A 316 IS 317 (319)
T ss_dssp TC
T ss_pred hc
Confidence 65
No 18
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-35 Score=283.10 Aligned_cols=289 Identities=19% Similarity=0.209 Sum_probs=217.8
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
...+||+|||||++|+++|..|++.|++|+++|+. .+||.|..... ...++. ++......++.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~ 74 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELM 74 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHH
Confidence 45689999999999999999999999999999976 67777644210 001111 11124578889
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEE-EEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCc
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRV-KTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGD 189 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v-~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~ 189 (433)
+++.+.+.+.++++++++ |++++. . +.|+| .+.++ ..+.||+||+||| +++..|+++|...+.+.
T Consensus 75 ~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~v~~~~~g--------~~~~~d~lviAtG--~~~~~~~i~g~~~~~~~ 140 (335)
T 2a87_A 75 DEMREQALRFGADLRMED-VESVSL-H--GPLKSVVTADG--------QTHRARAVILAMG--AAARYLQVPGEQELLGR 140 (335)
T ss_dssp HHHHHHHHHTTCEEECCC-EEEEEC-S--SSSEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTHHHHTBTT
T ss_pred HHHHHHHHHcCCEEEEee-EEEEEe-C--CcEEEEEeCCC--------CEEEeCEEEECCC--CCccCCCCCchHhccCC
Confidence 999999999999988886 888887 3 45677 66654 6899999999999 67888888876554444
Q ss_pred eeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHH
Q 013943 190 IRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKL 269 (433)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~ 269 (433)
.++.+...+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +...
T Consensus 141 ~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~-~~~~-------------------------- 193 (335)
T 2a87_A 141 GVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE-FRAS-------------------------- 193 (335)
T ss_dssp TEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS-CSSC--------------------------
T ss_pred ceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc-CCcc--------------------------
Confidence 4555433333335689999999999999999999999999999988872 2110
Q ss_pred HHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhh-hhhhcCCeEEecC--ceEEeCCe----EEEc---CC-
Q 013943 270 LLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTL-AKIKSGHIRVFPG--IKRLKRYA----VEFV---NG- 338 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~~----v~~~---~g- 338 (433)
..+. +.+++.+|+++.+ +.++..++ +.+. +|
T Consensus 194 --------------------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~ 235 (335)
T 2a87_A 194 --------------------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGA 235 (335)
T ss_dssp --------------------------------------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSC
T ss_pred --------------------------------------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCc
Confidence 0001 2234578888876 77776553 6665 35
Q ss_pred -cEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHh
Q 013943 339 -RCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 339 -~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~ 413 (433)
+++++|.||+|+|+.|+. .++. .++..+++|++.+|...++++.|+|||+|||+.. ...|..+|+.+|.+|.+
T Consensus 236 ~~~i~~D~vi~a~G~~p~~-~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 236 ETTLPVTGVFVAIGHEPRS-GLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp CEEECCSCEEECSCEEECC-TTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEeecCEEEEccCCccCh-hHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHH
Confidence 469999999999999998 5665 4565567899999954578999999999999864 34689999999999998
Q ss_pred hhcc
Q 013943 414 CWKA 417 (433)
Q Consensus 414 ~l~~ 417 (433)
.+..
T Consensus 314 ~l~~ 317 (335)
T 2a87_A 314 WLAE 317 (335)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8865
No 19
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5.4e-36 Score=281.24 Aligned_cols=287 Identities=15% Similarity=0.176 Sum_probs=209.7
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
++.|||+||||||||++||..|++.|++|+|||++. .||.+..+ ++ .+... ......++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~~--------------~~~~~----~~~~~~~~~ 63 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-SH--------------GFITR----DGIKPEEFK 63 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-BC--------------CSTTC----TTBCHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-cC--------------CccCC----CCCCHHHHH
Confidence 457999999999999999999999999999999975 45543221 11 11100 113556777
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
+...+.+.+++...+....++.+....+ ..|++.+.++ .++.||+|||||| ++|+.|++||.+.+.+..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g--------~~~~a~~liiATG--s~p~~p~i~G~~~~~~~~ 132 (304)
T 4fk1_A 64 EIGLNEVMKYPSVHYYEKTVVMITKQST-GLFEIVTKDH--------TKYLAERVLLATG--MQEEFPSIPNVREYYGKS 132 (304)
T ss_dssp HHHHHHHTTSTTEEEEECCEEEEEECTT-SCEEEEETTC--------CEEEEEEEEECCC--CEEECCSCTTHHHHBTTT
T ss_pred HHHHHHHHhcCCEEEEeeEEEEeeecCC-CcEEEEECCC--------CEEEeCEEEEccC--CccccccccCccccccce
Confidence 6666666666555556666777766554 5678888876 7899999999999 889999999977655555
Q ss_pred eeccCCCCCCCCCCCeEEEECCCCc-HHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHH
Q 013943 191 RHTSLYKSGEDFRGKRVLVVGCGNS-GMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKL 269 (433)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~VvG~G~~-a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~ 269 (433)
++.+...+.....+++++|||+|.. +.|+|..+.+.+.+|+++.+.+. ..+
T Consensus 133 v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~-~~~--------------------------- 184 (304)
T 4fk1_A 133 LFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE-LSQ--------------------------- 184 (304)
T ss_dssp EESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC-CCH---------------------------
T ss_pred eeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEecccc-chh---------------------------
Confidence 6665555555667888999988865 57788888888889998876651 110
Q ss_pred HHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC-----eEEEcCCcEecc
Q 013943 270 LLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY-----AVEFVNGRCENF 343 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~-----~v~~~~g~~~~~ 343 (433)
...+.+.+.++.++.. +..+..+ .+.+.+|+++++
T Consensus 185 ---------------------------------------~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~ 225 (304)
T 4fk1_A 185 ---------------------------------------TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIER 225 (304)
T ss_dssp ---------------------------------------HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECC
T ss_pred ---------------------------------------hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeee
Confidence 0112233344555444 4444432 478899999999
Q ss_pred cEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHhhhcc
Q 013943 344 DAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 344 D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~~l~~ 417 (433)
|.+|+++|..|+. .++.+.++..+++|++.+| ++++|+.|+|||+|||+.. +..|+.+|+.+|..|.++|.+
T Consensus 226 ~~~vi~~g~~~~~-~~~~~~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 226 AGGFIVPTFFRPN-QFIEQLGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CEEEECCEEECSS-CHHHHTTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeccccCC-hhhhhcCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998888887776 5788888888889999999 7889999999999999842 457899999999999998864
No 20
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5e-35 Score=275.73 Aligned_cols=285 Identities=18% Similarity=0.235 Sum_probs=202.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc-cccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL-KTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
.|||+||||||||++||..|++.|++|+|||+.. +||.... ...+ .++.+ ......++..
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~-----------~~p~~-------~~~~~~~~~~ 66 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVE-----------NFPGF-------EMITGPDLST 66 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBC-----------CSTTC-------SSBCHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccC-----------CcCCc-------cccchHHHHH
Confidence 3999999999999999999999999999999864 6664322 1111 01111 1235677777
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
.......+....+..+..+....... .. +...++ .+++||+||+||| ++|+.|++||.+.+.+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~--------~~~~~d~liiAtG--s~~~~~~ipG~~~~~~~~v 132 (312)
T 4gcm_A 67 KMFEHAKKFGAVYQYGDIKSVEDKGE---YK-VINFGN--------KELTAKAVIIATG--AEYKKIGVPGEQELGGRGV 132 (312)
T ss_dssp HHHHHHHHTTCEEEECCCCEEEECSS---CE-EEECSS--------CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTE
T ss_pred HHHHHHhhccccccceeeeeeeeeec---ce-eeccCC--------eEEEeceeEEccc--CccCcCCCCChhhhCCccE
Confidence 77777777777666665554444322 22 333443 6899999999999 8899999999887776666
Q ss_pred eccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHH
Q 013943 192 HTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLL 271 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 271 (433)
+.+...+.....+++++|||+|++|+|+|..|++.|.+||++.|++ ++++.... .
T Consensus 133 ~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~-------------------~----- 187 (312)
T 4gcm_A 133 SYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRIL-------------------Q----- 187 (312)
T ss_dssp ESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHH-------------------H-----
T ss_pred EeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhH-------------------H-----
Confidence 6666655566778999999999999999999999999999999988 44432110 0
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEE--eCC-----eEE-E--cCCc
Q 013943 272 VVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRL--KRY-----AVE-F--VNGR 339 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~--~~~-----~v~-~--~~g~ 339 (433)
...+...++..... +... .+. ... . .++.
T Consensus 188 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (312)
T 4gcm_A 188 ---------------------------------------DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEE 228 (312)
T ss_dssp ---------------------------------------HHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred ---------------------------------------HHHHHhcCcceeeecceeeeeccccccccceeeeecCCcee
Confidence 01112222332222 1100 010 011 1 2345
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHhhh
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~~l 415 (433)
.+++|.|++++|..|+. .++...++.. ++|++++| +.++|+.|+|||+|||+.. +..|..+|+.+|++|.++|
T Consensus 229 ~~~~d~v~~~~g~~~~~-~~~~~~g~~~-~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 229 THEADGVFIYIGMKPLT-APFKDLGITN-DVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp EEECSEEEECSCEEESC-GGGGGGTCBC-TTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeeeEEeecCCCcCc-hhHHhcceec-CCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998 6777777754 78999999 7889999999999999852 4478999999999999887
Q ss_pred cc
Q 013943 416 KA 417 (433)
Q Consensus 416 ~~ 417 (433)
+.
T Consensus 306 ~~ 307 (312)
T 4gcm_A 306 EH 307 (312)
T ss_dssp HH
T ss_pred Hh
Confidence 63
No 21
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.1e-35 Score=280.37 Aligned_cols=294 Identities=17% Similarity=0.216 Sum_probs=201.3
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
+++|||+||||||||++||..|++.|++|+|||+....|..+. .+.+. ......++ .++......++.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~-G~~~~-----~~~i~~~~------g~~~~i~~~~l~ 69 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG-GQLTT-----TTIIENFP------GFPNGIDGNELM 69 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT-CGGGG-----SSEECCST------TCTTCEEHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC-CCcCC-----hHHhhhcc------CCcccCCHHHHH
Confidence 4789999999999999999999999999999999753222221 11110 01111111 112234678888
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
..+.+.+.+.+..+... .+....... ..+.+.+.++ ..+.||+||+||| ++|+.|++||.+.+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~~~~~~~--------~~~~~~~liiATG--~~~~~~~ipG~~~~~~~~ 136 (314)
T 4a5l_A 70 MNMRTQSEKYGTTIITE-TIDHVDFST--QPFKLFTEEG--------KEVLTKSVIIATG--ATAKRMHVPGEDKYWQNG 136 (314)
T ss_dssp HHHHHHHHHTTCEEECC-CEEEEECSS--SSEEEEETTC--------CEEEEEEEEECCC--EEECCCCCTTHHHHBTTT
T ss_pred HHHHHHHhhcCcEEEEe-EEEEeecCC--CceEEEECCC--------eEEEEeEEEEccc--ccccccCCCccccccccc
Confidence 88999898888776554 465555544 4455666654 7899999999999 889999999976554444
Q ss_pred eeccCCCCC--CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHH
Q 013943 191 RHTSLYKSG--EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDK 268 (433)
Q Consensus 191 ~~~~~~~~~--~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (433)
.+.+...+. ..+.+++++|||+|++|+|+|..|++.|.+||++.|.+... +... ..
T Consensus 137 ~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~-~~~~-------------------~~-- 194 (314)
T 4a5l_A 137 VSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR-ASKT-------------------MQ-- 194 (314)
T ss_dssp EESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-SCHH-------------------HH--
T ss_pred eeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc-ccch-------------------hh--
Confidence 555444332 23568999999999999999999999999999999877321 1100 00
Q ss_pred HHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC-----CeEEE-----c
Q 013943 269 LLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR-----YAVEF-----V 336 (433)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~-----~~v~~-----~ 336 (433)
.+.....++..+.. +.++.. .++.+ .
T Consensus 195 ------------------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (314)
T 4a5l_A 195 ------------------------------------------ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSG 232 (314)
T ss_dssp ------------------------------------------HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTC
T ss_pred ------------------------------------------hhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccc
Confidence 01111122222222 122211 12222 3
Q ss_pred CCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHH
Q 013943 337 NGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIE 412 (433)
Q Consensus 337 ~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~ 412 (433)
+++++++|.|++|+|+.||+ .++... +..+++|+++ | +.++|+.|+|||+|||+.. +..|+.+|+.+|.++.
T Consensus 233 ~~~~i~~d~vi~a~G~~pn~-~~l~~~-~~~~~~G~iv-~-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 233 EYKVVPVAGLFYAIGHSPNS-KFLGGQ-VKTADDGYIL-T-EGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp CEEEEECSEEEECSCEEESC-GGGTTS-SCBCTTSCBC-C-BTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cceeeccccceEecccccCh-hHhccc-ceEcCCeeEe-C-CCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 45679999999999999998 566543 4445788774 4 3789999999999999864 3468899999999999
Q ss_pred hhhcc
Q 013943 413 SCWKA 417 (433)
Q Consensus 413 ~~l~~ 417 (433)
++|+.
T Consensus 309 ~yL~~ 313 (314)
T 4a5l_A 309 KWLQT 313 (314)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 98864
No 22
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=4.7e-35 Score=275.60 Aligned_cols=287 Identities=19% Similarity=0.240 Sum_probs=217.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
|||+|||||++|+++|..|++.|++|+++|+ ..||.|.... .+..+. ...+....++..++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~-------------~~~~~~----~~~~~~~~~~~~~~ 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV-------------DIENYI----SVPKTEGQKLAGAL 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC-------------EECCBT----TBSSEEHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc-------------cccccc----CcCCCCHHHHHHHH
Confidence 7899999999999999999999999999986 4778775421 000000 01124567889999
Q ss_pred HHHHHHcCCcceecceEEEEEEeCC-CCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCceee
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDAT-IRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIRH 192 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~-~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~~ 192 (433)
.+++++.+++++++++|+.++.+.+ ...|.+++.++ ..+.||+||+||| ++|..|++||.+.+.+...+
T Consensus 63 ~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~~ 132 (310)
T 1fl2_A 63 KVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG--------AVLKARSIIVATG--AKWRNMNVPGEDQYRTKGVT 132 (310)
T ss_dssp HHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTTBTTTEE
T ss_pred HHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhcccceeE
Confidence 9999989999999999999987532 23688888765 5799999999999 67777888887766554455
Q ss_pred ccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHH
Q 013943 193 TSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLV 272 (433)
Q Consensus 193 ~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 272 (433)
.+...+.....+++++|||+|.+|+|+|..|++.+.+|+++.|.+. +..
T Consensus 133 ~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~------------------------------ 181 (310)
T 1fl2_A 133 YCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MKA------------------------------ 181 (310)
T ss_dssp SCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS-CCS------------------------------
T ss_pred EeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc-cCc------------------------------
Confidence 5433333345688999999999999999999999999999998873 100
Q ss_pred HHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhc-CCeEEecC--ceEEeCC-----eEEEcC---Cc--
Q 013943 273 VSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKS-GHIRVFPG--IKRLKRY-----AVEFVN---GR-- 339 (433)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~-----~v~~~~---g~-- 339 (433)
+..+.+.+.+ .+|+++.+ +.++..+ ++.+.+ |+
T Consensus 182 ----------------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~ 227 (310)
T 1fl2_A 182 ----------------------------------DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIH 227 (310)
T ss_dssp ----------------------------------CHHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEE
T ss_pred ----------------------------------cHHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEE
Confidence 0001122333 57888876 6777643 466653 53
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHhhh
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~~l 415 (433)
++++|.||+|+|+.|+. .++.+. +..+++|++.+| +.++++.|+|||+|||+.. +..|..+|+.+|.+|...+
T Consensus 228 ~i~~D~vi~a~G~~p~~-~~l~~~-l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 228 NIELAGIFVQIGLLPNT-NWLEGA-VERNRMGEIIID-AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp EEECSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCEEEEeeCCccCc-hHHhcc-ccccCCCcEEcC-CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHH
Confidence 58999999999999998 566653 555678999999 5677999999999999974 3468999999999999988
Q ss_pred cc
Q 013943 416 KA 417 (433)
Q Consensus 416 ~~ 417 (433)
..
T Consensus 305 ~~ 306 (310)
T 1fl2_A 305 IR 306 (310)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 23
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.2e-34 Score=275.70 Aligned_cols=290 Identities=18% Similarity=0.186 Sum_probs=216.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEec----CCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLER----SNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQ 108 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~----~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
.+||+|||||++|+++|..|++.|++|+++|+ ....||.|.... ....++ .++......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFP------GFPEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCST------TCTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCC------CCccCCCHHH
Confidence 48999999999999999999999999999999 455666554321 000111 1112235678
Q ss_pred HHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCC---
Q 013943 109 FVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDE--- 185 (433)
Q Consensus 109 ~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~--- 185 (433)
+..++.+.+.+.+++++.++ |+.++... +.|+|++ ++ ..++||+||+||| +++..|+++|...
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~v~~-~~--------~~~~~~~vv~A~G--~~~~~~~~~g~~~~~~ 137 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFKLFT-DS--------KAILADAVILAIG--AVAKRLSFVGSGEVLG 137 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEEEEC-SS--------EEEEEEEEEECCC--EEECCCCCBTCSSSSS
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEEEEE-CC--------cEEEcCEEEECCC--CCcCCCCCCCcccccc
Confidence 89999999999999988876 88888765 5677776 54 6899999999999 6788888888765
Q ss_pred -CCCceeeccCCCCCCC--CCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcc
Q 013943 186 -FGGDIRHTSLYKSGED--FRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLP 262 (433)
Q Consensus 186 -~~~~~~~~~~~~~~~~--~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~ 262 (433)
+.+..++.+...+... ..+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~------------------- 197 (333)
T 1vdc_A 138 GFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA-FRAS------------------- 197 (333)
T ss_dssp CCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS-CCSC-------------------
T ss_pred ccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc-CCcc-------------------
Confidence 4334455443333222 5689999999999999999999999999999998872 2110
Q ss_pred hHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhh-hhhhcCCeEEecC--ceEEeCCe-------
Q 013943 263 MRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTL-AKIKSGHIRVFPG--IKRLKRYA------- 332 (433)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~~~~~~------- 332 (433)
..+. +.+++.+|+++.+ +.++..++
T Consensus 198 ---------------------------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~ 232 (333)
T 1vdc_A 198 ---------------------------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGG 232 (333)
T ss_dssp ---------------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEE
T ss_pred ---------------------------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceee
Confidence 0001 2234568888876 77775432
Q ss_pred EEEc---CC--cEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhh
Q 013943 333 VEFV---NG--RCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMD 403 (433)
Q Consensus 333 v~~~---~g--~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~ 403 (433)
+.+. +| +++++|.||+|+|+.|+. .+++ .++..+++|++.+|..+++|+.|+|||+|||+.. ...|..+
T Consensus 233 v~~~~~~~g~~~~i~~D~vi~a~G~~p~~-~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~ 310 (333)
T 1vdc_A 233 LKVKNVVTGDVSDLKVSGLFFAIGHEPAT-KFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGT 310 (333)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESC-GGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHH
T ss_pred EEEEecCCCceEEEecCEEEEEeCCccch-HHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHh
Confidence 6665 45 468999999999999998 5665 3565567899999854568899999999999864 3468999
Q ss_pred HHHHHHHHHhhhccCC
Q 013943 404 AKRIAQDIESCWKAKA 419 (433)
Q Consensus 404 g~~~a~~i~~~l~~~~ 419 (433)
|+.+|.+|.+.+....
T Consensus 311 g~~aa~~i~~~l~~~~ 326 (333)
T 1vdc_A 311 GCMAALDAEHYLQEIG 326 (333)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999886544
No 24
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.6e-35 Score=277.57 Aligned_cols=292 Identities=19% Similarity=0.265 Sum_probs=216.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
..+||+|||||++|+++|..|++.|++|+++|+. .+||.|..... ...++ .++......++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~ 66 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWP------GDPNDLTGPLLME 66 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCST------TCCSSCBHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCC------CCCCCCCHHHHHH
Confidence 3589999999999999999999999999999975 57776643210 00011 1112246788899
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
++.+.+.+.++++++++ |+.++... +.|++ +.++ ..+.||+||+||| ++|..|+++|...+.+..+
T Consensus 67 ~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~v-~~~~--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~~~~~~ 132 (320)
T 1trb_A 67 RMHEHATKFETEIIFDH-INKVDLQN--RPFRL-NGDN--------GEYTCDALIIATG--ASARYLGLPSEEAFKGRGV 132 (320)
T ss_dssp HHHHHHHHTTCEEECCC-EEEEECSS--SSEEE-EESS--------CEEEEEEEEECCC--EEECCCCCHHHHHTBTTTE
T ss_pred HHHHHHHHCCCEEEEee-eeEEEecC--CEEEE-EeCC--------CEEEcCEEEECCC--CCcCCCCCCChHHhCCcee
Confidence 99999999999988885 88888755 56777 5554 6799999999999 6788888887654444445
Q ss_pred eccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHH
Q 013943 192 HTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLL 271 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 271 (433)
+.+...+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|.+. +.+. +.+.
T Consensus 133 ~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~-------------------~~~~----- 187 (320)
T 1trb_A 133 SACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG-FRAE-------------------KILI----- 187 (320)
T ss_dssp ESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCCC-------------------HHHH-----
T ss_pred EecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc-cccC-------------------HHHH-----
Confidence 54433333345688999999999999999999999999999998872 2110 0000
Q ss_pred HHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe-----EEEcC----C--
Q 013943 272 VVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA-----VEFVN----G-- 338 (433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-----v~~~~----g-- 338 (433)
..+.+.+++.+|+++.+ +.++..++ +.+.+ |
T Consensus 188 ------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~ 231 (320)
T 1trb_A 188 ------------------------------------KRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNI 231 (320)
T ss_dssp ------------------------------------HHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCC
T ss_pred ------------------------------------HHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCce
Confidence 01123355678998876 77776443 77754 4
Q ss_pred cEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCC----CCCCCCceEEeeecccc----cccchhhHHHHHHH
Q 013943 339 RCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPN----GWKGESGLYSVGFTKRG----LLGVAMDAKRIAQD 410 (433)
Q Consensus 339 ~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~----~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~ 410 (433)
+++++|.||+|+|+.|+. .+++ .++..+ +|++.+|..+ +.++.|+||++|||+.. +..|..+|+.+|.+
T Consensus 232 ~~i~~D~vv~a~G~~p~~-~~~~-~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~ 308 (320)
T 1trb_A 232 ESLDVAGLFVAIGHSPNT-AIFE-GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALD 308 (320)
T ss_dssp EEEECSEEEECSCEEESC-GGGT-TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEEEeCCCCCh-HHhc-cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHH
Confidence 469999999999999998 5665 345556 8999998432 37899999999999864 34689999999999
Q ss_pred HHhhhccC
Q 013943 411 IESCWKAK 418 (433)
Q Consensus 411 i~~~l~~~ 418 (433)
|...|...
T Consensus 309 i~~~l~~~ 316 (320)
T 1trb_A 309 AERYLDGL 316 (320)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHhc
Confidence 99998764
No 25
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.6e-34 Score=273.54 Aligned_cols=310 Identities=19% Similarity=0.201 Sum_probs=216.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCcccccccCceeeecCC---ceeecCCCCC--CCC------C
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERSNCIASLWQLKTYDRLRLHLPK---QFCELPLMGF--PSE------F 100 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~---~~~~~~~~~~--~~~------~ 100 (433)
.+||+|||||++|+++|..|++.|+ +|+|||+++ +||.|...... .....+. ..+.+..+.. +.. .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999999 999999998 89887542111 1111111 1111111100 000 0
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCc
Q 013943 101 PTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEI 180 (433)
Q Consensus 101 ~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~ 180 (433)
..++...++..++.+++++.+++++++++|++++..+ +.|+|.+.++ .+.||+||+|||.++.|. +
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~g---------~~~~d~vVlAtG~~~~p~---i 147 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIATTTE---------TYHADYIFVATGDYNFPK---K 147 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESSC---------CEEEEEEEECCCSTTSBC---C
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEEeCCC---------EEEeCEEEECCCCCCccC---C
Confidence 2346778899999999999999999999999999875 4677877642 589999999999655544 4
Q ss_pred cCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceec-ccccCCcchhhhHHHHh
Q 013943 181 EGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLP-QEMLGKSTFGLSMWLLK 259 (433)
Q Consensus 181 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp-~~~~~~~~~~~~~~~~~ 259 (433)
|+ +...|...+.+...+.+++|+|||+|.+|+|+|..|.+.|.+|+++.|++ .+++ ..+...
T Consensus 148 p~-----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~-~~~~~~~d~~~----------- 210 (369)
T 3d1c_A 148 PF-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT-GLNDPDADPSV----------- 210 (369)
T ss_dssp CS-----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------CTT-----------
T ss_pred CC-----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC-CCCCCCCCCCc-----------
Confidence 43 24567666665555678899999999999999999999999999999988 3332 111100
Q ss_pred hcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCC-eEEecC--ceEE--eCC--e
Q 013943 260 WLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGH-IRVFPG--IKRL--KRY--A 332 (433)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~--v~~~--~~~--~ 332 (433)
.+++...+ .+.+.+++.+ |+++.+ |.++ +++ .
T Consensus 211 ~~~~~~~~-----------------------------------------~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~ 249 (369)
T 3d1c_A 211 RLSPYTRQ-----------------------------------------RLGNVIKQGARIEMNVHYTVKDIDFNNGQYH 249 (369)
T ss_dssp SCCHHHHH-----------------------------------------HHHHHHHTTCCEEEECSCCEEEEEEETTEEE
T ss_pred cCCHHHHH-----------------------------------------HHHHHHhhCCcEEEecCcEEEEEEecCCceE
Confidence 01111111 1123345564 888876 7777 444 3
Q ss_pred EEEcCCcEec-ccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccccc-------ccchhhH
Q 013943 333 VEFVNGRCEN-FDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL-------LGVAMDA 404 (433)
Q Consensus 333 v~~~~g~~~~-~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-------~~a~~~g 404 (433)
+.+.+|+++. +|.||+|||+.|+. .++.+.++. +++|++.++..++.++.|+||++||++... ..+..+|
T Consensus 250 v~~~~g~~~~~~d~vi~a~G~~~~~-~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a 327 (369)
T 3d1c_A 250 ISFDSGQSVHTPHEPILATGFDATK-NPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARF 327 (369)
T ss_dssp EEESSSCCEEESSCCEECCCBCGGG-SHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGH
T ss_pred EEecCCeEeccCCceEEeeccCCcc-chhhhhhcc-CCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHH
Confidence 6778888765 69999999999998 455554555 578888888556788999999999998531 1356789
Q ss_pred HHHHHHHHhhhccC
Q 013943 405 KRIAQDIESCWKAK 418 (433)
Q Consensus 405 ~~~a~~i~~~l~~~ 418 (433)
..+|++|.+++..+
T Consensus 328 ~~~a~~l~~~~~~p 341 (369)
T 3d1c_A 328 AVLAHLLTQREGLP 341 (369)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHhcccCCC
Confidence 99999999887643
No 26
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=9.7e-35 Score=285.59 Aligned_cols=292 Identities=18% Similarity=0.197 Sum_probs=208.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
++|+|||||+||+++|..|++.| .+|+|||+++..+... ...+ .. +...............
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~--~~l~-------~~---~~~~~~~~~~~~~~~~----- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFAN--CALP-------YV---IGEVVEDRRYALAYTP----- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCG--GGHH-------HH---HTTSSCCGGGTBCCCH-----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCc--chhH-------HH---HcCCccchhhhhhcCH-----
Confidence 47999999999999999999988 4799999987553211 0000 00 0000000000000112
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
.++.++.+++++.+++|+.++... ..+.+.... ..+...+.||+|||||| ++|+.|++++...+.....
T Consensus 64 --~~~~~~~~i~~~~~~~V~~id~~~--~~~~~~~~~-----~~~~~~~~yd~lVIATG--s~p~~p~i~g~~~~~~~~~ 132 (437)
T 4eqs_A 64 --EKFYDRKQITVKTYHEVIAINDER--QTVSVLNRK-----TNEQFEESYDKLILSPG--ASANSLGFESDITFTLRNL 132 (437)
T ss_dssp --HHHHHHHCCEEEETEEEEEEETTT--TEEEEEETT-----TTEEEEEECSEEEECCC--EEECCCCCCCTTEECCSSH
T ss_pred --HHHHHhcCCEEEeCCeEEEEEccC--cEEEEEecc-----CCceEEEEcCEEEECCC--CccccccccCceEEeeccH
Confidence 234456789999999999998765 444343321 23346899999999999 8899888887543322111
Q ss_pred eccCCCCC--CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHH
Q 013943 192 HTSLYKSG--EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKL 269 (433)
Q Consensus 192 ~~~~~~~~--~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~ 269 (433)
..+...+. ....+++++|||+|.+|+|+|..+.+.|.+||++.+.+ ++++..+.
T Consensus 133 ~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~----------------------- 188 (437)
T 4eqs_A 133 EDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDA----------------------- 188 (437)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCG-----------------------
T ss_pred HHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccc-----------------------
Confidence 11111000 11247899999999999999999999999999999988 56554332
Q ss_pred HHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEEcCCcEecccEEE
Q 013943 270 LLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEFVNGRCENFDAII 347 (433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~vi 347 (433)
.....+.+.+++.+|+++.+ +.+++.+.+.+++|+++++|.||
T Consensus 189 -----------------------------------~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl 233 (437)
T 4eqs_A 189 -----------------------------------DMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMII 233 (437)
T ss_dssp -----------------------------------GGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEE
T ss_pred -----------------------------------hhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEE
Confidence 12222334566678888876 88999999999999999999999
Q ss_pred EccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------------cccchhhHHHHHHHHHhh
Q 013943 348 LATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------------LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 348 ~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------------~~~a~~~g~~~a~~i~~~ 414 (433)
+|+|..||+ .+++..++..+++|++.+| ++++|+.|+|||+|||+.. +..|..+|+.+|++|.+.
T Consensus 234 ~a~G~~Pn~-~~~~~~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 234 EGVGTHPNS-KFIESSNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp ECCCEEESC-GGGTTSSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred EEeceecCc-HHHHhhhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 999999998 6888888888889999999 7889999999999999852 235788999999999864
No 27
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=4.5e-33 Score=279.62 Aligned_cols=289 Identities=19% Similarity=0.239 Sum_probs=222.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
..+||+|||||++|+++|..|++.|++|+++|+ ..||.|.... .+ ..+.. ..+....++..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~--~~--------~~~~~-------~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV--DI--------ENYIS-------VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS--CB--------CCBTT-------BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc--cc--------cccCC-------CCCCCHHHHHH
Confidence 468999999999999999999999999999986 4788775421 00 00100 01246788999
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCC-CCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDAT-IRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~-~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
++.+.+++.+++++.+++|+.++.+.. ...|+|++.++ ..+.||+||+||| +++..|++||...+.+..
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g--------~~~~~d~vVlAtG--~~~~~~~ipG~~~~~~~~ 341 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG--------AVLKARSIIIATG--AKWRNMNVPGEDQYRTKG 341 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTTTTTT
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC--------CEEEcCEEEECCC--CCcCCCCCCChhhhcCce
Confidence 999999999999999999999986532 24688888765 6899999999999 677788888887766655
Q ss_pred eeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHH
Q 013943 191 RHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLL 270 (433)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 270 (433)
.+.+...+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|.+. +++.
T Consensus 342 v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~-l~~~--------------------------- 393 (521)
T 1hyu_A 342 VTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MKAD--------------------------- 393 (521)
T ss_dssp EECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS-CCSC---------------------------
T ss_pred EEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc-cCcC---------------------------
Confidence 666555444456789999999999999999999999999999988872 2110
Q ss_pred HHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhc-CCeEEecC--ceEEeCC-----eEEEcC---Cc
Q 013943 271 LVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKS-GHIRVFPG--IKRLKRY-----AVEFVN---GR 339 (433)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~~~-----~v~~~~---g~ 339 (433)
..+.+.+.+ .+|+++.+ +.++..+ ++.+.+ |+
T Consensus 394 -------------------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~ 436 (521)
T 1hyu_A 394 -------------------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGD 436 (521)
T ss_dssp -------------------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCC
T ss_pred -------------------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCc
Confidence 001122333 58888877 7777643 356643 54
Q ss_pred --EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHHHHHh
Q 013943 340 --CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 340 --~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~ 413 (433)
++++|.||+|+|+.|+. .|+.+. +..+++|++.+| +.++|+.|+|||+|||+.. +..|+.+|..+|.+|..
T Consensus 437 ~~~i~~D~vi~a~G~~pn~-~~l~~~-l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 437 IHSVALAGIFVQIGLLPNT-HWLEGA-LERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp EEEEECSEEEECCCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEECcCCCCCc-hHHhhh-hccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHH
Confidence 58999999999999998 577653 555678999999 6788999999999999964 34789999999999998
Q ss_pred hhcc
Q 013943 414 CWKA 417 (433)
Q Consensus 414 ~l~~ 417 (433)
.|.+
T Consensus 514 ~L~~ 517 (521)
T 1hyu_A 514 YLIR 517 (521)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 28
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=4.9e-33 Score=277.88 Aligned_cols=375 Identities=19% Similarity=0.182 Sum_probs=225.4
Q ss_pred CCCCccCCCCeEEECCChHHHHHHHHHHHcC--------------CCEEEEecCCCCCCcccccc-cCceeeecCC--ce
Q 013943 26 SSPRCICVPGPVIVGAGPSGLATAACLKERG--------------IPSILLERSNCIASLWQLKT-YDRLRLHLPK--QF 88 (433)
Q Consensus 26 ~~~~~~~~~dVvIIGaG~aGl~~A~~L~~~g--------------~~v~iie~~~~~gg~w~~~~-~~~~~~~~~~--~~ 88 (433)
.+++...+|||||||+||+||++|..|.+.+ ...+++|+.+.++ |+..+ +++..++.+. .+
T Consensus 32 ~~tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dl 109 (501)
T 4b63_A 32 RSTPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDL 109 (501)
T ss_dssp CCCCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSS
T ss_pred CCCCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhh
Confidence 4466678899999999999999999998753 3567888887765 76654 6665555431 11
Q ss_pred eec--CC---------------CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCC------CeEEEE
Q 013943 89 CEL--PL---------------MGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATI------RFWRVK 145 (433)
Q Consensus 89 ~~~--~~---------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~------~~~~v~ 145 (433)
..+ +. +++......|+.+.++.+|+++++++++..++++++|+++++.... +.|+|+
T Consensus 110 vtl~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~ 189 (501)
T 4b63_A 110 ATLRDPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVR 189 (501)
T ss_dssp STTTCTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEE
T ss_pred ccccCCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEE
Confidence 111 10 0112233457899999999999999998889999999999986542 359999
Q ss_pred EeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCceeeccCCCC------CCCCCCCeEEEECCCCcHHHH
Q 013943 146 TTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIRHTSLYKS------GEDFRGKRVLVVGCGNSGMEV 219 (433)
Q Consensus 146 ~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~a~e~ 219 (433)
+.++ ..++..++.++.||+||| ..|.+|.. ..+.+.++|+..+.+ ...+.+|+|+|||+|+||+|+
T Consensus 190 ~~~~---~~g~~~~~~ar~vVlatG--~~P~iP~~---~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei 261 (501)
T 4b63_A 190 SRNV---ETGEISARRTRKVVIAIG--GTAKMPSG---LPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEI 261 (501)
T ss_dssp EEET---TTCCEEEEEEEEEEECCC--CEECCCTT---SCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHH
T ss_pred EecC---CCceEEEEEeCEEEECcC--CCCCCCCC---CCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHH
Confidence 8875 134567899999999999 66776654 345678999998864 456889999999999999999
Q ss_pred HHHHhcc--CCCcEEEEecCcceecccccCCcchhhh-HHH--HhhcchHHHHHHHHHHHHHhhcc------------cc
Q 013943 220 CLDLCNH--DAMPSLVVRDTVHVLPQEMLGKSTFGLS-MWL--LKWLPMRLVDKLLLVVSWLMLGD------------TA 282 (433)
Q Consensus 220 a~~l~~~--g~~Vtl~~r~~~~~lp~~~~~~~~~~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~------------~~ 282 (433)
+..|++. +.+|+++.|++. ..|..+.......+. .+. ...++...+.++........++. ..
T Consensus 262 ~~~L~~~~~~~~v~~~~R~~~-~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y 340 (501)
T 4b63_A 262 FHDLQKRYPNSRTTLIMRDSA-MRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMY 340 (501)
T ss_dssp HHHHHHHSTTCEEEEECSSSS-CCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCceEEEEeCCCc-cccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHH
Confidence 9999875 679999999994 445544322111100 000 11133333322222111100000 00
Q ss_pred ccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecCceEEeCCeEEEcCCcEecccEEEEccCCCCCCCCcccc
Q 013943 283 RFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPGIKRLKRYAVEFVNGRCENFDAIILATGYRSNVPSWLKE 362 (433)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~ 362 (433)
...+..+.......... ...... ........+.+++...+.+++.+++.+.+|+++++|+||+||||+++.+.++..
T Consensus 341 ~~~~~~~~~~~~~~~l~-~~~~v~--~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~ 417 (501)
T 4b63_A 341 LQRVKNPDETQWQHRIL-PERKIT--RVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLS 417 (501)
T ss_dssp HHHHHCSCGGGCSSEEE-CSEEEE--EEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTG
T ss_pred hhccCCCcccccceeec-CCccee--eeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcc
Confidence 00000000000000000 000000 001111234555554555666778889999999999999999999998655544
Q ss_pred c--cccccCCCCcCCCCCCCC-------CCCCceEEeeecc-------cccccchhhHHHHHHHHHhh
Q 013943 363 S--EMFSRKDGLPRRPFPNGW-------KGESGLYSVGFTK-------RGLLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 363 ~--~l~~~~~g~~~~~~~~~~-------~~~~~iya~Gd~~-------~~~~~a~~~g~~~a~~i~~~ 414 (433)
. .+..|.+|.+.++.++.. ...++||+.|-+- +......+.+..|++.|.++
T Consensus 418 ~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~~~l~g~ 485 (501)
T 4b63_A 418 KVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQSIFGE 485 (501)
T ss_dssp GGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHH
T ss_pred hhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHHHHHhcc
Confidence 3 444556777776643322 2357899998443 22333344455677777653
No 29
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=9.7e-33 Score=273.12 Aligned_cols=286 Identities=15% Similarity=0.145 Sum_probs=200.8
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
+||+|||||++|+++|..|++. +.+|+|||+++.+|..... . ...... ......++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~--~---~~~~~~---------------~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG--L---SAYFNH---------------TINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc--c---hhhhcC---------------CCCCHHHhhc
Confidence 6899999999999999999998 8999999999876521100 0 000000 0001111111
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
...+.+.+.+++++++++|+.++... +.|.+.... +...+.||+||+||| ++|..|+++|.+.. .+.
T Consensus 63 ~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~v~~~~-------~~~~~~~d~lviAtG--~~p~~p~i~g~~~~--~v~ 129 (452)
T 3oc4_A 63 ITEEELRRQKIQLLLNREVVAMDVEN--QLIAWTRKE-------EQQWYSYDKLILATG--ASQFSTQIRGSQTE--KLL 129 (452)
T ss_dssp CCHHHHHHTTEEEECSCEEEEEETTT--TEEEEEETT-------EEEEEECSEEEECCC--CCBCCCCCBTTTCT--TEE
T ss_pred CCHHHHHHCCCEEEECCEEEEEECCC--CEEEEEecC-------ceEEEEcCEEEECCC--cccCCCCCCCCCCC--CEE
Confidence 12344566788888999999998766 566554221 137899999999999 78999999887641 233
Q ss_pred eccCCCCCC-----CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHH
Q 013943 192 HTSLYKSGE-----DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLV 266 (433)
Q Consensus 192 ~~~~~~~~~-----~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~ 266 (433)
+...+.+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++... ++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~----------------d~~-- 190 (452)
T 3oc4_A 130 KYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYF----------------DKE-- 190 (452)
T ss_dssp EGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTC----------------CHH--
T ss_pred EeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccC----------------CHH--
Confidence 333222211 2357899999999999999999999999999999988 4544311 011
Q ss_pred HHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEe--CCe--EEEcCCcE
Q 013943 267 DKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLK--RYA--VEFVNGRC 340 (433)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~--~~~--v~~~~g~~ 340 (433)
....+.+.+++.+|+++.+ +.++. +++ +.++++ +
T Consensus 191 ---------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~ 230 (452)
T 3oc4_A 191 ---------------------------------------MVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-E 230 (452)
T ss_dssp ---------------------------------------HHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-E
T ss_pred ---------------------------------------HHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-E
Confidence 1111234466678998876 77776 333 555556 8
Q ss_pred ecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------------cccchhhHHHH
Q 013943 341 ENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------------LLGVAMDAKRI 407 (433)
Q Consensus 341 ~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------------~~~a~~~g~~~ 407 (433)
+++|.||+|+|+.|+. .+++.. +..+++|++.+| +.++|+.|+|||+|||+.. +..|..+|+.+
T Consensus 231 i~aD~Vv~A~G~~p~~-~~l~~~-~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~a 307 (452)
T 3oc4_A 231 ISCDSGIFALNLHPQL-AYLDKK-IQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVV 307 (452)
T ss_dssp EEESEEEECSCCBCCC-SSCCTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHH
T ss_pred EEeCEEEECcCCCCCh-HHHHhh-hccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHH
Confidence 9999999999999998 566554 555678999999 6888999999999999853 23689999999
Q ss_pred HHHHHhh
Q 013943 408 AQDIESC 414 (433)
Q Consensus 408 a~~i~~~ 414 (433)
|++|.+.
T Consensus 308 a~~i~g~ 314 (452)
T 3oc4_A 308 ANNLEEK 314 (452)
T ss_dssp TTSSSSC
T ss_pred HHHhcCC
Confidence 9998764
No 30
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.3e-33 Score=286.65 Aligned_cols=293 Identities=19% Similarity=0.224 Sum_probs=214.7
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHH
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQ 108 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
+.++||+|||||++|+++|..|++. +.+|+|||+++.++ |.....+ .. +... .......
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~~~lp---~~-------~~g~-------~~~~~~~ 94 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FANCGLP---YY-------IGGV-------ITERQKL 94 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCGGGHH---HH-------HTTS-------SCCGGGG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccCCCCc---hh-------hcCc-------CCChHHh
Confidence 4578999999999999999999998 88999999998654 1110000 00 0000 0012223
Q ss_pred HHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCC
Q 013943 109 FVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGG 188 (433)
Q Consensus 109 ~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~ 188 (433)
+..++.++.++.+++++++++|+.++.+. +.+.+...+ .++...+.||+||+||| ++|..|+++|.....+
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v~v~~~~-----~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~~~~ 165 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE--KTITIKNVT-----TNETYNEAYDVLILSPG--AKPIVPSIPGIEEAKA 165 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT--TEEEEEETT-----TCCEEEEECSEEEECCC--EEECCCCCTTTTTCTT
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEeecC-----CCCEEEEeCCEEEECCC--CCCCCCCCCCcccCCC
Confidence 44566777788899999999999998765 565554321 12235889999999999 8899998988733222
Q ss_pred ceeeccCCCCCC-------CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhc
Q 013943 189 DIRHTSLYKSGE-------DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWL 261 (433)
Q Consensus 189 ~~~~~~~~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l 261 (433)
+.......+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 166 -v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~--------------- 228 (588)
T 3ics_A 166 -LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDY--------------- 228 (588)
T ss_dssp -EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH---------------
T ss_pred -eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCH---------------
Confidence 23222221111 1357899999999999999999999999999999888 55554221
Q ss_pred chHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--CeEEEcC
Q 013943 262 PMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--YAVEFVN 337 (433)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v~~~~ 337 (433)
. ....+.+.+++.+|+++.+ |.++.. +++.+.+
T Consensus 229 --~-----------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~ 265 (588)
T 3ics_A 229 --E-----------------------------------------MAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKS 265 (588)
T ss_dssp --H-----------------------------------------HHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETT
T ss_pred --H-----------------------------------------HHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECC
Confidence 0 1111224455678888876 778876 5789999
Q ss_pred CcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc-------------ccccchhhH
Q 013943 338 GRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR-------------GLLGVAMDA 404 (433)
Q Consensus 338 g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-------------~~~~a~~~g 404 (433)
|+++++|.||+|+|+.|+. .+++..++..+++|++.+| +.++|+.|+|||+|||+. .+..|..+|
T Consensus 266 g~~i~~D~Vi~a~G~~p~~-~~l~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g 343 (588)
T 3ics_A 266 GSVIQTDMLILAIGVQPES-SLAKGAGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQG 343 (588)
T ss_dssp SCEEECSEEEECSCEEECC-HHHHHTTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHH
T ss_pred CCEEEcCEEEEccCCCCCh-HHHHhcCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHH
Confidence 9999999999999999998 5777778877788999999 788899999999999983 123588999
Q ss_pred HHHHHHHHh
Q 013943 405 KRIAQDIES 413 (433)
Q Consensus 405 ~~~a~~i~~ 413 (433)
+.+|++|.+
T Consensus 344 ~~aa~~i~g 352 (588)
T 3ics_A 344 RMLADIIHG 352 (588)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999986
No 31
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=5.6e-35 Score=282.30 Aligned_cols=273 Identities=14% Similarity=0.177 Sum_probs=198.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
..++|+|||||+||+++|..|...+.+|+|||+++.++. ..... +.. + .+....+++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y--~~~~l-------~~~---l---------~g~~~~~~l~~ 66 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY--YRPRL-------NEI---I---------AKNKSIDDILI 66 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB--CGGGH-------HHH---H---------HSCCCGGGTBS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc--ccChh-------hHH---H---------cCCCCHHHccC
Confidence 457899999999999999999777899999999986541 01000 000 0 00111222233
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
+..+++++.+++++++++|++++.+. +. |++.++ .++.||+||+||| ++|+.|++||.+ .+.
T Consensus 67 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~--v~~~~g--------~~~~yd~lvlAtG--~~p~~p~i~G~~----~v~ 128 (385)
T 3klj_A 67 KKNDWYEKNNIKVITSEFATSIDPNN--KL--VTLKSG--------EKIKYEKLIIASG--SIANKIKVPHAD----EIF 128 (385)
T ss_dssp SCHHHHHHTTCEEECSCCEEEEETTT--TE--EEETTS--------CEEECSEEEECCC--EEECCCCCTTCS----CEE
T ss_pred CCHHHHHHCCCEEEeCCEEEEEECCC--CE--EEECCC--------CEEECCEEEEecC--CCcCCCCCCCCC----CeE
Confidence 33455567799999999999998765 33 777776 6899999999999 889999998875 122
Q ss_pred eccCCCCCCCC-----CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHH
Q 013943 192 HTSLYKSGEDF-----RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLV 266 (433)
Q Consensus 192 ~~~~~~~~~~~-----~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~ 266 (433)
+.....+.... .+++++|||+|.+|+|+|..|.+.|.+||++.+.+ +++++... +.
T Consensus 129 ~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~----------------~~-- 189 (385)
T 3klj_A 129 SLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLD----------------RD-- 189 (385)
T ss_dssp CCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSC----------------HH--
T ss_pred EeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcC----------------HH--
Confidence 22222111111 26899999999999999999999999999999998 55553211 11
Q ss_pred HHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEEcCCcEeccc
Q 013943 267 DKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEFVNGRCENFD 344 (433)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D 344 (433)
....+.+.+++.+|+++.+ +.++ |+++++|
T Consensus 190 ---------------------------------------~~~~~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D 221 (385)
T 3klj_A 190 ---------------------------------------GGLFLKDKLDRLGIKIYTNSNFEEM---------GDLIRSS 221 (385)
T ss_dssp ---------------------------------------HHHHHHHHHHTTTCEEECSCCGGGC---------HHHHHHS
T ss_pred ---------------------------------------HHHHHHHHHHhCCCEEEeCCEEEEc---------CeEEecC
Confidence 1111124455678888765 5444 6779999
Q ss_pred EEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------cccchhhHHHHHHHHHhh
Q 013943 345 AIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 345 ~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------~~~a~~~g~~~a~~i~~~ 414 (433)
.||+|+|+.|+. .++++.++.. ++| +.+| +.++|+.|+|||+|||+.. +..|..+|+.+|.+|.+.
T Consensus 222 ~vv~a~G~~p~~-~~~~~~gl~~-~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 222 CVITAVGVKPNL-DFIKDTEIAS-KRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp EEEECCCEEECC-GGGTTSCCCB-SSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred eEEECcCcccCh-hhhhhcCCCc-CCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 999999999998 6888888876 456 7788 6888999999999999852 346899999999999874
No 32
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.2e-33 Score=287.74 Aligned_cols=291 Identities=16% Similarity=0.181 Sum_probs=206.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
|+||+|||||++|+++|..|++. +.+|++||+++.++. .....+ .. +... .......+.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~--~~~~l~---~~-------~~~~-------~~~~~~~~~ 61 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF--ANCGLP---YH-------ISGE-------IAQRSALVL 61 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB--CGGGHH---HH-------HTSS-------SCCGGGGBC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc--cccCch---HH-------hcCC-------cCChHHhhc
Confidence 57899999999999999999998 789999999986641 110000 00 0000 001222334
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
.++.++.++.+++++++++|++++... +.+++.... .++...+.||+||+||| ++|..|++||.+... +
T Consensus 62 ~~~~~~~~~~~i~~~~~~~V~~id~~~--~~v~~~~~~-----~g~~~~~~~d~lviAtG--~~p~~p~ipG~~~~~--v 130 (565)
T 3ntd_A 62 QTPESFKARFNVEVRVKHEVVAIDRAA--KLVTVRRLL-----DGSEYQESYDTLLLSPG--AAPIVPPIPGVDNPL--T 130 (565)
T ss_dssp CCHHHHHHHHCCEEETTEEEEEEETTT--TEEEEEETT-----TCCEEEEECSEEEECCC--EEECCCCCTTCCSTT--E
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECCC--CEEEEEecC-----CCCeEEEECCEEEECCC--CCCCCCCCCCCCCCC--E
Confidence 455666667899999999999998765 565554311 12235899999999999 789999999875422 2
Q ss_pred eeccCCCC--C-----CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 191 RHTSLYKS--G-----EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 191 ~~~~~~~~--~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
.......+ . ....+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ +++|..+.
T Consensus 131 ~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----------------- 192 (565)
T 3ntd_A 131 HSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDR----------------- 192 (565)
T ss_dssp ECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCH-----------------
T ss_pred EEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCH-----------------
Confidence 22211111 0 11357899999999999999999999999999999998 55553221
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC-----------
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR----------- 330 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~----------- 330 (433)
...+ .+.+.+++.+|+++.+ +.++..
T Consensus 193 ~~~~-----------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~ 231 (565)
T 3ntd_A 193 EMAG-----------------------------------------FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAA 231 (565)
T ss_dssp HHHH-----------------------------------------HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGG
T ss_pred HHHH-----------------------------------------HHHHHHHHCCCEEEeCCeEEEEecccccccccccc
Confidence 1111 1123344567777665 555543
Q ss_pred ----------C--eEEEcCCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc---
Q 013943 331 ----------Y--AVEFVNGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR--- 395 (433)
Q Consensus 331 ----------~--~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~--- 395 (433)
+ .+.+.+|+++++|.||+|+|+.|+. .++++.++..+++|++.+| +.++|+.|+|||+|||+.
T Consensus 232 ~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~-~l~~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~ 309 (565)
T 3ntd_A 232 GEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET-QLARDAGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVEEQD 309 (565)
T ss_dssp TCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC-HHHHHHTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBCEEB
T ss_pred ccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch-HHHHhCCcccCCCCCEEEC-CCcccCCCCEEEeeeeEeecc
Confidence 2 2566788899999999999999998 5777778877788999999 678899999999999983
Q ss_pred ----------ccccchhhHHHHHHHHHhh
Q 013943 396 ----------GLLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 396 ----------~~~~a~~~g~~~a~~i~~~ 414 (433)
.+..|..+|+.+|++|.+.
T Consensus 310 ~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 310 FVTGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp TTTCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred ccCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 1235889999999999864
No 33
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=2.5e-33 Score=278.95 Aligned_cols=298 Identities=15% Similarity=0.160 Sum_probs=195.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
++||+|||||++|+++|..|++. +.+|+|||+++.++ |.....+. .... .....+. .++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~---~~~g------~~~~~~~--~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY---YVSG------EVSNIES--LQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch---hhcC------CCCchHH--hccccchhc
Confidence 47899999999999999999998 89999999998653 11100000 0000 0000000 001112245
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
.+..++.++.+++++++++|+.++... ..+.+.... .++...+.||+||+||| ++|..|+++|.+. .+ +
T Consensus 70 ~~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~~~~~~-----~g~~~~~~~d~lviAtG--~~p~~p~i~G~~~-~~-v 138 (472)
T 3iwa_A 70 RDPEFFRINKDVEALVETRAHAIDRAA--HTVEIENLR-----TGERRTLKYDKLVLALG--SKANRPPVEGMDL-AG-V 138 (472)
T ss_dssp -----------CEEECSEEEEEEETTT--TEEEEEETT-----TCCEEEEECSEEEECCC--EEECCCSCTTTTS-BT-E
T ss_pred cCHHHHhhhcCcEEEECCEEEEEECCC--CEEEEeecC-----CCCEEEEECCEEEEeCC--CCcCCCCCCCCCC-CC-E
Confidence 556666667789999999999998765 565554411 11235899999999999 7899998888752 22 2
Q ss_pred eeccCCCCC-------CCCCCCeEEEECCCCcHHHHHHHHhcc-CCCcEEEEecCcceecccccCCcchhhhHHHHhhcc
Q 013943 191 RHTSLYKSG-------EDFRGKRVLVVGCGNSGMEVCLDLCNH-DAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLP 262 (433)
Q Consensus 191 ~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~-g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~ 262 (433)
.+.....+. ....+++++|||+|.+|+|+|..|.+. |.+|+++.+.+ +++|... .
T Consensus 139 ~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~----------------~ 201 (472)
T 3iwa_A 139 TPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFT----------------S 201 (472)
T ss_dssp EECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTS----------------C
T ss_pred EEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-ccccccc----------------C
Confidence 222211110 113478999999999999999999999 99999999988 5544211 0
Q ss_pred hHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC-C-e--EEEc
Q 013943 263 MRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR-Y-A--VEFV 336 (433)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~-~-~--v~~~ 336 (433)
+. ....+.+.+++.+|+++.+ |.++.. + . +.+.
T Consensus 202 ~~-----------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 240 (472)
T 3iwa_A 202 KS-----------------------------------------LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVIT 240 (472)
T ss_dssp HH-----------------------------------------HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE
T ss_pred HH-----------------------------------------HHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEe
Confidence 11 1111224455678888876 777764 2 2 6778
Q ss_pred CCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc-------------ccccchhh
Q 013943 337 NGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR-------------GLLGVAMD 403 (433)
Q Consensus 337 ~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-------------~~~~a~~~ 403 (433)
+|+++++|.||+|+|+.|+. .++++.++..+++|++.+| +.++++.|+|||+|||+. ....|..+
T Consensus 241 ~g~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~ 318 (472)
T 3iwa_A 241 DKRTLDADLVILAAGVSPNT-QLARDAGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQ 318 (472)
T ss_dssp SSCEEECSEEEECSCEEECC-HHHHHHTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHH
T ss_pred CCCEEEcCEEEECCCCCcCH-HHHHhCCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHHHHHH
Confidence 89999999999999999998 5777778877788999999 678899999999999983 23368999
Q ss_pred HHHHHHHHHhh
Q 013943 404 AKRIAQDIESC 414 (433)
Q Consensus 404 g~~~a~~i~~~ 414 (433)
|+.+|++|.+.
T Consensus 319 g~~aa~~i~g~ 329 (472)
T 3iwa_A 319 GRVIGTNLADG 329 (472)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 99999999864
No 34
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.1e-33 Score=275.64 Aligned_cols=284 Identities=19% Similarity=0.251 Sum_probs=197.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
++||+|||||++|+++|..|++. +.+|++||+++.++..... ++. ...+.....++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~----------------~p~-----~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG----------------IPY-----VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC----------------Ccc-----ccCCCCCHHHhh
Confidence 58999999999999999999998 7899999999855421100 000 011111223333
Q ss_pred HHH-HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCc
Q 013943 111 DYL-EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGD 189 (433)
Q Consensus 111 ~~l-~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~ 189 (433)
.+. .++.++.+++++++++|+.++. ..+++.+.++ ...+.||+||+||| ++|..|+++|.+.. +
T Consensus 62 ~~~~~~~~~~~gi~v~~~~~v~~i~~----~~~~v~~~~g-------~~~~~~d~lviAtG--~~p~~p~i~G~~~~-~- 126 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDLHLNAEVIEVDT----GYVRVRENGG-------EKSYEWDYLVFANG--ASPQVPAIEGVNLK-G- 126 (449)
T ss_dssp ----CTHHHHTTCEEETTCEEEEECS----SEEEEECSSS-------EEEEECSEEEECCC--EEECCCSCBTTTST-T-
T ss_pred hcCHHHHHHhcCcEEEecCEEEEEec----CCCEEEECCc-------eEEEEcCEEEECCC--CCCCCCCCCCCCCC-C-
Confidence 333 2344678999999999988864 3355655543 35899999999999 88898988887531 1
Q ss_pred eeeccCCCC-------CCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecc-cccCCcchhhhHHHHhhc
Q 013943 190 IRHTSLYKS-------GEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQ-EMLGKSTFGLSMWLLKWL 261 (433)
Q Consensus 190 ~~~~~~~~~-------~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~-~~~~~~~~~~~~~~~~~l 261 (433)
++......+ ...+.+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ ++++. .+.
T Consensus 127 v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~--------------- 190 (449)
T 3kd9_A 127 VFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDK--------------- 190 (449)
T ss_dssp EECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCH---------------
T ss_pred EEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCH---------------
Confidence 111111100 112367899999999999999999999999999999988 44443 111
Q ss_pred chHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe---EEEc
Q 013943 262 PMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA---VEFV 336 (433)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~---v~~~ 336 (433)
... ..+.+.+++. |+++.+ +.++..++ ..+.
T Consensus 191 --~~~-----------------------------------------~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~ 226 (449)
T 3kd9_A 191 --EVT-----------------------------------------DILEEKLKKH-VNLRLQEITMKIEGEERVEKVVT 226 (449)
T ss_dssp --HHH-----------------------------------------HHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEE
T ss_pred --HHH-----------------------------------------HHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEe
Confidence 111 1112334445 777665 66676543 3456
Q ss_pred CCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc-------------ccccchhh
Q 013943 337 NGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR-------------GLLGVAMD 403 (433)
Q Consensus 337 ~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-------------~~~~a~~~ 403 (433)
+++++++|.||+|+|+.|+. .+++..++..+++|++.+| +.++|+.|+|||+|||+. ....|..+
T Consensus 227 ~g~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~ 304 (449)
T 3kd9_A 227 DAGEYKAELVILATGIKPNI-ELAKQLGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKM 304 (449)
T ss_dssp TTEEEECSEEEECSCEEECC-HHHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHH
T ss_pred CCCEEECCEEEEeeCCccCH-HHHHhCCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHH
Confidence 78889999999999999998 6777778877788999999 688899999999999983 12368999
Q ss_pred HHHHHHHHHhh
Q 013943 404 AKRIAQDIESC 414 (433)
Q Consensus 404 g~~~a~~i~~~ 414 (433)
|+.+|++|.+.
T Consensus 305 g~~aa~~i~g~ 315 (449)
T 3kd9_A 305 GYVAGSNIAGK 315 (449)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 99999999864
No 35
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7.6e-33 Score=276.48 Aligned_cols=289 Identities=19% Similarity=0.215 Sum_probs=201.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC---CCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG---IPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g---~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
.+||+|||||++|+++|..|++.| .+|+|||+++.++..+.. +...... ....+ +++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~------~~~~~---------~~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGE------QIAGP---------EGL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTT------SSSCS---------GGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcC------ccCCH---------HHh
Confidence 489999999999999999999988 999999998865432211 0000000 00000 001
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCC-----
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSD----- 184 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~----- 184 (433)
.....+.+++.+++++.+++|+.++.++ +.+++.. ++ +..++.||+||+||| ++|..|++||.+
T Consensus 95 ~~~~~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~-~g------~~~~~~~d~lviAtG--~~p~~p~i~G~~~~~~~ 163 (490)
T 2bc0_A 95 FYSDKEELESLGAKVYMESPVQSIDYDA--KTVTALV-DG------KNHVETYDKLIFATG--SQPILPPIKGAEIKEGS 163 (490)
T ss_dssp BSCCHHHHHHTTCEEETTCCEEEEETTT--TEEEEEE-TT------EEEEEECSEEEECCC--EEECCCSCBTCCBCTTC
T ss_pred hhcCHHHHHhCCCEEEeCCEEEEEECCC--CEEEEEe-CC------cEEEEECCEEEECCC--CCcCCCCCCCccccccc
Confidence 1111334456788988999999998765 5555541 21 025799999999999 888899898876
Q ss_pred -CCC---CceeeccCCCCC-------CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhh
Q 013943 185 -EFG---GDIRHTSLYKSG-------EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGL 253 (433)
Q Consensus 185 -~~~---~~~~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~ 253 (433)
.|. ..+++...+.+. ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ ++++...
T Consensus 164 ~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~-------- 234 (490)
T 2bc0_A 164 LEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYY-------- 234 (490)
T ss_dssp TTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTS--------
T ss_pred cccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHH--------
Confidence 221 123332221110 11468899999999999999999999999999999988 4444210
Q ss_pred hHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC
Q 013943 254 SMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY 331 (433)
Q Consensus 254 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~ 331 (433)
++. ....+.+.+++.+|+++.+ +.++..+
T Consensus 235 --------~~~-----------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~ 265 (490)
T 2bc0_A 235 --------DRD-----------------------------------------LTDLMAKNMEEHGIQLAFGETVKEVAGN 265 (490)
T ss_dssp --------CHH-----------------------------------------HHHHHHHHHHTTTCEEEETCCEEEEECS
T ss_pred --------HHH-----------------------------------------HHHHHHHHHHhCCeEEEeCCEEEEEEcC
Confidence 111 1111224466678888876 7777654
Q ss_pred e----EEEcCCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-----------
Q 013943 332 A----VEFVNGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----------- 396 (433)
Q Consensus 332 ~----v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----------- 396 (433)
+ +.+ +++++++|.||+|+|+.|+. .++++. +..+++|++.+| ++++|+.|+|||+|||+..
T Consensus 266 ~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~-~ll~~~-l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~ 341 (490)
T 2bc0_A 266 GKVEKIIT-DKNEYDVDMVILAVGFRPNT-TLGNGK-IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNYI 341 (490)
T ss_dssp SSCCEEEE-SSCEEECSEEEECCCEEECC-GGGTTC-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEECC
T ss_pred CcEEEEEE-CCcEEECCEEEECCCCCcCh-HHHHhh-hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceeec
Confidence 3 444 77889999999999999998 577666 655678999999 6788999999999999852
Q ss_pred --cccchhhHHHHHHHHHhh
Q 013943 397 --LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 --~~~a~~~g~~~a~~i~~~ 414 (433)
+..|..+|+.+|++|.+.
T Consensus 342 ~~~~~A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 342 ALASNAVRTGIVAAHNACGT 361 (490)
T ss_dssp CCHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHhcCC
Confidence 336899999999999863
No 36
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.5e-33 Score=276.09 Aligned_cols=285 Identities=19% Similarity=0.177 Sum_probs=203.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCC--EEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIP--SILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~--v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
.++||+|||||++|+++|..|++.|++ |+++|+++.++.. .. . .++. ...+.....++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~--~~-----~--l~~~-----------~~~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE--RP-----P--LSKE-----------YLAREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC--SG-----G--GGTT-----------TTTTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC--cc-----c--CCHH-----------HHcCCCCHHHh
Confidence 468999999999999999999999986 9999998855311 00 0 0000 00000111122
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCc
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGD 189 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~ 189 (433)
..+..+++.+.+++++.+++|+.++... . ++.+.++ ..+.||+||+||| ++|..|+++|.+.. +
T Consensus 68 ~~~~~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~-~- 131 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEMKLGAEVVSLDPAA--H--TVKLGDG--------SAIEYGKLIWATG--GDPRRLSCVGADLA-G- 131 (415)
T ss_dssp BSSCHHHHHHTTEEEEETCCEEEEETTT--T--EEEETTS--------CEEEEEEEEECCC--EECCCCBTTSSCCB-T-
T ss_pred ccCCHHHHHHCCcEEEeCCEEEEEECCC--C--EEEECCC--------CEEEeeEEEEccC--CccCCCCCCCcccc-C-
Confidence 2223445566789999999999998654 3 3677665 6899999999999 88998888886531 1
Q ss_pred eeeccCCCC-----CCCCC-CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 190 IRHTSLYKS-----GEDFR-GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 190 ~~~~~~~~~-----~~~~~-~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
+.......+ ..... +++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++++.. ++
T Consensus 132 v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~----------------~~ 194 (415)
T 3lxd_A 132 VHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVA----------------GE 194 (415)
T ss_dssp EECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTS----------------CH
T ss_pred EEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhc----------------CH
Confidence 111111110 01113 7899999999999999999999999999999988 4443211 11
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-----eEEEc
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-----AVEFV 336 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~ 336 (433)
. ....+.+.+++.+|+++.+ +.++..+ ++.+.
T Consensus 195 ~-----------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~ 233 (415)
T 3lxd_A 195 A-----------------------------------------LSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQ 233 (415)
T ss_dssp H-----------------------------------------HHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEES
T ss_pred H-----------------------------------------HHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeC
Confidence 1 1111224456678888876 7777643 47888
Q ss_pred CCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccccc--------------ccchh
Q 013943 337 NGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL--------------LGVAM 402 (433)
Q Consensus 337 ~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~--------------~~a~~ 402 (433)
+|+++++|.||+|+|+.|+. .++++.++.. ++| +.+| +.++|+.|+|||+|||+... ..|..
T Consensus 234 dG~~i~aD~Vv~a~G~~p~~-~l~~~~gl~~-~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~ 309 (415)
T 3lxd_A 234 DGSVIPADIVIVGIGIVPCV-GALISAGASG-GNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNAND 309 (415)
T ss_dssp SSCEEECSEEEECSCCEESC-HHHHHTTCCC-SSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHH
T ss_pred CCCEEEcCEEEECCCCccCh-HHHHhCCCCc-CCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHH
Confidence 99999999999999999998 6787778876 356 7888 67889999999999998532 35889
Q ss_pred hHHHHHHHHHhh
Q 013943 403 DAKRIAQDIESC 414 (433)
Q Consensus 403 ~g~~~a~~i~~~ 414 (433)
+|+.+|++|.+.
T Consensus 310 qg~~aa~~i~g~ 321 (415)
T 3lxd_A 310 MATAAAKDICGA 321 (415)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhcCC
Confidence 999999999875
No 37
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=4.3e-32 Score=272.91 Aligned_cols=305 Identities=14% Similarity=0.142 Sum_probs=214.2
Q ss_pred CccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCc----eeecCCCC-CCCCCCC
Q 013943 29 RCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FCELPLMG-FPSEFPT 102 (433)
Q Consensus 29 ~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~-~~~~~~~ 102 (433)
.+...+||+|||||++|+++|..|++.|++|+|||++..+||.|... +.+...+..... +.....+. ++.....
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 118 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEK 118 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhh
Confidence 34467999999999999999999999999999999998889877542 111100000000 00001111 2222222
Q ss_pred CCCHHHHHHHHH-------HHH-----HHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccC
Q 013943 103 YPSKQQFVDYLE-------AYA-----KRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 103 ~~~~~~~~~~l~-------~~~-----~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG 170 (433)
+++..++.+++. .++ .+.++++++..+++.++. .. +.+. + ..+.||+||+|||
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~----~~--v~~~-g--------~~~~~d~lViATG 183 (523)
T 1mo9_A 119 VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN----HT--VEAA-G--------KVFKAKNLILAVG 183 (523)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET----TE--EEET-T--------EEEEBSCEEECCC
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC----CE--EEEC-C--------EEEEeCEEEECCC
Confidence 344777777664 334 566788775667777652 23 4443 3 6799999999999
Q ss_pred CCCCCccCCccCCCCCCCceeeccCCC-CCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCc
Q 013943 171 ENAEAVVPEIEGSDEFGGDIRHTSLYK-SGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKS 249 (433)
Q Consensus 171 ~~~~p~~p~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~ 249 (433)
++|..|+++|.+.. .+++..... ......+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 184 --s~p~~p~i~G~~~~--~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~--- 255 (523)
T 1mo9_A 184 --AGPGTLDVPGVNAK--GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIKDN--- 255 (523)
T ss_dssp --EECCCCCSTTTTSB--TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCCSH---
T ss_pred --CCCCCCCCCCcccC--cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccccH---
Confidence 88999988887541 133433333 2222334899999999999999999999999999999988 45543211
Q ss_pred chhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceE
Q 013943 250 TFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKR 327 (433)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~ 327 (433)
.. ...+.+.+++.+|+++.+ |.+
T Consensus 256 --------------~~-----------------------------------------~~~l~~~l~~~GV~i~~~~~V~~ 280 (523)
T 1mo9_A 256 --------------ET-----------------------------------------RAYVLDRMKEQGMEIISGSNVTR 280 (523)
T ss_dssp --------------HH-----------------------------------------HHHHHHHHHHTTCEEESSCEEEE
T ss_pred --------------HH-----------------------------------------HHHHHHHHHhCCcEEEECCEEEE
Confidence 11 111124455678888876 777
Q ss_pred EeC--Ce------EEEcCCc-EecccEEEEccCCCCCCCC-ccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-
Q 013943 328 LKR--YA------VEFVNGR-CENFDAIILATGYRSNVPS-WLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG- 396 (433)
Q Consensus 328 ~~~--~~------v~~~~g~-~~~~D~vi~atG~~~~~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~- 396 (433)
+.. ++ +.+.+|+ ++++|.||+|+|+.|+. . ++++.++..+++|++.+| ++++|+.|+|||+|||+..
T Consensus 281 i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~-~~~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~ 358 (523)
T 1mo9_A 281 IEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS-AELAKILGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGP 358 (523)
T ss_dssp EEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC-HHHHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSS
T ss_pred EEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC-ccCHHHcCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCc
Confidence 753 33 5667787 89999999999999998 5 677778877778999999 6788999999999999974
Q ss_pred --cccchhhHHHHHHHHHh
Q 013943 397 --LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 397 --~~~a~~~g~~~a~~i~~ 413 (433)
...|..+|+.+|.+|.+
T Consensus 359 ~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 359 MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp CSHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHcC
Confidence 34689999999999986
No 38
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.6e-34 Score=275.28 Aligned_cols=275 Identities=18% Similarity=0.200 Sum_probs=198.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
.||+|||||+||+++|..|++.| +|+|+|+++..+ |.....+. . +. +....+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~l~~-------~---~~---------g~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPMLSH-------Y---IA---------GFIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTTHHH-------H---HT---------TSSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccchhHH-------H---Hh---------CCCCHHHhccCC
Confidence 48999999999999999999999 999999987542 11110000 0 00 001111121222
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCceeec
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIRHT 193 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~~~ 193 (433)
.+++++.+++++.+++|+.++... ++|+ .++ .++.||+||+||| ++|+.|++||.+ .+++.
T Consensus 67 ~~~~~~~~v~~~~g~~v~~id~~~----~~V~-~~g--------~~~~~d~lViATG--s~p~~p~i~G~~----~v~~~ 127 (367)
T 1xhc_A 67 LDWYRKRGIEIRLAEEAKLIDRGR----KVVI-TEK--------GEVPYDTLVLATG--ARAREPQIKGKE----YLLTL 127 (367)
T ss_dssp HHHHHHHTEEEECSCCEEEEETTT----TEEE-ESS--------CEEECSEEEECCC--EEECCCCSBTGG----GEECC
T ss_pred HHHHHhCCcEEEECCEEEEEECCC----CEEE-ECC--------cEEECCEEEECCC--CCCCCCCCCCcC----CEEEE
Confidence 344556789999998899887643 3355 444 5799999999999 889988888832 23332
Q ss_pred cCCCCCCCC-----CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHH
Q 013943 194 SLYKSGEDF-----RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDK 268 (433)
Q Consensus 194 ~~~~~~~~~-----~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (433)
....+.... .+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++| .+ +..
T Consensus 128 ~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~-----------------~~~--- 185 (367)
T 1xhc_A 128 RTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LD-----------------EEL--- 185 (367)
T ss_dssp CSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CC-----------------HHH---
T ss_pred cCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CC-----------------HHH---
Confidence 222211111 35899999999999999999999999999999887 4544 11 011
Q ss_pred HHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEEcCCcEecccEE
Q 013943 269 LLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEFVNGRCENFDAI 346 (433)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~v 346 (433)
...+.+.+++.+|+++.+ +.+++.+++.+++|+ +++|.|
T Consensus 186 --------------------------------------~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~v 226 (367)
T 1xhc_A 186 --------------------------------------SNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVK 226 (367)
T ss_dssp --------------------------------------HHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCE
T ss_pred --------------------------------------HHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEE
Confidence 111124466678999886 888887789998888 999999
Q ss_pred EEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc-------ccccchhhHHHHHHHHHhh
Q 013943 347 ILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR-------GLLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 347 i~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-------~~~~a~~~g~~~a~~i~~~ 414 (433)
|+|+|+.|+. .++++.++.. ++| +.+| +.++|+.|+|||+|||+. .+..|..+|+.+|++|.+.
T Consensus 227 i~a~G~~p~~-~ll~~~gl~~-~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 227 ICAIGIVPNV-DLARRSGIHT-GRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp EEECCEEECC-HHHHHTTCCB-SSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred EECcCCCcCH-HHHHhCCCCC-CCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 9999999998 5777778866 455 7788 678899999999999973 2346899999999999864
No 39
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.98 E-value=1.4e-32 Score=274.91 Aligned_cols=311 Identities=17% Similarity=0.151 Sum_probs=201.6
Q ss_pred CCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCceee-----cCCCCCCCCCC
Q 013943 28 PRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQFCE-----LPLMGFPSEFP 101 (433)
Q Consensus 28 ~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 101 (433)
.+++..|||+|||||++|+++|..|++.|++|+|||+++.+||.|... +++...+..+..... +..+.......
T Consensus 20 ~~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 99 (491)
T 3urh_A 20 FQSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP 99 (491)
T ss_dssp ------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC
T ss_pred hhhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC
Confidence 344556999999999999999999999999999999999999976542 121111100000000 00000000000
Q ss_pred CCCCHHH-----------HHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccC
Q 013943 102 TYPSKQQ-----------FVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 102 ~~~~~~~-----------~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG 170 (433)
...... +...+...+++.++++..+... . . +...+.|...+ ++...+.||+||+|||
T Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~--~--~~~~~~v~~~~------g~~~~~~~d~lViATG 167 (491)
T 3urh_A 100 -KLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK-V--L--GQGKVSVTNEK------GEEQVLEAKNVVIATG 167 (491)
T ss_dssp -EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-E--C--SSSEEEEECTT------SCEEEEECSEEEECCC
T ss_pred -ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-E--e--cCCEEEEEeCC------CceEEEEeCEEEEccC
Confidence 011111 2223334455667776555422 1 1 22455565443 2246899999999999
Q ss_pred CCCCCccCCccCCCC-CCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCc
Q 013943 171 ENAEAVVPEIEGSDE-FGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKS 249 (433)
Q Consensus 171 ~~~~p~~p~~~g~~~-~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~ 249 (433)
++| +.+||... +.+..++++.........+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++..+.
T Consensus 168 --s~p--~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~--- 239 (491)
T 3urh_A 168 --SDV--AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG--- 239 (491)
T ss_dssp --EEC--CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH---
T ss_pred --CCC--CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH---
Confidence 554 34566542 2333445544444445568999999999999999999999999999999888 55553221
Q ss_pred chhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceE
Q 013943 250 TFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKR 327 (433)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~ 327 (433)
. ....+.+.+++.+|+++.+ +.+
T Consensus 240 --------------~-----------------------------------------~~~~l~~~l~~~gV~v~~~~~v~~ 264 (491)
T 3urh_A 240 --------------E-----------------------------------------VAKQLQRMLTKQGIDFKLGAKVTG 264 (491)
T ss_dssp --------------H-----------------------------------------HHHHHHHHHHHTTCEEECSEEEEE
T ss_pred --------------H-----------------------------------------HHHHHHHHHHhCCCEEEECCeEEE
Confidence 1 1111224456678888876 666
Q ss_pred EeC--Ce--EEEcC---C--cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-
Q 013943 328 LKR--YA--VEFVN---G--RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG- 396 (433)
Q Consensus 328 ~~~--~~--v~~~~---g--~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~- 396 (433)
+.. ++ +.+.+ | +++++|.||+|+|+.|+...+ +...++..+++|++.+| +.++|+.|+|||+|||+..
T Consensus 265 i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~ 343 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGP 343 (491)
T ss_dssp EEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSC
T ss_pred EEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCc
Confidence 653 22 44542 4 579999999999999998433 55568877788999999 6788999999999999954
Q ss_pred --cccchhhHHHHHHHHHhh
Q 013943 397 --LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 --~~~a~~~g~~~a~~i~~~ 414 (433)
...|..+|+.+|++|.+.
T Consensus 344 ~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 344 MLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp CCHHHHHHHHHHHHHHHTTS
T ss_pred cchhHHHHHHHHHHHHHcCC
Confidence 447899999999999864
No 40
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.7e-32 Score=269.99 Aligned_cols=303 Identities=15% Similarity=0.151 Sum_probs=203.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCc----eeecCCCCCCCC----C-C
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFPSE----F-P 101 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~----~-~ 101 (433)
..+||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+...+..... ......+.+... . .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 4589999999999999999999999999999998 688877531 111100000000 000000110000 0 0
Q ss_pred CCCCHHHHH-----------HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccC
Q 013943 102 TYPSKQQFV-----------DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 102 ~~~~~~~~~-----------~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG 170 (433)
.......+. ..+...+++.+++++.++ ++.+ +. ..+.+.+.++ +...+.||+||+|||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~--~~~~v~~~~g------~~~~~~~d~lviAtG 157 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KD--GNVEVQKRDN------TTEVYSANHILVATG 157 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TT--SCEEEEESSS------CCEEEEEEEEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC--CEEEEEeCCC------cEEEEEeCEEEEcCC
Confidence 011222222 233344556677776663 4443 22 4566666543 124799999999999
Q ss_pred CCCCCccC-CccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCc
Q 013943 171 ENAEAVVP-EIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKS 249 (433)
Q Consensus 171 ~~~~p~~p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~ 249 (433)
++|..| ++||.+. ..+...+.. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 158 --s~p~~p~~i~g~~~----~~~~~~~~~-l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~--- 226 (479)
T 2hqm_A 158 --GKAIFPENIPGFEL----GTDSDGFFR-LEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE-TVLRKFDE--- 226 (479)
T ss_dssp --EEECCCTTSTTGGG----SBCHHHHHH-CSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH---
T ss_pred --CCCCCCCCCCCccc----ccchHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC-ccccccCH---
Confidence 888888 8887632 122211111 12357899999999999999999999999999999988 55553221
Q ss_pred chhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceE
Q 013943 250 TFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKR 327 (433)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~ 327 (433)
... ..+.+.+++.+|+++.+ +.+
T Consensus 227 --------------~~~-----------------------------------------~~l~~~l~~~Gv~i~~~~~v~~ 251 (479)
T 2hqm_A 227 --------------CIQ-----------------------------------------NTITDHYVKEGINVHKLSKIVK 251 (479)
T ss_dssp --------------HHH-----------------------------------------HHHHHHHHHHTCEEECSCCEEE
T ss_pred --------------HHH-----------------------------------------HHHHHHHHhCCeEEEeCCEEEE
Confidence 111 11123355567888876 677
Q ss_pred EeCC------eEEEcCC-cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---
Q 013943 328 LKRY------AVEFVNG-RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG--- 396 (433)
Q Consensus 328 ~~~~------~v~~~~g-~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~--- 396 (433)
+..+ .+.+.+| +++++|.||+|+|+.|+. .+ ++..++..+++|++.+| ++++|+.|+|||+|||+..
T Consensus 252 i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~ 329 (479)
T 2hqm_A 252 VEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIAD-EYQNTNVPNIYSLGDVVGKVEL 329 (479)
T ss_dssp EEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTTSSCC
T ss_pred EEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeEC-CCCccCCCCEEEEEecCCCccc
Confidence 7532 4677888 789999999999999998 67 67778887778999999 6778999999999999864
Q ss_pred cccchhhHHHHHHHHHhh
Q 013943 397 LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~ 414 (433)
+..|..+|+.+|++|.+.
T Consensus 330 ~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 330 TPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 346899999999999864
No 41
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=3.6e-31 Score=263.04 Aligned_cols=351 Identities=22% Similarity=0.302 Sum_probs=211.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-----CCEEEEecCCCCCCccccccc-CceeeecC--Cceeec--CCCCC-----
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG-----IPSILLERSNCIASLWQLKTY-DRLRLHLP--KQFCEL--PLMGF----- 96 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g-----~~v~iie~~~~~gg~w~~~~~-~~~~~~~~--~~~~~~--~~~~~----- 96 (433)
.++||+|||||++|+++|..|++.| .+|+|||+++.+| |...++ +...+..+ ..+..+ +..++
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 5689999999999999999999999 9999999999887 665443 22121110 000000 00000
Q ss_pred ----------CCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCC-CCeE--EEEEeecCcCCCceeEEEEeC
Q 013943 97 ----------PSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDAT-IRFW--RVKTTVGGQKCGVEEMEYRCR 163 (433)
Q Consensus 97 ----------~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~-~~~~--~v~~~~g~~~~~~~~~~~~~d 163 (433)
......++.+.++.+|+.++++++++.++++++|++++...+ .+.| +|++.++ .++..++.||
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g----~g~~~~~~~d 182 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA----DGEELVRTTR 182 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET----TSCEEEEEES
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC----CCceEEEEeC
Confidence 001123467899999999999999999999999999998721 1444 6766665 2334589999
Q ss_pred EEEEccCCCCCCccCCccCCCCCCC--ceeeccCCCCC-CCC-----CCCeEEEECCCCcHHHHHHHHhcc--CCCcEEE
Q 013943 164 WLVVATGENAEAVVPEIEGSDEFGG--DIRHTSLYKSG-EDF-----RGKRVLVVGCGNSGMEVCLDLCNH--DAMPSLV 233 (433)
Q Consensus 164 ~viiAtG~~~~p~~p~~~g~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~VvG~G~~a~e~a~~l~~~--g~~Vtl~ 233 (433)
+||+||| +.|.+|+. ...+.+ .++|+..+.+. ..+ .+++|+|||+|.+|+|+|..|.+. +.+|+++
T Consensus 183 ~lVlAtG--~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v 258 (463)
T 3s5w_A 183 ALVVSPG--GTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMI 258 (463)
T ss_dssp EEEECCC--CEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EEEECCC--CCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEE
Confidence 9999999 67877762 122233 56777765442 222 588999999999999999999999 8899999
Q ss_pred EecCcceecccccCCcchhhhH-H--HHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCch-
Q 013943 234 VRDTVHVLPQEMLGKSTFGLSM-W--LLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAG- 309 (433)
Q Consensus 234 ~r~~~~~lp~~~~~~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 309 (433)
.|++ .++|..+.......+.. + ....++.....++........ +.. ..+.....
T Consensus 259 ~r~~-~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~------~~~---------------~~~~~~~~~ 316 (463)
T 3s5w_A 259 LRAS-ALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTN------YSV---------------VDTDLIERI 316 (463)
T ss_dssp CSSS-SCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGT------SSC---------------BCHHHHHHH
T ss_pred EeCC-CCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccC------CCc---------------CCHHHHHHH
Confidence 9998 46665432110000000 0 011122222222222110000 000 00000000
Q ss_pred ----hhhhhh-cCCeEEecC--ceEEeC--Ce--EEEc---CCcE--ecccEEEEccCCCCC-CCCccccccccccCCCC
Q 013943 310 ----TLAKIK-SGHIRVFPG--IKRLKR--YA--VEFV---NGRC--ENFDAIILATGYRSN-VPSWLKESEMFSRKDGL 372 (433)
Q Consensus 310 ----~~~~~~-~~~v~~~~~--v~~~~~--~~--v~~~---~g~~--~~~D~vi~atG~~~~-~~~~~~~~~l~~~~~g~ 372 (433)
+.+.+. ..+|+++.+ |.++.. ++ +.+. +|+. +++|.||+|||+.|+ ...++.++.... |.
T Consensus 317 ~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~---g~ 393 (463)
T 3s5w_A 317 YGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL---GD 393 (463)
T ss_dssp HHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---C-
T ss_pred HHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---CC
Confidence 011111 257888887 666653 33 5555 6664 899999999999999 235666653322 66
Q ss_pred cCCCCCCCCCC----CCceEEeeecccc-------cccchhhHHHHHHHHHhhhcc
Q 013943 373 PRRPFPNGWKG----ESGLYSVGFTKRG-------LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 373 ~~~~~~~~~~~----~~~iya~Gd~~~~-------~~~a~~~g~~~a~~i~~~l~~ 417 (433)
+.+|..+.... .++||++|||... ...+...+..+++.|.+.+..
T Consensus 394 i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~~~~~ 449 (463)
T 3s5w_A 394 HEIGRDYRLQTDERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQHLKP 449 (463)
T ss_dssp -CCCTTSBCCBCTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHHHHC-
T ss_pred cccCcccccccCCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHhhcCC
Confidence 77774333222 5679999998742 223444444566666666644
No 42
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.98 E-value=1.6e-32 Score=272.55 Aligned_cols=294 Identities=15% Similarity=0.146 Sum_probs=198.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC----ceeecCCCCCCCCCCCCCCHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK----QFCELPLMGFPSEFPTYPSKQ 107 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 107 (433)
.|||+|||||++|+++|..|++.|++|+|||+.+.+||.|... +.+...+.... .+..+... .......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 4899999999999999999999999999999999999987642 11110000000 00000000 0111222
Q ss_pred HHH------------HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 108 QFV------------DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 108 ~~~------------~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
.+. .++.+++++.++++..+ ++..++ . ..++|...++ +...+.||+||+||| ++|
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~--~~~~V~~~~g------~~~~~~~d~lviAtG--~~p 144 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P--THVIVKTDEG------KEIEAETRYMIIASG--AET 144 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T--TEEEEEETTS------CEEEEEEEEEEECCC--EEE
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--C--CeEEEEcCCC------cEEEEecCEEEECCC--CCc
Confidence 222 22333333445665555 565554 2 4666776654 122399999999999 889
Q ss_pred ccCCccCCCCCCCceeeccCC---CCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceeccc-ccCCcch
Q 013943 176 VVPEIEGSDEFGGDIRHTSLY---KSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQE-MLGKSTF 251 (433)
Q Consensus 176 ~~p~~~g~~~~~~~~~~~~~~---~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~-~~~~~~~ 251 (433)
..|+++|.+. +.+.... .......+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|.. +.
T Consensus 145 ~~p~i~G~~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~----- 214 (466)
T 3l8k_A 145 AKLRLPGVEY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITLEDQ----- 214 (466)
T ss_dssp CCCCCTTGGG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCCH-----
T ss_pred cCCCCCCccc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCCCCH-----
Confidence 9998888752 1222111 11233457899999999999999999999999999999988 555533 21
Q ss_pred hhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEe
Q 013943 252 GLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLK 329 (433)
Q Consensus 252 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~ 329 (433)
...+.+ .+.++ |+++.+ +.++.
T Consensus 215 ------------~~~~~l-----------------------------------------~~~l~---v~i~~~~~v~~i~ 238 (466)
T 3l8k_A 215 ------------DIVNTL-----------------------------------------LSILK---LNIKFNSPVTEVK 238 (466)
T ss_dssp ------------HHHHHH-----------------------------------------HHHHC---CCEECSCCEEEEE
T ss_pred ------------HHHHHH-----------------------------------------HhcCE---EEEEECCEEEEEE
Confidence 111111 11121 555544 55554
Q ss_pred C---Ce--EEEc--CCc--EecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---
Q 013943 330 R---YA--VEFV--NGR--CENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG--- 396 (433)
Q Consensus 330 ~---~~--v~~~--~g~--~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~--- 396 (433)
. ++ +.+. +|+ ++++|.||+|+|+.|+.. + +.+.++..+++| +.+| +.++|+.|+|||+|||+..
T Consensus 239 ~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~ 315 (466)
T 3l8k_A 239 KIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVD-ETMKTNIPNVFATGDANGLAPY 315 (466)
T ss_dssp EEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCS
T ss_pred EcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeEC-CCccCCCCCEEEEEecCCCCcc
Confidence 4 33 5555 565 799999999999999995 5 677788877889 8888 7888999999999999974
Q ss_pred cccchhhHHHHHHHHHhh
Q 013943 397 LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~ 414 (433)
...|..+|+.+|++|.+.
T Consensus 316 ~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 316 YHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHhCC
Confidence 347899999999999864
No 43
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.98 E-value=3.7e-32 Score=271.42 Aligned_cols=309 Identities=13% Similarity=0.095 Sum_probs=203.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCCCCccccc-ccCceeeecCCc----eeecCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKE-RGIPSILLE--------RSNCIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFP 97 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~-~g~~v~iie--------~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~ 97 (433)
..|||+|||||++|+++|..|++ .|++|+||| +...+||.|... ++|...+..... +..+..+.+.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 35899999999999999999999 999999999 356788876541 222110000000 0000111110
Q ss_pred CCCC-CCCCHHHHHHHH-----------HHHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCE
Q 013943 98 SEFP-TYPSKQQFVDYL-----------EAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRW 164 (433)
Q Consensus 98 ~~~~-~~~~~~~~~~~l-----------~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~ 164 (433)
...+ ......++..+. ...+++. +++++.++ ++.++ . .. |.+.+...........+.||+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~--v~v~~~~~~~~~~~~~~~~d~ 158 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES--K--NV--VVVRETADPKSAVKERLQADH 158 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE--T--TE--EEEESSSSTTSCEEEEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee--C--CE--EEEeecCCccCCCCeEEEcCE
Confidence 0000 011223333322 2334555 77776664 54442 2 33 444410000000015799999
Q ss_pred EEEccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhcc---CCCcEEEEecCccee
Q 013943 165 LVVATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNH---DAMPSLVVRDTVHVL 241 (433)
Q Consensus 165 viiAtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~Vtl~~r~~~~~l 241 (433)
||+||| ++|..|+++|.+. ..+..++.. ....+++++|||+|.+|+|+|..|.+. |.+||++.+.+ +++
T Consensus 159 lViATG--s~p~~p~i~G~~~----~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~~l 230 (495)
T 2wpf_A 159 ILLATG--SWPQMPAIPGIEH----CISSNEAFY-LPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN-LIL 230 (495)
T ss_dssp EEECCC--EEECCCCCTTGGG----CEEHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS-SSC
T ss_pred EEEeCC--CCcCCCCCCCccc----cccHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC-ccc
Confidence 999999 8888888887632 233322222 223478999999999999999999999 99999999988 555
Q ss_pred cccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEE
Q 013943 242 PQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRV 321 (433)
Q Consensus 242 p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 321 (433)
|..+. .. ...+.+.+++.+|++
T Consensus 231 ~~~d~-----------------~~-----------------------------------------~~~l~~~l~~~GV~i 252 (495)
T 2wpf_A 231 RGFDE-----------------TI-----------------------------------------REEVTKQLTANGIEI 252 (495)
T ss_dssp TTSCH-----------------HH-----------------------------------------HHHHHHHHHHTTCEE
T ss_pred cccCH-----------------HH-----------------------------------------HHHHHHHHHhCCCEE
Confidence 53221 11 111123455678888
Q ss_pred ecC--ceEEeCC-----eEEEcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeec
Q 013943 322 FPG--IKRLKRY-----AVEFVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFT 393 (433)
Q Consensus 322 ~~~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~ 393 (433)
+.+ +.++..+ .+.+.+|+++++|.||+|+|+.|+...+ ++..++..+++|++.+| ++++|+.|+|||+|||
T Consensus 253 ~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~ 331 (495)
T 2wpf_A 253 MTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD-EFSRTNVPNIYAIGDI 331 (495)
T ss_dssp EESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC-TTCBCSSTTEEECGGG
T ss_pred EeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC-CCCccCCCCEEEEecc
Confidence 876 7777532 4677889899999999999999998434 56668877778999999 6788999999999999
Q ss_pred ccc---cccchhhHHHHHHHHHhh
Q 013943 394 KRG---LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 394 ~~~---~~~a~~~g~~~a~~i~~~ 414 (433)
+.. +..|..+|+.+|.+|.+.
T Consensus 332 ~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 332 TDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp GCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCccCHHHHHHHHHHHHHHhcCC
Confidence 974 336899999999999863
No 44
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=4e-32 Score=271.77 Aligned_cols=305 Identities=14% Similarity=0.161 Sum_probs=195.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeec----CCceeecCCCCCCCCCCCCCCHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHL----PKQFCELPLMGFPSEFPTYPSKQ 107 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 107 (433)
.|||+|||||++|+++|..|++.|++|+|||++ .+||.|... +.+...+.. ...+.....+.+... ......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 489999999999999999999999999999998 488877532 111100000 000000000111000 011222
Q ss_pred -----------HHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeec---CcCCCceeEEEEeCEEEEccCCCC
Q 013943 108 -----------QFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVG---GQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 108 -----------~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g---~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
.+...+...+++.+++++.++. +.++. ..+++...++ ..........+.||+||+||| +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~id~----~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtG--s 151 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTA-SFLSE----NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVG--N 151 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-CCC------------------------------CBSSEEECCC--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEeeC----CEEEEEeccccccccccCCCceEEEeCEEEECCC--C
Confidence 2223344455667888776643 22321 2333322000 000000015789999999999 7
Q ss_pred CCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhh
Q 013943 174 EAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGL 253 (433)
Q Consensus 174 ~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~ 253 (433)
+|..|+++|.+ ...+...+..... +++++|||+|.+|+|+|..|++.|.+||++.+.+ +++|..+.
T Consensus 152 ~p~~p~i~G~~----~~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~------- 217 (500)
T 1onf_A 152 KPVFPPVKGIE----NTISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RILRKFDE------- 217 (500)
T ss_dssp CBCCCSCTTGG----GCEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SSCTTSCH-------
T ss_pred CCCCCCCCCCC----cccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-ccCcccch-------
Confidence 88888888863 2344433333222 7899999999999999999999999999999988 55553221
Q ss_pred hHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC
Q 013943 254 SMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY 331 (433)
Q Consensus 254 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~ 331 (433)
. ....+.+.+++.+|+++.+ +.++..+
T Consensus 218 ----------~-----------------------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 218 ----------S-----------------------------------------VINVLENDMKKNNINIVTFADVVEIKKV 246 (500)
T ss_dssp ----------H-----------------------------------------HHHHHHHHHHHTTCEEECSCCEEEEEES
T ss_pred ----------h-----------------------------------------hHHHHHHHHHhCCCEEEECCEEEEEEEc
Confidence 1 1111224456678888876 7777532
Q ss_pred -----eEEEcCCcE-ecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecc----------
Q 013943 332 -----AVEFVNGRC-ENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTK---------- 394 (433)
Q Consensus 332 -----~v~~~~g~~-~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~---------- 394 (433)
.+.+.+|++ +++|.||+|+|+.|+...+ +...++.. ++|++.+| ++++|+.|+|||+|||+
T Consensus 247 ~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~~~ 324 (500)
T 1onf_A 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVD-ENQRTSVNNIYAVGDCCMVKKSKEIED 324 (500)
T ss_dssp STTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEEC-TTCBCSSSSEEECSTTEEEC-------
T ss_pred CCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEEC-CCcccCCCCEEEEeccccccccccccc
Confidence 367788888 9999999999999998445 56778877 78999999 66789999999999998
Q ss_pred ------------------------cc---cccchhhHHHHHHHHHhh
Q 013943 395 ------------------------RG---LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 395 ------------------------~~---~~~a~~~g~~~a~~i~~~ 414 (433)
.. +..|..+|+.+|++|.+.
T Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 325 LNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp -----------------------CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCC
Confidence 21 235899999999999863
No 45
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.98 E-value=9.6e-33 Score=269.64 Aligned_cols=283 Identities=18% Similarity=0.173 Sum_probs=201.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCC--EEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIP--SILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~--v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
+++|+|||||++|+++|..|++.|++ |+++|+++.++.. .. .+ ++.+... ... ++.. +
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~--~~---~l----~~~~~~g-~~~-~~~~--~------- 61 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD--RP---SL----SKAVLDG-SLE-RPPI--L------- 61 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC--SG---GG----GTHHHHT-SSS-SCCB--S-------
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC--Cc---cc----cHHHhCC-CCC-HHHh--c-------
Confidence 46899999999999999999999987 9999999865311 10 00 0000000 000 0000 0
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
...+++.+.+++++.+++|+.++... . +|.+.++ ..+.||+||+||| ++|+.|++||.+.. .+
T Consensus 62 -~~~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~ipG~~~~--~v 124 (410)
T 3ef6_A 62 -AEADWYGEARIDMLTGPEVTALDVQT--R--TISLDDG--------TTLSADAIVIATG--SRARTMALPGSQLP--GV 124 (410)
T ss_dssp -SCTTHHHHTTCEEEESCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCCCTTTTST--TE
T ss_pred -CCHHHHHHCCCEEEeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEccC--CcccCCCCCCcccc--ce
Confidence 01223456689999999999998654 3 3777765 6899999999999 78999888886521 12
Q ss_pred eeccCCCC-----CCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHH
Q 013943 191 RHTSLYKS-----GEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRL 265 (433)
Q Consensus 191 ~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~ 265 (433)
.+.....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++++. +++..
T Consensus 125 ~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~----------------~~~~~ 187 (410)
T 3ef6_A 125 VTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVRV----------------LGRRI 187 (410)
T ss_dssp ECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHHH----------------HCHHH
T ss_pred EEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchhh----------------cCHHH
Confidence 22111111 112357899999999999999999999999999999888 333321 11111
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC----eEEEcCCc
Q 013943 266 VDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY----AVEFVNGR 339 (433)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~ 339 (433)
. ..+.+.+++.+|+++.+ +.++..+ ++.+.+|+
T Consensus 188 ~-----------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~ 226 (410)
T 3ef6_A 188 G-----------------------------------------AWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGR 226 (410)
T ss_dssp H-----------------------------------------HHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSC
T ss_pred H-----------------------------------------HHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCC
Confidence 1 11123455568888866 7777765 58899999
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc------------cccchhhHHHH
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG------------LLGVAMDAKRI 407 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~------------~~~a~~~g~~~ 407 (433)
++++|.||+|+|+.|+. .++++.++..+ +| +.+| +.++++.|+|||+|||+.. +..|..+|+.+
T Consensus 227 ~i~aD~Vv~a~G~~p~~-~l~~~~gl~~~-~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~a 302 (410)
T 3ef6_A 227 SFVADSALICVGAEPAD-QLARQAGLACD-RG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAV 302 (410)
T ss_dssp EEECSEEEECSCEEECC-HHHHHTTCCBS-SS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHH
T ss_pred EEEcCEEEEeeCCeecH-HHHHhCCCccC-Ce-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHH
Confidence 99999999999999998 68888888764 55 7788 6778999999999999863 24689999999
Q ss_pred HHHHHhh
Q 013943 408 AQDIESC 414 (433)
Q Consensus 408 a~~i~~~ 414 (433)
|++|.+.
T Consensus 303 a~~i~g~ 309 (410)
T 3ef6_A 303 AAAILGK 309 (410)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9999875
No 46
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.98 E-value=6.3e-32 Score=269.01 Aligned_cols=306 Identities=12% Similarity=0.067 Sum_probs=205.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCc----ee--ecCCCCCCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FC--ELPLMGFPSEFPTYP 104 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~ 104 (433)
.++||+|||||++|+++|..|++.|++|+|||+++.+||.|... +.+.-.+..... +. .+....++... ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~-~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSE-VRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESC-EEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCC-Ccc
Confidence 35899999999999999999999999999999998899987542 111100000000 00 00000000000 001
Q ss_pred CHHHH-------H----HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 105 SKQQF-------V----DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 105 ~~~~~-------~----~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
....+ . ..+..++++.+++++.++. ..+ +. ..++|.+.++ ...++.||+||+||| +
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~~--~~--~~~~v~~~~g------g~~~~~~d~lViAtG--s 150 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYG-KIT--GK--NQVTATKADG------GTQVIDTKNILIATG--S 150 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEE-EEE--ET--TEEEEECTTS------CEEEEEEEEEEECCC--E
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEe--cC--CEEEEEecCC------CcEEEEeCEEEECCC--C
Confidence 12222 2 2234566677888877753 333 23 5666765541 125799999999999 7
Q ss_pred CCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceec-ccccCCcchh
Q 013943 174 EAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLP-QEMLGKSTFG 252 (433)
Q Consensus 174 ~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp-~~~~~~~~~~ 252 (433)
+|..|+++|.+.. .+++..+.... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++| ..+.
T Consensus 151 ~p~~p~i~g~~~~--~v~t~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~------ 220 (474)
T 1zmd_A 151 EVTPFPGITIDED--TIVSSTGALSL-KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGIDM------ 220 (474)
T ss_dssp EECCCTTCCCCSS--SEECHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSCCH------
T ss_pred CCCCCCCCCCCcC--cEEcHHHHhhc-cccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCcccCH------
Confidence 8888888886531 23443333322 2346899999999999999999999999999999988 5555 2211
Q ss_pred hhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC
Q 013943 253 LSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR 330 (433)
Q Consensus 253 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~ 330 (433)
.. ...+.+.+++.+|+++.+ +.++..
T Consensus 221 -----------~~-----------------------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~ 248 (474)
T 1zmd_A 221 -----------EI-----------------------------------------SKNFQRILQKQGFKFKLNTKVTGATK 248 (474)
T ss_dssp -----------HH-----------------------------------------HHHHHHHHHHTTCEEECSEEEEEEEE
T ss_pred -----------HH-----------------------------------------HHHHHHHHHHCCCEEEeCceEEEEEE
Confidence 11 111124455678888876 777753
Q ss_pred C--e-EEE-------cCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---
Q 013943 331 Y--A-VEF-------VNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG--- 396 (433)
Q Consensus 331 ~--~-v~~-------~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~--- 396 (433)
+ + +.+ .+++++++|.||+|+|+.|+...+ +++.++..+++|++.+| +.++|+.|+|||+|||+..
T Consensus 249 ~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~ 327 (474)
T 1zmd_A 249 KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVN-TRFQTKIPNIYAIGDVVAGPML 327 (474)
T ss_dssp CTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCC-TTCBCSSTTEEECGGGSSSCCC
T ss_pred cCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEEC-cCCccCCCCEEEeeecCCCCcc
Confidence 2 2 433 355679999999999999998422 45667777678999999 6788999999999999975
Q ss_pred cccchhhHHHHHHHHHhh
Q 013943 397 LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~ 414 (433)
...|..+|+.+|++|.+.
T Consensus 328 ~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 328 AHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 346899999999999864
No 47
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=6.2e-32 Score=268.89 Aligned_cols=308 Identities=14% Similarity=0.114 Sum_probs=206.7
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC----------ceeecCCCCCCCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK----------QFCELPLMGFPSE 99 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~ 99 (433)
..++||+|||||++|+++|..|++.|++|+|||+++.+||.|... +.+...+.... ..+.+........
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 357999999999999999999999999999999998899987542 11100000000 0000000000000
Q ss_pred CCCCC-CH----HHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 100 FPTYP-SK----QQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 100 ~~~~~-~~----~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
+..+. .. ..+...+...+++.+++++.++.+. + +. ..++|.+.+| +...++||+||+||| ++
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~v~~~~G------~~~~i~~d~lIiAtG--s~ 150 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SP--SEISVDTIEG------ENTVVKGKHIIIATG--SD 150 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ET--TEEEECCSSS------CCEEEECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CEEEEEeCCC------ceEEEEcCEEEECCC--CC
Confidence 00000 11 1223334556667788888887543 3 23 4566654432 125799999999999 78
Q ss_pred CccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhh
Q 013943 175 AVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLS 254 (433)
Q Consensus 175 p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~ 254 (433)
|..|+++|.+.. .+.+..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 151 p~~p~~~g~~~~--~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-------- 218 (470)
T 1dxl_A 151 VKSLPGVTIDEK--KIVSSTGALA-LSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDA-------- 218 (470)
T ss_dssp ECCBTTBCCCSS--SEECHHHHTT-CSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH--------
T ss_pred CCCCCCCCCCcc--cEEeHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccH--------
Confidence 888888876431 2333333222 22357899999999999999999999999999999988 55553221
Q ss_pred HHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe
Q 013943 255 MWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA 332 (433)
Q Consensus 255 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~ 332 (433)
.. ...+.+.+++.+|+++.+ +.++..++
T Consensus 219 ---------~~-----------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~ 248 (470)
T 1dxl_A 219 ---------EI-----------------------------------------RKQFQRSLEKQGMKFKLKTKVVGVDTSG 248 (470)
T ss_dssp ---------HH-----------------------------------------HHHHHHHHHHSSCCEECSEEEEEEECSS
T ss_pred ---------HH-----------------------------------------HHHHHHHHHHcCCEEEeCCEEEEEEEcC
Confidence 11 111123455667888876 77776532
Q ss_pred ----EEEc---CC--cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---ccc
Q 013943 333 ----VEFV---NG--RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLG 399 (433)
Q Consensus 333 ----v~~~---~g--~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~ 399 (433)
+.+. +| +++++|.||+|+|+.|+...+ +++.++..+++|++.+| +.++|+.|+|||+|||+.. ...
T Consensus 249 ~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~ 327 (470)
T 1dxl_A 249 DGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLAHK 327 (470)
T ss_dssp SSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCHHH
T ss_pred CeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEEeccCCCCccHHH
Confidence 3443 45 679999999999999998322 56668877678999999 6788999999999999864 346
Q ss_pred chhhHHHHHHHHHhh
Q 013943 400 VAMDAKRIAQDIESC 414 (433)
Q Consensus 400 a~~~g~~~a~~i~~~ 414 (433)
|..+|+.+|.+|.+.
T Consensus 328 A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 328 AEEDGVACVEYLAGK 342 (470)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999863
No 48
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=1.6e-31 Score=266.42 Aligned_cols=307 Identities=14% Similarity=0.112 Sum_probs=204.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC----c--eeecCCCCCCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK----Q--FCELPLMGFPSEFPTYP 104 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~ 104 (433)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|... +.+...+.... . .......++.. ...
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~---~~~ 81 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPE---PEL 81 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCC---CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCC---Ccc
Confidence 35899999999999999999999999999999988888865431 11110000000 0 00000111100 011
Q ss_pred CHHHHH-----------HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecC----cCCCceeEEEEeCEEEEcc
Q 013943 105 SKQQFV-----------DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGG----QKCGVEEMEYRCRWLVVAT 169 (433)
Q Consensus 105 ~~~~~~-----------~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~----~~~~~~~~~~~~d~viiAt 169 (433)
....+. ..+...+++.+++++.++.+. .+. ..+.+.+.++. ....++..+++||+||+||
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAt 156 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAA 156 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccC--CEEEEEecCCcccccccccCcceEEEcCEEEECC
Confidence 222222 224455667788888776543 233 45666544320 0001123579999999999
Q ss_pred CCCCCCccCC-ccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCC
Q 013943 170 GENAEAVVPE-IEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGK 248 (433)
Q Consensus 170 G~~~~p~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~ 248 (433)
| ++|..|+ ++ .+. .+.+..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 157 G--s~p~~~~~i~-~~~---~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~-- 226 (482)
T 1ojt_A 157 G--SRVTKLPFIP-EDP---RIIDSSGALA-LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GLMQGADR-- 226 (482)
T ss_dssp C--EEECCCSSCC-CCT---TEECHHHHTT-CCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH--
T ss_pred C--CCCCCCCCCC-ccC---cEEcHHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-ccccccCH--
Confidence 9 7777776 44 221 2333333222 22347899999999999999999999999999999988 55553221
Q ss_pred cchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ce
Q 013943 249 STFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IK 326 (433)
Q Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~ 326 (433)
. ....+.+.+++.+|+++.+ +.
T Consensus 227 ---------------~-----------------------------------------~~~~l~~~l~~~gV~i~~~~~v~ 250 (482)
T 1ojt_A 227 ---------------D-----------------------------------------LVKVWQKQNEYRFDNIMVNTKTV 250 (482)
T ss_dssp ---------------H-----------------------------------------HHHHHHHHHGGGEEEEECSCEEE
T ss_pred ---------------H-----------------------------------------HHHHHHHHHHhcCCEEEECCEEE
Confidence 1 1111124456678898887 77
Q ss_pred EEeCC----eEEEcC----CcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-
Q 013943 327 RLKRY----AVEFVN----GRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG- 396 (433)
Q Consensus 327 ~~~~~----~v~~~~----g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~- 396 (433)
++..+ .+.+.+ |+++++|.||+|+|+.||...+ +++.++..+++|++.+| ++++|+.|+|||+|||+..
T Consensus 251 ~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~ 329 (482)
T 1ojt_A 251 AVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD-KQMRTNVPHIYAIGDIVGQP 329 (482)
T ss_dssp EEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCC-TTSBCSSTTEEECGGGTCSS
T ss_pred EEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeC-CCcccCCCCEEEEEcccCCC
Confidence 77532 366666 7789999999999999998323 56678877677999999 6788999999999999974
Q ss_pred --cccchhhHHHHHHHHHh
Q 013943 397 --LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 397 --~~~a~~~g~~~a~~i~~ 413 (433)
...|..+|+.+|++|.+
T Consensus 330 ~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 330 MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHcC
Confidence 34689999999999986
No 49
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.97 E-value=5.6e-32 Score=263.97 Aligned_cols=281 Identities=16% Similarity=0.149 Sum_probs=200.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI--PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
..+||+|||||++|+++|..|++.|. +|+++|+++.++ |..... ++.+..-.. .+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~--~~~~~~-------~~~~~~~~~---~~~~--------- 64 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP--YDRPPL-------SKDFMAHGD---AEKI--------- 64 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC--BCSGGG-------GTHHHHHCC---GGGS---------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc--ccCCCC-------CHHHhCCCc---hhhh---------
Confidence 45899999999999999999999998 599999987543 111000 000000000 0000
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCc-cCCCCCCC
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEI-EGSDEFGG 188 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~-~g~~~~~~ 188 (433)
++. ++.+.+++++.+++|+.++... ++|++.++ ..+.||+||+||| ++|..|++ +|.+ .+
T Consensus 65 --~~~-~~~~~~v~~~~~~~v~~i~~~~----~~v~~~~g--------~~~~~d~lviAtG--~~~~~~~i~~G~~--~~ 125 (408)
T 2gqw_A 65 --RLD-CKRAPEVEWLLGVTAQSFDPQA----HTVALSDG--------RTLPYGTLVLATG--AAPRALPTLQGAT--MP 125 (408)
T ss_dssp --BCC-CTTSCSCEEEETCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCGGGTTCS--SC
T ss_pred --hHH-HHHHCCCEEEcCCEEEEEECCC----CEEEECCC--------CEEECCEEEECCC--CCCCCCCccCCCC--Cc
Confidence 000 2334578889998899987643 34766665 5899999999999 78888888 8865 22
Q ss_pred ceeeccCCC-----CCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 189 DIRHTSLYK-----SGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 189 ~~~~~~~~~-----~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
+.+..... ......+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|+.. ++
T Consensus 126 -v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~----------------~~ 187 (408)
T 2gqw_A 126 -VHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAA----------------PA 187 (408)
T ss_dssp -EEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTS----------------CH
T ss_pred -EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccccc----------------CH
Confidence 22221111 1112347899999999999999999999999999999988 5544211 11
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEEcCCcEe
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEFVNGRCE 341 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~ 341 (433)
... ..+.+.+++.+|+++.+ +.++.++.+.+.+|+++
T Consensus 188 ~~~-----------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i 226 (408)
T 2gqw_A 188 TLA-----------------------------------------DFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRI 226 (408)
T ss_dssp HHH-----------------------------------------HHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEE
T ss_pred HHH-----------------------------------------HHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEE
Confidence 111 11124455678888876 77777557888999999
Q ss_pred cccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccccc-------------ccchhhHHHHH
Q 013943 342 NFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL-------------LGVAMDAKRIA 408 (433)
Q Consensus 342 ~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-------------~~a~~~g~~~a 408 (433)
++|.||+|+|+.|+. .++++.++.. ++| +.+| ++++|+.|+|||+|||+... ..|..+|+.+|
T Consensus 227 ~~D~vi~a~G~~p~~-~l~~~~gl~~-~~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa 302 (408)
T 2gqw_A 227 AADMVVVGIGVLAND-ALARAAGLAC-DDG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVA 302 (408)
T ss_dssp ECSEEEECSCEEECC-HHHHHHTCCB-SSS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHH
T ss_pred EcCEEEECcCCCccH-HHHHhCCCCC-CCC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHH
Confidence 999999999999998 5777778876 356 8888 67889999999999999632 25899999999
Q ss_pred HHHHhhh
Q 013943 409 QDIESCW 415 (433)
Q Consensus 409 ~~i~~~l 415 (433)
.+|.+..
T Consensus 303 ~~i~g~~ 309 (408)
T 2gqw_A 303 RHLVDPT 309 (408)
T ss_dssp HHHHCTT
T ss_pred HHhcCCC
Confidence 9998653
No 50
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=9.3e-32 Score=266.39 Aligned_cols=302 Identities=16% Similarity=0.174 Sum_probs=202.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecC---------CceeecCCCCCCCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLP---------KQFCELPLMGFPSEFPT 102 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 102 (433)
++||+|||||++|+++|..|++.|++|+|+|++ .+||.|... +.+...+... ...+.+........+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 589999999999999999999999999999998 788876431 1111000000 00000000000000000
Q ss_pred CC-CH----HHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 103 YP-SK----QQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 103 ~~-~~----~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+. .. +.+..++.+.+++.+++++.++.+. + +. ..+++.+.++ ...+.||+||+||| ++|..
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~G-------~~~i~~d~lViATG--s~p~~ 147 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTVRVVNGDS-------AQTYTFKNAIIATG--SRPIE 147 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET--TEEEEEETTE-------EEEEECSEEEECCC--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeEEEEeCCC-------cEEEEeCEEEEecC--CCCCC
Confidence 00 11 1233344556667788888776543 3 23 5666766543 25799999999999 78888
Q ss_pred CCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHH
Q 013943 178 PEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWL 257 (433)
Q Consensus 178 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~ 257 (433)
|+++|.+. .+.+..+... ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ +++|..+.
T Consensus 148 ~~~~g~~~---~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----------- 211 (455)
T 1ebd_A 148 LPNFKFSN---RILDSTGALN-LGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEK----------- 211 (455)
T ss_dssp BTTBCCCS---SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH-----------
T ss_pred CCCCCccc---eEecHHHHhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCH-----------
Confidence 88877543 2333332222 22347899999999999999999999999999999988 55553211
Q ss_pred HhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--CeE
Q 013943 258 LKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--YAV 333 (433)
Q Consensus 258 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v 333 (433)
... ..+.+.+++.+|+++.+ +.++.. +++
T Consensus 212 ------~~~-----------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~ 244 (455)
T 1ebd_A 212 ------QMA-----------------------------------------AIIKKRLKKKGVEVVTNALAKGAEEREDGV 244 (455)
T ss_dssp ------HHH-----------------------------------------HHHHHHHHHTTCEEEESEEEEEEEEETTEE
T ss_pred ------HHH-----------------------------------------HHHHHHHHHCCCEEEeCCEEEEEEEeCCeE
Confidence 111 11123455567888876 666653 233
Q ss_pred --EEc---CCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchhhH
Q 013943 334 --EFV---NGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAMDA 404 (433)
Q Consensus 334 --~~~---~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~~g 404 (433)
.+. +++++++|.||+|+|+.|+...+ +++.++..+++|++.+| +.++|+.|+|||+|||+.. ...|..+|
T Consensus 245 ~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 323 (455)
T 1ebd_A 245 TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKASYEG 323 (455)
T ss_dssp EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHH
T ss_pred EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHHHHHH
Confidence 333 45679999999999999998322 56667777678999999 6788999999999999874 34689999
Q ss_pred HHHHHHHHh
Q 013943 405 KRIAQDIES 413 (433)
Q Consensus 405 ~~~a~~i~~ 413 (433)
+.+|++|.+
T Consensus 324 ~~aa~~i~~ 332 (455)
T 1ebd_A 324 KVAAEAIAG 332 (455)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHcC
Confidence 999999986
No 51
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.97 E-value=4.7e-32 Score=267.88 Aligned_cols=298 Identities=16% Similarity=0.151 Sum_probs=198.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCc----ee-ecCCCCCCCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FC-ELPLMGFPSEFPTYPS 105 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 105 (433)
..+||+|||||++|+++|..|++.|++|+|||++ .+||.|... +.+.-.+..... +. ....+.+... .....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~ 80 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFN 80 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccC
Confidence 3589999999999999999999999999999998 688876431 111100000000 00 0000000000 00011
Q ss_pred HHHH-----------HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 106 KQQF-----------VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 106 ~~~~-----------~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
...+ ...+...+.+.+++++.++ ++.++ . .. +.+ ++ ..+.||+||+||| ++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i~--~--~~--v~~-~g--------~~~~~d~lviAtG--s~ 142 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFVD--A--KT--LEV-NG--------ETITADHILIATG--GR 142 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CEEEE--T--TE--EEE-TT--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEec--C--CE--EEE-CC--------EEEEeCEEEECCC--CC
Confidence 2222 2223334456678877664 34443 2 33 444 44 6899999999999 88
Q ss_pred CccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhh
Q 013943 175 AVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLS 254 (433)
Q Consensus 175 p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~ 254 (433)
|..|++||.+. ..+...+.. ....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ ++++..+.
T Consensus 143 p~~p~i~g~~~----~~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-------- 208 (450)
T 1ges_A 143 PSHPDIPGVEY----GIDSDGFFA-LPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDP-------- 208 (450)
T ss_dssp ECCCCSTTGGG----SBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH--------
T ss_pred CCCCCCCCccc----eecHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhH--------
Confidence 88888887632 122222211 12347899999999999999999999999999999887 44443211
Q ss_pred HHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-
Q 013943 255 MWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY- 331 (433)
Q Consensus 255 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~- 331 (433)
...+ .+.+.+++.+|+++.+ +.++..+
T Consensus 209 ---------~~~~-----------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~ 238 (450)
T 1ges_A 209 ---------MISE-----------------------------------------TLVEVMNAEGPQLHTNAIPKAVVKNT 238 (450)
T ss_dssp ---------HHHH-----------------------------------------HHHHHHHHHSCEEECSCCEEEEEECT
T ss_pred ---------HHHH-----------------------------------------HHHHHHHHCCCEEEeCCEEEEEEEeC
Confidence 1111 1123344557787776 6666532
Q ss_pred ----eEEEcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchhh
Q 013943 332 ----AVEFVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAMD 403 (433)
Q Consensus 332 ----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~~ 403 (433)
.+.+.+|+++++|.||+|+|+.|+...+ ++..++..+++|++.+| ++++|+.|+|||+|||+.. +..|..+
T Consensus 239 ~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~ 317 (450)
T 1ges_A 239 DGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAVAA 317 (450)
T ss_dssp TSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHHHH
T ss_pred CcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHHHH
Confidence 4677889899999999999999998434 45668877778999999 6778999999999999864 3468999
Q ss_pred HHHHHHHHHhh
Q 013943 404 AKRIAQDIESC 414 (433)
Q Consensus 404 g~~~a~~i~~~ 414 (433)
|+.+|.+|.+.
T Consensus 318 g~~aa~~i~~~ 328 (450)
T 1ges_A 318 GRRLSERLFNN 328 (450)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999999863
No 52
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.97 E-value=1.4e-31 Score=266.12 Aligned_cols=305 Identities=14% Similarity=0.123 Sum_probs=203.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCc----eee-cCCCCCCCCCCCCCCH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FCE-LPLMGFPSEFPTYPSK 106 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 106 (433)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|... +.+...+..... +.. +..+..+.........
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 5899999999999999999999999999999998899876531 111100000000 000 0000000000000111
Q ss_pred HH-----------HHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 107 QQ-----------FVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 107 ~~-----------~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
.. +...+..++++.+++++.++.+ .+ +. ..+++.+.+| +...+.||+||+||| ++|
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~--~~~~v~~~~G------~~~~~~~d~lviAtG--~~p 148 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FE--TA--HSIRVNGLDG------KQEMLETKKTIIATG--SEP 148 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EE--ET--TEEEEEETTS------CEEEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--eC--CEEEEEecCC------ceEEEEcCEEEECCC--CCc
Confidence 22 2223455666778888877643 33 23 4566665432 135799999999999 788
Q ss_pred ccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhH
Q 013943 176 VVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSM 255 (433)
Q Consensus 176 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~ 255 (433)
..|+++|.+.. .+.+..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 149 ~~p~~~g~~~~--~v~t~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~--------- 215 (468)
T 2qae_A 149 TELPFLPFDEK--VVLSSTGALA-LPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDE--------- 215 (468)
T ss_dssp CCBTTBCCCSS--SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH---------
T ss_pred CCCCCCCCCcC--ceechHHHhh-cccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCH---------
Confidence 88888876431 2333332222 22357899999999999999999999999999999988 55553221
Q ss_pred HHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhh-hcCCeEEecC--ceEEeCC-
Q 013943 256 WLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKI-KSGHIRVFPG--IKRLKRY- 331 (433)
Q Consensus 256 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~~~~~- 331 (433)
.. ...+.+.+ ++.+|+++.+ +.++..+
T Consensus 216 --------~~-----------------------------------------~~~l~~~l~~~~gv~i~~~~~v~~i~~~~ 246 (468)
T 2qae_A 216 --------DV-----------------------------------------TNALVGALAKNEKMKFMTSTKVVGGTNNG 246 (468)
T ss_dssp --------HH-----------------------------------------HHHHHHHHHHHTCCEEECSCEEEEEEECS
T ss_pred --------HH-----------------------------------------HHHHHHHHhhcCCcEEEeCCEEEEEEEcC
Confidence 11 11112445 5678888876 7777543
Q ss_pred -e--EEEc--CC--cEecccEEEEccCCCCCCCCc--cccccccccCCCCcCCCCCCCCCCCCceEEeeeccc-cc---c
Q 013943 332 -A--VEFV--NG--RCENFDAIILATGYRSNVPSW--LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR-GL---L 398 (433)
Q Consensus 332 -~--v~~~--~g--~~~~~D~vi~atG~~~~~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~-~~---~ 398 (433)
+ +.+. +| +++++|.||+|+|+.|+. .+ +++.++..+++|++.+| ++++|+.|+|||+|||+. .. .
T Consensus 247 ~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~-~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~ 324 (468)
T 2qae_A 247 DSVSLEVEGKNGKRETVTCEALLVSVGRRPFT-GGLGLDKINVAKNERGFVKIG-DHFETSIPDVYAIGDVVDKGPMLAH 324 (468)
T ss_dssp SSEEEEEECC---EEEEEESEEEECSCEEECC-TTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSCHH
T ss_pred CeEEEEEEcCCCceEEEECCEEEECCCcccCC-CCCCchhcCCccCCCCCEeEC-CCcccCCCCEEEeeccCCCCCccHh
Confidence 2 4444 66 579999999999999998 45 45667777678999999 678899999999999998 43 3
Q ss_pred cchhhHHHHHHHHHhh
Q 013943 399 GVAMDAKRIAQDIESC 414 (433)
Q Consensus 399 ~a~~~g~~~a~~i~~~ 414 (433)
.|..+|+.+|.+|.+.
T Consensus 325 ~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 325 KAEDEGVACAEILAGK 340 (468)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 6899999999999863
No 53
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=1.5e-31 Score=265.08 Aligned_cols=298 Identities=18% Similarity=0.237 Sum_probs=199.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC----ceeecCCCCCCCCCCCCCCH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK----QFCELPLMGFPSEFPTYPSK 106 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 106 (433)
..+||+|||||++|+++|..|++.|++|+|||++ .+||.|... +.+...+.... .+.....+.+... ......
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~ 80 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDW 80 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCH
Confidence 4689999999999999999999999999999998 688877531 11110000000 0000000010000 001122
Q ss_pred HHHH-----------HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 107 QQFV-----------DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 107 ~~~~-----------~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
..+. ..+...+.+.+++++.++ ++.++ . .. |.+ ++ ..+.||+||+||| ++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~--~--~~--v~~-~g--------~~~~~d~lviAtG--s~p 142 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVD--A--HT--IEV-EG--------QRLSADHIVIATG--GRP 142 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--T--TE--EEE-TT--------EEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEcc--C--CE--EEE-CC--------EEEEcCEEEECCC--CCC
Confidence 2222 223334456678877663 44443 2 33 444 44 6899999999999 788
Q ss_pred ccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhH
Q 013943 176 VVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSM 255 (433)
Q Consensus 176 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~ 255 (433)
..|++||.+. ..+...+.. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++..+.
T Consensus 143 ~~p~i~G~~~----~~~~~~~~~-~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~--------- 207 (463)
T 2r9z_A 143 IVPRLPGAEL----GITSDGFFA-LQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDP--------- 207 (463)
T ss_dssp CCCSCTTGGG----SBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH---------
T ss_pred CCCCCCCccc----eecHHHHhh-hhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCH---------
Confidence 8888887632 222222211 12347899999999999999999999999999999887 44442211
Q ss_pred HHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC--
Q 013943 256 WLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-- 331 (433)
Q Consensus 256 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-- 331 (433)
... ..+.+.+++.+|+++.+ +.++..+
T Consensus 208 --------~~~-----------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 238 (463)
T 2r9z_A 208 --------LLS-----------------------------------------ATLAENMHAQGIETHLEFAVAALERDAQ 238 (463)
T ss_dssp --------HHH-----------------------------------------HHHHHHHHHTTCEEESSCCEEEEEEETT
T ss_pred --------HHH-----------------------------------------HHHHHHHHHCCCEEEeCCEEEEEEEeCC
Confidence 110 11123455678888876 7777532
Q ss_pred --eEEEcCCc-EecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchhhH
Q 013943 332 --AVEFVNGR-CENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAMDA 404 (433)
Q Consensus 332 --~v~~~~g~-~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~~g 404 (433)
.+.+.+|+ ++++|.||+|+|+.|+...+ +++.++..+++|++.+| ++++|+.|+|||+|||+.. ...|..+|
T Consensus 239 ~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 317 (463)
T 2r9z_A 239 GTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVAIAAG 317 (463)
T ss_dssp EEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHH
T ss_pred eEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHHHHHH
Confidence 46778898 89999999999999998434 45557777778999999 6778999999999999864 34689999
Q ss_pred HHHHHHHHhh
Q 013943 405 KRIAQDIESC 414 (433)
Q Consensus 405 ~~~a~~i~~~ 414 (433)
+.+|.+|.+.
T Consensus 318 ~~aa~~i~g~ 327 (463)
T 2r9z_A 318 RRLAERLFDG 327 (463)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHcCC
Confidence 9999999863
No 54
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=1.1e-31 Score=267.64 Aligned_cols=305 Identities=15% Similarity=0.082 Sum_probs=201.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccc-cCceeeecCCc----ee-ecCCCCCCCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKT-YDRLRLHLPKQ----FC-ELPLMGFPSEFPTYPS 105 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~-~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 105 (433)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.|.... .+...+..... +. .+.....+........
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 358999999999999999999999999999999888998765421 11000000000 00 0000000000000012
Q ss_pred HHHH-----------HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEE------EEeCEEEEc
Q 013943 106 KQQF-----------VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEME------YRCRWLVVA 168 (433)
Q Consensus 106 ~~~~-----------~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~------~~~d~viiA 168 (433)
..++ ...+...+++.+++++.++.+.. +...++|.+.+| +... +.||+||+|
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~-----~~~~v~V~~~~G------~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE-----DETKIRVTPVDG------LEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES-----SSSEEEEECCTT------CTTCCSSCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc-----cCCeEEEEecCC------CcccccccceEEeCEEEEC
Confidence 2222 22244556677888888876531 225666665442 0124 899999999
Q ss_pred cCCCCCCccCCccCCCCCCC-ceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccC
Q 013943 169 TGENAEAVVPEIEGSDEFGG-DIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLG 247 (433)
Q Consensus 169 tG~~~~p~~p~~~g~~~~~~-~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~ 247 (433)
|| ++|. .+||... .+ .+.+..+... ....+++++|||+|.+|+|+|..|++.|.+||++.+.+ +++|..+.
T Consensus 153 tG--s~p~--~~~g~~~-~~~~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~- 224 (478)
T 1v59_A 153 TG--SEVT--PFPGIEI-DEEKIVSSTGALS-LKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASMDG- 224 (478)
T ss_dssp CC--EEEC--CCTTCCC-CSSSEECHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSSCH-
T ss_pred cC--CCCC--CCCCCCC-CCceEEcHHHHHh-hhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccccccCH-
Confidence 99 5553 3445432 22 2333332222 22247899999999999999999999999999999988 55553221
Q ss_pred CcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--c
Q 013943 248 KSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--I 325 (433)
Q Consensus 248 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v 325 (433)
. ....+.+.+++.+|+++.+ +
T Consensus 225 ----------------~-----------------------------------------~~~~l~~~l~~~gv~i~~~~~v 247 (478)
T 1v59_A 225 ----------------E-----------------------------------------VAKATQKFLKKQGLDFKLSTKV 247 (478)
T ss_dssp ----------------H-----------------------------------------HHHHHHHHHHHTTCEEECSEEE
T ss_pred ----------------H-----------------------------------------HHHHHHHHHHHCCCEEEeCCEE
Confidence 1 1111124455678888876 7
Q ss_pred eEEeC---C---eEEEc-----CCcEecccEEEEccCCCCCCCC-ccccccccccCCCCcCCCCCCCCCCCCceEEeeec
Q 013943 326 KRLKR---Y---AVEFV-----NGRCENFDAIILATGYRSNVPS-WLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFT 393 (433)
Q Consensus 326 ~~~~~---~---~v~~~-----~g~~~~~D~vi~atG~~~~~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~ 393 (433)
.++.. + .+.+. +++++++|.||+|+|+.|+... ++++.++..+++|++.+| +.++|+.|+|||+|||
T Consensus 248 ~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~ 326 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVID-DQFNSKFPHIKVVGDV 326 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCC-TTSBCSSTTEEECGGG
T ss_pred EEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeEC-cCCccCCCCEEEeecc
Confidence 77754 2 24554 3567999999999999999843 567778877778999999 6788999999999999
Q ss_pred ccc---cccchhhHHHHHHHHHh
Q 013943 394 KRG---LLGVAMDAKRIAQDIES 413 (433)
Q Consensus 394 ~~~---~~~a~~~g~~~a~~i~~ 413 (433)
+.. ...|..+|+.+|++|.+
T Consensus 327 ~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 327 TFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHcC
Confidence 975 34789999999999987
No 55
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=4.5e-32 Score=267.01 Aligned_cols=278 Identities=19% Similarity=0.209 Sum_probs=194.0
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
...+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.+. ++ .+....++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip---------~~~~~~~~~ 175 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IP---------GFKLEKSVV 175 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SC---------TTTSCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CC---------CccCCHHHH
Confidence 457899999999999999999999999999999999999987542 11 112235667
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
++..+++++.++++++++.|. .. +++++ ..+.||+||+|||. ..++.++++|.+. .+ +
T Consensus 176 ~~~~~~l~~~gv~~~~~~~v~--------~~--v~~~~---------~~~~~d~vvlAtG~-~~~~~~~ipG~~~-~g-v 233 (456)
T 2vdc_G 176 ERRVKLLADAGVIYHPNFEVG--------RD--ASLPE---------LRRKHVAVLVATGV-YKARDIKAPGSGL-GN-I 233 (456)
T ss_dssp HHHHHHHHHTTCEEETTCCBT--------TT--BCHHH---------HHSSCSEEEECCCC-CEECCTTCSCCTT-TT-E
T ss_pred HHHHHHHHHCCcEEEeCCEec--------cE--EEhhH---------hHhhCCEEEEecCC-CCCCCCCCCCCcC-CC-c
Confidence 777888888999988887652 11 22232 12569999999994 2466677888653 22 2
Q ss_pred eeccC---------CCC--------CCCCCCCeEEEECCCCcHHHHHHHHhccCC-CcEEEEecCcceecccccCCcchh
Q 013943 191 RHTSL---------YKS--------GEDFRGKRVLVVGCGNSGMEVCLDLCNHDA-MPSLVVRDTVHVLPQEMLGKSTFG 252 (433)
Q Consensus 191 ~~~~~---------~~~--------~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~Vtl~~r~~~~~lp~~~~~~~~~~ 252 (433)
.+... +.. .....+++|+|||+|++|+|+|..+.+.|. +|++++|++...+|.... .
T Consensus 234 ~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~-----e 308 (456)
T 2vdc_G 234 VAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQR-----E 308 (456)
T ss_dssp EEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHH-----H
T ss_pred EEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHH-----H
Confidence 22110 101 123568999999999999999999999987 599999988433442210 0
Q ss_pred hhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC
Q 013943 253 LSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR 330 (433)
Q Consensus 253 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~ 330 (433)
.+.+++.+|+++.+ +.++.+
T Consensus 309 ----------------------------------------------------------~~~~~~~Gv~~~~~~~~~~i~~ 330 (456)
T 2vdc_G 309 ----------------------------------------------------------VAHAEEEGVEFIWQAAPEGFTG 330 (456)
T ss_dssp ----------------------------------------------------------HHHHHHTTCEEECCSSSCCEEE
T ss_pred ----------------------------------------------------------HHHHHHCCCEEEeCCCceEEeC
Confidence 01111223333322 222211
Q ss_pred Ce----------------------EEEcCC--cEecccEEEEccCCCCCCCC-ccccccccccCCCCcCCCCCCCCCCCC
Q 013943 331 YA----------------------VEFVNG--RCENFDAIILATGYRSNVPS-WLKESEMFSRKDGLPRRPFPNGWKGES 385 (433)
Q Consensus 331 ~~----------------------v~~~~g--~~~~~D~vi~atG~~~~~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~ 385 (433)
++ ....+| .++++|.||+|+|+.|+... ++.+.++..+++|++.+|...++|+.|
T Consensus 331 ~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~ 410 (456)
T 2vdc_G 331 DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMD 410 (456)
T ss_dssp EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSST
T ss_pred CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCC
Confidence 11 111123 46899999999999998733 677778877788999999444789999
Q ss_pred ceEEeeecccc---cccchhhHHHHHHHHHhhhcc
Q 013943 386 GLYSVGFTKRG---LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 386 ~iya~Gd~~~~---~~~a~~~g~~~a~~i~~~l~~ 417 (433)
+|||+||++.+ +..|+.+|+.+|.+|.+.|..
T Consensus 411 ~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 411 GVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp TEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999865 447999999999999998865
No 56
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.2e-31 Score=268.63 Aligned_cols=308 Identities=18% Similarity=0.151 Sum_probs=208.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCCccccc-ccCceeeecCCc----eeecCCCCCCCCC-CCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKER---GIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFPSEF-PTY 103 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~---g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~ 103 (433)
.|||+|||||++|+++|..|++. |++|+|||++. +||.|... +.+.-.+..... +..+....++... ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 37999999999999999999999 99999999998 88875431 111100000000 0001111110000 000
Q ss_pred CCHHH-----------HHHHHHHHHHHcCCcceecceEEEEEEeC--CCCeEEEEEeecCcCCCceeEEEEeCEEEEccC
Q 013943 104 PSKQQ-----------FVDYLEAYAKRFEIRPRFNETVSQAEYDA--TIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 104 ~~~~~-----------~~~~l~~~~~~~~l~~~~~~~v~~v~~~~--~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG 170 (433)
..... +...+.+++++.+++++.++ ++.++... +...+.|...++ +...+.||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g------~~~~~~~d~lviATG 153 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADG------STSEHEADVVLVATG 153 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTS------CEEEEEESEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCC------cEEEEEeCEEEEcCC
Confidence 12222 23334566777888887775 55554310 013455655443 114799999999999
Q ss_pred CCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcc
Q 013943 171 ENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKST 250 (433)
Q Consensus 171 ~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~ 250 (433)
++|..|+++|.+.. .+.+..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 154 --s~p~~p~i~g~~~~--~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~---- 223 (499)
T 1xdi_A 154 --ASPRILPSAQPDGE--RILTWRQLYD-LDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPYEDA---- 223 (499)
T ss_dssp --EEECCCGGGCCCSS--SEEEGGGGGG-CSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCCSSH----
T ss_pred --CCCCCCCCCCCCcC--cEEehhHhhh-hhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH----
Confidence 88888888887542 2344433332 22356899999999999999999999999999999988 55553221
Q ss_pred hhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEE
Q 013943 251 FGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRL 328 (433)
Q Consensus 251 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~ 328 (433)
. ....+.+.+++.+|+++.+ |.++
T Consensus 224 -------------~-----------------------------------------~~~~l~~~l~~~GV~i~~~~~V~~i 249 (499)
T 1xdi_A 224 -------------D-----------------------------------------AALVLEESFAERGVRLFKNARAASV 249 (499)
T ss_dssp -------------H-----------------------------------------HHHHHHHHHHHTTCEEETTCCEEEE
T ss_pred -------------H-----------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEE
Confidence 1 1111124455678888876 7777
Q ss_pred eCCe----EEEcCCcEecccEEEEccCCCCCCCCc--cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---ccc
Q 013943 329 KRYA----VEFVNGRCENFDAIILATGYRSNVPSW--LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLG 399 (433)
Q Consensus 329 ~~~~----v~~~~g~~~~~D~vi~atG~~~~~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~ 399 (433)
..++ +.+.+|+++++|.||+|+|+.|+. .+ +++.++..+++|++.+| +.++|+.|+|||+|||+.. ...
T Consensus 250 ~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~-~~l~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~ 327 (499)
T 1xdi_A 250 TRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT-SGLGLERVGIQLGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLASV 327 (499)
T ss_dssp EECSSSEEEEETTSCEEEESEEEECCCEEECC-SSSCTTTTTCCCBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCHHH
T ss_pred EEeCCEEEEEECCCcEEEcCEEEECCCCCcCC-CcCCchhcCceECCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHH
Confidence 5432 455678889999999999999998 45 56668877778999999 6788999999999999975 346
Q ss_pred chhhHHHHHHHHHhh
Q 013943 400 VAMDAKRIAQDIESC 414 (433)
Q Consensus 400 a~~~g~~~a~~i~~~ 414 (433)
|..+|+.+|++|.+.
T Consensus 328 A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 328 AAMQGRIAMYHALGE 342 (499)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999864
No 57
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.97 E-value=7.2e-32 Score=268.85 Aligned_cols=301 Identities=16% Similarity=0.154 Sum_probs=200.5
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc-cccCceeeecC----CceeecCCCCCCCCCCCCCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL-KTYDRLRLHLP----KQFCELPLMGFPSEFPTYPS 105 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 105 (433)
...|||+|||||++|+++|..|++.|++|+|||++ .+||.|.. .+++...+... ........+.++... ....
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~ 95 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCE-GKFN 95 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCC-CCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCC-CccC
Confidence 34699999999999999999999999999999977 67876543 11111100000 000011111111111 1123
Q ss_pred HHHHHHH-----------HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 106 KQQFVDY-----------LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 106 ~~~~~~~-----------l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
...+..+ +...++..++++..+. +..++ . ..+++.. ++ ..+.||+||+||| ++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~--~~~~v~~-~g--------~~~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--D--PKPTIEV-SG--------KKYTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--C--SSCEEEE-TT--------EEEECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--C--CeEEEEE-CC--------EEEEeeEEEEccC--CC
Confidence 3333332 3334445566665553 32222 1 2344553 33 6799999999999 88
Q ss_pred CccC---CccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcch
Q 013943 175 AVVP---EIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTF 251 (433)
Q Consensus 175 p~~p---~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~ 251 (433)
|..| +++|.+. ..+...+. .....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ ++++..+.
T Consensus 160 p~~p~~~~i~G~~~----~~~~~~~~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~----- 228 (478)
T 3dk9_A 160 PSTPHESQIPGASL----GITSDGFF-QLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFDS----- 228 (478)
T ss_dssp ECCCCTTTSTTGGG----SBCHHHHT-TCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH-----
T ss_pred CCCCCcCCCCCCce----eEchHHhh-chhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccCH-----
Confidence 8888 7887651 12222222 123347899999999999999999999999999999988 55553321
Q ss_pred hhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEe
Q 013943 252 GLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLK 329 (433)
Q Consensus 252 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~ 329 (433)
. ....+.+.+++.+|+++.+ +.++.
T Consensus 229 ------------~-----------------------------------------~~~~~~~~l~~~gv~i~~~~~v~~i~ 255 (478)
T 3dk9_A 229 ------------M-----------------------------------------ISTNCTEELENAGVEVLKFSQVKEVK 255 (478)
T ss_dssp ------------H-----------------------------------------HHHHHHHHHHHTTCEEETTEEEEEEE
T ss_pred ------------H-----------------------------------------HHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 0 1111224456678888887 66665
Q ss_pred C--Ce----EEEcC---C----cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeeccc
Q 013943 330 R--YA----VEFVN---G----RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR 395 (433)
Q Consensus 330 ~--~~----v~~~~---g----~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~ 395 (433)
. ++ +.+.+ + +++++|.||+|+|+.|+...+ ++..++..+++|++.+| +.++|+.|+|||+|||+.
T Consensus 256 ~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~ 334 (478)
T 3dk9_A 256 KTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDVCG 334 (478)
T ss_dssp ECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCC-TTCBCSSTTEEECGGGGC
T ss_pred EcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeC-CCcccCCCCEEEEEecCC
Confidence 3 23 45554 2 578999999999999998545 56668877789999999 678899999999999995
Q ss_pred c---cccchhhHHHHHHHHHhh
Q 013943 396 G---LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 396 ~---~~~a~~~g~~~a~~i~~~ 414 (433)
. +..|..+|+.+|++|.+.
T Consensus 335 ~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 335 KALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp SSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCccHhHHHHHHHHHHHHHcCC
Confidence 4 347899999999999865
No 58
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=7.3e-32 Score=267.81 Aligned_cols=300 Identities=16% Similarity=0.126 Sum_probs=201.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC----cee-ecCCCCCCCCCCCCCCH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK----QFC-ELPLMGFPSEFPTYPSK 106 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~ 106 (433)
.+||+|||||++|+++|..|++.|++|+|+|++ .+||.|... +.+...+.... .+. .+.....+.. .....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~--~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGE--VTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEEC--CEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCC--CccCH
Confidence 479999999999999999999999999999998 677765431 11110000000 000 0000000000 00111
Q ss_pred -----------HHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 107 -----------QQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 107 -----------~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
..+...+.+.+++.+++++.++.+. + +. ..+++.+.+| +...+.||+||+||| ++|
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~G------~~~~~~~d~lViAtG--~~~ 146 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DA--NTLLVDLNDG------GTESVTFDNAIIATG--SST 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SS--SEEEEEETTS------CCEEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CeEEEEeCCC------ceEEEEcCEEEECCC--CCC
Confidence 1223344566677788888776543 2 22 5666766543 125799999999999 778
Q ss_pred ccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhH
Q 013943 176 VVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSM 255 (433)
Q Consensus 176 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~ 255 (433)
..|+++|.+. .+.+..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 147 ~~~~~~g~~~---~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~--------- 212 (464)
T 2a8x_A 147 RLVPGTSLSA---NVVTYEEQIL-SRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDA--------- 212 (464)
T ss_dssp CCCTTCCCBT---TEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH---------
T ss_pred CCCCCCCCCc---eEEecHHHhh-ccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH---------
Confidence 8887777543 2333332222 22357899999999999999999999999999999988 56553221
Q ss_pred HHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC--
Q 013943 256 WLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-- 331 (433)
Q Consensus 256 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-- 331 (433)
... ..+.+.+++.+|+++.+ +.++..+
T Consensus 213 --------~~~-----------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~ 243 (464)
T 2a8x_A 213 --------DVS-----------------------------------------KEIEKQFKKLGVTILTATKVESIADGGS 243 (464)
T ss_dssp --------HHH-----------------------------------------HHHHHHHHHHTCEEECSCEEEEEEECSS
T ss_pred --------HHH-----------------------------------------HHHHHHHHHcCCEEEeCcEEEEEEEcCC
Confidence 111 11123345567888876 7777543
Q ss_pred e--EEEc-CC--cEecccEEEEccCCCCCCCCc--cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccch
Q 013943 332 A--VEFV-NG--RCENFDAIILATGYRSNVPSW--LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVA 401 (433)
Q Consensus 332 ~--v~~~-~g--~~~~~D~vi~atG~~~~~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~ 401 (433)
. +.+. +| +++++|.||+|+|+.|+. .+ +++.++..+++|++.+| ++++|+.|+|||+|||+.. ...|.
T Consensus 244 ~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~-~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~ 321 (464)
T 2a8x_A 244 QVTVTVTKDGVAQELKAEKVLQAIGFAPNV-EGYGLDKAGVALTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHVAE 321 (464)
T ss_dssp CEEEEEESSSCEEEEEESEEEECSCEEECC-SSSCHHHHTCCBCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHH
T ss_pred eEEEEEEcCCceEEEEcCEEEECCCCCccC-CCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHHHH
Confidence 2 3443 56 579999999999999998 45 45667777678999999 6788999999999999974 34689
Q ss_pred hhHHHHHHHHHh
Q 013943 402 MDAKRIAQDIES 413 (433)
Q Consensus 402 ~~g~~~a~~i~~ 413 (433)
.+|+.+|++|.+
T Consensus 322 ~~g~~aa~~i~g 333 (464)
T 2a8x_A 322 AQGVVAAETIAG 333 (464)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 59
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=3.1e-31 Score=264.60 Aligned_cols=306 Identities=15% Similarity=0.127 Sum_probs=202.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHH-cCCCEEEEe--------cCCCCCCcccc-cccCceeeecCCce----eecCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKE-RGIPSILLE--------RSNCIASLWQL-KTYDRLRLHLPKQF----CELPLMGFP 97 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~-~g~~v~iie--------~~~~~gg~w~~-~~~~~~~~~~~~~~----~~~~~~~~~ 97 (433)
..|||+|||||++|+++|..|++ .|++|+||| +...+||.|.. .++|...+.....+ .....+.+.
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999999 999999999 35678887643 12221000000000 000000000
Q ss_pred CCCC-CCCCHHHHH-----------HHHHHHHHHc-CCcceecceEEEEEEeCCCCeEEEEE---eecCcCCCceeEEEE
Q 013943 98 SEFP-TYPSKQQFV-----------DYLEAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKT---TVGGQKCGVEEMEYR 161 (433)
Q Consensus 98 ~~~~-~~~~~~~~~-----------~~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~---~~g~~~~~~~~~~~~ 161 (433)
.... .......+. ..+...+++. +++++.++ ++.++ . ..+.+.. .++ .....+.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~v~v~~~~~~~g-----~~~~~~~ 151 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD--N--HTVLVRESADPNS-----AVLETLD 151 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE--T--TEEEEESSSSTTS-----CEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee--C--CEEEEEeeccCCC-----CceEEEE
Confidence 0000 001222222 2333444556 77777664 55553 2 3443432 121 0015799
Q ss_pred eCEEEEccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhcc---CCCcEEEEecCc
Q 013943 162 CRWLVVATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNH---DAMPSLVVRDTV 238 (433)
Q Consensus 162 ~d~viiAtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~---g~~Vtl~~r~~~ 238 (433)
||+||+||| ++|..|+++|.+. ..+...... ....+++++|||+|.+|+|+|..|.+. |.+|+++.+.+
T Consensus 152 ~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~- 223 (490)
T 1fec_A 152 TEYILLATG--SWPQHLGIEGDDL----CITSNEAFY-LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD- 223 (490)
T ss_dssp EEEEEECCC--EEECCCCSBTGGG----CBCHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS-
T ss_pred cCEEEEeCC--CCCCCCCCCCccc----eecHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC-
Confidence 999999999 8888888887632 222222221 223578999999999999999999999 99999999998
Q ss_pred ceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCC
Q 013943 239 HVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGH 318 (433)
Q Consensus 239 ~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (433)
+++|..+. .. ...+.+.+++.+
T Consensus 224 ~~l~~~d~-----------------~~-----------------------------------------~~~l~~~l~~~G 245 (490)
T 1fec_A 224 MILRGFDS-----------------EL-----------------------------------------RKQLTEQLRANG 245 (490)
T ss_dssp SSSTTSCH-----------------HH-----------------------------------------HHHHHHHHHHTT
T ss_pred CcccccCH-----------------HH-----------------------------------------HHHHHHHHHhCC
Confidence 55553221 11 111124455678
Q ss_pred eEEecC--ceEEeCC-----eEEEcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEe
Q 013943 319 IRVFPG--IKRLKRY-----AVEFVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSV 390 (433)
Q Consensus 319 v~~~~~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~ 390 (433)
|+++.+ +.++..+ .+.+.+|+++++|.||+|+|+.|+...+ ++..++..+++|++.+| ++++|+.|+|||+
T Consensus 246 V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd-~~~~t~~~~IyA~ 324 (490)
T 1fec_A 246 INVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIYAI 324 (490)
T ss_dssp EEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEEC
T ss_pred CEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEEC-CCCccCCCCEEEE
Confidence 888876 7777532 3677888899999999999999998445 56668877778999999 6788999999999
Q ss_pred eecccc---cccchhhHHHHHHHHHhh
Q 013943 391 GFTKRG---LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 391 Gd~~~~---~~~a~~~g~~~a~~i~~~ 414 (433)
|||+.. +..|..+|+.+|++|.+.
T Consensus 325 GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 325 GDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp GGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred eccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 999974 346899999999999863
No 60
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=9.2e-32 Score=260.66 Aligned_cols=283 Identities=19% Similarity=0.230 Sum_probs=200.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
..+||+|||||++|+++|..|++.| .+|+++|++. |..|.....+. .+.......++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~-------------------~~~~~~~~~~~ 61 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLST-------------------GFSKNKDADGL 61 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGG-------------------TTTTTCCHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccH-------------------HHhCCCCHHHh
Confidence 4589999999999999999999998 4689999875 22332211100 01111233444
Q ss_pred HH-HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCC
Q 013943 110 VD-YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGG 188 (433)
Q Consensus 110 ~~-~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~ 188 (433)
.. ++.+++++.+++++.+++|+.++... . +|.+.+ ..+.||+||+||| ++|..|+++|... .
T Consensus 62 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~---------~~~~~d~lviAtG--~~p~~p~i~g~~~--~ 124 (384)
T 2v3a_A 62 AMAEPGAMAEQLNARILTHTRVTGIDPGH--Q--RIWIGE---------EEVRYRDLVLAWG--AEPIRVPVEGDAQ--D 124 (384)
T ss_dssp EEECHHHHHHHTTCEEECSCCCCEEEGGG--T--EEEETT---------EEEECSEEEECCC--EEECCCCCBSTTT--T
T ss_pred hccCHHHHHHhCCcEEEeCCEEEEEECCC--C--EEEECC---------cEEECCEEEEeCC--CCcCCCCCCCcCc--C
Confidence 32 45666678899988888898887654 3 355543 4799999999999 8888888888642 1
Q ss_pred ceeeccCCCCC-----CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 189 DIRHTSLYKSG-----EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 189 ~~~~~~~~~~~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
.+++.....+. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++... ++
T Consensus 125 ~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~----------------~~ 187 (384)
T 2v3a_A 125 ALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLL----------------HP 187 (384)
T ss_dssp CEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTS----------------CH
T ss_pred CEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhccc----------------CH
Confidence 23333222111 11247899999999999999999999999999999887 4444311 11
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--C--eEEEcC
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--Y--AVEFVN 337 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~--~v~~~~ 337 (433)
.. ...+.+.+++.+|+++.+ +.++.. + .+.+.+
T Consensus 188 ~~-----------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 226 (384)
T 2v3a_A 188 AA-----------------------------------------AKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSD 226 (384)
T ss_dssp HH-----------------------------------------HHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETT
T ss_pred HH-----------------------------------------HHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECC
Confidence 11 111123455567888765 666653 2 367788
Q ss_pred CcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccc--c-----cccchhhHHHHHHH
Q 013943 338 GRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKR--G-----LLGVAMDAKRIAQD 410 (433)
Q Consensus 338 g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~--~-----~~~a~~~g~~~a~~ 410 (433)
|+++++|.||+|+|+.|+. .++++.++..+ +| +.+| +.++|+.|+|||+|||+. + +..|..+|+.+|++
T Consensus 227 g~~i~~d~vv~a~G~~p~~-~l~~~~g~~~~-~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~ 302 (384)
T 2v3a_A 227 GEVIPCDLVVSAVGLRPRT-ELAFAAGLAVN-RG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQT 302 (384)
T ss_dssp SCEEEESEEEECSCEEECC-HHHHHTTCCBS-SS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHH
T ss_pred CCEEECCEEEECcCCCcCH-HHHHHCCCCCC-CC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHH
Confidence 9899999999999999998 57777788774 67 8888 567899999999999984 2 22468899999999
Q ss_pred HHhh
Q 013943 411 IESC 414 (433)
Q Consensus 411 i~~~ 414 (433)
|.+.
T Consensus 303 i~g~ 306 (384)
T 2v3a_A 303 LAGN 306 (384)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 9863
No 61
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=3.1e-31 Score=263.01 Aligned_cols=298 Identities=17% Similarity=0.195 Sum_probs=198.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCc----eeecCCCCCCC----CCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFPS----EFPTY 103 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~ 103 (433)
.+||+|||||++|+++|..|++.|++|+|||++. +||.|... +.+...+..... +..+..+.++. ++..+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 4899999999999999999999999999999987 88876432 111100000000 00000000000 00000
Q ss_pred C-CHHHHHHH----HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 104 P-SKQQFVDY----LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 104 ~-~~~~~~~~----l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
. ...++.++ +..++++.+++++.++.+ .+ +. .. +.+. + ..+.||+||+||| ++|..|
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~--~~--v~v~-g--------~~~~~d~lViATG--s~p~~p 146 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFAR-LV--GP--KE--VEVG-G--------ERYGAKSLILATG--SEPLEL 146 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-EE--ET--TE--EEET-T--------EEEEEEEEEECCC--EEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEE-Ec--cC--CE--EEEc-c--------EEEEeCEEEEcCC--CCCCCC
Confidence 0 11222222 344556678888777543 23 22 33 4443 4 6899999999999 788877
Q ss_pred C-ccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHH
Q 013943 179 E-IEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWL 257 (433)
Q Consensus 179 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~ 257 (433)
+ +++.. .+++..+........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ +++|..+.
T Consensus 147 ~gi~~~~----~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----------- 210 (464)
T 2eq6_A 147 KGFPFGE----DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDP----------- 210 (464)
T ss_dssp TTBCCSS----SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH-----------
T ss_pred CCCCCCC----cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----------
Confidence 5 66521 2344333333222257899999999999999999999999999999987 55553221
Q ss_pred HhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC--e-
Q 013943 258 LKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY--A- 332 (433)
Q Consensus 258 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~- 332 (433)
. +...+.+.+++.+|+++.+ +.+++.+ .
T Consensus 211 ------~-----------------------------------------~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~ 243 (464)
T 2eq6_A 211 ------E-----------------------------------------TAALLRRALEKEGIRVRTKTKAVGYEKKKDGL 243 (464)
T ss_dssp ------H-----------------------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTEE
T ss_pred ------H-----------------------------------------HHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEE
Confidence 0 1111123455678888876 6666532 2
Q ss_pred -EEEc-C--Cc--EecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchh
Q 013943 333 -VEFV-N--GR--CENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAM 402 (433)
Q Consensus 333 -v~~~-~--g~--~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~ 402 (433)
+.+. + |+ ++++|.||+|+|+.|+...+ ++..++..+++|++.+| +.++|+.|+|||+|||+.. ...|..
T Consensus 244 ~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~~~A~~ 322 (464)
T 2eq6_A 244 HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVN-ARMETSVPGVYAIGDAARPPLLAHKAMR 322 (464)
T ss_dssp EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCHHHHHH
T ss_pred EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHH
Confidence 5555 6 76 79999999999999998433 35557776678999999 6788999999999999964 346899
Q ss_pred hHHHHHHHHHh
Q 013943 403 DAKRIAQDIES 413 (433)
Q Consensus 403 ~g~~~a~~i~~ 413 (433)
+|+.+|++|.+
T Consensus 323 ~g~~aa~~i~g 333 (464)
T 2eq6_A 323 EGLIAAENAAG 333 (464)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999986
No 62
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.97 E-value=1.2e-32 Score=268.68 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=199.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGI--PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
+||+|||||++|+++|..|++.|+ +|+|||+++.++. ... . .++.+..... .+ .++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y--~~~-----~--l~~~~l~~~~--~~---------~~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY--QRP-----P--LSKAYLKSGG--DP---------NSLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB--CSG-----G--GGTGGGGSCC--CT---------TSSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC--CCc-----c--CCHHHHCCCC--CH---------HHccC
Confidence 689999999999999999999998 8999999985431 110 0 0000000000 00 00111
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
+..+++.+.+++++. ++|+.++... . ++.+.++ ..+.||+||+||| ++|..|++||.+.. + +.
T Consensus 62 ~~~~~~~~~~i~~~~-~~v~~id~~~--~--~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~i~g~~~~-~-v~ 124 (404)
T 3fg2_P 62 RPEKFFQDQAIELIS-DRMVSIDREG--R--KLLLASG--------TAIEYGHLVLATG--ARNRMLDVPNASLP-D-VL 124 (404)
T ss_dssp SCHHHHHHTTEEEEC-CCEEEEETTT--T--EEEESSS--------CEEECSEEEECCC--EEECCCCSTTTTST-T-EE
T ss_pred CCHHHHHhCCCEEEE-EEEEEEECCC--C--EEEECCC--------CEEECCEEEEeeC--CCccCCCCCCCCCC-c-EE
Confidence 122344556888887 8999998755 3 3677765 6899999999999 78888888886531 1 22
Q ss_pred eccCC-----CCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHH
Q 013943 192 HTSLY-----KSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLV 266 (433)
Q Consensus 192 ~~~~~-----~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~ 266 (433)
..... .......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++++.. ++.
T Consensus 125 ~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~~~----------------~~~-- 185 (404)
T 3fg2_P 125 YLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMARVV----------------TPE-- 185 (404)
T ss_dssp CCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTS----------------CHH--
T ss_pred EECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhhcc----------------CHH--
Confidence 11111 11112357899999999999999999999999999999887 3333211 111
Q ss_pred HHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-----eEEEcCCc
Q 013943 267 DKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-----AVEFVNGR 339 (433)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-----~v~~~~g~ 339 (433)
....+.+.+++.+|+++.+ |.++..+ ++.+.+|+
T Consensus 186 ---------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~ 226 (404)
T 3fg2_P 186 ---------------------------------------ISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGN 226 (404)
T ss_dssp ---------------------------------------HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSC
T ss_pred ---------------------------------------HHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCC
Confidence 1111234456678888876 7777543 47889999
Q ss_pred EecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------------cccchhhHHH
Q 013943 340 CENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------------LLGVAMDAKR 406 (433)
Q Consensus 340 ~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------------~~~a~~~g~~ 406 (433)
++++|.||+|+|+.|+. .++++.++.. ++| +.+| +.++++.|+|||+|||+.. +..|..+|+.
T Consensus 227 ~i~aD~Vv~a~G~~p~~-~l~~~~gl~~-~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~ 302 (404)
T 3fg2_P 227 TLPCDLVVVGVGVIPNV-EIAAAAGLPT-AAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARC 302 (404)
T ss_dssp EEECSEEEECCCEEECC-HHHHHTTCCB-SSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHH
T ss_pred EEEcCEEEECcCCccCH-HHHHhCCCCC-CCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHH
Confidence 99999999999999998 6888888876 456 7888 6778999999999999853 2368899999
Q ss_pred HHHHHHhh
Q 013943 407 IAQDIESC 414 (433)
Q Consensus 407 ~a~~i~~~ 414 (433)
+|.+|.+.
T Consensus 303 aa~~i~g~ 310 (404)
T 3fg2_P 303 VAARLTGD 310 (404)
T ss_dssp HHHHTTTC
T ss_pred HHHHhCCC
Confidence 99999865
No 63
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=3.4e-32 Score=269.30 Aligned_cols=291 Identities=15% Similarity=0.187 Sum_probs=200.6
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
+||+|||||++|+++|..|++. |.+|+|+|+++.++..... +........ .. ....++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-----~~~~~~g~~---~~----------~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG-----IALYLGKEI---KN----------NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG-----HHHHHTTCB---GG----------GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc-----chhhhcCCc---cc----------CCHHHhhh
Confidence 5899999999999999999998 9999999998755421100 000000000 00 00111111
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
.+.+.+.+.+++++++++|+.++.++ +.+.+...+ +++...+.||+||+||| ++|..|+++|.+.. .++
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~~-----~g~~~~~~~d~lviAtG--s~p~~p~i~g~~~~--~v~ 131 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET--KTIKVKDLI-----TNEEKTEAYDKLIMTTG--SKPTVPPIPGIDSS--RVY 131 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG--TEEEEEETT-----TCCEEEEECSEEEECCC--EEECCCCCTTTTST--TEE
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC--CEEEEEecC-----CCceEEEECCEEEEccC--CCcCCCCCCCCCCC--CEE
Confidence 22334556789988999999998765 455554311 11126799999999999 88999988887531 233
Q ss_pred eccCCCCC-----CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHH
Q 013943 192 HTSLYKSG-----EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLV 266 (433)
Q Consensus 192 ~~~~~~~~-----~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~ 266 (433)
+...+.+. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++... ++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~----------------~~~~- 193 (452)
T 2cdu_A 132 LCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYF----------------DKEF- 193 (452)
T ss_dssp ECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTS----------------CHHH-
T ss_pred EeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhh----------------hhhH-
Confidence 33222111 12357899999999999999999999999999999988 4444211 1111
Q ss_pred HHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--CeE--EEcCCcE
Q 013943 267 DKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--YAV--EFVNGRC 340 (433)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~v--~~~~g~~ 340 (433)
...+.+.+++.+|+++.+ +.++.. +.+ ...+|++
T Consensus 194 ----------------------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~ 233 (452)
T 2cdu_A 194 ----------------------------------------TDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKE 233 (452)
T ss_dssp ----------------------------------------HHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCE
T ss_pred ----------------------------------------HHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCE
Confidence 111224456678888876 777754 333 2347888
Q ss_pred ecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------------cccchhhHHHH
Q 013943 341 ENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------------LLGVAMDAKRI 407 (433)
Q Consensus 341 ~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------------~~~a~~~g~~~ 407 (433)
+++|.||+|+|+.|+. .++++. +..+++|++.+| ++++|+.|+|||+|||+.. +..|..+|+.+
T Consensus 234 i~~D~vv~a~G~~p~~-~ll~~~-l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~a 310 (452)
T 2cdu_A 234 IKSDIAILCIGFRPNT-ELLKGK-VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLV 310 (452)
T ss_dssp EEESEEEECCCEEECC-GGGTTT-SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHH
T ss_pred EECCEEEECcCCCCCH-HHHHHh-hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHH
Confidence 9999999999999998 577666 666678999999 6788999999999999962 34689999999
Q ss_pred HHHHHhh
Q 013943 408 AQDIESC 414 (433)
Q Consensus 408 a~~i~~~ 414 (433)
|++|.+.
T Consensus 311 a~~i~g~ 317 (452)
T 2cdu_A 311 GLNLTED 317 (452)
T ss_dssp HHTSSSC
T ss_pred HHHhCCC
Confidence 9999753
No 64
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.3e-31 Score=265.83 Aligned_cols=297 Identities=13% Similarity=0.105 Sum_probs=200.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc-cccCceeeec----CCceeecCCCCCCCCCCCCCCH-
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL-KTYDRLRLHL----PKQFCELPLMGFPSEFPTYPSK- 106 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~- 106 (433)
.|||+|||||++|+++|..|++.|++|+|||+ ..+||.|.. .+.+...+.. ......+..+.+....+ ....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 58999999999999999999999999999999 678887643 1111100000 00000000000000000 0111
Q ss_pred ----------HHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEE-eecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 107 ----------QQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKT-TVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 107 ----------~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~-~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
..+..++..++.+.++++..+ ++..++ . . ++.+ .++ ..+.||+||+||| ++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~--~--~v~~~~~~--------~~~~~d~lviAtG--~~p 145 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--P--N--TVKLLASG--------KTVTAERIVIAVG--GHP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--S--S--EEEETTTT--------EEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--C--C--EEEEecCC--------eEEEeCEEEEecC--CCc
Confidence 223334445556667776665 343331 1 2 3555 233 6899999999999 788
Q ss_pred c-cCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhh
Q 013943 176 V-VPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLS 254 (433)
Q Consensus 176 ~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~ 254 (433)
. .|+++|.+. ..+..... .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+.
T Consensus 146 ~~~p~i~G~~~----~~~~~~~~-~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~-------- 211 (463)
T 4dna_A 146 SPHDALPGHEL----CITSNEAF-DLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ-------- 211 (463)
T ss_dssp CCCTTSTTGGG----CBCHHHHT-TCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH--------
T ss_pred ccCCCCCCccc----cccHHHHh-hhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH--------
Confidence 8 888888652 12221211 223457899999999999999999999999999999888 44443221
Q ss_pred HHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-
Q 013943 255 MWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY- 331 (433)
Q Consensus 255 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~- 331 (433)
. ....+.+.+++.+|+++.+ +.++..+
T Consensus 212 ---------~-----------------------------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~ 241 (463)
T 4dna_A 212 ---------D-----------------------------------------MRRGLHAAMEEKGIRILCEDIIQSVSADA 241 (463)
T ss_dssp ---------H-----------------------------------------HHHHHHHHHHHTTCEEECSCCEEEEEECT
T ss_pred ---------H-----------------------------------------HHHHHHHHHHHCCCEEECCCEEEEEEEcC
Confidence 1 1111224466678888876 7777543
Q ss_pred ----eEE-EcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchh
Q 013943 332 ----AVE-FVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAM 402 (433)
Q Consensus 332 ----~v~-~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~ 402 (433)
.+. +.+|+ +++|.||+|+|+.|+...+ ++..++..+++|++.+| +.++|+.|+|||+|||+.. ...|..
T Consensus 242 ~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~ 319 (463)
T 4dna_A 242 DGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVAIH 319 (463)
T ss_dssp TSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHHHH
T ss_pred CCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHHHH
Confidence 366 77887 9999999999999998433 56668877788999999 6778999999999999974 336899
Q ss_pred hHHHHHHHHHhh
Q 013943 403 DAKRIAQDIESC 414 (433)
Q Consensus 403 ~g~~~a~~i~~~ 414 (433)
+|+.+|++|.+.
T Consensus 320 ~g~~aa~~i~g~ 331 (463)
T 4dna_A 320 EAMCFIETEYKN 331 (463)
T ss_dssp HHHHHHHHHHSS
T ss_pred HHHHHHHHHcCC
Confidence 999999999864
No 65
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=4e-31 Score=263.40 Aligned_cols=306 Identities=16% Similarity=0.157 Sum_probs=199.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC------CCccccc-ccCceeeecCCce-ee----cCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI------ASLWQLK-TYDRLRLHLPKQF-CE----LPLMGFPSE 99 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~------gg~w~~~-~~~~~~~~~~~~~-~~----~~~~~~~~~ 99 (433)
..|||+|||||++|+++|..|++.|++|+|||++..+ ||.|... +.+...+...... .. +..+.+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4699999999999999999999999999999999744 4443221 1111000000000 00 000000000
Q ss_pred CCCCCCHHHH-----------HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEc
Q 013943 100 FPTYPSKQQF-----------VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVA 168 (433)
Q Consensus 100 ~~~~~~~~~~-----------~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiA 168 (433)
........+ ...+..+.++.++++..+..+ . .+. ..+.+...++ +...+.||+||+|
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~--~~~--~~~~v~~~~g------~~~~~~~d~lvlA 149 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGK-L--LAG--KKVEVTAADG------SSQVLDTENVILA 149 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEE-E--CST--TCEEEECTTS------CEEEECCSCEEEC
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-E--ecC--CEEEEEcCCC------ceEEEEcCEEEEc
Confidence 000112222 222334455667776666432 2 122 4555654432 2368999999999
Q ss_pred cCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCC
Q 013943 169 TGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGK 248 (433)
Q Consensus 169 tG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~ 248 (433)
|| ++|..|+.++... ..+.++.... .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 150 tG--~~p~~~~~~~~~~--~~v~~~~~~~-~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~-- 221 (476)
T 3lad_A 150 SG--SKPVEIPPAPVDQ--DVIVDSTGAL-DFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFLPAVDE-- 221 (476)
T ss_dssp CC--EEECCCTTSCCCS--SSEEEHHHHT-SCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH--
T ss_pred CC--CCCCCCCCCCCCc--ccEEechhhh-ccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCcccCH--
Confidence 99 7777665444221 2234433322 233467899999999999999999999999999999988 55553221
Q ss_pred cchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ce
Q 013943 249 STFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IK 326 (433)
Q Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~ 326 (433)
. ....+.+.+++.+|+++.+ +.
T Consensus 222 ---------------~-----------------------------------------~~~~l~~~l~~~Gv~v~~~~~v~ 245 (476)
T 3lad_A 222 ---------------Q-----------------------------------------VAKEAQKILTKQGLKILLGARVT 245 (476)
T ss_dssp ---------------H-----------------------------------------HHHHHHHHHHHTTEEEEETCEEE
T ss_pred ---------------H-----------------------------------------HHHHHHHHHHhCCCEEEECCEEE
Confidence 1 1111224466678998876 77
Q ss_pred EEeCC--e--EEEcCC---cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc--
Q 013943 327 RLKRY--A--VEFVNG---RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-- 396 (433)
Q Consensus 327 ~~~~~--~--v~~~~g---~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-- 396 (433)
++..+ . +.+.++ +++++|.||+|+|+.|+...+ ++..++..+++|++.+| +.++|+.|+|||+|||+..
T Consensus 246 ~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~ 324 (476)
T 3lad_A 246 GTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD-DYCATSVPGVYAIGDVVRGAM 324 (476)
T ss_dssp EEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCC
T ss_pred EEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC-CCcccCCCCEEEEEccCCCcc
Confidence 77532 2 556654 579999999999999998544 56668877788999999 6788999999999999964
Q ss_pred -cccchhhHHHHHHHHHhh
Q 013943 397 -LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 -~~~a~~~g~~~a~~i~~~ 414 (433)
...|..+|+.+|++|.+.
T Consensus 325 ~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 325 LAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHhcCC
Confidence 347899999999999864
No 66
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.97 E-value=1.1e-31 Score=267.84 Aligned_cols=304 Identities=16% Similarity=0.119 Sum_probs=195.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc-cccCceeeecCC----ceeecCCCCCCCCCCCCCCHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL-KTYDRLRLHLPK----QFCELPLMGFPSEFPTYPSKQ 107 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 107 (433)
.|||+|||||++|+++|..|++.|++|+|||++. +||.|.. .++|.-.+.... ....++.+.++.. .......
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4899999999999999999999999999999975 8876532 122211100000 0000011110000 0112445
Q ss_pred HHHHHHHHHHHHcCCcc------eecceEEE--EEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCC
Q 013943 108 QFVDYLEAYAKRFEIRP------RFNETVSQ--AEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPE 179 (433)
Q Consensus 108 ~~~~~l~~~~~~~~l~~------~~~~~v~~--v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~ 179 (433)
++.+++.+...+....+ .....+.. ....+ .++|.+.++ ..+.||+||+||| ++|..|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~---~~~v~~~~~--------~~~~~d~lViATG--s~p~~p~ 152 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD---EHTLQVDDH--------SQVIAKRIVIATG--SRPNYPE 152 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE---TTEEEETTT--------EEEEEEEEEECCC--EECCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec---CCEEEEcCC--------cEEEeCEEEEccC--CCCcCCC
Confidence 55555544433321111 00111100 00111 123666554 7899999999999 8898887
Q ss_pred ccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHh
Q 013943 180 IEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLK 259 (433)
Q Consensus 180 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~ 259 (433)
+++... .. ++++.........+++++|||+|.+|+|+|..|++.|.+|+++.|.+ ++++..+.
T Consensus 153 ~~~~~~--~~-v~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~------------- 215 (492)
T 3ic9_A 153 FLAAAG--SR-LLTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDE------------- 215 (492)
T ss_dssp HHHTTG--GG-EECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCH-------------
T ss_pred CCCccC--Cc-EEcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCH-------------
Confidence 665321 12 33332222234458899999999999999999999999999999998 45543221
Q ss_pred hcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--Ce--E
Q 013943 260 WLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--YA--V 333 (433)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~--v 333 (433)
... ..+.+.+++. |+++.+ +.++.. ++ +
T Consensus 216 ----~~~-----------------------------------------~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v 249 (492)
T 3ic9_A 216 ----EMK-----------------------------------------RYAEKTFNEE-FYFDAKARVISTIEKEDAVEV 249 (492)
T ss_dssp ----HHH-----------------------------------------HHHHHHHHTT-SEEETTCEEEEEEECSSSEEE
T ss_pred ----HHH-----------------------------------------HHHHHHHhhC-cEEEECCEEEEEEEcCCEEEE
Confidence 111 1112334445 777766 666643 23 4
Q ss_pred EEc--CC--cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchhhHH
Q 013943 334 EFV--NG--RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAMDAK 405 (433)
Q Consensus 334 ~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~~g~ 405 (433)
.+. +| +++++|.||+|+|+.|+...+ ++..++..+++|++.+|.+.++|+.|+|||+|||+.. ...|..+|+
T Consensus 250 ~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~ 329 (492)
T 3ic9_A 250 IYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGK 329 (492)
T ss_dssp EEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHH
T ss_pred EEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHH
Confidence 443 67 679999999999999998432 5666887778999998855788999999999999975 337899999
Q ss_pred HHHHHHHhh
Q 013943 406 RIAQDIESC 414 (433)
Q Consensus 406 ~~a~~i~~~ 414 (433)
.+|.+|.+.
T Consensus 330 ~aa~~i~~~ 338 (492)
T 3ic9_A 330 VAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHcCC
Confidence 999999874
No 67
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.97 E-value=2.6e-31 Score=265.05 Aligned_cols=299 Identities=16% Similarity=0.129 Sum_probs=200.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecC----CceeecCCCCCCCCCCCCCCH-
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLP----KQFCELPLMGFPSEFPTYPSK- 106 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~- 106 (433)
.|||+|||||++|+++|..|++.|++|+|||+ ..+||.|... +++...+... ..+..+..+.+....+ ....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 48999999999999999999999999999999 5788876431 1111000000 0000000111000000 0111
Q ss_pred ----------HHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEe-ecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 107 ----------QQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTT-VGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 107 ----------~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~-~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
..+..++...+.+.++++..+ .+..++ . .. +.+. ++ ..+.||+||+||| ++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~--~~--v~v~~~~--------~~~~~d~lviAtG--~~p 166 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--E--HT--LELSVTG--------ERISAEKILIATG--AKI 166 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--T--TE--EEETTTC--------CEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--C--CE--EEEecCC--------eEEEeCEEEEccC--CCc
Confidence 233344445566677776655 444443 2 23 4443 33 6899999999999 778
Q ss_pred c-cCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhh
Q 013943 176 V-VPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLS 254 (433)
Q Consensus 176 ~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~ 254 (433)
. .|+++|.+. ..+..... .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+.
T Consensus 167 ~~~p~i~G~~~----~~~~~~~~-~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~-------- 232 (484)
T 3o0h_A 167 VSNSAIKGSDL----CLTSNEIF-DLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY-------- 232 (484)
T ss_dssp CCC--CBTGGG----SBCTTTGG-GCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH--------
T ss_pred ccCCCCCCccc----cccHHHHH-hHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH--------
Confidence 8 888888652 12222222 223457899999999999999999999999999999888 44443221
Q ss_pred HHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-
Q 013943 255 MWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY- 331 (433)
Q Consensus 255 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~- 331 (433)
.. ...+.+.+++.+|+++.+ |.++..+
T Consensus 233 ---------~~-----------------------------------------~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 262 (484)
T 3o0h_A 233 ---------DL-----------------------------------------RQLLNDAMVAKGISIIYEATVSQVQSTE 262 (484)
T ss_dssp ---------HH-----------------------------------------HHHHHHHHHHHTCEEESSCCEEEEEECS
T ss_pred ---------HH-----------------------------------------HHHHHHHHHHCCCEEEeCCEEEEEEeeC
Confidence 11 111123455567888875 7777644
Q ss_pred ---eEEEcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchhhH
Q 013943 332 ---AVEFVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAMDA 404 (433)
Q Consensus 332 ---~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~~g 404 (433)
.+.+.+|+++++|.||+|+|+.|+...+ +...++..+++|++.+| +.++++.|+|||+|||+.. ...|..+|
T Consensus 263 ~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g 341 (484)
T 3o0h_A 263 NCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDA 341 (484)
T ss_dssp SSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHH
Confidence 4778889899999999999999998433 45568877788999999 6788999999999999974 33789999
Q ss_pred HHHHHHHHhhh
Q 013943 405 KRIAQDIESCW 415 (433)
Q Consensus 405 ~~~a~~i~~~l 415 (433)
+.+|++|.+.-
T Consensus 342 ~~aa~~i~~~~ 352 (484)
T 3o0h_A 342 MCFVKNAFENT 352 (484)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHcCCC
Confidence 99999998753
No 68
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=6.4e-32 Score=269.06 Aligned_cols=289 Identities=15% Similarity=0.238 Sum_probs=198.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
|+||+|||||++|+++|..|++. |.+|+|||+++.++..... +.... .. . .....++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-----~~~~~-------~~-~-------~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-----LPYVI-------SG-A-------IASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-----HHHHH-------TT-S-------SSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-----cchhh-------cC-C-------cCCHHHhh
Confidence 67999999999999999999997 8899999998865421110 00000 00 0 00111111
Q ss_pred HH-HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEE-eecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCC
Q 013943 111 DY-LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKT-TVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGG 188 (433)
Q Consensus 111 ~~-l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~-~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~ 188 (433)
.+ ...+.+..+++++++++|+.++.++ +.+.+.. .++ +..++.||+||+||| ++|..|+++|.+. .+
T Consensus 96 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~v~~~~~g------~~~~~~~d~lviAtG--~~p~~p~i~G~~~-~~ 164 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDAKVRHEVTKVDTEK--KIVYAEHTKTK------DVFEFSYDRLLIATG--VRPVMPEWEGRDL-QG 164 (480)
T ss_dssp SSCHHHHHHTTCCEEESSEEEEEEETTT--TEEEEEETTTC------CEEEEECSEEEECCC--EEECCCCCBTTTS-BT
T ss_pred hcCHHHHHhhcCCEEEeCCEEEEEECCC--CEEEEEEcCCC------ceEEEEcCEEEECCC--CcccCCCCCCccC-CC
Confidence 11 2223344588989999999998765 5555543 222 124799999999999 8889998888753 11
Q ss_pred ceeeccCCCCCC-------CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhc
Q 013943 189 DIRHTSLYKSGE-------DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWL 261 (433)
Q Consensus 189 ~~~~~~~~~~~~-------~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l 261 (433)
+++.....+.. ...+++++|||+|++|+|+|..|.+.|.+|+++.+.+ .+++..+
T Consensus 165 -v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~---------------- 226 (480)
T 3cgb_A 165 -VHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYD---------------- 226 (480)
T ss_dssp -EECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSC----------------
T ss_pred -EEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCC----------------
Confidence 23222111110 1268899999999999999999999999999999887 4444211
Q ss_pred chHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe-E--EEc
Q 013943 262 PMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA-V--EFV 336 (433)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~-v--~~~ 336 (433)
+...+ .+.+.+++.+|+++.+ +.++..++ + ...
T Consensus 227 -~~~~~-----------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~ 264 (480)
T 3cgb_A 227 -GDMAE-----------------------------------------YIYKEADKHHIEILTNENVKAFKGNERVEAVET 264 (480)
T ss_dssp -HHHHH-----------------------------------------HHHHHHHHTTCEEECSCCEEEEEESSBEEEEEE
T ss_pred -HHHHH-----------------------------------------HHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE
Confidence 11111 1123455567888765 66665432 2 223
Q ss_pred CCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------------cccchhh
Q 013943 337 NGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------------LLGVAMD 403 (433)
Q Consensus 337 ~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------------~~~a~~~ 403 (433)
++.++++|.||+|+|+.|+. .+++..++..+++|++.+| ++++|+.|+|||+|||+.. +..|..+
T Consensus 265 ~~~~i~~D~vi~a~G~~p~~-~~l~~~g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~q 342 (480)
T 3cgb_A 265 DKGTYKADLVLVSVGVKPNT-DFLEGTNIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQ 342 (480)
T ss_dssp TTEEEECSEEEECSCEEESC-GGGTTSCCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHH
T ss_pred CCCEEEcCEEEECcCCCcCh-HHHHhCCcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHH
Confidence 45679999999999999998 5788778877778999999 6788999999999999832 3468999
Q ss_pred HHHHHHHHHhh
Q 013943 404 AKRIAQDIESC 414 (433)
Q Consensus 404 g~~~a~~i~~~ 414 (433)
|+.+|++|.+.
T Consensus 343 g~~aa~~i~g~ 353 (480)
T 3cgb_A 343 GRLAGLNMLDK 353 (480)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 99999999863
No 69
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=9.4e-31 Score=260.05 Aligned_cols=303 Identities=17% Similarity=0.167 Sum_probs=200.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC-ce---eecCCC-CCCCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK-QF---CELPLM-GFPSEFPTYPS 105 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~-~~---~~~~~~-~~~~~~~~~~~ 105 (433)
..+||+|||||++|+++|..|++.|++|+|||++ .+||.|... +++...+.... .. ...+.+ ..+.. .....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 80 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTID 80 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccC
Confidence 4689999999999999999999999999999998 788887642 11110000000 00 001111 00000 01112
Q ss_pred HHHHH-------HHHH-----HHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCC
Q 013943 106 KQQFV-------DYLE-----AYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 106 ~~~~~-------~~l~-----~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~ 172 (433)
...+. +++. +++++. +++++.+ ++..++ . ..+++.+.+| +...+.||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~--~--~~~~v~~~~g------~~~~~~~d~lviAtG-- 147 (467)
T 1zk7_A 81 RSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD--D--QSLTVRLNEG------GERVVMFDRCLVATG-- 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE--T--TEEEEEETTS------SEEEEECSEEEECCC--
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc--C--CEEEEEeCCC------ceEEEEeCEEEEeCC--
Confidence 22222 2222 233334 5665555 354443 2 4566666442 135799999999999
Q ss_pred CCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchh
Q 013943 173 AEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFG 252 (433)
Q Consensus 173 ~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~ 252 (433)
++|..|+++|.+... .++..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++| .+.
T Consensus 148 s~p~~p~i~G~~~~~--~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~------ 216 (467)
T 1zk7_A 148 ASPAVPPIPGLKESP--YWTSTEALA-SDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-EDP------ 216 (467)
T ss_dssp EEECCCCCTTTTTSC--CBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SCH------
T ss_pred CCCCCCCCCCCCcCc--eecHHHHhc-ccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CCH------
Confidence 889999998875421 222222221 12347899999999999999999999999999999988 5554 211
Q ss_pred hhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC
Q 013943 253 LSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR 330 (433)
Q Consensus 253 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~ 330 (433)
.. ...+.+.+++.+|+++.+ +.++..
T Consensus 217 -----------~~-----------------------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~ 244 (467)
T 1zk7_A 217 -----------AI-----------------------------------------GEAVTAAFRAEGIEVLEHTQASQVAH 244 (467)
T ss_dssp -----------HH-----------------------------------------HHHHHHHHHHTTCEEETTCCEEEEEE
T ss_pred -----------HH-----------------------------------------HHHHHHHHHhCCCEEEcCCEEEEEEE
Confidence 11 111124455667888876 666653
Q ss_pred --Ce--EEEcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccchh
Q 013943 331 --YA--VEFVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVAM 402 (433)
Q Consensus 331 --~~--v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~~ 402 (433)
.. +.+. +.++++|.||+|+|+.|+...+ +...++..+++|++.+| +.++++.|+|||+|||+.. +..|..
T Consensus 245 ~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~ 322 (467)
T 1zk7_A 245 MDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVAAA 322 (467)
T ss_dssp ETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHHHH
T ss_pred eCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHH
Confidence 22 3444 5679999999999999998433 45667777678999998 6788999999999999975 347899
Q ss_pred hHHHHHHHHHhh
Q 013943 403 DAKRIAQDIESC 414 (433)
Q Consensus 403 ~g~~~a~~i~~~ 414 (433)
+|+.+|.+|.+.
T Consensus 323 ~g~~aa~~i~~~ 334 (467)
T 1zk7_A 323 AGTRAAINMTGG 334 (467)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999999864
No 70
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=1.1e-30 Score=258.76 Aligned_cols=301 Identities=18% Similarity=0.184 Sum_probs=199.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCCcee-ec--CCCCCCCCCCCCCCHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPKQFC-EL--PLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 109 (433)
|||+|||||++|+++|..|++.|++|+|||+++.+||.|... +.+...+....... .+ ..+.++... .......+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~ 80 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKG-VELDLPAL 80 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECC-EEECHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCC-CccCHHHH
Confidence 789999999999999999999999999999998899886541 11110000000000 00 000000000 00112222
Q ss_pred -----------HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 110 -----------VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 110 -----------~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
...+.+++++.+++++.++.+ .+ +. ..+++.+ ++ ..+.||+||+||| ++|..|
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~--~~~~v~~-~g--------~~~~~d~lviAtG--~~p~~~ 144 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FL--SE--RKVLVEE-TG--------EELEARYILIATG--SAPLIP 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ES--SS--SEEEETT-TC--------CEEEEEEEEECCC--EEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cC--CeEEEee-CC--------EEEEecEEEECCC--CCCCCC
Confidence 222345566678887777543 21 22 4555543 33 5789999999999 788888
Q ss_pred CccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHH
Q 013943 179 EIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLL 258 (433)
Q Consensus 179 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~ 258 (433)
++++.+.. .+.+..+... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 145 ~~~g~~~~--~v~~~~~~~~-~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~------------ 208 (455)
T 2yqu_A 145 PWAQVDYE--RVVTSTEALS-FPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDL------------ 208 (455)
T ss_dssp TTBCCCSS--SEECHHHHTC-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCH------------
T ss_pred CCCCCCcC--cEechHHhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCH------------
Confidence 88775431 2333333322 22346899999999999999999999999999999988 55553221
Q ss_pred hhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--Ce--
Q 013943 259 KWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--YA-- 332 (433)
Q Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~~-- 332 (433)
...+ .+.+.+++.+|+++.+ +.+++. ++
T Consensus 209 -----~~~~-----------------------------------------~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~ 242 (455)
T 2yqu_A 209 -----EVSR-----------------------------------------AAERVFKKQGLTIRTGVRVTAVVPEAKGAR 242 (455)
T ss_dssp -----HHHH-----------------------------------------HHHHHHHHHTCEEECSCCEEEEEEETTEEE
T ss_pred -----HHHH-----------------------------------------HHHHHHHHCCCEEEECCEEEEEEEeCCEEE
Confidence 1111 1123344457787775 666653 33
Q ss_pred EEEcCCcEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeeccccc---ccchhhHHHHH
Q 013943 333 VEFVNGRCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL---LGVAMDAKRIA 408 (433)
Q Consensus 333 v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~---~~a~~~g~~~a 408 (433)
+.+.+++++++|.||+|+|+.|+...+ ++..++..+++|++.+| +.++++.|+||++|||+... ..|..+|+.+|
T Consensus 243 v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa 321 (455)
T 2yqu_A 243 VELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAV 321 (455)
T ss_dssp EEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHH
T ss_pred EEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHH
Confidence 445678889999999999999998433 45567776677889998 56788999999999999753 36899999999
Q ss_pred HHHHhh
Q 013943 409 QDIESC 414 (433)
Q Consensus 409 ~~i~~~ 414 (433)
++|.+.
T Consensus 322 ~~i~~~ 327 (455)
T 2yqu_A 322 EHMVRG 327 (455)
T ss_dssp HHHHHS
T ss_pred HHHcCC
Confidence 999873
No 71
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=5.3e-32 Score=265.91 Aligned_cols=285 Identities=18% Similarity=0.156 Sum_probs=197.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI--PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
.+||+|||||++|+++|..|++.|. +|+++|+++.++. ... . .++.+. ... ...+++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~~-----~--l~~~~~--~~~---------~~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH--HLP-----P--LSKAYL--AGK---------ATAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB--CSG-----G--GGTTTT--TTC---------SCSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC--cCC-----C--CcHHHh--CCC---------CChHHhc
Confidence 4899999999999999999999998 7999999875421 000 0 000000 000 0001110
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCC-c
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGG-D 189 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~-~ 189 (433)
....+++++.+++++++++|+.++... . +|.+.++ ..+.||+||+||| ++|..|+++|.+. .+ .
T Consensus 64 ~~~~~~~~~~gv~~~~~~~v~~i~~~~--~--~v~~~~g--------~~~~~d~lviAtG--~~p~~~~i~G~~~-~~~~ 128 (431)
T 1q1r_A 64 LRTPDAYAAQNIQLLGGTQVTAINRDR--Q--QVILSDG--------RALDYDRLVLATG--GRPRPLPVASGAV-GKAN 128 (431)
T ss_dssp SSCHHHHHHTTEEEECSCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCGGGTTHH-HHST
T ss_pred ccCHHHHHhCCCEEEeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEcCC--CCccCCCCCCccc-CCCc
Confidence 011234456789999999999998654 3 3666665 5899999999999 7888888888642 11 0
Q ss_pred -eeeccCCCC-----CCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 190 -IRHTSLYKS-----GEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 190 -~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
+.......+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ++++.. +++
T Consensus 129 ~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~----------------~~~ 191 (431)
T 1q1r_A 129 NFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERV----------------TAP 191 (431)
T ss_dssp TEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTT----------------SCH
T ss_pred eEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccch----------------hhH
Confidence 221111110 112357899999999999999999999999999999887 444321 111
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC----C---eEE
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR----Y---AVE 334 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~----~---~v~ 334 (433)
...+ .+.+.+++.+|+++.+ +.++.. + .+.
T Consensus 192 ~~~~-----------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~ 230 (431)
T 1q1r_A 192 PVSA-----------------------------------------FYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVL 230 (431)
T ss_dssp HHHH-----------------------------------------HHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEE
T ss_pred HHHH-----------------------------------------HHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEE
Confidence 1111 1123344557787766 677754 2 467
Q ss_pred EcCCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeeccccc-------------ccch
Q 013943 335 FVNGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL-------------LGVA 401 (433)
Q Consensus 335 ~~~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~-------------~~a~ 401 (433)
+.+|+++++|.||+|+|+.|+. .++++.++.. ++| +.+| +.++|+.|+|||+|||+... ..|.
T Consensus 231 ~~~G~~i~~D~Vv~a~G~~p~~-~l~~~~gl~~-~~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~ 306 (431)
T 1q1r_A 231 CEDGTRLPADLVIAGIGLIPNC-ELASAAGLQV-DNG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNAL 306 (431)
T ss_dssp ETTSCEEECSEEEECCCEEECC-HHHHHTTCCB-SSS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHH
T ss_pred eCCCCEEEcCEEEECCCCCcCc-chhhccCCCC-CCC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHH
Confidence 8899999999999999999998 5788778876 456 7888 67889999999999999642 3588
Q ss_pred hhHHHHHHHHHhh
Q 013943 402 MDAKRIAQDIESC 414 (433)
Q Consensus 402 ~~g~~~a~~i~~~ 414 (433)
.+|+.+|.+|.+.
T Consensus 307 ~qg~~aa~~i~g~ 319 (431)
T 1q1r_A 307 EQARKIAAILCGK 319 (431)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999864
No 72
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=3.1e-31 Score=262.10 Aligned_cols=286 Identities=17% Similarity=0.187 Sum_probs=197.9
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
+||+|||||++|+++|..|++. |.+|+|||+++.++.. ... +...... .. ...+++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--~~~---~~~~~~~------~~---------~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL--SAG---MQLYLEG------KV---------KDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC--GGG---HHHHHTT------SS---------CCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc--ccc---chhhhcC------cc---------CCHHHhhc
Confidence 4799999999999999999998 8999999998865411 100 0000000 00 01111111
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEE-eecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKT-TVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~-~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
+..+.+.+.+++++.++.|+.++.+. +.+++.. .+| +..++.||+||+||| ++|..|++||.+. .+ +
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~~~~~~~g------~~~~~~~d~lviAtG--~~p~~p~i~G~~~-~~-v 128 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPKE--HQVTVKDLVSG------EERVENYDKLIISPG--AVPFELDIPGKDL-DN-I 128 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETTT--TEEEEEETTTC------CEEEEECSEEEECCC--EEECCCCSTTTTS-BS-E
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCCC--CEEEEEecCCC------ceEEEeCCEEEEcCC--CCcCCCCCCCCCC-CC-e
Confidence 22344556789988999999988765 4544443 112 124689999999999 8888998888752 12 3
Q ss_pred eeccCCCCC-------CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcch
Q 013943 191 RHTSLYKSG-------EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPM 263 (433)
Q Consensus 191 ~~~~~~~~~-------~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~ 263 (433)
++...+.+. ....+++++|||+|++|+|+|..|.+.|.+|+++.+.+ ++++.. +++
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~----------------~~~ 191 (447)
T 1nhp_A 129 YLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVY----------------LDK 191 (447)
T ss_dssp ECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTT----------------CCH
T ss_pred EEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-cccccc----------------CCH
Confidence 332222110 11257899999999999999999999999999999987 443321 011
Q ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCe----EEEcC
Q 013943 264 RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYA----VEFVN 337 (433)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~----v~~~~ 337 (433)
.. ...+.+.+++.+|+++.+ +.++..++ +.+ +
T Consensus 192 ~~-----------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~ 229 (447)
T 1nhp_A 192 EF-----------------------------------------TDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-D 229 (447)
T ss_dssp HH-----------------------------------------HHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-S
T ss_pred HH-----------------------------------------HHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-C
Confidence 11 111224455678888875 77776542 444 6
Q ss_pred CcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc-------------cccchhhH
Q 013943 338 GRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG-------------LLGVAMDA 404 (433)
Q Consensus 338 g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~-------------~~~a~~~g 404 (433)
++++++|.||+|+|+.|+. .++++. +..+++|++.+| ++++|+.|+|||+|||+.. +..|..+|
T Consensus 230 ~~~i~~d~vi~a~G~~p~~-~~~~~~-~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg 306 (447)
T 1nhp_A 230 KNAYDADLVVVAVGVRPNT-AWLKGT-LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQG 306 (447)
T ss_dssp SCEEECSEEEECSCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHH
T ss_pred CCEEECCEEEECcCCCCCh-HHHHhh-hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHH
Confidence 6789999999999999998 566666 655678989999 6788999999999999852 34689999
Q ss_pred HHHHHHHHh
Q 013943 405 KRIAQDIES 413 (433)
Q Consensus 405 ~~~a~~i~~ 413 (433)
+.+|++|.+
T Consensus 307 ~~aa~~i~g 315 (447)
T 1nhp_A 307 RFAVKNLEE 315 (447)
T ss_dssp HHHHHTSSS
T ss_pred HHHHHhhcC
Confidence 999999875
No 73
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.97 E-value=6.2e-31 Score=264.12 Aligned_cols=305 Identities=14% Similarity=0.108 Sum_probs=194.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC--------CCCCccccc-ccCceeeecCCc----eeecCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN--------CIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFPS 98 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~--------~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 98 (433)
..|||+|||||++|+++|..|++.|.+|+|||+.+ .+||.|... +++...+..+.. ...+..+.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 45899999999999999999999999999999964 678876542 111111000000 00000111110
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEE
Q 013943 99 EFPTYPSKQQFVDYLEA-----------YAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVV 167 (433)
Q Consensus 99 ~~~~~~~~~~~~~~l~~-----------~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vii 167 (433)
..........+..+... .++..++++..+ .+..++ . ..+.|...++ +...+.||+||+
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d--~--~~v~v~~~~g------~~~~i~~d~lVi 179 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIG--P--HRIKATNNKG------KEKIYSAERFLI 179 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TEEEEECTTC------CCCEEEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--C--CEEEEEcCCC------CEEEEECCEEEE
Confidence 11112233444333332 334456665444 333332 2 3444544332 235899999999
Q ss_pred ccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccC
Q 013943 168 ATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLG 247 (433)
Q Consensus 168 AtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~ 247 (433)
||| ++|..|+++|... ...+...... ....+++++|||+|.+|+|+|..|++.|.+||++.|. .+++..+.
T Consensus 180 ATG--s~p~~p~i~G~~~---~~~t~~~~~~-l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~l~~~d~- 250 (519)
T 3qfa_A 180 ATG--ERPRYLGIPGDKE---YCISSDDLFS-LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--ILLRGFDQ- 250 (519)
T ss_dssp CCC--EEECCCCCTTHHH---HCBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCH-
T ss_pred ECC--CCcCCCCCCCccC---ceEcHHHHhh-hhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cccccCCH-
Confidence 999 8899998888543 1222222222 2345678999999999999999999999999999884 34443221
Q ss_pred CcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--c
Q 013943 248 KSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--I 325 (433)
Q Consensus 248 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v 325 (433)
. ....+.+.+++.+|+++.+ +
T Consensus 251 ----------------~-----------------------------------------~~~~~~~~l~~~GV~v~~~~~v 273 (519)
T 3qfa_A 251 ----------------D-----------------------------------------MANKIGEHMEEHGIKFIRQFVP 273 (519)
T ss_dssp ----------------H-----------------------------------------HHHHHHHHHHHTTCEEEESEEE
T ss_pred ----------------H-----------------------------------------HHHHHHHHHHHCCCEEEeCCeE
Confidence 1 1111123455677888766 3
Q ss_pred eEE---eC---CeE--EE--cCCc---EecccEEEEccCCCCCCCCc-ccccccccc-CCCCcCCCCCCCCCCCCceEEe
Q 013943 326 KRL---KR---YAV--EF--VNGR---CENFDAIILATGYRSNVPSW-LKESEMFSR-KDGLPRRPFPNGWKGESGLYSV 390 (433)
Q Consensus 326 ~~~---~~---~~v--~~--~~g~---~~~~D~vi~atG~~~~~~~~-~~~~~l~~~-~~g~~~~~~~~~~~~~~~iya~ 390 (433)
.++ .. +.+ .+ .++. ++++|.||+|+|+.|+...+ +...++..+ ++|++.+| ++++|+.|+|||+
T Consensus 274 ~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd-~~~~Ts~~~IyA~ 352 (519)
T 3qfa_A 274 IKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT-DEEQTNVPYIYAI 352 (519)
T ss_dssp EEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC-TTSBCSSTTEEEC
T ss_pred EEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC-CCCccCCCCEEEE
Confidence 333 32 222 22 3452 46899999999999998434 566677776 57999999 6788999999999
Q ss_pred eecc-cc---cccchhhHHHHHHHHHhh
Q 013943 391 GFTK-RG---LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 391 Gd~~-~~---~~~a~~~g~~~a~~i~~~ 414 (433)
|||+ .. +..|..+|+.+|++|.+.
T Consensus 353 GD~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 353 GDILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp GGGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 9998 32 346899999999999864
No 74
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=6.9e-31 Score=262.06 Aligned_cols=302 Identities=18% Similarity=0.172 Sum_probs=195.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC---------CCCCccccc-ccCceeeecCCc----eeecCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN---------CIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFP 97 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~---------~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~ 97 (433)
..|||+|||||++|+++|..|++.|++|+|||+.. .+||.|... ++|...+..+.. ......+.+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 56999999999999999999999999999999421 378876542 111110000000 0000001110
Q ss_pred CCCCCCCCHHHHHHHHHHH-----------HHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEE
Q 013943 98 SEFPTYPSKQQFVDYLEAY-----------AKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLV 166 (433)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~-----------~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vi 166 (433)
...........+..+...+ ++..++++..+ ....+ +. ..+.+.+.++ ...+.||+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~--~~--~~v~v~~~~g-------~~~~~~d~lv 155 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFV--DS--HTLLAKLKSG-------ERTITAQTFV 155 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEE--ET--TEEEEECTTC-------CEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEc--cC--CEEEEEeCCC-------eEEEEcCEEE
Confidence 0101122344444433332 33445554433 22222 22 4555655443 2579999999
Q ss_pred EccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceeccccc
Q 013943 167 VATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEML 246 (433)
Q Consensus 167 iAtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~ 246 (433)
+||| ++|..|++||.+.+ ..+..... .....+++++|||+|.+|+|+|..|++.|.+|+++.|.. +++..+.
T Consensus 156 iATG--s~p~~p~i~G~~~~---~~~~~~~~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~ 227 (483)
T 3dgh_A 156 IAVG--GRPRYPDIPGAVEY---GITSDDLF-SLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI--VLRGFDQ 227 (483)
T ss_dssp ECCC--EEECCCSSTTHHHH---CBCHHHHT-TCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC--SSTTSCH
T ss_pred EeCC--CCcCCCCCCCcccc---cCcHHHHh-hhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CCcccCH
Confidence 9999 88999988886431 22222222 223457899999999999999999999999999998843 3443211
Q ss_pred CCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--
Q 013943 247 GKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-- 324 (433)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 324 (433)
.. ...+.+.+++.+|+++.+
T Consensus 228 -----------------~~-----------------------------------------~~~l~~~l~~~Gv~i~~~~~ 249 (483)
T 3dgh_A 228 -----------------QM-----------------------------------------AELVAASMEERGIPFLRKTV 249 (483)
T ss_dssp -----------------HH-----------------------------------------HHHHHHHHHHTTCCEEETEE
T ss_pred -----------------HH-----------------------------------------HHHHHHHHHhCCCEEEeCCE
Confidence 11 111124455667888776
Q ss_pred ceEEeC--Ce---EEEcCCc-----EecccEEEEccCCCCCCCCcc--ccccccccCCCCcCCCCCCCCCCCCceEEeee
Q 013943 325 IKRLKR--YA---VEFVNGR-----CENFDAIILATGYRSNVPSWL--KESEMFSRKDGLPRRPFPNGWKGESGLYSVGF 392 (433)
Q Consensus 325 v~~~~~--~~---v~~~~g~-----~~~~D~vi~atG~~~~~~~~~--~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd 392 (433)
+.++.. ++ +.+.+++ ++++|.||+|+|+.|+. .++ ...++..++ |++.+| ++++|+.|+|||+||
T Consensus 250 v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~-~~l~l~~~gl~~~~-G~i~vd-~~~~t~~~~IyA~GD 326 (483)
T 3dgh_A 250 PLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLV-DDLNLPNAGVTVQK-DKIPVD-SQEATNVANIYAVGD 326 (483)
T ss_dssp EEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECC-GGGTGGGTTCCCBT-TBBCCC-TTCBCSSTTEEECST
T ss_pred EEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCc-CcCCchhcCccccC-CEEEEC-cCCccCCCCEEEEEc
Confidence 666653 22 5665553 68999999999999998 444 556887766 999999 678899999999999
Q ss_pred cccc----cccchhhHHHHHHHHHhh
Q 013943 393 TKRG----LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 393 ~~~~----~~~a~~~g~~~a~~i~~~ 414 (433)
|+.+ +..|..+|+.+|++|.+.
T Consensus 327 ~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 327 IIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp TBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 9732 346899999999999864
No 75
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=5e-31 Score=263.29 Aligned_cols=306 Identities=15% Similarity=0.134 Sum_probs=197.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEec--------CCCCCCccccc-ccCceeeecCCc----eeecCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLER--------SNCIASLWQLK-TYDRLRLHLPKQ----FCELPLMGFPS 98 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~--------~~~~gg~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 98 (433)
..|||+|||||++|+++|..|++.|.+|+|||+ ...+||.|... ++|...+..... ......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 458999999999999999999999999999997 45688877542 121111100000 00001111110
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEE
Q 013943 99 EFPTYPSKQQFVDYLEA-----------YAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVV 167 (433)
Q Consensus 99 ~~~~~~~~~~~~~~l~~-----------~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vii 167 (433)
..........+..+... .+...++++..+ ++..+ . ...+.+...++ +...+.||+||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~---~-~~~v~v~~~~g------~~~~~~~d~lVi 153 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFV---D-EHTVRGVDKGG------KATLLSAEHIVI 153 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEES---S-SSEEEEECTTS------CEEEEEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEc---c-CCeEEEEeCCC------ceEEEECCEEEE
Confidence 10112334444433332 333445554333 22221 1 14455554332 246899999999
Q ss_pred ccCCCCCCccCC-ccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceeccccc
Q 013943 168 ATGENAEAVVPE-IEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEML 246 (433)
Q Consensus 168 AtG~~~~p~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~ 246 (433)
||| ++|..|+ +||.... ..+..... .....+++++|||+|.+|+|+|..|++.|.+|+++.+.+ +++..+.
T Consensus 154 ATG--s~p~~p~~i~G~~~~---~~~~~~~~-~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~ 225 (488)
T 3dgz_A 154 ATG--GRPRYPTQVKGALEY---GITSDDIF-WLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGFDQ 225 (488)
T ss_dssp CCC--EEECCCSSCBTHHHH---CBCHHHHT-TCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTSCH
T ss_pred cCC--CCCCCCCCCCCcccc---cCcHHHHH-hhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccCCH
Confidence 999 8899988 8886431 22222222 223457799999999999999999999999999998864 3332211
Q ss_pred CCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--
Q 013943 247 GKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-- 324 (433)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 324 (433)
. ....+.+.+++.+|+++.+
T Consensus 226 -----------------~-----------------------------------------~~~~l~~~l~~~gv~~~~~~~ 247 (488)
T 3dgz_A 226 -----------------Q-----------------------------------------MSSLVTEHMESHGTQFLKGCV 247 (488)
T ss_dssp -----------------H-----------------------------------------HHHHHHHHHHHTTCEEEETEE
T ss_pred -----------------H-----------------------------------------HHHHHHHHHHHCCCEEEeCCE
Confidence 1 1111224455678888876
Q ss_pred ceEEeC---Ce--EEEcC---Cc--EecccEEEEccCCCCCCCCc-ccccccccc-CCCCcCCCCCCCCCCCCceEEeee
Q 013943 325 IKRLKR---YA--VEFVN---GR--CENFDAIILATGYRSNVPSW-LKESEMFSR-KDGLPRRPFPNGWKGESGLYSVGF 392 (433)
Q Consensus 325 v~~~~~---~~--v~~~~---g~--~~~~D~vi~atG~~~~~~~~-~~~~~l~~~-~~g~~~~~~~~~~~~~~~iya~Gd 392 (433)
+.++.. +. +.+.+ |+ ++++|.||+|+|+.|+...+ +...++..+ ++|++.+| ++++|+.|+|||+||
T Consensus 248 v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd-~~~~t~~~~IyA~GD 326 (488)
T 3dgz_A 248 PSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVD-AQEATSVPHIYAIGD 326 (488)
T ss_dssp EEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCC-TTSBCSSTTEEECGG
T ss_pred EEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeEC-CCCccCCCCEEEeEE
Confidence 566642 22 44544 54 47899999999999998433 456678776 68999999 788899999999999
Q ss_pred cccc----cccchhhHHHHHHHHHhhh
Q 013943 393 TKRG----LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 393 ~~~~----~~~a~~~g~~~a~~i~~~l 415 (433)
|+.+ +..|..+|+.+|++|.+..
T Consensus 327 ~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 327 VAEGRPELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp GBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred ecCCCCcchhHHHHHHHHHHHHHcCCC
Confidence 9732 3468999999999998653
No 76
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=1.7e-29 Score=250.08 Aligned_cols=296 Identities=18% Similarity=0.198 Sum_probs=196.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc-ccCceeeecCC----ceeecCC---CCCCCCCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK-TYDRLRLHLPK----QFCELPL---MGFPSEFPTY 103 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~-~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~ 103 (433)
..|||+|||||++|+++|..|++.|++|+|||+ +.+||.|... +.+.-.+.... .+..+.. +..+.. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 81 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPR 81 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCc
Confidence 358999999999999999999999999999999 6788877531 11110000000 0000000 111100 011
Q ss_pred CCHHHHHHH-----------HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCC
Q 013943 104 PSKQQFVDY-----------LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 104 ~~~~~~~~~-----------l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~ 172 (433)
....++..+ +..++++.+++++.++.+. + +. .. +.+.+ ..+.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~--v~v~~---------~~~~~d~lviATG-- 143 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-L--DG--KQ--VEVDG---------QRIQCEHLLLATG-- 143 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-E--ET--TE--EEETT---------EEEECSEEEECCC--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-c--cC--CE--EEEee---------EEEEeCEEEEeCC--
Confidence 233333322 3355667788888776543 2 22 23 44432 5799999999999
Q ss_pred CCCccCC-ccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcch
Q 013943 173 AEAVVPE-IEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTF 251 (433)
Q Consensus 173 ~~p~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~ 251 (433)
++|..|+ ++. + +.+.+..+.... ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|..+.
T Consensus 144 s~p~~~~~~~~-~---~~v~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~----- 212 (458)
T 1lvl_A 144 SSSVELPMLPL-G---GPVISSTEALAP-KALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTYDS----- 212 (458)
T ss_dssp EEECCBTTBCC-B---TTEECHHHHTCC-SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH-----
T ss_pred CCCCCCCCCCc-c---CcEecHHHHhhh-hccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCH-----
Confidence 7777665 442 1 234444333322 2357899999999999999999999999999999988 55553211
Q ss_pred hhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEe
Q 013943 252 GLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLK 329 (433)
Q Consensus 252 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~ 329 (433)
... ..+.+.+++.+|+++.+ +.+++
T Consensus 213 ------------~~~-----------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~ 239 (458)
T 1lvl_A 213 ------------ELT-----------------------------------------APVAESLKKLGIALHLGHSVEGYE 239 (458)
T ss_dssp ------------HHH-----------------------------------------HHHHHHHHHHTCEEETTCEEEEEE
T ss_pred ------------HHH-----------------------------------------HHHHHHHHHCCCEEEECCEEEEEE
Confidence 111 11123345567888876 77776
Q ss_pred CCeEEEc--CC--cEecccEEEEccCCCCCCCCc-cccccccccCCCCcCCCCCCCCCCCCceEEeeecccc---cccch
Q 013943 330 RYAVEFV--NG--RCENFDAIILATGYRSNVPSW-LKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG---LLGVA 401 (433)
Q Consensus 330 ~~~v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~---~~~a~ 401 (433)
.+.+.+. +| +++++|.||+|+|+.|+...+ ++..++..+++ ++.+| +.++++.|+|||+|||+.. ...|.
T Consensus 240 ~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~ 317 (458)
T 1lvl_A 240 NGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHRAM 317 (458)
T ss_dssp TTEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHHHH
T ss_pred eCCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHHHH
Confidence 5435444 56 579999999999999998433 45567766555 78888 5678999999999999975 34689
Q ss_pred hhHHHHHHHHHh
Q 013943 402 MDAKRIAQDIES 413 (433)
Q Consensus 402 ~~g~~~a~~i~~ 413 (433)
.+|+.+|++|.+
T Consensus 318 ~~g~~aa~~i~g 329 (458)
T 1lvl_A 318 AQGEMVAEIIAG 329 (458)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 77
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.96 E-value=9.2e-31 Score=261.73 Aligned_cols=306 Identities=15% Similarity=0.124 Sum_probs=190.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC--------CCCCc-ccccccCceeeecCCceee-----cCCCCCCCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN--------CIASL-WQLKTYDRLRLHLPKQFCE-----LPLMGFPSE 99 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~--------~~gg~-w~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 99 (433)
|||+|||+||+|+.+|.++++.|.+|+|||+.. .+||. .+..+.|.-.+........ ...+.+...
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~~ 122 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFD 122 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcccC
Confidence 899999999999999999999999999999753 36663 2222222111100000000 000000000
Q ss_pred CCCCCCHHHHHHH-----------HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEc
Q 013943 100 FPTYPSKQQFVDY-----------LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVA 168 (433)
Q Consensus 100 ~~~~~~~~~~~~~-----------l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiA 168 (433)
..-.....+..+ ....+++.++++..+. . .+ .+. ..+.|..... ....+.+++|++|||
T Consensus 123 -~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~-a-~f-~~~--~~v~V~~~~~----~~~~~~i~a~~iiIA 192 (542)
T 4b1b_A 123 -NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL-A-KL-KDK--NTVSYYLKGD----LSKEETVTGKYILIA 192 (542)
T ss_dssp -EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE-E-EE-EET--TEEEEEEC------CCCEEEEEEEEEEEC
T ss_pred -cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-E-EE-cCC--CcceEeeccc----CCceEEEeeeeEEec
Confidence 000122222222 2223445566654432 1 11 112 4444444321 223478999999999
Q ss_pred cCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCC
Q 013943 169 TGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGK 248 (433)
Q Consensus 169 tG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~ 248 (433)
|| ++|.+|+..+... ....+++........+++++|||+|.+|+|+|..+++.|.+||++.|. .+||..+.
T Consensus 193 TG--s~P~~P~~~~~~~---~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~~L~~~D~-- 263 (542)
T 4b1b_A 193 TG--CRPHIPDDVEGAK---ELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--IVLRGFDQ-- 263 (542)
T ss_dssp CC--EEECCCSSSBTHH---HHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--CSSTTSCH--
T ss_pred cC--CCCCCCCcccCCC---ccccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--ccccccch--
Confidence 99 8999886433221 112233222233455789999999999999999999999999999874 45665443
Q ss_pred cchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ce
Q 013943 249 STFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IK 326 (433)
Q Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~ 326 (433)
. +...+.+.+++.+|+++.+ +.
T Consensus 264 ---e-----------------------------------------------------i~~~l~~~l~~~gi~~~~~~~v~ 287 (542)
T 4b1b_A 264 ---Q-----------------------------------------------------CAVKVKLYMEEQGVMFKNGILPK 287 (542)
T ss_dssp ---H-----------------------------------------------------HHHHHHHHHHHTTCEEEETCCEE
T ss_pred ---h-----------------------------------------------------HHHHHHHHHHhhcceeecceEEE
Confidence 1 1111224455667888776 45
Q ss_pred EEeC--Ce--EEEcCCcEecccEEEEccCCCCCCCCcccc-ccccccCCCCc-CCCCCCCCCCCCceEEeeecccc----
Q 013943 327 RLKR--YA--VEFVNGRCENFDAIILATGYRSNVPSWLKE-SEMFSRKDGLP-RRPFPNGWKGESGLYSVGFTKRG---- 396 (433)
Q Consensus 327 ~~~~--~~--v~~~~g~~~~~D~vi~atG~~~~~~~~~~~-~~l~~~~~g~~-~~~~~~~~~~~~~iya~Gd~~~~---- 396 (433)
++.. +. +.+.+++++++|.|++|+|.+||+..+-.+ .++..+..+.+ ++| ++++|+.|+|||+||++..
T Consensus 288 ~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd-~~~~Ts~p~IyAiGDv~~~~p~L 366 (542)
T 4b1b_A 288 KLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIAD-HLSCTNIPSIFAVGDVAENVPEL 366 (542)
T ss_dssp EEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCC-TTSBCSSTTEEECTTSBTTCCCC
T ss_pred EEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecc-ccccccCCCeEEeccccCCchhH
Confidence 4433 23 566788889999999999999999544333 36666666665 555 7899999999999999854
Q ss_pred cccchhhHHHHHHHHHhhh
Q 013943 397 LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~l 415 (433)
...|..+|+.+++++.+.-
T Consensus 367 a~~A~~eg~~aa~~i~g~~ 385 (542)
T 4b1b_A 367 APVAIKAGEILARRLFKDS 385 (542)
T ss_dssp HHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 3367899999999998653
No 78
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.96 E-value=1.4e-30 Score=256.51 Aligned_cols=292 Identities=13% Similarity=0.150 Sum_probs=202.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKE---RGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQ 108 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~---~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
.|+||+|||||++|+++|..|++ .+++|+|||+++.+.. .. .+.. ...+....++
T Consensus 3 ~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~-------~~~~--------~~~g~~~~~~ 60 (437)
T 3sx6_A 3 GSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VP-------SNPW--------VGVGWKERDD 60 (437)
T ss_dssp TSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GG-------GHHH--------HHHTSSCHHH
T ss_pred CCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cC-------Cccc--------cccCccCHHH
Confidence 37899999999999999999999 7899999999873310 00 0000 0012234556
Q ss_pred HHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCC
Q 013943 109 FVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGG 188 (433)
Q Consensus 109 ~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~ 188 (433)
+...+.+++++.+++++. .+|+.++.+. . +|++.++ ..+.||+||+||| +++..|.+||.....+
T Consensus 61 ~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~--~V~~~~g--------~~i~~d~lviAtG--~~~~~~~ipG~~~~~~ 125 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFIA-QSAEQIDAEA--Q--NITLADG--------NTVHYDYLMIATG--PKLAFENVPGSDPHEG 125 (437)
T ss_dssp HEEECHHHHHTTTCEEEC-SCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--CEECGGGSTTCSTTTS
T ss_pred HHHHHHHHHHHCCCEEEE-eEEEEEEcCC--C--EEEECCC--------CEEECCEEEECCC--CCcCcccCCCCCcccC
Confidence 666667777778888764 5899998755 3 3777765 6799999999999 7888888998875433
Q ss_pred ceeeccCCCCCCC--------CCCCeEEEECCCCcH------HHHH----HHHhccCCC-----cEEEEecCcceecccc
Q 013943 189 DIRHTSLYKSGED--------FRGKRVLVVGCGNSG------MEVC----LDLCNHDAM-----PSLVVRDTVHVLPQEM 245 (433)
Q Consensus 189 ~~~~~~~~~~~~~--------~~~~~v~VvG~G~~a------~e~a----~~l~~~g~~-----Vtl~~r~~~~~lp~~~ 245 (433)
...+.+...+... ..+++++|||+|++| +|+| ..+.+.|.+ |+++.+.+ ++.+...
T Consensus 126 ~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~-~~~~~~l 204 (437)
T 3sx6_A 126 PVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP-YIGHLGI 204 (437)
T ss_dssp SEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-STTCTTT
T ss_pred cceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-ccccccc
Confidence 3433333322111 114567899986654 8888 444555653 99999887 3321100
Q ss_pred cCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-
Q 013943 246 LGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG- 324 (433)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 324 (433)
.+.+ .....+.+.+++.+|+++.+
T Consensus 205 ~~~~-------------------------------------------------------~~~~~~~~~l~~~gI~~~~~~ 229 (437)
T 3sx6_A 205 QGVG-------------------------------------------------------DSKGILTKGLKEEGIEAYTNC 229 (437)
T ss_dssp TCCT-------------------------------------------------------THHHHHHHHHHHTTCEEECSE
T ss_pred Ccch-------------------------------------------------------HHHHHHHHHHHHCCCEEEcCC
Confidence 0000 01112234566779999987
Q ss_pred -ceEEeCCeEEEcC---------CcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCC-CCCceEEeeec
Q 013943 325 -IKRLKRYAVEFVN---------GRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWK-GESGLYSVGFT 393 (433)
Q Consensus 325 -v~~~~~~~v~~~~---------g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~-~~~~iya~Gd~ 393 (433)
+.+++++++.+.+ ++++++|.+++|+|+.++. .+....++ .+++|++.+|. .+++ +.|||||+|||
T Consensus 230 ~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~-~~~~~~gl-~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~ 306 (437)
T 3sx6_A 230 KVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP-AVAGVEGL-CNPGGFVLVDE-HQRSKKYANIFAAGIA 306 (437)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCH-HHHTSTTT-BCTTSCBCBCT-TSBBSSCTTEEECGGG
T ss_pred EEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCch-hhhccccc-cCCCCcEEeCh-hccCCCCCCEEEEEEE
Confidence 8899988877764 6679999999999999874 23323466 45889999994 5666 89999999999
Q ss_pred ccc---------------cccchhhHHHHHHHHHhhhccCC
Q 013943 394 KRG---------------LLGVAMDAKRIAQDIESCWKAKA 419 (433)
Q Consensus 394 ~~~---------------~~~a~~~g~~~a~~i~~~l~~~~ 419 (433)
+.. ...|..+|+.+|++|.+.+....
T Consensus 307 ~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~ 347 (437)
T 3sx6_A 307 IAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRK 347 (437)
T ss_dssp BCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred eccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 863 22689999999999999988643
No 79
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.96 E-value=4.7e-31 Score=263.03 Aligned_cols=298 Identities=15% Similarity=0.166 Sum_probs=194.4
Q ss_pred CCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHH
Q 013943 28 PRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQ 107 (433)
Q Consensus 28 ~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (433)
|...+.++|||||||+||+.+|..|.+.+++|+|||+++.+ .| ..+. +. ...+.....
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~~-----~PlL-------~~--------va~G~l~~~ 94 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--LF-----TPLL-------PS--------APVGTVDEK 94 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--EC-----GGGG-------GG--------TTTTSSCGG
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--cc-----ccch-------hH--------HhhccccHH
Confidence 55567789999999999999999999999999999998732 11 1100 00 001111112
Q ss_pred HHHHHHHHHHHH--cCCcceecceEEEEEEeCCCCeEEEEEeecC----------cCCCceeEEEEeCEEEEccCCCCCC
Q 013943 108 QFVDYLEAYAKR--FEIRPRFNETVSQAEYDATIRFWRVKTTVGG----------QKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 108 ~~~~~l~~~~~~--~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~----------~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
++...+...... .++++. ..+|++|+.+. +.+++...++. .....+..++.||+|||||| +++
T Consensus 95 ~i~~p~~~~~~~~~~~v~~~-~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtG--s~~ 169 (502)
T 4g6h_A 95 SIIEPIVNFALKKKGNVTYY-EAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVG--AEP 169 (502)
T ss_dssp GGEEEHHHHHTTCSSCEEEE-EEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCC--CEE
T ss_pred HhhhhHHHHHHhhcCCeEEE-EEEEEEEEhhh--CEEEEeecccceeecccccccccccCCceEEeCCEEEEcCC--ccc
Confidence 221122222222 233333 44788888876 55444331100 00012347899999999999 889
Q ss_pred ccCCccCCCCCCCceeeccCCCC----------------------CCCCCCCeEEEECCCCcHHHHHHHHhccC------
Q 013943 176 VVPEIEGSDEFGGDIRHTSLYKS----------------------GEDFRGKRVLVVGCGNSGMEVCLDLCNHD------ 227 (433)
Q Consensus 176 ~~p~~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~v~VvG~G~~a~e~a~~l~~~g------ 227 (433)
+.+++||...+. +......+ .......+++|||+|++|+|+|..|++.+
T Consensus 170 ~~~~ipG~~e~a---~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~ 246 (502)
T 4g6h_A 170 NTFGIPGVTDYG---HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRK 246 (502)
T ss_dssp CCTTCTTHHHHC---EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCCccCccccc---CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHh
Confidence 888898865321 11111000 00112358999999999999999987642
Q ss_pred --------CCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCccccccc
Q 013943 228 --------AMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNL 299 (433)
Q Consensus 228 --------~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (433)
.+|+++.+.+ +++|..+. .
T Consensus 247 ~~~~~~~~~~V~lve~~~-~il~~~~~-----------------~----------------------------------- 273 (502)
T 4g6h_A 247 FLPALAEEVQIHLVEALP-IVLNMFEK-----------------K----------------------------------- 273 (502)
T ss_dssp HCHHHHHHCEEEEECSSS-SSSTTSCH-----------------H-----------------------------------
T ss_pred hcccccccceeEEecccc-ccccCCCH-----------------H-----------------------------------
Confidence 4689998888 56664322 1
Q ss_pred CCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEE----cCC----cEecccEEEEccCCCCCC--CCccccccccc
Q 013943 300 SGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEF----VNG----RCENFDAIILATGYRSNV--PSWLKESEMFS 367 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~----~~g----~~~~~D~vi~atG~~~~~--~~~~~~~~l~~ 367 (433)
......+.+++.+|+++.+ |.+++++++.+ .+| +++++|.||||+|.+|+. ..+....++..
T Consensus 274 ------~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~ 347 (502)
T 4g6h_A 274 ------LSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQN 347 (502)
T ss_dssp ------HHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGT
T ss_pred ------HHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccc
Confidence 1122235567789999988 88998887655 344 359999999999999984 12333445555
Q ss_pred cCCCCcCCCCCCCCC-CCCceEEeeecccc-----cccchhhHHHHHHHHHhhh
Q 013943 368 RKDGLPRRPFPNGWK-GESGLYSVGFTKRG-----LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 368 ~~~g~~~~~~~~~~~-~~~~iya~Gd~~~~-----~~~a~~~g~~~a~~i~~~l 415 (433)
+.+|++.+| +++++ +.|+|||+|||+.. ...|..||+.+|++|.+..
T Consensus 348 ~~~g~I~Vd-~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 348 SSKRGLAVN-DFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp TCCSSEEBC-TTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCceeEC-CccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 678889999 45555 89999999999853 3468999999999997643
No 80
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.96 E-value=2.5e-30 Score=252.72 Aligned_cols=285 Identities=16% Similarity=0.100 Sum_probs=197.0
Q ss_pred CCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKE---RGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~---~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
|+||+|||||++|+++|..|++ .|++|+|||+++.++..... +. ...+....+++
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~-----------------~~-----~~~~~~~~~~~ 58 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL-----------------PH-----VAIGVRDVDEL 58 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS-----------------CC-----CCSSCCCCCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch-----------------hh-----cccCCcCHHHH
Confidence 5789999999999999999999 89999999999843211000 00 00111122233
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCc
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGD 189 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~ 189 (433)
..++.+.+.+.+++++.+ +|+.++.+. .. |++.++ ..+...+.||+||+||| .+|..|.++|.+. .
T Consensus 59 ~~~~~~~~~~~gv~~~~~-~v~~i~~~~--~~--V~~~~g----~~~~~~~~~d~lViAtG--~~~~~~~ipG~~~---~ 124 (409)
T 3h8l_A 59 KVDLSEALPEKGIQFQEG-TVEKIDAKS--SM--VYYTKP----DGSMAEEEYDYVIVGIG--AHLATELVKGWDK---Y 124 (409)
T ss_dssp EEEHHHHTGGGTCEEEEC-EEEEEETTT--TE--EEEECT----TSCEEEEECSEEEECCC--CEECGGGSBTHHH---H
T ss_pred HHHHHHHHhhCCeEEEEe-eEEEEeCCC--CE--EEEccC----CcccceeeCCEEEECCC--CCcCccCCCChhh---c
Confidence 444555666778888776 898888655 33 555554 33346799999999999 7888888887653 2
Q ss_pred eeeccCCCCCCCC------CCCeEEEECCCC-------------------------cHHHHHHH----HhccC----CCc
Q 013943 190 IRHTSLYKSGEDF------RGKRVLVVGCGN-------------------------SGMEVCLD----LCNHD----AMP 230 (433)
Q Consensus 190 ~~~~~~~~~~~~~------~~~~v~VvG~G~-------------------------~a~e~a~~----l~~~g----~~V 230 (433)
..+.+.+.+.... ..++++|||+|. .++|+|.. +.+.| .+|
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v 204 (409)
T 3h8l_A 125 GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHV 204 (409)
T ss_dssp CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEE
T ss_pred CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEE
Confidence 2333333221111 125778999992 36787754 44556 379
Q ss_pred EEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchh
Q 013943 231 SLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGT 310 (433)
Q Consensus 231 tl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (433)
+++.+.+ .+|... +.. ...+
T Consensus 205 ~~~~~~~--~l~~~~-----------------~~~-----------------------------------------~~~~ 224 (409)
T 3h8l_A 205 TVFSPGE--YLSDLS-----------------PNS-----------------------------------------RKAV 224 (409)
T ss_dssp EEECSSS--SSTTBC-----------------HHH-----------------------------------------HHHH
T ss_pred EEEeCCc--cccccC-----------------HHH-----------------------------------------HHHH
Confidence 9988776 333211 011 1112
Q ss_pred hhhhhcCCeEEecC--ceEEeCCeEEEcCCcEecccEEEEccCCCCCCCCccccc--cccccCCCCcCCCCCCCCC-CCC
Q 013943 311 LAKIKSGHIRVFPG--IKRLKRYAVEFVNGRCENFDAIILATGYRSNVPSWLKES--EMFSRKDGLPRRPFPNGWK-GES 385 (433)
Q Consensus 311 ~~~~~~~~v~~~~~--v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~--~l~~~~~g~~~~~~~~~~~-~~~ 385 (433)
.+.+++.+|+++.+ |.+++.+++.+++|+++++|.||+|+|+.|+. ++.+. ++. +++|++.+| +.+++ +.|
T Consensus 225 ~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~--~l~~~~~~l~-~~~G~i~vd-~~~~~~~~~ 300 (409)
T 3h8l_A 225 ASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNP--ALKNSTPDLV-DDGGFIPTD-LNMVSIKYD 300 (409)
T ss_dssp HHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCH--HHHTSCGGGS-CTTSCBCBB-TTSBBSSCT
T ss_pred HHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccH--HHHhccccCc-CCCCCEEeC-cccccCCCC
Confidence 24455678999876 89999999999999999999999999999984 66666 553 478999999 45566 899
Q ss_pred ceEEeeecccc-----cccchhhHHHHHHHHHhhhcc
Q 013943 386 GLYSVGFTKRG-----LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 386 ~iya~Gd~~~~-----~~~a~~~g~~~a~~i~~~l~~ 417 (433)
|||++|||+.. ...|..+|+.+|++|.+.+..
T Consensus 301 ~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 301 NVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp TEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999952 346899999999999999844
No 81
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.96 E-value=9.9e-29 Score=252.78 Aligned_cols=303 Identities=13% Similarity=0.115 Sum_probs=189.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecC-C-------CCCCcccc-cccCceeeecCCc----eeecC--CCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERS-N-------CIASLWQL-KTYDRLRLHLPKQ----FCELP--LMGF 96 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~-~-------~~gg~w~~-~~~~~~~~~~~~~----~~~~~--~~~~ 96 (433)
..|||+||||||||+++|..|++.|++|+|||+. + .+||.|.. .+++...+..... +.... ....
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 5689999999999999999999999999999973 2 25665432 1111111000000 00000 0001
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH-----------HcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEE
Q 013943 97 PSEFPTYPSKQQFVDYLEAYAK-----------RFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWL 165 (433)
Q Consensus 97 ~~~~~~~~~~~~~~~~l~~~~~-----------~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~v 165 (433)
+.. .......++.+++..++. ..++++..+ ....++ . ..+.+...+ ++...+.||+|
T Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~--~--~~v~v~~~~------g~~~~~~~d~l 253 (598)
T 2x8g_A 186 DRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLIS--P--HEVQITDKN------QKVSTITGNKI 253 (598)
T ss_dssp CGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TEEEEECTT------CCEEEEEEEEE
T ss_pred cCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcC--C--CEEEEEeCC------CCeEEEEeCEE
Confidence 000 011344555555544332 334443332 222222 1 233333222 22357999999
Q ss_pred EEccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccc
Q 013943 166 VVATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEM 245 (433)
Q Consensus 166 iiAtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~ 245 (433)
|+||| ++|+.|++||...+ ..+...... ....+++++|||+|++|+|+|..|++.|.+||++.|. .++|..+
T Consensus 254 viAtG--s~p~~p~i~G~~~~---~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~d 325 (598)
T 2x8g_A 254 ILATG--ERPKYPEIPGAVEY---GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGFD 325 (598)
T ss_dssp EECCC--EEECCCSSTTHHHH---CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSC
T ss_pred EEeCC--CCCCCCCCCCcccc---eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcCC
Confidence 99999 78999988886432 223222221 2345779999999999999999999999999999987 3334221
Q ss_pred cCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-
Q 013943 246 LGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG- 324 (433)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 324 (433)
. ...+ .+.+.+++.+|+++.+
T Consensus 326 ~-----------------~~~~-----------------------------------------~~~~~l~~~gv~i~~~~ 347 (598)
T 2x8g_A 326 Q-----------------QMAE-----------------------------------------KVGDYMENHGVKFAKLC 347 (598)
T ss_dssp H-----------------HHHH-----------------------------------------HHHHHHHHTTCEEEETE
T ss_pred H-----------------HHHH-----------------------------------------HHHHHHHhCCCEEEECC
Confidence 1 0111 1113344557777665
Q ss_pred -ceEEe--------C---CeEE----EcCCcEec--ccEEEEccCCCCCCCCc--cccccccccCCCCcCCCCCCCCCCC
Q 013943 325 -IKRLK--------R---YAVE----FVNGRCEN--FDAIILATGYRSNVPSW--LKESEMFSRKDGLPRRPFPNGWKGE 384 (433)
Q Consensus 325 -v~~~~--------~---~~v~----~~~g~~~~--~D~vi~atG~~~~~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~ 384 (433)
+.++. . +.+. +.+|++++ +|.||+|+|+.|+. .+ +...++..+++|++.+| +.++|+.
T Consensus 348 ~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~-~~l~~~~~gl~~~~~G~i~vd-~~~~ts~ 425 (598)
T 2x8g_A 348 VPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL-SKVLCETVGVKLDKNGRVVCT-DDEQTTV 425 (598)
T ss_dssp EEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG-GGTBCGGGCCCBCTTSCBCCC-TTSBCSS
T ss_pred eEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc-CccCchhcCceECCCCcEEeC-CCCcCCC
Confidence 34442 1 2332 35776654 99999999999998 44 35557777778999999 5678999
Q ss_pred CceEEeeecccc----cccchhhHHHHHHHHHhh
Q 013943 385 SGLYSVGFTKRG----LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 385 ~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~~ 414 (433)
|+|||+|||+.+ +..|..+|+.+|.+|.+.
T Consensus 426 ~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 426 SNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp TTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 999999999532 346899999999999864
No 82
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.95 E-value=1.7e-29 Score=252.05 Aligned_cols=303 Identities=15% Similarity=0.140 Sum_probs=192.0
Q ss_pred ccCCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCceeeec--CC--ceeecCCCCCCC---CC
Q 013943 30 CICVPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLRLHL--PK--QFCELPLMGFPS---EF 100 (433)
Q Consensus 30 ~~~~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~~~~--~~--~~~~~~~~~~~~---~~ 100 (433)
+...+||+|||||++|+++|..|++. +.+|+|||+++.++- ............ +. ....+..++... .+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYF 85 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhcccccccccccccccc
Confidence 34568999999999999999999887 789999999976541 111000000000 00 000000000000 00
Q ss_pred ---CCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 101 ---PTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 101 ---~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
..+....++.. ..+.+++++.+++|+.++... . +|++.+| ..+.||+||+||| ++|+.
T Consensus 86 ~~~~~~~~~~~l~~-----~~~~gv~~~~g~~v~~id~~~--~--~V~~~~g--------~~i~yd~lviATG--s~p~~ 146 (493)
T 1m6i_A 86 QPPSFYVSAQDLPH-----IENGGVAVLTGKKVVQLDVRD--N--MVKLNDG--------SQITYEKCLIATG--GTPRS 146 (493)
T ss_dssp SCGGGSBCTTTTTT-----STTCEEEEEETCCEEEEEGGG--T--EEEETTS--------CEEEEEEEEECCC--EEECC
T ss_pred cchHhhcchhhhhh-----hhcCCeEEEcCCEEEEEECCC--C--EEEECCC--------CEEECCEEEECCC--CCCCC
Confidence 00011111100 123467788899999998754 3 3777765 6899999999999 77877
Q ss_pred CCccCCCC--CCCceeeccCCCC-----CCCCCCCeEEEECCCCcHHHHHHHHhc----cCCCcEEEEecCcceeccccc
Q 013943 178 PEIEGSDE--FGGDIRHTSLYKS-----GEDFRGKRVLVVGCGNSGMEVCLDLCN----HDAMPSLVVRDTVHVLPQEML 246 (433)
Q Consensus 178 p~~~g~~~--~~~~~~~~~~~~~-----~~~~~~~~v~VvG~G~~a~e~a~~l~~----~g~~Vtl~~r~~~~~lp~~~~ 246 (433)
|++++... +...+.......+ .....+++++|||+|.+|+|+|..|++ .|.+|+++.+.+ ..+++
T Consensus 147 ~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~-~~~~~--- 222 (493)
T 1m6i_A 147 LSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK-GNMGK--- 222 (493)
T ss_dssp CHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS-STTTT---
T ss_pred CCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc-ccccc---
Confidence 76654211 0011111111111 011247899999999999999999987 467899887765 22111
Q ss_pred CCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--
Q 013943 247 GKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-- 324 (433)
Q Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 324 (433)
.+++...+ .+.+.+++.+|+++.+
T Consensus 223 -------------~l~~~~~~-----------------------------------------~~~~~l~~~GV~v~~~~~ 248 (493)
T 1m6i_A 223 -------------ILPEYLSN-----------------------------------------WTMEKVRREGVKVMPNAI 248 (493)
T ss_dssp -------------TSCHHHHH-----------------------------------------HHHHHHHTTTCEEECSCC
T ss_pred -------------cCCHHHHH-----------------------------------------HHHHHHHhcCCEEEeCCE
Confidence 11111111 1124466678888876
Q ss_pred ceEEeC--C--eEEEcCCcEecccEEEEccCCCCCCCCccccccccccC-CCCcCCCCCCCCCCCCceEEeeecccc---
Q 013943 325 IKRLKR--Y--AVEFVNGRCENFDAIILATGYRSNVPSWLKESEMFSRK-DGLPRRPFPNGWKGESGLYSVGFTKRG--- 396 (433)
Q Consensus 325 v~~~~~--~--~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~~iya~Gd~~~~--- 396 (433)
|.++.. + .+.+.+|+++++|.||+|+|+.|+. .+++..++..++ +|.+++| +.+++ .|+|||+|||+..
T Consensus 249 V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~-~l~~~~gl~~~~~~ggi~Vd-~~l~t-~~~IyA~GD~a~~~~~ 325 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV-ELAKTGGLEIDSDFGGFRVN-AELQA-RSNIWVAGDAACFYDI 325 (493)
T ss_dssp EEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC-TTHHHHTCCBCTTTCSEECC-TTCEE-ETTEEECGGGEEEEET
T ss_pred EEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH-HHHHHcCCccccCCCcEEEC-CCccc-CCCeeEeeeeEeccCc
Confidence 777753 2 3677899999999999999999998 577777876654 5778888 45666 6999999999852
Q ss_pred ---------cccchhhHHHHHHHHHhh
Q 013943 397 ---------LLGVAMDAKRIAQDIESC 414 (433)
Q Consensus 397 ---------~~~a~~~g~~~a~~i~~~ 414 (433)
+..|..+|+.+|.+|.+.
T Consensus 326 ~~g~~~~~~~~~A~~qg~~aa~ni~g~ 352 (493)
T 1m6i_A 326 KLGRRRVEHHDHAVVSGRLAGENMTGA 352 (493)
T ss_dssp TTEEECCCCHHHHHHHHHHHHHHHTSC
T ss_pred ccCccccchHHHHHHHHHHHHHHhcCC
Confidence 126899999999999865
No 83
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=4.7e-28 Score=260.42 Aligned_cols=279 Identities=16% Similarity=0.154 Sum_probs=189.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI-PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
..+||+|||||+||+++|..|++.|+ +|+|||+.+.+||.+... ++ .+....++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip---------~~~~~~~~~ 241 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IP---------QFRLPYDVV 241 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SC---------TTTSCHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CC---------cccCCHHHH
Confidence 35899999999999999999999999 799999999899875331 11 111223466
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCc-cCCCCCCCc
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEI-EGSDEFGGD 189 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~-~g~~~~~~~ 189 (433)
++..+++++.++++++++.+.. .. +++.++ ..+.||+||+|||. ..|+.+++ +|.....+
T Consensus 242 ~~~~~~~~~~gv~~~~~~~v~~-------~~--v~~~~~--------~~~~~d~vvlAtGa-~~p~~l~~~~G~~~~~g- 302 (1025)
T 1gte_A 242 NFEIELMKDLGVKIICGKSLSE-------NE--ITLNTL--------KEEGYKAAFIGIGL-PEPKTDDIFQGLTQDQG- 302 (1025)
T ss_dssp HHHHHHHHTTTCEEEESCCBST-------TS--BCHHHH--------HHTTCCEEEECCCC-CEECCCGGGTTCCTTTT-
T ss_pred HHHHHHHHHCCcEEEcccEecc-------ce--EEhhhc--------CccCCCEEEEecCC-CCCCCCCCCCCCCCCCC-
Confidence 6667778888999888876621 11 333332 34679999999994 24665544 35432222
Q ss_pred eeeccCC--------------CC-CCCCCCCeEEEECCCCcHHHHHHHHhccCC-CcEEEEecCcceecccccCCcchhh
Q 013943 190 IRHTSLY--------------KS-GEDFRGKRVLVVGCGNSGMEVCLDLCNHDA-MPSLVVRDTVHVLPQEMLGKSTFGL 253 (433)
Q Consensus 190 ~~~~~~~--------------~~-~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~-~Vtl~~r~~~~~lp~~~~~~~~~~~ 253 (433)
+++..++ .. .....+++|+|||+|++|+|+|..+.+.|. +||+++|++...+|..+. .
T Consensus 303 v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~-----e- 376 (1025)
T 1gte_A 303 FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE-----E- 376 (1025)
T ss_dssp EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH-----H-
T ss_pred EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH-----H-
Confidence 2221111 11 112346799999999999999999999996 899999987434442211 0
Q ss_pred hHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEe--
Q 013943 254 SMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLK-- 329 (433)
Q Consensus 254 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~-- 329 (433)
.+.+++.+|+++.. +.++.
T Consensus 377 ---------------------------------------------------------~~~~~~~Gv~~~~~~~~~~i~~~ 399 (1025)
T 1gte_A 377 ---------------------------------------------------------VELAKEEKCEFLPFLSPRKVIVK 399 (1025)
T ss_dssp ---------------------------------------------------------HHHHHHTTCEEECSEEEEEEEEE
T ss_pred ---------------------------------------------------------HHHHHHcCCEEEeCCCceEEEcc
Confidence 01122234444433 22222
Q ss_pred CCe---EEEc-------------CC--cEecccEEEEccCCCCCCCCccccc-cccccCCCCcCCCCCCCCCCCCceEEe
Q 013943 330 RYA---VEFV-------------NG--RCENFDAIILATGYRSNVPSWLKES-EMFSRKDGLPRRPFPNGWKGESGLYSV 390 (433)
Q Consensus 330 ~~~---v~~~-------------~g--~~~~~D~vi~atG~~~~~~~~~~~~-~l~~~~~g~~~~~~~~~~~~~~~iya~ 390 (433)
++. +.+. +| .++++|.||+|+|+.|+...|+.+. ++..+++|++.+|...++|+.|+|||+
T Consensus 400 ~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~ 479 (1025)
T 1gte_A 400 GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAG 479 (1025)
T ss_dssp TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEEC
T ss_pred CCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEe
Confidence 111 1111 12 3689999999999987654676664 777777899999954788999999999
Q ss_pred eecccc---cccchhhHHHHHHHHHhhhc
Q 013943 391 GFTKRG---LLGVAMDAKRIAQDIESCWK 416 (433)
Q Consensus 391 Gd~~~~---~~~a~~~g~~~a~~i~~~l~ 416 (433)
||++.. +..|..+|+.+|.+|.++|.
T Consensus 480 GD~~~~~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 480 GDIVGMANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp SGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999974 44789999999999998775
No 84
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.95 E-value=1.8e-28 Score=241.75 Aligned_cols=299 Identities=19% Similarity=0.139 Sum_probs=189.9
Q ss_pred CCCeEEECCChHHHHHHHHHHH-c------CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKE-R------GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPS 105 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~-~------g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (433)
.+||+|||||++|+.+|..|++ . +.+|+|||+.+.++|.|..... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 5789999999999999999999 7 8999999999888888754211 12234
Q ss_pred HHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC-CccCCccCCC
Q 013943 106 KQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE-AVVPEIEGSD 184 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~-p~~p~~~g~~ 184 (433)
..++..++.+++.+.+++++.+..+ + .. |++.++ .+.||+||+||| +. ++.+++||.+
T Consensus 60 ~~~~~~~~~~~~~~~~v~~~~~v~v------~--~~--v~~~~~---------~~~~d~lViAtG--~~~~~~~~ipG~~ 118 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRFFGNVVV------G--EH--VQPGEL---------SERYDAVIYAVG--AQSDRMLNIPGED 118 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEEEESCCB------T--TT--BCHHHH---------HHHSSEEEECCC--CCEECCCCCTTTT
T ss_pred HHHHHHHHHHHHhcCCCEEEeeEEE------C--CE--EEECCC---------eEeCCEEEEeeC--CCCCCCCCCCCCC
Confidence 4566777777777777777766443 1 11 333332 468999999999 54 6667788875
Q ss_pred CCCCceeeccCC-----------CCCCCCCCCeEEEECCCCcHHHHHHHHhcc--------------------C-CCcEE
Q 013943 185 EFGGDIRHTSLY-----------KSGEDFRGKRVLVVGCGNSGMEVCLDLCNH--------------------D-AMPSL 232 (433)
Q Consensus 185 ~~~~~~~~~~~~-----------~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~--------------------g-~~Vtl 232 (433)
+.+ +++...+ .+...+.+++|+|||+|++|+|+|..|++. + .+|++
T Consensus 119 -~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~l 196 (456)
T 1lqt_A 119 -LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVI 196 (456)
T ss_dssp -STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEE
T ss_pred -CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEE
Confidence 333 3332211 222234689999999999999999999974 4 58999
Q ss_pred EEecCcceeccccc-------CCcchhh---hHHHHhhcch--HHHHHHHHHHHHHhhccccccCCCCCCCCcccccccC
Q 013943 233 VVRDTVHVLPQEML-------GKSTFGL---SMWLLKWLPM--RLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLS 300 (433)
Q Consensus 233 ~~r~~~~~lp~~~~-------~~~~~~~---~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (433)
+.|++ ...+.... ..+.... ..-+...... ....+..+.....+
T Consensus 197 v~r~~-~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------------------- 252 (456)
T 1lqt_A 197 VGRRG-PLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVL----------------------- 252 (456)
T ss_dssp ECSSC-GGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHH-----------------------
T ss_pred EecCC-hhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHH-----------------------
Confidence 99988 33221100 0000000 0000000000 00011111111111
Q ss_pred CCccccCchhhhhhhc------CCeEEecC--ceEEeCC----eEEEc----------------CC--cEecccEEEEcc
Q 013943 301 GKTPVLDAGTLAKIKS------GHIRVFPG--IKRLKRY----AVEFV----------------NG--RCENFDAIILAT 350 (433)
Q Consensus 301 ~~~~~~~~~~~~~~~~------~~v~~~~~--v~~~~~~----~v~~~----------------~g--~~~~~D~vi~at 350 (433)
.+.+.+ .+|+++.+ +.++..+ ++.+. +| +++++|.||+|+
T Consensus 253 ----------~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~ 322 (456)
T 1lqt_A 253 ----------RGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSV 322 (456)
T ss_dssp ----------HHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECS
T ss_pred ----------HHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcc
Confidence 011112 46777665 5666543 25543 34 458999999999
Q ss_pred CCCCCCCCccccccccccCCCCcCCCCCCCC-CCCCceEEeeecccc----cccchhhHHHHHHHHHhhhcc
Q 013943 351 GYRSNVPSWLKESEMFSRKDGLPRRPFPNGW-KGESGLYSVGFTKRG----LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 351 G~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~-~~~~~iya~Gd~~~~----~~~a~~~g~~~a~~i~~~l~~ 417 (433)
|++|+. + .++..+++|.+++| +.++ ++.|+|||+|||+.+ +..|..+|..+|.+|...+..
T Consensus 323 G~~p~~--l---~gl~~d~~g~i~vn-~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 323 GYRGVP--T---PGLPFDDQSGTIPN-VGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp CEECCC--C---TTSCCBTTTTBCCE-ETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCC--C---CCCcccCCCCeeEC-CCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 999996 2 24444677888888 4444 789999999999864 235889999999999987754
No 85
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=4.7e-29 Score=258.67 Aligned_cols=277 Identities=16% Similarity=0.133 Sum_probs=201.4
Q ss_pred ccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 30 CICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 30 ~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
....+||+|||||++|+++|..|++.|++|+|||+++.+||.|.... ..+++....++
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~ 445 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRV 445 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHH
Confidence 34568999999999999999999999999999999999998765410 11222345677
Q ss_pred HHHHHHHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC------CccCCccC
Q 013943 110 VDYLEAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE------AVVPEIEG 182 (433)
Q Consensus 110 ~~~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~------p~~p~~~g 182 (433)
.+++...+.+. ++++++++++ +..++ ..+.||+||+|||...+ +..|+++|
T Consensus 446 ~~~~~~~~~~~~gv~~~~~~~v--------------~~~~~--------~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 446 KEYREAVLAELPNVEIYRESPM--------------TGDDI--------VEFGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHHHTCTTEEEESSCCC--------------CHHHH--------HHTTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHHHcCCCEEEECCee--------------cHHHH--------hhcCCCEEEEcCCCccccccccccCCCCCCC
Confidence 88888888776 7777766543 11221 45679999999994322 55777887
Q ss_pred CCCCCCceeeccCCCCCCCCCCCeEEEEC--CCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhh
Q 013943 183 SDEFGGDIRHTSLYKSGEDFRGKRVLVVG--CGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKW 260 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~ 260 (433)
.+. ..+++...+.......+++|+||| +|.+|+|+|..|.+.|.+|+++.+.+ .+++....
T Consensus 504 ~~~--~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~-------------- 566 (690)
T 3k30_A 504 AEG--MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNN-------------- 566 (690)
T ss_dssp CTT--SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGG--------------
T ss_pred CCC--CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-cccccccc--------------
Confidence 653 345555555444556678999999 99999999999999999999999887 33332110
Q ss_pred cchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEEc--
Q 013943 261 LPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEFV-- 336 (433)
Q Consensus 261 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~-- 336 (433)
+.....+.+.+++.+|+++.+ |.++..+++.+.
T Consensus 567 -------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~ 603 (690)
T 3k30_A 567 -------------------------------------------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDT 603 (690)
T ss_dssp -------------------------------------------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEET
T ss_pred -------------------------------------------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEc
Confidence 001112234566678999887 888988876553
Q ss_pred ---CCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc--cccchhhHHHHHHHH
Q 013943 337 ---NGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG--LLGVAMDAKRIAQDI 411 (433)
Q Consensus 337 ---~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~--~~~a~~~g~~~a~~i 411 (433)
+++++++|.||+|+|+.|+. .++.+++... . .++.|+||++|||+.. +..|..+|+.+|.+|
T Consensus 604 ~~~~~~~i~aD~VV~A~G~~p~~-~l~~~l~~~~----~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i 670 (690)
T 3k30_A 604 YASIERELECDAVVMVTARLPRE-ELYLDLVARR----D--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEF 670 (690)
T ss_dssp TTCCEEEEECSEEEEESCEEECC-HHHHHHHHHH----H--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHT
T ss_pred cCCeEEEEECCEEEECCCCCCCh-HHHHHHhhhh----c--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHH
Confidence 45579999999999999998 5665543321 1 5677999999999964 446999999999999
Q ss_pred Hhhhcc--CCchhh
Q 013943 412 ESCWKA--KAPFAR 423 (433)
Q Consensus 412 ~~~l~~--~~~~~~ 423 (433)
.+.+.. ..+|++
T Consensus 671 ~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 671 DAVLPSNDEVPFRR 684 (690)
T ss_dssp TCCCCCTTSCSSCC
T ss_pred HhhccCCCCCCcCh
Confidence 988765 334554
No 86
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=4.4e-28 Score=239.22 Aligned_cols=307 Identities=18% Similarity=0.150 Sum_probs=189.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
..+||+|||||++|+.+|..|++.| ++|+|||+.+.++|.|..... +.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 4589999999999999999999998 899999999988888755321 111233556
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC-ccCCccCCCCCCC
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA-VVPEIEGSDEFGG 188 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p-~~p~~~g~~~~~~ 188 (433)
..++.+++++.+++++.++.| . .. |++.+ ..+.||+||+||| +.+ +.|++||.+. .+
T Consensus 62 ~~~~~~~~~~~gv~~~~~~~v------~--~~--V~~~~---------~~~~~d~lVlAtG--s~~~~~~~ipG~~~-~g 119 (460)
T 1cjc_A 62 INTFTQTARSDRCAFYGNVEV------G--RD--VTVQE---------LQDAYHAVVLSYG--AEDHQALDIPGEEL-PG 119 (460)
T ss_dssp HHHHHHHHTSTTEEEEBSCCB------T--TT--BCHHH---------HHHHSSEEEECCC--CCEECCCCCTTTTS-TT
T ss_pred HHHHHHHHHhCCcEEEeeeEE------e--eE--EEecc---------ceEEcCEEEEecC--cCCCCCCCCCCCCC-Cc
Confidence 777777787788888777665 1 11 33332 2368999999999 554 6778888752 22
Q ss_pred ceeeccCC----------CCC-CCCCCCeEEEECCCCcHHHHHHHHh--------------------ccCC-CcEEEEec
Q 013943 189 DIRHTSLY----------KSG-EDFRGKRVLVVGCGNSGMEVCLDLC--------------------NHDA-MPSLVVRD 236 (433)
Q Consensus 189 ~~~~~~~~----------~~~-~~~~~~~v~VvG~G~~a~e~a~~l~--------------------~~g~-~Vtl~~r~ 236 (433)
+++...+ ... ....+++++|||+|++|+|+|..|+ +.+. +|+++.|+
T Consensus 120 -v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~ 198 (460)
T 1cjc_A 120 -VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRR 198 (460)
T ss_dssp -EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSS
T ss_pred -EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcC
Confidence 2322211 111 1236899999999999999999999 4565 79999998
Q ss_pred CcceecccccCCcchhhhHHHHhhcc--------hHH---------HHHHHHHHHHHhhccccccCCCCCCCCccccccc
Q 013943 237 TVHVLPQEMLGKSTFGLSMWLLKWLP--------MRL---------VDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNL 299 (433)
Q Consensus 237 ~~~~lp~~~~~~~~~~~~~~~~~~l~--------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (433)
+....+... .++.. +.. +| ..+ ..+..+.....+......+..
T Consensus 199 ~~~~~~ft~-----~el~~-l~~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------- 258 (460)
T 1cjc_A 199 GPLQVAFTI-----KELRE-MIQ-LPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPG------------- 258 (460)
T ss_dssp CGGGCCCCH-----HHHHH-HHT-CTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCC-------------
T ss_pred ChHhhccCH-----HHHHH-hhc-CCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccc-------------
Confidence 832111000 00000 000 00 000 000000000000000000000
Q ss_pred CCCccccCchh-hhhhhcCCeEEecC--ceEEeCC-------eEEEc---------------CC--cEecccEEEEccCC
Q 013943 300 SGKTPVLDAGT-LAKIKSGHIRVFPG--IKRLKRY-------AVEFV---------------NG--RCENFDAIILATGY 352 (433)
Q Consensus 300 ~~~~~~~~~~~-~~~~~~~~v~~~~~--v~~~~~~-------~v~~~---------------~g--~~~~~D~vi~atG~ 352 (433)
.... .......+|+++.. +.++..+ ++.+. +| +++++|.||+|+|+
T Consensus 259 -------~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 259 -------VEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp -------HHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred -------cccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 0000 00011146777665 5555432 24432 34 56999999999999
Q ss_pred CCCCCCccccccc-cccCCCCcCCCCCCCCCC-CCceEEeeeccccc----ccchhhHHHHHHHHHhhhcc
Q 013943 353 RSNVPSWLKESEM-FSRKDGLPRRPFPNGWKG-ESGLYSVGFTKRGL----LGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 353 ~~~~~~~~~~~~l-~~~~~g~~~~~~~~~~~~-~~~iya~Gd~~~~~----~~a~~~g~~~a~~i~~~l~~ 417 (433)
+|+. + .++ ..+++|.+++| +.++++ .|+|||+|||+.++ ..|..+|+.+|.+|...+..
T Consensus 332 ~p~~--l---~gl~~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 332 KSRP--I---DPSVPFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp ECCC--C---CTTSCCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--C---CCCcccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 9996 3 355 55667888888 567777 79999999999642 26899999999999988765
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.94 E-value=3.8e-28 Score=252.80 Aligned_cols=281 Identities=19% Similarity=0.225 Sum_probs=189.1
Q ss_pred ccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 30 CICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 30 ~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
....+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.... ..++......+
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~----------------------~~pg~~~~~~~ 443 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVA----------------------ALPGLGEWSYH 443 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHT----------------------TSTTCGGGHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecc----------------------cCCChHHHHHH
Confidence 35678999999999999999999999999999999999999875521 00111222344
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC------CccCCccCC
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE------AVVPEIEGS 183 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~------p~~p~~~g~ 183 (433)
.+++...++... ..+..++.+.. + .. ++..++ ..+.||+||+|||.... |..|++||.
T Consensus 444 ~~~~~~~i~~~~---~~~~~~v~i~~--~-~~--v~~~~~--------~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 444 RDYRETQITKLL---KKNKESQLALG--Q-KP--MTADDV--------LQYGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHHHH---HHSTTCEEECS--C-CC--CCHHHH--------HTSCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHHHhh---cccCCceEEEe--C-eE--Eehhhc--------cccCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 555555444330 00111222211 1 11 333332 45789999999994321 567788887
Q ss_pred CCCCCceeeccCCCCCCCCCCCeEEEEC--CCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhc
Q 013943 184 DEFGGDIRHTSLYKSGEDFRGKRVLVVG--CGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWL 261 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~v~VvG--~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l 261 (433)
+.+...+.+..++.......+++|+||| +|.+|+|+|..|++.|.+||++.+.+ +++......
T Consensus 508 ~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~~------------- 572 (729)
T 1o94_A 508 DASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFTL------------- 572 (729)
T ss_dssp CTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHTT-------------
T ss_pred cccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--ccccccccc-------------
Confidence 6443445555444444445688999999 99999999999999999999999887 322110000
Q ss_pred chHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEEc---
Q 013943 262 PMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEFV--- 336 (433)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~~--- 336 (433)
....+.+.+++.+|+++.+ +.++..+++.+.
T Consensus 573 --------------------------------------------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~ 608 (729)
T 1o94_A 573 --------------------------------------------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIW 608 (729)
T ss_dssp --------------------------------------------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETT
T ss_pred --------------------------------------------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEec
Confidence 0011124455678888887 788887765542
Q ss_pred -CC-cE------------------ecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc
Q 013943 337 -NG-RC------------------ENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG 396 (433)
Q Consensus 337 -~g-~~------------------~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~ 396 (433)
++ ++ +++|.||+|+|+.|+. .++.+++. .+| +.++|+.|+||++|||+..
T Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~-~l~~~l~~--------~vd-~~~~t~~~~VyAiGD~~~~ 678 (729)
T 1o94_A 609 GDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC-TLWNELKA--------RES-EWAENDIKGIYLIGDAEAP 678 (729)
T ss_dssp CSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC-HHHHHHHH--------TGG-GTGGGTCCEEEECGGGTSC
T ss_pred CCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh-HHHHHHhh--------hcc-cccccCCCCeEEEeCccch
Confidence 32 22 8999999999999998 56554432 133 4567888999999999863
Q ss_pred --cccchhhHHHHHHHHHhhhcc
Q 013943 397 --LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 397 --~~~a~~~g~~~a~~i~~~l~~ 417 (433)
+..|..+|+.+|.+|.+.+..
T Consensus 679 ~~~~~A~~~G~~aA~~i~~~l~~ 701 (729)
T 1o94_A 679 RLIADATFTGHRVAREIEEANPQ 701 (729)
T ss_dssp CCHHHHHHHHHHHHHTTTSSCTT
T ss_pred hhHHHHHHHHHHHHHHhhhhccc
Confidence 446999999999999887653
No 88
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.94 E-value=1.9e-28 Score=240.93 Aligned_cols=287 Identities=14% Similarity=0.121 Sum_probs=186.9
Q ss_pred CCCeEEECCChHHHHHHHHHHH--cCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKE--RGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~--~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
++||+|||||++|+++|..|++ .+++|+|||+++.++...... .. . .+....+++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~---~~----~---------------~g~~~~~~~~ 59 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP---HL----A---------------MGWRKFEDIS 59 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH---HH----H---------------HTCSCGGGSE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc---hh----c---------------cCccCHHHHH
Confidence 4789999999999999999999 789999999998654311000 00 0 0000111111
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
..+.+++++.+++++. .+|+.++.+. . ++.+.++ ..+.||+||+||| +++..|.+ .. .+..
T Consensus 60 ~~~~~~~~~~gv~~~~-~~v~~id~~~--~--~v~~~~g--------~~i~~d~liiAtG--~~~~~pg~---~~-~g~~ 120 (430)
T 3h28_A 60 VPLAPLLPKFNIEFIN-EKAESIDPDA--N--TVTTQSG--------KKIEYDYLVIATG--PKLVFGAE---GQ-EENS 120 (430)
T ss_dssp EESTTTGGGGTEEEEC-SCEEEEETTT--T--EEEETTC--------CEEECSEEEECCC--CEEECCSB---TH-HHHS
T ss_pred HHHHHHHHhcCCEEEE-EEEEEEECCC--C--EEEECCC--------cEEECCEEEEcCC--cccccCCC---CC-cCCc
Confidence 2222334455777765 4888887654 3 3666665 5799999999999 66666532 11 0111
Q ss_pred eeccCCCCCCC--------CCCCeEEEECCCCcH------HHHHHHH----hccC----CCcEEEEecCcceecccccCC
Q 013943 191 RHTSLYKSGED--------FRGKRVLVVGCGNSG------MEVCLDL----CNHD----AMPSLVVRDTVHVLPQEMLGK 248 (433)
Q Consensus 191 ~~~~~~~~~~~--------~~~~~v~VvG~G~~a------~e~a~~l----~~~g----~~Vtl~~r~~~~~lp~~~~~~ 248 (433)
.+.+...+... ..+++++|||+|++| +|+|..+ .+.| .+|+++.+.+ .+.+....+.
T Consensus 121 ~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~-~~~~~~l~~~ 199 (430)
T 3h28_A 121 TSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVGGI 199 (430)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTTCS
T ss_pred cCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc-cccccccCcc
Confidence 11111111100 114467899987664 8888554 4455 4788887766 2211000000
Q ss_pred cchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ce
Q 013943 249 STFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IK 326 (433)
Q Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~ 326 (433)
+.....+.+.+++.+|+++.+ |.
T Consensus 200 -------------------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~ 224 (430)
T 3h28_A 200 -------------------------------------------------------GASKRLVEDLFAERNIDWIANVAVK 224 (430)
T ss_dssp -------------------------------------------------------TTHHHHHHHHHHHTTCEEECSCEEE
T ss_pred -------------------------------------------------------hHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 001122235566789999987 89
Q ss_pred EEeCCeEEEcC----CcEecccEEEEccCCCCCCCCcccc--ccccccCCC-CcCCCCCCCCC-CCCceEEeeecccc--
Q 013943 327 RLKRYAVEFVN----GRCENFDAIILATGYRSNVPSWLKE--SEMFSRKDG-LPRRPFPNGWK-GESGLYSVGFTKRG-- 396 (433)
Q Consensus 327 ~~~~~~v~~~~----g~~~~~D~vi~atG~~~~~~~~~~~--~~l~~~~~g-~~~~~~~~~~~-~~~~iya~Gd~~~~-- 396 (433)
+++.+++.+++ ++++++|.||+|+|+.++. ++.+ .++ .+++| ++.+| +.+++ +.|+|||+|||+..
T Consensus 225 ~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~--~l~~~~~gl-~~~~G~~i~Vd-~~l~t~~~~~Ifa~GD~~~~~~ 300 (430)
T 3h28_A 225 AIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPE--VVASAGDKV-ANPANKMVIVN-RCFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp EECSSEEEEECTTSCEEEEECSEEEEECEEECCH--HHHTTCTTT-BCTTTCCBCCC-TTSBCSSSTTEEECSTTBCCCC
T ss_pred EEeCCeEEEEecCCCceEEeeeEEEECCCCccch--hHhhccccC-cCCCCCEEecC-ccccCCCCCCEEEEEeeeccCC
Confidence 99988888877 7789999999999999874 4554 366 45788 89999 45565 89999999999863
Q ss_pred -------------cccchhhHHHHHHHHHhhhccCCc
Q 013943 397 -------------LLGVAMDAKRIAQDIESCWKAKAP 420 (433)
Q Consensus 397 -------------~~~a~~~g~~~a~~i~~~l~~~~~ 420 (433)
...|..+|+.+|++|.+.+....+
T Consensus 301 ~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~ 337 (430)
T 3h28_A 301 IEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp SSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 236899999999999999987543
No 89
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.94 E-value=2e-26 Score=246.21 Aligned_cols=284 Identities=15% Similarity=0.136 Sum_probs=194.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|.. . + +.. + .+ ....++..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~-------k~~--i---------~~-~~~~~~~~ 185 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-A-------GEQ--I---------DG-MDSSAWIE 185 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-S-------CCE--E---------TT-EEHHHHHH
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-C-------ccc--c---------CC-CCHHHHHH
Confidence 3589999999999999999999999999999999999988762 1 1 000 0 00 12345555
Q ss_pred HHHHHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCC-------CceeEEEEeCEEEEccCCCCCCccCCccCC
Q 013943 112 YLEAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKC-------GVEEMEYRCRWLVVATGENAEAVVPEIEGS 183 (433)
Q Consensus 112 ~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~-------~~~~~~~~~d~viiAtG~~~~p~~p~~~g~ 183 (433)
.+.+.+.+. +++++.+++|+.++... ....+......... ..+...+.||+||+||| +.|+.|++||.
T Consensus 186 ~~~~~l~~~~~v~~~~~~~V~~i~~~~--~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATG--s~p~~~~ipG~ 261 (965)
T 2gag_A 186 QVTSELAEAEETTHLQRTTVFGSYDAN--YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATG--AHERPIVFENN 261 (965)
T ss_dssp HHHHHHHHSTTEEEESSEEEEEEETTT--EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCC--EEECCCCCBTC
T ss_pred HHHHHHhhcCCcEEEeCCEEEeeecCC--ceeeeEeecccccccccccCCCCceEEEECCEEEECCC--CccCCCCCCCC
Confidence 555556664 78888898898876432 11111110000000 11225799999999999 77888888887
Q ss_pred CCCCCceeecc---CCCCC-CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHh
Q 013943 184 DEFGGDIRHTS---LYKSG-EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLK 259 (433)
Q Consensus 184 ~~~~~~~~~~~---~~~~~-~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~ 259 (433)
+. .+ +++.. .+... ....+++++|||+|++|+|+|..|.+.|.+|+++.+++ ++++.
T Consensus 262 ~~-~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~-~~~~~---------------- 322 (965)
T 2gag_A 262 DR-PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS-SISAA---------------- 322 (965)
T ss_dssp CS-TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS-SCCHH----------------
T ss_pred CC-CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC-ccchh----------------
Confidence 54 22 22221 11111 22356899999999999999999999999999999887 22110
Q ss_pred hcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeC--C----
Q 013943 260 WLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKR--Y---- 331 (433)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~--~---- 331 (433)
.+.+++.+|+++.+ +.++.. +
T Consensus 323 ---------------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~ 351 (965)
T 2gag_A 323 ---------------------------------------------------AAQAVADGVQVISGSVVVDTEADENGELS 351 (965)
T ss_dssp ---------------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSCEE
T ss_pred ---------------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCCEE
Confidence 12344567777776 666654 2
Q ss_pred eEEEcC-------C--cEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCC----CCCCCceEEeeecccc--
Q 013943 332 AVEFVN-------G--RCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNG----WKGESGLYSVGFTKRG-- 396 (433)
Q Consensus 332 ~v~~~~-------g--~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~----~~~~~~iya~Gd~~~~-- 396 (433)
++.+.+ | +++++|.||+|+|+.|+. .++... +|.+.+|.... .++.|+|||+|||+..
T Consensus 352 ~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~-~l~~~~------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~ 424 (965)
T 2gag_A 352 AIVVAELDEARELGGTQRFEADVLAVAGGFNPVV-HLHSQR------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLD 424 (965)
T ss_dssp EEEEEEECTTCCEEEEEEEECSEEEEECCEEECC-HHHHHT------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCS
T ss_pred EEEEEeccccCCCCceEEEEcCEEEECCCcCcCh-HHHHhC------CCcEEEcCcccccccCCCCCCEEEEEecCCchh
Confidence 466654 4 569999999999999998 454332 34455552221 2788999999999964
Q ss_pred cccchhhHHHHHHHHHhhhcc
Q 013943 397 LLGVAMDAKRIAQDIESCWKA 417 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~l~~ 417 (433)
+..|..+|+.+|.+|.+.+..
T Consensus 425 l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 425 TASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 347899999999999988764
No 90
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.93 E-value=3e-26 Score=237.08 Aligned_cols=282 Identities=16% Similarity=0.247 Sum_probs=183.7
Q ss_pred ccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHH
Q 013943 30 CICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 30 ~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (433)
....+||+|||||++|+.+|..|++.|++|+|||+++.+||.|.... ..++.....++
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~----------------------~~~~~~~~~~~ 427 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK----------------------QIPGKEEFYET 427 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT----------------------TSTTCTTHHHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc----------------------cCCCHHHHHHH
Confidence 34578999999999999999999999999999999999998764310 01111233456
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEE-EeCEEEEccCCCCCCccCCccCCCCCCC
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEY-RCRWLVVATGENAEAVVPEIEGSDEFGG 188 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~-~~d~viiAtG~~~~p~~p~~~g~~~~~~ 188 (433)
..++.+.+++.++++++++.|+. ..+ .||+||+||| ++|..|+++|.+. .
T Consensus 428 ~~~~~~~~~~~gv~~~~~~~v~~-------------------------~~~~~~d~lviAtG--~~p~~~~i~G~~~--~ 478 (671)
T 1ps9_A 428 LRYYRRMIEVTGVTLKLNHTVTA-------------------------DQLQAFDETILASG--IVPRTPPIDGIDH--P 478 (671)
T ss_dssp HHHHHHHHHHHTCEEEESCCCCS-------------------------SSSCCSSEEEECCC--EEECCCCCBTTTS--T
T ss_pred HHHHHHHHHHcCCEEEeCcEecH-------------------------HHhhcCCEEEEccC--CCcCCCCCCCCCC--C
Confidence 66777778888988888765411 112 7899999999 7889998988754 2
Q ss_pred ceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC--cceecccccCCcchhhhHHHHhhcchHHH
Q 013943 189 DIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT--VHVLPQEMLGKSTFGLSMWLLKWLPMRLV 266 (433)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~--~~~lp~~~~~~~~~~~~~~~~~~l~~~~~ 266 (433)
.+++..+........+++|+|||+|.+|+|+|..|++.|.+|+++...- .|-...... ...
T Consensus 479 ~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~-----~~~------------ 541 (671)
T 1ps9_A 479 KVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ-----QAG------------ 541 (671)
T ss_dssp TEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC-----SGG------------
T ss_pred cEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc-----ccc------------
Confidence 3445444444444568999999999999999999999998777421000 000000000 000
Q ss_pred HHHHHHHHHHhhcccc--ccCCCCCCCCcccccc-----cC-CCccccCchhhhhhhcCCeEEecC--ceEEeCCeEEE-
Q 013943 267 DKLLLVVSWLMLGDTA--RFGLDRPLLGPLQLKN-----LS-GKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRYAVEF- 335 (433)
Q Consensus 267 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~~v~~- 335 (433)
... ......+. ..+.+.. .. .-.+.......+.+++.+|+++.+ +.+++++++.+
T Consensus 542 -------------~~~~~~~~~~~~~-~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~ 607 (671)
T 1ps9_A 542 -------------GLSPQGMQIPRSP-RQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV 607 (671)
T ss_dssp -------------GBCTTCCCCCCCS-SEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE
T ss_pred -------------cccccccccCCCC-cEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe
Confidence 000 00000000 0000000 00 000111122345677789999987 88888888777
Q ss_pred cCC--cEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCCCCCCCCCceEEeeecccc----cccchhhHHHHHH
Q 013943 336 VNG--RCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRG----LLGVAMDAKRIAQ 409 (433)
Q Consensus 336 ~~g--~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~----~~~a~~~g~~~a~ 409 (433)
.+| +++++|.||+|+|+.|+. .+++++. . ..++||++|||+.. +..|..+|..+|.
T Consensus 608 ~~G~~~~i~~D~Vi~a~G~~p~~-~l~~~l~----~-------------~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~ 669 (671)
T 1ps9_A 608 INGETQVLAVDNVVICAGQEPNR-ALAQPLI----D-------------SGKTVHLIGGCDVAMELDARRAIAQGTRLAL 669 (671)
T ss_dssp ETTEEEEECCSEEEECCCEEECC-TTHHHHH----T-------------TTCCEEECGGGTCCSSCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCEEEECCCccccH-HHHHHHH----h-------------cCCCEEEECCcCccCchhHHHHHHHHHHHHH
Confidence 677 569999999999999998 5555431 1 11689999999863 3468999999988
Q ss_pred HH
Q 013943 410 DI 411 (433)
Q Consensus 410 ~i 411 (433)
+|
T Consensus 670 ~i 671 (671)
T 1ps9_A 670 EI 671 (671)
T ss_dssp HC
T ss_pred hC
Confidence 75
No 91
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.92 E-value=3.4e-26 Score=222.88 Aligned_cols=289 Identities=17% Similarity=0.136 Sum_probs=181.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
++|||||||+||+++|..|++.+ .+|+|||+++.+..+... .... . +....+++..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~-------~~v~------~---------g~~~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMS-------NEVI------G---------GDRELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTH-------HHHH------H---------TSSCGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCH-------HHHh------c---------CCCCHHHHhh
Confidence 57999999999999999999876 589999998743211000 0000 0 0000001100
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCc-e
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGD-I 190 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~-~ 190 (433)
.+. .+...++++..+ +|+.++.+. +. +.+.++ .++.||+||+||| +++.++.++|.....+. .
T Consensus 61 ~~~-~~~~~gv~~i~~-~v~~id~~~--~~--v~~~~g--------~~i~yd~LviAtG--~~~~~~~i~G~~e~~~~~~ 124 (401)
T 3vrd_B 61 GYD-GLRAHGIQVVHD-SALGIDPDK--KL--VKTAGG--------AEFAYDRCVVAPG--IDLLYDKIEGYSEALAAKL 124 (401)
T ss_dssp CSH-HHHHTTCEEECS-CEEEEETTT--TE--EEETTS--------CEEECSEEEECCC--EEECGGGSBTCCSGGGGTS
T ss_pred CHH-HHHHCCCEEEEe-EEEEEEccC--cE--EEeccc--------ceeecceeeeccC--CccccCCccCchhhcccCc
Confidence 011 123457776544 799998766 33 667776 7899999999999 88888888887653221 1
Q ss_pred eeccCCCCC--------CCCCCCeEEEECCCCc-----------HHHHHHHHhccC--CCcEEEEecCcceecccccCCc
Q 013943 191 RHTSLYKSG--------EDFRGKRVLVVGCGNS-----------GMEVCLDLCNHD--AMPSLVVRDTVHVLPQEMLGKS 249 (433)
Q Consensus 191 ~~~~~~~~~--------~~~~~~~v~VvG~G~~-----------a~e~a~~l~~~g--~~Vtl~~r~~~~~lp~~~~~~~ 249 (433)
.++....+. ........+|+++|.. +.+++..+.+.+ .+|+++.+.+. +.+..
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~-~~~~~----- 198 (401)
T 3vrd_B 125 PHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQT-FSKQA----- 198 (401)
T ss_dssp CCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSS-CTTHH-----
T ss_pred cceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccc-ccccc-----
Confidence 222111110 0122334444444332 345555555554 57888776652 11100
Q ss_pred chhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceE
Q 013943 250 TFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKR 327 (433)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~ 327 (433)
.+...+. ..+.+.+++.+|+++.+ +..
T Consensus 199 ------------------~~~~~~~---------------------------------~~~~~~l~~~gi~v~~~~~v~~ 227 (401)
T 3vrd_B 199 ------------------QFTKGWE---------------------------------RLYGFGTENALIEWHPGPDAAV 227 (401)
T ss_dssp ------------------HHHHHHH---------------------------------HHSCTTSTTCSEEEECTTTTCE
T ss_pred ------------------cccHHHH---------------------------------HHHHHHHHhcCcEEEeCceEEE
Confidence 0000000 01123455678888876 555
Q ss_pred EeC----CeEEEcCCcEecccEEEEccCCCCCCCCccccccccccCCCCcCCCCC-CCCCCCCceEEeeecccc------
Q 013943 328 LKR----YAVEFVNGRCENFDAIILATGYRSNVPSWLKESEMFSRKDGLPRRPFP-NGWKGESGLYSVGFTKRG------ 396 (433)
Q Consensus 328 ~~~----~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~~iya~Gd~~~~------ 396 (433)
++. ..+.+.+|+++++|.+++++|.+|+ .++.+.++. +++|++.+|.. ++.++.|||||+|||+..
T Consensus 228 v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~--~~~~~~gl~-~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~ 304 (401)
T 3vrd_B 228 VKTDTEAMTVETSFGETFKAAVINLIPPQRAG--KIAQSASLT-NDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKS 304 (401)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEEC--HHHHHTTCC-CTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBS
T ss_pred EEecccceEEEcCCCcEEEeeEEEEecCcCCc--hhHhhcccc-ccCCCEEECCCcceecCCCCEEEecccccCCCCCch
Confidence 542 2588899999999999999999987 477777875 58999999854 456889999999999853
Q ss_pred cccchhhHHHHHHHHHhhhccCCc
Q 013943 397 LLGVAMDAKRIAQDIESCWKAKAP 420 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~l~~~~~ 420 (433)
...|..||+.+|++|.+.++...+
T Consensus 305 a~~A~~qa~v~A~ni~~~l~G~~~ 328 (401)
T 3vrd_B 305 AYSANSQAKVAAAAVVALLKGEEP 328 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 236789999999999999986543
No 92
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=4.1e-25 Score=220.42 Aligned_cols=255 Identities=19% Similarity=0.200 Sum_probs=175.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
.+||+|||||++|+++|..|++. ++|+|||+++.+||.|....+. .+. ++. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g---------~~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEG---------FNK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETT---------TTE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCC---------CCC--CHHHHHHH
Confidence 47999999999999999999999 9999999999999887653210 000 011 23444444
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCceee
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIRH 192 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~~ 192 (433)
+.+.+ +.+++++++++|.+++... ..|.+...+ .++...+.||+||+||| +.+..|+++|.+. .+ ++.
T Consensus 167 l~~~l-~~~v~~~~~~~v~~i~~~~--~~~~~~~~~-----~~~~~~~~~d~lvlAtG--a~~~~~~~~g~~~-~g-v~~ 234 (493)
T 1y56_A 167 LVGKL-NENTKIYLETSALGVFDKG--EYFLVPVVR-----GDKLIEILAKRVVLATG--AIDSTMLFENNDM-PG-VFR 234 (493)
T ss_dssp HHHTC-CTTEEEETTEEECCCEECS--SSEEEEEEE-----TTEEEEEEESCEEECCC--EEECCCCCTTTTS-TT-EEE
T ss_pred HHHHH-hcCCEEEcCCEEEEEEcCC--cEEEEEEec-----CCeEEEEECCEEEECCC--CCccCCCCCCCCC-CC-EEE
Confidence 43333 4467778888998888766 445444322 12234799999999999 7788888888653 22 222
Q ss_pred ccCC---CCC-CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHH
Q 013943 193 TSLY---KSG-EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDK 268 (433)
Q Consensus 193 ~~~~---~~~-~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~ 268 (433)
.... ... ....+++++|||+|.+|+| ..+.+.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~G----------------------------------------- 271 (493)
T 1y56_A 235 RDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWG----------------------------------------- 271 (493)
T ss_dssp HHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHT-----------------------------------------
T ss_pred cHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCC-----------------------------------------
Confidence 2111 111 1235689999999999998 2232222
Q ss_pred HHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC----eEEEcCCcEec
Q 013943 269 LLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY----AVEFVNGRCEN 342 (433)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~----~v~~~~g~~~~ 342 (433)
|+++.+ +.++..+ .+.+.+|++++
T Consensus 272 --------------------------------------------------V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~ 301 (493)
T 1y56_A 272 --------------------------------------------------IDYVHIPNVKRVEGNEKVERVIDMNNHEYK 301 (493)
T ss_dssp --------------------------------------------------CEEEECSSEEEEECSSSCCEEEETTCCEEE
T ss_pred --------------------------------------------------cEEEeCCeeEEEecCCceEEEEeCCCeEEE
Confidence 333322 3333322 25677888999
Q ss_pred ccEEEEccCCCCCCCCccccccccc--cCCCCcC-CCCCCCCCCCCceEEeeecccc--cccchhhHHHHHHHHHhhhc
Q 013943 343 FDAIILATGYRSNVPSWLKESEMFS--RKDGLPR-RPFPNGWKGESGLYSVGFTKRG--LLGVAMDAKRIAQDIESCWK 416 (433)
Q Consensus 343 ~D~vi~atG~~~~~~~~~~~~~l~~--~~~g~~~-~~~~~~~~~~~~iya~Gd~~~~--~~~a~~~g~~~a~~i~~~l~ 416 (433)
+|.||+|+|+.|+. .+++..++.. +++|++. +| +.++ +.|+||++|||+.. +..|..+|+.+|.+|.+.+.
T Consensus 302 aD~Vv~a~G~~p~~-~l~~~~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 302 VDALIFADGRRPDI-NPITQAGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp CSEEEECCCEEECC-HHHHHTTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eCEEEECCCcCcCc-hHHHhcCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999998 6777776543 3578765 66 4555 88999999999964 45789999999999998764
No 93
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.92 E-value=1.5e-26 Score=227.04 Aligned_cols=287 Identities=15% Similarity=0.144 Sum_probs=173.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
++|||||||+||+++|..|++.+ ++|+|||+++.+. |......... +....+++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~---------------g~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM---------------GWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH---------------TCSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc---------------CCCCHHHhhh
Confidence 57999999999999999999875 6899999987431 1000000000 0001111111
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCcee
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDIR 191 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~~ 191 (433)
.+.+++++.+++++.+ +|++++.+. +. |++++| +++.||+||+||| +++. +++||..... .
T Consensus 61 ~~~~~~~~~gv~~i~~-~v~~Id~~~--~~--V~~~~g--------~~i~YD~LViAtG--~~~~-~~i~G~~e~~---~ 121 (430)
T 3hyw_A 61 PLAPLLPKFNIEFINE-KAESIDPDA--NT--VTTQSG--------KKIEYDYLVIATG--PKLV-FGAEGQEENS---T 121 (430)
T ss_dssp ESTTTGGGGTEEEECS-CEEEEETTT--TE--EEETTC--------CEEECSEEEECCC--CEEE-CCSBTHHHHS---C
T ss_pred cHHHHHHHCCcEEEEe-EEEEEECCC--CE--EEECCC--------CEEECCEEEEeCC--CCcc-CCccCcccCc---C
Confidence 1122344457776554 799998766 33 777776 6899999999999 5543 3466653211 1
Q ss_pred eccCCCCC--------CCCCCCeEEEECCCC------cHHHHHHH----HhccC----CCcEEEEecCcceecccccCCc
Q 013943 192 HTSLYKSG--------EDFRGKRVLVVGCGN------SGMEVCLD----LCNHD----AMPSLVVRDTVHVLPQEMLGKS 249 (433)
Q Consensus 192 ~~~~~~~~--------~~~~~~~v~VvG~G~------~a~e~a~~----l~~~g----~~Vtl~~r~~~~~lp~~~~~~~ 249 (433)
..+...+. ....++.++|+|++. .+.|++.. +.+.+ .+|+++...+ .+ +......
T Consensus 122 ~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~-~l-~~~~~~~- 198 (430)
T 3hyw_A 122 SICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YL-GHFGVGG- 198 (430)
T ss_dssp CCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-ST-TCTTTTC-
T ss_pred CcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc-hh-hhccchh-
Confidence 11111100 001234556665542 12233333 33333 3566665444 11 1100000
Q ss_pred chhhhHHHHhhcchHHHHHHHHHHHHHhhccccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceE
Q 013943 250 TFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKR 327 (433)
Q Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~ 327 (433)
.+.....+.+.+++.+|+++.+ |++
T Consensus 199 -----------------------------------------------------~~~~~~~l~~~l~~~GV~~~~~~~v~~ 225 (430)
T 3hyw_A 199 -----------------------------------------------------IGASKRLVEDLFAERNIDWIANVAVKA 225 (430)
T ss_dssp -----------------------------------------------------STTHHHHHHHHHHHTTCEEECSCEEEE
T ss_pred -----------------------------------------------------hHHHHHHHHHHHHhCCeEEEeCceEEE
Confidence 0001111234566779999988 899
Q ss_pred EeCCeEEEcC----CcEecccEEEEccCCCCCCCCccccc--cccccCCCCcCCCCCCCCCCCCceEEeeeccccc----
Q 013943 328 LKRYAVEFVN----GRCENFDAIILATGYRSNVPSWLKES--EMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL---- 397 (433)
Q Consensus 328 ~~~~~v~~~~----g~~~~~D~vi~atG~~~~~~~~~~~~--~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~---- 397 (433)
++.+++.+++ ++++++|.+|+++|.+++. ++... .+..+.+|++++|..++.++.|||||+|||+..+
T Consensus 226 v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~--~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~ 303 (430)
T 3hyw_A 226 IEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPE--VVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEK 303 (430)
T ss_dssp ECSSEEEEECTTSCEEEEECSEEEEECEEECCH--HHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSC
T ss_pred EeCCceEEEeeCCCceEeecceEEEeccCCCch--HHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCccc
Confidence 9998887754 3479999999999999984 55544 3444456788888444458999999999998421
Q ss_pred -----------ccchhhHHHHHHHHHhhhccCC
Q 013943 398 -----------LGVAMDAKRIAQDIESCWKAKA 419 (433)
Q Consensus 398 -----------~~a~~~g~~~a~~i~~~l~~~~ 419 (433)
..|..||+.+|+||.+.++...
T Consensus 304 ~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 304 TPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2588999999999999988643
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.68 E-value=7.6e-20 Score=172.83 Aligned_cols=150 Identities=13% Similarity=0.022 Sum_probs=102.1
Q ss_pred CCCeEEECCChHHHHHHHHHHH--cCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKE--RGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~--~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
.+||+||||||+|++||..|++ .|++|+|||+.+.+||......+ ..+.... .
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~-----~~~~~~l--------------------~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ-----LFSAMVM--------------------R 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST-----TCCCEEE--------------------E
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc-----cCCHHHH--------------------H
Confidence 4899999999999999999975 49999999999989885432100 0000000 0
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCCCCCCCce
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGSDEFGGDI 190 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~~~~~~~~ 190 (433)
....+.+++.++++..+.. .....+.++++++ ..+..+.++|...+.+..
T Consensus 120 ~~~~~~~~e~Gv~~~~~~~----------------------------~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~ 169 (326)
T 3fpz_A 120 KPAHLFLQELEIPYEDEGD----------------------------YVVVKHAALFIST--VLSKVLQLPNVKLFNATC 169 (326)
T ss_dssp TTTHHHHHHTTCCCEECSS----------------------------EEEESCHHHHHHH--HHHHHHTSTTEEEETTEE
T ss_pred HHHHHHHHHcCCEEEECCc----------------------------ceecceeEEEEcc--hhhhccccccceeecccc
Confidence 0112334456666433210 2333445566666 555666677776665655
Q ss_pred eeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 191 RHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...+..++.....+++++|+|+|.++++.+..+...+.++++..+..
T Consensus 170 ~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 170 VEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp EEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred cceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 55555556666788999999999999999999999999999887665
No 95
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.66 E-value=2.7e-16 Score=152.28 Aligned_cols=187 Identities=16% Similarity=0.172 Sum_probs=114.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc---------cccCce-e-e-ecCCceee----------
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL---------KTYDRL-R-L-HLPKQFCE---------- 90 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~---------~~~~~~-~-~-~~~~~~~~---------- 90 (433)
.+||+|||||++|+++|..|++.|.+|+|+|+++.+|+.|.. +..... . + ..+.....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 489999999999999999999999999999999877654321 000000 0 0 00000000
Q ss_pred -----cCCCCCC--CCCCCCC--CHHHHHHHHHHHHHHcCCcceecceEEEEEEeCC--CCeEEEEEeecCcCCCceeEE
Q 013943 91 -----LPLMGFP--SEFPTYP--SKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDAT--IRFWRVKTTVGGQKCGVEEME 159 (433)
Q Consensus 91 -----~~~~~~~--~~~~~~~--~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~--~~~~~v~~~~g~~~~~~~~~~ 159 (433)
-...++. +.-.-|+ ...++.+++.+.+++.+++++++++|+++..+++ .+.|.|++.+ ..
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~---------g~ 154 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS---------TQ 154 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT---------EE
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC---------CE
Confidence 0000100 0000011 6788889999999999999999999999987610 1447776654 37
Q ss_pred EEeCEEEEccCCCCCCc------------------cCCccCCCCCCCceeeccC-C-CCCCC-CCCCeEEEEC-------
Q 013943 160 YRCRWLVVATGENAEAV------------------VPEIEGSDEFGGDIRHTSL-Y-KSGED-FRGKRVLVVG------- 211 (433)
Q Consensus 160 ~~~d~viiAtG~~~~p~------------------~p~~~g~~~~~~~~~~~~~-~-~~~~~-~~~~~v~VvG------- 211 (433)
+++|.||+|||..+.|. .|..|+...+ .++... . ..... ..+.++.|+|
T Consensus 155 i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~---~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~ 231 (401)
T 2gqf_A 155 WQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPF---TYRETDKFLTALSGISLPVTITALCGKSFYNQ 231 (401)
T ss_dssp EEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCE---ECCGGGGGGGGGTTCEEEEEEEETTSCEEEEE
T ss_pred EECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeece---ecCCchhhcccCCCeeeeeEEEEcCCceEEeC
Confidence 99999999999766443 2334443321 111111 1 11111 1134555558
Q ss_pred --------CCCcHHHHHHHHhccCCCcEE
Q 013943 212 --------CGNSGMEVCLDLCNHDAMPSL 232 (433)
Q Consensus 212 --------~G~~a~e~a~~l~~~g~~Vtl 232 (433)
+|+.+++++..+.+ +..|++
T Consensus 232 ~l~t~~g~sG~~~l~~s~~~~~-~~~~~i 259 (401)
T 2gqf_A 232 LLFTHRGISGPAVLQISNYWQP-TESVEI 259 (401)
T ss_dssp EEECSSEEESHHHHHHTTTCCT-TCCEEE
T ss_pred EEEECCCccHHHHHHHHHHHhc-CCEEEE
Confidence 89999999888765 555554
No 96
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.64 E-value=7e-16 Score=132.52 Aligned_cols=160 Identities=18% Similarity=0.142 Sum_probs=111.8
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceeccccc--CCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccc
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEML--GKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTAR 283 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 283 (433)
+++|||+|++|+++|..|++.|.+|+++.+.+ ..++.... ..+.+. ....
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~-~~~~~~~~~~~~~~~~-----~~~~---------------------- 54 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR-SKVKGVSRVPNYPGLL-----DEPS---------------------- 54 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CTTTTCSCCCCSTTCT-----TCCC----------------------
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-CcccCchhhhccCCCc-----CCCC----------------------
Confidence 79999999999999999999999999999887 22221000 000000 0000
Q ss_pred cCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeC--C--eEEEcCCcEecccEEEEccCCCCCCCC
Q 013943 284 FGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKR--Y--AVEFVNGRCENFDAIILATGYRSNVPS 358 (433)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~--~--~v~~~~g~~~~~D~vi~atG~~~~~~~ 358 (433)
.+.+...+.+.+++.+++++.+ +.++.. + .+.+++| ++++|.||+|+|..|+
T Consensus 55 -------------------~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~--- 111 (180)
T 2ywl_A 55 -------------------GEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT--- 111 (180)
T ss_dssp -------------------HHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH---
T ss_pred -------------------HHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC---
Confidence 0111222234455556777665 656643 2 2556677 8999999999999985
Q ss_pred ccccccccccCCCCcCCCCCCCCCCCCceEEeeeccccc----ccchhhHHHHHHHHHhhhccC
Q 013943 359 WLKESEMFSRKDGLPRRPFPNGWKGESGLYSVGFTKRGL----LGVAMDAKRIAQDIESCWKAK 418 (433)
Q Consensus 359 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~iya~Gd~~~~~----~~a~~~g~~~a~~i~~~l~~~ 418 (433)
+.+..++..+ +|.+.+| +.++++.|+|||+|||+... ..|..+|+.+|.+|.+.++..
T Consensus 112 ~~~~~g~~~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 112 LPSLLGLTRR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp HHHHHTCCEE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccccCCCCcc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhhc
Confidence 3455577666 8888888 67888999999999999653 368999999999999887654
No 97
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.56 E-value=1.8e-14 Score=128.94 Aligned_cols=124 Identities=23% Similarity=0.150 Sum_probs=84.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCce-eecCCCCCCCCCCCCCCHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQF-CELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
.+||+|||||++|+.+|..|++.|.+|+++|+.....|.|........ ....+ ..+. + ..-+.+.++..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~---~~~~~~~~~~-----d--~~g~~~~~~~~ 72 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF---PPGSLLERAY-----D--PKDERVWAFHA 72 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC---CTTCHHHHHC-----C--TTCCCHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc---chhhHHhhhc-----c--CCCCCHHHHHH
Confidence 589999999999999999999999999999998433333322111000 00000 0000 0 00115678888
Q ss_pred HHHHHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCc
Q 013943 112 YLEAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAV 176 (433)
Q Consensus 112 ~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~ 176 (433)
++.+.+++. +++++ +++|+++..+++ ..+.+.+.++ ..+++|.||+|+|.++...
T Consensus 73 ~l~~~~~~~~gv~i~-~~~v~~i~~~~~-~v~~v~~~~g--------~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 73 RAKYLLEGLRPLHLF-QATATGLLLEGN-RVVGVRTWEG--------PPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHHHHTCTTEEEE-ECCEEEEEEETT-EEEEEEETTS--------CCEECSEEEECCTTCSSCE
T ss_pred HHHHHHHcCCCcEEE-EeEEEEEEEeCC-EEEEEEECCC--------CEEECCEEEECCCCChhhc
Confidence 898888887 88877 579999988763 3345666665 5799999999999654443
No 98
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.55 E-value=1.7e-15 Score=149.98 Aligned_cols=194 Identities=17% Similarity=0.087 Sum_probs=104.7
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc--ccccc----c---Cceeee----------------------
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSNCIASL--WQLKT----Y---DRLRLH---------------------- 83 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~--w~~~~----~---~~~~~~---------------------- 83 (433)
||+|||+|++|+++|..|++.|.+|+|+||. ..+|. |.... . +.....
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44442 11100 0 000000
Q ss_pred -cCC--ceeecCCCCCCC--------CCC-----CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEe
Q 013943 84 -LPK--QFCELPLMGFPS--------EFP-----TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTT 147 (433)
Q Consensus 84 -~~~--~~~~~~~~~~~~--------~~~-----~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~ 147 (433)
.+. .++.-...++.. ..+ ...+...+...+.+.+++.+++++.+++| ++..+++ ...-+...
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~-~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDG-KVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETT-EEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCC-EEEEEEEE
Confidence 000 000000011110 000 11245677888888888889999999999 9987653 22122332
Q ss_pred ecCcCCCceeEEEEeCEEEEccCCCCCCccCCcc-CCCCCCCceeecc-----CCCCCCCCCCC-eEEEECCCCcHHHHH
Q 013943 148 VGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIE-GSDEFGGDIRHTS-----LYKSGEDFRGK-RVLVVGCGNSGMEVC 220 (433)
Q Consensus 148 ~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~-g~~~~~~~~~~~~-----~~~~~~~~~~~-~v~VvG~G~~a~e~a 220 (433)
+. + ..+.+|.||+|||. .+..++.. +.....|..+..+ ...+....... .++++|+| +++++
T Consensus 158 ~~----~---g~~~a~~VVlAtGg--~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~a 226 (472)
T 2e5v_A 158 KR----G---LVEDVDKLVLATGG--YSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLT 226 (472)
T ss_dssp TT----E---EECCCSEEEECCCC--CGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECC
T ss_pred eC----C---CeEEeeeEEECCCC--CcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeee
Confidence 11 1 34679999999995 44444332 1112222211110 11111111111 34555766 77777
Q ss_pred HHHhccCCCcEEEEecCcceeccc
Q 013943 221 LDLCNHDAMPSLVVRDTVHVLPQE 244 (433)
Q Consensus 221 ~~l~~~g~~Vtl~~r~~~~~lp~~ 244 (433)
..+...|..+ +..+.. ++++.+
T Consensus 227 e~~~~~G~~~-v~~~g~-rf~~~~ 248 (472)
T 2e5v_A 227 ETLRGEGAQI-INENGE-RFLFNY 248 (472)
T ss_dssp THHHHTTCEE-EETTCC-CGGGGT
T ss_pred hhhcCCceEE-ECCCCC-CCCccC
Confidence 7777777655 443433 666544
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.35 E-value=5.4e-12 Score=108.03 Aligned_cols=118 Identities=23% Similarity=0.324 Sum_probs=86.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
|+||+|||||++|+.+|..|.+.|.+|+++|+.+..-... ..+..++. ++......++.++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~-------------~~~~~~~~------~~~~~~~~~~~~~ 61 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV-------------SRVPNYPG------LLDEPSGEELLRR 61 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC-------------SCCCCSTT------CTTCCCHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc-------------hhhhccCC------CcCCCCHHHHHHH
Confidence 5799999999999999999999999999999987321100 00000111 1112457889999
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCccCC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEIEGS 183 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~~g~ 183 (433)
+.+.+++.+++++++ +|++++.++ +.|.+++.+ .++.+|.||+|+| ..|.++...|.
T Consensus 62 l~~~~~~~gv~v~~~-~v~~i~~~~--~~~~v~~~~---------g~i~ad~vI~A~G--~~~~~~~~~g~ 118 (180)
T 2ywl_A 62 LEAHARRYGAEVRPG-VVKGVRDMG--GVFEVETEE---------GVEKAERLLLCTH--KDPTLPSLLGL 118 (180)
T ss_dssp HHHHHHHTTCEEEEC-CCCEEEECS--SSEEEECSS---------CEEEEEEEEECCT--TCCHHHHHHTC
T ss_pred HHHHHHHcCCEEEeC-EEEEEEEcC--CEEEEEECC---------CEEEECEEEECCC--CCCCccccCCC
Confidence 999999999999999 999998866 446676654 2789999999999 55554333333
No 100
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.34 E-value=6.9e-12 Score=121.71 Aligned_cols=133 Identities=20% Similarity=0.231 Sum_probs=90.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc---------cc---cCceeeecCCcee----ec----
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL---------KT---YDRLRLHLPKQFC----EL---- 91 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~---------~~---~~~~~~~~~~~~~----~~---- 91 (433)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.+.. +. ...+....+.... .+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 4589999999999999999999999999999999987654311 00 0000000000000 00
Q ss_pred -------CCCCCCC-----CCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEE
Q 013943 92 -------PLMGFPS-----EFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEME 159 (433)
Q Consensus 92 -------~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~ 159 (433)
...++.. .++ .....++.+.+.+.+++.+++++++++|+++..++ +.|.|.+.+ ..
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~~V~~~~---------g~ 173 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGFRVTTSA---------GT 173 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETT---------EE
T ss_pred HHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECC---------cE
Confidence 0000000 011 13567889999999999999999999999999876 467787764 37
Q ss_pred EEeCEEEEccCCCCCCc
Q 013943 160 YRCRWLVVATGENAEAV 176 (433)
Q Consensus 160 ~~~d~viiAtG~~~~p~ 176 (433)
+++|.||+|+|.++.|.
T Consensus 174 i~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 174 VDAASLVVASGGKSIPK 190 (417)
T ss_dssp EEESEEEECCCCSSCGG
T ss_pred EEeeEEEECCCCccCCC
Confidence 99999999999776543
No 101
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.30 E-value=1.7e-11 Score=118.23 Aligned_cols=135 Identities=16% Similarity=0.146 Sum_probs=87.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccc------cc----------------ccCceeeecCCceee
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQ------LK----------------TYDRLRLHLPKQFCE 90 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~------~~----------------~~~~~~~~~~~~~~~ 90 (433)
.|||+||||||+|+++|..|+++|++|+|+|+.+.++.... .. .+....+..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 58999999999999999999999999999999876543211 00 001111111110000
Q ss_pred cC-CCCCCCCCCC-CCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEc
Q 013943 91 LP-LMGFPSEFPT-YPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVA 168 (433)
Q Consensus 91 ~~-~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiA 168 (433)
.. .........+ ...+..+...+.+.+.+.+++++++++|+.+..+++. ...+.... .++..++++|.||.|
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~-~~~v~~~~-----~~~~~~~~a~~vIgA 157 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGK-VAGAKIRH-----NNEIVDVRAKMVIAA 157 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTE-EEEEEEEE-----TTEEEEEEEEEEEEC
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccce-eeeeeecc-----cccceEEEEeEEEeC
Confidence 00 0000001111 2478899999999999999999999999999887642 22222222 233468999999999
Q ss_pred cCCCC
Q 013943 169 TGENA 173 (433)
Q Consensus 169 tG~~~ 173 (433)
+|..+
T Consensus 158 dG~~S 162 (397)
T 3oz2_A 158 DGFES 162 (397)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 99654
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.29 E-value=1.8e-11 Score=118.36 Aligned_cols=134 Identities=17% Similarity=0.164 Sum_probs=89.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc------------c----------cCceeeecCCce--
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK------------T----------YDRLRLHLPKQF-- 88 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~------------~----------~~~~~~~~~~~~-- 88 (433)
.+||+|||||++|+++|..|++.|++|+|+|+....|+.+... . +..+....+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4899999999999999999999999999999998665422110 0 001111111100
Q ss_pred eecCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEE-EEEeecCcCCCceeEEEEeCEEEE
Q 013943 89 CELPLMGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWR-VKTTVGGQKCGVEEMEYRCRWLVV 167 (433)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~-v~~~~g~~~~~~~~~~~~~d~vii 167 (433)
..+..............+..+..++.+.+.+.+++++++++|++++.++ +.+. |++.+ .++..++++|.||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~-----~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRH-----NNEIVDVRAKMVIA 156 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEE-----TTEEEEEEEEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEE-----CCeEEEEEcCEEEE
Confidence 0111100001111224788899999999999999999999999999875 4555 66532 11136899999999
Q ss_pred ccCCCC
Q 013943 168 ATGENA 173 (433)
Q Consensus 168 AtG~~~ 173 (433)
|+|.++
T Consensus 157 A~G~~s 162 (397)
T 3cgv_A 157 ADGFES 162 (397)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999655
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.26 E-value=9.9e-12 Score=125.10 Aligned_cols=172 Identities=16% Similarity=0.180 Sum_probs=103.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCCcccccccCcee-------ee-cCC-----------ceeec
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN-CIASLWQLKTYDRLR-------LH-LPK-----------QFCEL 91 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~-~~gg~w~~~~~~~~~-------~~-~~~-----------~~~~~ 91 (433)
..|||+|||||++|+++|..|++.|.+|+|+|++. .+|.........++. +. ... .+..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 35899999999999999999999999999999974 333211110000000 00 000 00000
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEc
Q 013943 92 PLMGFPSEF--PTYPSKQQFVDYLEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVA 168 (433)
Q Consensus 92 ~~~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiA 168 (433)
.....+... .....+..+...+.+.+++ .++++ ++++|+.+..+++ ..+.|.+.+| ..+.||.||+|
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g-~V~GV~t~dG--------~~I~Ad~VVLA 176 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEND-RVVGAVTQMG--------LKFRAKAVVLT 176 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSS-BEEEEEETTS--------EEEEEEEEEEC
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCC-EEEEEEECCC--------CEEECCEEEEc
Confidence 000000000 0113556788888888887 58887 6779999987653 3445777665 68999999999
Q ss_pred cCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEe
Q 013943 169 TGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVR 235 (433)
Q Consensus 169 tG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r 235 (433)
|| ..+..+.++|...+ .+.+ +| |.+|++++..|.+.|.+|+.+..
T Consensus 177 TG--t~s~~~~i~G~~~~----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 177 VG--TFLDGKIHIGLDNY----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp CS--TTTCCEEECC---------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred CC--CCccCccccCcccC----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 99 44554456665421 1223 56 88899999999999999998853
No 104
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=117.56 Aligned_cols=129 Identities=16% Similarity=0.183 Sum_probs=85.1
Q ss_pred CCCeEEECCChHHHHHHHHHHH---cCCCEEEEecCCCCCCccccccc---CceeeecCCceeecCC-------------
Q 013943 33 VPGPVIVGAGPSGLATAACLKE---RGIPSILLERSNCIASLWQLKTY---DRLRLHLPKQFCELPL------------- 93 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~---~g~~v~iie~~~~~gg~w~~~~~---~~~~~~~~~~~~~~~~------------- 93 (433)
|+||+|||||++|+++|..|++ .|++|+|+|++...||.|..... .....+....++....
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 5799999999999999999999 89999999999999887665321 1111111111110000
Q ss_pred ------CCCC---------CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeE
Q 013943 94 ------MGFP---------SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEM 158 (433)
Q Consensus 94 ------~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~ 158 (433)
.++. +....+.....+..+...++++.+++++++++|++++.++ +.|+|++.+| .
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~--~~~~v~~~~g--------~ 150 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRD--DKWEVSKQTG--------S 150 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECS--SSEEEEESSS--------C
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CEEEEEECCC--------C
Confidence 0000 0001111222233444555555689999999999999876 5688888765 4
Q ss_pred EEEeCEEEEccCC
Q 013943 159 EYRCRWLVVATGE 171 (433)
Q Consensus 159 ~~~~d~viiAtG~ 171 (433)
.+.+|.||+|+..
T Consensus 151 ~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 151 PEQFDLIVLTMPV 163 (342)
T ss_dssp CEEESEEEECSCH
T ss_pred EEEcCEEEECCCH
Confidence 5799999999984
No 105
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.24 E-value=3.8e-11 Score=121.28 Aligned_cols=135 Identities=18% Similarity=0.154 Sum_probs=86.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC-------------------cccccccCceeee---cCCc--
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIAS-------------------LWQLKTYDRLRLH---LPKQ-- 87 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg-------------------~w~~~~~~~~~~~---~~~~-- 87 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.... .|....-...... ....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 358999999999999999999999999999999875431 1110000000000 0000
Q ss_pred -eeecCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEE
Q 013943 88 -FCELPLMGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLV 166 (433)
Q Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vi 166 (433)
...+..............+..+...+.+.+.+.+++++++++|++++.++ +.++|++.+. ++ ..++++|+||
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~~~----~G-~~~~~a~~vV 200 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVAGP----SG-PYPVRARYGV 200 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEEET----TE-EEEEEESEEE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEEeC----CC-cEEEEeCEEE
Confidence 00011011000111235788999999999988899999999999998876 4566776321 11 2589999999
Q ss_pred EccCCCC
Q 013943 167 VATGENA 173 (433)
Q Consensus 167 iAtG~~~ 173 (433)
.|+|..+
T Consensus 201 ~ADG~~S 207 (570)
T 3fmw_A 201 GCDGGRS 207 (570)
T ss_dssp ECSCSSC
T ss_pred EcCCCCc
Confidence 9999765
No 106
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.23 E-value=4e-11 Score=113.20 Aligned_cols=130 Identities=18% Similarity=0.236 Sum_probs=80.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCcee-----------------------
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFC----------------------- 89 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~----------------------- 89 (433)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+................+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 479999999999999999999999999999999888876654322222111110000
Q ss_pred -----ecCCCCC---CCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEE
Q 013943 90 -----ELPLMGF---PSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYR 161 (433)
Q Consensus 90 -----~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 161 (433)
.+....+ ......+.....+......+.+ +++++++++|++++.++ +.|+|++.+| .....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~--~~~~v~~~~g-------~~~~~ 150 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPVSFSCRITEVFRGE--EHWNLLDAEG-------QNHGP 150 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCEECSCCEEEEEECS--SCEEEEETTS-------CEEEE
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcEEecCEEEEEEEeC--CEEEEEeCCC-------cCccc
Confidence 0000000 0000111111112222222222 78999999999999876 5688887765 23345
Q ss_pred eCEEEEccCCCC
Q 013943 162 CRWLVVATGENA 173 (433)
Q Consensus 162 ~d~viiAtG~~~ 173 (433)
+|+||+|+|..+
T Consensus 151 a~~vV~a~g~~~ 162 (336)
T 1yvv_A 151 FSHVIIATPAPQ 162 (336)
T ss_dssp ESEEEECSCHHH
T ss_pred cCEEEEcCCHHH
Confidence 999999999643
No 107
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.21 E-value=9.6e-11 Score=114.22 Aligned_cols=134 Identities=15% Similarity=0.221 Sum_probs=87.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC----CCcccccc--------------------cCceeeecCCcee
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCI----ASLWQLKT--------------------YDRLRLHLPKQFC 89 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~----gg~w~~~~--------------------~~~~~~~~~~~~~ 89 (433)
+||+|||||++|+++|..|++.|++|+|+|+.... |....... .............
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 79999999999999999999999999999998632 22111110 0001111111111
Q ss_pred ecCCCC--CC-CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEE
Q 013943 90 ELPLMG--FP-SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLV 166 (433)
Q Consensus 90 ~~~~~~--~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vi 166 (433)
.+.... .. ........+..+...+.+.+.+.+++++++++|++++.+++...+.+.+.+| +..++++|.||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g------~~~~~~a~~vV 159 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDING------NKREIEARFII 159 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTS------CEEEEEEEEEE
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCC------CEEEEEcCEEE
Confidence 111100 00 0111235788999999999999999999999999999876432334444443 23479999999
Q ss_pred EccCCCC
Q 013943 167 VATGENA 173 (433)
Q Consensus 167 iAtG~~~ 173 (433)
.|+|..+
T Consensus 160 ~A~G~~s 166 (421)
T 3nix_A 160 DASGYGR 166 (421)
T ss_dssp ECCGGGC
T ss_pred ECCCCch
Confidence 9999544
No 108
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.21 E-value=2.6e-11 Score=117.79 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=86.8
Q ss_pred CCCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc-------------------ccc-----cccCceee
Q 013943 27 SPRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASL-------------------WQL-----KTYDRLRL 82 (433)
Q Consensus 27 ~~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~-------------------w~~-----~~~~~~~~ 82 (433)
+++....+||+|||||++|+++|..|++.|++|+|+|+.+.+... |.. .....+..
T Consensus 17 ~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 96 (407)
T 3rp8_A 17 NLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAY 96 (407)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEE
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEE
Confidence 344455689999999999999999999999999999998754311 000 00111111
Q ss_pred ecCC---ceeecCCCCCC---CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCce
Q 013943 83 HLPK---QFCELPLMGFP---SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVE 156 (433)
Q Consensus 83 ~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~ 156 (433)
.... ....++..... ........+.++...+.+.+.+ ++++++++|++++.++ +.+++++.+|
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~v~~~~g------- 165 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVTVWFTDG------- 165 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEET--TEEEEEETTS-------
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecC--CcEEEEEcCC-------
Confidence 1110 01111100000 0111124678888888887766 7889999999999887 5688888876
Q ss_pred eEEEEeCEEEEccCCCCC
Q 013943 157 EMEYRCRWLVVATGENAE 174 (433)
Q Consensus 157 ~~~~~~d~viiAtG~~~~ 174 (433)
.++.+|.||.|+|..+.
T Consensus 166 -~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 166 -SSASGDLLIAADGSHSA 182 (407)
T ss_dssp -CEEEESEEEECCCTTCS
T ss_pred -CEEeeCEEEECCCcChH
Confidence 58999999999997654
No 109
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.21 E-value=1.6e-10 Score=115.12 Aligned_cols=136 Identities=18% Similarity=0.128 Sum_probs=90.5
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc--------------cccCceeeecCCceeecCC--C
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL--------------KTYDRLRLHLPKQFCELPL--M 94 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~--------------~~~~~~~~~~~~~~~~~~~--~ 94 (433)
...+||+||||||+|+++|..|++.|++|+|||+.+..+..-+. ...+.+....+.....+.. +
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 35699999999999999999999999999999998754321000 0000000000000000100 0
Q ss_pred ---CCCCCCC--CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEcc
Q 013943 95 ---GFPSEFP--TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVAT 169 (433)
Q Consensus 95 ---~~~~~~~--~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAt 169 (433)
......+ ....+..+...+.+.+.+.+++++++++|++++.++ +.+++++.++ .+ ..++++|+||.|+
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~----~g-~~~~~a~~vVgAD 161 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEVRGP----EG-KHTLRAAYLVGCD 161 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEEEET----TE-EEEEEESEEEECC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEEEcC----CC-CEEEEeCEEEECC
Confidence 0000111 123678888999999999999999999999999887 4677877764 22 3589999999999
Q ss_pred CCCC
Q 013943 170 GENA 173 (433)
Q Consensus 170 G~~~ 173 (433)
|..|
T Consensus 162 G~~S 165 (500)
T 2qa1_A 162 GGRS 165 (500)
T ss_dssp CTTC
T ss_pred Ccch
Confidence 9765
No 110
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.18 E-value=1.3e-10 Score=117.69 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=89.7
Q ss_pred CCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc------------------cccc---cc---Cceeee
Q 013943 28 PRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASL------------------WQLK---TY---DRLRLH 83 (433)
Q Consensus 28 ~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~------------------w~~~---~~---~~~~~~ 83 (433)
..++..+||+|||||++|+++|..|++.|++|+|+|+.+..+.. |... .+ ......
T Consensus 18 ~~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 18 GSHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred cCcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 33344589999999999999999999999999999998533211 1000 00 000000
Q ss_pred cCC--c--eeecCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCce
Q 013943 84 LPK--Q--FCELPLMG---FPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVE 156 (433)
Q Consensus 84 ~~~--~--~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~ 156 (433)
... . ...+.... +.........+..+...+.+.+.+.+++++++++|+++..+++ ..+.|++.+ +++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g-~~~~V~~~~-----~G~ 171 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDP-DRVVLTVRR-----GGE 171 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCST-TCEEEEEEE-----TTE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEEEec-----CCc
Confidence 000 0 00111000 0001112357889999999999999999999999999987633 567777763 222
Q ss_pred eEEEEeCEEEEccCCCC
Q 013943 157 EMEYRCRWLVVATGENA 173 (433)
Q Consensus 157 ~~~~~~d~viiAtG~~~ 173 (433)
..++++|.||.|+|..+
T Consensus 172 ~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EEEEEESEEEECCGGGC
T ss_pred eEEEEcCEEEECCCCcc
Confidence 36899999999999654
No 111
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.17 E-value=5.6e-11 Score=116.80 Aligned_cols=135 Identities=24% Similarity=0.334 Sum_probs=89.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc-----cccC------ceeeecC--Ccee-----ec--
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL-----KTYD------RLRLHLP--KQFC-----EL-- 91 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~-----~~~~------~~~~~~~--~~~~-----~~-- 91 (433)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+.... ..+. .+....+ ..+. .+
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 4489999999999999999999999999999999876642110 0000 0000000 0000 00
Q ss_pred ---------CCCCCC-----CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCcee
Q 013943 92 ---------PLMGFP-----SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEE 157 (433)
Q Consensus 92 ---------~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~ 157 (433)
...++. ..++.......+.+.+.+.+++.+++++++++|+++..+++ ..|.|++.++
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~-~v~~V~~~~G-------- 175 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENG-QTKAVILQTG-------- 175 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETTC--------
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCC-cEEEEEECCC--------
Confidence 000100 00111124678888999999999999999999999987653 3377877765
Q ss_pred EEEEeCEEEEccCCCCCC
Q 013943 158 MEYRCRWLVVATGENAEA 175 (433)
Q Consensus 158 ~~~~~d~viiAtG~~~~p 175 (433)
..+++|.||+|+|.++.|
T Consensus 176 ~~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 EVLETNHVVIAVGGKSVP 193 (447)
T ss_dssp CEEECSCEEECCCCSSSG
T ss_pred CEEECCEEEECCCCCcCC
Confidence 469999999999976643
No 112
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.15 E-value=2.6e-10 Score=113.43 Aligned_cols=135 Identities=16% Similarity=0.068 Sum_probs=90.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc--------------cccCceeeecCCceeecCC----
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL--------------KTYDRLRLHLPKQFCELPL---- 93 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~--------------~~~~~~~~~~~~~~~~~~~---- 93 (433)
..+||+||||||+|+++|..|++.|++|+|||+.+......+. ...+.+....+.....+..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 5689999999999999999999999999999998754321100 0000000000000000000
Q ss_pred -CCCCCCCC--CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccC
Q 013943 94 -MGFPSEFP--TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 94 -~~~~~~~~--~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG 170 (433)
.......+ ....+..+...+.+.+.+.+++++++++|++++.++ +.+++++.++ .+ ..++++|+||.|+|
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~----~g-~~~~~a~~vVgADG 163 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVEGP----DG-PRSLTTRYVVGCDG 163 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEECS----SC-EEEEEEEEEEECCC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcC----CC-cEEEEeCEEEEccC
Confidence 00111111 124678889999999999999999999999999877 4577777664 22 35899999999999
Q ss_pred CCC
Q 013943 171 ENA 173 (433)
Q Consensus 171 ~~~ 173 (433)
..|
T Consensus 164 ~~S 166 (499)
T 2qa2_A 164 GRS 166 (499)
T ss_dssp TTC
T ss_pred ccc
Confidence 765
No 113
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.15 E-value=7.6e-11 Score=118.27 Aligned_cols=173 Identities=14% Similarity=0.113 Sum_probs=109.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCCcccccccCcee---e----e-cCC--------ceeecC--
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN-CIASLWQLKTYDRLR---L----H-LPK--------QFCELP-- 92 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~-~~gg~w~~~~~~~~~---~----~-~~~--------~~~~~~-- 92 (433)
..|||+|||||++|+++|..|++.|.+|+|+|++. .+|.........++. + . ... ....+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 45999999999999999999999999999999974 344211110000000 0 0 000 000000
Q ss_pred -CCCCCCCC--CCCCCHHHHHHHHHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEc
Q 013943 93 -LMGFPSEF--PTYPSKQQFVDYLEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVA 168 (433)
Q Consensus 93 -~~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiA 168 (433)
....+... .....+..+...+.+.+++ .++++ ++++|+.+..+++ ..+.|.+.+| ..+.+|.||+|
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g-~V~GV~t~dG--------~~i~AdaVVLA 175 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNN-QVVGVRTNLG--------VEYKTKAVVVT 175 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSS-BEEEEEETTS--------CEEECSEEEEC
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCC-EEEEEEECCC--------cEEEeCEEEEc
Confidence 00000000 0123567888888888887 48887 5779999987653 3445777665 68999999999
Q ss_pred cCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEec
Q 013943 169 TGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRD 236 (433)
Q Consensus 169 tG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~ 236 (433)
|| ..+..+.++|...+. +.+ + |+.++.+++..|.+.|.+++.+.+.
T Consensus 176 TG--~~s~~~~~~G~~~~~----------------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~tg 221 (637)
T 2zxi_A 176 TG--TFLNGVIYIGDKMIP----------------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKTG 221 (637)
T ss_dssp CT--TCBTCEEEETTEEEE----------------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEEE
T ss_pred cC--CCccCceeccceecC----------------CCC---C-CchhHHHHHHHHHhcCCceEEecCC
Confidence 99 555555566643210 112 2 3678899999999999998877653
No 114
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.15 E-value=2.3e-10 Score=115.15 Aligned_cols=136 Identities=18% Similarity=0.136 Sum_probs=90.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc------------------------ccCc---e---ee
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK------------------------TYDR---L---RL 82 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~------------------------~~~~---~---~~ 82 (433)
.+||+|||||++|+++|..|+++|++|+|||+.+..+..-+.. .... + ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 4899999999999999999999999999999987543110000 0000 0 00
Q ss_pred ec--CCcee----ecCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCC--eEEEEEeec
Q 013943 83 HL--PKQFC----ELPL-----MGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIR--FWRVKTTVG 149 (433)
Q Consensus 83 ~~--~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~--~~~v~~~~g 149 (433)
.. ...+. .+.. ............+..+...+.+.+.+.+++++++++|++++.+++.. .+++++.++
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~ 164 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGP 164 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEET
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcC
Confidence 00 00000 0000 00000112235789999999999999999999999999999877310 677777663
Q ss_pred CcCCCceeEEEEeCEEEEccCCCC
Q 013943 150 GQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 150 ~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
++ ..++++|+||.|+|..+
T Consensus 165 ----~~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 165 ----DG-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ----TE-EEEEEEEEEEECCCTTC
T ss_pred ----CC-eEEEEeCEEEECCCCcc
Confidence 22 46899999999999765
No 115
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.13 E-value=6.1e-10 Score=111.18 Aligned_cols=132 Identities=23% Similarity=0.405 Sum_probs=86.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC-------CcccccccCc------------------eeeecCCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIA-------SLWQLKTYDR------------------LRLHLPKQ 87 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~g-------g~w~~~~~~~------------------~~~~~~~~ 87 (433)
.+||+|||||++|+++|..|++.|++|+|+|+...++ +.|....... +.......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4899999999999999999999999999999987542 2222211000 00000000
Q ss_pred -e-----e-ecCCCCCCC-----CCC--CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCC
Q 013943 88 -F-----C-ELPLMGFPS-----EFP--TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKC 153 (433)
Q Consensus 88 -~-----~-~~~~~~~~~-----~~~--~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~ 153 (433)
. . .+..+..+. ..+ +.....++...+.+.+.+.+++++++++|+++..+++ ..+.|++.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~-~v~gV~l~~G---- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDG-QITGVTLSNG---- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSS-BEEEEEETTS----
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCC-EEEEEEECCC----
Confidence 0 0 000000000 000 1112467778888888889999999999999988763 3455777765
Q ss_pred CceeEEEEeCEEEEccCCCC
Q 013943 154 GVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 154 ~~~~~~~~~d~viiAtG~~~ 173 (433)
..+.+|.||+|+|.++
T Consensus 262 ----~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 ----EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ----CEEECSCEEECCCTTC
T ss_pred ----CEEECCEEEECCCCCh
Confidence 6799999999999755
No 116
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.12 E-value=9e-10 Score=111.67 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=89.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHc------CCCEEEEecCCCCCCccccc-c---------cCc----------------e
Q 013943 33 VPGPVIVGAGPSGLATAACLKER------GIPSILLERSNCIASLWQLK-T---------YDR----------------L 80 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~------g~~v~iie~~~~~gg~w~~~-~---------~~~----------------~ 80 (433)
.+||+|||||++|+++|..|++. |++|+|||+.+.+++..... . ++. +
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 48999999999999999999999 99999999998766431110 0 000 0
Q ss_pred eeecCCceeecCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCcee
Q 013943 81 RLHLPKQFCELPLMG---FPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEE 157 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~ 157 (433)
..........++..+ ..........+.++...|.+.+++.+++++++++|+++..+++...+.|.+.+.....+++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~ 194 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAP 194 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCE
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCc
Confidence 000010011111111 00000112478899999999999999999999999999987643333355542000001111
Q ss_pred -------EEEEeCEEEEccCCCC
Q 013943 158 -------MEYRCRWLVVATGENA 173 (433)
Q Consensus 158 -------~~~~~d~viiAtG~~~ 173 (433)
.++++|+||+|+|..+
T Consensus 195 ~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 195 KTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp EEEEECCCEEECSEEEECCCTTC
T ss_pred ccccCCceEEECCEEEEeeCCCc
Confidence 4799999999999755
No 117
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.12 E-value=1.3e-10 Score=111.71 Aligned_cols=126 Identities=18% Similarity=0.172 Sum_probs=85.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc------------------------cccCceeeecCC-
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL------------------------KTYDRLRLHLPK- 86 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~------------------------~~~~~~~~~~~~- 86 (433)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+++.-.. .....+......
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 3589999999999999999999999999999998765421000 000000000000
Q ss_pred ceeecCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEE
Q 013943 87 QFCELPLMGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLV 166 (433)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~vi 166 (433)
....++ .+........+.++...+.+.+.+.+++++++++|++++. + + +|++.+| .++++|.||
T Consensus 90 ~~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-~--~v~~~~g--------~~~~ad~vV 153 (379)
T 3alj_A 90 SVSKET---FNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--V-G--RLTLQTG--------EVLEADLIV 153 (379)
T ss_dssp EEEEEC---GGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--T-T--EEEETTS--------CEEECSEEE
T ss_pred eeeecc---CCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--C-C--EEEECCC--------CEEEcCEEE
Confidence 000000 0000012247788999999999999999999999999986 2 3 5777765 579999999
Q ss_pred EccCCCC
Q 013943 167 VATGENA 173 (433)
Q Consensus 167 iAtG~~~ 173 (433)
+|+|..+
T Consensus 154 ~AdG~~s 160 (379)
T 3alj_A 154 GADGVGS 160 (379)
T ss_dssp ECCCTTC
T ss_pred ECCCccH
Confidence 9999644
No 118
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.11 E-value=1.6e-10 Score=111.61 Aligned_cols=136 Identities=18% Similarity=0.190 Sum_probs=85.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC------C-C-cccc--------c----------ccCceeeecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI------A-S-LWQL--------K----------TYDRLRLHLPK 86 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~------g-g-~w~~--------~----------~~~~~~~~~~~ 86 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. + | .+.. . ....+......
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 379999999999999999999999999999998631 1 1 1100 0 00111111110
Q ss_pred ceeecCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEE-eecCcCCCceeEEEEeCE
Q 013943 87 QFCELPLMGFP-SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKT-TVGGQKCGVEEMEYRCRW 164 (433)
Q Consensus 87 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~-~~g~~~~~~~~~~~~~d~ 164 (433)
....+...... ........+.++...+.+.+.+.+++++++++|++++.+++ +.+.|++ .+| +..++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~~g------~~~~~~a~~ 154 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPYVTFERDG------ERLRLDCDY 154 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCEEEEEETT------EEEEEECSE
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceEEEEecCC------cEEEEEeCE
Confidence 00000000000 00011235677888888888888999999999999987532 3456766 444 123799999
Q ss_pred EEEccCCCCCC
Q 013943 165 LVVATGENAEA 175 (433)
Q Consensus 165 viiAtG~~~~p 175 (433)
||.|+|..+..
T Consensus 155 vV~AdG~~S~v 165 (394)
T 1k0i_A 155 IAGCDGFHGIS 165 (394)
T ss_dssp EEECCCTTCST
T ss_pred EEECCCCCcHH
Confidence 99999976643
No 119
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.11 E-value=6.2e-11 Score=117.95 Aligned_cols=139 Identities=17% Similarity=0.068 Sum_probs=88.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCce-eeecCCcee-ecCCCCCCCCCCCCCCHHHH
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRL-RLHLPKQFC-ELPLMGFPSEFPTYPSKQQF 109 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 109 (433)
..+||+|||||++|+++|..|++.|++|+|||+.+.+|+.......+.. ......... ....+.. .........++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCT--GTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTC--TTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccc--cccccCCHHHH
Confidence 4689999999999999999999999999999999877653211111100 000000000 0000000 00012356888
Q ss_pred HHHHHHHHHHcCCcceecceEEEEEEeC-CCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 110 VDYLEAYAKRFEIRPRFNETVSQAEYDA-TIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 110 ~~~l~~~~~~~~l~~~~~~~v~~v~~~~-~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
...+.+.+.+.+++++++++|++++.++ +...|.|++.+. .+++...+++|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~---~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN---PPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC---CCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC---CCCCEEEEEcCEEEECCCCCccc
Confidence 8999999988999999999999998752 224566776320 01112468999999999965443
No 120
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.10 E-value=4.1e-10 Score=110.38 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHHHcCCcceecc---eEEEEEEeCCCCeEE-EEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 105 SKQQFVDYLEAYAKRFEIRPRFNE---TVSQAEYDATIRFWR-VKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 105 ~~~~~~~~l~~~~~~~~l~~~~~~---~v~~v~~~~~~~~~~-v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
....+...+.+.+++.++++++++ +|+++..++ +.++ |++.++ .++.+|.||+|+|.++....
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G--------~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADG--------KIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTT--------EEEECSEEEECCGGGGGGTS
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCC--------CEEECCEEEECCCCChhhhc
Confidence 456888899999999999999999 999999876 5666 777775 68999999999997654443
No 121
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.09 E-value=9.1e-10 Score=110.11 Aligned_cols=136 Identities=21% Similarity=0.250 Sum_probs=86.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC----CCCcccccccC----------c-----ee------eecCCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNC----IASLWQLKTYD----------R-----LR------LHLPKQ 87 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~----~gg~w~~~~~~----------~-----~~------~~~~~~ 87 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+. .|..+...... . .. ......
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 48999999999999999999999999999999872 22211110000 0 00 000000
Q ss_pred ----eeecCCCCCCC-CCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEe
Q 013943 88 ----FCELPLMGFPS-EFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRC 162 (433)
Q Consensus 88 ----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~ 162 (433)
...+...+... .......+..+...+.+.+.+.+++++++++|+++..+++ ....|.+... +++..++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~-~v~gv~~~~~----dG~~~~i~a 161 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGE-RAVGVRYRNT----EGVELMAHA 161 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETT-EEEEEEEECS----SSCEEEEEE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECC-EEEEEEEEeC----CCCEEEEEc
Confidence 00111111000 1111257889999999999999999999999999998763 2111333321 223358999
Q ss_pred CEEEEccCCCC
Q 013943 163 RWLVVATGENA 173 (433)
Q Consensus 163 d~viiAtG~~~ 173 (433)
|.||.|+|..+
T Consensus 162 d~VI~AdG~~S 172 (512)
T 3e1t_A 162 RFIVDASGNRT 172 (512)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEECCCcch
Confidence 99999999755
No 122
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.09 E-value=3.1e-10 Score=109.84 Aligned_cols=130 Identities=15% Similarity=0.110 Sum_probs=82.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC-----CcccccccCce---------------------eeecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIA-----SLWQLKTYDRL---------------------RLHLPK 86 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~g-----g~w~~~~~~~~---------------------~~~~~~ 86 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+..+ +.|........ ......
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 4799999999999999999999999999999986432 22211100000 000000
Q ss_pred ceeecCCC-CCC-CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCE
Q 013943 87 QFCELPLM-GFP-SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRW 164 (433)
Q Consensus 87 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~ 164 (433)
....+... +.. ........+.++.+++.+.+. +.+++++++|++++.++ +.|+|++.+| .++++|.
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ad~ 173 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGK--KKWTLTFENK--------PSETADL 173 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECS--SSEEEEETTS--------CCEEESE
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECC--CEEEEEECCC--------cEEecCE
Confidence 00000000 000 001112467777777776543 25789999999999876 5677888775 5789999
Q ss_pred EEEccCCCCC
Q 013943 165 LVVATGENAE 174 (433)
Q Consensus 165 viiAtG~~~~ 174 (433)
||.|+|..+.
T Consensus 174 vV~AdG~~S~ 183 (398)
T 2xdo_A 174 VILANGGMSK 183 (398)
T ss_dssp EEECSCTTCS
T ss_pred EEECCCcchh
Confidence 9999997654
No 123
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.08 E-value=2.7e-10 Score=110.24 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=87.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC-------------------cccc-----cccCceeeecCC--
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIAS-------------------LWQL-----KTYDRLRLHLPK-- 86 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg-------------------~w~~-----~~~~~~~~~~~~-- 86 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+.... .|.. .....+......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 47999999999999999999999999999999865411 0000 000000000000
Q ss_pred ceeecCCCCCC-CCCCCCCCHHHHHHHHHHHHHHc-CCcceecceEEEEEEeCCCCeE--EEEEeecCcCCCceeEEEEe
Q 013943 87 QFCELPLMGFP-SEFPTYPSKQQFVDYLEAYAKRF-EIRPRFNETVSQAEYDATIRFW--RVKTTVGGQKCGVEEMEYRC 162 (433)
Q Consensus 87 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~--~v~~~~g~~~~~~~~~~~~~ 162 (433)
....+...... ........+.++...+.+.+.+. +++++++++|++++.++ +.+ .|++.+| .++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g--------~~~~a 155 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDG--------RVLRP 155 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTS--------CEEEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCC--------CEEEC
Confidence 01111110000 01112357889999999988887 89999999999999876 446 6777765 58999
Q ss_pred CEEEEccCCCC
Q 013943 163 RWLVVATGENA 173 (433)
Q Consensus 163 d~viiAtG~~~ 173 (433)
|.||+|+|.++
T Consensus 156 d~vV~AdG~~s 166 (399)
T 2x3n_A 156 RVVVGADGIAS 166 (399)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEECCCCCh
Confidence 99999999655
No 124
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.07 E-value=1.4e-10 Score=116.75 Aligned_cols=172 Identities=17% Similarity=0.144 Sum_probs=105.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC-CCCCcccccccCcee---------eecC----------Cceeec
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN-CIASLWQLKTYDRLR---------LHLP----------KQFCEL 91 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~-~~gg~w~~~~~~~~~---------~~~~----------~~~~~~ 91 (433)
..|||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.+......++. .... ..+..+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 46999999999999999999999999999999985 355443321110000 0000 000000
Q ss_pred CCCCCCCCC--CCCCCHHHHHHHHHHHHHHc-CCcceecceEEEEEEeCCCCeEE-EEEeecCcCCCceeEEEEeCEEEE
Q 013943 92 PLMGFPSEF--PTYPSKQQFVDYLEAYAKRF-EIRPRFNETVSQAEYDATIRFWR-VKTTVGGQKCGVEEMEYRCRWLVV 167 (433)
Q Consensus 92 ~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~-v~~~~g~~~~~~~~~~~~~d~vii 167 (433)
.....+... .....+..+...+.+.+++. ++++ +..+|+.+..++ +.+. |.+.+| ..+.+|.||+
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~--g~V~GV~t~~G--------~~i~Ad~VVL 168 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANS--GKFSSVTVRSG--------RAIQAKAAIL 168 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEET--TEEEEEEETTS--------CEEEEEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecC--CEEEEEEECCC--------cEEEeCEEEE
Confidence 000000000 01235678888888888775 7887 456899988765 3333 666655 5899999999
Q ss_pred ccCCCCCCccCCccCCCCCCCceeeccCCCCCCCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEe
Q 013943 168 ATGENAEAVVPEIEGSDEFGGDIRHTSLYKSGEDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVR 235 (433)
Q Consensus 168 AtG~~~~p~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r 235 (433)
|||.+ +..+.+.|...+ . +.+++ |+.++++++..|.+.|.+|..+..
T Consensus 169 ATG~~--s~~~i~~G~~~~------~----------~g~~v---G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 169 ACGTF--LNGLIHIGMDHF------P----------GGRST---AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp CCTTC--BTCEEEETTEEE------E----------CSSST---TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred CcCCC--CCccceeeeeee------c----------ccccc---CCchhhhhHHHHHhCCceEEeecC
Confidence 99954 333323332211 0 01111 467888999999999999876644
No 125
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.07 E-value=1.7e-09 Score=109.69 Aligned_cols=139 Identities=19% Similarity=0.136 Sum_probs=88.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccc--c--------------Cceee------------e
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKT--Y--------------DRLRL------------H 83 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~--~--------------~~~~~------------~ 83 (433)
..+||||||||++|+++|..|++.|.+|+|+|+.+..||...... + +.... .
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 358999999999999999999999999999999988776422110 0 00000 0
Q ss_pred cCC-------------ceeecCCCCCCC-------CCC-------CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEe
Q 013943 84 LPK-------------QFCELPLMGFPS-------EFP-------TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYD 136 (433)
Q Consensus 84 ~~~-------------~~~~~~~~~~~~-------~~~-------~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~ 136 (433)
.+. .++.-...++.. .++ +......+...|.+.+++.+++++++++|+++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 284 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKD 284 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEc
Confidence 000 000000011100 000 11345788899999999999999999999999886
Q ss_pred CCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 137 ATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 137 ~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
++...+-|...+. +++...+.+|.||+|||.++.
T Consensus 285 ~~g~v~Gv~~~~~----~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 285 DKGTVKGILVKGM----YKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TTSCEEEEEEEET----TTEEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeC----CCcEEEEECCeEEEeCCCccc
Confidence 5223333444421 223457999999999997653
No 126
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.06 E-value=5.6e-10 Score=106.48 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
.....+...+.+.+++.+++++++++|+++..+++ +.|.|.+.+| +..++.+|.||+|+|.++.
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~g------~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 147 VDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGFELDFGGA------EPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSEEEEECTT------SCEEEEEEEEEECCGGGHH
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceEEEEECCC------ceeEEEeCEEEECCCcchH
Confidence 35678888899999999999999999999998764 3477776643 2358999999999997653
No 127
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.05 E-value=3.9e-10 Score=111.05 Aligned_cols=136 Identities=16% Similarity=0.107 Sum_probs=85.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC--CCccccc-----ccCceeeecCC---------ceeec-CC--
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI--ASLWQLK-----TYDRLRLHLPK---------QFCEL-PL-- 93 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~--gg~w~~~-----~~~~~~~~~~~---------~~~~~-~~-- 93 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. |..+... .+..+....+. ....+ +.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 489999999999999999999999999999998753 2222110 00000000000 00000 00
Q ss_pred --CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEE-EEEeecCcCCCceeEEEEeCEEEEccC
Q 013943 94 --MGFPSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWR-VKTTVGGQKCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 94 --~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~-v~~~~g~~~~~~~~~~~~~d~viiAtG 170 (433)
..++ .......+.++...+.+.+.+.+++++++++|+++..++ +.+. |++.+. .+++..++++|.||.|+|
T Consensus 86 ~~~~~~-~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~---~~G~~~~~~ad~VV~AdG 159 (453)
T 3atr_A 86 TVWTVN-GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNR---RTNEELTVYSKVVVEATG 159 (453)
T ss_dssp CEEEEE-EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEET---TTTEEEEEECSEEEECCG
T ss_pred eEEeEC-CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEc---CCCceEEEEcCEEEECcC
Confidence 0000 001124778899999999988999999999999998876 3332 444320 012234899999999999
Q ss_pred CCCC
Q 013943 171 ENAE 174 (433)
Q Consensus 171 ~~~~ 174 (433)
..+.
T Consensus 160 ~~s~ 163 (453)
T 3atr_A 160 YSRS 163 (453)
T ss_dssp GGCT
T ss_pred Cchh
Confidence 6543
No 128
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.04 E-value=2.9e-09 Score=107.74 Aligned_cols=139 Identities=17% Similarity=0.145 Sum_probs=88.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc--------cc--------cCceee-----------ec
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL--------KT--------YDRLRL-----------HL 84 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~--------~~--------~~~~~~-----------~~ 84 (433)
..+||||||||++|+++|..|++.|.+|+|||+.+.++|.... .. .+.... ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4589999999999999999999999999999999877653211 00 000000 00
Q ss_pred CCc--------------ee---ec--------CCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEe
Q 013943 85 PKQ--------------FC---EL--------PLMGFPSEF---PTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYD 136 (433)
Q Consensus 85 ~~~--------------~~---~~--------~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~ 136 (433)
... ++ .+ ....++... .+......+...+.+.+.+.+++++++++|+++..+
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN 279 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC
Confidence 000 00 00 000011000 011346788899999999999999999999999876
Q ss_pred CCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 137 ATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 137 ~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
++...+-|...+. +++...+.+|.||+|||.++.
T Consensus 280 ~~g~v~Gv~~~~~----~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 280 DDHSVVGAVVHGK----HTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TTSBEEEEEEEET----TTEEEEEEEEEEEECCCCCTT
T ss_pred CCCcEEEEEEEeC----CCcEEEEEcCEEEEecCCccc
Confidence 5223333444321 223357999999999997654
No 129
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.04 E-value=1.1e-09 Score=104.82 Aligned_cols=63 Identities=21% Similarity=0.245 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 105 SKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 105 ~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
....+...+.+.+.+.+++++++++|++++.++ +.|.+++.++ .+.+|.||+|+|.++....+
T Consensus 147 ~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~v~~~~g---------~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 147 RSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGVTIETADG---------EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESSC---------EEEEEEEEECCGGGGGGTST
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEEEEEECCC---------eEEcCEEEEcCCccHHhhcc
Confidence 445788888888889999999999999999876 3477776653 48999999999976654443
No 130
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.03 E-value=1.2e-09 Score=113.04 Aligned_cols=61 Identities=8% Similarity=0.122 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
.....+...+.+.+.+.|++++++++|+++..++ +.|.|.+.++ .++.+|.||+|+|.++.
T Consensus 414 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~G--------~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 414 LCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCWLLNFAGD--------QQATHSVVVLANGHQIS 474 (676)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCGGGGG
T ss_pred eCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeEEEEECCC--------CEEECCEEEECCCcchh
Confidence 3567888888888999999999999999999887 4588887765 57999999999997643
No 131
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.03 E-value=2.6e-09 Score=98.26 Aligned_cols=139 Identities=14% Similarity=0.165 Sum_probs=83.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCC-ccccc-ccCceeeecCC-ceeecCCCCCCCCCCC--CCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER-GIPSILLERSNCIAS-LWQLK-TYDRLRLHLPK-QFCELPLMGFPSEFPT--YPS 105 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~~~gg-~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~ 105 (433)
..+||+|||||++|+++|..|++. |.+|+|+|+.+.+++ .|... ....+....+. .++.-...++...... ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 358999999999999999999997 999999999987765 44321 11111111000 0000001111100000 114
Q ss_pred HHHHHHHHHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeec----C-cC-CCceeEEEEeCEEEEccCC
Q 013943 106 KQQFVDYLEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVG----G-QK-CGVEEMEYRCRWLVVATGE 171 (433)
Q Consensus 106 ~~~~~~~l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g----~-~~-~~~~~~~~~~d~viiAtG~ 171 (433)
..++...+.+.+.+ .+++++++++|+++..+++ ....+.+... . .+ ..++...+.+|.||+|+|.
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~-~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN-RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETT-EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCC-eEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 56777777766655 6899999999999987753 2222333210 0 00 0123468999999999993
No 132
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.02 E-value=1.6e-09 Score=104.74 Aligned_cols=130 Identities=16% Similarity=0.133 Sum_probs=81.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC----CC-cccc-cc---cCceee-----ecCCceeec----CCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI----AS-LWQL-KT---YDRLRL-----HLPKQFCEL----PLM 94 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~----gg-~w~~-~~---~~~~~~-----~~~~~~~~~----~~~ 94 (433)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. ++ .+.. .. ...+.+ ..+.....+ ...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 579999999999999999999999999999998653 11 1000 00 000000 000000000 000
Q ss_pred CCC--CCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCC
Q 013943 95 GFP--SEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 95 ~~~--~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~ 172 (433)
... ........+..+...+.+.+ .+++++++++|++++.++ +.+++++.+| .++++|.||.|+|..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQMRFSDG--------TKAEANWVIGADGGA 152 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECS--SCEEEEETTS--------CEEEESEEEECCCTT
T ss_pred ccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECCCcc
Confidence 000 00001234566666666654 478899999999999876 5677888775 579999999999975
Q ss_pred CC
Q 013943 173 AE 174 (433)
Q Consensus 173 ~~ 174 (433)
+.
T Consensus 153 S~ 154 (397)
T 2vou_A 153 SV 154 (397)
T ss_dssp CH
T ss_pred hh
Confidence 53
No 133
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.02 E-value=2.4e-09 Score=110.83 Aligned_cols=61 Identities=10% Similarity=0.136 Sum_probs=50.1
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeE-EEEeCEEEEccCCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEM-EYRCRWLVVATGENAE 174 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~-~~~~d~viiAtG~~~~ 174 (433)
.....+...+.+.+.+.|++++++++|+++..++ +.|.|.+.+| . ++.+|.||+|+|.++.
T Consensus 409 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~G--------~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 409 LCPSDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQWQLTFGQS--------QAAKHHATVILATGHRLP 470 (689)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSEEEEEC-C--------CCCEEESEEEECCGGGTT
T ss_pred ECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeEEEEeCCC--------cEEEECCEEEECCCcchh
Confidence 3557788888888889999999999999999877 4478887765 4 7899999999997654
No 134
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.00 E-value=3.1e-09 Score=103.20 Aligned_cols=136 Identities=21% Similarity=0.108 Sum_probs=85.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCCCCCCcccccc------------------------cCceeeecCCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIP-SILLERSNCIASLWQLKT------------------------YDRLRLHLPKQ 87 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~-v~iie~~~~~gg~w~~~~------------------------~~~~~~~~~~~ 87 (433)
.+||+|||||++|+++|..|++.|++ |+|+|+.+.++....... ...+.......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 999999876542211100 00000000000
Q ss_pred --eeecCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-cC-CcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEE
Q 013943 88 --FCELPLM-GFPSEFP-TYPSKQQFVDYLEAYAKR-FE-IRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYR 161 (433)
Q Consensus 88 --~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~-~~-l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 161 (433)
....+.. ......+ ..+.+.++...+.+.+.+ .+ ++++++++|++++. + +.+++++.+. .+++..+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~v~~~~~---~~g~~~~~~ 157 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRVLIGARD---GHGKPQALG 157 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEEEEEEEE---TTSCEEEEE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccEEEEecC---CCCCceEEe
Confidence 0000000 0000111 124678888888888876 46 57999999999988 4 3466776541 012235799
Q ss_pred eCEEEEccCCCCC
Q 013943 162 CRWLVVATGENAE 174 (433)
Q Consensus 162 ~d~viiAtG~~~~ 174 (433)
+|.||.|+|..+.
T Consensus 158 ad~vV~AdG~~S~ 170 (410)
T 3c96_A 158 ADVLVGADGIHSA 170 (410)
T ss_dssp ESEEEECCCTTCH
T ss_pred cCEEEECCCccch
Confidence 9999999997653
No 135
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.99 E-value=1.5e-09 Score=101.15 Aligned_cols=141 Identities=15% Similarity=0.174 Sum_probs=83.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCC-Ccccccc-cCceeeecCC-ceeecCCCCCCC--CCCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIA-SLWQLKT-YDRLRLHLPK-QFCELPLMGFPS--EFPTYPS 105 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~g-g~w~~~~-~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 105 (433)
.+||+|||||++|+++|..|+++ |++|+|+|+...+| +.|.... +......... .++.-...++.. .+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 48999999999999999999998 99999999998766 4564322 1221111110 000000111110 0000123
Q ss_pred HHHHHHHHHHHHHH-cCCcceecceEEEEEEeCCC---------------C--e-EEEEEe------ecCcCCCceeEEE
Q 013943 106 KQQFVDYLEAYAKR-FEIRPRFNETVSQAEYDATI---------------R--F-WRVKTT------VGGQKCGVEEMEY 160 (433)
Q Consensus 106 ~~~~~~~l~~~~~~-~~l~~~~~~~v~~v~~~~~~---------------~--~-~~v~~~------~g~~~~~~~~~~~ 160 (433)
..++...+.+.+.+ .++++++++.|+++..+++. + . .-|... ++......+..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 56777777777776 48899999999988765520 1 1 111221 1100000134789
Q ss_pred EeCEEEEccCCCC
Q 013943 161 RCRWLVVATGENA 173 (433)
Q Consensus 161 ~~d~viiAtG~~~ 173 (433)
++++||+|||+.+
T Consensus 239 ~Ak~VV~ATG~~s 251 (344)
T 3jsk_A 239 NAPVIISTTGHDG 251 (344)
T ss_dssp ECSEEEECCCSSS
T ss_pred EcCEEEECCCCCc
Confidence 9999999999643
No 136
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.98 E-value=1.3e-09 Score=104.67 Aligned_cols=62 Identities=18% Similarity=0.021 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 102 TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 102 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
.......+...+.+.+.+.+++++++++|++++.++ +.|.|.+.+ ..+.+|.||+|+|.++.
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EALFIKTPS---------GDVWANHVVVASGVWSG 220 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSEEEEETT---------EEEEEEEEEECCGGGTH
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEEEEEcCC---------ceEEcCEEEECCChhHH
Confidence 345678889999999999999999999999998765 456666543 37899999999997543
No 137
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.98 E-value=4.9e-09 Score=107.53 Aligned_cols=141 Identities=18% Similarity=0.187 Sum_probs=89.1
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCCCCCccccc------------------------ccCceeeecC--
Q 013943 33 VPGPVIVGAGPSGLATAACLKE-RGIPSILLERSNCIASLWQLK------------------------TYDRLRLHLP-- 85 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~-~g~~v~iie~~~~~gg~w~~~------------------------~~~~~~~~~~-- 85 (433)
.+||+||||||+|+++|..|++ .|++|+|||+.+......+.. ....+....+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4799999999999999999999 999999999987543221110 0000000000
Q ss_pred ---Ccee---ecCCCCCCC-CCC-CCCCHHHHHHHHHHHHHHcCC--cceecceEEEEEEeCC--CCeEEEEEeecCcCC
Q 013943 86 ---KQFC---ELPLMGFPS-EFP-TYPSKQQFVDYLEAYAKRFEI--RPRFNETVSQAEYDAT--IRFWRVKTTVGGQKC 153 (433)
Q Consensus 86 ---~~~~---~~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~l--~~~~~~~v~~v~~~~~--~~~~~v~~~~g~~~~ 153 (433)
.... .++...... ..+ ....+..+...|.+.+.+.++ +++++++|++++.+++ ...+++++.+.....
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0000 011000000 001 125778899999999999876 8999999999998753 125667665300000
Q ss_pred CceeEEEEeCEEEEccCCCC
Q 013943 154 GVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 154 ~~~~~~~~~d~viiAtG~~~ 173 (433)
+++..++++|+||.|+|..+
T Consensus 192 ~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TTCEEEEEEEEEEECCCTTC
T ss_pred CCCeEEEEeCEEEECCCcch
Confidence 22346899999999999765
No 138
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.97 E-value=1.4e-09 Score=104.37 Aligned_cols=59 Identities=17% Similarity=0.111 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
.....+...+.+.+++.|++++++++|+++..++ +.|.|++.+ ..+.+|.||+|+|.++
T Consensus 151 ~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~~~V~t~~---------g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 151 IDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GAWEVRCDA---------GSYRAAVLVNAAGAWC 209 (381)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TEEEEECSS---------EEEEESEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--CeEEEEeCC---------CEEEcCEEEECCChhH
Confidence 3567888888889999999999999999999877 457777664 4799999999999765
No 139
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.97 E-value=6.1e-09 Score=104.94 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=84.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc----------------------ccCc------eeeec
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK----------------------TYDR------LRLHL 84 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~----------------------~~~~------~~~~~ 84 (433)
.+||+||||||+|+++|..|++.|++|+|||+.+..+...+.. ..+. .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 4799999999999999999999999999999987654221110 0000 00000
Q ss_pred --CCceeecCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCC
Q 013943 85 --PKQFCELPLMGF--------PSEFPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCG 154 (433)
Q Consensus 85 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~ 154 (433)
...+..+..... .........+..+...+.+.+.+. ++++++|++++.++ +.+++++.+. .+
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~v~~~~~---~~ 177 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRD--DHVRATITDL---RT 177 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECS--SCEEEEEEET---TT
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeC--CEEEEEEEEC---CC
Confidence 001111111000 000011246778888888877666 89999999999876 4566776651 01
Q ss_pred ceeEEEEeCEEEEccCCCC
Q 013943 155 VEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 155 ~~~~~~~~d~viiAtG~~~ 173 (433)
++..++++|+||.|+|..+
T Consensus 178 G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 178 GATRAVHARYLVACDGASS 196 (549)
T ss_dssp CCEEEEEEEEEEECCCTTC
T ss_pred CCEEEEEeCEEEECCCCCc
Confidence 2346899999999999765
No 140
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.94 E-value=2.2e-09 Score=104.04 Aligned_cols=128 Identities=19% Similarity=0.191 Sum_probs=76.3
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc-------cccc---cCce--------------------eeec
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLW-------QLKT---YDRL--------------------RLHL 84 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w-------~~~~---~~~~--------------------~~~~ 84 (433)
+|+||||||+|+++|..|+++|++|+|||+.+.+...- ..+. ...+ ....
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 59999999999999999999999999999986542110 0000 0000 0000
Q ss_pred CC-ceeecCC--CCCCCCCCC----CCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCcee
Q 013943 85 PK-QFCELPL--MGFPSEFPT----YPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEE 157 (433)
Q Consensus 85 ~~-~~~~~~~--~~~~~~~~~----~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~ 157 (433)
.. ....... .+....... .+.+.++.+.+.+ ..+..++++++|++++..++ +.+++++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~---~~~~~v~~~~~v~~~~~~~~-~~v~v~~~dG-------- 150 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK---GLANTIQWNKTFVRYEHIEN-GGIKIFFADG-------- 150 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHT---TCTTTEECSCCEEEEEECTT-SCEEEEETTS--------
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHh---hccceEEEEEEEEeeeEcCC-CeEEEEECCC--------
Confidence 00 0000000 000000000 1234444444433 33456899999999988765 4678888887
Q ss_pred EEEEeCEEEEccCCCCC
Q 013943 158 MEYRCRWLVVATGENAE 174 (433)
Q Consensus 158 ~~~~~d~viiAtG~~~~ 174 (433)
.++++|+||.|.|..|.
T Consensus 151 ~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 151 SHENVDVLVGADGSNSK 167 (412)
T ss_dssp CEEEESEEEECCCTTCH
T ss_pred CEEEeeEEEECCCCCcc
Confidence 68999999999997653
No 141
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.93 E-value=9.5e-09 Score=98.63 Aligned_cols=59 Identities=17% Similarity=0.008 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEE-EEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWR-VKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~-v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
.....+...+.+.+++.+++++++++|++++.++ +.|. |++.+ ..+++|.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~---------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNK---------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECC---------cEEECCEEEECcchhH
Confidence 4567888889999999999999999999999876 4555 66553 3799999999999754
No 142
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.92 E-value=4e-09 Score=105.14 Aligned_cols=39 Identities=36% Similarity=0.533 Sum_probs=32.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASL 71 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~ 71 (433)
|++|||||||++||+||..|++.|++|+|+|+++.+||.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~ 39 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGR 39 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC------
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCc
Confidence 789999999999999999999999999999999999884
No 143
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.91 E-value=8.7e-09 Score=99.49 Aligned_cols=58 Identities=26% Similarity=0.147 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 105 SKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 105 ~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
....+...+.+.+.+.+++++++++|++++.++ +.|+|.+.+ .++++|.||+|+|.++
T Consensus 151 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~v~t~~---------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 151 DVRGTLAALFTLAQAAGATLRAGETVTELVPDA--DGVSVTTDR---------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp EHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEESS---------CEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEEEEECC---------CEEEcCEEEEcCCcCh
Confidence 345677788888888899999999999999876 457676543 3699999999999653
No 144
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.90 E-value=1.4e-08 Score=101.47 Aligned_cols=61 Identities=25% Similarity=0.253 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeC-EEEEccCCCC
Q 013943 108 QFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCR-WLVVATGENA 173 (433)
Q Consensus 108 ~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d-~viiAtG~~~ 173 (433)
.+...+.+.+++.+++++++++|+++..+++....-|...+ +++..++.++ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCcEEEEEeCCeEEEeCCChh
Confidence 78889999999999999999999999987432333344443 2234579995 9999999765
No 145
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.88 E-value=1e-08 Score=98.63 Aligned_cols=59 Identities=12% Similarity=0.102 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 105 SKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 105 ~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
....+...+.+.+++.+++++++++|++++..+ +.|.+.+.+ ..+++|.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKVLTHTRVEDFDISP--DSVKIETAN---------GSYTADKLIVSMGAWNS 206 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCEEEEETT---------EEEEEEEEEECCGGGHH
T ss_pred eHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeEEEEeCC---------CEEEeCEEEEecCccHH
Confidence 457888888899999999999999999999876 346676653 47999999999996543
No 146
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.87 E-value=2e-08 Score=103.19 Aligned_cols=141 Identities=16% Similarity=0.161 Sum_probs=87.9
Q ss_pred CCCeEEECCChHHHHHHHHHHH-----cCCCEEEEecCCCCCC-------------------cccc-----cccCceeee
Q 013943 33 VPGPVIVGAGPSGLATAACLKE-----RGIPSILLERSNCIAS-------------------LWQL-----KTYDRLRLH 83 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~-----~g~~v~iie~~~~~gg-------------------~w~~-----~~~~~~~~~ 83 (433)
.+||+||||||+|+++|..|++ .|++|+|||+.+.... .|.. .....+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 9999999999764321 1100 001111111
Q ss_pred cCC---cee---ecCCCCCC-CCCC-CCCCHHHHHHHHHHHHHHcC---CcceecceEEEEEEeC------CCCeEEEEE
Q 013943 84 LPK---QFC---ELPLMGFP-SEFP-TYPSKQQFVDYLEAYAKRFE---IRPRFNETVSQAEYDA------TIRFWRVKT 146 (433)
Q Consensus 84 ~~~---~~~---~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~---l~~~~~~~v~~v~~~~------~~~~~~v~~ 146 (433)
.+. .+. .++..... .... ....+..+...|.+.+.+.+ ++++++++|++++.++ +...+++++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 000 000 01100000 0111 12578888899999888887 8999999999998875 113466665
Q ss_pred eecC----------------cC--------------------CCceeEEEEeCEEEEccCCCC
Q 013943 147 TVGG----------------QK--------------------CGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 147 ~~g~----------------~~--------------------~~~~~~~~~~d~viiAtG~~~ 173 (433)
.+.+ .. .++...++++|+||.|.|..|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S 230 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS 230 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCC
Confidence 5310 00 123446899999999999765
No 147
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.87 E-value=3.2e-09 Score=106.87 Aligned_cols=62 Identities=11% Similarity=0.128 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
..+..+..++.+.+.+.+++++.+ +|++++.+++...+.|++.+| .++.+|.||+|+|..+.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEG--------RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTS--------CEECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCC--------cEEEeCEEEECCCCchh
Confidence 466888899999999999999998 899998865433456776665 57999999999996543
No 148
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.86 E-value=2.6e-08 Score=100.81 Aligned_cols=138 Identities=19% Similarity=0.131 Sum_probs=86.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc--cc----Cce----ee-ecCCce-------------
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK--TY----DRL----RL-HLPKQF------------- 88 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~--~~----~~~----~~-~~~~~~------------- 88 (433)
.+||+|||+|++|+++|..|++.|.+|+|+|+.+.++|..... .+ ... .. ..+..+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5799999999999999999999999999999998777642210 00 000 00 000000
Q ss_pred -----------------eecCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeC
Q 013943 89 -----------------CELPLMGFP-------SEFP-------TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDA 137 (433)
Q Consensus 89 -----------------~~~~~~~~~-------~~~~-------~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~ 137 (433)
+.-...++. ..++ +......+...+.+.+++.+++++++++|+++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 000001110 0000 012367888899999999999999999999997654
Q ss_pred CCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 138 TIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 138 ~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
+...+-|...+. +++...+.+|.||+|||.++.
T Consensus 286 ~g~v~GV~~~~~----~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKGE----YTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEET----TTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeC----CCcEEEEEcCEEEEeCCCCcc
Confidence 123333444421 233457999999999996553
No 149
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.86 E-value=2.6e-08 Score=99.21 Aligned_cols=65 Identities=17% Similarity=0.095 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 105 SKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 105 ~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
....+...+.+.+.+.|++++++++|+++..++ +.|.|++.+. ..++...+++|.||+|+|.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~---~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDI---DTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEET---TTCCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEEC---CCCCEEEEECCEEEECCChhHH
Confidence 567788888888889999999999999999876 5677777531 0122357999999999997653
No 150
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.86 E-value=1.6e-08 Score=93.75 Aligned_cols=105 Identities=17% Similarity=0.274 Sum_probs=67.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCC-Ccccccc-cCceeeecCC-ceeecCCCCCCCC--CCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIA-SLWQLKT-YDRLRLHLPK-QFCELPLMGFPSE--FPTYPS 105 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~g-g~w~~~~-~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~ 105 (433)
.+||+|||||++|+++|..|++. |++|+|+|+...+| +.|.... +......... .++.-...++... +.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 36999999999999999999998 99999999998876 4564321 1111111100 0100011111111 000124
Q ss_pred HHHHHHHHHHHHHHc-CCcceecceEEEEEEeC
Q 013943 106 KQQFVDYLEAYAKRF-EIRPRFNETVSQAEYDA 137 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~-~l~~~~~~~v~~v~~~~ 137 (433)
..++...+.+.+.+. +++++.+++|+++..++
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecc
Confidence 567777777777774 88999999999998764
No 151
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.85 E-value=1.4e-08 Score=98.29 Aligned_cols=60 Identities=17% Similarity=0.084 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
.....+...+.+.+++.+++++++++|+++..+++ ..+.|.+.++ .+.+|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~g---------~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGE-KVTGVKTTRG---------TIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSS-BEEEEEETTC---------CEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCC-EEEEEEeCCc---------eEECCEEEECCchhH
Confidence 45668888899989999999999999999998753 4466666542 689999999999654
No 152
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.83 E-value=9.7e-09 Score=102.68 Aligned_cols=62 Identities=21% Similarity=0.136 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
..+..+...+.+.+.+.+++++++ +|++++.+++...+.|++.+| .++++|.||.|+|.++.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g--------~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQH--------GEISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 478889999999999999999999 999998865433456777665 57999999999996543
No 153
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.82 E-value=1.7e-08 Score=101.72 Aligned_cols=66 Identities=12% Similarity=-0.064 Sum_probs=49.6
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
.....+...+...+.+.|++++++++|+++..+++ ..+.|++.+. ..++...+++|.||.|+|.++
T Consensus 167 vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g-~v~gV~~~d~---~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARGAVALNYMKVESFIYDQG-KVVGVVAKDR---LTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEEET---TTCCEEEEEEEEEEECCGGGH
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-eEEEEEEEEc---CCCceEEEECCEEEECCCcch
Confidence 34567777888888899999999999999998763 3455666541 022346899999999999764
No 154
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.78 E-value=3.1e-08 Score=96.70 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=36.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASL 71 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~ 71 (433)
|+||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 579999999999999999999999999999998888764
No 155
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.77 E-value=2.5e-08 Score=97.12 Aligned_cols=39 Identities=31% Similarity=0.411 Sum_probs=36.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLW 72 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w 72 (433)
+||+|||||++|+++|..|++.|++|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 589999999999999999999999999999999887753
No 156
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.76 E-value=1.4e-08 Score=102.38 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHHHc-CCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 104 PSKQQFVDYLEAYAKRF-EIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~-~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
..+..+..++.+.+.+. +++++++ +|++++.+++...+.|.+.+| .++.+|.||+|+|..+
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G--------~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATG--------RVFDADLFVDCSGFRG 252 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTS--------CEEECSEEEECCGGGC
T ss_pred EcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCC--------CEEECCEEEECCCCch
Confidence 57788999999999998 9999999 999998865433456776665 5799999999999644
No 157
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.76 E-value=3.3e-08 Score=99.15 Aligned_cols=62 Identities=15% Similarity=0.106 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 104 PSKQQFVDYLEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
..+..+..++.+.+.+ .+++++++ +|++++.+++...+.|++.+| ..+++|.||.|+|..+.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQN--------GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 4778899999999998 89999999 699998865433345666654 35999999999996543
No 158
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.73 E-value=1.4e-08 Score=92.21 Aligned_cols=46 Identities=26% Similarity=0.321 Sum_probs=41.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCc
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDR 79 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~ 79 (433)
+||+||||||+|++||..|+++|++|+|||+++.+||.+.....+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~ 48 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA 48 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCC
Confidence 7999999999999999999999999999999999999776544443
No 159
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.72 E-value=1.7e-08 Score=97.71 Aligned_cols=130 Identities=18% Similarity=0.153 Sum_probs=77.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCC---------cccccccCc----------------------
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIAS---------LWQLKTYDR---------------------- 79 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg---------~w~~~~~~~---------------------- 79 (433)
.+||+|||||++|+++|+.|++. |++|+|+|+....++ .|....+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999999999 999999999754332 121111110
Q ss_pred eeeecCCceeecCCC-------------CC---------CCC-------CCCCCCHHHHHHHHHHHHHHcCCcceecceE
Q 013943 80 LRLHLPKQFCELPLM-------------GF---------PSE-------FPTYPSKQQFVDYLEAYAKRFEIRPRFNETV 130 (433)
Q Consensus 80 ~~~~~~~~~~~~~~~-------------~~---------~~~-------~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v 130 (433)
........+...... .+ +.. ..+......+...+.+.+.+.+++++++++|
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v 195 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRA 195 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEE
Confidence 000000000000000 00 000 0112345678888888888889999999999
Q ss_pred E---------EEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 131 S---------QAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 131 ~---------~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
+ ++..++ +.|.|.+.+ ..+++|.||+|+|.++
T Consensus 196 ~~~~g~~~~~~i~~~~--~~v~v~~~~---------g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 196 ELVPGGVRLHRLTVTN--THQIVVHET---------RQIRAGVIIVAAGAAG 236 (405)
T ss_dssp EEETTEEEEECBCC---------CBCC---------EEEEEEEEEECCGGGH
T ss_pred EeccccccccceEeeC--CeEEEEECC---------cEEECCEEEECCCccH
Confidence 8 776554 344454433 4799999999999754
No 160
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.72 E-value=2.3e-08 Score=97.29 Aligned_cols=40 Identities=38% Similarity=0.521 Sum_probs=36.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccc
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQ 73 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~ 73 (433)
+||+|||||++|+++|..|++.|++|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeE
Confidence 4799999999999999999999999999999998887543
No 161
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.69 E-value=7.9e-08 Score=92.34 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=81.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+... ....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------------------~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG--------------------------------LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc--------------------------------ccCHHHHHH
Confidence 478999999999999999999999999999998643110 113567778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.++ +.+.+.+.++ .++.+|.||+|+| .+|+.
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~g--------~~i~~d~vv~a~G--~~p~~ 245 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAG--EGLEAHLSDG--------EVIPCDLVVSAVG--LRPRT 245 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECcC--CCcCH
Confidence 8888888999999999999998765 4566777765 6899999999999 55543
No 162
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.69 E-value=1.7e-08 Score=99.67 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=36.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC------CCEEEEecCCCCCCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG------IPSILLERSNCIASL 71 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g------~~v~iie~~~~~gg~ 71 (433)
++||+|||||++|+++|+.|++.| ++|+|+|+++.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 589999999999999999999999 999999999888874
No 163
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.68 E-value=8.4e-08 Score=94.36 Aligned_cols=100 Identities=22% Similarity=0.222 Sum_probs=80.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|++|+.+|..|.+.|.+|+++|+.+.+. + ....++.+.+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~l 214 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRAA 214 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHHH
Confidence 689999999999999999999999999999986331 0 0125667778
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.++ +.+.+.+.++ ..+.+|.||+|+| .+|+.+
T Consensus 215 ~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~~D~vv~A~G--~~p~~~ 267 (455)
T 2yqu_A 215 ERVFKKQGLTIRTGVRVTAVVPEA--KGARVELEGG--------EVLEADRVLVAVG--RRPYTE 267 (455)
T ss_dssp HHHHHHHTCEEECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEECCT
T ss_pred HHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECCC--------eEEEcCEEEECcC--CCcCCC
Confidence 888888899999999999999876 4566666554 6799999999999 555543
No 164
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.66 E-value=1.3e-07 Score=100.05 Aligned_cols=60 Identities=20% Similarity=0.070 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
.....+...+.+.+.+.|++++.+++|++++.+++ ..+.|.+.+ .++++|.||+|+|.++
T Consensus 148 v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~-~v~~V~t~~---------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 148 ASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGG-RVTGVQTAD---------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred EcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCC-EEEEEEECC---------cEEECCEEEECCccch
Confidence 35678888899999999999999999999998663 233455554 3799999999999764
No 165
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.66 E-value=9.8e-08 Score=96.68 Aligned_cols=139 Identities=16% Similarity=0.061 Sum_probs=84.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCc--ccc-------cc--cCceeee------cCCce-------
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASL--WQL-------KT--YDRLRLH------LPKQF------- 88 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~--w~~-------~~--~~~~~~~------~~~~~------- 88 (433)
.+||||||||++|+++|..|++.|.+|+|+||....+|. |.. .. .+..... .....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 86 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 479999999999999999999999999999998754321 111 00 0000000 00000
Q ss_pred ------------eecCCCCCCC---------CCCC---------C--------CCHHHHHHHHHHHHHHcCCcceecceE
Q 013943 89 ------------CELPLMGFPS---------EFPT---------Y--------PSKQQFVDYLEAYAKRFEIRPRFNETV 130 (433)
Q Consensus 89 ------------~~~~~~~~~~---------~~~~---------~--------~~~~~~~~~l~~~~~~~~l~~~~~~~v 130 (433)
+.-...++.. .+.+ . .+...+...+.+.+.+.++++++++.|
T Consensus 87 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v 166 (588)
T 2wdq_A 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYA 166 (588)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEE
Confidence 0000011110 0000 0 124678888888888899999999999
Q ss_pred EEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCC
Q 013943 131 SQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAE 174 (433)
Q Consensus 131 ~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~ 174 (433)
+++..+++...+-|...+. .+++...+.++.||+|||.++.
T Consensus 167 ~~L~~~~~g~v~Gv~~~~~---~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 167 LDLVKNQDGAVVGCTALCI---ETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp EEEEECTTSCEEEEEEEET---TTCCEEEEEEEEEEECCCCCGG
T ss_pred EEEEECCCCEEEEEEEEEc---CCCeEEEEEcCEEEECCCCCcc
Confidence 9998753223333443320 0233457999999999997654
No 166
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.64 E-value=8.4e-08 Score=94.90 Aligned_cols=40 Identities=28% Similarity=0.332 Sum_probs=36.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCCCCCCcc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI--PSILLERSNCIASLW 72 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~~~gg~w 72 (433)
++||+|||||++|+++|+.|++.|. +|+|+|+++.+||..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 5799999999999999999999999 999999998888744
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.62 E-value=1.7e-07 Score=92.28 Aligned_cols=104 Identities=19% Similarity=0.189 Sum_probs=81.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||||+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.+.+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 216 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP---------------------------------QGDPETAALL 216 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999999864310 0135677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEe-ecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTT-VGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~-~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.++ +.+.+++. +. .++...+.+|.||+|+| .+|+.+
T Consensus 217 ~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~----~g~~~~i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 217 RRALEKEGIRVRTKTKAVGYEKKK--DGLHVRLEPAE----GGEGEEVVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETT----CCSCEEEEESEEEECSC--EEESCT
T ss_pred HHHHHhcCCEEEcCCEEEEEEEeC--CEEEEEEeecC----CCceeEEEcCEEEECCC--cccCCC
Confidence 888889999999999999998765 44556655 30 02234899999999999 666554
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.61 E-value=4.8e-07 Score=91.80 Aligned_cols=140 Identities=18% Similarity=0.108 Sum_probs=82.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCC--cccccc----c---Cceeee------cCCce-------
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIAS--LWQLKT----Y---DRLRLH------LPKQF------- 88 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg--~w~~~~----~---~~~~~~------~~~~~------- 88 (433)
.+||||||||++|+++|..|++.| .+|+|+|+....++ .|...- . +..... .....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 489999999999999999999999 99999999864322 111100 0 000000 00000
Q ss_pred ------------eecCCCCCCC---------CCCCC----------CCHHHHHHHHHHHHHHcC-CcceecceEEEEEEe
Q 013943 89 ------------CELPLMGFPS---------EFPTY----------PSKQQFVDYLEAYAKRFE-IRPRFNETVSQAEYD 136 (433)
Q Consensus 89 ------------~~~~~~~~~~---------~~~~~----------~~~~~~~~~l~~~~~~~~-l~~~~~~~v~~v~~~ 136 (433)
+.-...++.. .+.+. .+...+...+.+.+.+.+ +++++++.|+++..+
T Consensus 85 ~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~ 164 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD 164 (602)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe
Confidence 0000011100 00010 124577788888887777 899999999999876
Q ss_pred CCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCc
Q 013943 137 ATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAV 176 (433)
Q Consensus 137 ~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~ 176 (433)
++ ...-+...+. .+++...+.++.||+|||.++...
T Consensus 165 ~g-~v~Gv~~~~~---~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 165 DG-HVRGLVAMNM---MEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp TT-EEEEEEEEET---TTTEEEEEECSCEEECCCCCGGGS
T ss_pred CC-EEEEEEEEEc---CCCcEEEEEcCeEEECCCCCcccc
Confidence 53 2222322210 023345799999999999766543
No 169
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.59 E-value=3.9e-07 Score=92.49 Aligned_cols=140 Identities=19% Similarity=0.114 Sum_probs=84.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC--------cccccc---cCceeee------cCCc-------
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIAS--------LWQLKT---YDRLRLH------LPKQ------- 87 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg--------~w~~~~---~~~~~~~------~~~~------- 87 (433)
..+||||||||++|+++|+.|++.|.+|+|+||....++ .+.... .+..... ....
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 348999999999999999999999999999999864332 221100 0000000 0000
Q ss_pred ------------eeecCCCCCCC---------CCCC---------------C---CCHHHHHHHHHHHHHHcCCcceecc
Q 013943 88 ------------FCELPLMGFPS---------EFPT---------------Y---PSKQQFVDYLEAYAKRFEIRPRFNE 128 (433)
Q Consensus 88 ------------~~~~~~~~~~~---------~~~~---------------~---~~~~~~~~~l~~~~~~~~l~~~~~~ 128 (433)
++.-...++.. .+.+ + .+...+...+.+.+.+.+++++.++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~ 176 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY 176 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEce
Confidence 00000111100 0000 0 1345778888888888899999999
Q ss_pred eEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 129 TVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 129 ~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
.|+++..+++ ...-+...+. ..++...+.++.||+|||.++..
T Consensus 177 ~v~~Li~~~g-~v~Gv~~~~~---~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 177 FALDLLMENG-ECRGVIALCI---EDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEEETT-EEEEEEEEET---TTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEEEEECC-EEEEEEEEEc---CCCcEEEEEcCeEEECCCccccc
Confidence 9999987642 2222433320 02334589999999999976653
No 170
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=3.5e-07 Score=89.94 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=80.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.+.+
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 217 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS---------------------------------GFEKQMAAII 217 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------------TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999999864310 0125677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.++ +.+.+++.+ +++...+.+|.||+|+| .+|+.+
T Consensus 218 ~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~-----~g~~~~~~~D~vv~a~G--~~p~~~ 273 (455)
T 1ebd_A 218 KKRLKKKGVEVVTNALAKGAEERE--DGVTVTYEA-----NGETKTIDADYVLVTVG--RRPNTD 273 (455)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEE-----TTEEEEEEESEEEECSC--EEESCS
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEEe-----CCceeEEEcCEEEECcC--CCcccC
Confidence 888889999999999999998765 345555541 11126799999999999 656543
No 171
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.57 E-value=2.6e-07 Score=90.66 Aligned_cols=101 Identities=15% Similarity=0.097 Sum_probs=81.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. .-..++.+.+
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 214 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP---------------------------------SFDPMISETL 214 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh---------------------------------hhhHHHHHHH
Confidence 6899999999999999999999999999999863310 0124567788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.+++ ..+.+++.+| ..+.+|.||+|+| .+|+..
T Consensus 215 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~g--------~~i~~D~vv~a~G--~~p~~~ 268 (450)
T 1ges_A 215 VEVMNAEGPQLHTNAIPKAVVKNTD-GSLTLELEDG--------RSETVDCLIWAIG--REPAND 268 (450)
T ss_dssp HHHHHHHSCEEECSCCEEEEEECTT-SCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCC-cEEEEEECCC--------cEEEcCEEEECCC--CCcCCC
Confidence 8888889999999999999987653 3356777765 5899999999999 566553
No 172
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.57 E-value=1.4e-07 Score=92.59 Aligned_cols=62 Identities=23% Similarity=0.155 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEe--------------CCCCeEEEEEeecCcCCCceeEEE--EeCEEEE
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYD--------------ATIRFWRVKTTVGGQKCGVEEMEY--RCRWLVV 167 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~--------------~~~~~~~v~~~~g~~~~~~~~~~~--~~d~vii 167 (433)
.....+...+.+.+.+.+++++++++|+++..+ .+...+.|.+.++ ++ .+|.||+
T Consensus 178 ~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g---------~i~~~Ad~VV~ 248 (448)
T 3axb_A 178 LDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG---------TRVEVGEKLVV 248 (448)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS---------CEEEEEEEEEE
T ss_pred EcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC---------EEeecCCEEEE
Confidence 356688888888899999999999999999872 2212345665542 57 9999999
Q ss_pred ccCCCCC
Q 013943 168 ATGENAE 174 (433)
Q Consensus 168 AtG~~~~ 174 (433)
|+|.++.
T Consensus 249 AtG~~s~ 255 (448)
T 3axb_A 249 AAGVWSN 255 (448)
T ss_dssp CCGGGHH
T ss_pred CCCcCHH
Confidence 9997543
No 173
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.57 E-value=5.1e-07 Score=92.35 Aligned_cols=66 Identities=6% Similarity=0.003 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCC
Q 013943 106 KQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEA 175 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p 175 (433)
...+...+.+.+.+.+++++.++.|+++..+++ ...-+...+. ..++...+.++.||+|||.++..
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g-~v~Gv~~~~~---~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDG-KCYGAVVRDL---VTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEEET---TTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCC-EEEEEEEEEC---CCCcEEEEEcCEEEEccCcchhh
Confidence 457888888888888999999999999987542 2222333210 02334579999999999976543
No 174
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.57 E-value=1.6e-07 Score=92.03 Aligned_cols=101 Identities=24% Similarity=0.284 Sum_probs=78.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|++|+.+|..|.+.|.+|+++|+.+.+... ....++.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 196 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------YLDKEFTDV 196 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------cCCHHHHHH
Confidence 478999999999999999999999999999998743110 012567788
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+.+++.+++++++++|++++.++ ..+.+.+ ++ ..+.+|.||+|+| .+|+.+
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~~--~v~~v~~-~~--------~~i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGDG--RVQKVVT-DK--------NAYDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECSS--BCCEEEE-SS--------CEEECSEEEECSC--EEESCG
T ss_pred HHHHHHhCCCEEEcCCEEEEEEccC--cEEEEEE-CC--------CEEECCEEEECcC--CCCChH
Confidence 8888888999999999999998652 3333544 33 5789999999999 666554
No 175
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.56 E-value=3.5e-07 Score=90.51 Aligned_cols=107 Identities=14% Similarity=0.165 Sum_probs=81.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||||+.|+.+|..|.+.|.+|+++++.+.+... ...++.+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~~l 230 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS---------------------------------MDGEVAKAT 230 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS---------------------------------SCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc---------------------------------cCHHHHHHH
Confidence 68999999999999999999999999999998744211 125677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++..++.+.+.+.+.+. ..++...+.+|.||+|+| .+|+..
T Consensus 231 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~~~~~~D~vv~a~G--~~p~~~ 290 (478)
T 1v59_A 231 QKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDT---KTNKQENLEAEVLLVAVG--RRPYIA 290 (478)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEET---TTTEEEEEEESEEEECSC--EEECCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEc---CCCCceEEECCEEEECCC--CCcCCC
Confidence 888899999999999999998731224455666520 011126799999999999 666543
No 176
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.56 E-value=2.6e-07 Score=93.35 Aligned_cols=65 Identities=12% Similarity=-0.016 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCC
Q 013943 105 SKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENA 173 (433)
Q Consensus 105 ~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~ 173 (433)
....+...+...+.+.|++++++++|+++..+++ ..|.|.+.+. ..++...+++|.||+|+|.++
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~-~v~gV~~~d~---~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGD-QIVGVKARDL---LTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETT-EEEEEEEEET---TTCCEEEEEBSCEEECCGGGH
T ss_pred chHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCC-EEEEEEEEEc---CCCCEEEEEcCEEEECCChhH
Confidence 4455666677778888999999999999998764 3455665421 011124799999999999765
No 177
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.56 E-value=4e-07 Score=88.35 Aligned_cols=102 Identities=22% Similarity=0.290 Sum_probs=82.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA--------------------------------RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh--------------------------------hhcCHHHHHH
Confidence 46799999999999999999999999999999874310 0123677888
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.+++ ....|.+.+| ..+.+|.||+|+| .+|+.
T Consensus 200 l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~v~l~dG--------~~i~aD~Vv~a~G--~~p~~ 253 (415)
T 3lxd_A 200 YQAEHRAHGVDLRTGAAMDCIEGDGT-KVTGVRMQDG--------SVIPADIVIVGIG--IVPCV 253 (415)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEESSS-BEEEEEESSS--------CEEECSEEEECSC--CEESC
T ss_pred HHHHHHhCCCEEEECCEEEEEEecCC-cEEEEEeCCC--------CEEEcCEEEECCC--CccCh
Confidence 88899999999999999999987643 3335777776 6899999999999 55554
No 178
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.55 E-value=2.4e-08 Score=95.84 Aligned_cols=119 Identities=18% Similarity=0.097 Sum_probs=74.9
Q ss_pred CCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCC---CCcc--ccccc----------Cc-eee----ecCCceeec
Q 013943 34 PGPVIVGAGPSGLATAACLKER--GIPSILLERSNCI---ASLW--QLKTY----------DR-LRL----HLPKQFCEL 91 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~---gg~w--~~~~~----------~~-~~~----~~~~~~~~~ 91 (433)
.||+|||||++|+++|..|++. |++|+|+|+.+.+ |... ..+.. +. +.. .....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3799999999999999999999 9999999998765 2110 00000 00 000 00000000
Q ss_pred CCCCCCCC--CC-CCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEc
Q 013943 92 PLMGFPSE--FP-TYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVA 168 (433)
Q Consensus 92 ~~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiA 168 (433)
....+... .+ ....+.++.+.+.+.+.+.+++++++++|++++.. ..+++|.||.|
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~---------------------~~~~ad~vV~A 138 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL---------------------PLADYDLVVLA 138 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC---------------------CGGGCSEEEEC
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc---------------------ccccCCEEEEC
Confidence 00000000 00 12478899999999999989999999988665321 12368999999
Q ss_pred cCCCCC
Q 013943 169 TGENAE 174 (433)
Q Consensus 169 tG~~~~ 174 (433)
+|..+.
T Consensus 139 dG~~S~ 144 (381)
T 3c4a_A 139 NGVNHK 144 (381)
T ss_dssp CGGGGG
T ss_pred CCCCch
Confidence 997665
No 179
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.54 E-value=1.6e-07 Score=94.21 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=33.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIAS 70 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg 70 (433)
.+||||||||++|+++|..|++ |.+|+|+||....+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 4899999999999999999999 999999999976553
No 180
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.54 E-value=3.9e-07 Score=89.73 Aligned_cols=100 Identities=17% Similarity=0.111 Sum_probs=80.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -..++.+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~l 213 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------------------------------Q--FDPLLSATL 213 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------------------------------c--cCHHHHHHH
Confidence 6899999999999999999999999999998863310 0 124566778
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeE-EEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEM-EYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~-~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.+++ .+.+++.+| . ++.+|.||+|+| .+|+..
T Consensus 214 ~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~G--------~~~i~~D~vv~a~G--~~p~~~ 267 (463)
T 2r9z_A 214 AENMHAQGIETHLEFAVAALERDAQ--GTTLVAQDG--------TRLEGFDSVIWAVG--RAPNTR 267 (463)
T ss_dssp HHHHHHTTCEEESSCCEEEEEEETT--EEEEEETTC--------CEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeCC--eEEEEEeCC--------cEEEEcCEEEECCC--CCcCCC
Confidence 8888889999999999999987653 366777665 4 799999999999 556553
No 181
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=3.8e-07 Score=88.19 Aligned_cols=102 Identities=21% Similarity=0.276 Sum_probs=81.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~--------------------------------~~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA--------------------------------RVVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh--------------------------------hccCHHHHHH
Confidence 36899999999999999999999999999998863310 0123567888
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.+++ ....|.+.+| ..+.+|.||+|+| .+|+.
T Consensus 190 l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~V~~~dG--------~~i~aD~Vv~a~G--~~p~~ 243 (404)
T 3fg2_P 190 FHDRHSGAGIRMHYGVRATEIAAEGD-RVTGVVLSDG--------NTLPCDLVVVGVG--VIPNV 243 (404)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-EEEEEEETTS--------CEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCcEEEECCEEEEEEecCC-cEEEEEeCCC--------CEEEcCEEEECcC--CccCH
Confidence 88889999999999999999987653 3334777776 6899999999999 55543
No 182
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.50 E-value=7.7e-08 Score=88.38 Aligned_cols=191 Identities=10% Similarity=0.109 Sum_probs=101.9
Q ss_pred CeEEEECCCCcHHHHHHHHhcc-CCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccc
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNH-DAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTAR 283 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~-g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 283 (433)
..|+|||+|++|+.+|..|++. |.+|+++.+.+. +..........+ ... .+.....+ ++..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~-~gg~~~~~~~~~--~~~---~~~~~~~~----~l~~-------- 101 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS-PGGGAWLGGQLF--SAM---IVRKPAHL----FLDE-------- 101 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS-CCTTTTCCSTTC--CCE---EEETTTHH----HHHH--------
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC-CCCceecCCcch--HHH---HcCcHHHH----HHHH--------
Confidence 4799999999999999999997 999999998862 211000000000 000 00000000 0111
Q ss_pred cCCCCCCCCcccccccCCCccccCchhhhhhhc-CCeEEecC--ceEEe--CC---eEEEc---------CC-----cEe
Q 013943 284 FGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKS-GHIRVFPG--IKRLK--RY---AVEFV---------NG-----RCE 341 (433)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~~~--~~---~v~~~---------~g-----~~~ 341 (433)
.++........... .....+...+.+.+.+ .+++++.+ +.++. ++ ++.+. ++ .++
T Consensus 102 ~G~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i 178 (284)
T 1rp0_A 102 IGVAYDEQDTYVVV---KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 178 (284)
T ss_dssp HTCCCEECSSEEEE---SCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEE
T ss_pred cCCCcccCCCEEEe---cCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEE
Confidence 11111000000000 0011122233344433 68998877 66663 33 34442 22 568
Q ss_pred cccEEEEccCCCCCCCCccccc----c----ccccCCCCc-------CCCCCCCCCCCCceEEeeecccc----------
Q 013943 342 NFDAIILATGYRSNVPSWLKES----E----MFSRKDGLP-------RRPFPNGWKGESGLYSVGFTKRG---------- 396 (433)
Q Consensus 342 ~~D~vi~atG~~~~~~~~~~~~----~----l~~~~~g~~-------~~~~~~~~~~~~~iya~Gd~~~~---------- 396 (433)
++|.||.|+|..++...+.... + +.. ..|.. +++ ...+..|++|++|+++..
T Consensus 179 ~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~-~~g~~~~~~~~~~v~--~~~~~~p~i~a~G~~~~~~~g~~~~gp~ 255 (284)
T 1rp0_A 179 EAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPG-MKALDMNTAEDAIVR--LTREVVPGMIVTGMEVAEIDGAPRMGPT 255 (284)
T ss_dssp EEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCC-CEEECHHHHHHHHHH--HCEEEETTEEECTHHHHHHHTCEECCSC
T ss_pred ECCEEEECCCCchHHHHHHHHHhhhccCCCCcCC-cCCchhhhhhHHHhh--ccccccCCEEEEeeehhhhcCCCCcChH
Confidence 9999999999988764433222 1 111 11211 111 123456999999988732
Q ss_pred cccchhhHHHHHHHHHhhhccCC
Q 013943 397 LLGVAMDAKRIAQDIESCWKAKA 419 (433)
Q Consensus 397 ~~~a~~~g~~~a~~i~~~l~~~~ 419 (433)
...+..+|+.+|.+|...|++.+
T Consensus 256 ~~~~~~sG~~~a~~i~~~l~~~~ 278 (284)
T 1rp0_A 256 FGAMMISGQKAGQLALKALGLPN 278 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhHHHHHHHHHHHhhhhh
Confidence 23567899999999999987654
No 183
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.49 E-value=4.6e-07 Score=87.69 Aligned_cols=97 Identities=24% Similarity=0.296 Sum_probs=78.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++...
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR--------------------------------AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc--------------------------------ccCHHHHHH
Confidence 478999999999999999999999999999998743110 012566778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++ + + .|++.+| ..+.+|.||+|+| .+|+.
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~--~--~--~v~~~~g--------~~i~~D~vi~a~G--~~p~~ 241 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV--D--G--VVLLDDG--------TRIAADMVVVGIG--VLAND 241 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE--T--T--EEEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCcEEEeCCEEEEEE--C--C--EEEECCC--------CEEEcCEEEECcC--CCccH
Confidence 8888889999999999999998 3 2 3667665 6899999999999 55543
No 184
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=7.6e-07 Score=88.55 Aligned_cols=101 Identities=18% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .-..++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR---------------------------------KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc---------------------------------ccchhhHHH
Confidence 36899999999999999999999999999999764310 012567778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEE-EEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEME-YRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~-~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.+++ +.+.+.+.+| .. +.+|.||+|+| .+|+.
T Consensus 223 l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~g--------~~~~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINIVTFADVVEIKKVSD-KNLSIHLSDG--------RIYEHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESST-TCEEEEETTS--------CEEEEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCC-ceEEEEECCC--------cEEEECCEEEECCC--CCcCC
Confidence 88888999999999999999987643 2356777665 34 89999999999 55654
No 185
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.49 E-value=8.2e-07 Score=88.65 Aligned_cols=100 Identities=14% Similarity=0.036 Sum_probs=82.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
.+++|||||+.|+.+|..+.+.|.+|+++++...+. .-..++...+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~----------------------------------~~D~ei~~~l 269 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR----------------------------------GFDQQCAVKV 269 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST----------------------------------TSCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc----------------------------------ccchhHHHHH
Confidence 689999999999999999999999999998754221 1136678888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPE 179 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~ 179 (433)
.+.+++.++.++++..++.++..+ ..+.+...++ ..+.+|.|++|+| .+|+...
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~--------~~~~~D~vLvAvG--R~Pnt~~ 323 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDK--------TSELYDTVLYAIG--RKGDIDG 323 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEESCGG
T ss_pred HHHHHhhcceeecceEEEEEEecC--CeEEEEEcCC--------CeEEEEEEEEccc--ccCCccc
Confidence 999999999999999999999877 5666777665 5788999999999 7776653
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.48 E-value=5.7e-07 Score=87.68 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=79.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE--------------------------------RVTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc--------------------------------chhhHHHHHH
Confidence 36899999999999999999999999999998763310 0123566777
Q ss_pred HHHHHHHcCCcceecceEEEEEE--eCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEY--DATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~--~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++. .++ ....+.+.+| ..+.+|.||+|+| .+|+.
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~v~~v~~~~G--------~~i~~D~Vv~a~G--~~p~~ 252 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQ-KVTAVLCEDG--------TRLPADLVIAGIG--LIPNC 252 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTC-CEEEEEETTS--------CEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCC-cEEEEEeCCC--------CEEEcCEEEECCC--CCcCc
Confidence 88888889999999999999986 332 3335677665 6799999999999 55543
No 187
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.47 E-value=1.8e-07 Score=90.67 Aligned_cols=101 Identities=16% Similarity=0.229 Sum_probs=81.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 468999999999999999999999999999998633100 012566778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.++ ....|++.+| ..+.+|.||+|+| .+|+.
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~dg--------~~i~aD~Vv~a~G--~~p~~ 243 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASDG--------RSFVADSALICVG--AEPAD 243 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECCC--------CEEEcCEEEEeeC--CeecH
Confidence 8888889999999999999998754 4445777776 6899999999999 55553
No 188
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.47 E-value=7.3e-07 Score=88.09 Aligned_cols=107 Identities=15% Similarity=0.209 Sum_probs=80.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... .-..++..++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~l 226 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------------------------------GIDMEISKNF 226 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------------------------------SCCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------------------------------ccCHHHHHHH
Confidence 68999999999999999999999999999998743110 0125677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.+++ ..+.++..+.. .++...+.+|.||+|+| .+|+..
T Consensus 227 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~---~~~~~~i~~D~vv~a~G--~~p~~~ 285 (474)
T 1zmd_A 227 QRILQKQGFKFKLNTKVTGATKKSD-GKIDVSIEAAS---GGKAEVITCDVLLVCIG--RRPFTK 285 (474)
T ss_dssp HHHHHHTTCEEECSEEEEEEEECTT-SCEEEEEEETT---SCCCEEEEESEEEECSC--EEECCT
T ss_pred HHHHHHCCCEEEeCceEEEEEEcCC-ceEEEEEEecC---CCCceEEEcCEEEECcC--CCcCCC
Confidence 8888999999999999999987653 22555542100 00126799999999999 556543
No 189
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.46 E-value=1.9e-06 Score=88.30 Aligned_cols=144 Identities=14% Similarity=0.027 Sum_probs=82.0
Q ss_pred CCCCeEEECCChHHHHHHHHHH---H-cCCCEEEEecCCCCCC-cccc-----cc-cCce---e-eecCCce--------
Q 013943 32 CVPGPVIVGAGPSGLATAACLK---E-RGIPSILLERSNCIAS-LWQL-----KT-YDRL---R-LHLPKQF-------- 88 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~---~-~g~~v~iie~~~~~gg-~w~~-----~~-~~~~---~-~~~~~~~-------- 88 (433)
..+||||||||++|+++|..|+ + .|.+|+|+||....++ .|.. .. +... . .+.+..+
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 3489999999999999999999 6 7999999999874321 1211 10 0000 0 0000000
Q ss_pred ---e-------------------ecCCCCCCCCCCC--C--------CCHHHHHHHHHHHHHHc-CC-cceecceEEEEE
Q 013943 89 ---C-------------------ELPLMGFPSEFPT--Y--------PSKQQFVDYLEAYAKRF-EI-RPRFNETVSQAE 134 (433)
Q Consensus 89 ---~-------------------~~~~~~~~~~~~~--~--------~~~~~~~~~l~~~~~~~-~l-~~~~~~~v~~v~ 134 (433)
. .-...++.....+ + .....+...+.+.+++. ++ +++.++.|+++.
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~ 180 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELL 180 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEE
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEE
Confidence 0 0001111100000 0 01334566677777777 99 899999999998
Q ss_pred EeCC--CCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 135 YDAT--IRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 135 ~~~~--~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+++ ....-+...+. ..++...+.++.||+|||.++....|
T Consensus 181 ~~~~~~g~v~Gv~~~~~---~~g~~~~i~A~~VVlAtGG~~~~y~~ 223 (643)
T 1jnr_A 181 KDNNDPNAVAGAVGFSV---REPKFYVFKAKAVILATGGATLLFRP 223 (643)
T ss_dssp ECTTCTTBEEEEEEEES---SSSCEEEEECSEEEECCCCBCSSSCC
T ss_pred EcCCccceeEEEEEEEe---cCCcEEEEEcCEEEECCCcccccccC
Confidence 7653 12222332110 02223578999999999987664444
No 190
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.46 E-value=9.8e-07 Score=87.75 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=81.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++...+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~~l 229 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-------------------------------Y--EDADAALVL 229 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-------------------------------C--SSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------------------c--cCHHHHHHH
Confidence 7899999999999999999999999999999873310 0 124677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.++ +.+.+.+.++ .++.+|.||+|+| .+|+..
T Consensus 230 ~~~l~~~GV~i~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G--~~p~~~ 282 (499)
T 1xdi_A 230 EESFAERGVRLFKNARAASVTRTG--AGVLVTMTDG--------RTVEGSHALMTIG--SVPNTS 282 (499)
T ss_dssp HHHHHHTTCEEETTCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCC--EEECCS
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC--CEEEEEECCC--------cEEEcCEEEECCC--CCcCCC
Confidence 888899999999999999998765 3356666554 6799999999999 555543
No 191
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.45 E-value=9.1e-07 Score=87.23 Aligned_cols=97 Identities=20% Similarity=0.133 Sum_probs=78.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 222 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEAV 222 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHHH
Confidence 689999999999999999999999999999976331 1 124677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+++.+++++++++|++++.++ ..+.+.+.+ .++.+|.||+|+| .+|+.
T Consensus 223 ~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~---------~~i~aD~Vv~a~G--~~p~~ 273 (467)
T 1zk7_A 223 TAAFRAEGIEVLEHTQASQVAHMD--GEFVLTTTH---------GELRADKLLVATG--RTPNT 273 (467)
T ss_dssp HHHHHHTTCEEETTCCEEEEEEET--TEEEEEETT---------EEEEESEEEECSC--EEESC
T ss_pred HHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEECC---------cEEEcCEEEECCC--CCcCC
Confidence 888889999999999999998765 455566542 5799999999999 55553
No 192
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.45 E-value=8e-07 Score=87.76 Aligned_cols=101 Identities=21% Similarity=0.217 Sum_probs=81.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKER-GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
-++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+.. .....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP--------------------------------GFTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST--------------------------------TTSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc--------------------------------cccCHHHHH
Confidence 46899999999999999999999 999999998763310 011256778
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+.+++.+++++++++|++++..+ +.+++.+.++ .++.+|.||+|+| .+|+.
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G--~~p~~ 260 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDK--------RTLDADLVILAAG--VSPNT 260 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCC--------CEEEcCEEEECCC--CCcCH
Confidence 88888899999999999999998754 4556777765 5899999999999 55543
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.44 E-value=9.6e-07 Score=86.68 Aligned_cols=102 Identities=16% Similarity=0.127 Sum_probs=78.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK--------------------------------YFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh--------------------------------hhhhhHHHH
Confidence 467999999999999999999999999999998633100 012567788
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+.+++.+++++++++|++++..+ +.+.....++ .++.+|.||+|+| .+|+.+
T Consensus 197 l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g--------~~i~~D~vv~a~G--~~p~~~ 250 (452)
T 2cdu_A 197 LAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDG--------KEIKSDIAILCIG--FRPNTE 250 (452)
T ss_dssp HHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCC--EEECCG
T ss_pred HHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCC--------CEEECCEEEECcC--CCCCHH
Confidence 8888999999999999999998644 3333222243 5799999999999 656544
No 194
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.44 E-value=1.3e-06 Score=86.07 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=80.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 218 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP---------------------------------NEDADVSKEI 218 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999999864310 0125677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.+++ .+.+.+.+ +++..++.+|.||+|+| .+|+..
T Consensus 219 ~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~-----~g~~~~~~~D~vv~a~G--~~p~~~ 274 (464)
T 2a8x_A 219 EKQFKKLGVTILTATKVESIADGGS--QVTVTVTK-----DGVAQELKAEKVLQAIG--FAPNVE 274 (464)
T ss_dssp HHHHHHHTCEEECSCEEEEEEECSS--CEEEEEES-----SSCEEEEEESEEEECSC--EEECCS
T ss_pred HHHHHHcCCEEEeCcEEEEEEEcCC--eEEEEEEc-----CCceEEEEcCEEEECCC--CCccCC
Confidence 8888889999999999999987653 34555541 11235789999999999 666543
No 195
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.43 E-value=9.2e-07 Score=87.71 Aligned_cols=100 Identities=18% Similarity=0.127 Sum_probs=81.2
Q ss_pred CCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKER---GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~---g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
++++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. .-..++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~ 234 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR---------------------------------GFDSELR 234 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST---------------------------------TSCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc---------------------------------ccCHHHH
Confidence 6899999999999999999999 999999999874310 0124677
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
..+.+.+++.+++++++++|++++.+++ +.+.+++.+| ..+.+|.||+|+| .+|+.
T Consensus 235 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 235 KQLTEQLRANGINVRTHENPAKVTKNAD-GTRHVVFESG--------AEADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp HHHHHHHHHTTEEEEETCCEEEEEECTT-SCEEEEETTS--------CEEEESEEEECSC--EEESC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEEECCC--------cEEEcCEEEEccC--CCcCc
Confidence 8888888999999999999999987653 3456777765 5899999999999 55554
No 196
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.43 E-value=9.8e-07 Score=87.60 Aligned_cols=101 Identities=16% Similarity=0.086 Sum_probs=81.3
Q ss_pred CCeEEECCChHHHHHHHHHHHc---CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKER---GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFV 110 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~---g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (433)
++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+.. .-..++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~ 238 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR---------------------------------GFDETIR 238 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT---------------------------------TSCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc---------------------------------ccCHHHH
Confidence 6899999999999999999999 999999999863310 0124677
Q ss_pred HHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 111 DYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 111 ~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
..+.+.+++.+++++++++|++++.+++ +.+.+++.+| ..+.+|.||+|+| .+|+..
T Consensus 239 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~~ 295 (495)
T 2wpf_A 239 EEVTKQLTANGIEIMTNENPAKVSLNTD-GSKHVTFESG--------KTLDVDVVMMAIG--RIPRTN 295 (495)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEECTT-SCEEEEETTS--------CEEEESEEEECSC--EEECCG
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceEEEEECCC--------cEEEcCEEEECCC--Cccccc
Confidence 7888888999999999999999987653 3356777765 5899999999999 556543
No 197
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.43 E-value=4.3e-07 Score=89.91 Aligned_cols=105 Identities=14% Similarity=0.040 Sum_probs=80.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ---------------------------------GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------ccCHHHHHH
Confidence 36899999999999999999999999999999874310 012566778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+.+++.+++++++++|++++.++ +.+.+++.+. ...+ ..+.+|.||+|+| .+|+..
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~--~~~g--~~~~~D~vv~a~G--~~p~~~ 289 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEGA--NAPK--EPQRYDAVLVAAG--RAPNGK 289 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEET--TEEEEEEESS--SCCS--SCEEESCEEECCC--EEECGG
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEecc--CCCc--eEEEcCEEEECcC--CCcCCC
Confidence 8888888899999999999998765 3455666540 0001 4678999999999 666543
No 198
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.43 E-value=1.7e-06 Score=84.98 Aligned_cols=100 Identities=18% Similarity=0.190 Sum_probs=79.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . .-..++.+.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~d~~~~~~l 195 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------------------K-YFDKEMVAEV 195 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TCCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------------------c-cCCHHHHHHH
Confidence 6799999999999999999999999999999874310 0 0135677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++..+ +.+.+.+++ .++.+|.||+|+| .+|+..
T Consensus 196 ~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~---------g~i~aD~Vv~A~G--~~p~~~ 247 (452)
T 3oc4_A 196 QKSLEKQAVIFHFEETVLGIEETA--NGIVLETSE---------QEISCDSGIFALN--LHPQLA 247 (452)
T ss_dssp HHHHHTTTEEEEETCCEEEEEECS--SCEEEEESS---------CEEEESEEEECSC--CBCCCS
T ss_pred HHHHHHcCCEEEeCCEEEEEEccC--CeEEEEECC---------CEEEeCEEEECcC--CCCChH
Confidence 888889999999999999998755 344566543 3789999999999 666554
No 199
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.42 E-value=1.3e-06 Score=90.96 Aligned_cols=40 Identities=38% Similarity=0.549 Sum_probs=37.1
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIAS 70 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg 70 (433)
...+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 4568999999999999999999999999999999888877
No 200
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=1.2e-06 Score=86.58 Aligned_cols=102 Identities=14% Similarity=0.125 Sum_probs=79.8
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .-..++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~l 232 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR---------------------------------KFDECIQNTI 232 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999999863310 0125667788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+++.+++++++++|++++.+++.....+.+.+| ...+.+|.||+|+| .+|+.
T Consensus 233 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G-------~~~i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 233 TDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDS-------KSIDDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTS-------CEEEEESEEEECSC--EEECC
T ss_pred HHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCC-------cEEEEcCEEEECCC--CCCcc
Confidence 888888999999999999998764322355666653 15799999999999 55554
No 201
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.41 E-value=9.9e-07 Score=90.16 Aligned_cols=69 Identities=14% Similarity=-0.008 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHc--CCcceecceEEEEEEeCC--CCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 106 KQQFVDYLEAYAKRF--EIRPRFNETVSQAEYDAT--IRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~--~l~~~~~~~v~~v~~~~~--~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
...+...+.+.+++. +++++.++.|+++..+++ ....-+...+. ..++...+.++.||+|||.++....
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~~~~i~Ak~VVLATGG~g~~y~ 237 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANEVHIFKANAMVVACGGAVNVYR 237 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSCEEEEECSEEEECCCCBCSSSC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCcEEEEEeCEEEECCCccccccc
Confidence 456677777778777 999999999998877653 12222322210 0233567999999999997665433
No 202
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.41 E-value=1.2e-06 Score=87.71 Aligned_cols=101 Identities=16% Similarity=0.190 Sum_probs=80.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++...+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------L--IKDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T--CCSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------c--cccHHHHHHH
Confidence 789999999999999999999999999999987331 0 0135677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCe--EEEEEeecCcCCCceeE-EEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRF--WRVKTTVGGQKCGVEEM-EYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~--~~v~~~~g~~~~~~~~~-~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+++.+++++++++|++++..++... +.|++.+| . ++.+|.||+|+| .+|+.
T Consensus 262 ~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G--------~~~i~aD~Vv~A~G--~~p~~ 318 (523)
T 1mo9_A 262 LDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG--------EMRIETDFVFLGLG--EQPRS 318 (523)
T ss_dssp HHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE--------EEEEECSCEEECCC--CEECC
T ss_pred HHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCC--------cEEEEcCEEEECcC--CccCC
Confidence 8888999999999999999987543211 56777654 4 899999999999 55554
No 203
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.41 E-value=2.1e-06 Score=85.12 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=81.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~l 245 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------------------------GMDGEVAKQL 245 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------------------------SSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------------------------cCCHHHHHHH
Confidence 6799999999999999999999999999998874311 0125677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++.+++|++++..+ +.+.+.+.+. ..++...+.+|.||+|+| .+|+..
T Consensus 246 ~~~l~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~---~~g~~~~i~~D~Vi~a~G--~~p~~~ 303 (491)
T 3urh_A 246 QRMLTKQGIDFKLGAKVTGAVKSG--DGAKVTFEPV---KGGEATTLDAEVVLIATG--RKPSTD 303 (491)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEET---TSCCCEEEEESEEEECCC--CEECCT
T ss_pred HHHHHhCCCEEEECCeEEEEEEeC--CEEEEEEEec---CCCceEEEEcCEEEEeeC--CccCCC
Confidence 888889999999999999998876 4555666531 012246899999999999 656543
No 204
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.39 E-value=8.9e-07 Score=87.82 Aligned_cols=101 Identities=19% Similarity=0.293 Sum_probs=77.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .-..++.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG--------------------------------YYDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh--------------------------------HHHHHHHHH
Confidence 468999999999999999999999999999998733100 012567778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+.+++.+++++++++|++++.++ ....+.+ ++ .++.+|.||+|+| .+|+.+
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~~~--~v~~v~~-~g--------~~i~~D~Vi~a~G--~~p~~~ 294 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAGNG--KVEKIIT-DK--------NEYDVDMVILAVG--FRPNTT 294 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEECSS--SCCEEEE-SS--------CEEECSEEEECCC--EEECCG
T ss_pred HHHHHHhCCeEEEeCCEEEEEEcCC--cEEEEEE-CC--------cEEECCEEEECCC--CCcChH
Confidence 8888888999999999999998632 2222444 43 5799999999999 666544
No 205
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.39 E-value=2.1e-06 Score=84.70 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=79.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~l 221 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP---------------------------------TLDEDVTNAL 221 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc---------------------------------cCCHHHHHHH
Confidence 6899999999999999999999999999999874310 0125567788
Q ss_pred HHHH-HHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYA-KRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~-~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+ ++.+++++++++|++++.+++ .+.+.+.+. +++...+.+|.||+|+| .+|+..
T Consensus 222 ~~~l~~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~~----~g~~~~i~~D~vv~a~G--~~p~~~ 279 (468)
T 2qae_A 222 VGALAKNEKMKFMTSTKVVGGTNNGD--SVSLEVEGK----NGKRETVTCEALLVSVG--RRPFTG 279 (468)
T ss_dssp HHHHHHHTCCEEECSCEEEEEEECSS--SEEEEEECC-------EEEEEESEEEECSC--EEECCT
T ss_pred HHHHhhcCCcEEEeCCEEEEEEEcCC--eEEEEEEcC----CCceEEEECCEEEECCC--cccCCC
Confidence 8888 889999999999999987653 355655410 11135789999999999 555543
No 206
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.39 E-value=2.1e-06 Score=85.22 Aligned_cols=104 Identities=17% Similarity=0.150 Sum_probs=79.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN---------------------------------LQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT---------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------cCCHHHHHH
Confidence 36899999999999999999999999999999874311 012466777
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+.+++. ++++++++|++++..+ +.+.++..+. +++...+.+|.||+|+| .+|+..
T Consensus 221 l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~v~~~~~----~G~~~~i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 221 AEKTFNEE-FYFDAKARVISTIEKE--DAVEVIYFDK----SGQKTTESFQYVLAATG--RKANVD 277 (492)
T ss_dssp HHHHHHTT-SEEETTCEEEEEEECS--SSEEEEEECT----TCCEEEEEESEEEECSC--CEESCS
T ss_pred HHHHHhhC-cEEEECCEEEEEEEcC--CEEEEEEEeC----CCceEEEECCEEEEeeC--CccCCC
Confidence 77777776 9999999999998876 3455665421 22246899999999999 666554
No 207
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.39 E-value=1.1e-06 Score=87.05 Aligned_cols=99 Identities=24% Similarity=0.336 Sum_probs=77.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 232 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAEY 232 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHHH
Confidence 47899999999999999999999999999999763311 012567778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.++ ..+.+.+. + ..+.+|.||+|+| .+|+.
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~--~v~~v~~~-~--------~~i~~D~vi~a~G--~~p~~ 284 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGNE--RVEAVETD-K--------GTYKADLVLVSVG--VKPNT 284 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESS--BEEEEEET-T--------EEEECSEEEECSC--EEESC
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcCC--cEEEEEEC-C--------CEEEcCEEEECcC--CCcCh
Confidence 8888899999999999999998653 33334443 2 5799999999999 55543
No 208
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=4.4e-07 Score=86.53 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=75.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. -..++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG----------------------------------LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT----------------------------------CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc----------------------------------CCHHHHHHH
Confidence 5799999999999999999999999999999873310 124677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+++.+++++++++|++++ . .. +++.+| . +.+|.||+|+| .+|+.
T Consensus 190 ~~~l~~~gV~i~~~~~v~~i~--~--~~--v~~~~g--------~-i~~D~vi~a~G--~~p~~ 236 (367)
T 1xhc_A 190 KDMLEETGVKFFLNSELLEAN--E--EG--VLTNSG--------F-IEGKVKICAIG--IVPNV 236 (367)
T ss_dssp HHHHHHTTEEEECSCCEEEEC--S--SE--EEETTE--------E-EECSCEEEECC--EEECC
T ss_pred HHHHHHCCCEEEcCCEEEEEE--e--eE--EEECCC--------E-EEcCEEEECcC--CCcCH
Confidence 888899999999999999887 2 22 666654 4 99999999999 55554
No 209
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=6.1e-07 Score=88.23 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=77.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ....++..++
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 218 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP---------------------------------TYDSELTAPV 218 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999999874311 0124567778
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++. + . +.+...+ ++...+.+|.||+|+| .+|+.+
T Consensus 219 ~~~l~~~gv~i~~~~~v~~i~~-~--~-v~v~~~~------G~~~~i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 219 AESLKKLGIALHLGHSVEGYEN-G--C-LLANDGK------GGQLRLEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp HHHHHHHTCEEETTCEEEEEET-T--E-EEEECSS------SCCCEECCSCEEECCC--EEECCS
T ss_pred HHHHHHCCCEEEECCEEEEEEe-C--C-EEEEECC------CceEEEECCEEEECcC--CCcCCC
Confidence 8888888999999999999975 3 3 4444222 2235789999999999 666654
No 210
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.38 E-value=1.5e-06 Score=87.94 Aligned_cols=101 Identities=19% Similarity=0.318 Sum_probs=80.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++...+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 198 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGFA 198 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHHH
Confidence 589999999999999999999999999999986331 0 1135667788
Q ss_pred HHHHHHcCCcceecceEEEEEEeC-----------------CCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDA-----------------TIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAV 176 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~-----------------~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~ 176 (433)
.+.+++.+++++++++|++++... ..+.+++...++ ..+.+|.||+|+| .+|+
T Consensus 199 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--------~~i~~D~vi~a~G--~~p~ 268 (565)
T 3ntd_A 199 HQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG--------ELLETDLLIMAIG--VRPE 268 (565)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS--------CEEEESEEEECSC--EEEC
T ss_pred HHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC--------CEEEcCEEEECcC--Cccc
Confidence 888889999999999999998741 114566776665 5899999999999 5554
Q ss_pred c
Q 013943 177 V 177 (433)
Q Consensus 177 ~ 177 (433)
.
T Consensus 269 ~ 269 (565)
T 3ntd_A 269 T 269 (565)
T ss_dssp C
T ss_pred h
Confidence 3
No 211
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.37 E-value=1.5e-06 Score=86.30 Aligned_cols=101 Identities=20% Similarity=0.160 Sum_probs=78.2
Q ss_pred CCCeEEECCChHHHHHHHHHHH----cCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKE----RGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQ 108 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~----~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
-++|+|||||+.|+.+|..|.+ .|.+|+++++.+.+.+ . .-..+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-------------------------------~-~l~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-------------------------------K-ILPEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-------------------------------T-TSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-------------------------------c-cCCHH
Confidence 3679999999999999999987 4788999988652210 0 11246
Q ss_pred HHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 109 FVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 109 ~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+...+.+.+++.+++++++++|++++..+ +.+.+.+.+| .++.+|.||+|+| .+|+.
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~~v~l~dG--------~~i~aD~Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKLLIKLKDG--------RKVETDHIVAAVG--LEPNV 284 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeEEEEECCC--------CEEECCEEEECCC--CCccH
Confidence 67778888888999999999999998765 4456777765 6899999999999 55554
No 212
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.36 E-value=2.6e-06 Score=84.21 Aligned_cols=103 Identities=18% Similarity=0.171 Sum_probs=81.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.+
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 227 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP---------------------------------AVDEQVAKEA 227 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------------TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc---------------------------------ccCHHHHHHH
Confidence 6799999999999999999999999999999873310 0125677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.++ +.+.+.+.++ ++ ...+.+|.||+|+| .+|+..
T Consensus 228 ~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~v~~~~~----~g-~~~~~~D~vi~a~G--~~p~~~ 283 (476)
T 3lad_A 228 QKILTKQGLKILLGARVTGTEVKN--KQVTVKFVDA----EG-EKSQAFDKLIVAVG--RRPVTT 283 (476)
T ss_dssp HHHHHHTTEEEEETCEEEEEEECS--SCEEEEEESS----SE-EEEEEESEEEECSC--EEECCT
T ss_pred HHHHHhCCCEEEECCEEEEEEEcC--CEEEEEEEeC----CC-cEEEECCEEEEeeC--CcccCC
Confidence 888889999999999999998866 3455666543 22 36799999999999 555543
No 213
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.35 E-value=1.8e-06 Score=85.41 Aligned_cols=100 Identities=24% Similarity=0.256 Sum_probs=81.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++...+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------------------------------~~~~~~~~~l 238 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR---------------------------------NFDYDLRQLL 238 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999998763310 0125567778
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++..+ +.+.+.+.++ ..+.+|.||+|+| .+|+..
T Consensus 239 ~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vi~A~G--~~p~~~ 291 (484)
T 3o0h_A 239 NDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTNG--------QTICADRVMLATG--RVPNTT 291 (484)
T ss_dssp HHHHHHHTCEEESSCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCC--EEECCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEeeC--CEEEEEECCC--------cEEEcCEEEEeeC--CCcCCC
Confidence 888888899999999999998866 4467777765 6899999999999 555543
No 214
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.34 E-value=3.9e-06 Score=83.06 Aligned_cols=105 Identities=24% Similarity=0.153 Sum_probs=81.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
.+++|||+|+.|+.+|..|.+.|.+|+++++...+ +. -..++.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~~--~d~~~~~~l 233 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------------------RG--FDQQMAELV 233 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------------------TT--SCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------------------cc--cCHHHHHHH
Confidence 57999999999999999999999999999875311 00 125677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++..++ +.+.+++.++. .++...+.+|.||+|+| .+|+..
T Consensus 234 ~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~---~~~~~~~~~D~vi~a~G--~~p~~~ 292 (483)
T 3dgh_A 234 AASMEERGIPFLRKTVPLSVEKQDD-GKLLVKYKNVE---TGEESEDVYDTVLWAIG--RKGLVD 292 (483)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEETT---TCCEEEEEESEEEECSC--EEECCG
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCC-CcEEEEEecCC---CCceeEEEcCEEEECcc--cccCcC
Confidence 8888999999999999999987654 34557666541 13345899999999999 555543
No 215
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=1.7e-06 Score=85.41 Aligned_cols=105 Identities=13% Similarity=0.183 Sum_probs=80.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------------------------------~~~~~~~~~l 224 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP---------------------------------TMDAEIRKQF 224 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------------------------------cccHHHHHHH
Confidence 6899999999999999999999999999999874310 0125677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++++++|++++.++ +.+.+.+.+. .+++...+.+|.||+|+| .+|+..
T Consensus 225 ~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~---~~g~~~~~~~D~vv~a~G--~~p~~~ 282 (470)
T 1dxl_A 225 QRSLEKQGMKFKLKTKVVGVDTSG--DGVKLTVEPS---AGGEQTIIEADVVLVSAG--RTPFTS 282 (470)
T ss_dssp HHHHHHSSCCEECSEEEEEEECSS--SSEEEEEEES---SSCCCEEEEESEEECCCC--EEECCT
T ss_pred HHHHHHcCCEEEeCCEEEEEEEcC--CeEEEEEEec---CCCcceEEECCEEEECCC--CCcCCC
Confidence 888899999999999999998655 3355555420 011126799999999999 555543
No 216
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.32 E-value=5.9e-06 Score=81.87 Aligned_cols=105 Identities=16% Similarity=0.038 Sum_probs=80.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
.+|+|||+|+.|+.+|..|.+.|.+|+++++...+ + .-..++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~l 231 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------------------R--GFDQQMSSLV 231 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------c--cCCHHHHHHH
Confidence 57999999999999999999999999999886411 0 0125677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.++++++++.+++++..++ +.+.++..+. ..++...+.+|.||+|+| .+|+..
T Consensus 232 ~~~l~~~gv~~~~~~~v~~i~~~~~-~~~~v~~~~~---~~g~~~~~~~D~vi~a~G--~~p~~~ 290 (488)
T 3dgz_A 232 TEHMESHGTQFLKGCVPSHIKKLPT-NQLQVTWEDH---ASGKEDTGTFDTVLWAIG--RVPETR 290 (488)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEET---TTTEEEEEEESEEEECSC--EEESCG
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEeC---CCCeeEEEECCEEEEccc--CCcccC
Confidence 8888999999999999999987543 3455665542 013334689999999999 555543
No 217
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.32 E-value=1.1e-06 Score=85.63 Aligned_cols=104 Identities=16% Similarity=0.230 Sum_probs=70.4
Q ss_pred CCeEEEECCCCcHHHHHHHHhccC--CCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccc
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHD--AMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDT 281 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g--~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (433)
.|+|+|||+|+.|+.+|..|.+.+ .+||++.+++.+.... .+.......+.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p--------~l~~v~~g~~~------------------- 54 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--------AFPHLAMGWRK------------------- 54 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--------GHHHHHHTCSC-------------------
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCc--------cHHHHhcCCCC-------------------
Confidence 368999999999999999999875 5799999887433210 00000000000
Q ss_pred cccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC--eEEEcCCcEecccEEEEccCCCCC
Q 013943 282 ARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY--AVEFVNGRCENFDAIILATGYRSN 355 (433)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~ 355 (433)
+ ..+.....+.+++.+|+++.+ ++.++.+ .|++++|+++++|.+|+|||.++.
T Consensus 55 -------~--------------~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 55 -------F--------------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp -------G--------------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred -------H--------------HHhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 0 001112224456678998877 8888754 599999999999999999998654
No 218
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.31 E-value=3.6e-06 Score=83.23 Aligned_cols=107 Identities=17% Similarity=0.053 Sum_probs=81.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~~ 234 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR---------------------------------SFDSMISTNC 234 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999998763310 1135677788
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCcee--EEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEE--MEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~--~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++.+++|++++..++...+.+.+.+. ..++. ..+.+|.||+|+| .+|+..
T Consensus 235 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~~g~~~~~D~vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 235 TEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVP---GRLPVMTMIPDVDCLLWAIG--RVPNTK 296 (478)
T ss_dssp HHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCT---TSCCEEEEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccC---CCCcccceEEEcCEEEEeec--cccCCC
Confidence 888899999999999999998765422455666542 01112 6799999999999 555543
No 219
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.30 E-value=4.6e-07 Score=90.39 Aligned_cols=42 Identities=24% Similarity=0.426 Sum_probs=38.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCCccc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER-GIPSILLERSNCIASLWQ 73 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~~~gg~w~ 73 (433)
..+||+|||||++||+||..|++. |++|+|+|+++.+||.-+
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 358999999999999999999985 999999999999999654
No 220
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.28 E-value=5.8e-07 Score=89.54 Aligned_cols=45 Identities=27% Similarity=0.297 Sum_probs=39.8
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK 75 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~ 75 (433)
...+||+|||||++|+++|..|.+.|++|+|+|+++.+||.+...
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 55 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSV 55 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeee
Confidence 356899999999999999999999999999999999999976553
No 221
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.28 E-value=3.5e-06 Score=82.95 Aligned_cols=101 Identities=19% Similarity=0.139 Sum_probs=80.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~---------------------------------~~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS---------------------------------RFDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 36899999999999999999999999999998763310 012567788
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEE-EeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVK-TTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~-~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+.+++.+++++.+++|++++..++ +.+.|. +.+| . +.+|.||+|+| .+|+..
T Consensus 217 l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~g--------~-i~aD~Vv~a~G--~~p~~~ 271 (463)
T 4dna_A 217 LHAAMEEKGIRILCEDIIQSVSADAD-GRRVATTMKHG--------E-IVADQVMLALG--RMPNTN 271 (463)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-SCEEEEESSSC--------E-EEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-CEEEEEEcCCC--------e-EEeCEEEEeeC--cccCCC
Confidence 88888999999999999999988654 335566 6654 4 99999999999 555543
No 222
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.27 E-value=3.2e-06 Score=78.66 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=77.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999876220 12445666
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCC-ceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCG-VEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~-~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++.+++ ....+.+.+.. . ++...+.+|.||+|+| .+|+.
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~~---~~g~~~~i~~D~vv~a~G--~~p~~ 249 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGDQM-GVTGVRLRDTQ---NSDNIESLDVAGLFVAIG--HSPNT 249 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEECSS-SEEEEEEECCT---TCCCCEEEECSEEEECSC--EEESC
T ss_pred HHHhcccCCeEEEcCceeEEEEcCCC-ceEEEEEEecc---CCCceEEEEcCEEEEEeC--CCCCh
Confidence 67777778999999999999987653 22235554310 1 2246899999999999 55544
No 223
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.27 E-value=1.4e-06 Score=84.99 Aligned_cols=96 Identities=23% Similarity=0.266 Sum_probs=76.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-.+|+|||||+.|+.+|..+.+.|.+|+++++.+.+... ...++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~---------------------------------~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL---------------------------------MDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT---------------------------------SCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc---------------------------------ccchhHHH
Confidence 357999999999999999999999999999998744210 11345667
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++. .. +++.++ +.+.+|.|++|+| .+|+.
T Consensus 194 ~~~~l~~~gV~i~~~~~v~~~~~----~~--v~~~~g--------~~~~~D~vl~a~G--~~Pn~ 242 (437)
T 4eqs_A 194 ILDELDKREIPYRLNEEINAING----NE--ITFKSG--------KVEHYDMIIEGVG--THPNS 242 (437)
T ss_dssp HHHHHHHTTCCEEESCCEEEEET----TE--EEETTS--------CEEECSEEEECCC--EEESC
T ss_pred HHHHhhccceEEEeccEEEEecC----Ce--eeecCC--------eEEeeeeEEEEec--eecCc
Confidence 77888889999999999988753 22 667776 7899999999999 65654
No 224
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.24 E-value=1.2e-06 Score=84.49 Aligned_cols=46 Identities=22% Similarity=0.180 Sum_probs=41.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCCCCccccccc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER-GIPSILLERSNCIASLWQLKTY 77 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~~~gg~w~~~~~ 77 (433)
..+||+|||||++|+++|..|++. |++|+|+|+++.+||.+.....
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~ 52 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAE 52 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccc
Confidence 468999999999999999999999 9999999999999998766443
No 225
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.24 E-value=1.5e-05 Score=78.36 Aligned_cols=132 Identities=14% Similarity=0.048 Sum_probs=73.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCCCCCCcccccccCcee--eecCCceeecCCCCC-----------C
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--GIPSILLERSNCIASLWQLKTYDRLR--LHLPKQFCELPLMGF-----------P 97 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~~~gg~w~~~~~~~~~--~~~~~~~~~~~~~~~-----------~ 97 (433)
-++|+|||+|..|+.+|..|.+. +.+|+++++.+.+-.. . ...+. ...+.....+...+. .
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~--~--~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA--D--DSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC--C--CCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc--c--CCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 46899999999999999999999 8899999998743110 0 00000 000000000000000 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-----HcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCC
Q 013943 98 SEFPTYPSKQQFVDYLEAYAK-----RFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 98 ~~~~~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~ 172 (433)
..+. ..+.+.+......+.. ..+++++.+++|++++.++ +.|.+++.+. ..++..++.+|.||+|||
T Consensus 303 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~---~~g~~~~~~~D~Vv~AtG-- 374 (463)
T 3s5w_A 303 TNYS-VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDA---GSGELSVETYDAVILATG-- 374 (463)
T ss_dssp GTSS-CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEET---TTCCEEEEEESEEEECCC--
T ss_pred cCCC-cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEc---CCCCeEEEECCEEEEeeC--
Confidence 0000 0111111111111111 1478899999999998876 5677877632 123345799999999999
Q ss_pred CCCc
Q 013943 173 AEAV 176 (433)
Q Consensus 173 ~~p~ 176 (433)
.+|.
T Consensus 375 ~~p~ 378 (463)
T 3s5w_A 375 YERQ 378 (463)
T ss_dssp EECC
T ss_pred CCCC
Confidence 5454
No 226
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.22 E-value=1.9e-06 Score=83.75 Aligned_cols=48 Identities=29% Similarity=0.470 Sum_probs=42.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCCcccccccCc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG-IPSILLERSNCIASLWQLKTYDR 79 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g-~~v~iie~~~~~gg~w~~~~~~~ 79 (433)
..+||+|||||++|+++|..|++.| ++|+|+|+++.+||.+.....++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC
Confidence 4589999999999999999999999 89999999999999776644433
No 227
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.22 E-value=1e-06 Score=83.63 Aligned_cols=48 Identities=25% Similarity=0.210 Sum_probs=42.6
Q ss_pred CCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecC-CCCCCccccc
Q 013943 28 PRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERS-NCIASLWQLK 75 (433)
Q Consensus 28 ~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~-~~~gg~w~~~ 75 (433)
+++...+||+|||||++|+++|..|.+.|++|+|+|++ +.+||.|...
T Consensus 39 ~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 39 NPPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp SSCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCCCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 34456789999999999999999999999999999999 9999987653
No 228
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.21 E-value=5.3e-06 Score=82.32 Aligned_cols=99 Identities=21% Similarity=0.304 Sum_probs=72.9
Q ss_pred CCeEEECCChHHHHHHHHHHHc--------------CCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCC
Q 013943 34 PGPVIVGAGPSGLATAACLKER--------------GIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSE 99 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~--------------g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (433)
..++|||||+.|+.+|..|.+. ..+|+++|..+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4699999999999999998753 35899999987431
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCC
Q 013943 100 FPTYPSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGE 171 (433)
Q Consensus 100 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~ 171 (433)
+. -.+++.+++.+.+++.|++++++++|++++.+. ........++ ....+++.||.||+|+|.
T Consensus 268 -~~--~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~--~~~~~~~~dg----~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 268 -NM--FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ--LLAKTKHEDG----KITEETIPYGTLIWATGN 330 (502)
T ss_dssp -TT--SCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE--EEEEEECTTS----CEEEEEEECSEEEECCCE
T ss_pred -cC--CCHHHHHHHHHHHHhcceeeecCceEEEEeCCc--eEEEEEecCc----ccceeeeccCEEEEccCC
Confidence 11 136778889999999999999999999986432 1222222222 223468999999999993
No 229
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.21 E-value=1.6e-05 Score=79.34 Aligned_cols=106 Identities=18% Similarity=0.114 Sum_probs=77.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
.+|+|||+|+.|+.+|..|.+.|.+|+++++..-+ +. -..++.+.+
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l--------------------------------~~--~d~~~~~~~ 256 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL--------------------------------RG--FDQDMANKI 256 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc--------------------------------cc--CCHHHHHHH
Confidence 57999999999999999999999999999885311 00 125677888
Q ss_pred HHHHHHcCCcceecceEEEEEEeCC--CCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDAT--IRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~--~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++.+++++.++...+ .+.+.++.... .+.+...+.+|.||+|+| .+|+..
T Consensus 257 ~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~---~g~~~~~~~~D~vi~a~G--~~p~~~ 318 (519)
T 3qfa_A 257 GEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQST---NSEEIIEGEYNTVMLAIG--RDACTR 318 (519)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEES---SSSCEEEEEESEEEECSC--EEESCS
T ss_pred HHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEEC---CCcEEEEEECCEEEEecC--CcccCC
Confidence 8888999999999988888876432 13344544321 012235788999999999 666544
No 230
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.20 E-value=1.3e-06 Score=85.62 Aligned_cols=44 Identities=9% Similarity=0.101 Sum_probs=40.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK 75 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~ 75 (433)
..+||+|||||++|+++|..|++.|++|+++|+++.+||.+...
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~ 53 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASV 53 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccce
Confidence 45899999999999999999999999999999999999987663
No 231
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.19 E-value=3.4e-06 Score=85.70 Aligned_cols=98 Identities=22% Similarity=0.379 Sum_probs=78.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP---------------------------------PIDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc---------------------------------cCCHHHHHH
Confidence 36799999999999999999999999999998763310 023566778
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|++++... .. +.+.++ ..+.+|.||+|+| .+|+.
T Consensus 234 l~~~l~~~GV~i~~~~~v~~i~~~~--~~--v~~~~g--------~~i~~D~Vi~a~G--~~p~~ 284 (588)
T 3ics_A 234 VHEHMKNHDVELVFEDGVDALEENG--AV--VRLKSG--------SVIQTDMLILAIG--VQPES 284 (588)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEGGG--TE--EEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCCEEEECCeEEEEecCC--CE--EEECCC--------CEEEcCEEEEccC--CCCCh
Confidence 8888889999999999999997654 33 666665 6899999999999 55544
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.19 E-value=3.9e-06 Score=78.62 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=76.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ...+..+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 3689999999999999999999999999999876321 11345566
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+++++++++|.+++.++ ....+++.+. .+++...+.+|.||+|+| .+|..
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~~--~~~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGDE--RVRWAVVFHN---QTQEELALEVDAVLILAG--YITKL 254 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEESS--SEEEEEEEET---TTCCEEEEECSEEEECCC--EEEEC
T ss_pred HHhccccCCeEEecCCcceeEccCC--CeeEEEEEEC---CCCceEEEecCEEEEeec--CCCCc
Confidence 7777777899999999999998743 3223555420 012236799999999999 55544
No 233
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.19 E-value=1.6e-06 Score=82.89 Aligned_cols=45 Identities=24% Similarity=0.147 Sum_probs=41.4
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK 75 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~ 75 (433)
...+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 356899999999999999999999999999999999999988754
No 234
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.18 E-value=4.3e-06 Score=80.12 Aligned_cols=107 Identities=13% Similarity=0.176 Sum_probs=71.6
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccc
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTAR 283 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 283 (433)
..+|+|||+|+.|+.+|..|...+.+|+++.+.+.....+ . .+...+....+.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~--~-----~l~~~l~g~~~~-------------------- 61 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR--P-----RLNEIIAKNKSI-------------------- 61 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG--G-----GHHHHHHSCCCG--------------------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc--C-----hhhHHHcCCCCH--------------------
Confidence 4589999999999999999977788999998887321100 0 111111110000
Q ss_pred cCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC--eEEEcCCcEecccEEEEccCCCCCCC
Q 013943 284 FGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY--AVEFVNGRCENFDAIILATGYRSNVP 357 (433)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 357 (433)
..+.....+.+++.+|+++.+ +..++.+ .+.+.+|+++.+|.+|+|||..|..+
T Consensus 62 --------------------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 62 --------------------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp --------------------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred --------------------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCC
Confidence 011112234455678888876 7888754 58889999999999999999887753
No 235
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.16 E-value=5.9e-06 Score=78.50 Aligned_cols=107 Identities=18% Similarity=0.147 Sum_probs=74.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.... + .+.......+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~-----------------------~---d~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD-----------------------A---DPSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC-----------------------C---CCCccCCHHHHHH
Confidence 3589999999999999999999999999999876331000 0 0001122455667
Q ss_pred HHHHHHHcC-CcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEE-EeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFE-IRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEY-RCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~-l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~-~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++.+ ++++.+++|++++.++ +.+.+++.+| ..+ .+|.||+|+| ..|..
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNN--GQYHISFDSG--------QSVHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEET--TEEEEEESSS--------CCEEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecC--CceEEEecCC--------eEeccCCceEEeec--cCCcc
Confidence 777777776 9999999999997655 4556777765 334 4699999999 55655
No 236
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.15 E-value=3.3e-06 Score=74.93 Aligned_cols=175 Identities=19% Similarity=0.215 Sum_probs=98.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhcccccc
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARF 284 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 284 (433)
.+|+|||+|++|+++|..|++.|.+|+++.+.....- ... .+. +..+-.....+.+ . + .
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G--~~~-~~~------~~~~~~~~~~~~~--------~-d--~- 62 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM--MPF-LPP------KPPFPPGSLLERA--------Y-D--P- 62 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT--CCS-SCC------CSCCCTTCHHHHH--------C-C--T-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC--ccc-Ccc------ccccchhhHHhhh--------c-c--C-
Confidence 4799999999999999999999999999998742110 000 000 0000000000000 0 0 0
Q ss_pred CCCCCCCCcccccccCCCccccCchhhhhhhcC-CeEEecC-ceEEe--CC---eEEEcCCcEecccEEEEccCCCCCCC
Q 013943 285 GLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSG-HIRVFPG-IKRLK--RY---AVEFVNGRCENFDAIILATGYRSNVP 357 (433)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~~~~~~ 357 (433)
.++ .+..+...+.+.+++. +++++.. +.++. ++ ++.+.+|+++++|.||+|+|..++..
T Consensus 63 ------~g~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 63 ------KDE--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp ------TCC--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred ------CCC--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 000 0112333344555554 7887754 66654 22 36677888899999999999966542
Q ss_pred Ccc-------------------c---cccccccC--------CCCcC--CCC-----------CCCCCCCCceEEeeecc
Q 013943 358 SWL-------------------K---ESEMFSRK--------DGLPR--RPF-----------PNGWKGESGLYSVGFTK 394 (433)
Q Consensus 358 ~~~-------------------~---~~~l~~~~--------~g~~~--~~~-----------~~~~~~~~~iya~Gd~~ 394 (433)
.++ + +.++..+. .|.+. +++ ....++.|+||++|||+
T Consensus 129 ~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a 208 (232)
T 2cul_A 129 LFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV 208 (232)
T ss_dssp EEETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT
T ss_pred eecCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc
Confidence 110 0 11111100 01100 000 01225889999999999
Q ss_pred cc---cccchhhHHHHHHHHHhhh
Q 013943 395 RG---LLGVAMDAKRIAQDIESCW 415 (433)
Q Consensus 395 ~~---~~~a~~~g~~~a~~i~~~l 415 (433)
. ...+..+|+.+|++|.+.|
T Consensus 209 -~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 209 -REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp -SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred -cCccHHHHHHHHHHHHHHHHhhc
Confidence 4 2257899999999998876
No 237
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.15 E-value=1.4e-06 Score=87.10 Aligned_cols=42 Identities=29% Similarity=0.457 Sum_probs=38.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCCcccc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG-IPSILLERSNCIASLWQL 74 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g-~~v~iie~~~~~gg~w~~ 74 (433)
.+||+|||||++||+||..|.+.| ++|+|+|+++.+||....
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 479999999999999999999999 999999999999996543
No 238
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.14 E-value=2.5e-06 Score=85.26 Aligned_cols=41 Identities=29% Similarity=0.427 Sum_probs=38.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLW 72 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w 72 (433)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 45899999999999999999999999999999999998854
No 239
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.14 E-value=3.6e-06 Score=81.15 Aligned_cols=105 Identities=15% Similarity=0.082 Sum_probs=69.9
Q ss_pred CCCeEEEECCCCcHHHHHHHHhccC--CCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhcc
Q 013943 203 RGKRVLVVGCGNSGMEVCLDLCNHD--AMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGD 280 (433)
Q Consensus 203 ~~~~v~VvG~G~~a~e~a~~l~~~g--~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 280 (433)
++|+|+|||+|+.|+.+|..|.+.+ .+|+++.+++.+.... .....+....+.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p--------~~~~v~~g~~~~----------------- 55 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY--------MSNEVIGGDREL----------------- 55 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST--------THHHHHHTSSCG-----------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc--------CHHHHhcCCCCH-----------------
Confidence 4799999999999999999998876 4799998877432110 000000000000
Q ss_pred ccccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC--eEEEcCCcEecccEEEEccCCCCCC
Q 013943 281 TARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY--AVEFVNGRCENFDAIILATGYRSNV 356 (433)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~ 356 (433)
.....-.+.+.+.+|+++.+ +..++.+ .+.+.+|+++++|.+|+|||.+++.
T Consensus 56 ------------------------~~~~~~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 56 ------------------------ASLRVGYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLY 110 (401)
T ss_dssp ------------------------GGGEECSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECG
T ss_pred ------------------------HHHhhCHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCcccc
Confidence 00000113344568888777 8888754 5888999999999999999998875
No 240
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.14 E-value=5.4e-06 Score=80.91 Aligned_cols=104 Identities=13% Similarity=0.248 Sum_probs=71.3
Q ss_pred CeEEEECCCCcHHHHHHHHhc---cCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccc
Q 013943 205 KRVLVVGCGNSGMEVCLDLCN---HDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDT 281 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~---~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (433)
++|+|||+|+.|+.+|..|++ .+.+|+++.+++...... ............
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~--------~~~~~~~g~~~~------------------ 58 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP--------SNPWVGVGWKER------------------ 58 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG--------GHHHHHHTSSCH------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC--------CccccccCccCH------------------
Confidence 689999999999999999999 788999999888322110 000000000000
Q ss_pred cccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC--eEEEcCCcEecccEEEEccCCCCCC
Q 013943 282 ARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY--AVEFVNGRCENFDAIILATGYRSNV 356 (433)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~ 356 (433)
..+...+.+.+++.+|+++.. +..++.+ .+.+.+++++.+|.||+|||..|+.
T Consensus 59 ----------------------~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 59 ----------------------DDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp ----------------------HHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECG
T ss_pred ----------------------HHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCc
Confidence 011122334555678888766 7777754 5888899999999999999998875
No 241
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.13 E-value=5.5e-06 Score=81.16 Aligned_cols=99 Identities=23% Similarity=0.348 Sum_probs=75.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR--------------------------------SFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh--------------------------------hcCHHHHHH
Confidence 368999999999999999999999999999998743110 012566777
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+++. +++++++.|++++..+ . +.....++ .++.+|.||+|+| .+|+.
T Consensus 196 l~~~l~~~-v~i~~~~~v~~i~~~~--~-v~~v~~~g--------~~i~~D~Vv~a~G--~~p~~ 246 (449)
T 3kd9_A 196 LEEKLKKH-VNLRLQEITMKIEGEE--R-VEKVVTDA--------GEYKAELVILATG--IKPNI 246 (449)
T ss_dssp HHHHHTTT-SEEEESCCEEEEECSS--S-CCEEEETT--------EEEECSEEEECSC--EEECC
T ss_pred HHHHHHhC-cEEEeCCeEEEEeccC--c-EEEEEeCC--------CEEECCEEEEeeC--CccCH
Confidence 77777777 9999999999987654 2 22223343 6899999999999 55543
No 242
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=7.5e-06 Score=77.62 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=74.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ...++.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 3689999999999999999999999999999876321 01234455
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+..++.+++++++++|++++.+++ ....|.+... +++...+.+|.||+|+| ..|..
T Consensus 208 l~~~~~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~----~g~~~~i~~D~vi~a~G--~~p~~ 265 (360)
T 3ab1_A 208 VERARANGTIDVYLETEVASIEESNG-VLTRVHLRSS----DGSKWTVEADRLLILIG--FKSNL 265 (360)
T ss_dssp SHHHHHHTSEEEESSEEEEEEEEETT-EEEEEEEEET----TCCEEEEECSEEEECCC--BCCSC
T ss_pred HHHHhhcCceEEEcCcCHHHhccCCC-ceEEEEEEec----CCCeEEEeCCEEEECCC--CCCCH
Confidence 66667778899999999999987642 2223444311 22246799999999999 54543
No 243
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.10 E-value=2.9e-06 Score=84.34 Aligned_cols=43 Identities=33% Similarity=0.295 Sum_probs=39.2
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccc
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQ 73 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~ 73 (433)
...+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 3568999999999999999999999999999999999998653
No 244
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.06 E-value=1.4e-05 Score=78.69 Aligned_cols=103 Identities=23% Similarity=0.296 Sum_probs=74.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~d~~~~~~l 220 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI-------------------------------T-LEDQDIVNTL 220 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T-SCCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC-------------------------------C-CCCHHHHHHH
Confidence 6799999999999999999999999999999763310 0 0024455555
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.++ ++++.+++|++++..++ +.+.+.+.+. +++...+.+|.||+|+| .+|+..
T Consensus 221 ~~~l~---v~i~~~~~v~~i~~~~~-~~v~v~~~~~----~G~~~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 221 LSILK---LNIKFNSPVTEVKKIKD-DEYEVIYSTK----DGSKKSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHC---CCEECSCCEEEEEEEET-TEEEEEECCT----TSCCEEEEESCEEECCC--EEECCC
T ss_pred HhcCE---EEEEECCEEEEEEEcCC-CcEEEEEEec----CCceEEEEcCEEEECcC--CCcccc
Confidence 55443 88999999999987652 3445666520 12235899999999999 555544
No 245
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.06 E-value=4e-06 Score=82.78 Aligned_cols=42 Identities=36% Similarity=0.445 Sum_probs=37.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL 74 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~ 74 (433)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||....
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 479999999999999999999999999999999999985443
No 246
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.06 E-value=7.7e-06 Score=79.05 Aligned_cols=104 Identities=15% Similarity=0.249 Sum_probs=69.8
Q ss_pred CeEEEECCCCcHHHHHHHHhc---cCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccc
Q 013943 205 KRVLVVGCGNSGMEVCLDLCN---HDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDT 281 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~---~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 281 (433)
++|+|||+|..|+.+|..|++ .+.+|+++.+++...... .. +..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~-~~--~~~------------------------------ 48 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRP-AL--PHV------------------------------ 48 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECC-SS--CCC------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceecc-ch--hhc------------------------------
Confidence 589999999999999999999 789999999988322110 00 000
Q ss_pred cccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC--eEEEcCCcE----ecccEEEEccCCCC
Q 013943 282 ARFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY--AVEFVNGRC----ENFDAIILATGYRS 354 (433)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~----~~~D~vi~atG~~~ 354 (433)
..+. .....+...+.+.+.+.+++++.+ +..++.+ .+.+.+++. +++|.||+|||..|
T Consensus 49 -~~~~--------------~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 49 -AIGV--------------RDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp -CSSC--------------CCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred -ccCC--------------cCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCc
Confidence 0000 001112233345555667888777 7777654 577877764 89999999999988
Q ss_pred CC
Q 013943 355 NV 356 (433)
Q Consensus 355 ~~ 356 (433)
+.
T Consensus 114 ~~ 115 (409)
T 3h8l_A 114 AT 115 (409)
T ss_dssp CG
T ss_pred Cc
Confidence 75
No 247
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.05 E-value=6.2e-06 Score=81.56 Aligned_cols=52 Identities=31% Similarity=0.362 Sum_probs=44.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCCCCCccccc-ccCceeee
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG-IPSILLERSNCIASLWQLK-TYDRLRLH 83 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g-~~v~iie~~~~~gg~w~~~-~~~~~~~~ 83 (433)
..+||+|||||++|+++|..|.+.| .+|+|+|+++.+||.|... .+.+...+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~ 61 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWD 61 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEe
Confidence 3589999999999999999999998 7999999999999988762 44444443
No 248
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.05 E-value=4.6e-05 Score=77.46 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=73.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
.+|+|||||+.|+.+|..|.+.|.+|+++++.. +. +. ...++.+++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~--~d~~~~~~~ 332 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL-------------------------------RG--FDQQMAEKV 332 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TT--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc-------------------------------Cc--CCHHHHHHH
Confidence 589999999999999999999999999999862 10 00 124566777
Q ss_pred HHHHHHcCCcceecceEEEEEEe-----CC--CCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYD-----AT--IRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~-----~~--~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+++.++++++++.++.+... .+ .+.+.+..... +++...+.+|.||+|+| .+|+.
T Consensus 333 ~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~----~g~~~~~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 333 GDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT----DGKKFEEEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEET----TSCEEEEEESEEEECSC--EEECG
T ss_pred HHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeC----CCcEEeccCCEEEEEeC--Ccccc
Confidence 88888889999999888888653 11 13344443211 12234456999999999 55554
No 249
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.04 E-value=4e-06 Score=82.18 Aligned_cols=41 Identities=34% Similarity=0.523 Sum_probs=38.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQ 73 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~ 73 (433)
.+||+|||||++|+++|..|++.|++|+|+|+++.+||...
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 47999999999999999999999999999999999988654
No 250
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.04 E-value=4.1e-06 Score=82.64 Aligned_cols=42 Identities=29% Similarity=0.268 Sum_probs=38.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC--CCEEEEecCCCCCCcccc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG--IPSILLERSNCIASLWQL 74 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~~~gg~w~~ 74 (433)
++||+|||||++|+++|..|.+.| ++|+|+|+++.+||....
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 589999999999999999999999 999999999988885443
No 251
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.03 E-value=1.6e-05 Score=74.44 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=72.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. . ...
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~----~~~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------A----STI 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------S----CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------C----CHH
Confidence 4679999999999999999999999999999876321 0 122
Q ss_pred HHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+.+ .+++++.+++|++++.+++ ....|++.+. ..++...+.+|.||+|+| ..|..
T Consensus 214 ~~~~l~~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~ 273 (338)
T 3itj_A 214 MQKRAEKNEKIEILYNTVALEAKGDGK-LLNALRIKNT---KKNEETDLPVSGLFYAIG--HTPAT 273 (338)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEEESSS-SEEEEEEEET---TTTEEEEEECSEEEECSC--EEECC
T ss_pred HHHHHHhcCCeEEeecceeEEEEcccC-cEEEEEEEEC---CCCceEEEEeCEEEEEeC--CCCCh
Confidence 3333444 4899999999999988663 2333555541 022236899999999999 54543
No 252
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.03 E-value=4.3e-06 Score=82.98 Aligned_cols=40 Identities=25% Similarity=0.354 Sum_probs=37.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccc
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQ 73 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~ 73 (433)
+||+|||||++|+++|..|.+.|++|+|+|+++.+||...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 7999999999999999999999999999999999988543
No 253
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.00 E-value=1.7e-05 Score=77.27 Aligned_cols=105 Identities=17% Similarity=0.253 Sum_probs=70.9
Q ss_pred CeEEEECCCCcHHHHHHHHhc--cCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhcccc
Q 013943 205 KRVLVVGCGNSGMEVCLDLCN--HDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTA 282 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~--~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 282 (433)
++|+|||+|..|+.+|..|++ .+.+|+++.+++...... ...........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~--------~~~~~~~g~~~-------------------- 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--------AFPHLAMGWRK-------------------- 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--------GHHHHHHTCSC--------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC--------CcchhccCccC--------------------
Confidence 589999999999999999999 678999999887322110 00000000000
Q ss_pred ccCCCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecC-ceEEeCC--eEEEcCCcEecccEEEEccCCCCCCC
Q 013943 283 RFGLDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPG-IKRLKRY--AVEFVNGRCENFDAIILATGYRSNVP 357 (433)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 357 (433)
...+...+.+.+++.+++++.. +..++.+ .+.+.+++++.+|.+|+|||..++.+
T Consensus 55 --------------------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 --------------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp --------------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred --------------------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 0011222234455568888776 7777754 58888898999999999999998764
No 254
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.00 E-value=5.2e-06 Score=79.49 Aligned_cols=45 Identities=24% Similarity=0.233 Sum_probs=40.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccccc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTY 77 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~ 77 (433)
.+||+|||||++|+++|..|.+.|++|+|+|+++.+||.|.....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~ 47 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARD 47 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccc
Confidence 368999999999999999999999999999999999998876544
No 255
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.00 E-value=4.8e-06 Score=79.24 Aligned_cols=47 Identities=23% Similarity=0.256 Sum_probs=40.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDR 79 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~ 79 (433)
++||+|||||++|+++|..|.+.|++|+|+|+++.+||........+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g 47 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG 47 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC
Confidence 36899999999999999999999999999999999999765533333
No 256
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.98 E-value=1.4e-05 Score=73.26 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|+.|+.+|..|++.|.+|+++.+.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999765
No 257
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.97 E-value=8.9e-06 Score=80.20 Aligned_cols=47 Identities=32% Similarity=0.522 Sum_probs=40.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCcccccccC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI-PSILLERSNCIASLWQLKTYD 78 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~~~gg~w~~~~~~ 78 (433)
..+||+|||||++|+++|..|.+.|+ +|+|+|+++.+||.+....+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~ 50 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFA 50 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEET
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccC
Confidence 45899999999999999999999998 899999999999977654333
No 258
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.96 E-value=6.1e-06 Score=81.78 Aligned_cols=41 Identities=27% Similarity=0.368 Sum_probs=38.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLW 72 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w 72 (433)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 45799999999999999999999999999999999999864
No 259
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.95 E-value=3e-05 Score=71.94 Aligned_cols=100 Identities=18% Similarity=0.165 Sum_probs=72.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-----------------------------------AQP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-----------------------------------cCH---HH
Confidence 3789999999999999999999999999999876331 011 22
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.++.++.+++++++++|++++.++ ....+++.+. ..++...+.+|.||+|+| ..|..
T Consensus 196 ~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~---~~g~~~~~~~D~vv~a~G--~~p~~ 253 (323)
T 3f8d_A 196 VETVKKKPNVEFVLNSVVKEIKGDK--VVKQVVVENL---KTGEIKELNVNGVFIEIG--FDPPT 253 (323)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEET---TTCCEEEEECSEEEECCC--EECCH
T ss_pred HHHHHhCCCcEEEeCCEEEEEeccC--ceeEEEEEEC---CCCceEEEEcCEEEEEEC--CCCCh
Confidence 3334444589999999999998764 4444666541 012235899999999999 55553
No 260
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.95 E-value=2.2e-05 Score=73.17 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=69.2
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..+ .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~---~ 194 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-KVA---Q 194 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-HHH---H
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-hHH---H
Confidence 689999999999999999999999999999876321 00 112 2
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.++.++.+++++++++|+++..++ ....|.+.+. .+++...+.+|.||+|+| .+|+.
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~~--~v~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~ 251 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGAD--SVSGVKLRNL---KTGEVSELATDGVFIFIG--HVPNT 251 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEET---TTCCEEEEECSEEEECSC--EEESC
T ss_pred HHHHhcCCceEecCCceEEEccCC--cEEEEEEEEC---CCCcEEEEEcCEEEEccC--CCCCh
Confidence 222233588999999999998753 3223555420 012235789999999999 55554
No 261
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.93 E-value=4.9e-05 Score=70.18 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=70.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC----------------------------------cc-----HH
Confidence 3689999999999999999999999999999876320 00 12
Q ss_pred HHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+.+ .++++++++++++++.+++ ....+.+.++ ..++...+.+|.||+|+| ..|+.
T Consensus 185 ~~~~l~~~~gv~v~~~~~v~~i~~~~~-~v~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~ 244 (310)
T 1fl2_A 185 LQDKLRSLKNVDIILNAQTTEVKGDGS-KVVGLEYRDR---VSGDIHNIELAGIFVQIG--LLPNT 244 (310)
T ss_dssp HHHHHHTCTTEEEESSEEEEEEEESSS-SEEEEEEEET---TTCCEEEEECSEEEECSC--EEESC
T ss_pred HHHHHhhCCCeEEecCCceEEEEcCCC-cEEEEEEEEC---CCCcEEEEEcCEEEEeeC--CccCc
Confidence 3333444 5889999999999987542 2223555441 023346899999999999 55543
No 262
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.93 E-value=2.7e-05 Score=72.06 Aligned_cols=102 Identities=14% Similarity=0.068 Sum_probs=70.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. ....+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~-- 185 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPITL-- 185 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHHH--
Confidence 3789999999999999999999999999998876321 001122
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
..+.++.++++++++++++++.+++ ....+.+.+. .+++...+.+|.||+|+| ..|+.+
T Consensus 186 -~~l~~~~gv~v~~~~~v~~i~~~~~-~v~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~~ 244 (311)
T 2q0l_A 186 -EHAKNNDKIEFLTPYVVEEIKGDAS-GVSSLSIKNT---ATNEKRELVVPGFFIFVG--YDVNNA 244 (311)
T ss_dssp -HHHHTCTTEEEETTEEEEEEEEETT-EEEEEEEEET---TTCCEEEEECSEEEECSC--EEECCG
T ss_pred -HHHhhCCCeEEEeCCEEEEEECCCC-cEeEEEEEec---CCCceEEEecCEEEEEec--CccChh
Confidence 2222235889999999999987642 2223444420 012235799999999999 555543
No 263
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.91 E-value=3.4e-05 Score=71.28 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=72.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... ..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AAP---ST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SCH---HH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CCH---HH
Confidence 3689999999999999999999999999998876320 011 23
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
+.+..++.+++++++++|.+++.+++ ....+++... +++...+.+|.||+|+| ..|...
T Consensus 189 ~~~~~~~~gv~~~~~~~v~~i~~~~~-~~~~v~~~~~----~g~~~~~~~D~vv~a~G--~~p~~~ 247 (315)
T 3r9u_A 189 VEKVKKNEKIELITSASVDEVYGDKM-GVAGVKVKLK----DGSIRDLNVPGIFTFVG--LNVRNE 247 (315)
T ss_dssp HHHHHHCTTEEEECSCEEEEEEEETT-EEEEEEEECT----TSCEEEECCSCEEECSC--EEECCG
T ss_pred HHHHHhcCCeEEEeCcEEEEEEcCCC-cEEEEEEEcC----CCCeEEeecCeEEEEEc--CCCCch
Confidence 34444567899999999999987653 2222444311 22345899999999999 555443
No 264
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.90 E-value=1.2e-05 Score=78.39 Aligned_cols=44 Identities=9% Similarity=0.095 Sum_probs=40.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK 75 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~ 75 (433)
..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+...
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 45899999999999999999999999999999999999987653
No 265
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.90 E-value=5.5e-05 Score=70.23 Aligned_cols=100 Identities=18% Similarity=0.080 Sum_probs=70.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~---- 195 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENA---- 195 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHH----
Confidence 3689999999999999999999999999998875220 0122
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+.+.+++++++++|+++..++. ....+.+.+. .+++...+.+|.||+|+| ..|+.
T Consensus 196 l~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~ 254 (319)
T 3cty_A 196 YVQEIKKRNIPYIMNAQVTEIVGDGK-KVTGVKYKDR---TTGEEKLIETDGVFIYVG--LIPQT 254 (319)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEESSS-SEEEEEEEET---TTCCEEEECCSEEEECCC--EEECC
T ss_pred HHHHHhcCCcEEEcCCeEEEEecCCc-eEEEEEEEEc---CCCceEEEecCEEEEeeC--CccCh
Confidence 23344467999999999999987642 1223444420 012235799999999999 55543
No 266
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.88 E-value=2.1e-05 Score=73.73 Aligned_cols=101 Identities=19% Similarity=0.161 Sum_probs=69.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. . .+.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~-~~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------A-SKIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------S-CTTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------c-cHHHH--
Confidence 4789999999999999999999999999999876321 0 00111
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.++.++.+++++++++|++++.++.... +.+.+. .+++...+.+|.||+|+| .+|+.+
T Consensus 198 -~~~~~~~gV~v~~~~~v~~i~~~~~~~~--v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~~ 255 (335)
T 2a87_A 198 -DRARNNDKIRFLTNHTVVAVDGDTTVTG--LRVRDT---NTGAETTLPVTGVFVAIG--HEPRSG 255 (335)
T ss_dssp -HHHHHCTTEEEECSEEEEEEECSSSCCE--EEEEEE---TTSCCEEECCSCEEECSC--EEECCT
T ss_pred -HHHhccCCcEEEeCceeEEEecCCcEeE--EEEEEc---CCCceEEeecCEEEEccC--CccChh
Confidence 1333456899999999999986542222 333321 012236799999999999 555543
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.88 E-value=3e-05 Score=72.48 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=71.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---
Confidence 4689999999999999999999999999999876320 01111
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeE-EEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFW-RVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~-~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
..++.++.+++++++++|++++.+++...+ .+.+.+. .+++..++.+|.||+|+| .+|+.+
T Consensus 201 ~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~p~~~ 262 (333)
T 1vdc_A 201 QQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---VTGDVSDLKVSGLFFAIG--HEPATK 262 (333)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---TTCCEEEEECSEEEECSC--EEESCG
T ss_pred HHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec---CCCceEEEecCEEEEEeC--CccchH
Confidence 123344568899999999999876521022 2444421 012246899999999999 555543
No 268
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.84 E-value=7.9e-06 Score=79.55 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=32.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+++||+|||||++|+++|..|++.|++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34899999999999999999999999999999976
No 269
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.82 E-value=1.4e-05 Score=75.74 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=32.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+||+|||||++|+++|+.|++.|++|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 45899999999999999999999999999999975
No 270
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.82 E-value=5.2e-05 Score=70.63 Aligned_cols=100 Identities=11% Similarity=-0.002 Sum_probs=72.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ..+..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHH---
Confidence 4689999999999999999999999999998876321 01111
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
.+.+++.+++++.+++|++++.++. ...+++.++ ..++...+.+|.||+|+| ..|..+
T Consensus 196 -~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~~---~~g~~~~~~~D~vv~a~G--~~p~~~ 253 (332)
T 3lzw_A 196 -VENLHASKVNVLTPFVPAELIGEDK--IEQLVLEEV---KGDRKEILEIDDLIVNYG--FVSSLG 253 (332)
T ss_dssp -HHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEET---TSCCEEEEECSEEEECCC--EECCCG
T ss_pred -HHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEec---CCCceEEEECCEEEEeec--cCCCch
Confidence 2235677999999999999987653 334555542 022346899999999999 555443
No 271
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.80 E-value=1.4e-05 Score=78.11 Aligned_cols=44 Identities=16% Similarity=0.125 Sum_probs=40.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCccccc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLK 75 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~ 75 (433)
..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+...
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~ 62 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASL 62 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcccc
Confidence 46899999999999999999999999999999999999876553
No 272
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.75 E-value=3e-05 Score=72.95 Aligned_cols=36 Identities=31% Similarity=0.335 Sum_probs=33.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI 68 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~ 68 (433)
|+||+|||||++|+.+|..|++.|.+|+++|++...
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 689999999999999999999999999999998743
No 273
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.73 E-value=2.3e-05 Score=80.98 Aligned_cols=100 Identities=15% Similarity=0.082 Sum_probs=71.9
Q ss_pred CCeEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVG--AGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIG--aG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
++|+||| +|+.|+.+|..|.+.|.+|+++++.+.+.... .......
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~~ 571 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEVN 571 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCHH
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhHH
Confidence 5699999 99999999999999999999999887442110 0011245
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCc
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAV 176 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~ 176 (433)
.+.+.+++.+++++.+++|++++.++ ..+.... .++..++.+|.||+|+| .+|+
T Consensus 572 ~l~~~l~~~GV~i~~~~~V~~i~~~~----~~v~~~~-----~~~~~~i~aD~VV~A~G--~~p~ 625 (690)
T 3k30_A 572 RIQRRLIENGVARVTDHAVVAVGAGG----VTVRDTY-----ASIERELECDAVVMVTA--RLPR 625 (690)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEETTE----EEEEETT-----TCCEEEEECSEEEEESC--EEEC
T ss_pred HHHHHHHHCCCEEEcCcEEEEEECCe----EEEEEcc-----CCeEEEEECCEEEECCC--CCCC
Confidence 56667778899999999999987432 2233211 11136899999999999 5554
No 274
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.73 E-value=3.2e-05 Score=72.77 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|..|+.+|..|++.|.+|+++.+.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 379999999999999999999999999998886
No 275
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.72 E-value=7.2e-05 Score=69.02 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=29.8
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 69999999999999999999999999998764
No 276
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.67 E-value=4.6e-05 Score=78.31 Aligned_cols=44 Identities=30% Similarity=0.352 Sum_probs=39.8
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL 74 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~ 74 (433)
...+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 45689999999999999999999999999999999999986543
No 277
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.65 E-value=5.4e-05 Score=79.34 Aligned_cols=44 Identities=30% Similarity=0.352 Sum_probs=39.7
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccc
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQL 74 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~ 74 (433)
...++|+|||||++|+++|..|.+.|++|+|+|+...+||.+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 45689999999999999999999999999999999999986543
No 278
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.63 E-value=0.00021 Score=71.16 Aligned_cols=100 Identities=14% Similarity=0.092 Sum_probs=71.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .. ..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 3689999999999999999999999999998876321 00 22
Q ss_pred HHHHHHH-cCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 113 LEAYAKR-FEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 113 l~~~~~~-~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+.+.+.+ .++++++++.++++..+++ ....+.+.+. ..++...+.+|.||+|+| ..|+.
T Consensus 396 l~~~l~~~~gV~v~~~~~v~~i~~~~~-~v~~v~~~~~---~~g~~~~i~~D~vi~a~G--~~pn~ 455 (521)
T 1hyu_A 396 LQDKVRSLKNVDIILNAQTTEVKGDGS-KVVGLEYRDR---VSGDIHSVALAGIFVQIG--LLPNT 455 (521)
T ss_dssp HHHHHTTCTTEEEECSEEEEEEEECSS-SEEEEEEEET---TTCCEEEEECSEEEECCC--EEESC
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEcCCC-cEEEEEEEeC---CCCceEEEEcCEEEECcC--CCCCc
Confidence 3344444 4888999999999987542 2223555431 023346899999999999 55543
No 279
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.61 E-value=8.1e-05 Score=71.92 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=31.3
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999999887
No 280
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.57 E-value=4.5e-05 Score=77.64 Aligned_cols=41 Identities=27% Similarity=0.276 Sum_probs=36.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcc
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLW 72 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w 72 (433)
..+||+|||||++|+++|..|++.|++|+|+|+....+|.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35899999999999999999999999999999998877644
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.57 E-value=9.9e-05 Score=72.17 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=65.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
-++|+|||||..|+-+|..+.+.|. +|+++++.+.. .++. ...+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~------------------------------~~p~--~~~e--- 308 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK------------------------------NMPG--SQRE--- 308 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST------------------------------TCSS--CHHH---
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc------------------------------CCCC--CHHH---
Confidence 4789999999999999999999998 49999887622 0111 1111
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEE---E----eecCcC---CCceeEEEEeCEEEEccCCCCCCc
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVK---T----TVGGQK---CGVEEMEYRCRWLVVATGENAEAV 176 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~---~----~~g~~~---~~~~~~~~~~d~viiAtG~~~~p~ 176 (433)
.+.+.+.++++++++.++++..++....+++. + .+|... ..++..++.+|.||+|+| ..|.
T Consensus 309 --~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G--~~p~ 379 (456)
T 2vdc_G 309 --VAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALG--FEPE 379 (456)
T ss_dssp --HHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSC--EECC
T ss_pred --HHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCC--CCCC
Confidence 23455678999888887777543210011111 1 111000 012346899999999999 4443
No 282
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.54 E-value=3.6e-05 Score=72.58 Aligned_cols=33 Identities=33% Similarity=0.480 Sum_probs=31.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcC------CCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERG------IPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g------~~v~iie~~~ 66 (433)
.||+|||||++|+++|+.|++.| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 38999999999999999999998 8999999986
No 283
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.53 E-value=0.00025 Score=65.60 Aligned_cols=32 Identities=22% Similarity=0.485 Sum_probs=30.1
Q ss_pred eEEEECCCCcHHHHHHHHhcc--CCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNH--DAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~--g~~Vtl~~r~~ 237 (433)
+|+|||+|.+|+-+|..|++. |.+|+++.+.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 799999999999999999998 89999998876
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.52 E-value=0.00016 Score=70.95 Aligned_cols=85 Identities=12% Similarity=0.113 Sum_probs=61.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|.+|+-+|..|.+.|.+|+++++.+.+-+. .+ +
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~---------------------------~~---~-------- 238 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY---------------------------KW---P-------- 238 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC---------------------------CC---C--------
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC---------------------------CC---C--------
Confidence 478999999999999999999999999999987633100 00 0
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccCCc
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVPEI 180 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p~~ 180 (433)
.+++++ ..|++++ + .. |++.+| ..+.+|.||+||| ..|..|-+
T Consensus 239 -------~~V~~~--~~V~~i~--~--~~--V~~~dG--------~~i~~D~Vi~atG--~~p~~~~l 281 (464)
T 2xve_A 239 -------ENWDER--PNLVRVD--T--EN--AYFADG--------SSEKVDAIILCTG--YIHHFPFL 281 (464)
T ss_dssp -------TTEEEC--SCEEEEC--S--SE--EEETTS--------CEEECSEEEECCC--BCCCCTTB
T ss_pred -------CceEEc--CCeEEEe--C--CE--EEECCC--------CEEeCCEEEECCC--CCCCCCCc
Confidence 134433 5677764 2 22 667776 5789999999999 66665533
No 285
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.50 E-value=0.0002 Score=70.98 Aligned_cols=35 Identities=29% Similarity=0.444 Sum_probs=32.7
Q ss_pred CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 203 RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 203 ~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...+|+|||+|++|+.+|..|++.|.+|+++.+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 45799999999999999999999999999999887
No 286
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.49 E-value=0.00033 Score=64.64 Aligned_cols=102 Identities=20% Similarity=0.163 Sum_probs=64.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
-++|+|||+|+.|+.+|..|.+.|.+|+++++..... .. .+ .
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~----------------------------------~~-~~---~ 193 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR----------------------------------AS-KT---M 193 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SC-HH---H
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc----------------------------------cc-ch---h
Confidence 3679999999999999999999999999998765210 01 11 1
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVVP 178 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~p 178 (433)
........+...+..+.+..+...... .-.+...+. ...+...+.+|.|++|+| ..|+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~---~~~~~~~i~~d~vi~a~G--~~pn~~ 253 (314)
T 4a5l_A 194 QERVLNHPKIEVIWNSELVELEGDGDL-LNGAKIHNL---VSGEYKVVPVAGLFYAIG--HSPNSK 253 (314)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSS-EEEEEEEET---TTCCEEEEECSEEEECSC--EEESCG
T ss_pred hhhhhcccceeeEeeeeeEEEEeeeec-cceeEEeec---ccccceeeccccceEecc--cccChh
Confidence 122222334455666666676655432 111222221 022347899999999999 666654
No 287
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.47 E-value=0.00015 Score=72.37 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=31.9
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++.+.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 4689999999999999999999999999999886
No 288
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.43 E-value=0.00042 Score=74.15 Aligned_cols=99 Identities=15% Similarity=0.080 Sum_probs=70.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDYL 113 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 113 (433)
++|+|||+|+.|+.+|..|.+.|.+|+|+++.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~~------ 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------AA------ 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------HH------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------hh------
Confidence 689999999999999999999999999999976320 11
Q ss_pred HHHHHHcCCcceecceEEEEEEeCCCCeEEEEEee--cCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 114 EAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTV--GGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 114 ~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~--g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+++.++++++++.|+++..+++.....|++.+ . ...+++..++.+|.||+|+| .+|+.
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~-~~~~G~~~~i~~D~Vv~a~G--~~P~~ 385 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDE-ARELGGTQRFEADVLAVAGG--FNPVV 385 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECT-TCCEEEEEEEECSEEEEECC--EEECC
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccc-cCCCCceEEEEcCEEEECCC--cCcCh
Confidence 34467789999999999999874111222344432 0 00012236899999999999 55654
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.42 E-value=0.00053 Score=63.29 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=31.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
++|+|||||+.|+.+|..|.+.|.+|+++++.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 6899999999999999999999999999998763
No 290
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.39 E-value=0.00037 Score=66.40 Aligned_cols=142 Identities=14% Similarity=0.053 Sum_probs=74.2
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchH-HHHHHHHHHHHHhhcccc
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMR-LVDKLLLVVSWLMLGDTA 282 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 282 (433)
..+|+|||+|.+|+.+|..|++.|.+|+++.+.+. ... .+. ...+.......+... ..+.+ ... .....
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~-~~~---~~~-~~~l~~~~~~~l~~~g~~~~~----~~~-~~~~~ 80 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE-LRA---FGA-GIYLWHNGLRVLEGLGALDDV----LQG-SHTPP 80 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-CCC---CSS-EEEEEHHHHHHHHHTTCHHHH----HTT-CBCCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCC---CCc-eEEeCccHHHHHHHcCCHHHH----Hhh-CCCcc
Confidence 46899999999999999999999999999998772 111 011 011110000000000 00000 000 00000
Q ss_pred ccCCCCCCCCccc-cc-----ccCCCccccCchhhhhhhcCCeEEecC--ceEEeCC-eEEEcCCcEecccEEEEccCCC
Q 013943 283 RFGLDRPLLGPLQ-LK-----NLSGKTPVLDAGTLAKIKSGHIRVFPG--IKRLKRY-AVEFVNGRCENFDAIILATGYR 353 (433)
Q Consensus 283 ~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~~~~~-~v~~~~g~~~~~D~vi~atG~~ 353 (433)
...+... ...+. .. .....+..+...+.+.+.+.+++++.+ +..+..+ .+++.+|+++.+|+||.|+|..
T Consensus 81 ~~~~~~~-g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 81 TYETWMH-NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp CEEEEET-TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTT
T ss_pred ceEEEeC-CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCcc
Confidence 0000000 00000 00 000011233444555666678888876 6666533 6777889899999999999987
Q ss_pred CCC
Q 013943 354 SNV 356 (433)
Q Consensus 354 ~~~ 356 (433)
+..
T Consensus 160 s~v 162 (379)
T 3alj_A 160 SKV 162 (379)
T ss_dssp CHH
T ss_pred HHH
Confidence 753
No 291
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.36 E-value=0.00039 Score=66.78 Aligned_cols=33 Identities=12% Similarity=0.288 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 369999999999999999999999999999886
No 292
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.36 E-value=0.00028 Score=68.91 Aligned_cols=35 Identities=11% Similarity=-0.036 Sum_probs=31.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCC-EEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIP-SILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~-v~iie~~~ 66 (433)
.-++|+|||+|++|+-+|..|.+.+.+ |+++++..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 347899999999999999999999998 99998875
No 293
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.36 E-value=0.00026 Score=70.75 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=32.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
-++|+|||+|..|+.+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999999999999999874
No 294
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.33 E-value=9e-05 Score=74.02 Aligned_cols=37 Identities=32% Similarity=0.299 Sum_probs=32.2
Q ss_pred cCCCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKE-RGIPSILLERSNC 67 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~-~g~~v~iie~~~~ 67 (433)
...||+||||+|.+|+.+|.+|.+ .+++|+|+|++..
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 346999999999999999999998 5789999999864
No 295
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.26 E-value=0.00035 Score=65.03 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=30.6
Q ss_pred CeEEEECCCCcHHHHHHHHhcc--CCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNH--DAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~--g~~Vtl~~r~~ 237 (433)
..|+|||+|..|+-+|..|++. |.+|+++.+.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4799999999999999999997 89999999886
No 296
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.25 E-value=0.00023 Score=73.87 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=70.2
Q ss_pred CCeEEEC--CChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHH
Q 013943 34 PGPVIVG--AGPSGLATAACLKERGIPSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVD 111 (433)
Q Consensus 34 ~dVvIIG--aG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (433)
++|+||| +|..|+.+|..|.+.|.+|+++++.+ +...... + .. ..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~--------------------------~--~~----~~ 575 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF--------------------------T--LE----YP 575 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH--------------------------T--TC----HH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc--------------------------c--cc----HH
Confidence 5899999 99999999999999999999999876 4210000 0 01 23
Q ss_pred HHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEE--eecCc-----------CCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 112 YLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKT--TVGGQ-----------KCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 112 ~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~--~~g~~-----------~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
.+.+.+++.+++++++++|++++.+ ..++.. .++.. ...+++..+.+|.||+|+| ..|..
T Consensus 576 ~~~~~l~~~GV~i~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G--~~p~~ 648 (729)
T 1o94_A 576 NMMRRLHELHVEELGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTG--RHSEC 648 (729)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESC--EEECC
T ss_pred HHHHHHHhCCCEEEcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCC--CCCCh
Confidence 4555667789999999999998632 233332 11100 0012234599999999999 55543
No 297
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.23 E-value=0.0002 Score=71.90 Aligned_cols=36 Identities=42% Similarity=0.571 Sum_probs=33.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
..||+||||+|++|+.+|.+|.+.|++|+++|++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999863
No 298
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.22 E-value=0.00029 Score=70.60 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+.+|..|.+.|.+|+++.+++
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 489999999999999999999999999999876
No 299
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.21 E-value=0.0012 Score=64.64 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=30.1
Q ss_pred CCCeEEECCChHHHHHHHHHH--------------------HcCC-CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLK--------------------ERGI-PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~--------------------~~g~-~v~iie~~~ 66 (433)
-++|+|||+|..|+.+|..|. +.+. +|+|+++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 478999999999999999999 5677 699999876
No 300
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.21 E-value=0.00052 Score=66.98 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999876
No 301
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.20 E-value=0.00099 Score=65.09 Aligned_cols=137 Identities=18% Similarity=0.171 Sum_probs=70.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHc--------------------CC-CEEEEecCCCCCCccccc------ccCceeeecC
Q 013943 33 VPGPVIVGAGPSGLATAACLKER--------------------GI-PSILLERSNCIASLWQLK------TYDRLRLHLP 85 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~--------------------g~-~v~iie~~~~~gg~w~~~------~~~~~~~~~~ 85 (433)
-.+|+|||+|..|+.+|..|.+. +. +|+++++...+...+... ..+.......
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~ 226 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVID 226 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeC
Confidence 46899999999999999999874 54 899999876432111100 0000000000
Q ss_pred CceeecCCCCCCCCCCCCC-CHHHHHHHHHHHHHH------cCCcceecceEEEEEEeCCCCeEEEEEee--cC------
Q 013943 86 KQFCELPLMGFPSEFPTYP-SKQQFVDYLEAYAKR------FEIRPRFNETVSQAEYDATIRFWRVKTTV--GG------ 150 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~------~~l~~~~~~~v~~v~~~~~~~~~~v~~~~--g~------ 150 (433)
.. .+. ..........+ ....+.+.+.+++.+ .++++++++.++++..++....+++.... +.
T Consensus 227 ~~--~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~ 303 (456)
T 1lqt_A 227 PA--ELD-GITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVA 303 (456)
T ss_dssp GG--GGT-TCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEE
T ss_pred hH--Hhc-cchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCccccc
Confidence 00 000 00000000000 012223445555544 67888999999988754321223332110 00
Q ss_pred cCCCceeEEEEeCEEEEccCCC
Q 013943 151 QKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 151 ~~~~~~~~~~~~d~viiAtG~~ 172 (433)
....++..++.+|.||+|+|..
T Consensus 304 ~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 304 AKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp EEEEEEEEEEECSEEEECSCEE
T ss_pred ccCCCceEEEEcCEEEEccccc
Confidence 0002234679999999999943
No 302
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.20 E-value=0.00044 Score=71.14 Aligned_cols=127 Identities=15% Similarity=-0.024 Sum_probs=66.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEe--cCCCCCCc---ccccc----cCceeeecCCceeecCCCCCCCCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLE--RSNCIASL---WQLKT----YDRLRLHLPKQFCELPLMGFPSEFPTY 103 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie--~~~~~gg~---w~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
-++|+|||||+.|+.+|..|.+.|.+++++- -....+.. ..... .+... .......-+...+ ......
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~~~--~~l~~~ 570 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIP-RSPRQIVMLQRKA--SKPGQG 570 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCC-CCSSEEEEECSSC--SCTTTT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccC-CCCcEEEEEEecc--hhhccc
Confidence 3689999999999999999999887665320 00000000 00000 00000 0000000000000 000000
Q ss_pred CCHHHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCc
Q 013943 104 PSKQQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAV 176 (433)
Q Consensus 104 ~~~~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~ 176 (433)
. ......++.+.+++.+++++.+++|++++. +.+++. .+ ++...+.+|.||+|+| .+|+
T Consensus 571 l-~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~------G~~~~i~~D~Vi~a~G--~~p~ 629 (671)
T 1ps9_A 571 L-GKTTGWIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-IN------GETQVLAVDNVVICAG--QEPN 629 (671)
T ss_dssp S-CTTTHHHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ET------TEEEEECCSEEEECCC--EEEC
T ss_pred c-ccccHHHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cC------CeEEEEeCCEEEECCC--cccc
Confidence 0 112234556667788999999999998872 233343 32 2236799999999999 5554
No 303
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.19 E-value=0.0003 Score=70.98 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=41.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCCCcccccc
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIASLWQLKT 76 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~gg~w~~~~ 76 (433)
.|||+|||+|..|..+|..|.+.|.+|+++|++++.||.|....
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~ 51 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFS 51 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccccc
Confidence 59999999999999999999999999999999999999987743
No 304
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.14 E-value=0.0028 Score=60.67 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999886
No 305
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.09 E-value=0.00016 Score=73.91 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=34.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC--------CCEEEEecCC-CC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG--------IPSILLERSN-CI 68 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g--------~~v~iie~~~-~~ 68 (433)
..++|+|||||++|+++|..|.+.| ++|+|+|+++ .+
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 3578999999999999999999998 8999999998 88
No 306
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.05 E-value=0.0026 Score=63.60 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|.+.|.+|+++.+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 489999999999999999999999999999876
No 307
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.01 E-value=0.00031 Score=70.58 Aligned_cols=36 Identities=33% Similarity=0.453 Sum_probs=32.7
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKER-GIPSILLERSN 66 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~ 66 (433)
...||+||||||.||+.+|.+|.+. +.+|+|+|++.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3469999999999999999999975 78999999987
No 308
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.98 E-value=0.00026 Score=70.77 Aligned_cols=36 Identities=39% Similarity=0.413 Sum_probs=33.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI 68 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~ 68 (433)
..||+||||+|.+|+.+|.+|.+ |.+|+|+|++...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 45999999999999999999999 9999999998654
No 309
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.95 E-value=0.00038 Score=69.98 Aligned_cols=36 Identities=28% Similarity=0.328 Sum_probs=33.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERG-IPSILLERSNC 67 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g-~~v~iie~~~~ 67 (433)
..||+||||||.||+.+|.+|.+.+ .+|+|+|++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3599999999999999999999987 79999999875
No 310
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.94 E-value=0.0027 Score=61.18 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999998886
No 311
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.88 E-value=0.0052 Score=58.76 Aligned_cols=34 Identities=26% Similarity=0.349 Sum_probs=32.0
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999987
No 312
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.88 E-value=0.005 Score=62.14 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
-.|+|||+|..|+++|..+++.|.+|+++.+++
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 479999999999999999999999999999874
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.88 E-value=0.001 Score=57.82 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=33.3
Q ss_pred CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEec
Q 013943 200 EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRD 236 (433)
Q Consensus 200 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~ 236 (433)
.+..+++|+|||+|.+|...+..|.+.|++|+++.+.
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3567899999999999999999999999999998654
No 314
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.86 E-value=0.0057 Score=65.92 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=64.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCCCCCCcccccccCceeeecCCceeecCCCCCCCCCCCCCCHHHHHHH
Q 013943 34 PGPVIVGAGPSGLATAACLKERGI-PSILLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSEFPTYPSKQQFVDY 112 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~~~gg~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (433)
.+|+|||||..|+.+|..+.+.|. +|+++++.+.. ..+. ...++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~------------------------------~~~~--~~~e~--- 377 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFV------------------------------NIRA--VPEEV--- 377 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGG------------------------------GCCS--CHHHH---
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChh------------------------------hCCC--CHHHH---
Confidence 489999999999999999999996 89999987511 0000 11222
Q ss_pred HHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEee------cCc-CCCceeEEEEeCEEEEccC
Q 013943 113 LEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTV------GGQ-KCGVEEMEYRCRWLVVATG 170 (433)
Q Consensus 113 l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~------g~~-~~~~~~~~~~~d~viiAtG 170 (433)
+.+++.++++++++.+.++..++. ....+++.+ |.. ...++..++.+|.||+|+|
T Consensus 378 --~~~~~~Gv~~~~~~~~~~i~~~~g-~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G 439 (1025)
T 1gte_A 378 --ELAKEEKCEFLPFLSPRKVIVKGG-RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG 439 (1025)
T ss_dssp --HHHHHTTCEEECSEEEEEEEEETT-EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC
T ss_pred --HHHHHcCCEEEeCCCceEEEccCC-eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC
Confidence 345667999988888888876432 111122221 000 0012235799999999999
No 315
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.85 E-value=0.00046 Score=69.47 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 479999999999999999999999999999887
No 316
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.84 E-value=0.0042 Score=59.41 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=32.3
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecCc
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTV 238 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~ 238 (433)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 45899999999999999999999999999998873
No 317
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.82 E-value=0.0048 Score=62.10 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|..|+.+|..|++.|.+|+++.+.+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999998877
No 318
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.79 E-value=0.00091 Score=66.32 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=33.8
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
...+|++|||+|++|+.+|.+|.+.+.+|+++|++..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3458999999999999999999999999999999864
No 319
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.79 E-value=0.00095 Score=66.15 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=33.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCIA 69 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~g 69 (433)
.+|++|||+|++|+.+|.+|.+.|++|+++|++...+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999987543
No 320
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.73 E-value=0.0019 Score=64.99 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
-.|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 479999999999999999999999999999874
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.72 E-value=0.0027 Score=64.07 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=31.8
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..+|+|||||.+|+-+|..|++.|.+|+++.+.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 4699999999999999999999999999998875
No 322
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.68 E-value=0.0031 Score=60.33 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
-+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 379999999999999999999999999999876
No 323
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.66 E-value=0.0011 Score=63.81 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=32.2
Q ss_pred CCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 202 FRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 202 ~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
....+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 345689999999999999999999999999999987
No 324
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.64 E-value=0.0085 Score=57.06 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999887
No 325
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.63 E-value=0.0023 Score=59.43 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999876
No 326
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.62 E-value=0.012 Score=56.52 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=30.5
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999998864
No 327
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.60 E-value=0.00095 Score=67.41 Aligned_cols=37 Identities=30% Similarity=0.364 Sum_probs=33.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKE-RGIPSILLERSNCI 68 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~-~g~~v~iie~~~~~ 68 (433)
..||++|||+|++|+.+|.+|.+ .+.+|+++|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 35899999999999999999999 79999999998643
No 328
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.59 E-value=0.00062 Score=68.22 Aligned_cols=36 Identities=33% Similarity=0.351 Sum_probs=32.6
Q ss_pred CCCeEEECCChHHHHHHHHHHH-cCCCEEEEecCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKE-RGIPSILLERSNCI 68 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~-~g~~v~iie~~~~~ 68 (433)
.||+||||||.||+.+|.+|.+ .+.+|+|+|++...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999998644
No 329
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.52 E-value=0.0036 Score=58.49 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=29.9
Q ss_pred eEEEECCCCcHHHHHHHHhc---cCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCN---HDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~---~g~~Vtl~~r~~ 237 (433)
+|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 79999999999999999999 888999998875
No 330
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.44 E-value=0.0028 Score=62.96 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999998886
No 331
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.44 E-value=0.0071 Score=60.44 Aligned_cols=33 Identities=27% Similarity=0.287 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|.+.|.+|+++.+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999998876
No 332
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.43 E-value=0.0052 Score=61.75 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
-.|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 379999999999999999999999999998877
No 333
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.42 E-value=0.0054 Score=49.19 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=32.8
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
....+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 345689999999999999999999999999999975
No 334
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.41 E-value=0.0059 Score=61.57 Aligned_cols=33 Identities=30% Similarity=0.446 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|..|+++|..+++.|.+|+++.+.+
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 489999999999999999999999999998874
No 335
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.41 E-value=0.005 Score=58.39 Aligned_cols=33 Identities=15% Similarity=0.392 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999998875
No 336
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.38 E-value=0.0093 Score=58.09 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 379999999999999999999999999999887
No 337
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.35 E-value=0.0017 Score=64.90 Aligned_cols=36 Identities=31% Similarity=0.348 Sum_probs=33.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHc-CCCEEEEecCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKER-GIPSILLERSNCI 68 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~~~ 68 (433)
.+|++|||+|++|+.+|.+|.+. +.+|+++|++...
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 48999999999999999999998 8999999998643
No 338
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.34 E-value=0.0043 Score=58.78 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 489999999999999999999999999998875
No 339
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.17 E-value=0.014 Score=58.57 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=31.4
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...|+|||+|..|+.+|..|++.|.+|+++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3479999999999999999999999999998877
No 340
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.12 E-value=0.0071 Score=57.72 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=30.9
Q ss_pred CeEEEECCCCcHHHHHHHHhc-cC-CCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCN-HD-AMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~-~g-~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 489999999999999999999 89 8999998876
No 341
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.11 E-value=0.008 Score=59.37 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=31.8
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3489999999999999999999999999999887
No 342
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.09 E-value=0.008 Score=57.18 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=30.7
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 79999999999999999999999999999887
No 343
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.09 E-value=0.019 Score=57.19 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCeEEEECCCCcHHHHHHHHhc---cCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCN---HDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~---~g~~Vtl~~r~~ 237 (433)
..+|+|||||.+|+-+|..|++ .|.+|+++.+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 3589999999999999999999 899999999865
No 344
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.06 E-value=0.022 Score=58.58 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999999864
No 345
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.04 E-value=0.0097 Score=58.96 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=30.5
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 79999999999999999999999999998877
No 346
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.92 E-value=0.01 Score=47.49 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=31.9
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 35789999999999999999999999999999875
No 347
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=95.92 E-value=0.0011 Score=65.50 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=31.7
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3479999999999999999999999999999887
No 348
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=95.91 E-value=0.016 Score=57.68 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=31.4
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 489999999999999999999999999999887
No 349
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.91 E-value=0.032 Score=55.01 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=30.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER--GIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~ 66 (433)
.-++|+|||+|.+|+.++..|++. +.+|+++-+..
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 447899999999999999999886 56899988775
No 350
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.87 E-value=0.026 Score=57.93 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=31.4
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3689999999999999999999999999999864
No 351
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.57 E-value=0.029 Score=55.73 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.1
Q ss_pred CCeEEEECCCCcHHHHHHHHhc------------cCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCN------------HDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~------------~g~~Vtl~~r~~ 237 (433)
..+|+|||||..|.-+|..|++ .|.+|+++.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4589999999999999999999 889999999865
No 352
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.53 E-value=0.012 Score=47.97 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+|+|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999875
No 353
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.51 E-value=0.021 Score=56.43 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=29.4
Q ss_pred CeEEEECCCCcHHHHHHHHhc---cCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCN---HDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~---~g~~Vtl~~r~~ 237 (433)
.+|+|||||.+|+-+|..|++ .|.+|+++.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 489999999999999999999 899999999875
No 354
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.47 E-value=0.073 Score=53.00 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=29.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
-.|+|||+|..|+-+|..|++ |.+|+++.+.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 379999999999999999999 99999998876
No 355
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.45 E-value=0.093 Score=52.80 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=30.5
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|..|+-+|..+++.|.+|+++.+.+
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 79999999999999999999999999999876
No 356
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.36 E-value=0.04 Score=53.93 Aligned_cols=31 Identities=16% Similarity=0.390 Sum_probs=29.0
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEec
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRD 236 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~ 236 (433)
.|+|||+|..|+-+|..|++.|.+|+++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3899999999999999999999999999877
No 357
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.28 E-value=0.025 Score=45.87 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=31.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999863
No 358
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.23 E-value=0.13 Score=51.84 Aligned_cols=32 Identities=19% Similarity=0.416 Sum_probs=30.1
Q ss_pred eEEEECCCCcHHHHHHHHhccC--CCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHD--AMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g--~~Vtl~~r~~ 237 (433)
.|+|||+|..|+-+|..|++.| .+|+++.+.+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 6999999999999999999999 8999999875
No 359
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.19 E-value=0.014 Score=44.67 Aligned_cols=34 Identities=26% Similarity=0.240 Sum_probs=31.0
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG-IPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g-~~v~iie~~~ 66 (433)
+.+|+|+|+|..|..++..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 467999999999999999999999 8999998864
No 360
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.19 E-value=0.019 Score=57.88 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhcc------CCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNH------DAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~------g~~Vtl~~r~~ 237 (433)
..|+|||+|..|+-+|..|++. |.+|+++.+.+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 4799999999999999999998 99999999886
No 361
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.17 E-value=0.024 Score=45.16 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5679999999999999999999999999999864
No 362
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.16 E-value=0.0099 Score=52.84 Aligned_cols=42 Identities=12% Similarity=0.099 Sum_probs=33.4
Q ss_pred CCCCCCCceEEeeecccc--cccchhhHHHHHHHHHhhhccCCc
Q 013943 379 NGWKGESGLYSVGFTKRG--LLGVAMDAKRIAQDIESCWKAKAP 420 (433)
Q Consensus 379 ~~~~~~~~iya~Gd~~~~--~~~a~~~g~~~a~~i~~~l~~~~~ 420 (433)
..+++.++||++||++.+ +..|+.+|..+|+.|.+.|+.+.+
T Consensus 289 ~~~~~~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~e~~ 332 (336)
T 3kkj_A 289 ALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQLEHH 332 (336)
T ss_dssp SEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC---
T ss_pred ceeeCCCCEEEEecccCCcCHHHHHHHHHHHHHHHHHHhhccCC
Confidence 445678999999998864 557999999999999999987643
No 363
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.11 E-value=0.15 Score=51.46 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=30.5
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|..|+-+|..+++.|.+|+++.+.+
T Consensus 20 DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 20 DAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 79999999999999999999999999999876
No 364
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.05 E-value=0.02 Score=45.35 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999864
No 365
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.92 E-value=0.098 Score=53.32 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=30.3
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|.+|+-.|..+++.|.+|+++.+.+
T Consensus 7 DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~ 38 (660)
T 2bs2_A 7 DSLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (660)
T ss_dssp SEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 69999999999999999999999999998876
No 366
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.85 E-value=0.023 Score=52.04 Aligned_cols=36 Identities=22% Similarity=0.403 Sum_probs=32.9
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..|.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 13 ~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 356789999999999999999999999999999874
No 367
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.84 E-value=0.02 Score=60.40 Aligned_cols=33 Identities=15% Similarity=0.342 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCC-CcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDA-MPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~-~Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|++.|. +|+++.+.+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 479999999999999999999997 999998876
No 368
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.44 E-value=0.054 Score=45.33 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.9
Q ss_pred CCeEEECCChHHHHHHHHHHHc-CCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKER-GIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~-g~~v~iie~~~ 66 (433)
.+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 5799999999999999999999 99999999875
No 369
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=94.44 E-value=0.021 Score=58.26 Aligned_cols=33 Identities=30% Similarity=0.605 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhc-cCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCN-HDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~-~g~~Vtl~~r~~ 237 (433)
..|+|||+|++|+-+|..|++ .|.+|+++.+.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999 899999999887
No 370
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.42 E-value=0.035 Score=50.28 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=32.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 46789999999999999999999999999999875
No 371
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.31 E-value=0.04 Score=50.85 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=29.7
Q ss_pred CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 200 EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 200 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..+...+|.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 15 ~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 15 LYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred hhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3456789999999999999999999999999998 655
No 372
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.20 E-value=0.052 Score=53.41 Aligned_cols=49 Identities=22% Similarity=0.257 Sum_probs=36.3
Q ss_pred HHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCCCCCcc
Q 013943 117 AKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGENAEAVV 177 (433)
Q Consensus 117 ~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~~~p~~ 177 (433)
+++.++++++++.|++++.++ ....+.+.++ .++.+|.||+|+| .+|+.
T Consensus 267 l~~~GV~v~~~~~v~~i~~~~--~v~~v~~~~g--------~~i~aD~Vv~a~G--~~p~~ 315 (493)
T 1y56_A 267 LERWGIDYVHIPNVKRVEGNE--KVERVIDMNN--------HEYKVDALIFADG--RRPDI 315 (493)
T ss_dssp HHHHTCEEEECSSEEEEECSS--SCCEEEETTC--------CEEECSEEEECCC--EEECC
T ss_pred HHhCCcEEEeCCeeEEEecCC--ceEEEEeCCC--------eEEEeCEEEECCC--cCcCc
Confidence 455689999999999997544 3334556554 6899999999999 55543
No 373
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.06 E-value=0.04 Score=53.57 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=32.6
Q ss_pred CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEec
Q 013943 201 DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRD 236 (433)
Q Consensus 201 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~ 236 (433)
+..+++|+|||+|.+|...+..|.+.|++|+++...
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 356899999999999999999999999999999754
No 374
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.99 E-value=0.02 Score=56.32 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=30.4
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
|+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999998765
No 375
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.93 E-value=0.047 Score=52.41 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=35.8
Q ss_pred CCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 28 PRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 28 ~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
|..+.|.+|.|||.|..|+.+|..+++.|++|+.+|-+.
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 556688999999999999999999999999999999875
No 376
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.84 E-value=0.053 Score=49.93 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=31.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46789999999999999999999999999999875
No 377
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.71 E-value=0.11 Score=50.52 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=33.6
Q ss_pred CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 201 DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 201 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+.++++.|||.|.+|+-+|..|.+.|.+|+.+.+++
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3568999999999999999999999999999998765
No 378
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.62 E-value=0.051 Score=44.16 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=33.1
Q ss_pred CCCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 200 EDFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 200 ~~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
....+++++|+|+|..|..++..|...|.+|+++.|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34457899999999999999999999999999998877
No 379
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.59 E-value=0.07 Score=46.22 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
-+.|+|||||..|...+..|.+.|.+|+++++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3799999999999999999999999999998753
No 380
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.59 E-value=0.064 Score=46.33 Aligned_cols=32 Identities=13% Similarity=0.297 Sum_probs=30.3
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999875
No 381
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.44 E-value=0.063 Score=50.44 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=32.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
|+.|+|||||..|..++..+++.|++++++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 78899999999999999999999999999998764
No 382
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.44 E-value=0.035 Score=53.62 Aligned_cols=34 Identities=29% Similarity=0.458 Sum_probs=31.5
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++|+|||+|+.|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 383
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.34 E-value=0.076 Score=51.32 Aligned_cols=39 Identities=31% Similarity=0.497 Sum_probs=35.2
Q ss_pred CCccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 28 PRCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 28 ~~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+++..+.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 49 ~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 49 SEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 445677899999999999999999999999999999876
No 384
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.31 E-value=0.075 Score=48.77 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=31.2
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+|.|||+|..|...|..++..|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5679999999999999999999999999999875
No 385
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.30 E-value=0.051 Score=48.68 Aligned_cols=37 Identities=27% Similarity=0.471 Sum_probs=33.4
Q ss_pred CCCCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 201 DFRGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 201 ~~~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...+++|+|||+|.+|...+..|.+.|++|+++....
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3568999999999999999999999999999997654
No 386
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.24 E-value=0.088 Score=49.29 Aligned_cols=34 Identities=29% Similarity=0.290 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|.|||+|..|.++|..|.+.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999864
No 387
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.05 E-value=0.07 Score=48.84 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=30.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
|.+|.|||+|..|..+|..|.+.|++|++++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4479999999999999999999999999998864
No 388
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.00 E-value=0.048 Score=51.47 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=30.5
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|++|+-+|..|++.|.+|+++.|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999999876
No 389
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.99 E-value=0.079 Score=48.59 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=33.2
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..|.+|.|||.|..|..+|..|.+.|++|+++|+..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 456789999999999999999999999999999875
No 390
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.98 E-value=0.12 Score=47.57 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=30.6
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 489999999999999999999999999998865
No 391
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.82 E-value=0.09 Score=50.83 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=32.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNCI 68 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~~ 68 (433)
.++|+|||.|.+|+++|..|.++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 467999999999999999999999999999987644
No 392
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.73 E-value=0.14 Score=47.00 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=29.9
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999998765
No 393
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.73 E-value=0.16 Score=46.39 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=32.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||.|..|..+|..|.+.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999875
No 394
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.72 E-value=0.094 Score=47.44 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
|.+|.|||.|..|..+|..|.+.|++|++++++.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 4579999999999999999999999999999875
No 395
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=92.52 E-value=0.066 Score=50.47 Aligned_cols=33 Identities=30% Similarity=0.311 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
+.|+|||+|..|++.|..+++.|.+|+++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999998876
No 396
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.52 E-value=0.11 Score=47.68 Aligned_cols=33 Identities=36% Similarity=0.394 Sum_probs=30.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|.|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999998864
No 397
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.39 E-value=0.14 Score=47.41 Aligned_cols=33 Identities=33% Similarity=0.312 Sum_probs=30.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERS 65 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~ 65 (433)
+.+|.|||+|..|..+|..|.+.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 357999999999999999999999999999884
No 398
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.38 E-value=0.044 Score=52.72 Aligned_cols=73 Identities=15% Similarity=0.126 Sum_probs=45.6
Q ss_pred EEecC--ceEEeCC--e--EEEcCCcEecccEEEEccC--------CCCCCCCccccc-cccccCCCCcCCCCCCCCCCC
Q 013943 320 RVFPG--IKRLKRY--A--VEFVNGRCENFDAIILATG--------YRSNVPSWLKES-EMFSRKDGLPRRPFPNGWKGE 384 (433)
Q Consensus 320 ~~~~~--v~~~~~~--~--v~~~~g~~~~~D~vi~atG--------~~~~~~~~~~~~-~l~~~~~g~~~~~~~~~~~~~ 384 (433)
+++.+ |.++..+ + |.+.+|+++.+|.||+|+| +.|+++....+. .... ....+.++ ..+.+..
T Consensus 219 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~-~~~~~kv~-~~~~~~~ 296 (431)
T 3k7m_X 219 EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGH-GGQGLKIL-IHVRGAE 296 (431)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCC-CCCEEEEE-EEEESCC
T ss_pred ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCC-CcceEEEE-EEECCCC
Confidence 55555 8888643 2 5667888899999999999 888875332222 2211 12224444 2334455
Q ss_pred CceEEeeecc
Q 013943 385 SGLYSVGFTK 394 (433)
Q Consensus 385 ~~iya~Gd~~ 394 (433)
++||++||..
T Consensus 297 ~~i~~~~d~~ 306 (431)
T 3k7m_X 297 AGIECVGDGI 306 (431)
T ss_dssp TTEEEEBSSS
T ss_pred cCceEcCCCC
Confidence 7899988874
No 399
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.25 E-value=0.06 Score=48.21 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=31.0
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.|+|||||..|...+..|.+.|.+|+++++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 679999999999999999999999999999864
No 400
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.22 E-value=0.12 Score=44.30 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
+.+|.|||+|..|.++|..|.+.|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45699999999999999999999999999998763
No 401
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.20 E-value=0.12 Score=50.42 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.9
Q ss_pred cCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 31 ICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 31 ~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 457789999999999999999999999999999875
No 402
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.19 E-value=0.11 Score=47.82 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999998864
No 403
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.15 E-value=0.18 Score=43.39 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35679999999999999999999999999998864
No 404
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.13 E-value=0.09 Score=45.54 Aligned_cols=35 Identities=31% Similarity=0.440 Sum_probs=31.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEE-EecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSIL-LERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~i-ie~~~ 66 (433)
.|.+|.|||+|..|.++|..|.+.|++|++ ++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 356899999999999999999999999998 77754
No 405
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.13 E-value=0.11 Score=50.54 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.++|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4789999999999999999999999999999865
No 406
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.10 E-value=0.099 Score=47.87 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=0.0
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecCcceecccccCCcchhhhHHHHhhcchHHHHHHHHHHHHHhhccccccC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDTVHVLPQEMLGKSTFGLSMWLLKWLPMRLVDKLLLVVSWLMLGDTARFG 285 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 285 (433)
+++|||+|..|.-++..|+ .|.+|+++.|++...
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~--------------------------------------------- 37 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQA--------------------------------------------- 37 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHH---------------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHH---------------------------------------------
Q ss_pred CCCCCCCcccccccCCCccccCchhhhhhhcCCeEEecCceEEeCCeEEEcCCcEecccEEEEcc
Q 013943 286 LDRPLLGPLQLKNLSGKTPVLDAGTLAKIKSGHIRVFPGIKRLKRYAVEFVNGRCENFDAIILAT 350 (433)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~v~~~~g~~~~~D~vi~at 350 (433)
+.+++.++.+...-.. ....+...+...-++|+||+|+
T Consensus 38 --------------------------~~l~~~G~~~~~~~~~-~~~~~~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 38 --------------------------AAIQSEGIRLYKGGEE-FRADCSADTSINSDFDLLVVTV 75 (307)
T ss_dssp --------------------------HHHHHHCEEEEETTEE-EEECCEEESSCCSCCSEEEECC
T ss_pred --------------------------HHHHhCCceEecCCCe-ecccccccccccCCCCEEEEEe
No 407
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.04 E-value=0.15 Score=46.31 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=30.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|+|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 408
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.90 E-value=0.13 Score=41.61 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=31.3
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999998874
No 409
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.88 E-value=0.12 Score=48.86 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
-.+|+|||+|.+|+.+|..+...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3689999999999999999999999999999876
No 410
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.85 E-value=0.15 Score=47.11 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=30.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 479999999999999999999998 999999875
No 411
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.77 E-value=0.1 Score=49.48 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=30.6
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 79999999999999999999999999999876
No 412
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.72 E-value=0.065 Score=50.41 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=30.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
|.+|.|||+|..|..+|..|.+.|++|+++++..
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3379999999999999999999999999998864
No 413
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.62 E-value=0.12 Score=47.02 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
|.+|.|||+|..|..+|..|.+.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5689999999999999999999999999998874
No 414
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.56 E-value=0.14 Score=46.55 Aligned_cols=35 Identities=14% Similarity=-0.005 Sum_probs=32.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
..+|.|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999863
No 415
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.55 E-value=0.14 Score=47.77 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=30.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999998864
No 416
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.50 E-value=0.1 Score=48.70 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 417
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.49 E-value=0.2 Score=51.67 Aligned_cols=37 Identities=27% Similarity=0.280 Sum_probs=33.8
Q ss_pred ccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 30 CICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 30 ~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
...+.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 309 ~~~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 309 PRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cccCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3567899999999999999999999999999999875
No 418
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.47 E-value=0.24 Score=45.43 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999998865
No 419
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.43 E-value=0.22 Score=44.67 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=31.2
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
++|+|+|+|.+|-.++..|.+.|.+|+.+.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 689999999999999999999999999999886
No 420
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.38 E-value=0.15 Score=45.94 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=30.5
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
+|.|||+|..|..+|..|.+.|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 489999999999999999999999999998763
No 421
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.36 E-value=0.16 Score=47.60 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=31.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||.|..|..+|..|.+.|++|+++++..
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34679999999999999999999999999999875
No 422
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.36 E-value=0.15 Score=49.69 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=33.1
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc-CC-CEEEEecCCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER-GI-PSILLERSNC 67 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~-g~-~v~iie~~~~ 67 (433)
.+.+|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 456799999999999999999999 99 9999999875
No 423
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.31 E-value=0.17 Score=46.77 Aligned_cols=35 Identities=23% Similarity=0.181 Sum_probs=31.5
Q ss_pred CCCCeEEECCChHHHH-HHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLA-TAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~-~A~~L~~~g~~v~iie~~~ 66 (433)
.+++|.|||.|.+|++ +|..|.++|++|++.|...
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4678999999999996 7888999999999999875
No 424
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.27 E-value=0.097 Score=50.13 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=30.6
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 379999999999999999999999999998875
No 425
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=91.27 E-value=0.13 Score=49.19 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=31.3
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCC-cEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAM-PSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~-Vtl~~r~~ 237 (433)
.+|+|||+|.+|+-+|..|++.|.+ |+++.+.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4899999999999999999999999 99999987
No 426
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=91.25 E-value=0.091 Score=49.64 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.7
Q ss_pred CeEEEECCCCcHHHHHHHHhcc--CCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNH--DAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~--g~~Vtl~~r~~ 237 (433)
.+|+|||+|..|+-+|..|++. |.+|+++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3799999999999999999999 99999999876
No 427
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.25 E-value=0.27 Score=44.15 Aligned_cols=34 Identities=32% Similarity=0.381 Sum_probs=31.5
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|+|.|+|..|..++..|.+.|++|+++.+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4679999999999999999999999999998875
No 428
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.23 E-value=0.18 Score=46.39 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=30.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
..+|.|||+|..|..+|..|.+.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3579999999999999999999998 999999865
No 429
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.21 E-value=0.086 Score=49.43 Aligned_cols=32 Identities=9% Similarity=0.154 Sum_probs=30.4
Q ss_pred eEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 79999999999999999999999999998875
No 430
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.14 E-value=0.15 Score=47.74 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=31.7
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
.-.+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34689999999999999999999998 999999873
No 431
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=91.14 E-value=0.11 Score=48.89 Aligned_cols=33 Identities=30% Similarity=0.357 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 379999999999999999999999999998875
No 432
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.11 E-value=0.18 Score=51.91 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=34.8
Q ss_pred CccCCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 29 RCICVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 29 ~~~~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+...++.|.|||+|..|-..|..++..|++|+++|...
T Consensus 312 ~~~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 312 SAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CcccccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 44678999999999999999999999999999999875
No 433
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.01 E-value=0.18 Score=46.32 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=30.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI--PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~ 66 (433)
+.+|+|||+|..|..+|..|.+.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3579999999999999999999998 999998864
No 434
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.01 E-value=0.14 Score=47.93 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
-.+|+|||+|..|+.+|..+...|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999875
No 435
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.98 E-value=0.25 Score=48.25 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=32.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 36789999999999999999999999999999875
No 436
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.93 E-value=0.2 Score=46.05 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=31.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
.+.+|.|||+|..|.++|..|...++ +++++|...
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 45679999999999999999999998 999998865
No 437
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.87 E-value=0.17 Score=48.84 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=31.9
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSNC 67 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~~ 67 (433)
-+|.|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999999874
No 438
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.86 E-value=0.18 Score=49.37 Aligned_cols=35 Identities=29% Similarity=0.334 Sum_probs=31.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER--GIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~ 66 (433)
++.+|.|||+|..|+.+|..|++. |++|+++|++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 345799999999999999999998 68999999864
No 439
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.81 E-value=0.21 Score=43.93 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=31.6
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
...+|.|||+|..|..+|..|.+.|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34679999999999999999999999999999875
No 440
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.81 E-value=0.27 Score=46.99 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=31.1
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999975
No 441
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.81 E-value=0.36 Score=44.51 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=30.4
Q ss_pred CCeEEEECCCCcHHH-HHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGME-VCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e-~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+++.|||.|-+|+. +|..|.+.|.+|+...++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 479999999999997 8888999999999988765
No 442
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=90.79 E-value=0.11 Score=51.05 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=31.7
Q ss_pred CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 203 RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 203 ~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..++|+|||+|.+|+.+|..|.+.|.+|+++.+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35689999999999999999999999999998765
No 443
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.69 E-value=0.2 Score=39.70 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=31.8
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++++|+|.|..|..++..|.+.|.+|+++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999999887
No 444
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.61 E-value=0.23 Score=45.70 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=30.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
+.+|.|||+|..|..+|..|+..|+ +++++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4579999999999999999999998 899998765
No 445
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=90.61 E-value=0.31 Score=47.67 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHcC-CcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCC
Q 013943 106 KQQFVDYLEAYAKRFE-IRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 106 ~~~~~~~l~~~~~~~~-l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~ 172 (433)
...+.+.+.+.+.+.+ ++++++++|++|+..+ +.+.|++.+| ..+++|+||+|+|..
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v~v~~~~g--------~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAARVTARDG--------REFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS--SSEEEEETTC--------CEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEEEEEECCC--------CEEEcCEEEECCCHH
Confidence 4456666666666666 7899999999999876 4577877765 579999999999953
No 446
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.59 E-value=0.076 Score=42.47 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=30.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
-.+|+|||+|..|..+|..|.+.|.+++++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4679999999999999999999998888988864
No 447
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.58 E-value=0.18 Score=46.34 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=32.0
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||.|..|..+|..|.+.|++|+++++..
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35689999999999999999999999999999875
No 448
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.58 E-value=0.2 Score=48.52 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=30.5
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 449
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.51 E-value=0.3 Score=44.40 Aligned_cols=34 Identities=35% Similarity=0.496 Sum_probs=31.4
Q ss_pred CCCeEEEC-CChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVG-AGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIG-aG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|.||| +|..|.++|..|.+.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46899999 99999999999999999999998865
No 450
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.46 E-value=0.15 Score=47.65 Aligned_cols=33 Identities=33% Similarity=0.502 Sum_probs=30.8
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 489999999999999999999999999998865
No 451
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.46 E-value=0.18 Score=49.15 Aligned_cols=33 Identities=33% Similarity=0.567 Sum_probs=30.7
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999864
No 452
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.44 E-value=0.22 Score=45.41 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|.|||+|..|..+|..|.+.|++|+++|++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 453
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.35 E-value=0.18 Score=39.82 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.1
Q ss_pred CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 203 RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 203 ~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999988765
No 454
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.34 E-value=0.16 Score=39.96 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=30.3
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
+.+++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999998765
No 455
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.32 E-value=0.14 Score=38.95 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.8
Q ss_pred CCeEEEECCCCcHHHHHHHHhccC-CCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHD-AMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g-~~Vtl~~r~~ 237 (433)
.++++|+|+|.+|..++..|.+.| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 7899988876
No 456
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.31 E-value=0.18 Score=49.08 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=31.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHc--CCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKER--GIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~--g~~v~iie~~~ 66 (433)
.|.+|.|||+|..|..+|..|++. |++|+++|++.
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 345799999999999999999999 78999999864
No 457
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.24 E-value=0.16 Score=40.22 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=31.5
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999998876
No 458
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.20 E-value=0.23 Score=45.03 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=30.8
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.|.|||+|..|-..|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 478999999999999999999 999999999875
No 459
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.19 E-value=0.16 Score=48.55 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=31.2
Q ss_pred CCeEEEECCCCcHHHHHHHHhccC-CCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHD-AMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g-~~Vtl~~r~~ 237 (433)
..+|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 468999999999999999999999 8999998765
No 460
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.17 E-value=0.21 Score=47.88 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+.+|.|||+|..|+.+|..|++ |++|+++|+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 45679999999999999999998 99999999875
No 461
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.14 E-value=0.25 Score=44.49 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=29.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|.|||+|..|...|..|.+ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 469999999999999999999 99999998865
No 462
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.12 E-value=0.31 Score=47.42 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=31.9
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|.|||.|..|..+|..|.+.|++|+++++..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5679999999999999999999999999999876
No 463
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.03 E-value=0.25 Score=44.34 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=30.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI--PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~ 66 (433)
|.+|.|||+|..|..+|..|.+.|+ +|+++|++.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 3469999999999999999999998 899998864
No 464
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.00 E-value=0.23 Score=44.87 Aligned_cols=32 Identities=28% Similarity=0.279 Sum_probs=30.3
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+|.|||+|..|..+|..|.+.|++|++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999999875
No 465
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=89.99 E-value=0.15 Score=49.60 Aligned_cols=35 Identities=31% Similarity=0.399 Sum_probs=30.9
Q ss_pred CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 203 RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 203 ~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
...+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~ 49 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 49 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 45689999999999999999999999999998776
No 466
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.95 E-value=0.22 Score=46.54 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=31.2
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI-PSILLERS 65 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~ 65 (433)
.-.+|+|+|||.+|..+|..|...|. +++++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 44789999999999999999999998 79999987
No 467
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=89.91 E-value=0.16 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=30.3
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.++|+|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 468999999999999999999 599999998875
No 468
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=89.90 E-value=0.15 Score=49.57 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=30.5
Q ss_pred CeEEEECCCCcHHHHHHHHhccCC--CcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDA--MPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~--~Vtl~~r~~ 237 (433)
++|+|||+|.+|+-+|..|++.|. +|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999998 999998765
No 469
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.88 E-value=0.24 Score=45.81 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=29.7
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEec
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRD 236 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~ 236 (433)
.+|.|||+|..|.-+|..|++.|.+|+++.|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999998774
No 470
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.85 E-value=0.24 Score=43.73 Aligned_cols=33 Identities=30% Similarity=0.419 Sum_probs=30.3
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
.+|+|||+|-.|..+|..|.+.|. +++++|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 469999999999999999999998 899999875
No 471
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=89.83 E-value=0.32 Score=46.55 Aligned_cols=35 Identities=17% Similarity=0.107 Sum_probs=31.8
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+.|+|+|+|..|..++..+.+.|+++.++|..+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 44689999999999999999999999999998765
No 472
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=89.83 E-value=0.18 Score=48.49 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=31.1
Q ss_pred CeEEEECCCCcHHHHHHHHhccCC-CcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDA-MPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~-~Vtl~~r~~ 237 (433)
..|+|||+|..|+-+|..|++.|. +|+++.+.+
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 479999999999999999999999 999999876
No 473
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.79 E-value=0.26 Score=46.40 Aligned_cols=35 Identities=14% Similarity=0.073 Sum_probs=31.7
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-------CCEEEEecCCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG-------IPSILLERSNC 67 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g-------~~v~iie~~~~ 67 (433)
|.+|.|||+|..|..+|..|.+.| ++|+++++...
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 457999999999999999999999 99999998764
No 474
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=89.71 E-value=0.18 Score=47.54 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=31.7
Q ss_pred CCCeEEEECCCCcHHHHHHHHhccCCCcEEEEec
Q 013943 203 RGKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRD 236 (433)
Q Consensus 203 ~~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~ 236 (433)
...+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4579999999999999999999999999999887
No 475
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.66 E-value=0.21 Score=43.11 Aligned_cols=35 Identities=29% Similarity=0.265 Sum_probs=31.7
Q ss_pred CCCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGA-GPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGa-G~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.|++|+|.|| |..|..++..|.+.|++|+++++..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4578999996 9999999999999999999999875
No 476
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.66 E-value=0.3 Score=45.06 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.4
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC-CEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGI-PSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~~ 66 (433)
.+|.|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999998 999999875
No 477
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.64 E-value=0.29 Score=44.80 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=30.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERS 65 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~ 65 (433)
..+|.|||+|..|..+|..|+..|+ +++++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4679999999999999999999999 99999886
No 478
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.56 E-value=0.23 Score=44.53 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=31.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|+|.|+|..|-.++..|.+.|++|+++.+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4679999999999999999999999999998875
No 479
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.54 E-value=0.27 Score=45.17 Aligned_cols=33 Identities=27% Similarity=0.289 Sum_probs=29.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+.+|.|||+|..|.++|..|.+.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 467999999999999999999999999999 543
No 480
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.54 E-value=0.4 Score=43.13 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=31.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC---CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI---PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~---~v~iie~~~ 66 (433)
+.+|.|||+|..|.+.|..|.+.|+ +|+++|++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4679999999999999999999998 899999875
No 481
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.54 E-value=0.25 Score=47.05 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=31.1
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
-..|+|||+|.+|+.+|..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3679999999999999999999999999999875
No 482
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=89.54 E-value=0.66 Score=45.06 Aligned_cols=58 Identities=10% Similarity=0.044 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCcceecceEEEEEEeCCCCeEEEEEeecCcCCCceeEEEEeCEEEEccCCC
Q 013943 107 QQFVDYLEAYAKRFEIRPRFNETVSQAEYDATIRFWRVKTTVGGQKCGVEEMEYRCRWLVVATGEN 172 (433)
Q Consensus 107 ~~~~~~l~~~~~~~~l~~~~~~~v~~v~~~~~~~~~~v~~~~g~~~~~~~~~~~~~d~viiAtG~~ 172 (433)
.++.+.+.+.+++.|++++++++|+++..+++...+.|.+.+| +++.||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G--------~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDG--------EIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTS--------CEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCC--------cEEECCEEEECCCcc
Confidence 5778888888999999999999999999843335566777766 679999999999953
No 483
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=89.46 E-value=0.19 Score=49.38 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=29.5
Q ss_pred CeEEEECCCCcHHHHHHHHhcc-CCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNH-DAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~-g~~Vtl~~r~~ 237 (433)
-.|+|||+|.+|+-+|..|++. |.+|+++.+++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 3799999999999999999875 89999998776
No 484
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.40 E-value=0.12 Score=50.27 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=30.3
Q ss_pred CeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 35 GPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+|+|+|+|-.|..+|..|.+.|++|+++|+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 39999999999999999999999999999975
No 485
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.38 E-value=0.41 Score=42.10 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=30.5
Q ss_pred CCeEEECCChHHHHHHHHHHHcCC----CEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGI----PSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~----~v~iie~~~ 66 (433)
.+|.|||+|..|...|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999998865
No 486
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.37 E-value=0.42 Score=44.25 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=30.9
Q ss_pred CCCeEEECC-ChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGA-GPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGa-G~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
+..|+|.|| |..|-.++..|.+.|++|+++.+..
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 467999999 9999999999999999999999875
No 487
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.34 E-value=0.28 Score=44.88 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=29.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcC--CCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERG--IPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g--~~v~iie~~~ 66 (433)
.+|.|||+|..|..+|..|.+.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 46999999999999999999999 6899998864
No 488
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=89.33 E-value=0.26 Score=44.82 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=32.3
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.|++|-+||-|..|..+|.+|.+.|++|+++|+.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 47889999999999999999999999999999875
No 489
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.30 E-value=0.44 Score=44.16 Aligned_cols=34 Identities=21% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
..+|.|||.|..|-++|..|.+.|++|+++|++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 490
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=89.25 E-value=0.16 Score=47.23 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=29.8
Q ss_pred eEEEECCCCcHHHHHHHHhccC------CCcEEEEecC
Q 013943 206 RVLVVGCGNSGMEVCLDLCNHD------AMPSLVVRDT 237 (433)
Q Consensus 206 ~v~VvG~G~~a~e~a~~l~~~g------~~Vtl~~r~~ 237 (433)
.|+|||+|.+|+-+|..|++.| .+|+++.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 7999999875
No 491
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.25 E-value=0.27 Score=45.02 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=30.4
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC-CEEEEecC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI-PSILLERS 65 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~-~v~iie~~ 65 (433)
+.+|.|||.|..|..+|..|.+.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 5689999999999999999999999 99999985
No 492
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.24 E-value=0.29 Score=46.27 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=31.5
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.-.+|+|||+|.+|+.++..+...|.+|+++|+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999998875
No 493
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.22 E-value=0.26 Score=45.23 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcC-CCEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERG-IPSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g-~~v~iie~~~ 66 (433)
+.+|.|||.|..|..+|..|.+.| ++|+++++..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999875
No 494
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.19 E-value=0.29 Score=44.53 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=30.4
Q ss_pred CCCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 013943 32 CVPGPVIVGAGPSGLATAACLKERGI--PSILLERSN 66 (433)
Q Consensus 32 ~~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~ 66 (433)
.+.+|.|||+|..|..+|..|...++ +++++|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 45789999999999999999999998 899998865
No 495
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=89.13 E-value=0.21 Score=48.79 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.0
Q ss_pred CCeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 204 GKRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 204 ~~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 5689999999999999999999999999997764
No 496
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.12 E-value=0.37 Score=44.16 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=31.3
Q ss_pred CCCeEEECCChHHHHHHHHHHHcCC--CEEEEecCC
Q 013943 33 VPGPVIVGAGPSGLATAACLKERGI--PSILLERSN 66 (433)
Q Consensus 33 ~~dVvIIGaG~aGl~~A~~L~~~g~--~v~iie~~~ 66 (433)
+.+|.|||+|..|-.+|..|.+.|+ +|+++|++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 899999875
No 497
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.11 E-value=0.32 Score=45.03 Aligned_cols=33 Identities=33% Similarity=0.390 Sum_probs=30.6
Q ss_pred CCeEEECCChHHHHHHHHHHHcCCCEEEEecCC
Q 013943 34 PGPVIVGAGPSGLATAACLKERGIPSILLERSN 66 (433)
Q Consensus 34 ~dVvIIGaG~aGl~~A~~L~~~g~~v~iie~~~ 66 (433)
.+|.|||+|..|..+|..|.+.|++|+++++..
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999998864
No 498
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=89.09 E-value=0.24 Score=46.89 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=30.5
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+++|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 489999999999999999999999999998865
No 499
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=89.07 E-value=0.19 Score=48.72 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=31.0
Q ss_pred CeEEEECCCCcHHHHHHHHhccCCCcEEEEecC
Q 013943 205 KRVLVVGCGNSGMEVCLDLCNHDAMPSLVVRDT 237 (433)
Q Consensus 205 ~~v~VvG~G~~a~e~a~~l~~~g~~Vtl~~r~~ 237 (433)
.+|+|||+|..|+-+|..|++.|.+|+++.+++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999998876
No 500
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.04 E-value=0.24 Score=45.30 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=28.6
Q ss_pred CeEEECCChHHHHHHHHHHHc-----C-CCEEEEec
Q 013943 35 GPVIVGAGPSGLATAACLKER-----G-IPSILLER 64 (433)
Q Consensus 35 dVvIIGaG~aGl~~A~~L~~~-----g-~~v~iie~ 64 (433)
+|.|||+|..|..+|..|.+. | ++|+++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 699999999999999999998 9 99999987
Done!