Query 013946
Match_columns 433
No_of_seqs 291 out of 2335
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 20:03:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013946.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013946hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 4.4E-82 1.5E-86 629.0 37.8 422 7-432 3-427 (427)
2 4ewg_A Beta-ketoacyl synthase; 100.0 3.4E-81 1.2E-85 620.2 40.0 405 20-433 4-412 (412)
3 1e5m_A KAS II, beta ketoacyl a 100.0 3.3E-81 1.1E-85 621.0 39.1 411 19-433 4-416 (416)
4 3o04_A LMO2201 protein, beta-k 100.0 1.5E-80 5.2E-85 616.1 39.5 410 19-433 1-412 (413)
5 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 5.1E-80 1.8E-84 615.1 40.0 407 22-433 28-436 (437)
6 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 7.9E-80 2.7E-84 612.1 39.8 412 18-433 6-427 (428)
7 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 2.9E-80 1E-84 613.4 36.3 405 22-432 2-408 (408)
8 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 1.3E-79 4.6E-84 612.2 36.8 407 21-432 20-438 (438)
9 1ox0_A Beta ketoacyl-acyl carr 100.0 5.9E-79 2E-83 607.0 39.1 408 19-433 20-428 (430)
10 3mqd_A Beta-ketoacyl synthase; 100.0 1.9E-79 6.7E-84 609.7 34.2 410 13-433 14-427 (428)
11 2vba_A 3-oxoacyl-[acyl-carrier 100.0 2.4E-79 8.2E-84 605.4 34.2 399 22-433 2-405 (406)
12 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 2.8E-78 9.5E-83 601.2 41.2 406 19-432 25-434 (434)
13 1tqy_B Actinorhodin polyketide 100.0 5.6E-79 1.9E-83 605.2 35.8 404 20-433 7-412 (415)
14 1tqy_A Beta-ketoacyl synthase/ 100.0 2.1E-79 7.3E-84 609.9 32.4 406 22-432 3-417 (424)
15 2wge_A 3-oxoacyl-[acyl-carrier 100.0 1.6E-78 5.5E-83 600.6 37.4 405 19-432 9-416 (416)
16 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 9.3E-79 3.2E-83 608.4 34.9 410 21-433 23-443 (451)
17 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 1E-77 3.4E-82 598.0 32.0 404 22-432 1-431 (431)
18 3hhd_A Fatty acid synthase; tr 100.0 1.2E-74 4.3E-79 621.5 38.1 394 21-432 3-409 (965)
19 2vz8_A Fatty acid synthase; tr 100.0 4.5E-73 1.5E-77 657.5 38.0 394 21-432 1-407 (2512)
20 2hg4_A DEBS, 6-deoxyerythronol 100.0 1E-72 3.5E-77 604.6 34.1 397 21-432 38-453 (917)
21 2qo3_A Eryaii erythromycin pol 100.0 2.4E-72 8.3E-77 601.6 35.8 397 21-432 5-431 (915)
22 2uv8_A Fatty acid synthase sub 100.0 1.1E-63 3.8E-68 550.7 24.0 398 22-432 1150-1658(1887)
23 2uv9_A Fatty acid synthase alp 100.0 9.3E-64 3.2E-68 550.0 21.5 391 36-432 1132-1639(1878)
24 2pff_A Fatty acid synthase sub 100.0 8.4E-66 2.9E-70 549.0 3.7 390 37-432 959-1459(1688)
25 3zen_D Fatty acid synthase; tr 100.0 2.3E-61 8E-66 556.1 27.6 367 64-432 2617-3011(3089)
26 1wdk_C 3-ketoacyl-COA thiolase 100.0 3.5E-37 1.2E-41 302.4 20.9 271 92-431 30-389 (390)
27 1wl4_A Acetyl-coenzyme A acety 100.0 1.7E-36 6E-41 298.2 24.8 269 93-431 31-396 (397)
28 1ulq_A Putative acetyl-COA ace 100.0 1.4E-36 4.7E-41 299.4 22.6 270 92-432 26-400 (401)
29 2wu9_A 3-ketoacyl-COA thiolase 100.0 8.9E-36 3E-40 295.2 22.5 272 92-433 55-420 (442)
30 2vu1_A Acetyl-COA acetyltransf 100.0 1.2E-35 4E-40 292.0 20.0 268 92-431 27-391 (392)
31 2iik_A 3-ketoacyl-COA thiolase 100.0 2.6E-34 8.7E-39 283.9 23.9 270 92-432 55-416 (418)
32 1afw_A 3-ketoacetyl-COA thiola 100.0 3.1E-34 1E-38 281.3 22.5 268 92-432 35-393 (393)
33 4dd5_A Acetyl-COA acetyltransf 100.0 1.2E-33 4.1E-38 277.8 24.9 270 92-431 31-396 (396)
34 3ss6_A Acetyl-COA acetyltransf 100.0 1.5E-33 5.1E-38 277.1 23.7 271 92-432 29-394 (394)
35 2ib8_A Acetyl-COA acetyltransf 100.0 1.4E-33 4.7E-38 277.6 21.5 243 92-379 32-372 (395)
36 3goa_A 3-ketoacyl-COA thiolase 100.0 2.4E-33 8.3E-38 274.6 22.0 272 92-432 27-387 (387)
37 4e1l_A Acetoacetyl-COA thiolas 100.0 8.7E-33 3E-37 271.8 25.3 270 92-431 29-395 (395)
38 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 1.7E-33 5.9E-38 270.0 15.1 293 24-431 2-319 (322)
39 3svk_A Acetyl-COA acetyltransf 100.0 6E-32 2E-36 265.9 19.8 271 92-431 32-406 (407)
40 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 3.9E-31 1.3E-35 252.2 15.8 289 23-430 2-308 (309)
41 1hnj_A Beta-ketoacyl-acyl carr 100.0 4.8E-31 1.6E-35 252.4 15.1 292 23-430 2-316 (317)
42 1mzj_A Beta-ketoacylsynthase I 100.0 8.6E-31 2.9E-35 252.8 13.3 296 21-431 9-331 (339)
43 1zow_A 3-oxoacyl-[acyl-carrier 100.0 1.9E-30 6.6E-35 247.8 12.7 247 90-430 49-310 (313)
44 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 8.4E-29 2.9E-33 238.7 14.2 296 21-431 10-332 (335)
45 2x3e_A 3-oxoacyl-[acyl-carrier 100.0 7.7E-28 2.6E-32 231.4 17.3 289 22-430 4-322 (331)
46 1u0m_A Putative polyketide syn 99.9 2.9E-28 1E-32 238.6 11.9 310 24-430 10-353 (382)
47 4egv_A Acetyl-COA acetyltransf 99.9 1.8E-28 6.2E-33 247.4 10.0 307 93-431 43-449 (520)
48 3tsy_A Fusion protein 4-coumar 99.9 6E-27 2E-31 256.2 12.5 330 19-430 599-972 (979)
49 2h84_A Steely1; thiolase-fold, 99.9 6.9E-26 2.3E-30 221.5 18.4 308 22-432 12-373 (374)
50 1ted_A PKS18; thiolase fold, s 99.9 5.3E-25 1.8E-29 216.3 17.3 253 91-432 112-391 (393)
51 3s21_A 3-oxoacyl-[ACP] synthas 99.9 8.2E-24 2.8E-28 204.2 22.4 314 18-430 7-344 (345)
52 4dfe_A 3-oxoacyl-[acyl-carrier 99.9 3.2E-23 1.1E-27 199.1 19.7 293 23-430 11-332 (333)
53 2d3m_A Pentaketide chromone sy 99.9 5E-21 1.7E-25 188.6 17.6 265 83-431 106-402 (406)
54 3led_A 3-oxoacyl-acyl carrier 99.9 1.6E-19 5.6E-24 176.2 27.0 246 91-431 116-391 (392)
55 3gwa_A 3-oxoacyl-(acyl-carrier 99.8 2.8E-19 9.6E-24 173.4 24.3 304 14-430 21-364 (365)
56 3il3_A 3-oxoacyl-[acyl-carrier 99.8 1.4E-18 4.7E-23 165.8 26.2 240 92-430 58-322 (323)
57 1xpm_A 3-hydroxy-3-methylgluta 99.8 4.7E-20 1.6E-24 180.9 15.8 265 23-375 2-290 (396)
58 1xes_A Dihydropinosylvin synth 99.8 2.3E-19 7.9E-24 176.8 18.5 264 87-431 120-409 (413)
59 3a5r_A Benzalacetone synthase; 99.8 1.8E-19 6.3E-24 176.4 17.1 264 83-431 89-382 (387)
60 1ee0_A 2-pyrone synthase; poly 99.8 2.7E-19 9.4E-24 175.8 17.5 321 20-430 18-390 (402)
61 3s3l_A CERJ; acyltransferase, 99.8 1.3E-18 4.6E-23 168.1 22.1 244 91-430 53-337 (357)
62 3h78_A PQS biosynthetic enzyme 99.8 2.3E-18 7.9E-23 166.4 19.5 245 92-430 74-350 (359)
63 4ewp_A 3-oxoacyl-[acyl-carrier 99.8 4.9E-18 1.7E-22 164.2 21.6 246 92-430 62-348 (350)
64 1i88_A CHS2, chalcone synthase 99.8 7.3E-19 2.5E-23 172.2 16.0 263 84-431 94-386 (389)
65 3awk_A Chalcone synthase-like 99.8 1.4E-18 4.8E-23 170.7 18.0 259 89-432 112-400 (402)
66 2p0u_A Stilbenecarboxylate syn 99.8 1.5E-18 5.1E-23 171.0 18.0 262 89-431 117-404 (413)
67 3il6_A 3-oxoacyl-[acyl-carrier 99.8 1.5E-17 5.1E-22 158.6 23.7 293 22-430 3-320 (321)
68 3ov2_A Curcumin synthase; type 99.8 1.5E-18 5.1E-23 169.7 16.0 262 90-431 100-386 (393)
69 4efi_A 3-oxoacyl-(acyl-carrier 99.8 7.7E-18 2.6E-22 162.7 20.3 246 92-431 66-343 (354)
70 2f82_A HMG-COA synthase; HMGS1 99.8 8.8E-18 3E-22 167.1 21.1 231 22-337 2-259 (450)
71 3oit_A OS07G0271500 protein; t 99.8 7.4E-17 2.5E-21 157.3 23.8 261 89-432 93-382 (387)
72 3e1h_A PKSIIINC, putative unch 99.7 5.3E-16 1.8E-20 153.8 26.0 261 93-431 111-407 (465)
73 3euo_A Type III pentaketide sy 99.7 5.2E-16 1.8E-20 151.0 22.0 263 91-431 80-378 (379)
74 3v4n_A HMG-COA synthase; hydro 99.7 6.2E-16 2.1E-20 150.6 14.0 264 22-374 6-294 (388)
75 3v7i_A Putative polyketide syn 99.6 2.8E-14 9.5E-19 139.6 23.2 241 91-430 136-411 (413)
76 3sqz_A Putative hydroxymethylg 99.6 2.4E-15 8.1E-20 147.6 15.0 260 22-374 35-324 (425)
77 3lma_A Stage V sporulation pro 99.6 1.6E-14 5.3E-19 135.4 17.6 188 92-344 55-248 (347)
78 2p8u_A Hydroxymethylglutaryl-C 99.6 1.5E-14 5.2E-19 144.3 18.5 226 22-334 23-282 (478)
79 2v4w_A Hydroxymethylglutaryl-C 99.6 3.7E-14 1.3E-18 139.5 17.7 222 22-330 4-259 (460)
80 2wya_A Hydroxymethylglutaryl-C 99.4 2E-12 6.9E-17 128.9 13.4 221 22-329 4-258 (460)
81 4e1l_A Acetoacetyl-COA thiolas 89.0 1.5 5E-05 42.1 9.2 100 276-381 7-109 (395)
82 4dd5_A Acetyl-COA acetyltransf 88.2 1.7 5.8E-05 41.7 9.0 100 276-381 9-111 (396)
83 3goa_A 3-ketoacyl-COA thiolase 86.1 3.1 0.00011 39.7 9.5 100 276-381 4-109 (387)
84 3ss6_A Acetyl-COA acetyltransf 85.5 2.4 8.2E-05 40.6 8.4 100 276-381 7-109 (394)
85 3s21_A 3-oxoacyl-[ACP] synthas 84.0 2.2 7.6E-05 40.0 7.3 78 298-381 70-148 (345)
86 4dfe_A 3-oxoacyl-[acyl-carrier 83.2 2.1 7.2E-05 39.9 6.7 78 298-381 67-145 (333)
87 1ulq_A Putative acetyl-COA ace 81.2 6.1 0.00021 37.8 9.3 100 276-381 4-107 (401)
88 4efi_A 3-oxoacyl-(acyl-carrier 80.8 2.9 0.0001 39.3 6.7 78 298-381 68-146 (354)
89 2ib8_A Acetyl-COA acetyltransf 80.5 5.7 0.0002 37.9 8.8 99 276-381 10-112 (395)
90 3svk_A Acetyl-COA acetyltransf 79.6 2.4 8.2E-05 40.8 5.8 100 276-381 9-114 (407)
91 3gwa_A 3-oxoacyl-(acyl-carrier 79.4 3 0.0001 39.5 6.3 78 298-381 82-160 (365)
92 2iik_A 3-ketoacyl-COA thiolase 79.3 7.7 0.00026 37.4 9.3 78 298-381 57-135 (418)
93 3il6_A 3-oxoacyl-[acyl-carrier 79.0 3.9 0.00013 37.8 6.9 77 298-381 54-131 (321)
94 3h78_A PQS biosynthetic enzyme 78.5 4.8 0.00016 38.0 7.4 78 297-381 75-153 (359)
95 2vu1_A Acetyl-COA acetyltransf 78.5 7.3 0.00025 37.1 8.8 100 276-381 5-107 (392)
96 3il3_A 3-oxoacyl-[acyl-carrier 78.5 4.5 0.00015 37.5 7.1 77 298-381 60-137 (323)
97 2h84_A Steely1; thiolase-fold, 78.4 2.7 9.3E-05 39.8 5.7 78 299-381 98-175 (374)
98 1u0m_A Putative polyketide syn 76.9 4.2 0.00014 38.6 6.6 78 299-381 87-164 (382)
99 3awk_A Chalcone synthase-like 76.8 3.8 0.00013 39.3 6.3 77 299-381 118-195 (402)
100 4ewp_A 3-oxoacyl-[acyl-carrier 76.4 4.7 0.00016 37.7 6.7 74 299-380 65-140 (350)
101 1ted_A PKS18; thiolase fold, s 76.3 2.7 9.3E-05 40.1 5.1 77 300-381 117-193 (393)
102 3v7i_A Putative polyketide syn 76.3 4.2 0.00014 39.2 6.4 77 300-381 141-217 (413)
103 1wl4_A Acetyl-coenzyme A acety 76.1 9.5 0.00033 36.4 8.9 100 276-381 8-110 (397)
104 1i88_A CHS2, chalcone synthase 76.0 4 0.00014 38.9 6.2 77 299-381 105-182 (389)
105 3lma_A Stage V sporulation pro 75.8 3.5 0.00012 38.4 5.5 70 300-381 59-128 (347)
106 3oit_A OS07G0271500 protein; t 75.1 2.6 8.9E-05 40.2 4.5 77 300-381 100-176 (387)
107 3euo_A Type III pentaketide sy 74.5 3.8 0.00013 38.9 5.6 76 299-379 84-159 (379)
108 3ov2_A Curcumin synthase; type 74.2 2.6 8.9E-05 40.3 4.3 77 300-381 106-182 (393)
109 2p0u_A Stilbenecarboxylate syn 73.2 4.8 0.00016 38.7 6.0 77 299-381 123-200 (413)
110 3led_A 3-oxoacyl-acyl carrier 72.7 5.4 0.00019 38.1 6.1 76 298-381 119-195 (392)
111 1zow_A 3-oxoacyl-[acyl-carrier 72.1 7.7 0.00026 35.5 6.9 78 297-381 52-130 (313)
112 1wdk_C 3-ketoacyl-COA thiolase 72.1 9.8 0.00034 36.2 7.8 100 276-381 7-112 (390)
113 2ebd_A 3-oxoacyl-[acyl-carrier 71.8 7.8 0.00027 35.3 6.9 78 297-381 51-129 (309)
114 1ee0_A 2-pyrone synthase; poly 71.6 5.5 0.00019 38.2 5.9 77 299-381 110-187 (402)
115 2wu9_A 3-ketoacyl-COA thiolase 71.4 16 0.00056 35.3 9.3 98 276-381 32-136 (442)
116 2d3m_A Pentaketide chromone sy 71.0 4.6 0.00016 38.8 5.2 77 299-381 118-195 (406)
117 1hnj_A Beta-ketoacyl-acyl carr 70.4 9.1 0.00031 35.0 7.0 78 297-381 52-130 (317)
118 1xes_A Dihydropinosylvin synth 70.0 5 0.00017 38.6 5.3 77 299-381 128-205 (413)
119 1afw_A 3-ketoacetyl-COA thiola 69.3 20 0.00069 34.0 9.3 100 276-381 12-119 (393)
120 3a5r_A Benzalacetone synthase; 68.7 5.3 0.00018 38.0 5.1 77 299-381 101-178 (387)
121 1mzj_A Beta-ketoacylsynthase I 68.3 9.6 0.00033 35.4 6.7 78 297-381 61-139 (339)
122 2f82_A HMG-COA synthase; HMGS1 67.9 9.7 0.00033 37.0 6.9 79 298-382 54-135 (450)
123 1u6e_A 3-oxoacyl-[acyl-carrier 67.5 10 0.00035 34.9 6.8 78 297-381 62-140 (335)
124 3e1h_A PKSIIINC, putative unch 67.3 6.8 0.00023 38.4 5.6 75 299-378 113-187 (465)
125 3s3l_A CERJ; acyltransferase, 66.5 18 0.00063 33.8 8.3 78 298-382 56-135 (357)
126 1ub7_A 3-oxoacyl-[acyl-carrier 65.0 10 0.00036 34.7 6.2 77 297-381 51-128 (322)
127 2p8u_A Hydroxymethylglutaryl-C 60.1 11 0.00039 36.9 5.7 78 298-381 75-155 (478)
128 2v4w_A Hydroxymethylglutaryl-C 56.3 13 0.00044 36.2 5.3 80 298-381 56-136 (460)
129 3o04_A LMO2201 protein, beta-k 51.1 37 0.0013 32.4 7.6 25 295-319 73-97 (413)
130 2wya_A Hydroxymethylglutaryl-C 49.3 16 0.00055 35.6 4.7 30 299-329 57-86 (460)
131 3tsy_A Fusion protein 4-coumar 48.6 19 0.00064 38.8 5.6 76 300-381 693-769 (979)
132 3ho9_A 3-oxoacyl-[acyl-carrier 45.1 29 0.001 33.3 5.9 25 295-319 87-111 (427)
133 2ivn_A O-sialoglycoprotein end 42.3 23 0.00079 32.7 4.4 30 299-328 50-80 (330)
134 3qbx_A Anhydro-N-acetylmuramic 38.6 21 0.00073 33.5 3.5 26 300-325 70-95 (371)
135 4egv_A Acetyl-COA acetyltransf 36.9 9.1 0.00031 38.0 0.7 99 277-381 21-133 (520)
136 2gqd_A 3-oxoacyl-[acyl-carrier 36.7 1.2E+02 0.0041 29.0 8.8 26 294-319 96-121 (437)
137 3kzu_A 3-oxoacyl-(acyl-carrier 34.7 1.4E+02 0.0047 28.5 8.8 25 295-319 86-111 (428)
138 3eno_A Putative O-sialoglycopr 33.8 24 0.00081 32.7 3.0 30 299-328 55-85 (334)
139 1e5m_A KAS II, beta ketoacyl a 33.7 1.4E+02 0.0046 28.3 8.5 22 298-319 79-100 (416)
140 3cqy_A Anhydro-N-acetylmuramic 32.6 23 0.00079 33.3 2.7 26 300-325 74-99 (370)
141 3ven_A O-carbamoyltransferase 32.2 19 0.00064 36.1 2.1 24 301-324 53-76 (576)
142 2gel_A Putative GRAM negative 31.6 55 0.0019 28.4 4.9 65 297-362 35-100 (231)
143 1tqy_B Actinorhodin polyketide 31.4 1.1E+02 0.0039 28.8 7.6 26 294-319 77-102 (415)
144 1ox0_A Beta ketoacyl-acyl carr 30.0 1.4E+02 0.0048 28.4 8.0 26 294-319 91-116 (430)
145 2x3e_A 3-oxoacyl-[acyl-carrier 29.5 67 0.0023 29.3 5.4 76 297-381 54-130 (331)
146 4ddo_A 3-oxoacyl-[acyl-carrier 29.2 90 0.0031 30.0 6.5 22 297-318 103-124 (451)
147 1j3n_A 3-oxoacyl-(acyl-carrier 28.3 1.2E+02 0.0041 28.6 7.1 25 295-319 70-94 (408)
148 2gel_A Putative GRAM negative 26.3 1E+02 0.0035 26.6 5.7 34 94-134 36-69 (231)
149 1tqy_A Beta-ketoacyl synthase/ 25.6 90 0.0031 29.7 5.7 23 297-319 74-96 (424)
150 2iwz_A 3-oxoacyl-[acyl-carrier 25.0 1.4E+02 0.0047 28.6 6.9 22 360-381 185-206 (438)
151 3mqd_A Beta-ketoacyl synthase; 23.2 90 0.0031 29.8 5.1 25 295-319 91-115 (428)
152 3r6m_A YEAZ, resuscitation pro 22.7 1.1E+02 0.0037 26.2 5.0 34 94-134 37-70 (213)
153 2w6k_A COBE; biosynthetic prot 20.9 1.6E+02 0.0056 23.3 5.4 58 276-344 11-68 (145)
154 3v4n_A HMG-COA synthase; hydro 20.7 36 0.0012 32.2 1.7 74 299-380 59-133 (388)
155 3r6m_A YEAZ, resuscitation pro 20.6 73 0.0025 27.3 3.5 65 297-362 36-101 (213)
156 3sqz_A Putative hydroxymethylg 20.5 33 0.0011 33.0 1.3 74 299-380 88-162 (425)
No 1
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=4.4e-82 Score=628.98 Aligned_cols=422 Identities=44% Similarity=0.730 Sum_probs=383.9
Q ss_pred CCcccccCCCCCCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhh
Q 013946 7 PDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS 86 (433)
Q Consensus 7 ~~~~~~~~~~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~ 86 (433)
..++.+....+...+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++||+.+||++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~ 82 (427)
T 3ho9_A 3 GSHHHHHHGSACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQ 82 (427)
T ss_dssp --------------CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHH
T ss_pred CcCCCccccCCCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHH
Confidence 34555555666677789999999999999999999999999999999999999988888899999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHH
Q 013946 87 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSA 165 (433)
Q Consensus 87 ~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~ 165 (433)
++|||+++|+++++++||+|||++++ +++..++||++|++.+++...++++..+ ..+...++|+.++....+..++
T Consensus 83 ~~~d~~~~l~l~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (427)
T 3ho9_A 83 RKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAG 159 (427)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHH
Confidence 99999999999999999999999987 4567899999999999988887777665 4567788999999999999999
Q ss_pred HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 166 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 166 ~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
+|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|.+.++..+..|...+.++..+..|+..|+|||.
T Consensus 160 ~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 239 (427)
T 3ho9_A 160 HLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDK 239 (427)
T ss_dssp HHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBT
T ss_pred HHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccC
Confidence 99999999999999999999999999999999999999999999999998999999999999998777667788999999
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+||
T Consensus 240 ~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hg 319 (427)
T 3ho9_A 240 ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHG 319 (427)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCC
T ss_pred CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 326 TSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
|||+.+|..|..++.++|+.. .++++++.|+++||++||||++++++++++|++++|||++|+++|+|.++++++. .+
T Consensus 320 tgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~ 398 (427)
T 3ho9_A 320 TSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP-HE 398 (427)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCB-SS
T ss_pred CcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccc-cc
Confidence 999999999999999999864 4689999999999999999999999999999999999999999999999988654 34
Q ss_pred cccc-CccEEEEecccccceeeeeEEccC
Q 013946 405 KERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 405 ~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+++ +++++++|||||||+|+|+||++|
T Consensus 399 ~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 399 ARQVSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp CEECSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred cccCCCCCEEEEeCccCCceeEEEEEEeC
Confidence 5666 789999999999999999999987
No 2
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=100.00 E-value=3.4e-81 Score=620.17 Aligned_cols=405 Identities=32% Similarity=0.494 Sum_probs=377.8
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCC-CCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT-SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
.|++|+|||||+++|.|.+.++||++|++|++++++++.|+.. .++.++.+.+++||+.+|+++++.++|||+++|+++
T Consensus 4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 83 (412)
T 4ewg_A 4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR 83 (412)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence 3579999999999999999999999999999999999888766 677888899999999999999999999999999999
Q ss_pred HHHHHHHhCCC-CcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCC
Q 013946 99 AGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 176 (433)
Q Consensus 99 aa~~Al~dAgl-~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 176 (433)
++++||+|||+ +++ +++..++||++|++.+++...+++...+ ..+....+|+.++....+..+.++++.||++||
T Consensus 84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 160 (412)
T 4ewg_A 84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR 160 (412)
T ss_dssp HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence 99999999999 665 5567899999999999999888888776 456677889988999999999999999999999
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccce
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGa 256 (433)
+++|+++|+|++.||..|+++|++|+||++||||+|. +++.....|...+.++....+|+..|||||.+++|+++||||
T Consensus 161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGA 239 (412)
T 4ewg_A 161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA 239 (412)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEE
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeE
Confidence 9999999999999999999999999999999999999 889889999999999887777889999999999999999999
Q ss_pred eEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHH
Q 013946 257 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 336 (433)
Q Consensus 257 aalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~ 336 (433)
+++||+++++|+++|++||++|+|++.++|+++.+.| ++.++.+++++||+++|++++||||||+|||||+.+|..|.
T Consensus 240 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~ 317 (412)
T 4ewg_A 240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAES 317 (412)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHH
T ss_pred EEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHH
Confidence 9999999999999999999999999999999887654 68899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC-CCccccCCcccccCccEEEE
Q 013946 337 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALS 415 (433)
Q Consensus 337 ~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 415 (433)
++|.++|+.. +++++.|+++||++||||++++++++++|+++++||++|+++|+|.+ +++++. .+.++++++++++
T Consensus 318 ~al~~~~~~~--~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~-~~~~~~~~~~~~~ 394 (412)
T 4ewg_A 318 QATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIR-GEARAIDAEYVMS 394 (412)
T ss_dssp HHHHHHHCTT--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECC-SSCEECCCSEEEE
T ss_pred HHHHHHcCCC--CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccccc-CcccCCCCCEEEE
Confidence 9999999865 89999999999999999999999999999999999999999999999 777643 3566778999999
Q ss_pred ecccccceeeeeEEccCC
Q 013946 416 NSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~~ 433 (433)
|||||||+|+|+||++|+
T Consensus 395 ~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 395 NNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp EEEEGGGEEEEEEEECCC
T ss_pred eeecCCcceEEEEEeeCC
Confidence 999999999999999985
No 3
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=3.3e-81 Score=621.03 Aligned_cols=411 Identities=45% Similarity=0.766 Sum_probs=381.0
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
+.|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+.+++||+.+++++++.++|||+++|+++
T Consensus 4 ~~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~ 83 (416)
T 1e5m_A 4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVC 83 (416)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence 44578999999999999999999999999999999999999888888888899999999888999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 177 (433)
++++||+|||++++ +++.+|+|||+|++.+++...++++..+ ..+...++|+.++....+..+.++++.||++||+
T Consensus 84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 160 (416)
T 1e5m_A 84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN 160 (416)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence 99999999999986 4567899999999999887777766555 4566778899888888999999999999999999
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|+||++||||+|..+++..+.+|..++.++.++++|+..|||||.+++|+++||||+
T Consensus 161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaa 240 (416)
T 1e5m_A 161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEE
T ss_pred eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEE
Confidence 99999999999999999999999999999999999888899889999999998777778889999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||+++++|+++|++||++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++++||||||+|+|||+.+|.+|.+
T Consensus 241 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~ 320 (416)
T 1e5m_A 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETR 320 (416)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHH
Confidence 99999999999999999999999999999999888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEe
Q 013946 338 ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 338 al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
+|.++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.++++++. .+.++++++++++|
T Consensus 321 al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~ 399 (416)
T 1e5m_A 321 AIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSN 399 (416)
T ss_dssp HHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEE
T ss_pred HHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CccccCCCCEEEEc
Confidence 999999864 3589999999999999999999999999999999999999999999999888644 34667789999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+|+||++|+
T Consensus 400 sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 400 SFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred cccCCCeeEEEEEEeCC
Confidence 99999999999999985
No 4
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-80 Score=616.08 Aligned_cols=410 Identities=42% Similarity=0.748 Sum_probs=383.6
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
|++++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+++++||+.+|+++++.++|||+++|+++
T Consensus 1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 80 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIA 80 (413)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence 45679999999999999999999999999999999999999888888888999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 177 (433)
++++||+|||++++ +++..|+|||+|++.+++..++.++..+ ..+....+|+.++....+..+.++++.||++||+
T Consensus 81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 157 (413)
T 3o04_A 81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN 157 (413)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence 99999999999987 5567899999999999998888877766 4566778899999999999999999999999999
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...+.++. ..+|++.|+|||.+++|+++||||+
T Consensus 158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~g~~~gdGAa 236 (413)
T 3o04_A 158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL-NPDPETACRPFDKDRDGFIIGEGAG 236 (413)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSCCTTBTTCCSBCBBCEEE
T ss_pred eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC-CCCCCCCcCCCcCCCCCceEeccEE
Confidence 999999999999999999999999999999999999999999999999999985 4457889999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||++.++|+++|.++|++|+|++.++|+.+...+.|.+.++.++++++|+++|++++||||||+|||||+.+|..|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~ 316 (413)
T 3o04_A 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQ 316 (413)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHH
T ss_pred EEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEe
Q 013946 338 ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 338 al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (433)
+|.++|+.. .++++++.|+++||++||||++++++++++|+++++||++|+++|+|.+++++++. +.+..+++++++|
T Consensus 317 al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 395 (413)
T 3o04_A 317 AIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPN-EAREANVNVVISN 395 (413)
T ss_dssp HHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBS-SCEECCCCEEEEE
T ss_pred HHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCC-cccCCCCCEEEEe
Confidence 999999864 46899999999999999999999999999999999999999999999999886543 4566778999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+|+||++|+
T Consensus 396 sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 396 SFGFGGHNATLVFKRIE 412 (413)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred CccCCceEEEEEEEeCC
Confidence 99999999999999984
No 5
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-80 Score=615.07 Aligned_cols=407 Identities=42% Similarity=0.735 Sum_probs=377.7
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+.+++||+.+++++++.++|||+++|++++++
T Consensus 28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 107 (437)
T 2gqd_A 28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAR 107 (437)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999888888888899999998888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ +++.+|++||+|++.+++..+++.+..+ ..+...++|+.++....+..+.++++.||++||+++|
T Consensus 108 ~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v 184 (437)
T 2gqd_A 108 EAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGAT 184 (437)
T ss_dssp HHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEECB
T ss_pred HHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEEe
Confidence 99999999986 4567899999999999887777666555 4566778898888888899999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|+||++||||+|.++++..+.+|..++.++. +.+|+..|+|||.+++|+++||||+++|
T Consensus 185 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~G~v~geGaaavv 263 (437)
T 2gqd_A 185 VTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILV 263 (437)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSSCTTCTTCCSBCBBCEEEEEE
T ss_pred cCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC-CCCCccccCCCCCCCCCceeeceEEEEE
Confidence 999999999999999999999999999999999888998899999998876 3447889999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|++.++|+++|+++|++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++|+||||||+|+|||+.+|.+|.++|.
T Consensus 264 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~ 343 (437)
T 2gqd_A 264 IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIK 343 (437)
T ss_dssp EEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHH
Confidence 99999999999999999999999999999888888889999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.++++++++++||||
T Consensus 344 ~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~sfG 422 (437)
T 2gqd_A 344 NTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP-NEAQDLDITYAMSNSLG 422 (437)
T ss_dssp HHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCB-SSCEECCCSEEEEEEEC
T ss_pred HHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC-CccccCCCCEEEEccCc
Confidence 999863 4689999999999999999999999999999999999999999999999988644 34667789999999999
Q ss_pred ccceeeeeEEccCC
Q 013946 420 FGGHNSSIIFSPYK 433 (433)
Q Consensus 420 ~gG~n~~~vl~~~~ 433 (433)
|||+|+|+||++|+
T Consensus 423 fGG~na~~vl~~~~ 436 (437)
T 2gqd_A 423 FGGHNAVLVFKKFE 436 (437)
T ss_dssp GGGEEEEEEEECCC
T ss_pred CCCeeEEEEEEecc
Confidence 99999999999984
No 6
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=7.9e-80 Score=612.15 Aligned_cols=412 Identities=43% Similarity=0.708 Sum_probs=380.2
Q ss_pred CCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-------CCCCCCCCChhhhhcCC
Q 013946 18 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-------SFSTDGWVAPKLSKRMD 90 (433)
Q Consensus 18 ~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~~~i~~~~~~~~~ 90 (433)
...+++|||||||+++|.|.++++||++|++|+++++++++|+...++..+++.++ +||+.+||++++.++||
T Consensus 6 ~~~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d 85 (428)
T 3kzu_A 6 HHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVD 85 (428)
T ss_dssp ---CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSC
T ss_pred cccccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCC
Confidence 44578999999999999999999999999999999999999998888888888887 79998889999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
|+++|+++++++||+|||+++++ .++..++||++|++.+++...+++...+ ..+...++|+.++....+..+++|++
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~--~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 163 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPEN--DEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSI 163 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCS--HHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhh--hccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHH
Confidence 99999999999999999999863 0445789999999999988888777766 45667889999999999999999999
Q ss_pred HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCC
Q 013946 170 DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRD 248 (433)
Q Consensus 170 ~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~ 248 (433)
.||++||+++|+++|+|++.||..|+++|++|+||++||+|+|.++++..+..|...+.++.. ...|...|+|||.+++
T Consensus 164 ~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 243 (428)
T 3kzu_A 164 KHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRD 243 (428)
T ss_dssp HHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCC
T ss_pred HcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999865 3456678999999999
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATST 328 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt 328 (433)
|+++||||+++||++.++|+++|++||++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|||||
T Consensus 244 G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT 323 (428)
T 3kzu_A 244 GFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST 323 (428)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS
T ss_pred ceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc
Confidence 99999999999999999999999999999999999999999988988999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccc
Q 013946 329 PAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 407 (433)
Q Consensus 329 ~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 407 (433)
.+|..|.+++.++|+.. .++++++.|+++||++||+|++++++++++|+++++||++|+++|+|.++++++.. +.++
T Consensus 324 -~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~ 401 (428)
T 3kzu_A 324 -MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPH-KPRE 401 (428)
T ss_dssp -TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBS-SCEE
T ss_pred -hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCC-CCcC
Confidence 99999999999999864 36899999999999999999999999999999999999999999999999887543 4566
Q ss_pred cCccEEEEecccccceeeeeEEccCC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
++++++++|||||||+|+|+||++|+
T Consensus 402 ~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 402 RKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCCEEEEeCcccChhhEEEEEeecC
Confidence 78999999999999999999999984
No 7
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=2.9e-80 Score=613.38 Aligned_cols=405 Identities=47% Similarity=0.800 Sum_probs=378.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+++ +||+.+++++++.++|||+++|++++++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa~ 80 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAAQ 80 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998888888888888 8998888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v 180 (433)
+||+|||++++ +++..++||++|++.+++..+++++..+ ..+...++|+.++....+..+.++++.||++||+++|
T Consensus 81 ~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v 157 (408)
T 1j3n_A 81 LALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV 157 (408)
T ss_dssp HHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCB
T ss_pred HHHHHcCCCcc---ccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCc
Confidence 99999999987 4556899999999999888777766655 4566778898888888999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++.++..|+..|+|||.+++|+++||||+++|
T Consensus 158 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaavv 237 (408)
T 1j3n_A 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237 (408)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEEE
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEEEE
Confidence 99999999999999999999999999999999988999999999999999777777889999999999999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHH
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 340 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~ 340 (433)
|++.++|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|+|||+.+|.+|.+++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~ 317 (408)
T 1j3n_A 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIK 317 (408)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred EeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHH
Confidence 99999999999999999999999999999888888999999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEeccc
Q 013946 341 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 419 (433)
Q Consensus 341 ~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g 419 (433)
++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.++++++. +.++++++++++||||
T Consensus 318 ~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~--~~~~~~~~~a~~~sfG 395 (408)
T 1j3n_A 318 RVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFA 395 (408)
T ss_dssp HHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEEC
T ss_pred HHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC--CCcCCCCCEEEEeccc
Confidence 999753 4689999999999999999999999999999999999999999999999988754 5677789999999999
Q ss_pred ccceeeeeEEccC
Q 013946 420 FGGHNSSIIFSPY 432 (433)
Q Consensus 420 ~gG~n~~~vl~~~ 432 (433)
|||+|+|+||++|
T Consensus 396 fGG~na~~vl~~~ 408 (408)
T 1j3n_A 396 FGGHNAVLAFKRV 408 (408)
T ss_dssp TTSEEEEEEEECC
T ss_pred CCcceEEEEEecC
Confidence 9999999999986
No 8
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=100.00 E-value=1.3e-79 Score=612.24 Aligned_cols=407 Identities=39% Similarity=0.637 Sum_probs=374.8
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccC------CCCCCCCChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS------FSTDGWVAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~------~~~~~~i~~~~~~~~~~~~~ 94 (433)
.++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++ ||+.+|+++++.++|||+++
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~ 99 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI 99 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence 368999999999999999999999999999999999988877788888888877 99888899999999999999
Q ss_pred HHHHHHHHHHHhCCCCc-ccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 95 YLLTAGKKALADGGITE-DVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~-~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
|+++++++||+|||+++ ++ ++..++||++|++.+++..+++++..+ ..+...++|+.++....+..+.++++.||
T Consensus 100 l~l~aa~~AL~dAGl~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 100 MAIGAAELAMKDSGWHPQSE---ADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHTCCCCSH---HHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCccc---ccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 99999999999999987 63 345789999999999888777776665 45567788888888888999999999999
Q ss_pred CCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccc
Q 013946 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 252 (433)
Q Consensus 173 l~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ 252 (433)
++||+++|+++|+|++.||..|+++|++|+||++||||+|.+++|..+..|..++.++.. .+|+..|+|||.+++|+++
T Consensus 177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN-SDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-SCTTTSCCTTCTTCCSBCB
T ss_pred CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC-CCCCcccccCCCCCCCEEe
Confidence 999999999999999999999999999999999999999988889888899999988754 3477899999999999999
Q ss_pred ccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC
Q 013946 253 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332 (433)
Q Consensus 253 geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D 332 (433)
||||+++||+++++|+++|++||++|+|++.++|+.+.+.|.+++.++.++|++||+++|++++||||||+|+|||+.+|
T Consensus 256 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD 335 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGD 335 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH
T ss_pred eceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccC
Confidence 99999999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccC--
Q 013946 333 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE-- 409 (433)
Q Consensus 333 ~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~-- 409 (433)
.+|.++|.++|+.. .+++|+++|+++||+++|||++++++++++|+++.+||++|+++|+|.++++++. .+.++|+
T Consensus 336 ~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~ 414 (438)
T 2iwz_A 336 AAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP-LKAQEWKTE 414 (438)
T ss_dssp HHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB-SSCEECCCS
T ss_pred HHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCcccCCCC
Confidence 99999999999864 3689999999999999999999999999999999999999999999999988644 3456666
Q ss_pred -ccEEEEecccccceeeeeEEccC
Q 013946 410 -VKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 410 -~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++++++|||||||+|+|+||++|
T Consensus 415 ~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 415 KRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp SSCEEEEEEEETTTEEEEEEEECC
T ss_pred CccEEEEecCcCCCeeEEEEEeeC
Confidence 89999999999999999999986
No 9
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=100.00 E-value=5.9e-79 Score=607.02 Aligned_cols=408 Identities=44% Similarity=0.704 Sum_probs=377.4
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 98 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~ 98 (433)
|+|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.+.+++||+.+++++++.++|||+++|+++
T Consensus 20 m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~ 99 (430)
T 1ox0_A 20 MKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALY 99 (430)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHHH
T ss_pred ccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHHH
Confidence 44678999999999999999999999999999999999999888888888899999998878999999999999999999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 177 (433)
++++||+|||++++ +++..++||++|++.+++....+++..+ ..+.+.++|+.++....+..+.+|++.||++||+
T Consensus 100 aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~ 176 (430)
T 1ox0_A 100 AAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVC 176 (430)
T ss_dssp HHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCce
Confidence 99999999999886 4567899999999999887777666555 4566788899999999999999999999999999
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|++|++||||+|..++|..+..|..++.++. .++|+..|+|||.+++|+++||||+
T Consensus 177 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~-~~~p~~~~~pFd~~~~g~~~geGAa 255 (430)
T 1ox0_A 177 KSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST-TEDPTRASIPFDKDRNGFVMGEGSG 255 (430)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CSSTTSSSCTTBTTCCSBCBCCEEE
T ss_pred EeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC-CCCCCCCCCCCCCCCCCccccceEE
Confidence 999999999999999999999999999999999999888988888988888875 3447889999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||+++++|+++|++||++|+|++.++|+.+.+.|.+++.++.++|+++|+++|++++||||||+|+|||+.+|..|..
T Consensus 256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 335 (430)
T 1ox0_A 256 MLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESG 335 (430)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEec
Q 013946 338 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNS 417 (433)
Q Consensus 338 al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 417 (433)
++.++|+. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.++++++++++||
T Consensus 336 al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~s 412 (430)
T 1ox0_A 336 AIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLEKEIPYAISNT 412 (430)
T ss_dssp HHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEECCCSEEEEEE
T ss_pred HHHHHhCC--CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CCCcCCCCCEEEEeC
Confidence 99999986 489999999999999999999999999999999999999999999999887643 345566789999999
Q ss_pred ccccceeeeeEEccCC
Q 013946 418 FGFGGHNSSIIFSPYK 433 (433)
Q Consensus 418 ~g~gG~n~~~vl~~~~ 433 (433)
|||||+|+|+||++|.
T Consensus 413 fGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 413 FGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EETTTEEEEEEEECCC
T ss_pred ccCCCceEEEEEeecC
Confidence 9999999999999984
No 10
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=100.00 E-value=1.9e-79 Score=609.75 Aligned_cols=410 Identities=38% Similarity=0.582 Sum_probs=364.5
Q ss_pred cCCCCCCCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHH
Q 013946 13 TKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 13 ~~~~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~ 92 (433)
......+.+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+. .+||+.+|+++++.++||++
T Consensus 14 ~~~~~~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~ 92 (428)
T 3mqd_A 14 AQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRG 92 (428)
T ss_dssp --------CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHH
T ss_pred cCCCCCCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHH
Confidence 33344566789999999999999999999999999999999999887777777777777 47988888999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
++|+++++++||+|||++++ +++..++|||+|++.+++...+++...+ ..+...++|+.++....+..+.++++.|
T Consensus 93 ~~l~~~aa~~Al~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 169 (428)
T 3mqd_A 93 TAWNHIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFF 169 (428)
T ss_dssp HHHHHHHHHHHHHHHTCCHH---HHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCChh---HccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHc
Confidence 99999999999999999987 4557899999999988888777777665 4567788999999999999999999999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCCc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~ 250 (433)
|++||+++|+++|+|++.||..|+++|++|+||++||||+|. +++.....|..++.++.. ...|++.|+|||.+++|+
T Consensus 170 gl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~ 248 (428)
T 3mqd_A 170 KIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGF 248 (428)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSB
T ss_pred CCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCcccCCCCCc
Confidence 999999999999999999999999999999999999999999 455556668888888765 456788999999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~ 330 (433)
++||||+++||+++++|+++|++||++|+|++.++|+.+++.| ++.++.+++++||+ |++ +||||||+|||||+.
T Consensus 249 v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~ 323 (428)
T 3mqd_A 249 VIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDYINPHATSTPA 323 (428)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHH
T ss_pred ccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCC
Confidence 9999999999999999999999999999999999999887655 78899999999999 999 999999999999999
Q ss_pred CCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-CccccCCccccc
Q 013946 331 GDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKERL 408 (433)
Q Consensus 331 ~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~ 408 (433)
+|.+|..+|.++|+.. ..+++++.|+++||++||||++++++++++|++++|||++|+++|+|.++ ++++. ...+..
T Consensus 324 ~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~-~~~~~~ 402 (428)
T 3mqd_A 324 GDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR-KRIDNV 402 (428)
T ss_dssp HHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS-SCEESC
T ss_pred cCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC-CccccC
Confidence 9999999999999842 24789999999999999999999999999999999999999999999986 66543 223335
Q ss_pred CccEEEEecccccceeeeeEEccCC
Q 013946 409 EVKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 409 ~~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
+++++++|||||||+|+|+||++|+
T Consensus 403 ~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 403 QLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp CCCEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCEEEEecCcCCcceEEEEEeecC
Confidence 6899999999999999999999985
No 11
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=100.00 E-value=2.4e-79 Score=605.44 Aligned_cols=399 Identities=37% Similarity=0.620 Sum_probs=363.2
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++.++++ ||+.+|+++++.++|||+++|++++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa~ 80 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSME 80 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 6899999999999999999999999999999999988877777778888898 999888999999999999999999999
Q ss_pred HHHHhCCCCcccccccCC-CeeEEEEeccCCchHHHHHHHHHHH--hhcccCCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 102 KALADGGITEDVMNELDK-SKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~-~~~gv~~g~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
+||+|||++++ +++. +|+|||+|++.+++...++++..+. .+...++|+.++....+..+.++++.||++||++
T Consensus 81 ~Al~dAg~~~~---~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 157 (406)
T 2vba_A 81 QAIADAGLSPE---AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (406)
T ss_dssp HHHHHHTCCHH---HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHCCCChh---HcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCcee
Confidence 99999999876 4555 8999999999999888877776653 4455678888888889999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhc-CCCCCCCCCccccCCCCCccccccee
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ-RNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~-~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
+|+++|+|++.||..|+++|++|+||++||||+|.++.+..+. |..++.++. ++++|+..|+|||.+++|+++|||++
T Consensus 158 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaa 236 (406)
T 2vba_A 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (406)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceEeeceEE
Confidence 9999999999999999999999999999999999988887777 888888875 34457789999999999999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++|||++++|+++|++||++|+|++.++|+.+++. |++.++.++|++||+++| +||||||+|||||+.+|.+|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~--p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~ 311 (406)
T 2vba_A 237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVA--PSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELA 311 (406)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTS--CCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHH
T ss_pred EEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCC--CCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHH
Confidence 99999999999999999999999999999987764 458899999999999999 8999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-CccccCCcccccCccEEEEe
Q 013946 338 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKERLEVKAALSN 416 (433)
Q Consensus 338 al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 416 (433)
+|.++|+.. .+++++.|+++||+++|||++++++++++|+++.+||++|+++|+|.++ ++++.. ..+. ++|++++|
T Consensus 312 al~~~fg~~-~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~-~~~~-~~~~a~~~ 388 (406)
T 2vba_A 312 AIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTE-TTDR-ELTTVMSN 388 (406)
T ss_dssp HHHHHHTTC-CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCS-CEEC-CCCEEEEE
T ss_pred HHHHHhCcC-CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCc-ccCC-CCCEEEEc
Confidence 999999865 3889999999999999999999999999999999999999999999998 766433 2333 78999999
Q ss_pred cccccceeeeeEEccCC
Q 013946 417 SFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 417 s~g~gG~n~~~vl~~~~ 433 (433)
||||||+|+|+||++|+
T Consensus 389 sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 389 SFGFGGTNATLVMRKLK 405 (406)
T ss_dssp EEETTTEEEEEEEECC-
T ss_pred CCCCCCeEEEEEEEeCC
Confidence 99999999999999984
No 12
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-78 Score=601.17 Aligned_cols=406 Identities=33% Similarity=0.527 Sum_probs=373.4
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCC--CCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
...++|+|||||+++|.|.+.++||++|++|+++++++++|+ ...++.++++.+++ |+.+|+++++.++|||+++|+
T Consensus 25 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~ 103 (434)
T 2gp6_A 25 KAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMS 103 (434)
T ss_dssp TTSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHH
T ss_pred CCCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHH
Confidence 344689999999999999999999999999999999998876 45667778888877 777779999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCC
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 175 (433)
++++++||+|||++ +++.++++||+|++.+++...++++..+ ..+...++|+.++....+..+.+|++.||++|
T Consensus 104 l~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~G 178 (434)
T 2gp6_A 104 TVLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKA 178 (434)
T ss_dssp HHHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCC
Confidence 99999999999993 5667899999999999988877777666 34556788888888889999999999999999
Q ss_pred CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhh-hhhcCCCCCCCCCccccCCCCCccccc
Q 013946 176 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 176 p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~-~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
|+++|+++|+|++.||..|+++|++|++|++||||+|....+..+..|..++ .++..+..|++.|+|||.+++|+++||
T Consensus 179 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gd 258 (434)
T 2gp6_A 179 GVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGE 258 (434)
T ss_dssp CEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBC
T ss_pred CeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceec
Confidence 9999999999999999999999999999999999999988888888898888 777666668889999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 334 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~ 334 (433)
||+++||++.+.|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|+|+|+.+|.+
T Consensus 259 GAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~ 338 (434)
T 2gp6_A 259 GGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLA 338 (434)
T ss_dssp CEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHH
Confidence 99999999999999999999999999999999999888888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEE
Q 013946 335 EYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 414 (433)
Q Consensus 335 E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (433)
|.++|.++|+.. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++++|+++
T Consensus 339 E~~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~ 416 (434)
T 2gp6_A 339 EGRAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA-GEPRPGNYRYAI 416 (434)
T ss_dssp HHHHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECC-SSCCCSCCCEEE
T ss_pred HHHHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCccCCCCCEEE
Confidence 999999999865 689999999999999999999999999999999999999999999999887644 345667899999
Q ss_pred EecccccceeeeeEEccC
Q 013946 415 SNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 415 ~~s~g~gG~n~~~vl~~~ 432 (433)
+|||||||+|+|+||++|
T Consensus 417 ~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 417 NNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp EEEEETTTEEEEEEEECC
T ss_pred EeCCcCCCeeEEEEEEeC
Confidence 999999999999999987
No 13
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=5.6e-79 Score=605.19 Aligned_cols=404 Identities=25% Similarity=0.401 Sum_probs=372.6
Q ss_pred CCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 013946 20 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~a 99 (433)
..++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++||+.+|+++++.++|||+++|++++
T Consensus 7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~a 86 (415)
T 1tqy_B 7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTA 86 (415)
T ss_dssp ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHH
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHH
Confidence 34689999999999999999999999999999999999988878888888999999988789999999999999999999
Q ss_pred HHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCCCcc
Q 013946 100 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 178 (433)
Q Consensus 100 a~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 178 (433)
+++||+|||++++ +++..++|||+|++.+++...++++..+ ..+...++|+.++....+..+.++++.||++||++
T Consensus 87 a~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 163 (415)
T 1tqy_B 87 ADWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS 163 (415)
T ss_dssp HHHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence 9999999999987 4557899999999999998888777766 45667789998888889999999999999999999
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
+|+++|+|++.||..|+++|++| ||++||||+|..+++..+..|..++.++. +++|+..|+|||.+++|+++||||++
T Consensus 164 ~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~pfd~~~~G~~~geGaaa 241 (415)
T 1tqy_B 164 ALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST-ATDPDRAYLPFDERAAGYVPGEGGAI 241 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC-CSCGGGSCCTTSTTCCCBCBBCEEEE
T ss_pred eecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC-CCCCCCCcCCCCCCCCCcceeeeEEE
Confidence 99999999999999999999999 99999999999889999999999999886 44577899999999999999999999
Q ss_pred EEecchHHHHhcCC-eEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH
Q 013946 259 LLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 259 lvL~~~~~A~~~g~-~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
+||+++++|+++|+ ++|++|+|++.++|+.+.+.|.+ ++.++|+++|+++|++++||||||+|||||+.+|.+|..
T Consensus 242 vvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 318 (415)
T 1tqy_B 242 LVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEAR 318 (415)
T ss_dssp EEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHH
T ss_pred EEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHH
Confidence 99999999999999 99999999999999998777665 788999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEec
Q 013946 338 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNS 417 (433)
Q Consensus 338 al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 417 (433)
++.++|+.. .+++++.|+++||++||||++++++++++|+++.+||++|+++|+|.++++++. .+.+++.++++++||
T Consensus 319 al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~s 396 (415)
T 1tqy_B 319 AIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVL-GEPRSTAPRTALVLA 396 (415)
T ss_dssp HHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECB-SSCBCCCCSEEEEEE
T ss_pred HHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCccCCCCEEEEec
Confidence 999999865 489999999999999999999999999999999999999999999999887643 456777899999999
Q ss_pred ccccceeeeeEEccCC
Q 013946 418 FGFGGHNSSIIFSPYK 433 (433)
Q Consensus 418 ~g~gG~n~~~vl~~~~ 433 (433)
|||||+|+|+||++|.
T Consensus 397 fGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 397 RGRWGFNSAAVLRRFA 412 (415)
T ss_dssp EETTTEEEEEEEEEC-
T ss_pred CcCCCeEEEEEEecCC
Confidence 9999999999999873
No 14
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=2.1e-79 Score=609.86 Aligned_cols=406 Identities=33% Similarity=0.512 Sum_probs=371.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCC-CChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-i~~~~~~~~~~~~~l~l~aa 100 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+.+++ +||+.+| +++++.++|||+++|+++++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~aa 81 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVACA 81 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence 589999999999999999999999999999999999998888888888888 8998887 99999999999999999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHH---hhcccCCCCcccccccchHHH----HHHHHhCC
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR---ISYKKMNPFCVPFATTNMGSA----MLAMDLGW 173 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~----~ia~~lgl 173 (433)
++||+|||++++ +++..|+|||+|++.+++...++++..+. .+....+|+.++...++..+. ++++.||+
T Consensus 82 ~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl 158 (424)
T 1tqy_A 82 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA 158 (424)
T ss_dssp HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence 999999999986 45678999999999998887777766653 344556666666555554455 99999999
Q ss_pred CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccc
Q 013946 174 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 253 (433)
Q Consensus 174 ~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~g 253 (433)
+||+++|+++|+|++.||..|+++|++|+||++||||+|.++++..+..|..++.++.++.+|+..|||||.+++|+++|
T Consensus 159 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 238 (424)
T 1tqy_A 159 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLA 238 (424)
T ss_dssp CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCEE
T ss_pred CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceeee
Confidence 99999999999999999999999999999999999999998889988999999999877777889999999999999999
Q ss_pred cceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 254 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 254 eGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
||++++||++.++|+++|++||++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++++||||||+|+|||+.+|.
T Consensus 239 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~ 318 (424)
T 1tqy_A 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDR 318 (424)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred cceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCH
Confidence 99999999999999999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccE
Q 013946 334 KEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 412 (433)
Q Consensus 334 ~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (433)
+|.++|.++|+.. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++++++
T Consensus 319 ~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~ 397 (424)
T 1tqy_A 319 HETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP-LEARERKLRS 397 (424)
T ss_dssp HHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCB-SSCEECCCSE
T ss_pred HHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCC-CcccCCCCCE
Confidence 9999999999864 3588999999999999999999999999999999999999999999999887644 3466778999
Q ss_pred EEEecccccceeeeeEEccC
Q 013946 413 ALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 413 ~l~~s~g~gG~n~~~vl~~~ 432 (433)
+++|||||||+|+|+||++|
T Consensus 398 a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 398 VLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp EEEEEEETTTEEEEEEEECH
T ss_pred EEEccccCCceEEEEEEccC
Confidence 99999999999999999986
No 15
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=100.00 E-value=1.6e-78 Score=600.61 Aligned_cols=405 Identities=33% Similarity=0.550 Sum_probs=371.6
Q ss_pred CCCCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCC--CCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 19 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
..+++|+|||||+++|.|.+.++||++|++|+++++++++|+ ...++.++++.+++ |+.+|+++++.++|||+++|+
T Consensus 9 ~~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~ 87 (416)
T 2wge_A 9 GGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMG 87 (416)
T ss_dssp TSSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHH
T ss_pred CCCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHH
Confidence 345689999999999999999999999999999999998876 44567778888887 777779999999999999999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHhCCCC
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 175 (433)
++++++||+|||++ +++.+++|||+|++.+++...++++..+ ..+...++|+.++....+..+.+|++.||++|
T Consensus 88 l~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 162 (416)
T 2wge_A 88 KLLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARA 162 (416)
T ss_dssp HHHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCC
Confidence 99999999999992 5567899999999999888777776655 45667788988888889999999999999999
Q ss_pred CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccc
Q 013946 176 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 255 (433)
Q Consensus 176 p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geG 255 (433)
|+++|+++|+|++.||..|+++|++|++|++||||+|.+..+..+..|...+.++.++.+|+..|+|||.+++|+++|||
T Consensus 163 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geG 242 (416)
T 2wge_A 163 GVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEA 242 (416)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCE
T ss_pred CcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCc
Confidence 99999999999999999999999999999999999999888888888999999987777788999999999999999999
Q ss_pred eeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHH
Q 013946 256 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 335 (433)
Q Consensus 256 aaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E 335 (433)
++++||++.++|+++|.++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++||||||+|||||+.+|.+|
T Consensus 243 aaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E 322 (416)
T 2wge_A 243 GALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAE 322 (416)
T ss_dssp EEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHH
T ss_pred eEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHH
Confidence 99999999999999999999999999999999988888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEE
Q 013946 336 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 415 (433)
Q Consensus 336 ~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 415 (433)
..++..+ +.. ++++++.|+++||++||+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++++|++++
T Consensus 323 ~~al~~~-~~~-~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~ 399 (416)
T 2wge_A 323 ANAIRVA-GCD-QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVA-GEPRYGDYRYAVN 399 (416)
T ss_dssp HHHHHHT-TCT-TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECC-SSCEECCCCEEEE
T ss_pred HHHHHHh-ccC-CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC-CCCccCCCCEEEE
Confidence 9999988 543 589999999999999999999999999999999999999999999999887644 3445567899999
Q ss_pred ecccccceeeeeEEccC
Q 013946 416 NSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 416 ~s~g~gG~n~~~vl~~~ 432 (433)
|||||||+|+|+||++|
T Consensus 400 ~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 400 NSFGFGGHNVALAFGRY 416 (416)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred eCcccCceeEEEEEEeC
Confidence 99999999999999987
No 16
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=100.00 E-value=9.3e-79 Score=608.38 Aligned_cols=410 Identities=40% Similarity=0.665 Sum_probs=378.5
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc--------CCCCCCCCChhhhhcCCHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK--------SFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~~~~i~~~~~~~~~~~ 92 (433)
+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.++ +||+.+|+++++.+.|||+
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 102 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF 102 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence 47899999999999999999999999999999999988877777778888887 7998888999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccccchHHHHHHHHh
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
++|+++++++||+|||++++++. +..++||++|++.+++...++++..+ ..+...++|+.++....+..+.++++.|
T Consensus 103 ~~L~l~Aa~~AL~dAGl~~~~i~--d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 103 IQMAMVAADEALAEAGWAPEAEQ--QRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSHH--HHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChhhcc--cccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 99999999999999999987440 46789999999999998888887766 4566778999999999999999999999
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCCCCccccCCCCCc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~G~ 250 (433)
|++||+++|+++|+|++.||..|+++|++|+||++||+|+|.+..+..+..|...++++.. ..+|...|+|||.+++|+
T Consensus 181 gl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g~ 260 (451)
T 4ddo_A 181 RFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGF 260 (451)
T ss_dssp TCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSB
T ss_pred cCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999988865 445667899999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~ 330 (433)
++||||+++||++.++|+++|.+|+++|+|++.++|+.+...+.+++.++.++++++|+++|++++||||||+|+|||+.
T Consensus 261 v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~ 340 (451)
T 4ddo_A 261 VMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPV 340 (451)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCcc
Confidence 99999999999999999999999999999999999999988888889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC-CCccccCCcccccC
Q 013946 331 GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLE 409 (433)
Q Consensus 331 ~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~ 409 (433)
+|.+|..++.++|+...++++++.|+++||++||||++++++++++|+++++||++|+++|+|.+ +++++ ..+.++++
T Consensus 341 ~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~ 419 (451)
T 4ddo_A 341 GDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLI-GPAARHVP 419 (451)
T ss_dssp HHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEEC-CSSCEECC
T ss_pred cCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccccccccc-CCCCCCCC
Confidence 99999999999998755789999999999999999999999999999999999999999999998 66664 34456678
Q ss_pred ccEEEEecccccceeeeeEEccCC
Q 013946 410 VKAALSNSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 410 ~~~~l~~s~g~gG~n~~~vl~~~~ 433 (433)
++++++|||||||+|+|+||++|.
T Consensus 420 ~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 420 VEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp CSEEEEEEEETTTEEEEEEEEESC
T ss_pred cCEEEEeeEcCCCceEEEEEeeCC
Confidence 999999999999999999999973
No 17
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=100.00 E-value=1e-77 Score=597.98 Aligned_cols=404 Identities=41% Similarity=0.705 Sum_probs=364.5
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCC--------------CCCCcccccccc------CCCCCCCC
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTDGWV 81 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~--------------~~~~~~~~~~i~------~~~~~~~i 81 (433)
++|+|||||+++|.|.+.++||++|++|+++++++++|+. ..++.++++.++ +||+.+|+
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 3799999999999999999999999999999999987762 234556677776 68876667
Q ss_pred ChhhhhcCCHHHHHHHHHHHHHHHhCCC-CcccccccCCCeeEEEEeccCCchHHHHHHHHHH-HhhcccCCCCcccccc
Q 013946 82 APKLSKRMDKFMLYLLTAGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFAT 159 (433)
Q Consensus 82 ~~~~~~~~~~~~~l~l~aa~~Al~dAgl-~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 159 (433)
+++ +|||+++|+++++++||+|||+ ++++ ++..++|||+|++.+++..+++++..+ ..+.+.++|+.++...
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 154 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPTEE---EEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL 154 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCCSH---HHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCccc---cCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence 765 8999999999999999999999 8763 445789999999999888777766655 3455678888888888
Q ss_pred cchHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC-CCCCCC
Q 013946 160 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTK 238 (433)
Q Consensus 160 ~~~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~ 238 (433)
.+..+.++++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|.++++..+..|..++.++.. +.+|+.
T Consensus 155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 234 (431)
T 2ix4_A 155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQE 234 (431)
T ss_dssp TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGG
T ss_pred hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccc
Confidence 8999999999999999999999999999999999999999999999999999998888888889888888753 456788
Q ss_pred CCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 013946 239 ASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 239 ~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dI 318 (433)
.|+|||.+++|+++||||+++||++.++|+++|+++|++|+|++.++|+.+++.|.+++.++.++++++|+++|++++||
T Consensus 235 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 314 (431)
T 2ix4_A 235 ASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQI 314 (431)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999888888888999999999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcCC---CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~~---~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||||+|||||+.+|.+|.+++.++|+.. .++++++.|+++||+++|||++++++++++|+++.+||++|+++|+|.+
T Consensus 315 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~ 394 (431)
T 2ix4_A 315 DYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIF 394 (431)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTC
T ss_pred CEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 9999999999999999999999999742 3689999999999999999999999999999999999999999999999
Q ss_pred CCccccCCccccc-CccEEEEecccccceeeeeEEccC
Q 013946 396 DTNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 396 ~~~~~~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+++++. .+.+++ .+|++++|||||||+|+|+||++|
T Consensus 395 ~~~~v~-~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 395 DKRFMP-LTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp CSSSCC-CSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccCC-ccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 888644 345566 789999999999999999999987
No 18
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=100.00 E-value=1.2e-74 Score=621.50 Aligned_cols=394 Identities=26% Similarity=0.411 Sum_probs=351.0
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCC-CCCCCC-Cccccc---cccCCCCCCC-CChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIET-FDCTSF-PTKIAA---EIKSFSTDGW-VAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~-~~~~~~-~~~~~~---~i~~~~~~~~-i~~~~~~~~~~~~~ 94 (433)
+++|+||||||++|+|.++++||++|.+|++.+++.++ |+...+ .....+ .+..||+.+| |++++++.|||+++
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 57999999999999999999999999999999998754 332211 112233 3445999988 99999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
|+++++++||+|||++++ +++..++|||+|++.+++. ..+......++++.+++...+..+++|++.||++
T Consensus 83 L~leaa~eALedAGi~~~---~i~~~~~Gv~vG~~~~d~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~ 153 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSGSETS------EALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR 153 (965)
T ss_dssp HHHHHHHHHHHHTTCCGG---GGTTSCCEEEEEECCCHHH------HHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCChH---HcCCceeEEEEeccchhHH------HHHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence 999999999999999987 5668999999998765432 2333445566777777788899999999999999
Q ss_pred CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 175 Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
||+++|+++|+|++.||++|+++|++|+||++||||+|.+++|..+..|...+.++ |++.|+|||.+++|+++||
T Consensus 154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-----~~g~~~~Fd~~adG~~~gE 228 (965)
T 3hhd_A 154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRSE 228 (965)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-----TTCCCCTTBTTCCSBCBBC
T ss_pred CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-----CCCccccchhccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999998 7789999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
|++++||+++++|+ +||++|+|++.++|+.+ .....|++.++.++|++||++||++|+||||||+|||||+.||+
T Consensus 229 GagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~ 304 (965)
T 3hhd_A 229 GVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDP 304 (965)
T ss_dssp EEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHH
T ss_pred eEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCH
Confidence 99999999999885 48999999999999976 45667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC----ccccCCcccc
Q 013946 334 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT----NVLVGPKKER 407 (433)
Q Consensus 334 ~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~----~~~~~~~~~~ 407 (433)
+|.++|.++|+.. .+++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++. ++.+..+.++
T Consensus 305 ~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~ 384 (965)
T 3hhd_A 305 QELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLP 384 (965)
T ss_dssp HHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEE
T ss_pred HHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCcc
Confidence 9999999999753 368999999999999999999999999999999999999999999999862 3455566778
Q ss_pred cCccEEEEecccccceeeeeEEccC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|+.+++++|||||||+|+|+||+++
T Consensus 385 ~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 385 VRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp CCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCeEEEecccCCCceEEEEeccC
Confidence 8888999999999999999999986
No 19
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=100.00 E-value=4.5e-73 Score=657.52 Aligned_cols=394 Identities=25% Similarity=0.386 Sum_probs=352.3
Q ss_pred CCCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCC-CCCCCCC-ccccccc---cCCCCCCC-CChhhhhcCCHHHH
Q 013946 21 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIET-FDCTSFP-TKIAAEI---KSFSTDGW-VAPKLSKRMDKFML 94 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~-~~~~~~~-~~~~~~i---~~~~~~~~-i~~~~~~~~~~~~~ 94 (433)
|++|+||||||++|+|.++++||++|.+|++++++.++ |+...+. ....+.+ ..||+.+| |++++++.|||++|
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r 80 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR 80 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence 36899999999999999999999999999999998743 4433221 2233444 45999988 99999999999999
Q ss_pred HHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC
Q 013946 95 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 174 (433)
Q Consensus 95 l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 174 (433)
|+++++++||+|||++++ .++++++|||+|++.+++. ..+..+....+++.+++...++.+++|++.|||+
T Consensus 81 l~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~ 151 (2512)
T 2vz8_A 81 MLLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSDAS------EALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK 151 (2512)
T ss_dssp HHHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCHHH------HHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHHHH------HHHhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence 999999999999999986 6778999999999875442 2223344567778888889999999999999999
Q ss_pred CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 175 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 175 Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
||+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|.++++|+ |++.|||||.++||+++||
T Consensus 152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-----~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-----TTCSCCSSSTTCCCBCBBC
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-----CCCCCCCCCCCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999998 7789999999999999999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
|++++|||++++|. +||++|+|+++++||++ ...+.|++.++.++|++||++||++|+||+|||+|||||+.||+
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~ 302 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDP 302 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHH
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCH
Confidence 99999999999985 59999999999999974 45567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-C---ccccCCcccc
Q 013946 334 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-T---NVLVGPKKER 407 (433)
Q Consensus 334 ~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~---~~~~~~~~~~ 407 (433)
+|++||.++|+.. .+++|+|+|+|+||+++|||++++||++++|++|.|||++|+++|+|.++ + ++.+..+.++
T Consensus 303 ~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~ 382 (2512)
T 2vz8_A 303 QELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLP 382 (2512)
T ss_dssp HHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCB
T ss_pred HHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCcc
Confidence 9999999999853 36899999999999999999999999999999999999999999999986 3 3445556777
Q ss_pred cCccEEEEecccccceeeeeEEccC
Q 013946 408 LEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 408 ~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|+.+++++|||||||+|+|+||+++
T Consensus 383 ~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 383 IRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp CCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCeEEEeccCCCCceeEEEEccC
Confidence 8878999999999999999999976
No 20
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1e-72 Score=604.56 Aligned_cols=397 Identities=26% Similarity=0.396 Sum_probs=349.0
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCC---CCCCCCCcccccccc---CCCCCCC-CChhhhhcCCHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIET---FDCTSFPTKIAAEIK---SFSTDGW-VAPKLSKRMDKF 92 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~~~~~i~---~~~~~~~-i~~~~~~~~~~~ 92 (433)
.++|+||||||++|+| .++++||++|++|++++++++. |+. ....+.++.++ .||+.+| |++++.+.|||+
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~ 116 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQ 116 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHH
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHH
Confidence 3689999999999987 7899999999999999998743 322 22245566665 5888887 999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
++|+++++++||+|||++++ +++..++|||+|++..++... .......++++.++....+..+.+|++.||
T Consensus 117 ~rl~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~d~~~~------~~~~~~~~~~~~~~g~~~~~~a~ris~~lg 187 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPV---SLRGSATGVFTGVGTVDYGPR------PDEAPDEVLGYVGTGTASSVASGRVAYCLG 187 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGG---GGTTSCEEEEEEECCCCCSCC------TTSSCGGGGGGHHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEeCCchhhhh------hhcCccccCcccccccccchHHHHHHHhcC
Confidence 99999999999999999987 566789999999986544211 011223345555566677889999999999
Q ss_pred CCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccc
Q 013946 173 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 252 (433)
Q Consensus 173 l~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ 252 (433)
++||+++|+++|+|++.||++|+++|++|+||++||||+|.+..+..+..|...+.++ |++.|+|||.+++|+++
T Consensus 188 l~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls-----~~g~~~pFd~~adG~~~ 262 (917)
T 2hg4_A 188 LEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFGL 262 (917)
T ss_dssp CCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC-----TTSCCCTTBTTCCCBCB
T ss_pred CCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC-----CccccCcccccccCCCC
Confidence 9999999999999999999999999999999999999999998888888888888887 67899999999999999
Q ss_pred ccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC
Q 013946 253 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 332 (433)
Q Consensus 253 geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D 332 (433)
|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|+++|+++|++|+||||||+|||||+.+|
T Consensus 263 gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD 342 (917)
T 2hg4_A 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGD 342 (917)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHH
T ss_pred cceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCc
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc---cccCCcc
Q 013946 333 IKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN---VLVGPKK 405 (433)
Q Consensus 333 ~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~---~~~~~~~ 405 (433)
++|.++|.++|+.. .+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.++++ +.+..+.
T Consensus 343 ~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~ 422 (917)
T 2hg4_A 343 PIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQA 422 (917)
T ss_dssp HHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSC
T ss_pred HHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCc
Confidence 99999999999752 3688999999999999999999999999999999999999999999999763 3333444
Q ss_pred ccc----CccEEEEecccccceeeeeEEccC
Q 013946 406 ERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 406 ~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
++| .+|++++|||||||+|+|+||+++
T Consensus 423 ~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 423 RSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp EECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred ccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 544 368999999999999999999986
No 21
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.4e-72 Score=601.57 Aligned_cols=397 Identities=26% Similarity=0.416 Sum_probs=349.4
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCC---CCCCCC-----------Ccccccccc---CCCCCCC-C
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIET---FDCTSF-----------PTKIAAEIK---SFSTDGW-V 81 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~---~~~~~~-----------~~~~~~~i~---~~~~~~~-i 81 (433)
.++|+||||||++|+| .++++||++|.+|++.+++++. |+...+ ..+.++.++ .||..+| |
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 4689999999999999 8999999999999999988743 432111 123455554 4888877 9
Q ss_pred ChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccc
Q 013946 82 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTN 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (433)
++++.+.|||+++|+++++++||+|||++++ +++..++|||+|++.+++.... .....++++.++....+
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~~~~~~~-------~~~~~~~~~~~~g~~~~ 154 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGIDPH---SLRGTATGVFLGVAKFGYGEDT-------AAAEDVEGYSVTGVAPA 154 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGG---GGTTBCCEEEEECCCCCTTTTC-------C---CTTCHHHHTTCHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEecCchHHhhh-------ccccccccccccccccc
Confidence 9999999999999999999999999999987 5667899999999876553211 11234566666777788
Q ss_pred hHHHHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCc
Q 013946 162 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 241 (433)
Q Consensus 162 ~~a~~ia~~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 241 (433)
..+++|++.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|.+++|..+..|...+.++ +++.|+
T Consensus 155 ~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-----~~g~~~ 229 (915)
T 2qo3_A 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-----ADGRSK 229 (915)
T ss_dssp HHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-----SSCCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-----CCCCcc
Confidence 899999999999999999999999999999999999999999999999999999999888898888887 678899
Q ss_pred cccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 013946 242 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 321 (433)
Q Consensus 242 pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v 321 (433)
|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|+++|+++|++|+|||||
T Consensus 230 ~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~v 309 (915)
T 2qo3_A 230 AFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAV 309 (915)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred cccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 99999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC
Q 013946 322 NAHATSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 397 (433)
Q Consensus 322 ~~h~~gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~ 397 (433)
|+|||||+.+|++|..+|.++|+.. .+++++++|+++||+++|||++++++++++|+++.|||++|+++|+|.+++
T Consensus 310 e~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~ 389 (915)
T 2qo3_A 310 EAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDW 389 (915)
T ss_dssp ECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCC
T ss_pred EecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCccccc
Confidence 9999999999999999999999853 368899999999999999999999999999999999999999999999876
Q ss_pred c---cccCCccccc----CccEEEEecccccceeeeeEEccC
Q 013946 398 N---VLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 398 ~---~~~~~~~~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. +.+..+.++| .+|++++|||||||+|+|+||+++
T Consensus 390 ~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 390 SSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp SSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred ccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 3 3333333333 478999999999999999999986
No 22
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=100.00 E-value=1.1e-63 Score=550.69 Aligned_cols=398 Identities=25% Similarity=0.310 Sum_probs=341.2
Q ss_pred CCEEEEecceecCcCCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTA 99 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~a 99 (433)
.+|+|++ ..+.++||++|++|++.+.+.. ..++..++|+|+ +||+.+| |++++.++|||+++|++++
T Consensus 1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~a 1218 (1887)
T 2uv8_A 1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVS 1218 (1887)
T ss_dssp GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHH
T ss_pred CceeEee-------cCchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHH
Confidence 4566654 3457899999999999998852 245677889997 7999999 9999999999999999999
Q ss_pred HHHHHHhCCCC-cccc-cccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH-hCCCCC
Q 013946 100 GKKALADGGIT-EDVM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-LGWMGP 176 (433)
Q Consensus 100 a~~Al~dAgl~-~~~~-~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp 176 (433)
+++||+|||++ |.++ ..++..++||++|++.+++......+..... ...+.++.++....|..++++++. ||++||
T Consensus 1219 a~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~-~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP 1297 (1887)
T 2uv8_A 1219 VVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGP 1297 (1887)
T ss_dssp HHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTT-TCCCCTTHHHHHSTTHHHHHHHHHTTCCCSC
T ss_pred HHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHh-cCCCCcchhhcchhhHHHHHHHHHHcCCccc
Confidence 99999999995 6532 1267789999999999998776655443211 123566667777889999999995 999999
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC------CCCCCCCCccccCCCCCc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGF 250 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~~pfd~~~~G~ 250 (433)
+++++++|+|++.||+.|+++|++|+||++||||+|. +++..+..|..++.++.. +.+|++.|||||.+++||
T Consensus 1298 ~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gf 1376 (1887)
T 2uv8_A 1298 IKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGF 1376 (1887)
T ss_dssp CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSB
T ss_pred eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCc
Confidence 9999999999999999999999999999999999998 678888889999988742 456889999999999999
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC------------------hH--------------
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD------------------GV-------------- 298 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~------------------~~-------------- 298 (433)
++|||++++||++.++|+++|++||++|+|+++++|+.+.+.|.|. ..
T Consensus 1377 v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~ 1456 (1887)
T 2uv8_A 1377 MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTRE 1456 (1887)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHH
T ss_pred ccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876555442 10
Q ss_pred -----------------------------HH-------------------------------HHHHHHHHHHcCCCCCCc
Q 013946 299 -----------------------------GV-------------------------------ILCIEKALAHSGVSREDV 318 (433)
Q Consensus 299 -----------------------------~~-------------------------------~~ai~~al~~agl~~~dI 318 (433)
.+ .++|++||+++||+++||
T Consensus 1457 ~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DI 1536 (1887)
T 2uv8_A 1457 AQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDL 1536 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGE
T ss_pred HHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHc
Confidence 12 368999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcC-----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~-----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
||||+|||||+.||++|.++|.++|+. ..++++++.|+++||+.||||++++++++++|++|.|||++|+++|+|
T Consensus 1537 d~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp 1616 (1887)
T 2uv8_A 1537 GVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDK 1616 (1887)
T ss_dssp EEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCG
T ss_pred eEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCC
Confidence 999999999999999999999999963 135899999999999999999999999999999999999999999999
Q ss_pred CCC-Cccc-cCCccccc-CccEEEEecccccceeeeeEEccC
Q 013946 394 VVD-TNVL-VGPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 394 ~~~-~~~~-~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.++ ++++ +..+.++| .+|++++|||||||+|+|+|++++
T Consensus 1617 ~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1617 ILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp GGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred ccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 984 5543 23344455 689999999999999999999875
No 23
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=100.00 E-value=9.3e-64 Score=550.01 Aligned_cols=391 Identities=27% Similarity=0.323 Sum_probs=338.8
Q ss_pred CCCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCC-cc
Q 013946 36 GHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGIT-ED 112 (433)
Q Consensus 36 g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~-~~ 112 (433)
..+.++||+.|.+|++.+.+. ...++..++|+|+ +||+.+| |++++.++|||+++|+++++++||++||++ |.
T Consensus 1132 ~~~~~~~w~~L~~G~~~i~p~----~~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~AGi~~p~ 1207 (1878)
T 2uv9_A 1132 IPETGQYTVRLRKGATLLIPK----ALQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPY 1207 (1878)
T ss_dssp CTTTSCEEEEECTTCEEEEEE----EECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHTTTCSSGG
T ss_pred CCChHHHHHHHHcCCCeeeec----CCCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCChh
Confidence 356689999999999999874 2345667889997 7999888 999999999999999999999999999998 65
Q ss_pred cc-cccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH-HhCCCCCcceecccchHHHHH
Q 013946 113 VM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFC 190 (433)
Q Consensus 113 ~~-~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~v~~acas~~~A 190 (433)
++ ..++..++|+++|++.+++......+..... ...+.++.++....|..++++++ .||++||+++++++|+|++.|
T Consensus 1208 e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~-~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tACASsl~A 1286 (1878)
T 2uv9_A 1208 EFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYL-DKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVES 1286 (1878)
T ss_dssp GHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTT-TCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCGGGHHHHH
T ss_pred hhhcccCccceEEEEccCCccHHHHHHHHHHHHh-cCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCcchHHHHH
Confidence 32 1267899999999999998776655443211 12367777888889999999999 599999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhc------CCCCCCCCCccccCCCCCcccccceeEEEecch
Q 013946 191 ILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ------RNNDPTKASRPWDINRDGFVMGEGAGVLLLEEL 264 (433)
Q Consensus 191 l~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------~~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~ 264 (433)
|+.|++.|++|+||++||||+|. +++..+..|..++.++. .+.+|++.|||||.+++||++|||++++||++.
T Consensus 1287 l~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~ 1365 (1878)
T 2uv9_A 1287 LDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTA 1365 (1878)
T ss_dssp HHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEH
T ss_pred HHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeH
Confidence 99999999999999999999998 67888888999998874 255688999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC-h----------------------------------------------
Q 013946 265 EHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD-G---------------------------------------------- 297 (433)
Q Consensus 265 ~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~-~---------------------------------------------- 297 (433)
+.|+++|++||++|+|+++++|+.+...|.|. +
T Consensus 1366 ~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~ 1445 (1878)
T 2uv9_A 1366 QLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQE 1445 (1878)
T ss_dssp HHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 99999999999999999999999876655551 0
Q ss_pred --------------------HHHH-------------------------------HHHHHHHHHcCCCCCCccEEEeccC
Q 013946 298 --------------------VGVI-------------------------------LCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 298 --------------------~~~~-------------------------------~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
..+. ++|++||+++||+++||||||+|||
T Consensus 1446 ~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGT 1525 (1878)
T 2uv9_A 1446 EVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGT 1525 (1878)
T ss_dssp HHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCC
T ss_pred HHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCC
Confidence 0122 7899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcC--C---CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-Cccc
Q 013946 327 STPAGDIKEYQALIHCFGQ--N---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVL 400 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~--~---~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~ 400 (433)
||+.||++|.++|.++|+. . .++++++.|+++||+.||||++++++++++|++|.|||++|+++|+|.++ ++++
T Consensus 1526 gT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v 1605 (1878)
T 2uv9_A 1526 STVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYI 1605 (1878)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTE
T ss_pred CCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCcccccccc
Confidence 9999999999999999974 1 35899999999999999999999999999999999999999999999984 5543
Q ss_pred c-CCccccc-CccEEEEecccccceeeeeEEccC
Q 013946 401 V-GPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~-~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. ..+..++ .+|++++|||||||+|+|+|++++
T Consensus 1606 ~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1606 VYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp ECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred ccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 2 2233333 589999999999999999999874
No 24
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-66 Score=548.99 Aligned_cols=390 Identities=25% Similarity=0.317 Sum_probs=334.7
Q ss_pred CCHHHHHHHHHcCCCCceeCCCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCC-ccc
Q 013946 37 HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGIT-EDV 113 (433)
Q Consensus 37 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~-~~~ 113 (433)
.+.++||++|.+|++.+.+. ...++..++|+++ +||+.+| |++++.++|||+++|+++++++||++||++ |.+
T Consensus 959 ~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~e 1034 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYE 1034 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGGG
T ss_pred CCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChHH
Confidence 35689999999999999873 3345667889997 7999999 999999999999999999999999999998 653
Q ss_pred c-cccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH-HhCCCCCcceecccchHHHHHH
Q 013946 114 M-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFCI 191 (433)
Q Consensus 114 ~-~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~v~~acas~~~Al 191 (433)
+ ..++..++|+++|++.+++......+..... ...++++.++....|..++++++ .||++||+++|+++|+|++.||
T Consensus 1035 i~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~-~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL 1113 (1688)
T 2pff_A 1035 MYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK-DEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESV 1113 (1688)
T ss_dssp GGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSS-CCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHH
T ss_pred hccccCCceEEEEecccCCCHHHHHHHHHHHHh-cCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHH
Confidence 2 1267899999999999988766655443211 12356677777788999999999 7999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC------CCCCCCCCccccCCCCCcccccceeEEEecchH
Q 013946 192 LNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGEGAGVLLLEELE 265 (433)
Q Consensus 192 ~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~ 265 (433)
..|+++|++|+||++||||+|. +++..+..|..++.++.. +.+|++.|||||.+++|+++||||+++||++.+
T Consensus 1114 ~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1114 DIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp HHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSH
T ss_pred HHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHH
Confidence 9999999999999999999998 577777778888888743 445889999999999999999999999999999
Q ss_pred HHHhcCCeEEEEEEEeeeccCCCCCCCCCCC------------------hH-----------------------------
Q 013946 266 HAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD------------------GV----------------------------- 298 (433)
Q Consensus 266 ~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~------------------~~----------------------------- 298 (433)
.|+++|++||++|+|+++++|+.+.+.|.|. +.
T Consensus 1193 ~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~ 1272 (1688)
T 2pff_A 1193 LALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALK 1272 (1688)
T ss_dssp HHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999999999999998765433331 00
Q ss_pred --------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEEeccCCCCCCCH
Q 013946 299 --------------GV-------------------------------ILCIEKALAHSGVSREDVNYINAHATSTPAGDI 333 (433)
Q Consensus 299 --------------~~-------------------------------~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~ 333 (433)
.+ .++|++||+++|++++||||||+|||||++||+
T Consensus 1273 ~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~ 1352 (1688)
T 2pff_A 1273 LEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDK 1352 (1688)
T ss_dssp HHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSST
T ss_pred HHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccH
Confidence 12 368999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC-----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC-Cccc-cCCccc
Q 013946 334 KEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVL-VGPKKE 406 (433)
Q Consensus 334 ~E~~al~~~~~~-----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~-~~~~~~ 406 (433)
+|.++|.++|+. ..++++++.|+++||+.||||++++++++++|++|.|||++|+++|+|.++ ++++ ...+.+
T Consensus 1353 iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~ 1432 (1688)
T 2pff_A 1353 NESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTL 1432 (1688)
T ss_dssp TTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCC
T ss_pred HHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccc
Confidence 999999999974 135899999999999999999999999999999999999999999999985 4433 233444
Q ss_pred cc-CccEEEEecccccceeeeeEEccC
Q 013946 407 RL-EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 407 ~~-~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+| .+|++++|||||||+|+|+|+++.
T Consensus 1433 ~~~~~r~AlVnSFGFGGtNAhvILe~p 1459 (1688)
T 2pff_A 1433 KTDGVRAVSITSFGFGQKGGQAIVVHP 1459 (1688)
T ss_dssp SSSSSSCCCCCCCCSTTCCCCCCEECS
T ss_pred cCCCCcEEEEeeECCCCeeEEEEEeCC
Confidence 55 689999999999999999999875
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=100.00 E-value=2.3e-61 Score=556.09 Aligned_cols=367 Identities=26% Similarity=0.365 Sum_probs=321.9
Q ss_pred CCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCCccccc-ccCCCeeEEEEeccCCchHHHHHHH
Q 013946 64 FPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAI 140 (433)
Q Consensus 64 ~~~~~~~~i~-~~~~~~~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~-~~~~~~~gv~~g~~~g~~~~~~~~~ 140 (433)
++.+++++++ +||+.+| |++++++.|||+++|+++++++||+|||+++++++ .++..++|||+|++.|++...++.+
T Consensus 2617 ~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~ 2696 (3089)
T 3zen_D 2617 LSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMY 2696 (3089)
T ss_dssp CSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHH
T ss_pred ccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHH
Confidence 4556788884 7999998 99999999999999999999999999999998663 3477899999999999988777766
Q ss_pred HHHHhhcccCCCCcccccccchHHHHHHH-HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh
Q 013946 141 EALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG 219 (433)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~ 219 (433)
..+..+....++ .++....|..+++++. +||++||+++|+++|+||+.||+.|+++|++|+||++||||+|. +++..
T Consensus 2697 ~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~ 2774 (3089)
T 3zen_D 2697 HGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEA 2774 (3089)
T ss_dssp HHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHH
T ss_pred HHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHH
Confidence 655433333333 3566677888999986 45999999999999999999999999999999999999999999 78888
Q ss_pred hHHHHHhhhhh------cCCCCCCCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCC
Q 013946 220 LGGFVACRALS------QRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 293 (433)
Q Consensus 220 ~~~~~~~~~ls------~~~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~ 293 (433)
+..|..++.++ ..+.+|++.|||||.+++|+++|||++++||++.++|+++|++||++|.+.+.++|+.+...+
T Consensus 2775 ~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~ 2854 (3089)
T 3zen_D 2775 IIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIP 2854 (3089)
T ss_dssp HHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSS
T ss_pred HHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCcc
Confidence 88898888765 345678999999999999999999999999999999999999999999999999999988877
Q ss_pred CCCh-------HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHH---HHHHHHcCC--CCcccccchhhhhhH
Q 013946 294 HPDG-------VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ---ALIHCFGQN--RGLRVNSTKSMIGHL 361 (433)
Q Consensus 294 ~~~~-------~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~---al~~~~~~~--~~~~v~s~k~~~Gh~ 361 (433)
.|.. .++.++|++||+++|++++||||||+|||||++||++|.. ++.++|+.. .++++++.|+++||+
T Consensus 2855 aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~ 2934 (3089)
T 3zen_D 2855 APGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHA 2934 (3089)
T ss_dssp CCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBC
T ss_pred CCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCc
Confidence 7752 3566799999999999999999999999999999999999 778889864 368999999999999
Q ss_pred hhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCC--ccccCCccccc----CccEEEEecccccceeeeeEEccC
Q 013946 362 LGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT--NVLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 362 ~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+||||++++++++++|+++.|||++|+++|+|.++. ++.+..+.++| ++|++++|||||||+|+|+||+++
T Consensus 2935 ~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~ 3011 (3089)
T 3zen_D 2935 KGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHP 3011 (3089)
T ss_dssp STTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECG
T ss_pred hhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecC
Confidence 999999999999999999999999999999999872 34444444444 479999999999999999999986
No 26
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=3.5e-37 Score=302.45 Aligned_cols=271 Identities=17% Similarity=0.233 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
..+|+++++++||+|| |++++++| +|++|+..+... ..+..+.+++..
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~ia~~ 78 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTLE------------------------QGWNIARMASLM 78 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence 4679999999999999 99998777 899998653210 124578899999
Q ss_pred hCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhhh------------------HHHHHhhh-
Q 013946 171 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGL------------------GGFVACRA- 228 (433)
Q Consensus 171 lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~~------------------~~~~~~~~- 228 (433)
||+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |... .++...+.
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLG 158 (390)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHH
T ss_pred cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHH
Confidence 999 8999999999999999999999999999999999999997532 2210 11111111
Q ss_pred ----hhcC----------------------CCC--C------CCCCccccCC---------------------CCCcc--
Q 013946 229 ----LSQR----------------------NND--P------TKASRPWDIN---------------------RDGFV-- 251 (433)
Q Consensus 229 ----ls~~----------------------~~~--~------~~~~~pfd~~---------------------~~G~~-- 251 (433)
+++. .+. | .+.++|||.+ ++|++
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~ 238 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEec
Confidence 1110 000 1 1123789988 79999
Q ss_pred -----cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 252 -----MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 252 -----~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
++|||+++||++++.|+++|.+++++|+|++.+++. |.+.+.+...+++++|+++|++++||||||+|++
T Consensus 239 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred hhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 999999999999999999999999999999988643 3444567789999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcCC----CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 327 STPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~~----~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
++ .|..++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 f~-----~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~---------------------- 366 (390)
T 1wdk_C 314 FA-----AQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN---------------------- 366 (390)
T ss_dssp BH-----HHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CH-----HHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------------------
Confidence 87 4677777888753 2578999999999999999999999999999973
Q ss_pred CcccccCccEEEEecccccceeeeeEEcc
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+++++++.+.||.+.++||++
T Consensus 367 ------~~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 367 ------GGTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ------CCCEEEEEecccchheEEEEEEe
Confidence 23577887777889999999986
No 27
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=1.7e-36 Score=298.20 Aligned_cols=269 Identities=19% Similarity=0.254 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
.+|+++++++||+|||++++++| ++++|+..+.. .....+.+++..+|
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~ia~~lg 78 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS-------EVIFGHVLAAG-------------------------CGQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCCHHHHHHHHHcC
Confidence 67999999999999999998776 79999865321 02346889999999
Q ss_pred C--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------------hHH---------H--H
Q 013946 173 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------LGG---------F--V 224 (433)
Q Consensus 173 l--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------~~~---------~--~ 224 (433)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. +.. | .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 7999999999999999999999999999999999999997642 210 000 0 0
Q ss_pred Hhhhhhc-----CC-------------------------------------------CCCCC------------CCcc-c
Q 013946 225 ACRALSQ-----RN-------------------------------------------NDPTK------------ASRP-W 243 (433)
Q Consensus 225 ~~~~ls~-----~~-------------------------------------------~~~~~------------~~~p-f 243 (433)
.++.+++ ++ .+++. .+|| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 1111110 00 00121 4889 9
Q ss_pred cCCCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 244 DINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 244 d~~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
|.+++|++ ++|||+++||++++.|+++|.+++++|+|++.+++ .|.+.+.+...+++++|+++|++++
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999998863 3444566788999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||||||+|...+ ....++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~d~f~-----~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--------------- 373 (397)
T 1wl4_A 314 DVDIFEINEAFA-----AVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--------------- 373 (397)
T ss_dssp GCCEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HCCEEEEecccH-----HHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc---------------
Confidence 999999886544 2335577888754 3688999999999999999999999999999883
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.++++++..+.||.+.++||++
T Consensus 374 -------------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -------------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -------------CCCEEEEEEecccchheEEEEEe
Confidence 23688888777789999999986
No 28
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.4e-36 Score=299.36 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| +|++|+..++.. ..+..+.+++..+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~va~~l 74 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQAGE------------------------DNRNVARMALLLA 74 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSST------------------------TTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCC------------------------CCChHHHHHHHHh
Confidence 357999999999999999998777 899998653210 1245688999999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------------h----------HHHH
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------L----------GGFV 224 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------~----------~~~~ 224 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. + .++.
T Consensus 75 Gl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 154 (401)
T 1ulq_A 75 GFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM 154 (401)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHH
T ss_pred CCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 7899999999999999999999999999999999999997543 220 0 1121
Q ss_pred --H-----hhhh---------------------h-----------cCC----------------CCCCC-----------
Q 013946 225 --A-----CRAL---------------------S-----------QRN----------------NDPTK----------- 238 (433)
Q Consensus 225 --~-----~~~l---------------------s-----------~~~----------------~~~~~----------- 238 (433)
. ++.. + ... .++++
T Consensus 155 p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 155 QALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHH
T ss_pred ccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHH
Confidence 0 1110 0 000 00111
Q ss_pred -CCcc-ccCCCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHH
Q 013946 239 -ASRP-WDINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 309 (433)
Q Consensus 239 -~~~p-fd~~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~ 309 (433)
.+|| ||. +|++ ++|||+++||++++.|+++|.+++++|+|++.+++.. .+.+.+...++++||+
T Consensus 235 ~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~ 307 (401)
T 1ulq_A 235 AALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP-----RIMGIGPVPATRKALE 307 (401)
T ss_dssp HHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHH
T ss_pred hhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCc-----cccchhHHHHHHHHHH
Confidence 3466 774 5776 7999999999999999999999999999999987642 2234567899999999
Q ss_pred HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcC---CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCC
Q 013946 310 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386 (433)
Q Consensus 310 ~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~---~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 386 (433)
++|++++||||||+|++++. .|+..++. |+- ..++++++.+..+||++||+|+.++++++++|+++
T Consensus 308 ~Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------ 376 (401)
T 1ulq_A 308 RAGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------ 376 (401)
T ss_dssp HTTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------
T ss_pred HcCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc------
Confidence 99999999999999998885 56666654 452 24678889999999999999999999999999984
Q ss_pred CCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 387 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.++++++++++||.|+++||+++
T Consensus 377 ----------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ----------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ----------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 257899999999999999999875
No 29
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=8.9e-36 Score=295.23 Aligned_cols=272 Identities=17% Similarity=0.249 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| +|++|+..++.. ..+..+.+++..+
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-------~vi~g~~~~~~~------------------------~~~~~a~~va~~l 103 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-------DIVVGTVLAPGS------------------------QRASECRMAAFYA 103 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECCSSBHH------------------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCccC------------------------CCChHHHHHHHHc
Confidence 357899999999999999998776 799998754321 1234578899999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hh---------hhH-HHH-----Hh-------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI---------GLG-GFV-----AC------- 226 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~---------~~~-~~~-----~~------- 226 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |. .+. ++. .+
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~ 183 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENV 183 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHH
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHH
Confidence 99 7899999999999999999999999999999999999997543 11 000 110 00
Q ss_pred ----------------------------hhhhcCC-------------------CCCCC------------CCcc-ccCC
Q 013946 227 ----------------------------RALSQRN-------------------NDPTK------------ASRP-WDIN 246 (433)
Q Consensus 227 ----------------------------~~ls~~~-------------------~~~~~------------~~~p-fd~~ 246 (433)
+.+.... .+.++ .+|| ||.
T Consensus 184 ~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~- 262 (442)
T 2wu9_A 184 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK- 262 (442)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT-
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC-
Confidence 1111000 00111 3456 764
Q ss_pred CCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 247 RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 247 ~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId 319 (433)
+|++ ++|||+++||++++.|+++|.+++++|+|++.+.+. |.+.+.+...+++++|+++|++++|||
T Consensus 263 -~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 263 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVD-----PAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp -TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred -CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCC-----chhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 5776 699999999999999999999999999999998762 333456778999999999999999999
Q ss_pred EEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc
Q 013946 320 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 398 (433)
Q Consensus 320 ~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 398 (433)
|||+|+++|. .|+.+++ .|+-. .++++++.+..+||++||+|+.++++++++|+++. |
T Consensus 337 ~iE~h~aft~----~~l~~~~-~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~-------------- 395 (442)
T 2wu9_A 337 LFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG--K-------------- 395 (442)
T ss_dssp EEEECCSBHH----HHHHHHH-HHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC--T--------------
T ss_pred EEEEeCCChH----HHHHHHH-HhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC--C--------------
Confidence 9999999996 6887775 45532 35777788888999999999999999999999853 0
Q ss_pred cccCCcccccCccEEEE-ecccccceeeeeEEccCC
Q 013946 399 VLVGPKKERLEVKAALS-NSFGFGGHNSSIIFSPYK 433 (433)
Q Consensus 399 ~~~~~~~~~~~~~~~l~-~s~g~gG~n~~~vl~~~~ 433 (433)
+.+++++ +++| ||.|+++||++++
T Consensus 396 ----------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 ----------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp ----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred ----------CCCEEEEEeecc-cchheEEEEEecc
Confidence 3468884 6688 9999999999863
No 30
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=1.2e-35 Score=292.01 Aligned_cols=268 Identities=21% Similarity=0.274 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|+|+++++++ ++++|+..+.. .....+.+++..+
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~~-------------------------~~~~~a~~ia~~l 74 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN-------EVILGQVLPAG-------------------------EGQNPARQAAMKA 74 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCcHHHHHHHHHc
Confidence 467999999999999999998776 78888764311 1234688999999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh--------------hHHH-----------
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------LGGF----------- 223 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------~~~~----------- 223 (433)
|++ +|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. +..+
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 998 899999999999999999999999999999999999997533 210 0000
Q ss_pred HHhhhhh-----cCCCC-----------------------------CC-----CCCccccCC------------------
Q 013946 224 VACRALS-----QRNND-----------------------------PT-----KASRPWDIN------------------ 246 (433)
Q Consensus 224 ~~~~~ls-----~~~~~-----------------------------~~-----~~~~pfd~~------------------ 246 (433)
..++.++ +++.+ |. ..|+|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v 234 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPA 234 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 0011110 00000 10 126889887
Q ss_pred --CCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 247 --RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 247 --~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
++|++ ++|||+++||++++.|+++|.+++++|+|++.+++ .|.+.+.+...+++++|+++|++++|
T Consensus 235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 309 (392)
T 2vu1_A 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGD 309 (392)
T ss_dssp SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHH
Confidence 78999 99999999999999999999999999999998764 23444567789999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHH--HHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQA--LIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~a--l~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
|||||+|. ..|..+ +.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 310 Id~ie~~d-------~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~-------------- 368 (392)
T 2vu1_A 310 LDLVEANE-------AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR-------------- 368 (392)
T ss_dssp CSEEEECC-------SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEecc-------ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc--------------
Confidence 99999884 445555 46777753 3688999999999999999999999999999873
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++...-||.+.++||++
T Consensus 369 --------------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 --------------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp --------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEecccchheEEEEEe
Confidence 23577776554488999999986
No 31
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=283.93 Aligned_cols=270 Identities=16% Similarity=0.212 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| +|++|+...+. ..+..+..++..+
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~~a~~l 102 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG-------DICVGNVLQPG-------------------------AGAIMARIAQFLS 102 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECSSSBG-------------------------GGHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCcc-------------------------ccccHHHHHHHHc
Confidence 477999999999999999998777 79999865322 1134566788899
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh---------h------------HHHHH---
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------L------------GGFVA--- 225 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~---------~------------~~~~~--- 225 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... + .++..
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 7899999999999999999999999999999999999997643110 0 11100
Q ss_pred ---------------------------hhhhhcCC------------------CCCCCCCcc-------------ccCCC
Q 013946 226 ---------------------------CRALSQRN------------------NDPTKASRP-------------WDINR 247 (433)
Q Consensus 226 ---------------------------~~~ls~~~------------------~~~~~~~~p-------------fd~~~ 247 (433)
.+.+.... .+++..+|| ||.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 01111100 113567888 99875
Q ss_pred -----CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 013946 248 -----DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYIN 322 (433)
Q Consensus 248 -----~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~ 322 (433)
+|+.++|||+++||++++.|+++|.+|+++|+|++.+.. .|.+.+.+...++++||+++|++++||||||
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999988753 2333456778899999999999999999999
Q ss_pred eccCCCCCCCHHHHHHHHHHHcCCCCcccccch--hhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 323 AHATSTPAGDIKEYQALIHCFGQNRGLRVNSTK--SMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 323 ~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k--~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
+|++++ .+|..|.++|.. . +.+++..+ .++||++||+|+.++++++++|+++
T Consensus 338 ~h~af~-~~~~~~~~~lg~--~---~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~-------------------- 391 (418)
T 2iik_A 338 INEAFA-SQAAYCVEKLRL--P---PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR-------------------- 391 (418)
T ss_dssp ECCSBH-HHHHHHHHHHTC--C---GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred eeccch-HHHHHHHHHcCC--C---ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--------------------
Confidence 998665 678888888742 1 23566555 5789999999999999999999871
Q ss_pred cCCcccccCcc-EEEEecccccceeeeeEEccC
Q 013946 401 VGPKKERLEVK-AALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~~~~~~~~~~~-~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..+ +++++..+.||...++||+++
T Consensus 392 --------~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 392 --------GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp --------TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------CCCeeeEEEEeeccchhheEEEecc
Confidence 113 677787888899999999875
No 32
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=3.1e-34 Score=281.32 Aligned_cols=268 Identities=15% Similarity=0.205 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHhCC----CCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHH
Q 013946 92 FMLYLLTAGKKALADGG----ITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAML 167 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAg----l~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 167 (433)
..+|+++++++||+||| ++++++| +|++|+..++. ..+..+.++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~v 82 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLNVG-------------------------AGATEHRAA 82 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSSBG-------------------------GGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHH
Confidence 35789999999999999 9998776 79999865321 134568899
Q ss_pred HHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcc-hhh-----------h--HHH-----HHh
Q 013946 168 AMDLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG-----------L--GGF-----VAC 226 (433)
Q Consensus 168 a~~lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~-----------~--~~~-----~~~ 226 (433)
+..+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. + .++ ..+
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM 162 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhH
Confidence 999999 7899999999999999999999999999999999999997433 110 0 000 001
Q ss_pred hhh-----hcCC----------------------------------------CCCCC------------CCcc-ccCCCC
Q 013946 227 RAL-----SQRN----------------------------------------NDPTK------------ASRP-WDINRD 248 (433)
Q Consensus 227 ~~l-----s~~~----------------------------------------~~~~~------------~~~p-fd~~~~ 248 (433)
+.+ .+++ .++++ .+|| ||.++
T Consensus 163 ~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~- 241 (393)
T 1afw_A 163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR- 241 (393)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-
Confidence 111 0000 01222 2456 87654
Q ss_pred Ccc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 013946 249 GFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 321 (433)
Q Consensus 249 G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v 321 (433)
|++ ++|||+++||++++.|+++|.+++++|+|++.+++. |.+.+.+...+++++|+++|++++|||||
T Consensus 242 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~v 316 (393)
T 1afw_A 242 GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIF 316 (393)
T ss_dssp CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 666 799999999999999999999999999999998773 33345577899999999999999999999
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccc
Q 013946 322 NAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 400 (433)
Q Consensus 322 ~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 400 (433)
|+|+++|. .|...++. |+-. .++++++.+..+||++||+|+.++++++++|+++-
T Consensus 317 e~h~~ft~----~~l~~~~~-lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~------------------- 372 (393)
T 1afw_A 317 EINEAFAA----QALYCIHK-LGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ------------------- 372 (393)
T ss_dssp EECCSBHH----HHHHHHHH-HTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC-------------------
T ss_pred EEeccCHH----HHHHHHHH-hCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC-------------------
Confidence 99999995 67776644 5532 35778888889999999999999999999998720
Q ss_pred cCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 401 VGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 401 ~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
. +++...+-||...++||+++
T Consensus 373 -------~----gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 -------I----GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp -------E----EEEEEEETTTEEEEEEEEEC
T ss_pred -------C----cEEEEeecccceEEEEEEeC
Confidence 0 34444444677788888864
No 33
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=1.2e-33 Score=277.76 Aligned_cols=270 Identities=22% Similarity=0.314 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++++++||+|+|+++++|| +|++|+.... ......+.+++..+
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~l 78 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-------ESLLGGVLTA-------------------------GLGQNIARQIALGA 78 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCC-------------------------CCCchHHHHHHHHc
Confidence 367999999999999999999888 8999986421 11234688999999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-----------------------------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 220 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~----------------------------- 220 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+......
T Consensus 79 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (396)
T 4dd5_A 79 GIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFN 158 (396)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTT
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 47999999999999999999999999999999999999975431100
Q ss_pred ---HHHHH------------------------------hhhhhcC-------------CCCCCCCCcc------------
Q 013946 221 ---GGFVA------------------------------CRALSQR-------------NNDPTKASRP------------ 242 (433)
Q Consensus 221 ---~~~~~------------------------------~~~ls~~-------------~~~~~~~~~p------------ 242 (433)
.++.. .+.+... ..+++..+|+
T Consensus 159 ~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~ 238 (396)
T 4dd5_A 159 NYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRP 238 (396)
T ss_dssp TEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCC
Confidence 00000 0000000 0123333332
Q ss_pred -ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 243 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 243 -fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
|+. ..++..++||++++||++++.|++++.+++++|+|++.+++ .|.+.+.++..+++++|+++|++++
T Consensus 239 v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (396)
T 4dd5_A 239 AFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIE 313 (396)
T ss_dssp SSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHH
Confidence 432 25677889999999999999999999999999999998765 3444556788999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCC
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 395 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~ 395 (433)
||||||+|++++ .|..++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ve~~d~f~-----~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------- 373 (396)
T 4dd5_A 314 DIDLVEANEAFA-----AQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--------------- 373 (396)
T ss_dssp GCSEEEECCSBH-----HHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HcCEEEecChHH-----HHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 999999997754 6888888888754 4688999999999999999999999999999872
Q ss_pred CCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 396 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++..+.||+..++||++
T Consensus 374 -------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 -------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp -------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------------CCCeEEEEEcccCCceeEEEEeC
Confidence 24789999999999999999985
No 34
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-33 Score=277.06 Aligned_cols=271 Identities=20% Similarity=0.299 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++++++||+|+|+++++|| ++++|+.... ......+.+++..+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~i~~~l 76 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD-------EVILGHCIQR-------------------------TDEANTARTAALAA 76 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCC-------------------------GGGCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC-------EEEEEEccCC-------------------------CccchHHHHHHHHc
Confidence 357999999999999999999888 8999986421 11234578899999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-----------------------------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 220 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~----------------------------- 220 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+......
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 47999999999999999999999999999999999999875432110
Q ss_pred --HHHHHh------------------------------hhhhcC-------------CCCCCCCCcc-------------
Q 013946 221 --GGFVAC------------------------------RALSQR-------------NNDPTKASRP------------- 242 (433)
Q Consensus 221 --~~~~~~------------------------------~~ls~~-------------~~~~~~~~~p------------- 242 (433)
.++... +.+... ..+|++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 000000 000000 0134455554
Q ss_pred ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 013946 243 WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 317 (433)
Q Consensus 243 fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~d 317 (433)
|+. ..++..++||++++||++.+.|++++.+++++|+|++.++. .|.+.+.++..+++++|+++|++++|
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 653 25778899999999999999999999999999999998753 34444556889999999999999999
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 396 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 396 (433)
|||||+|++.+ .|..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 312 Id~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------- 370 (394)
T 3ss6_A 312 ADLLEINEAFA-----AQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR---------------- 370 (394)
T ss_dssp CSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------
T ss_pred cCEEEeCCchH-----HHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc----------------
Confidence 99999997654 7888999998854 3688999999999999999999999999999872
Q ss_pred CccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 397 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.++++++..+.||...++||++.
T Consensus 371 ------------~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 371 ------------GLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp ------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------CCCEEEEEEccCcCceeEEEEEcC
Confidence 246788888888899999999863
No 35
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=1.4e-33 Score=277.64 Aligned_cols=243 Identities=18% Similarity=0.265 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
..+|+++++++||+|||++++++| ++++|+..+. ...+..+.+++..+
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~-------------------------~~~~~~a~~va~~l 79 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK-------EAYMGNVLQG-------------------------GEGQAPTRQAVLGA 79 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCCchHHHHHHHHc
Confidence 367999999999999999998776 7888875421 11234688999999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh-------------------hHH--------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGG-------- 222 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~-------------------~~~-------- 222 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... +..
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 7999999999999999999999999999999999999997433111 000
Q ss_pred ---------HHHhhhhhcC----------------------C-----------------CCCCCCCcc--ccC-------
Q 013946 223 ---------FVACRALSQR----------------------N-----------------NDPTKASRP--WDI------- 245 (433)
Q Consensus 223 ---------~~~~~~ls~~----------------------~-----------------~~~~~~~~p--fd~------- 245 (433)
+...+ +++. . .+.++.+++ ||.
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 01111 0000 0 001112222 554
Q ss_pred --CCCCcc-------cccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 013946 246 --NRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 316 (433)
Q Consensus 246 --~~~G~~-------~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~ 316 (433)
+++|++ ++|||+++||++++.|+++|.+++++|+|++.+. ..|.+.+.++..+++++|+++|++++
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 568999 9999999999999999999999999999999764 22333456788999999999999999
Q ss_pred CccEEEeccCCCCCCCHHHHHHHHHH--HcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 317 DVNYINAHATSTPAGDIKEYQALIHC--FGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 317 dId~v~~h~~gt~~~D~~E~~al~~~--~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
||||||+| |..|..+|..+ |+.. .++++++.|.++||++||+|+.++++++++|++
T Consensus 314 dId~ie~~-------D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 314 DIAMWEVN-------EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp GEEEEEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred HcCEEEEc-------cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 99999976 55667777666 7643 368899999999999999999999999999975
No 36
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=2.4e-33 Score=274.58 Aligned_cols=272 Identities=18% Similarity=0.216 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHHhC-CCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dA-gl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
..+|+++++++||+|+ |+++++|| ++++|+..... ......+.+++..
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id-------~v~~g~~~~~~------------------------~~~~~~a~~~~~~ 75 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLD-------DIYWGCVQQTL------------------------EQGFNIARNAALL 75 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCC-------EEEEECSCCSB------------------------TTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC-------EEEEEcccCCc------------------------ccccHHHHHHHHH
Confidence 5679999999999999 99999888 89999864211 0023457789999
Q ss_pred hCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-------------------HHHHH----
Q 013946 171 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL-------------------GGFVA---- 225 (433)
Q Consensus 171 lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~-------------------~~~~~---- 225 (433)
+|+ .+|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+...... .++..
T Consensus 76 ~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 155 (387)
T 3goa_A 76 AEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLS 155 (387)
T ss_dssp TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHH
T ss_pred cCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHH
Confidence 999 57999999999999999999999999999999999999976432110 00000
Q ss_pred --------------------------hhhhhcC--------------CCCCCCCCcc-------------ccC------C
Q 013946 226 --------------------------CRALSQR--------------NNDPTKASRP-------------WDI------N 246 (433)
Q Consensus 226 --------------------------~~~ls~~--------------~~~~~~~~~p-------------fd~------~ 246 (433)
.+.+... ..++++.+|| |+. .
T Consensus 156 ~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~ 235 (387)
T 3goa_A 156 RLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTA 235 (387)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceec
Confidence 0011100 0112333443 554 2
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 326 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~ 326 (433)
.++..++||++++||++++.|+++|.+++++|+|++.+.+... +.+.+...+++++|+++|++++||||||+|++
T Consensus 236 ~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~ve~h~~ 310 (387)
T 3goa_A 236 GTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPS-----IMGYGPVPASKLALKKAGLSASDIDVFEMNEA 310 (387)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTT-----STTCTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred ccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCC-----cchHHHHHHHHHHHHHcCCCHHHcCEEEEeCc
Confidence 5777899999999999999999999999999999999887533 33345689999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHcC----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccC
Q 013946 327 STPAGDIKEYQALIHCFGQ----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 402 (433)
Q Consensus 327 gt~~~D~~E~~al~~~~~~----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 402 (433)
++. .+...+ +.++- ..++++++.|..+||++||+|+.++++++++|+++
T Consensus 311 f~~----~~~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------- 363 (387)
T 3goa_A 311 FAA----QILPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK---------------------- 363 (387)
T ss_dssp BHH----HHHHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred chH----HHHHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc----------------------
Confidence 885 344433 34443 12577889999999999999999999999999871
Q ss_pred CcccccCccEEEEecccccceeeeeEEccC
Q 013946 403 PKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 403 ~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
..++++++..+-||...++||++.
T Consensus 364 ------~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 364 ------DAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ------CCCEEEEEeccCcCceEEEEEEeC
Confidence 236777766667788999999863
No 37
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=8.7e-33 Score=271.83 Aligned_cols=270 Identities=22% Similarity=0.312 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+++++++||+|+|+++++|| ++++|+.... ......+.+++..+
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~~~~~l 76 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-------EVIIGNVLQT-------------------------GLGQNVARQIAINA 76 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECCCCS-------------------------STTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCcchHHHHHHHHc
Confidence 356999999999999999999888 8999976421 11234578899999
Q ss_pred CC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhh-----------------------------
Q 013946 172 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 220 (433)
Q Consensus 172 gl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~----------------------------- 220 (433)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+......
T Consensus 77 Gl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 4e1l_A 77 GIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFN 156 (395)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETT
T ss_pred CCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccc
Confidence 99 57999999999999999999999999999999999999976542110
Q ss_pred ---HHHHHhh------------------------------hhhcC--------------CCCCCCCCcc-----------
Q 013946 221 ---GGFVACR------------------------------ALSQR--------------NNDPTKASRP----------- 242 (433)
Q Consensus 221 ---~~~~~~~------------------------------~ls~~--------------~~~~~~~~~p----------- 242 (433)
.+..... .+... ..++++.+|+
T Consensus 157 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 157 QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCC
Confidence 0000000 00000 0123334442
Q ss_pred --ccC-----CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 013946 243 --WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 315 (433)
Q Consensus 243 --fd~-----~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~ 315 (433)
|+. ..++..++||++++||++.+.|++++.+++++|.|++.+++. |.+.+.++..+++++|+++|+++
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~al~~agl~~ 311 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVE-----PEVMGTGPIPATRKALKKAGLSI 311 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGTTCTHHHHHHHHHHHTTCCG
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCC-----CCcchHHHHHHHHHHHHHcCCCH
Confidence 432 246778899999999999999999999999999999988642 33334467899999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+||||||+|+..+ .|..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 312 ~dId~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~-------------- 372 (395)
T 4e1l_A 312 NDIDLIEANEAFA-----AQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR-------------- 372 (395)
T ss_dssp GGCSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--------------
T ss_pred HHcCEEEecChhH-----HHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999996644 7888888888754 3688999999999999999999999999999872
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++++++..+-||...++||++
T Consensus 373 --------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 --------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp --------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCCCceEEEEEeC
Confidence 23678888888889999999874
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=1.7e-33 Score=269.98 Aligned_cols=293 Identities=16% Similarity=0.163 Sum_probs=210.1
Q ss_pred EEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHHHHH
Q 013946 24 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAGK 101 (433)
Q Consensus 24 v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~aa~ 101 (433)
+.|+|+|...|.. .+.+++++.+. .+ +.+-. .. .. |..+. ....++..+|+++|++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~-----~~----~G------i~~r~~~~~~~~~~~la~~a~~ 59 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLD--TS-----DEWIV-----TR----TG------IKERRVAAEDEYTSDLAFKAVE 59 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHHHH-----HH----TC------CCEEEECCTTCCHHHHHHHHHH
T ss_pred cEEEEEEEECCCceecHHHHHHHhC--CC-----HHHHH-----Hh----cC------ceEEeecCCCCCHHHHHHHHHH
Confidence 4799999999987 56667664321 10 00000 00 00 11111 1113457889999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCCCcceec
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 181 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~ 181 (433)
+||+++|+++++++ +|++|+.... ...+..+.+++..+|+++|+++|+
T Consensus 60 ~al~~ag~~~~~id-------~vi~~~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~v~ 107 (322)
T 1ub7_A 60 DLLRRHPGALEGVD-------AVIVATNTPD-------------------------ALFPDTAALVQARFGLKAFAYDLL 107 (322)
T ss_dssp HHHHHSTTTTTTEE-------EEEEECSSCS-------------------------EEESCHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCEEEeeC
Confidence 99999999988776 7898886411 112236889999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEEe
Q 013946 182 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 261 (433)
Q Consensus 182 ~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalvL 261 (433)
++|+|++.||..|+++|++|++|.+||+|+|.+ ++. ..|+| +++|+++||||+++||
T Consensus 108 ~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~---------------------~~~~d-~~~~~~~GdGA~A~vL 164 (322)
T 1ub7_A 108 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI---------------------IDWND-RATAVLFGDGGGAAVV 164 (322)
T ss_dssp CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT---------------------SCTTC-HHHHTTBCCEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc---------------------cChhh-cccceeeccccEEEEE
Confidence 999999999999999999999999999999983 321 12344 5679999999999999
Q ss_pred cchHHHHhcCCeEEEEE-EEeeeccCCCCCCC-----CCC---------Ch--------HHHHHHHHHHHHHcCCCCCCc
Q 013946 262 EELEHAKKRGAKIYAEF-RGGSFTSDAYHMTE-----PHP---------DG--------VGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 262 ~~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~~-----~~~---------~~--------~~~~~ai~~al~~agl~~~dI 318 (433)
++.+. +..+++.. .+.+...+..+... |.+ ++ ..+.++++++|+++|++++||
T Consensus 165 ~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~di 240 (322)
T 1ub7_A 165 GKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDI 240 (322)
T ss_dssp ECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred EecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 97643 34566654 33333223221110 221 23 578899999999999999999
Q ss_pred cEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc
Q 013946 319 NYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 398 (433)
Q Consensus 319 d~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~ 398 (433)
|||++|+++++..| ++.+.|+... -.+.+.|..+||+.+|++.+.+.++ ++++.+.
T Consensus 241 d~~~~H~~~~~~~d-----~~~~~lg~~~-~~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~--------------- 296 (322)
T 1ub7_A 241 RLFVPHQANLRIID-----AARERLGLPW-ERVAVNVDRYGNTSTASIPLALKEA---VDAGRIR--------------- 296 (322)
T ss_dssp SEEEECCSCHHHHH-----HHHHTTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC---------------
T ss_pred CEEEEcCCCHHHHH-----HHHHHcCCCH-HHHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC---------------
Confidence 99999999998765 3666776532 1245789999999999999977654 4555441
Q ss_pred cccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 399 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+++++++||+|++|+++||+.
T Consensus 297 ----------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 ----------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ----------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------CCCEEEEEEEChhheeEEEEEEe
Confidence 23688999999999999999974
No 39
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.98 E-value=6e-32 Score=265.89 Aligned_cols=271 Identities=16% Similarity=0.169 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHHh-CCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 92 FMLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 92 ~~~l~l~aa~~Al~d-Agl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
...|+++++++||+| +|+++++|| +|++|+..... ......+.+++..
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId-------~vi~g~~~~~~------------------------~~~~~~a~~va~~ 80 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS-------DMILGVVSPVG------------------------DQGGDIARTAVLA 80 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE-------EEEEECC--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC-------EEEEEecCccc------------------------cccCcHHHHHHHH
Confidence 467999999999999 999999888 89999753210 0013357889999
Q ss_pred hCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhh--------------------hHHHH----
Q 013946 171 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------------------LGGFV---- 224 (433)
Q Consensus 171 lgl--~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~--------------------~~~~~---- 224 (433)
+|+ .+|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... ..++.
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 5799999999999999999999999999999999999998653110 00000
Q ss_pred ------------Hh--------------hhhhc--------C---CCCCCCCCcc-------------ccCC--------
Q 013946 225 ------------AC--------------RALSQ--------R---NNDPTKASRP-------------WDIN-------- 246 (433)
Q Consensus 225 ------------~~--------------~~ls~--------~---~~~~~~~~~p-------------fd~~-------- 246 (433)
.. +.+.. . ..+|+..+|+ |+..
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 00 00000 0 0134444443 4422
Q ss_pred ------------------CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCChHHHHHHHHHHH
Q 013946 247 ------------------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 308 (433)
Q Consensus 247 ------------------~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al 308 (433)
.++..++||++++||++++.|++++.+++++|.|++.+.+.... .+.+...+++++|
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~a~~~al 315 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVI-----MLTGPTPATRKVL 315 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcc-----ccHHHHHHHHHHH
Confidence 46677999999999999999999999999999999987764322 2234578999999
Q ss_pred HHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCC
Q 013946 309 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 387 (433)
Q Consensus 309 ~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~ 387 (433)
+++|++++||||||+|++.+. .|...+ +.|+-. .++++++.|..+||++||+|+.++++++++|+++
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~----~~l~~~-~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------- 383 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFAS----VVLKFQ-KDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------- 383 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHH----HHHHHH-HHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-------
T ss_pred HHcCCCHHHCCEEEEeChhHH----HHHHHH-HHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-------
Confidence 999999999999999998885 454444 445533 4688899999999999999999999999999862
Q ss_pred CCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 388 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.++++++..+.||...++||++
T Consensus 384 ---------------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 ---------------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp ---------------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred ---------------------CCCEEEEEeeccCcceEEEEEEc
Confidence 24788888888999999999986
No 40
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.97 E-value=3.9e-31 Score=252.16 Aligned_cols=289 Identities=16% Similarity=0.218 Sum_probs=206.8
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++.|+|+|...|.. .+.+++++.+. .+ +.+ + .+.. . |..+.....++..+|+++|++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i-~~~~----G------i~~r~~~~~~~~~~l~~~a~~ 59 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--TS-----DEW----I-TTRT----G------IKERRIAKEETITYMATQAAK 59 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHH----H-HHHH----C------CCEEEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--CC-----HHH----H-HHHh----C------ceeeeecCCCCHHHHHHHHHH
Confidence 58999999999988 46666664321 10 000 0 0000 0 000100001567899999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-Cccee
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 180 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~~v 180 (433)
+||+++|++++++| +|++|+..+.. ..+..+.+++..+|+++ |++++
T Consensus 60 ~al~~ag~~~~~id-------~v~~~~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~v 107 (309)
T 2ebd_A 60 EALREANLSPEELD-------LIILATLTPQK-------------------------RFPSTACLVQAQLKAKGVYAFDI 107 (309)
T ss_dssp HHHHHHTCCGGGCS-------EEEEECSSCSS-------------------------SSSCHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCceEEec
Confidence 99999999998777 89999864211 11236889999999998 99999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEEE
Q 013946 181 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 260 (433)
Q Consensus 181 ~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaalv 260 (433)
+++|+|++.||..|+++|++|++|.+||+|+|.+. +. + . |+++.+|+++||||+++|
T Consensus 108 ~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~-----------~-~~~~~~~~~~gdGaaA~v 164 (309)
T 2ebd_A 108 SAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLS-EA----------V-----------D-WEDRSTCVLFGDGAGAVV 164 (309)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GT----------C-----------C-TTCTTTTTTBCEEEEEEE
T ss_pred CccchHHHHHHHHHHHHHHCCCCCEEEEEEecccc-cc----------c-----------C-ccchhhccccccccEEEE
Confidence 99999999999999999999999999999999732 10 0 1 234568999999999999
Q ss_pred ecchHHHHhcCCeEEEEEEEeeeccCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcCCCCCCccEEEec
Q 013946 261 LEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEP-----HPDGV--------GVILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 261 L~~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~-----~~~~~--------~~~~ai~~al~~agl~~~dId~v~~h 324 (433)
|++.+.+ ..+++.+. .+++. +...| .+++. .+.++++++|+++|++++|||||++|
T Consensus 165 L~~~~~~----~~i~~~~~----~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 165 VTRSEDK----SDILATRM----YAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp EEECSSS----CEEEEEEE----EECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred EEecCCC----CceeEEEE----EecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 9987542 23554443 23332 12222 33444 67889999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCc
Q 013946 325 ATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 404 (433)
Q Consensus 325 ~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~ 404 (433)
+++++..| ++.+.|+... -.+.+.|..+||+.+|++++.|.+++. ++.+
T Consensus 237 ~~~~~~~~-----~~~~~lg~~~-~~~~~~~~~~Gh~~~As~~~~L~~~~~---~g~~---------------------- 285 (309)
T 2ebd_A 237 QANVRIIN-----ALAEKLNIPK-EKVFVNIQKYGNTSAASIPIALHEAIK---EGKV---------------------- 285 (309)
T ss_dssp CSCHHHHH-----HHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHHHH---TTCC----------------------
T ss_pred CCCHHHHH-----HHHHHhCCCH-HHhhhhHhhhcchHHHHHHHHHHHHHH---cCCC----------------------
Confidence 99997654 4667777532 123467999999999999999887643 3221
Q ss_pred ccccCccEEEEecccccceeeeeEEc
Q 013946 405 KERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 405 ~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+++++.+||.|.+..+++++
T Consensus 286 ---~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 286 ---KRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ---CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---CCCCEEEEEEEchhhhhEEEEEE
Confidence 11357788999999999999885
No 41
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.97 E-value=4.8e-31 Score=252.41 Aligned_cols=292 Identities=17% Similarity=0.193 Sum_probs=208.8
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAG 100 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~aa 100 (433)
++.|+|+|+..|.. .+.+++++.+. .+ +.+ +. .... |..+. ....++..+|+++|+
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~--------i~-~~~G------i~~r~~~~~~~~~~~l~~~a~ 59 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--TS-----DEW--------IV-TRTG------IRERHIAAPNETVSTMGFEAA 59 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHH--------HH-HHHC------CCEEEECCTTCCHHHHHHHHH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--CC-----HHH--------HH-HHhC------ceEEEecCCCCCHHHHHHHHH
Confidence 58899999999987 46677764321 00 000 00 0000 11111 113456789999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~ 179 (433)
++||+++|+++++++ +|++|+.... ...+..+.+++..||++ +|+++
T Consensus 60 ~~al~~ag~~~~~id-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~~ 107 (317)
T 1hnj_A 60 TRAIEMAGIEKDQIG-------LIVVATTSAT-------------------------HAFPSAACQIQSMLGIKGCPAFD 107 (317)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCeEEe
Confidence 999999999998777 8899986421 11234688999999998 89999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|++|.+||+|+|.+. +. + . |+.+.+|+++||||+++
T Consensus 108 v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~-----------~-~~d~~~~~~~GdGA~A~ 164 (317)
T 1hnj_A 108 VAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-RT----------C-----------D-PTDRGTIIIFGDGAGAA 164 (317)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-HH----------S-----------C-TTCHHHHTTBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhc-cc----------C-----------C-chhcccceeeccccEEE
Confidence 999999999999999999999999999999999732 11 0 0 22233589999999999
Q ss_pred EecchHHHHhcCCeEEEEEEE-eeeccCCCCCCC-----------CCCChH--------HHHHHHHHHHHHcCCCCCCcc
Q 013946 260 LLEELEHAKKRGAKIYAEFRG-GSFTSDAYHMTE-----------PHPDGV--------GVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g-~~~~~d~~~~~~-----------~~~~~~--------~~~~ai~~al~~agl~~~dId 319 (433)
||++.+. ..+++.+.+ .+...+..+... ..+++. .+.++++++|+++|++++|||
T Consensus 165 vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did 239 (317)
T 1hnj_A 165 VLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLD 239 (317)
T ss_dssp EEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred EEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 9998652 357777655 222222222211 113454 678899999999999999999
Q ss_pred EEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCcc
Q 013946 320 YINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 399 (433)
Q Consensus 320 ~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 399 (433)
||++|+++++..| ++.+.|+... -.+.+.|+.+||+.+|+..+.|..++ +.+.+
T Consensus 240 ~v~~H~~~~~~~d-----~i~~~lg~~~-~~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~----------------- 293 (317)
T 1hnj_A 240 WLVPHQANLRIIS-----ATAKKLGMSM-DNVVVTLDRHGNTSAASVPCALDEAV---RDGRI----------------- 293 (317)
T ss_dssp EEEECCSCHHHHH-----HHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCS-----------------
T ss_pred EEEEcCCCHHHHH-----HHHHHcCCCH-HHhHhhHhhhCcHHHHHHHHHHHHHH---HhCCC-----------------
Confidence 9999999998765 4667777542 23568899999999999998876653 33322
Q ss_pred ccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 400 LVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 400 ~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|.+..+++|+
T Consensus 294 --------~~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 294 --------KPGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp --------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------CCCCEEEEEEEchhheeEEEEEE
Confidence 01246788899999888888875
No 42
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.97 E-value=8.6e-31 Score=252.85 Aligned_cols=296 Identities=19% Similarity=0.210 Sum_probs=206.8
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLT 98 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~ 98 (433)
+.++.|+|+|+.+|.. .+.+++|+.+.. + +.|-. .+ . . |..+. ....++..+|+++
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~~--~-----~~~i~----~~-~----G------i~~R~~~~~~~~~~~la~~ 66 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDS--T-----EEWIE----TR-T----G------IRSRRIAEPDETIQVMGVA 66 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSSC--C-----HHHHH----HH-H----C------CSEEECCCTTCCHHHHHHH
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhCC--C-----HHHHH----Hh-c----C------ceEEEEeCCCCCHHHHHHH
Confidence 3679999999999998 567777654321 0 00000 00 0 0 11111 1123457899999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~ 177 (433)
|+++||+++|+++++++ +|++|+..+.+ .....+.+++..||++ +|+
T Consensus 67 Aa~~al~~ag~~~~~id-------~vi~gt~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~ 114 (339)
T 1mzj_A 67 ASRRALEHAGVDPAEID-------LVVVSTMTNFV-------------------------HTPPLSVAIAHELGADNAGG 114 (339)
T ss_dssp HHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------CSSCHHHHHHHHHTCTTCEE
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHHHHHhCCCCccE
Confidence 99999999999998777 89999865321 1122678999999998 699
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|++|.+||+|+|.+ ++. +. ++.+.+|+++||||+
T Consensus 115 ~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~ 171 (339)
T 1mzj_A 115 FDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------ID------------LADRSLSFLFGDGAG 171 (339)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------SC------------SSCTTTTTTBCEEEE
T ss_pred EEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------cC------------ccccccceEeccCce
Confidence 9999999999999999999999999999999999983 231 11 123467999999999
Q ss_pred EEEecchHHHHhcCCeEEEEE-EEeeeccCCCCCC--CC-------------CCCh--------HHHHHHHHHHHHHcCC
Q 013946 258 VLLLEELEHAKKRGAKIYAEF-RGGSFTSDAYHMT--EP-------------HPDG--------VGVILCIEKALAHSGV 313 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~--~~-------------~~~~--------~~~~~ai~~al~~agl 313 (433)
++||++.+. ..+++.. .+.+...+..+.. .| ..++ ..+.++++++|+++|+
T Consensus 172 A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl 246 (339)
T 1mzj_A 172 AAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGL 246 (339)
T ss_dssp EEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999997642 3344432 2222222211111 01 1123 5678899999999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
+++|||||++|+++++.+|. +.+.|+-...-.+......+||+.+|+..+.|.+++ +.+.+
T Consensus 247 ~~~did~v~~H~~~~~~~d~-----i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~---~~g~~----------- 307 (339)
T 1mzj_A 247 TVGDLVAFVPHQANLRIIDV-----LVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLV---RSGAV----------- 307 (339)
T ss_dssp CGGGCSEEEECCSCHHHHHH-----HHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHH---HHTSS-----------
T ss_pred CHHHCCEEEECCCCHHHHHH-----HHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHH---HcCCC-----------
Confidence 99999999999999987774 556676432202223457899999999988876553 44332
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.+++++.+||.|.+..+++|+-
T Consensus 308 --------------~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 308 --------------PGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCCEEEEEEEchhheeEEEEEEe
Confidence 123578889999999999999863
No 43
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.97 E-value=1.9e-30 Score=247.78 Aligned_cols=247 Identities=15% Similarity=0.211 Sum_probs=184.8
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
.+..+|+++|+++||+++|++++++| +|++|+..++. . .+..+.+++.
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-------~vi~~~~~~~~--------------------~-----~~~~a~~v~~ 96 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID-------MIIVATATGDM--------------------P-----FPTVANMLQE 96 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSC--------------------S-----SSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCCC--------------------C-----CCcHHHHHHH
Confidence 34678999999999999999998777 89999864211 1 1235789999
Q ss_pred HhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC
Q 013946 170 DLGWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 248 (433)
Q Consensus 170 ~lgl~-Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~ 248 (433)
.+|++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+... .+|+|. .+
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~----------------------~~~~d~-~~ 153 (313)
T 1zow_A 97 RLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI----------------------TDLTDR-ST 153 (313)
T ss_dssp HHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT----------------------CCTTCH-HH
T ss_pred HhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc----------------------cCcccc-cc
Confidence 99998 5999999999999999999999999999999999999973211 134442 36
Q ss_pred CcccccceeEEEecchHHHHhcCCeEEEE-EEEeeeccCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCCC
Q 013946 249 GFVMGEGAGVLLLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTEP----HPDG--------VGVILCIEKALAHSGVSR 315 (433)
Q Consensus 249 G~~~geGaaalvL~~~~~A~~~g~~i~a~-i~g~~~~~d~~~~~~~----~~~~--------~~~~~ai~~al~~agl~~ 315 (433)
|+++||||+++||++.+. +..+++. +.+.+...+..+...+ .+++ ..+.++++++|+++|+++
T Consensus 154 ~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~ 229 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTS 229 (313)
T ss_dssp HTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred eeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 899999999999997653 3455543 3333322222222111 1233 267789999999999999
Q ss_pred CCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCC
Q 013946 316 EDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 394 (433)
Q Consensus 316 ~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~ 394 (433)
+|||||++|+++++..|. +.+.|+-.. +++ ..|..+||+.+|++++.|..++ +++.+
T Consensus 230 ~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~------------ 287 (313)
T 1zow_A 230 DDIDLFIPHQANIRIMES-----ARERLGISKDKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL------------ 287 (313)
T ss_dssp GGCSEEEECCSCHHHHHH-----HHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC------------
T ss_pred HHCCEEEEcCCCHHHHHH-----HHHHhCCCHHHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC------------
Confidence 999999999999987775 455666432 233 4699999999999999887653 33321
Q ss_pred CCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 395 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+++++.+||.|.+..+++|+
T Consensus 288 -------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 -------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp -------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------CCCCEEEEEEEchhhhheEEEEE
Confidence 12367889999999999999886
No 44
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.96 E-value=8.4e-29 Score=238.68 Aligned_cols=296 Identities=18% Similarity=0.242 Sum_probs=202.3
Q ss_pred CCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHH
Q 013946 21 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLT 98 (433)
Q Consensus 21 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~-~~~~~~~~~l~l~ 98 (433)
|.++.|+|+|+..|.. .+.+++|+.+.. + +.| +... .-|..+. ....++..+|+++
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~------------i~~~---~gi~~r~~~~~~~~~~~la~~ 67 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDS--S-----DEW------------IYTR---TGIKTRRFAADDESAASMATE 67 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSC--C-----HHH------------HHHH---HCCSEEEECCTTCCHHHHHHH
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCC--C-----HHH------------HHHh---cCCceEeecCCCCCHHHHHHH
Confidence 5679999999999987 567777653311 0 000 0000 0011111 1123457899999
Q ss_pred HHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCc
Q 013946 99 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPN 177 (433)
Q Consensus 99 aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~ 177 (433)
|+++||+++|+++++|| +|++++..+++ ..+..+.+++..||++ +|+
T Consensus 68 A~~~al~~ag~~~~~id-------~vi~~t~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~ 115 (335)
T 1u6e_A 68 ACRRALSNAGLSAADID-------GVIVTTNTHFL-------------------------QTPPAAPMVAASLGAKGILG 115 (335)
T ss_dssp HHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------SSSCHHHHHHHHHTCTTSEE
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCChHHHHHHHHhCCCCCcE
Confidence 99999999999998777 89999864311 1124678999999998 599
Q ss_pred ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccccee
Q 013946 178 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 257 (433)
Q Consensus 178 ~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaa 257 (433)
++|+++|+|++.||..|+++|++|++|.+||+|+|.+. + ..+|+| ..+++++||||+
T Consensus 116 ~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~---------------------~~~~~d-~~~~~~~gDGA~ 172 (335)
T 1u6e_A 116 FDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLS-P---------------------TIDMYD-RGNCFIFADGAA 172 (335)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECG-G---------------------GCCTTC-TTTTTTBCEEEE
T ss_pred eeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccc-c---------------------ccCccc-cccceEeccccE
Confidence 99999999999999999999999999999999999842 1 123444 348999999999
Q ss_pred EEEecchHHHHhcCCeEEEEEEEe-eeccCCCCCC---------------CCCCCh--------HHHHHHHHHHHHHcCC
Q 013946 258 VLLLEELEHAKKRGAKIYAEFRGG-SFTSDAYHMT---------------EPHPDG--------VGVILCIEKALAHSGV 313 (433)
Q Consensus 258 alvL~~~~~A~~~g~~i~a~i~g~-~~~~d~~~~~---------------~~~~~~--------~~~~~ai~~al~~agl 313 (433)
++||++.+. ++ ++.++.+. +...+..+.. ....++ ..+.++++++|+++|+
T Consensus 173 A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl 247 (335)
T 1u6e_A 173 AVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGV 247 (335)
T ss_dssp EEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999997653 22 33333332 1111111000 011122 3567899999999999
Q ss_pred CCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 314 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 314 ~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
+++|||||++|+++++..|. +.+.|+-...-.+...+..+||+.+|+..+.|..+ ++.+.+
T Consensus 248 ~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~~----------- 308 (335)
T 1u6e_A 248 RPDQIDVFVPHQANSRINEL-----LVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL---LTTGAA----------- 308 (335)
T ss_dssp CGGGCCEEEECCSCHHHHHH-----HHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---HHHTSS-----------
T ss_pred CHHHCCEEEECCCCHHHHHH-----HHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---HHcCCC-----------
Confidence 99999999999999987665 45566643221233347889999999865433222 222111
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.+++++++||+|++++++||+-
T Consensus 309 --------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 --------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 124688999999999999999874
No 45
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.95 E-value=7.7e-28 Score=231.40 Aligned_cols=289 Identities=19% Similarity=0.225 Sum_probs=202.4
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
.++.|+|+|+..|.. .+.+++++.+.. + +.|-. .+ . . |..+.....++..+|+++|+
T Consensus 4 m~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~i~----~~-~----G------i~~R~~~~~~~~~~la~~Aa 61 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAVLSNDMLAAELDT--S-----DAWIS----SR-T----G------VRQRHIAGDLGSGDLALRAA 61 (331)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTC--C-----HHHHH----HH-H----C------CCEEECCTTCCHHHHHHHHH
T ss_pred ceeEEEEEEEECCCcEecHHHHHHHhCC--C-----HHHHH----Hh-h----C------ceEEEecCCCCHHHHHHHHH
Confidence 368999999999998 577778766421 1 00000 00 0 0 11111111156789999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~ 179 (433)
++||+++|+ ++++ .|++++..+. ...+..+.+++..||++ +|+++
T Consensus 62 ~~al~~ag~--~~id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lgl~~~~~~~ 107 (331)
T 2x3e_A 62 SAALASAGL--ERVD-------AVVLATSTGD-------------------------FCCPATAPRVAARLGLVGALAFD 107 (331)
T ss_dssp HHHHHHHTC--SCCS-------EEEEECSSCS-------------------------EEESCSHHHHHHHTTCTTSEEEE
T ss_pred HHHHHhCCc--ccCC-------EEEEEeCCCC-------------------------CCCChHHHHHHHHhCCCCCcEEE
Confidence 999999999 5565 7888876421 11123578999999998 79999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|++|.+||+|+|.+ ++. +. +++..+++++||||+++
T Consensus 108 v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~A~ 164 (331)
T 2x3e_A 108 LSAAATGFVYGLASVGSLISAGLADSALLVGVDTF-SHT----------LD------------PADRSTRALFGDGAGAV 164 (331)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGG----------SC------------TTCHHHHHHBCCEEEEE
T ss_pred EcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecc-ccC----------CC------------ccccccceeeccccEEE
Confidence 99999999999999999999999999999999983 221 00 12234689999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCC---CCCCC----------------CCCh--------HHHHHHHHHHHHHcC
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEP----------------HPDG--------VGVILCIEKALAHSG 312 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~----------------~~~~--------~~~~~ai~~al~~ag 312 (433)
||++.+.+ ++..+++.. ..+++. ....| ..++ ..+.++++++|+++|
T Consensus 165 vL~~~~~a--~~~~i~~~~----~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~ag 238 (331)
T 2x3e_A 165 VLRAGDAE--EEGALLAFD----LGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVG 238 (331)
T ss_dssp EEEEECTT--STTBEEEEE----EEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCC--CCCceEEEE----EEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99987644 344555443 222322 11111 1123 567889999999999
Q ss_pred CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCC
Q 013946 313 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 391 (433)
Q Consensus 313 l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~ 391 (433)
++++|||||++|+++++..|. +.+.|+-. .+++ ..+..+||+.+|+..+.|..+ ++.+.+
T Consensus 239 l~~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~--~~~~~~Gnt~sAs~~~~L~~~---~~~~~~--------- 299 (331)
T 2x3e_A 239 WQASDLHHLVPHQANTRILAA-----VADQLDLPVERVV--SNIAEVGNTVAASIPLALAHG---LRQGIL--------- 299 (331)
T ss_dssp CCGGGCSEEEECCCCHHHHHH-----HHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCS---------
T ss_pred CCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCHHHHh--hhHhhhCcHHHHHHHHHHHHH---HHhCCC---------
Confidence 999999999999999987764 55666643 1233 245789999999988776654 333322
Q ss_pred CCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 392 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|.+..+++|+
T Consensus 300 ----------------~~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 300 ----------------RDGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp ----------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------CCCCEEEEEEEeHHhhheeeEEE
Confidence 12357888999999999999885
No 46
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.95 E-value=2.9e-28 Score=238.61 Aligned_cols=310 Identities=14% Similarity=0.099 Sum_probs=207.9
Q ss_pred EEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCC-----CCCCCCcc-ccccccCCCCCCCCChhhhhcCCHHHHHH
Q 013946 24 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETF-----DCTSFPTK-IAAEIKSFSTDGWVAPKLSKRMDKFMLYL 96 (433)
Q Consensus 24 v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~-----~~~~~~~~-~~~~i~~~~~~~~i~~~~~~~~~~~~~l~ 96 (433)
+.|+|+|+..|.. .+.+++|+.+......... +++ ...+...+ +....+.|+..+-++++.....++..+|+
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la 88 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV 88 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence 7899999999987 6888888877543100000 000 00111111 11111112211112334433345678999
Q ss_pred HHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC-
Q 013946 97 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG- 175 (433)
Q Consensus 97 l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G- 175 (433)
++|+++||+++|+++++|+ .|++++..+ +. ....+.+++..||+++
T Consensus 89 ~~Aa~~aL~~agl~~~~id-------~vi~~t~~~---------------------~~-----~p~~a~~v~~~lGl~~~ 135 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDID-------VIIYVSCTG---------------------FM-----MPSLTAWLINEMGFDST 135 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------CC-----SSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCHHHCC-------EEEEEecCC---------------------CC-----CCcHHHHHHHHhCCCCC
Confidence 9999999999999998777 788887531 11 1245789999999998
Q ss_pred -Cccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCC----C
Q 013946 176 -PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD----G 249 (433)
Q Consensus 176 -p~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~----G 249 (433)
|+++| +++|+|++.||..|+++|++|.+|.+||+|+|.+ ++. .+|+|.+++ +
T Consensus 136 ~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~---------------------~~~~d~~~~~~~~~ 193 (382)
T 1u0m_A 136 TRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SLC---------------------YQPTDLGVGSLLCN 193 (382)
T ss_dssp CEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GGG---------------------CCTTCCSHHHHHHH
T ss_pred cceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh---------------------cCcccCCHHHhhcc
Confidence 88999 8999999999999999999999999999999973 221 134444333 8
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeee--ccCCCC----------------CCCCCCChHHHHHHHHHHHHHc
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--TSDAYH----------------MTEPHPDGVGVILCIEKALAHS 311 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~--~~d~~~----------------~~~~~~~~~~~~~ai~~al~~a 311 (433)
+++||||+|+||++.+. ++. +|.++.. ..++.+ ...+......+. +++++|+++
T Consensus 194 ~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~a 265 (382)
T 1u0m_A 194 GLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEH 265 (382)
T ss_dssp HHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTT
T ss_pred chhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHc
Confidence 99999999999997543 232 4455433 233321 011122245677 999999999
Q ss_pred CCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc-ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCC
Q 013946 312 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 389 (433)
Q Consensus 312 gl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~ 389 (433)
|++++|||||++|+++++..|. +.+.++-. .++++ .+.+..+||+.+|+..+.|..++ +.+.+.
T Consensus 266 gl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~------ 331 (382)
T 1u0m_A 266 GWDASDLDFYIVHAGGPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE------ 331 (382)
T ss_dssp SCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC------
T ss_pred CCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC------
Confidence 9999999999999999987664 44556543 12332 25678899999999877776554 333220
Q ss_pred CCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 390 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+.+.++..+||.|.+..+++|+
T Consensus 332 -------------------~Gd~vll~~~G~G~t~~~~vl~ 353 (382)
T 1u0m_A 332 -------------------EGARGLLAGFGPGITAEMSLGC 353 (382)
T ss_dssp -------------------SSCCCEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCEEEEEEEcccceeEEEEEE
Confidence 1245677899998888888875
No 47
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=99.95 E-value=1.8e-28 Score=247.44 Aligned_cols=307 Identities=13% Similarity=0.087 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+|||++++++++. -.|+++....... .+...........+..++..+|
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd~v---I~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~va~~lG 102 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVARA---IDTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSVARNIG 102 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHH---CCEEEECCC-------------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcCHHHcceE---EEEEeeccccccc-----------------chhhhhhccccCHHHHHHHHcC
Confidence 4588999999999999999877632 1144443321000 0001112233455778999999
Q ss_pred CCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHH-----------------------------
Q 013946 173 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGG----------------------------- 222 (433)
Q Consensus 173 l~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~----------------------------- 222 (433)
+.+ +.++++.+|+|++.+|..|++.|++|++|++|+||+|.+.+...+..
T Consensus 103 l~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 182 (520)
T 4egv_A 103 ADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEY 182 (520)
T ss_dssp CCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CT
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHH
Confidence 987 67788999999999999999999999999999999998643211000
Q ss_pred --------------HHHhhhhhcCC----------------------CCCCCC--------------------CccccCC
Q 013946 223 --------------FVACRALSQRN----------------------NDPTKA--------------------SRPWDIN 246 (433)
Q Consensus 223 --------------~~~~~~ls~~~----------------------~~~~~~--------------------~~pfd~~ 246 (433)
+.......... .+|+.. +.|+...
T Consensus 183 ~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta 262 (520)
T 4egv_A 183 TIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRL 262 (520)
T ss_dssp TGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGG
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccc
Confidence 00000000000 011111 1223233
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCC--CCCCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY--HMTEPH-PDGVGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~--~~~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
.|+..++|||+++||.+++.|++.|.++++.|.+++...... ....+. ....+...+++++|+++|++++|||++|+
T Consensus 263 ~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 263 MVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp GCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred cccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 466678999999999999999999999888887776554322 112222 23567889999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHcC----CCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCCc-
Q 013946 324 HATSTPAGDIKEYQALIHCFGQ----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN- 398 (433)
Q Consensus 324 h~~gt~~~D~~E~~al~~~~~~----~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~- 398 (433)
|..++ ++..+..+.+|- ..++++++.+.++||+++++|+..+++++++||++..+..++ .+++.+++.
T Consensus 343 ~dAF~-----~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~ 415 (520)
T 4egv_A 343 YSCFP-----FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKY 415 (520)
T ss_dssp CCSSS-----HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEE
T ss_pred eCCcH-----HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeee
Confidence 98776 344555555553 246889999999999999999999999999999998877665 466666653
Q ss_pred --cccCCcccccC----ccEEEEecccccceeeeeEEcc
Q 013946 399 --VLVGPKKERLE----VKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 399 --~~~~~~~~~~~----~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+....++++|+ ++++.+++ .|+|+++++
T Consensus 416 ~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~ 449 (520)
T 4egv_A 416 SVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITE 449 (520)
T ss_dssp EEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCS
T ss_pred eEEEEcCCCCCCCCCCCCccccccc-----CCCCccccc
Confidence 22333444453 34454444 788888765
No 48
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.94 E-value=6e-27 Score=256.22 Aligned_cols=330 Identities=12% Similarity=0.072 Sum_probs=221.0
Q ss_pred CCCCCEEEEecceecCcC-------------CCHHHHHHHH------HcCCCCceeCCCCCCCCCCccccccccCCCCCC
Q 013946 19 MKQKRVVVTGMGLVSPLG-------------HEPDVFYNNL------LEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 79 (433)
Q Consensus 19 ~~~~~v~ItG~g~~~p~g-------------~~~~~~~~~l------~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 79 (433)
+.+.++.|+|+|..+|.+ .+.+++|+.+ ..+++++.+...++...+... .+++..
T Consensus 599 ~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~------~~~~~~ 672 (979)
T 3tsy_A 599 RAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEE------HPNIGA 672 (979)
T ss_dssp SCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHH------CHHHHS
T ss_pred cccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhc------Cccccc
Confidence 445689999999999998 3334444444 445566655433322111000 111112
Q ss_pred CC----ChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcc
Q 013946 80 WV----APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCV 155 (433)
Q Consensus 80 ~i----~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (433)
++ ..+..+..+....|+++|+++||++||+++++|| .|+++++.+
T Consensus 673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-------~ii~~t~~~------------------------ 721 (979)
T 3tsy_A 673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-------HLVFCTTSG------------------------ 721 (979)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC------------------------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEEeeCC------------------------
Confidence 22 2333344445677999999999999999999887 788887431
Q ss_pred cccccchHHHHHHHHhCCCCCc---ceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcC
Q 013946 156 PFATTNMGSAMLAMDLGWMGPN---YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 232 (433)
Q Consensus 156 ~~~~~~~~a~~ia~~lgl~Gp~---~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~ 232 (433)
...+..+..++..||++++. +.++++|+|++.||..|.++|++|.++.|||+|+|......
T Consensus 722 --~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~-------------- 785 (979)
T 3tsy_A 722 --VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF-------------- 785 (979)
T ss_dssp --CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC--------------
T ss_pred --CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe--------------
Confidence 11235688999999998754 89999999999999999999999999999999999732110
Q ss_pred CCCCCCCCccccCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCCCCCC----------------
Q 013946 233 NNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD---------------- 296 (433)
Q Consensus 233 ~~~~~~~~~pfd~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~---------------- 296 (433)
.....++++...+++++||||+|+||++.+.+..++..++....+.....+..+...+.+.
T Consensus 786 ---~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 862 (979)
T 3tsy_A 786 ---RGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLI 862 (979)
T ss_dssp ---CCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred ---eCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHH
Confidence 0011122333335689999999999998776655667777777777665554433222111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
...+.++++++|+++|++++||||++.|..+++..|. +.+.++-. .++..+ .....+||+.+||=.+.|..+.
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~-----~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDA-----VEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHH-----HHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHH-----HHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 1236789999999999999999999999988875544 44445432 122221 2345679999999888777765
Q ss_pred HHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 375 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 375 ~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
..++.|.. + .........+..+||.|-+..+++++
T Consensus 938 ~~~~~G~~------------------v---~~g~~~~~~ll~~~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 938 KKSLKGER------------------A---TTGEGLDWGVLFGFGPGLTIETVVLH 972 (979)
T ss_dssp HHHHHTTC------------------S---BTTTTCSEEEEEEECGGGEEEEEEEE
T ss_pred hhhccccc------------------c---cCCCCcceeEEEEeCCchHHHHHHHH
Confidence 54443211 0 01112456788899998888888876
No 49
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.94 E-value=6.9e-26 Score=221.45 Aligned_cols=308 Identities=13% Similarity=0.084 Sum_probs=208.4
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCC----------------CCceeCCCCCCCCCCccccccccCCCCCCC-CCh
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGV----------------SGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAP 83 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~----------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-i~~ 83 (433)
.++.|+|+|+..|.. .+.+++|+.+.... +++... ++.... ..+++.++ .+.
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R-~~~~~~---------~~~~~~~~~~~~ 81 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTR-HLVRDY---------TKPENSIKFRHL 81 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEE-CCSSCT---------TSGGGCGGGGGG
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcc-eeecCc---------cccccccccCCh
Confidence 368999999999998 57888998775321 222210 000000 02333322 233
Q ss_pred hhhhcC-----CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCccccc
Q 013946 84 KLSKRM-----DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFA 158 (433)
Q Consensus 84 ~~~~~~-----~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (433)
.+...+ ++..+|+++|+++||+++|+++++|| .|++++..+ +.
T Consensus 82 ~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id-------~vi~~t~~~---------------------~~---- 129 (374)
T 2h84_A 82 ETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT-------HIVSVTSTG---------------------II---- 129 (374)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------CC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------CC----
Confidence 333334 77899999999999999999998887 788887641 11
Q ss_pred ccchHHHHHHHHhCCCC--Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCC
Q 013946 159 TTNMGSAMLAMDLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND 235 (433)
Q Consensus 159 ~~~~~a~~ia~~lgl~G--p~~~v~-~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~ 235 (433)
....+.+++..||+++ |++.|+ ++|+|++.||..|+++|++|++|.+||+|+|.+. +..
T Consensus 130 -~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~~---------------- 191 (374)
T 2h84_A 130 -IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LHF---------------- 191 (374)
T ss_dssp -SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GGC----------------
T ss_pred -CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hhh----------------
Confidence 1235789999999997 789996 8999999999999999999999999999999842 110
Q ss_pred CCCCCccccCC--CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeecc--CCCCC-------C-------CCCC--
Q 013946 236 PTKASRPWDIN--RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAYHM-------T-------EPHP-- 295 (433)
Q Consensus 236 ~~~~~~pfd~~--~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~--d~~~~-------~-------~~~~-- 295 (433)
..|.|.+ .+++++||||+|+||++.+.+..++ ++ ++.+.+... ++... . ...+
T Consensus 192 ----~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 264 (374)
T 2h84_A 192 ----SNTDGGDQMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIV 264 (374)
T ss_dssp ----CCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHH
T ss_pred ----cCCCCHHHHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHH
Confidence 0112211 1488999999999999876543222 44 666655431 11100 0 0001
Q ss_pred ChHHHHHHHHHHHHHcC------CCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHH
Q 013946 296 DGVGVILCIEKALAHSG------VSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGA 367 (433)
Q Consensus 296 ~~~~~~~ai~~al~~ag------l~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~ 367 (433)
....+.++++++|+++| ++++||||| +|+++++..|. +.+.++-. .+++++ .....+||+.+|+-.
T Consensus 265 ~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~ 338 (374)
T 2h84_A 265 IGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMN-----IENSLGIDPKQTKNTWDVYHAYGNMSSASVI 338 (374)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHH-----HHHHTTCCGGGGHHHHHHHHHHCBCTTHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHH
Confidence 12457789999999999 999999999 99999986654 44555533 233332 456778999988876
Q ss_pred HHHHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 368 VEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 368 ~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+.|..++ +.+. +.+.++..+||.|-+..+++|+..
T Consensus 339 ~~L~~~~---~~~~---------------------------~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 339 FVMDHAR---KSKS---------------------------LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp HHHHHHH---TCSC---------------------------CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHH---hhcC---------------------------CCCeEEEEEeccchhhhhhhheec
Confidence 6665543 2211 235677789998888888888754
No 50
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.93 E-value=5.3e-25 Score=216.28 Aligned_cols=253 Identities=14% Similarity=0.136 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+++|+++||+++|+++++|| .|++++... +. ....+.+++..
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~---------------------~~-----~p~~a~~v~~~ 158 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG---------------------FI-----APGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC---------------------CC-----SSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------Cc-----cChHHHHHHHH
Confidence 5678999999999999999998777 778887531 11 12457899999
Q ss_pred hCCCCC--ccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMGP--NYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~Gp--~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
||++++ ++.+ +++|+|++.||..|+++|++|.+|.+||+|+|.+.... . |+.++
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~----------------------~-~~~~r 215 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA----------------------V-FADDI 215 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC----------------------C-CCSSH
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC----------------------C-CCCCH
Confidence 999875 5777 89999999999999999999999999999999843110 0 23334
Q ss_pred C----CcccccceeEEEecchHHHHhcCCeEEEEEEEeeec--cCCCCC--------------CC--CCCChHHHHHHHH
Q 013946 248 D----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--SDAYHM--------------TE--PHPDGVGVILCIE 305 (433)
Q Consensus 248 ~----G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~--~d~~~~--------------~~--~~~~~~~~~~ai~ 305 (433)
+ ++++||||+|+||++.+.+..++. .+++|.+++.. .++... .. +......+.++++
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~ 294 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 294 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHH
Confidence 3 899999999999997654422333 45678876544 454321 00 1112346778999
Q ss_pred HHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCccc-ccchhhhhhHhhhHHHHHHHHHHHHHHcCCcC
Q 013946 306 KALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIH 383 (433)
Q Consensus 306 ~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ip 383 (433)
++|+++|++++|||||+.|+++++..|.+ .+.++-. .++.+ ......+||+.+|+-.+.|..++ +.+.+
T Consensus 295 ~aL~~agl~~~dId~~~~H~~~~~i~d~~-----~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~- 365 (393)
T 1ted_A 295 EMLWDNGLQISDIDLWAIHPGGPKIIEQS-----VRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAES- 365 (393)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHHHHHHH-----HHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSS-
T ss_pred HHHHHcCCCHhHCCEEEECCCcHHHHHHH-----HHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCcc-
Confidence 99999999999999999999999876644 3445532 12332 24567789999888666554332 33221
Q ss_pred CCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 384 PNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 384 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
+ .+.+.++..+||.|.+..+++|+..
T Consensus 366 ----------------------~-~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 366 ----------------------A-KAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp ----------------------S-SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------C-CCCCeEEEEEeccchhhhhhheeec
Confidence 0 1246788899999999999988753
No 51
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.92 E-value=8.2e-24 Score=204.17 Aligned_cols=314 Identities=17% Similarity=0.142 Sum_probs=208.7
Q ss_pred CCCCCCEEEEecceecCcC-CCHHHHHHHHHc-----CCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCH
Q 013946 18 HMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLE-----GVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDK 91 (433)
Q Consensus 18 ~~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~-----g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~ 91 (433)
.|+.+++.|+|+|...|.- .+.+++.+.+.. +.+. ..+ ....+...+ +....-..
T Consensus 7 ~m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~-~~i--~~~tGi~~R----------------~~~~~~~~ 67 (345)
T 3s21_A 7 HMLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKT-DVL--GDVAGIHAR----------------RLWDQDVQ 67 (345)
T ss_dssp GGSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCC-CHH--HHTTCCSEE----------------EECSSCCC
T ss_pred cceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCH-HHH--HHhhCceeE----------------EECCCCCC
Confidence 3556789999999999997 577777776521 2110 000 000011000 00011123
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++... ....+..+.+++..+
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id-------~vi~~t~~~-------------------------~~~~p~~a~~v~~~l 115 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIG-------LLINTSVSR-------------------------DYLEPSTASIVSGNL 115 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEECCSCC-------------------------SCSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC-------------------------CCCCChHHHHHHHHh
Confidence 578999999999999999999888 789987641 111234588999999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|++ .|+++|+++|+|++.||..|+++|++|+++.+||+|+|.+.....+ ...+.++ +...|+||+.+..+
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~---~~~~~~~-----~~~~~~~f~~~~~~ 187 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEK---TLERMTS-----PDVTEEEFRNELAA 187 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHH---HHHHHTC-----TTCCHHHHHHHHGG
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcc---ccccccC-----Cccchhhhhhhccc
Confidence 996 6899999999999999999999999999999999999986433211 1222222 33467899988899
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCC-------CCCChH--------HHHHHHHHHHHHcCCC
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------PHPDGV--------GVILCIEKALAHSGVS 314 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------~~~~~~--------~~~~ai~~al~~agl~ 314 (433)
+++||||+|+||++.+... .+. .|.+.....++..... ...++. .+.++++++|+++|++
T Consensus 188 ~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~ 262 (345)
T 3s21_A 188 LTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWA 262 (345)
T ss_dssp GGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999865321 122 3444444333321110 111222 3446789999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
++|||++..|..+... .+.+.+.++-.. +++ ..-..+||+.+|+-.+.|..++ +.|.+
T Consensus 263 ~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~----------- 321 (345)
T 3s21_A 263 VEELDQFVIHQVSRPH-----TAAFVKSFGIDPAKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRL----------- 321 (345)
T ss_dssp GGGCSEEEECCSCHHH-----HHHHHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCC-----------
T ss_pred HHHCCEEEeCCCCHHH-----HHHHHHHcCcCHHHce--eeHhhcCchHHHHHHHHHHHHH---HcCCC-----------
Confidence 9999999999766653 345555565331 222 3335789999998777665543 34332
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+-+.++..+||.|-+..+++|+
T Consensus 322 --------------~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 322 --------------KKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCCCEEEEEEEChhhhheEEEEE
Confidence 01246777899998888888775
No 52
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.91 E-value=3.2e-23 Score=199.14 Aligned_cols=293 Identities=16% Similarity=0.221 Sum_probs=195.3
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
++.|+|+|+..|.. .+.+++|+.+.+.. +...+.|-. .+. .+.. +.....-.+...|+.+|++
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~~~~~~i~----~rt--gi~~--------r~~~~~~~~~~~la~~Aa~ 74 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IETSDEWIV----ART--GIHA--------RYFAEPDVTTSDLAFIASQ 74 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHH----HHH--CCSE--------EEECCTTCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CCCCHHHhH----Hhc--CceE--------EEEcCCCCCHHHHHHHHHH
Confidence 79999999999997 68899998874311 110000000 000 0000 0000111346789999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCC--CCCcce
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW--MGPNYS 179 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~~ 179 (433)
+||+++|+++++|| .|++++..+. ...+..+.+++..+|+ +.|+++
T Consensus 75 ~al~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lgl~~~~~~~~ 122 (333)
T 4dfe_A 75 RAIEAADIDPQSID-------LIIVATSTPD-------------------------FVFPSTACLLQNKLGIRNHGAAFD 122 (333)
T ss_dssp HHHHHHTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHTTCCSCCEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHhCCCCCCcEEE
Confidence 99999999999887 8999886421 1123458899999999 569999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+++|+|++.||..|+++|++|+++.+||+|+|.+.... -|+.+..++++||||+|+
T Consensus 123 v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~~~d~~~~~lfGDGA~A~ 179 (333)
T 4dfe_A 123 VQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------------------DFKDRTTCVLFGDGAGAV 179 (333)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------CTTCTTTTTTBCEEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------------------CcccccceeeeccccEEE
Confidence 999999999999999999999999999999999842111 022334678999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeeccCCCC---CC--------------CCCCCh--------HHHHHHHHHHHHHcCCC
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTSDAYH---MT--------------EPHPDG--------VGVILCIEKALAHSGVS 314 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~--------------~~~~~~--------~~~~~ai~~al~~agl~ 314 (433)
||++.+ +..+. ++...+++.. .. ....++ ..+.++++++|+++|++
T Consensus 180 vl~~~~-----~~~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~ 250 (333)
T 4dfe_A 180 ILQASD-----EPGVL----ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLS 250 (333)
T ss_dssp EEEEES-----SCSEE----EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEEcC-----CCCeE----EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999754 12222 2222222210 00 001122 45668899999999999
Q ss_pred CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCC
Q 013946 315 REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 393 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~ 393 (433)
++||||+.+|..+.+ -.+++.+.++-.. ++. .....+||+.+|+=.+.|..+ ++.+.+
T Consensus 251 ~~did~~~~Hq~~~~-----i~~~~~~~lgl~~~~~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~----------- 309 (333)
T 4dfe_A 251 AEQIDWLIPHQANIR-----IMQSTCRKLGLPQERMI--VTVGEHGNTSAASIPLALDVA---VRDGRI----------- 309 (333)
T ss_dssp GGGCSEEEECCSCHH-----HHHHHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCS-----------
T ss_pred HHHCCEEEEcCCCHH-----HHHHHHHHhCCCHHHhh--hhHHhcCchHHHHHHHHHHHH---HHcCCC-----------
Confidence 999999999977665 3455555565331 222 245678999999866655543 334332
Q ss_pred CCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 394 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|-+..+++++
T Consensus 310 --------------~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 310 --------------KRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCCCEEEEEEEchhheeEEEEEE
Confidence 11246677889999888888875
No 53
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.86 E-value=5e-21 Score=188.60 Aligned_cols=265 Identities=13% Similarity=0.091 Sum_probs=181.6
Q ss_pred hhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccch
Q 013946 83 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNM 162 (433)
Q Consensus 83 ~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (433)
.+..........|+.+|+++||+++|+++++|| .|++++..+ ...+.
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~--------------------------~~~p~ 152 (406)
T 2d3m_A 106 DRQDICVPGVPALGTEAAVKAIEEWGRPKSEIT-------HLVFCTSCG--------------------------VDMPS 152 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CEESC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------CCCCC
Confidence 344444567789999999999999999998887 788887531 11234
Q ss_pred HHHHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCC
Q 013946 163 GSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKA 239 (433)
Q Consensus 163 ~a~~ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 239 (433)
.+.+++..+|++++ +++++.+|+|++.||..|.++|++|.++.+||+|+|.+... .
T Consensus 153 ~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~E~~s~~---------------------~ 211 (406)
T 2d3m_A 153 ADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLAENNRGARVLVVCAELTIMM---------------------L 211 (406)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGT---------------------C
T ss_pred HHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchh---------------------e
Confidence 57899999999875 78899999999999999999999999999999999973210 0
Q ss_pred CccccCC----CCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCC------------CC--C--CCCC
Q 013946 240 SRPWDIN----RDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYH------------MT--E--PHPD 296 (433)
Q Consensus 240 ~~pfd~~----~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~------------~~--~--~~~~ 296 (433)
..|+|.+ ..++++||||+|+||++.+.. + ...+.++.+.+... +... .. . +...
T Consensus 212 ~~~~d~~~~~~~~~~lfGDGAaA~vL~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 288 (406)
T 2d3m_A 212 RAPNETHLDNAIGISLFGDGAAALIIGSDPII---GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTI 288 (406)
T ss_dssp CCCCSTTHHHHHHHTTBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHH
T ss_pred eCCcccchhhhhccceeccceEEEEEecCCCC---ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHHHH
Confidence 1122221 247899999999999875431 2 11124566554321 1000 00 0 0001
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccE----EEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNY----INAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEA 370 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~----v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l 370 (433)
...+.++++++|+++|++++ ||+ |..|..+++..| ++.+.++-. .++..+ .....+||+.+|+-.+.|
T Consensus 289 ~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~~~i~~-----~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L 362 (406)
T 2d3m_A 289 SNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPGGRAILD-----QVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYIL 362 (406)
T ss_dssp HHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSCHHHHH-----HHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCC-CCccceEEEECCCCHHHHH-----HHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHH
Confidence 23567899999999999999 999 999999887654 345556543 234443 567889999999987777
Q ss_pred HHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 371 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 371 ~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..++.. +. .|. ...+. ...+.++..+||.|-+..+++|+.
T Consensus 363 ~~~~~~---g~-~~G--~~~~g---------------~~~d~vll~~fG~G~t~~~~ll~~ 402 (406)
T 2d3m_A 363 DEMRRK---SA-AKG--LETYG---------------EGLEWGVLLGFGPGITVETILLHS 402 (406)
T ss_dssp HHHHHH---HH-HTT--CSBTT---------------TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHh---cc-ccC--CCccC---------------CCcceEEEEEeccchhhhhHHhhh
Confidence 766542 21 110 00000 012577888999998988888874
No 54
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.86 E-value=1.6e-19 Score=176.22 Aligned_cols=246 Identities=15% Similarity=0.147 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|++++...+ ...+..+..++..
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId-------~vi~~t~t~~-------------------------~~~p~~a~~v~~~ 163 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG-------AVLCACSNMQ-------------------------RAYPAMAIEVQNA 163 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE-------EEEEESSCCS-------------------------CSBSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------CCccHHHHHHHHH
Confidence 4678999999999999999999888 8888876421 1123468899999
Q ss_pred hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 171 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 171 lgl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
+|++.+++.|+.+|+|++.||..|.++|++|.++.+||+|+|.+. .. + . +......+
T Consensus 164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S-~~----------~-----------d-~~dr~t~~ 220 (392)
T 3led_A 164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICS-GH----------L-----------N-FRDRDSHF 220 (392)
T ss_dssp TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GG----------C-----------C-TTCTTTTT
T ss_pred hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcC-Cc----------C-----------C-cCcccCCc
Confidence 999889999999999999999999999999999999999999732 11 0 1 11223578
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCC----------------C----CCCCChH--------HHHH
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM----------------T----EPHPDGV--------GVIL 302 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~----------------~----~~~~~~~--------~~~~ 302 (433)
++||||+|+||++.+... .+ ..|.+....+++... . ....++. .+..
T Consensus 221 lFGDGA~A~vl~~~~~~~-~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~ 295 (392)
T 3led_A 221 IFGDVATAAIVERADDAQ-GG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSE 295 (392)
T ss_dssp TBCEEEEEEEEEEGGGCC-SS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHH
T ss_pred ccccccEEEEEEecCCCC-CC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHH
Confidence 999999999999754210 11 234443333222110 0 0011222 2346
Q ss_pred HHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHH-HcCC-CCcccccchhhhhhHhhhHHHHHHHHHHHHHHcC
Q 013946 303 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTG 380 (433)
Q Consensus 303 ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~-~~~~-~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~ 380 (433)
+++++|+++|++++|||++..|-.+.. -.+++.+. ++-. ..-.+...-..+||+.+|+=.+.|-. + .+
T Consensus 296 ~i~~~L~~~gl~~~dId~~v~Hqan~~-----i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~----~-~~ 365 (392)
T 3led_A 296 MIIEHAREIGIDPHGLKRMWLHQANIN-----MNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHK----H-QD 365 (392)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECSSCHH-----HHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHH----C-CT
T ss_pred HHHHHHHHcCCCHHHCcEEEEcCCCHH-----HHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHH----H-hC
Confidence 789999999999999999999965543 34444444 3521 11112233456799988775544332 1 11
Q ss_pred CcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 381 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 381 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+ .+-+.++..+||.|-+..+++|+.
T Consensus 366 ~~-------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 366 DM-------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp TC-------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 11 112567778999998888888874
No 55
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.84 E-value=2.8e-19 Score=173.43 Aligned_cols=304 Identities=15% Similarity=0.128 Sum_probs=188.6
Q ss_pred CCCCCCCCCCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHH
Q 013946 14 KKKPHMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 92 (433)
Q Consensus 14 ~~~~~~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~ 92 (433)
...|.++.+.+.|+|+|...|.- .+.+++.+.+. +.+ ...+ +...+...+ .+.. .-...
T Consensus 21 ~~~~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-~~~i--~~~tGI~~R-----------~~a~-----~~~~~ 80 (365)
T 3gwa_A 21 SMTPAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-AEKI--LAKTGIRER-----------RIAA-----PRETA 80 (365)
T ss_dssp --------CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-HHHH--HHHHCCCEE-----------EECC-----TTCCH
T ss_pred ccCccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-HHHH--HHhcCccEE-----------EECC-----CCCCH
Confidence 33555666789999999999997 57777776541 110 0000 000000000 0000 11235
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+++|+++++|| .|++++...+ ...+..+..++..+|
T Consensus 81 ~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lG 128 (365)
T 3gwa_A 81 ADLAYEAARKLFAQGAVGADQVD-------FVILCTQAPD-------------------------YVLPTSACMLQHRLG 128 (365)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGCC-------EEEEEESSCS-------------------------CSBSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHcC
Confidence 78999999999999999999888 8899876421 112335789999999
Q ss_pred CC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 173 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 173 l~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
++ .+++.|+.+|+|++.||..|.++|++|.++.+||+|+|.+..... + ++....+
T Consensus 129 l~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------~-------~dr~~~~ 185 (365)
T 3gwa_A 129 IPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLH----------------P-------LDKSVRT 185 (365)
T ss_dssp CCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC----------------T-------TCHHHHT
T ss_pred CCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCC----------------c-------ccccccc
Confidence 97 589999999999999999999999999999999999998432210 0 0112356
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEe-eecc-------CCCC-CC-------------------CCCCCh-----
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGG-SFTS-------DAYH-MT-------------------EPHPDG----- 297 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~-~~~~-------d~~~-~~-------------------~~~~~~----- 297 (433)
++||||+|+||++.+.. ...+.....+. +... .+.. .. ....++
T Consensus 186 lfGDGAaA~vl~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~ 262 (365)
T 3gwa_A 186 LFGDGASATAVIAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMA 262 (365)
T ss_dssp TBCCEEEEEEEEEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHH
T ss_pred cccceeEEEEEEecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHH
Confidence 89999999999875321 01122222111 1100 0000 00 000112
Q ss_pred ---HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHH
Q 013946 298 ---VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 298 ---~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~ 373 (433)
..+.++++++|+++|++++|||++..|..+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..+
T Consensus 263 ~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~Lgl~~ek~~--~~l~~~GNtssAsipl~L~~~ 335 (365)
T 3gwa_A 263 FSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF-----MLDALRKKMKIPEHKFP--VLMEHCGNTVSSTLPLALETM 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHHTCCGGGSC--CCCTTTCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHhCCCHHHHH--HHHhcccchHHHHHHHHHHHH
Confidence 23456889999999999999999999965543 3455666665431 222 233568999988765544433
Q ss_pred HHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 374 VQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 374 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
++.+.+ .+-+.++..+||.|-+..++|++
T Consensus 336 ---~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 336 ---RANGTL-------------------------ARGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp ---HHTTCC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---HHcCCC-------------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 344332 12356777899999888888875
No 56
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.83 E-value=1.4e-18 Score=165.77 Aligned_cols=240 Identities=18% Similarity=0.177 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++..+. ...+..+.+++..+
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 105 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-------LIIVATTSHS-------------------------HAYPSAACQVQGLL 105 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCccHHHHHHHHh
Confidence 578999999999999999999888 8899886421 11223588999999
Q ss_pred CCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~-Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
|++ .|++.|+.+|+|++.||..|+++|++|+++.+||+|+|.+... + + ++.+...+
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~-----------~-~~d~~~~~ 162 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK-----------L-----------D-ETDRSTVV 162 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-----------C-----------C-TTCTTTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc-----------c-----------C-cccccccc
Confidence 996 4899999999999999999999999999999999999984211 0 0 11123568
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCC---CC------------CCCChH--------HHHHHHHHH
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM---TE------------PHPDGV--------GVILCIEKA 307 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~---~~------------~~~~~~--------~~~~ai~~a 307 (433)
++||||+|+||++.+ ...++ ++...+++... .. ...++. .+.++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~i~----~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEGII----STHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCCEE----EEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCCeE----EEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999999753 12232 22222222100 00 011222 245678999
Q ss_pred HHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCC
Q 013946 308 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 386 (433)
Q Consensus 308 l~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~ 386 (433)
|+++|++++|||++..|..+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..+ ++.+.+
T Consensus 234 l~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~---- 299 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPHQANLR-----IITATAKKLEMDMSQVV--VTLDKYANNSAATVPVALDEA---IRDGRI---- 299 (323)
T ss_dssp HHTTTCCTTTCCEEEECCSCHH-----HHHHHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTSS----
T ss_pred HHHcCCCHHHCCEEEEcCCCHH-----HHHHHHHHcCcCHHHhh--ccHhhcCchHHHHHHHHHHHH---HHcCCC----
Confidence 9999999999999999966543 3455666665331 222 234567999999866665543 334332
Q ss_pred CCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 387 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.+.+.++..+||.|-+..+++++
T Consensus 300 ---------------------~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 300 ---------------------QRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ---------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCCEEEEEEEehhheeEEEEEE
Confidence 11246677899999888888875
No 57
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.83 E-value=4.7e-20 Score=180.87 Aligned_cols=265 Identities=13% Similarity=0.111 Sum_probs=172.2
Q ss_pred CEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 013946 23 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 101 (433)
Q Consensus 23 ~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa~ 101 (433)
.+.|.|+|...|.- .+.+++.+.+ |.+. ..+. ...+...+ .+.+ .-.....|++.|++
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~--~~~~-~~i~--~~~Gi~~r-----------~~~~-----~~e~~~~la~~Aa~ 60 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKFL--IGIGQTEM-----------AVSP-----VNQDIVSMGANAAK 60 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHHH--TTTCCSEE-----------EECC-----TTCCHHHHHHHHHH
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHh--CCCH-HHHh--hhcCceEE-----------EeCC-----CCCCHHHHHHHHHH
Confidence 47899999999986 5667766543 2110 0000 00000000 0000 11235689999999
Q ss_pred HHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC--CCcce
Q 013946 102 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM--GPNYS 179 (433)
Q Consensus 102 ~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~~ 179 (433)
+||++ +++++|+ .|++|+..+. ......+..++..||++ .+++.
T Consensus 61 ~aL~~--~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~~~ 106 (396)
T 1xpm_A 61 DIITD--EDKKKIG-------MVIVATESAV-------------------------DAAKAAAVQIHNLLGIQPFARCFE 106 (396)
T ss_dssp TTCCH--HHHHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHTTCCSSCEEEE
T ss_pred HHHhc--CCHHHCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHhCCCCCceEEE
Confidence 99987 6666665 6777876421 11234678999999997 48999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
++++|+|++.||..|.++|++|.++.+||+|+|. . ... ++ ..+++++||||+|+
T Consensus 107 v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s-~~~-----------------------~~-~~~~~~~GdGA~A~ 160 (396)
T 1xpm_A 107 MKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-A-RYG-----------------------LN-SGGEPTQGAGAVAM 160 (396)
T ss_dssp EESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-E-CCC-----------------------TT-CSSGGGCEEEEEEE
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-h-ccc-----------------------cC-CCCCcccccceEEE
Confidence 9999999999999999999999999999999996 1 110 11 13689999999999
Q ss_pred EecchHHHHhcCCeEEEEEEEeeecc-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCCCCCCccEEEec
Q 013946 260 LLEELEHAKKRGAKIYAEFRGGSFTS-DAYHMTEPHP------DGVG--------VILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~------~~~~--------~~~ai~~al~~agl~~~dId~v~~h 324 (433)
||++. ..++....+.+... +..+...|.+ ++.. +.++++++|+++|++++|||||..|
T Consensus 161 vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H 233 (396)
T 1xpm_A 161 VIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFH 233 (396)
T ss_dssp EEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred EeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 99863 23555555433332 3332222222 4544 6789999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCC-CCc-----ccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 325 ATSTPAGDIKEYQALIHCFGQN-RGL-----RVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 325 ~~gt~~~D~~E~~al~~~~~~~-~~~-----~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
+++++..|......+....+-. ..+ +-......+||+.+||-.+.|..++.
T Consensus 234 ~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~ 290 (396)
T 1xpm_A 234 VPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 290 (396)
T ss_dssp CSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH
Confidence 9999877765433221100000 000 01122366899999987777766543
No 58
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.82 E-value=2.3e-19 Score=176.81 Aligned_cols=264 Identities=13% Similarity=0.097 Sum_probs=177.2
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHH
Q 013946 87 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM 166 (433)
Q Consensus 87 ~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 166 (433)
..++....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+.+
T Consensus 120 ~~~~~~~~La~~Aa~~AL~~agl~~~~Id-------~li~~t~~~--------------------------~~~p~~a~~ 166 (413)
T 1xes_A 120 MLAMEVPRLAKEAAEKAIQEWGQSKSGIT-------HLIFCSTTT--------------------------PDLPGADFE 166 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESCC--------------------------CEESCHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CccchHHHH
Confidence 33456789999999999999999998887 788887641 112345789
Q ss_pred HHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccc
Q 013946 167 LAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 243 (433)
Q Consensus 167 ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pf 243 (433)
++..||++++ .++++.+|+|++.||..|.++|++|.++.+||+|+|.+...+ .++. .++|
T Consensus 167 v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~---------------~~~~--d~~~ 229 (413)
T 1xes_A 167 VAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF---------------RGPS--ETHL 229 (413)
T ss_dssp HHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC---------------CCCC--TTCH
T ss_pred HHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh---------------cCCC--ccch
Confidence 9999999875 788999999999999999999999999999999999742110 0111 1355
Q ss_pred cCCCCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCCCC-----------CCCC-----ChHHHHHHH
Q 013946 244 DINRDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYHMT-----------EPHP-----DGVGVILCI 304 (433)
Q Consensus 244 d~~~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~~~-----------~~~~-----~~~~~~~ai 304 (433)
+....++++||||+|+||++.+.. + .....++.+.+... +..... .... ....+..++
T Consensus 230 ~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 306 (413)
T 1xes_A 230 DSLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCM 306 (413)
T ss_dssp HHHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHH
Confidence 556678999999999999875421 2 11113444443221 110000 0000 123456789
Q ss_pred HHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHHHH-HcC
Q 013946 305 EKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQAI-RTG 380 (433)
Q Consensus 305 ~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l-~~~ 380 (433)
+++|+++|++ .+|| ++..|..+.. =.+++.+.++-. .++..+ .....+||+.+|+-.+.|..++..- +.|
T Consensus 307 ~~~L~~~gl~d~~di-~~v~Hq~~~~-----i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G 380 (413)
T 1xes_A 307 VEAFSQFKISDWNKL-FWVVHPGGRA-----ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNG 380 (413)
T ss_dssp HHHHGGGTCCCGGGS-EEEECCSCHH-----HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCccce-eEEECCCCHH-----HHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccC
Confidence 9999999998 8888 8999976554 334455566533 233322 3456789999999887777665432 111
Q ss_pred CcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 381 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 381 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.+.| . ...+.++..+||.|-+..+++|+-
T Consensus 381 ~~~~-----------------G-----~~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 381 CSTT-----------------G-----EGLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp CSBT-----------------T-----TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred CCCC-----------------C-----CCcceEEEEEecCCcEEeEEEEEe
Confidence 1100 0 012567788999988888888763
No 59
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.82 E-value=1.8e-19 Score=176.37 Aligned_cols=264 Identities=12% Similarity=0.092 Sum_probs=176.1
Q ss_pred hhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccch
Q 013946 83 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNM 162 (433)
Q Consensus 83 ~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (433)
.+....+.....|+.+|+++||+++|+++++|| .|++++..+ ...+.
T Consensus 89 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~--------------------------~~~p~ 135 (387)
T 3a5r_A 89 VRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-------HLIVCCLAG--------------------------VDMPG 135 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------CCCCc
Confidence 344444567789999999999999999998887 788887641 11234
Q ss_pred HHHHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCC
Q 013946 163 GSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKA 239 (433)
Q Consensus 163 ~a~~ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 239 (433)
.+.+++..+|+++. .+.++.+|+|++.||..|.++|++|.++.+||+|+|.+... .
T Consensus 136 ~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~---------------------~ 194 (387)
T 3a5r_A 136 ADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTC---------------------F 194 (387)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTT---------------------C
T ss_pred HHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchh---------------------h
Confidence 68899999999875 78899999999999999999999999999999999973210 1
Q ss_pred CccccC----CCCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCCCC-----------CCCC-----C
Q 013946 240 SRPWDI----NRDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYHMT-----------EPHP-----D 296 (433)
Q Consensus 240 ~~pfd~----~~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~~~-----------~~~~-----~ 296 (433)
..|+|. ...++++||||+|+||++.+.. + .....++.+.+... +..... .... .
T Consensus 195 ~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 271 (387)
T 3a5r_A 195 RGPSETHLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLI 271 (387)
T ss_dssp CCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred cCCCccchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHH
Confidence 123332 3367899999999999875421 1 11113444433221 110000 0000 1
Q ss_pred hHHHHHHHHHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAV 373 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~ 373 (433)
...+..+++++|+++|++ .+|| ++..|..+... .+++.+.++-.. ++..+ .....+||+.+|+-.+.|..+
T Consensus 272 ~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 345 (387)
T 3a5r_A 272 SNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEM 345 (387)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 234567899999999998 8889 89999776543 344555565321 23222 346778999999988777766
Q ss_pred HHHH-HcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 374 VQAI-RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 374 ~~~l-~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+..- +.|.+.| . ...+.++..+||.|-+..+++|+-
T Consensus 346 ~~~g~~~G~~~~-----------------G-----~~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 346 RKKSLENGQATT-----------------G-----EGLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHTTCSBT-----------------T-----TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHhccccCCCCC-----------------C-----CCcceEEEEEecCcceeeehhhee
Confidence 5432 1111100 0 012567788999888888888763
No 60
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.81 E-value=2.7e-19 Score=175.85 Aligned_cols=321 Identities=14% Similarity=0.109 Sum_probs=199.9
Q ss_pred CCCCEEEEecceecCcC-CCHHHHHHHHHc-C-----------------CCCceeCCCCCCCCCCcc-ccccccCCCCCC
Q 013946 20 KQKRVVVTGMGLVSPLG-HEPDVFYNNLLE-G-----------------VSGISEIETFDCTSFPTK-IAAEIKSFSTDG 79 (433)
Q Consensus 20 ~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~-g-----------------~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 79 (433)
.+.++.|+|+|...|.. .+.+++++.+.. . +++|..- ++.. +.. .......||...
T Consensus 18 ~~~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R-~~~~---~~~~~~~~p~~~d~~~ 93 (402)
T 1ee0_A 18 AQGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKR-YLAL---TEDYLQENPTMCEFMA 93 (402)
T ss_dssp --CCCEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEE-ECSC---CHHHHHHSGGGGSTTS
T ss_pred CCCCcEEEEeeecCCCcccCHHHHHHHHHHhhcccchhhhHHHHHHHHHhcCccce-eEec---CchhhccCcccccccC
Confidence 34578999999999997 577778776532 1 1222210 0000 000 000011122211
Q ss_pred C-CChhhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCccccc
Q 013946 80 W-VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFA 158 (433)
Q Consensus 80 ~-i~~~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (433)
. +..+..........|+.+|+++||+++|+++++|| .|++++..+ .
T Consensus 94 ~~~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~--------------------------~ 140 (402)
T 1ee0_A 94 PSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKIT-------HLIFCTTAG--------------------------V 140 (402)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEECSSC--------------------------C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------C
Confidence 1 23333444456788999999999999999998887 788887631 1
Q ss_pred ccchHHHHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCC
Q 013946 159 TTNMGSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND 235 (433)
Q Consensus 159 ~~~~~a~~ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~ 235 (433)
..+..+..++..||+++. .++++.+|+|++.||..|.++|++|.++.+||+|+|.+. ..
T Consensus 141 ~~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i~~g~~~~vLvvg~E~~s-~~----------------- 202 (402)
T 1ee0_A 141 DMPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLAENNKGSRVLIVCSEITA-IL----------------- 202 (402)
T ss_dssp EESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHHHHSTTCCEEEEEEECGG-GG-----------------
T ss_pred CCChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh-----------------
Confidence 123458899999999873 788999999999999999999999999999999999732 10
Q ss_pred CCCCCccccCC----CCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeeccCCCC---C----------CCCCC--
Q 013946 236 PTKASRPWDIN----RDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTSDAYH---M----------TEPHP-- 295 (433)
Q Consensus 236 ~~~~~~pfd~~----~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~----------~~~~~-- 295 (433)
...|+|.+ ..++++||||+|+||++.+. .+ .....++.+.+....... . .....
T Consensus 203 ---~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v 276 (402)
T 1ee0_A 203 ---FHGPNENHLDSLVAQALFGDGAAALIVGSGPH---LAVERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDV 276 (402)
T ss_dssp ---CCCCCTTCHHHHHHTTTBCCEEEEEEEESSCC---TTTCCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTH
T ss_pred ---hcCCcccchhhhccceeEecceEEEEEecCCC---ccccCCceEEEeeeeEEcCCchHhcCceeccCceEEEecchH
Confidence 11233322 25789999999999987542 11 111134444332211100 0 00001
Q ss_pred ---ChHHHHHHHHHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHH
Q 013946 296 ---DGVGVILCIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVE 369 (433)
Q Consensus 296 ---~~~~~~~ai~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~ 369 (433)
....+..+++++|+++|++ .+|| ++..|..+... .+++.+.++-. .++..+ .....+||+.+|+-.+.
T Consensus 277 ~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~ 350 (402)
T 1ee0_A 277 PLMVAKNIENAAEKALSPLGITDWNSV-FWMVHPGGRAI-----LDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFI 350 (402)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSSHHH-----HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccccc-eEEECCCCHHH-----HHHHHHHcCCChHHhHHHHHHHHhcCCchhhHHHHH
Confidence 1134567899999999998 8889 89999765543 34455555533 233332 45677899999998777
Q ss_pred HHHHHHHHH-cCCcCCCCCCCCCCCCCCCccccCCccccc-CccEEEEecccccceeeeeEEc
Q 013946 370 AIAVVQAIR-TGWIHPNINLENPDAVVDTNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 370 l~~~~~~l~-~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
|..++..-+ .|.+ .+. ..+.++..+||.|-+..+++|+
T Consensus 351 L~~~~~~g~~~G~~-----------------------~~G~~~d~vll~~fG~G~t~~~~ll~ 390 (402)
T 1ee0_A 351 IDEVRKRSMAEGKS-----------------------TTGEGLDCGVLFGFGPGMTVETVVLR 390 (402)
T ss_dssp HHHHHHHHHHTTCS-----------------------BTBTTBSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHhccccCCC-----------------------CCCCCcceEEEEEecCCcEEEEEEEE
Confidence 776654321 1100 000 1156777899988777777775
No 61
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.81 E-value=1.3e-18 Score=168.05 Aligned_cols=244 Identities=16% Similarity=0.104 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|++++... ..| ... ..+..++..
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~~~------------------~~~----d~~--~~a~~v~~~ 101 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-------LVLHSSLWF------------------QGI----DLW--PAASYVAHE 101 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-------EEEEECSSC------------------CSS----SSS--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC------------------CCc----ccc--cHHHHHHHH
Confidence 3578999999999999999999888 788887520 001 111 247889999
Q ss_pred hCCCC-CcceecccchHHHHHHHHHHHHHHcCCCC--EEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMG-PNYSISTACATSNFCILNAANHIIRGEAN--VMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d--~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++. +.+.|+.+|+|++.||..|..+|++|.++ .+||+++|.+..+. ...++. +
T Consensus 102 lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~---------------------~~~~~~-~ 159 (357)
T 3s3l_A 102 AVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR---------------------IDRWNS-V 159 (357)
T ss_dssp HTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT---------------------CCTTTS-S
T ss_pred hCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc---------------------cccccc-c
Confidence 99975 89999999999999999999999999999 99999999843111 011222 2
Q ss_pred CCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCC---------CCCC--------CCCh-------------
Q 013946 248 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH---------MTEP--------HPDG------------- 297 (433)
Q Consensus 248 ~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---------~~~~--------~~~~------------- 297 (433)
.++++||||+|+||++.+ +. ..|.++...+++.. ...+ ..++
T Consensus 160 ~~~lfGDGA~A~vl~~~~-----~~---~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRD-----GF---ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSC-----CS---EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCC-----CC---CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 578999999999998642 11 12444433333321 0000 0011
Q ss_pred ------HHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHH
Q 013946 298 ------VGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVE 369 (433)
Q Consensus 298 ------~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~ 369 (433)
..+.++++++|+++|++++|||++.+ |..... -+ ++.+.++-.. ++.. ..-..+||+.+|+=.+.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~ek~~~-~~~~~~GNt~aAsipl~ 304 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDERTSW-AYGRTTGHVGAGDQYAG 304 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGGGBTH-HHHHHHCBCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHHHhHH-HhccccccchHhHHHHH
Confidence 13456889999999999999999996 876655 33 3444454321 2221 22234688888875555
Q ss_pred HHHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 370 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 370 l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
|..+ ++.|.+ .+-+.++..+||.|-+..+++|+
T Consensus 305 L~~~---~~~g~l-------------------------~~Gd~vll~~fG~G~t~~a~ll~ 337 (357)
T 3s3l_A 305 LAHL---VENALV-------------------------QPGDRVLLFGGGAGYTCTAAVVE 337 (357)
T ss_dssp HHHH---HHTTCC-------------------------CTTCEEEEECCBTTTEEEEEEEE
T ss_pred HHHH---HHcCCC-------------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 5443 333332 11246777899998888888876
No 62
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.80 E-value=2.3e-18 Score=166.42 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++.... ...+..+..++..+
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 121 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID-------LLLVNTLSPD-------------------------HHDPSQACLIQPLL 121 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 467999999999999999999888 8899876421 11224588999999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC-CCCC
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI-NRDG 249 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~-~~~G 249 (433)
|++. |.+.|+.+|+|++.||..|+.+|++|.++.+||+++|.+.... ++-|. ....
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~----------------------~~~d~~~~t~ 179 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM----------------------DCSDRGRNLS 179 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC----------------------CCSTTTHHHH
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC----------------------Cccccccccc
Confidence 9975 8999999999999999999999999999999999999842211 00010 1245
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEe-eec-----cC--CC-CCC------------CCCCChH--------HH
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGG-SFT-----SD--AY-HMT------------EPHPDGV--------GV 300 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~-~~~-----~d--~~-~~~------------~~~~~~~--------~~ 300 (433)
+++||||+|+||++.+. .+..++...... +.. .. +. ... ....++. .+
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~ 256 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTL 256 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHH
Confidence 77999999999997432 122333222221 100 00 00 000 0001222 34
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 301 ~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+++++|+++|++++|||++..|-.+.. -.+.+.+.++-.. ++.. .-..+||+.+|+=.+.|..++. .
T Consensus 257 ~~~i~~~L~~~gl~~~did~~v~Hq~n~~-----i~~~~~~~lgl~~ek~~~--~l~~~GNt~sAsi~l~L~~~~~---~ 326 (359)
T 3h78_A 257 VRIAGEMLAAHELTLDDIDHVICHQPNLR-----ILDAVQEQLGIPQHKFAV--TVDRLGNMASASTPVTLAMFWP---D 326 (359)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEECCSCHH-----HHHHHHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHGG---G
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCcCHHHhhh--hhhcccchHHHHHHHHHHHHHH---h
Confidence 56889999999999999999999965543 3455666665431 2222 3456799999986665554332 1
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+ .+-+.++..+||.|-+..+++|+
T Consensus 327 --l-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 350 (359)
T 3h78_A 327 --I-------------------------QPGQRVLVLTYGSGATWGAALYR 350 (359)
T ss_dssp --S-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --C-------------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 1 01245677789998888888886
No 63
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.80 E-value=4.9e-18 Score=164.23 Aligned_cols=246 Identities=19% Similarity=0.246 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|+++++.+ ....+..+..|+..|
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~-------------------------~~~~P~~a~~v~~~L 109 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-------AVIVSTVTF-------------------------PHATPSAAALVAHEI 109 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-------EEEEECSCC-------------------------SCSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC-------------------------CCCCCchHHHHHHHh
Confidence 467999999999999999999888 788888642 122345688999999
Q ss_pred CCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCc
Q 013946 172 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 250 (433)
Q Consensus 172 gl~G-p~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~ 250 (433)
|++. +++.|+.+|++++.||..|..+|++|..+.+||+++|.+. .. + . +......+
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s-~~----------~-----------d-~~~~~~~~ 166 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLS-DV----------V-----------D-PTDRSISF 166 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-GG----------C-----------C-TTCTTTGG
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeece-ec----------c-----------c-cccccccc
Confidence 9976 7889999999999999999999999999999999999732 11 1 1 12233567
Q ss_pred ccccceeEEEecchHHHHhcCCeEEEEEEEee-ec-----------------------cCCCCC--------CCCCCChH
Q 013946 251 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS-FT-----------------------SDAYHM--------TEPHPDGV 298 (433)
Q Consensus 251 ~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~-~~-----------------------~d~~~~--------~~~~~~~~ 298 (433)
++||||+|+||++.+.. .+.....+.. .. .+.... .....++.
T Consensus 167 lfgDGA~A~vl~~~~~~-----~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 167 LLGDGAGAVIVAASDEP-----GISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp GBCEEEEEEEEEEESSC-----CBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred ccccchheeeeecccCC-----CccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 89999999999865321 1111111110 00 000000 00111222
Q ss_pred --------HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHH
Q 013946 299 --------GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEA 370 (433)
Q Consensus 299 --------~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l 370 (433)
.+.++++++|+++|++++|||++..|..+.. =.+++.+.++-.....+...-..+||+.+||=.+.|
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L 316 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMR-----IIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAM 316 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHH-----HHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHH-----HHHHHHHHcCcChHhEEecccccccchHHHHHHHHH
Confidence 2456899999999999999999999965543 345566666533211122233457999888755544
Q ss_pred HHHHHHHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 371 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 371 ~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
.. .++++.+ .+.+.++..+||.|=+..++|++
T Consensus 317 ~~---~~~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 317 HR---LLEENPE-------------------------LSGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HH---HHHHCGG-------------------------GTTSEEEEEEEETTTEEEEEEEE
T ss_pred HH---HHHhCCC-------------------------CCcCEEEEEEEchhhEeEEEEEE
Confidence 33 3344332 12245666788876666777775
No 64
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.79 E-value=7.3e-19 Score=172.22 Aligned_cols=263 Identities=13% Similarity=0.058 Sum_probs=173.9
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchH
Q 013946 84 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMG 163 (433)
Q Consensus 84 ~~~~~~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (433)
+..........|+.+|+++||+++|+++++|| .|++++..+ ...+..
T Consensus 94 r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id-------~li~~t~~~--------------------------~~~p~~ 140 (389)
T 1i88_A 94 RQDMVVVEVPRLGKEAAVKAIKEWGQPKSKIT-------HLIVCTTSG--------------------------VDMPGA 140 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEECCC--------------------------CCCchH
Confidence 33344456788999999999999999998887 788887631 112345
Q ss_pred HHHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCC
Q 013946 164 SAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 240 (433)
Q Consensus 164 a~~ia~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 240 (433)
+..++..||+++. .+.++.+|+|++.||..|.++|++|.++.+||+|+|.+. .. ..
T Consensus 141 a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i~~g~~~~vLvvg~E~~s-~~--------------------~~ 199 (389)
T 1i88_A 141 DYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTA-VT--------------------FR 199 (389)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGG-GT--------------------CC
T ss_pred HHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-Hh--------------------Hc
Confidence 8899999999874 788999999999999999999999999999999999832 10 11
Q ss_pred ccccCC----CCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCCCC-----------CCCC-----Ch
Q 013946 241 RPWDIN----RDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYHMT-----------EPHP-----DG 297 (433)
Q Consensus 241 ~pfd~~----~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~~~-----------~~~~-----~~ 297 (433)
.|+|.+ ..++++||||+|+||++.+.. + .....++.+.+... +..... .... ..
T Consensus 200 ~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 276 (389)
T 1i88_A 200 GPSDTHLDSLVGQALFGDGAAALIVGSDPVP---EIEKPIFEMVWTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVS 276 (389)
T ss_dssp CCCTTCHHHHHHHHHBCCEEEEEEEESSCCT---TTSCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHHH
T ss_pred CccccccccccccceEecceEEEEEecCCCC---ccCCCceEEEeeeeEEcCCCcccceeEEecCceEEEeccHHHHHHH
Confidence 233322 247899999999999875421 1 11112344433211 110000 0001 12
Q ss_pred HHHHHHHHHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
..+..+++++|+++|++ .+|| ++..|..+.... +++.+.++-.. ++..+ .....+||+.+|+-.+.|..++
T Consensus 277 ~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~-----~~~~~~lgl~~ek~~~~~~~l~~~GNtssAsi~~~L~~~~ 350 (389)
T 1i88_A 277 KNITKALVEAFEPLGISDYNSI-FWIAHPGGPAIL-----DQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR 350 (389)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSS-EEEECCSCHHHH-----HHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhhc-eEEECCCcHHHH-----HHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 34567889999999998 8888 999997766533 34555555321 23322 3467789999998777776665
Q ss_pred HHHHcCCcCCCCCCCCCCCCCCCccccCCccccc-CccEEEEecccccceeeeeEEcc
Q 013946 375 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 375 ~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
..-++ |.. +... ..+.++..+||.|-+..+++|+.
T Consensus 351 ~~g~~---~G~-------------------~~~g~~~d~vll~~fG~G~t~~~~ll~~ 386 (389)
T 1i88_A 351 KKSTQ---NGL-------------------KTTGEGLEWGVLFGFGPGLTIETVVLRS 386 (389)
T ss_dssp HHHHH---TTC-------------------SBTTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred Hhccc---cCC-------------------cccCCCCceEEEEEecCccEEEEEEEEe
Confidence 43211 000 0000 12567778999888888888764
No 65
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.79 E-value=1.4e-18 Score=170.71 Aligned_cols=259 Identities=12% Similarity=0.084 Sum_probs=171.8
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH
Q 013946 89 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 168 (433)
Q Consensus 89 ~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 168 (433)
......|+.+|+++||+++|+++++|| .|++++..+ ...+..+.+++
T Consensus 112 ~~~~~~La~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~--------------------------~~~p~~a~~v~ 158 (402)
T 3awk_A 112 VLEVPKLAKEAAISAIKQWGQPKSKIT-------HLVFATTSG--------------------------VDMPGADFQLA 158 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEECSC--------------------------CCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CcCChHHHHHH
Confidence 356778999999999999999998887 788887631 11234578999
Q ss_pred HHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 169 MDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 169 ~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
..+|+++. .+.++.+|+|++.||..|.++|++|.++.+||+|+|.+... ...|+|.
T Consensus 159 ~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~---------------------~~~~~d~ 217 (402)
T 3awk_A 159 KLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLAENNKGARVLVACSEVTAVT---------------------FRAPSET 217 (402)
T ss_dssp HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTT---------------------CCCCCTT
T ss_pred HHcCCCCccceeeEECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchh---------------------hcCCCcc
Confidence 99999874 78899999999999999999999999999999999983210 1123333
Q ss_pred C----CCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCCCC-----------CCCCC-----hHHHHH
Q 013946 246 N----RDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYHMT-----------EPHPD-----GVGVIL 302 (433)
Q Consensus 246 ~----~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~~~-----------~~~~~-----~~~~~~ 302 (433)
+ ..++++||||+|+||++.+.. + .....++.+.+... +..+.. ..... ...+..
T Consensus 218 ~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 294 (402)
T 3awk_A 218 HLDGLVGSALFGDGAAALIVGSDPVP---QEEKPLFEIHWAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNIDK 294 (402)
T ss_dssp CHHHHHHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHH
T ss_pred CHHHhhccccccCceEEEEEecCCCc---cccCCceEEEeeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHHHH
Confidence 2 237899999999999875421 1 11113444433211 110000 00011 134557
Q ss_pred HHHHHHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 303 CIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 303 ai~~al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
+++++|+++|++ .+|| ++..|..+... .+++.+.++-. .++..+ ..-..+||+.+|+-.+.|..++..-+.
T Consensus 295 ~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~ 368 (402)
T 3awk_A 295 VLAEPLEYVHFPSYNDM-FWAVHPGGPAI-----LDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEE 368 (402)
T ss_dssp HTHHHHHHTTCCCGGGE-EEEECCSCHHH-----HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCccce-eEEECCCcHHH-----HHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHhhccc
Confidence 889999999998 7788 89999766543 34455556533 233322 345678999999877777665542211
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccC-ccEEEEecccccceeeeeEEccC
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLE-VKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
|.. ....+ ...++..+||.|-+..+++|+..
T Consensus 369 ---~G~-------------------~~~g~g~d~vll~~fG~G~t~~~~ll~~~ 400 (402)
T 3awk_A 369 ---LHL-------------------PTTGEGFEWGFVIGFGPGLTVETLLLRSI 400 (402)
T ss_dssp ---TTC-------------------SBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ---cCC-------------------CcCCCCcceEEEEEecccceeeeheeeec
Confidence 000 00001 25677789998888888888753
No 66
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.79 E-value=1.5e-18 Score=171.04 Aligned_cols=262 Identities=10% Similarity=0.045 Sum_probs=173.1
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH
Q 013946 89 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 168 (433)
Q Consensus 89 ~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 168 (433)
......|+.+|+++||+++|+++++|| .|++++..+ ...+..+..++
T Consensus 117 ~~~~~~La~~Aa~~aL~~agl~~~dId-------~li~~t~~~--------------------------~~~p~~a~~v~ 163 (413)
T 2p0u_A 117 VAQVPKLAKEASMNAIKEWGRPKSEIT-------HIVMATTSG--------------------------VNMPGAELATA 163 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CCBSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEecCC--------------------------cccCcHHHHHH
Confidence 345678999999999999999998887 788887631 11234578999
Q ss_pred HHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 169 MDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 169 ~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
..+|+++. .+.++.+|+|++.||..|.++|++|.++.+||+|+|.+. ... .++. .++|+.
T Consensus 164 ~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~sg~~~~vLvvg~E~~s-~~~--------------~~~~--d~~~~~ 226 (413)
T 2p0u_A 164 KLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLAENNAGARVLAICSEVTA-VTF--------------RAPS--ETHIDG 226 (413)
T ss_dssp HHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECST-TTC--------------CCCC--TTCHHH
T ss_pred HHhCCCCCcceEeEECCccHHHHHHHHHHHHHHHhCCCCEEEEEEEhhcc-hhc--------------cCCC--ccChhh
Confidence 99999874 788999999999999999999999999999999999842 110 0011 134444
Q ss_pred CCCCcccccceeEEEecchHHHHhcC-CeEEEEEEEeeecc--CCCC-C----------CCCCC-----ChHHHHHHHHH
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTS--DAYH-M----------TEPHP-----DGVGVILCIEK 306 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g-~~i~a~i~g~~~~~--d~~~-~----------~~~~~-----~~~~~~~ai~~ 306 (433)
...++++||||+|+||++.+.. + .....++.+.+... +... . ..... ....+..++++
T Consensus 227 ~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 303 (413)
T 2p0u_A 227 LVGSALFGDGAAAVIVGSDPRP---GIERPIYEMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKD 303 (413)
T ss_dssp HHHHHHBCCEEEEEEEESSCCT---TTCCCSEEEEEEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hcccceeecccEEEEEecCCCc---cccCCceEEEecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHHH
Confidence 5578899999999999875421 1 11112344433211 1100 0 00001 12345678999
Q ss_pred HHHHcCCC-CCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHHHHHHcCCcC
Q 013946 307 ALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAIRTGWIH 383 (433)
Q Consensus 307 al~~agl~-~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ip 383 (433)
+|+++|++ .+|| ++..|..+... .+++.+.++-.. ++..+ .....+||+.+|+-.+.|..++..-+. +
T Consensus 304 ~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~---~ 374 (413)
T 2p0u_A 304 TKNLVGASSWNEL-FWAVHPGGPAI-----LDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLE---S 374 (413)
T ss_dssp HHHHTTCCSGGGS-EEEECCSSHHH-----HHHHHHHTTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHH---T
T ss_pred HHHHcCCCCccce-EEEECCCCHHH-----HHHHHHHhCCCHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHhccc---c
Confidence 99999998 7888 89999766543 444555565321 22221 345678999999887777666543211 0
Q ss_pred CCCCCCCCCCCCCCccccCCccccc-CccEEEEecccccceeeeeEEcc
Q 013946 384 PNINLENPDAVVDTNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 384 p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
.. +... ..+.++..+||.|-+..+++|+-
T Consensus 375 G~-------------------~~~g~~~d~vll~~fG~G~t~~~~ll~~ 404 (413)
T 2p0u_A 375 NK-------------------STFGEGSEWGFLIGFGPGLTVETLLLRA 404 (413)
T ss_dssp TC-------------------SBTTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------cccCCCcceEEEEEeCccceeeeeeEEE
Confidence 00 0000 12567778999888888888763
No 67
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.79 E-value=1.5e-17 Score=158.58 Aligned_cols=293 Identities=15% Similarity=0.175 Sum_probs=181.6
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..+.|+|+|...|.- .+.+++.+.+ +.+ +.|-. .+ . ......+..+ -+ ...|+.+|+
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~-----~~~i~----~~-~----Gi~~R~~a~~-----~e-~~~La~~Aa 60 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMM--DTS-----AAWIH----SR-T----GISERRIVTQ-----EN-TSDLCHQVA 60 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHT--TSC-----HHHHH----HH-H----SCSEEECCSS-----CC-HHHHHHHHH
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHh--CCC-----hhhhh----hh-c----CceEEEECCC-----CC-HHHHHHHHH
Confidence 568999999999996 5777776653 111 00000 00 0 0000000011 11 578999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC-CCcce
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 179 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~~ 179 (433)
++||+++|+++++|| .|++++...+ ...+..+..++..+|++ .|++.
T Consensus 61 ~~aL~~ag~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~~ 108 (321)
T 3il6_A 61 KQLLEKSGKQASEID-------FILVATVTPD-------------------------FNMPSVACQVQGAIGATEAFAFD 108 (321)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------cCCCcHHHHHHHHcCCCCceEEE
Confidence 999999999999888 8899886421 11234688999999997 48999
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeEE
Q 013946 180 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 259 (433)
Q Consensus 180 v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaal 259 (433)
|+.+|+|++.||..|+++|++|.++.+||+|+|.+. .. + . ++.+...+++||||+|+
T Consensus 109 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~----------~-----------~-~~dr~~~~lfGDGA~A~ 165 (321)
T 3il6_A 109 ISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFS-KM----------L-----------D-WTDRSTAVLFGDGAAGV 165 (321)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGG-GG----------S-----------C-TTCTTTGGGBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------C-----------C-ccccccceeeccccEEE
Confidence 999999999999999999999999999999999842 11 0 0 11223567899999999
Q ss_pred EecchHHHHhcCCeEEEEEEEe-ee-----ccC--CCCCC----------CCCCChHHH----HHHHHHHHHHcCCCCCC
Q 013946 260 LLEELEHAKKRGAKIYAEFRGG-SF-----TSD--AYHMT----------EPHPDGVGV----ILCIEKALAHSGVSRED 317 (433)
Q Consensus 260 vL~~~~~A~~~g~~i~a~i~g~-~~-----~~d--~~~~~----------~~~~~~~~~----~~ai~~al~~agl~~~d 317 (433)
||++.+. ..+....... +. ... +.... ....++... .+.+.++++++ +.++|
T Consensus 166 vl~~~~~-----~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~d 239 (321)
T 3il6_A 166 LIEAAET-----PHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDET 239 (321)
T ss_dssp EEEEESS-----CCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGG
T ss_pred EEEEcCC-----CCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCccc
Confidence 9997542 1232222211 10 000 00000 011122221 22333444433 33899
Q ss_pred ccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Q 013946 318 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 396 (433)
Q Consensus 318 Id~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 396 (433)
||++..|..+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..+ ++.+.+.|.
T Consensus 240 id~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~~~G----------- 298 (321)
T 3il6_A 240 VDYLLLHQANVR-----IIDKIARKTKISREKFL--TNMDKYGNTSAASIPILLDEA---VENGTLILG----------- 298 (321)
T ss_dssp CSEEEECCSCHH-----HHHHHHHHHTCCGGGBC--CCGGGTCBCGGGHHHHHHHHH---HHTTSSCTT-----------
T ss_pred CCEEEEcCCCHH-----HHHHHHHHcCcCHHHhh--hhHhhcccHHHHHHHHHHHHH---HHhCCCCCC-----------
Confidence 999999955443 4556666665431 222 245678999998866555443 344433110
Q ss_pred CccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 397 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
..+.++..+||.|-+..+++++
T Consensus 299 ------------~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 299 ------------SQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ------------SCCEEEEEEEETTTEEEEEEEE
T ss_pred ------------CCCEEEEEEEehhheeEEEEEE
Confidence 1156777899999888888875
No 68
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.78 E-value=1.5e-18 Score=169.67 Aligned_cols=262 Identities=16% Similarity=0.118 Sum_probs=170.3
Q ss_pred CHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHH
Q 013946 90 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 169 (433)
Q Consensus 90 ~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 169 (433)
+....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+.+++.
T Consensus 100 ~~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~t~--------------------------~~~p~~a~~v~~ 146 (393)
T 3ov2_A 100 EEIPRLAKEAAEKAIKEWGRPKSEIT-------HLVFCSISG--------------------------IDMPGADYRLAT 146 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CCBSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CCCCCHHHHHHH
Confidence 45678999999999999999999888 889988642 112346889999
Q ss_pred HhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCC
Q 013946 170 DLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 246 (433)
Q Consensus 170 ~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 246 (433)
.||+++. ++.++.+|+|++.||..|.++|++|.++.+||+|+|.+...+ .+|+. +.++..
T Consensus 147 ~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~---------------~~~~d--~~~~~~ 209 (393)
T 3ov2_A 147 LLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSF---------------RGPNE--GDFEAL 209 (393)
T ss_dssp HHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTC---------------CCCCT--TCHHHH
T ss_pred HcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhc---------------cCCcc--cchhhh
Confidence 9999874 689999999999999999999999999999999999842110 00110 001111
Q ss_pred CCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeecc--CCCCC-----------CCCCCCh-----HHHHHHHHHHH
Q 013946 247 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAYHM-----------TEPHPDG-----VGVILCIEKAL 308 (433)
Q Consensus 247 ~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~--d~~~~-----------~~~~~~~-----~~~~~ai~~al 308 (433)
...+++||||+|+||++.+... -....+ ++...+... +.... ....+.- ..+..+++++|
T Consensus 210 ~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 287 (393)
T 3ov2_A 210 AGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERAL 287 (393)
T ss_dssp HHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHH
T ss_pred cccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHH
Confidence 2467899999999998754210 011122 333222111 11000 0001111 12346899999
Q ss_pred HHcCCCC-CCccEEEeccCCCCCCCHHHHHHHHHHHcCC-CCcccc-cchhhhhhHhhhHHHHHHHHHHHH-HHcCCcCC
Q 013946 309 AHSGVSR-EDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN-STKSMIGHLLGAAGAVEAIAVVQA-IRTGWIHP 384 (433)
Q Consensus 309 ~~agl~~-~dId~v~~h~~gt~~~D~~E~~al~~~~~~~-~~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~-l~~~~ipp 384 (433)
+++|+++ +|| ++..|-.+. .=.+++.+.++-. .++..+ ..-..+||+.+|+=.+.|-.+... ++.|.+.|
T Consensus 288 ~~~gl~~~~di-~~v~Hq~n~-----~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~ 361 (393)
T 3ov2_A 288 APLGVREWNDV-FWVAHPGNW-----AIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTT 361 (393)
T ss_dssp GGGTCCSGGGS-EEEECCCCH-----HHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT
T ss_pred HHcCCCcccCc-EEEECCCCh-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCC
Confidence 9999997 888 899995443 4456666666543 223221 234567999999877766665443 22233211
Q ss_pred CCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 385 NINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
- ...+.++..+||.|-+..+++|+.
T Consensus 362 G----------------------~~~d~vll~~fG~G~t~~~~ll~~ 386 (393)
T 3ov2_A 362 G----------------------DGLQWGVLLGFGPGLSIETVVLRS 386 (393)
T ss_dssp T----------------------TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred C----------------------CCCCeEEEEEECccceeeeeeeEE
Confidence 0 012567778999998988898875
No 69
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.78 E-value=7.7e-18 Score=162.72 Aligned_cols=246 Identities=15% Similarity=0.080 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||+++|+++++|| .|++++..++ ...+..+..++..+
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 113 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-------ALIFVSQTPN-------------------------YRLPATAFVLQAEL 113 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 567999999999999999999888 8999876421 11234578999999
Q ss_pred CCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCC
Q 013946 172 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 249 (433)
Q Consensus 172 gl~--Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G 249 (433)
|+. .+.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+.... . +++....
T Consensus 114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------------------~-~~d~~~~ 170 (354)
T 4efi_A 114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI----------------------D-PTDRSTS 170 (354)
T ss_dssp TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC----------------------C-TTCHHHH
T ss_pred CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC----------------------C-ccccccc
Confidence 993 58999999999999999999999999999999999999842111 0 1111235
Q ss_pred cccccceeEEEecchHHHHhcCCeEEEEEEEeeecc-------CCCCC--------------CCCCCCh--------HHH
Q 013946 250 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS-------DAYHM--------------TEPHPDG--------VGV 300 (433)
Q Consensus 250 ~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~-------d~~~~--------------~~~~~~~--------~~~ 300 (433)
+++||||+|+||++.+. ...+...+...+... .+... .....++ ..+
T Consensus 171 ~lfGDGA~A~vl~~~~~----~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 246 (354)
T 4efi_A 171 LLFGDAGTMTALETSNG----DAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAV 246 (354)
T ss_dssp TTBCCEEEEEEEEECCS----CCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHH
T ss_pred cccccceeEEEEeecCC----CCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHH
Confidence 78999999999987432 111112222111100 00000 0001122 234
Q ss_pred HHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-CcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 301 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 301 ~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
.++++++|+++|++++|||++..|..+.. =.+++.+.++-.. ++. ..-..+||+.+|+=.+.|..++. .
T Consensus 247 ~~~i~~~l~~~gl~~~did~~v~Hq~~~~-----i~~~~~~~Lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~~---~ 316 (354)
T 4efi_A 247 PKLVSRTLDIAGRDKDSYDAFLFHQANLF-----MLKHLAKKAGLPAERVP--VNIGEYGNTSCASIPLLITTELK---D 316 (354)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCCCHH-----HHHHHHHHTTCCGGGSC--CCHHHHCBCGGGHHHHHHHHHSH---H
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHH-----HHHHHHHHhCcCHHHHH--HHHhhhCcHHHHHHHHHHHHHHH---h
Confidence 56789999999999999999999965543 3455666665331 222 23467899999986666554432 2
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+ .+.+.++..+||.|-+..+++|+-
T Consensus 317 g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 317 RLK-------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp HHH-------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred CCC-------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 111 112467778999998888888863
No 70
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.78 E-value=8.8e-18 Score=167.12 Aligned_cols=231 Identities=16% Similarity=0.144 Sum_probs=153.6
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..|.|.|+|..+|.- .+.+++.+.+ |.+ + .++ ..+.. +..+ .+..+ -.....|++.|+
T Consensus 2 ~~v~I~~ig~y~P~~~v~~~~l~~~~--g~~---~-~~~-~~g~G------~~~~---~~~~~-----~e~~~~La~~Aa 60 (450)
T 2f82_A 2 KNVGILAMDIYFPPTCVQQEALEAHD--GAS---K-GKY-TIGLG------QDCL---AFCTE-----LEDVISMSFNAV 60 (450)
T ss_dssp CSCEEEEEEEECCSEEEEHHHHHHHT--TCC---T-TTT-TTTSC------CCEE---ECCCT-----TCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeeccHHHHHHHh--CCC---H-HHh-hhhhC------ceee---eeCCC-----CCCHHHHHHHHH
Confidence 368999999999987 5677766543 211 0 111 00000 0000 00001 122568999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCC---C-CC
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW---M-GP 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~-Gp 176 (433)
++||+++|+++++|+ .|++|+.... ......+..++..||+ + .+
T Consensus 61 ~~aL~~agi~~~~Id-------~li~~t~t~~-------------------------~~~p~~a~~v~~~lgl~g~~~~~ 108 (450)
T 2f82_A 61 TSLLEKYKIDPKQIG-------RLEVGSETVI-------------------------DKSKSIKTFLMQLFEKCGNTDVE 108 (450)
T ss_dssp HHHHHHTTCCGGGEE-------EEEEECCCCS-------------------------CSSSCHHHHHTHHHHTTTCCCCB
T ss_pred HHHHHHcCcCHHHCC-------EEEEEecCCC-------------------------CCCCcHHHHHHHHhCCcCCCCce
Confidence 999999999998777 7888876421 1123567889999998 3 47
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCC--CEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
++.++++|+|++.||..|.++|++|.+ +.+||+|+|.+. |+....+.++||
T Consensus 109 ~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~---------------------------~~~~~~~~~fGD 161 (450)
T 2f82_A 109 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV---------------------------YAEGPARPTGGA 161 (450)
T ss_dssp CCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC---------------------------CSSSTTGGGCEE
T ss_pred EEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc---------------------------ccCCCCCccccc
Confidence 899999999999999999999999998 999999999731 111235778999
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeecc--CCCCC----CCCCCChH--------HHHHHHHHHHH------HcCCC
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAYHM----TEPHPDGV--------GVILCIEKALA------HSGVS 314 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~--d~~~~----~~~~~~~~--------~~~~ai~~al~------~agl~ 314 (433)
||+|+||++.+. . .+.....|..... +.... ..+..++. .+..+++++++ ++|++
T Consensus 162 GA~A~ll~~~~~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~ 236 (450)
T 2f82_A 162 AAIAMLIGPDAP----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFS 236 (450)
T ss_dssp EEEEEEEESSCS----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ceEEEEeccCCc----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCC
Confidence 999999986431 1 1222223333221 10111 11223342 34567888886 89999
Q ss_pred CCCccEEEeccCCCCCCCHHHHH
Q 013946 315 REDVNYINAHATSTPAGDIKEYQ 337 (433)
Q Consensus 315 ~~dId~v~~h~~gt~~~D~~E~~ 337 (433)
++||||+..|..+++..+.....
T Consensus 237 ~~did~~v~Hq~~~~i~~~~~~~ 259 (450)
T 2f82_A 237 INDADYFVFHSPYNKLVQKSFAR 259 (450)
T ss_dssp GGGCSEEEECCSSHHHHHHHHHH
T ss_pred hhhcCEEEecCChHHHHHHHHHH
Confidence 99999999999998877765443
No 71
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.76 E-value=7.4e-17 Score=157.33 Aligned_cols=261 Identities=15% Similarity=0.118 Sum_probs=163.6
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHH
Q 013946 89 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 168 (433)
Q Consensus 89 ~~~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 168 (433)
++....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+..++
T Consensus 93 ~~~~~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~--------------------------~~~p~~a~~v~ 139 (387)
T 3oit_A 93 ADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG--------------------------AHVPGVDFRLV 139 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CEESCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC--------------------------CCcccHHHHHH
Confidence 346788999999999999999999888 889987641 11234688999
Q ss_pred HHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 169 MDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 169 ~~lgl~Gp---~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
..||+++. .+.++.+|+|++.||..|..+|++|.++.+||+|+|.+...+ .+++. +.++.
T Consensus 140 ~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~---------------~~~~d--~~~~~ 202 (387)
T 3oit_A 140 PLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYF---------------TGPDE--GCFRT 202 (387)
T ss_dssp HHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTC---------------CCCCS--SSCHH
T ss_pred HHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhc---------------cCccc--cchHh
Confidence 99999873 688999999999999999999999999999999999842110 00110 01111
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccC--CCC-----CC------CCCCC-----hHHHHHHHHHH
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD--AYH-----MT------EPHPD-----GVGVILCIEKA 307 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d--~~~-----~~------~~~~~-----~~~~~~ai~~a 307 (433)
....+++||||+|+||++.+. .......++.+.+.... ... .. ..... ...+..+++++
T Consensus 203 ~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~ 279 (387)
T 3oit_A 203 LLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDM 279 (387)
T ss_dssp HHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred hhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHH
Confidence 124678999999999987541 11112234444332211 100 00 00111 23455678888
Q ss_pred HHHc----CCCCCCcc--EEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 308 LAHS----GVSREDVN--YINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 308 l~~a----gl~~~dId--~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
|+++ |++ |+| ++..|-.+. .=.+++.+.++-.. ++..+ ..-..+||+.+|+=.+.|-.+ ++.
T Consensus 280 L~~~~~~~gl~--d~d~~~~v~Hq~n~-----~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~---~~~ 349 (387)
T 3oit_A 280 FGPLLGGDGGG--GWNDLFWAVHPGSS-----TIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDEL---RRQ 349 (387)
T ss_dssp TGGGCC--------GGGSEEEECCCCH-----HHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH---HHC
T ss_pred HHhhcccCCCC--cccccEEEECCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHH---HHh
Confidence 9999 988 666 999995544 34555666665331 22221 234567999988866665543 222
Q ss_pred CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEccC
Q 013946 380 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 432 (433)
Q Consensus 380 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~~ 432 (433)
.+.+. . .....+.++..+||-|-+..+++|+..
T Consensus 350 -~~~~G------------------~-~g~~~d~vll~~fG~G~t~~~~ll~~~ 382 (387)
T 3oit_A 350 -RKEAA------------------A-AGEWPELGVMMAFGPGMTVDAMLLHAT 382 (387)
T ss_dssp ------------------------------CCEEEEEEEETTTEEEEEEEEEC
T ss_pred -hhccC------------------C-CCCCCCEEEEEEecccceeeeeeeEec
Confidence 22110 0 000125677889999999999998753
No 72
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.74 E-value=5.3e-16 Score=153.76 Aligned_cols=261 Identities=12% Similarity=0.087 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC
Q 013946 93 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 172 (433)
Q Consensus 93 ~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 172 (433)
..|+.+|+++||+++|+++++|| .||++++.+ ...+..+.+++..||
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~--------------------------~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQIT-------HMVSTTCTD--------------------------SANPGYDHYVAKELG 157 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSC--------------------------CCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC--------------------------CCCCcHHHHHHHHhC
Confidence 57999999999999999999888 888888641 122345889999999
Q ss_pred CCC-C-ccee-cccchHHHHHHHHHHHHHHc----CCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccC
Q 013946 173 WMG-P-NYSI-STACATSNFCILNAANHIIR----GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 245 (433)
Q Consensus 173 l~G-p-~~~v-~~acas~~~Al~~A~~~i~~----G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~ 245 (433)
++. + .+.| +.+|++++.||..|..+|++ |.++.|||+++|.+.....+ ....... ..+.
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~~-------------~~~d 223 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDA-------------LQET 223 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHHH-------------HTCC
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-ccccccc-------------cccc
Confidence 986 4 5788 79999999999999999997 99999999999984322211 1111000 0122
Q ss_pred CCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCCCC-------------CCCC-----hHHHHHHHHHH
Q 013946 246 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------------PHPD-----GVGVILCIEKA 307 (433)
Q Consensus 246 ~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-------------~~~~-----~~~~~~ai~~a 307 (433)
....+++||||+|+||++.+... .....+..+.++........... ..+. ...+..+++++
T Consensus 224 ~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~ 302 (465)
T 3e1h_A 224 RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADL 302 (465)
T ss_dssp CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHH
Confidence 34568899999999998753210 00122234555433211110000 0011 13455778888
Q ss_pred HHH-------cCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Ccccc-cchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 308 LAH-------SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 308 l~~-------agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v~-s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
|++ +|++++||||+ .|--+. .=.+++.+.++-.. ++..+ ..-..+||+.+|+=.+.|-.+ ++
T Consensus 303 L~~~g~~L~~agl~~~DId~~-~Hqan~-----rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~---~~ 373 (465)
T 3e1h_A 303 LSSLQDQLPSSYQKPADFDWA-MHPGGA-----TILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRL---RE 373 (465)
T ss_dssp HHHHGGGSCTTSCSGGGSEEE-ECCSSH-----HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH---TS
T ss_pred HHhccccccccCCCHHHceEE-ecCCCh-----HHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHH---HH
Confidence 887 67999999998 995443 44556666665321 11111 112345999888754444332 22
Q ss_pred c--CCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 379 T--GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 379 ~--~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
. +.+.|. .+ ..+.++..+||-|=+..+++|+.
T Consensus 374 ~~~g~l~~G-------------------g~--~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 374 KDMDALAPG-------------------GK--VKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp TTTTSCSSS-------------------SC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred hcccccCCC-------------------CC--CCCEEEEEEEhHHHhhhheeeEE
Confidence 2 222110 00 12567778898877777777763
No 73
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.72 E-value=5.2e-16 Score=151.02 Aligned_cols=263 Identities=11% Similarity=0.063 Sum_probs=164.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|+++++.+ ...+..+..++..
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId-------~li~~t~t~--------------------------~~~p~~a~~v~~~ 126 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQIT-------HMVSTTCTD--------------------------SANPGYDHYVAKE 126 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSC--------------------------CCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------CCCCCHHHHHHHH
Confidence 4568999999999999999999888 889888641 1123458899999
Q ss_pred hCCCC-C-ccee-cccchHHHHHHHHHHHHHHc----CCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccc
Q 013946 171 LGWMG-P-NYSI-STACATSNFCILNAANHIIR----GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 243 (433)
Q Consensus 171 lgl~G-p-~~~v-~~acas~~~Al~~A~~~i~~----G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pf 243 (433)
||+++ + .+.| +.+|++++.||..|.++|++ |+++.+||+++|.+. ...-....... ...
T Consensus 127 LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~a~~~~G~~~~vLvv~~E~~s-~~~~~~~~~~~-------------~~~ 192 (379)
T 3euo_A 127 LGLSDRLEKVLLHGIGASGGLAALRTAANLCLGHTARGKPARILVLALEVST-TMVRSELESID-------------ALQ 192 (379)
T ss_dssp HTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCG-GGHHHHHHHHH-------------HHC
T ss_pred cCCCCCeeEEEeeCchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEEEeeh-hhhcCcccccc-------------ccH
Confidence 99987 4 5888 79999999999999999997 999999999999843 32111111100 001
Q ss_pred cCCCCCcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccCCCCC-------------CCCCCC-----hHHHHHHHH
Q 013946 244 DINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM-------------TEPHPD-----GVGVILCIE 305 (433)
Q Consensus 244 d~~~~G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~-------------~~~~~~-----~~~~~~ai~ 305 (433)
+.....+++||||+|+||++.+... ........+.++......... ....+. ...+..+++
T Consensus 193 ~d~~~~~LFGDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 271 (379)
T 3euo_A 193 ETRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYA 271 (379)
T ss_dssp CCCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCGGGEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhcceeecCccEEEEEecCCCCc-cccccceeeeceeEEEecCchhhcCceecCCCcEEEeChHHHHHHHHHHHHHHH
Confidence 2233567899999999999754211 011222345544322111100 000011 134567788
Q ss_pred HHHHH-------cCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCC-Cccc-ccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 306 KALAH-------SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 306 ~al~~-------agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~-~~~v-~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
++|++ +|++++||||+ .|--+. .=.+++.+.++-.. ++.. -..-..+||+.+|+=.+.|-.+.
T Consensus 272 ~~L~~~~~~l~~~gl~~~did~~-~Hq~n~-----~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~-- 343 (379)
T 3euo_A 272 DLLSSLQDQLPSSYQKPADFDWA-MHPGGA-----TILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLR-- 343 (379)
T ss_dssp HHHHHHGGGSCTTSCSGGGSEEE-ECCSSH-----HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHT--
T ss_pred HHHHhcCcccccccCChhHeeEE-eCCCCh-----HHHHHHHHHhCCCHHHHHHHHHHHHhcCccHHHHHHHHHHHHH--
Confidence 88886 58999999988 995443 44556666665321 1211 11113469998887555544432
Q ss_pred HHcC--CcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEcc
Q 013946 377 IRTG--WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 431 (433)
Q Consensus 377 l~~~--~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~~ 431 (433)
+.+ .+.| . .+ ..+.++..+||.|=+..+++|+.
T Consensus 344 -~~g~~~l~~-----------------G--g~--~~d~vll~~fG~G~t~~~~ll~~ 378 (379)
T 3euo_A 344 -EKDMDALAP-----------------G--GK--VKEYVVGCAFGPGINVEMCMLKR 378 (379)
T ss_dssp -SHHHHTTCG-----------------G--GC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred -hhcccccCC-----------------C--CC--CCCeEEEEEECcccEeEEEEEEe
Confidence 221 1100 0 00 12567778999887777777763
No 74
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.66 E-value=6.2e-16 Score=150.57 Aligned_cols=264 Identities=14% Similarity=0.137 Sum_probs=162.0
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+.|.|+|+|...|.- .+.+++.+.+ |.+. .++ ..... +.. ..+..+ -.....|+.+|+
T Consensus 6 m~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~----~~~-~~~~G------i~~---r~~~~~-----~e~~~~La~~Aa 64 (388)
T 3v4n_A 6 MTIGIDKISFFVPPYYIDMTALAEAR--NVDP----GKF-HIGIG------QDQ---MAVNPI-----SQDIVTFAANAA 64 (388)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHT--TSCT----HHH-HTTTC------CCE---EECCCT-----TCCHHHHHHHHH
T ss_pred eeEEEEEEEEECCCeEEcHHHHHHHh--CCCH----HHH-HHHhC------ceE---EEECCC-----CCCHHHHHHHHH
Confidence 479999999999996 5777776543 2110 000 00000 000 000011 112568999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC--Ccc
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNY 178 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~ 178 (433)
++||+++| +++|| .|++++..+. ......+..++..||+++ +++
T Consensus 65 ~~aL~~a~--~~~Id-------~li~~t~t~~-------------------------~~~ps~a~~v~~~LGl~~~~~~~ 110 (388)
T 3v4n_A 65 EAILTKED--KEAID-------MVIVGTESSI-------------------------DESKAAAVVLHRLMGIQPFARSF 110 (388)
T ss_dssp HTTCCHHH--HHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHhCC--cccCC-------EEEEEeccCC-------------------------CcCccHHHHHHHHcCCCCCceEe
Confidence 99999987 77777 7888876421 112345889999999975 788
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
.++.+|++++.||..|..+|++|.++.+||+++|.+... ++ ..+..++||||+|
T Consensus 111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~-------------------------~~-~~~~~lfGDGA~A 164 (388)
T 3v4n_A 111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG-------------------------LN-SGGEPTQGAGAVA 164 (388)
T ss_dssp EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC-------------------------TT-CTTGGGCEEEEEE
T ss_pred ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc-------------------------CC-CCCCCccccceeE
Confidence 899999999999999999999999999999999983211 11 1135789999999
Q ss_pred EEecchHHHHhcCCeEEEEEEE-eeeccCCCCCCC------CCCCh--------HHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 259 LLLEELEHAKKRGAKIYAEFRG-GSFTSDAYHMTE------PHPDG--------VGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g-~~~~~d~~~~~~------~~~~~--------~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
+||++.. .+...-.. .+...+...... +..++ ..+..+++++|+++|++++|||++..
T Consensus 165 ~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~ 237 (388)
T 3v4n_A 165 MLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAF 237 (388)
T ss_dssp EEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEE
T ss_pred EEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEe
Confidence 9998632 12211111 111112111001 11122 34557899999999999999999999
Q ss_pred ccCCCCCCCHHHH-------HHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 324 HATSTPAGDIKEY-------QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 324 h~~gt~~~D~~E~-------~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
|-......-..-. +.+.+.++... -+....-..+||+.+||=.+.|..++
T Consensus 238 Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~-e~~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 238 HIPYTKMGKKALLAKISDQTEAEQERILARY-EESIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp CCSSHHHHHHHHHHHSTTSCHHHHHHHHHHH-HHHTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHhcccHHHHHHhCCCH-HHHhhHHHhcCchHHHHHHHHHHHHH
Confidence 9744331111000 12222222110 01122345679999998666655543
No 75
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.64 E-value=2.8e-14 Score=139.59 Aligned_cols=241 Identities=13% Similarity=-0.003 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHH
Q 013946 91 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 170 (433)
Q Consensus 91 ~~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 170 (433)
....|+.+|+++||+++|+++++|| .|+++++.+ . ..+..+.+++..
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~---------------------~-----~~P~~a~~v~~~ 182 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD-------CLITSNSTT---------------------P-----ALPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECCSS---------------------C-----CSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEccCC---------------------C-----CcCHHHHHHHHH
Confidence 4668999999999999999999888 899988642 1 123457899999
Q ss_pred hCCCC--Cccee-cccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCC
Q 013946 171 LGWMG--PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 247 (433)
Q Consensus 171 lgl~G--p~~~v-~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 247 (433)
+|++. +.+.+ +.+|+|++.||..|+++|++|.++.+||+|+|.+... .++ +++.
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~----------------------~~~-~d~~ 239 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTT----------------------YQP-ADDT 239 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG----------------------CCS-SCCS
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc----------------------cCc-cccc
Confidence 99986 35677 9999999999999999999999999999999984211 011 1112
Q ss_pred C-----CcccccceeEEEecchHHHHhcCCeEEEEEEEeeeccC--CCCC-----------CCCCCC----hHHHHHHHH
Q 013946 248 D-----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD--AYHM-----------TEPHPD----GVGVILCIE 305 (433)
Q Consensus 248 ~-----G~~~geGaaalvL~~~~~A~~~g~~i~a~i~g~~~~~d--~~~~-----------~~~~~~----~~~~~~ai~ 305 (433)
. ..++||||+|+||++.+. .. ...++.+...... .... ...+.. -..+..+++
T Consensus 240 ~~~lv~~~LFGDGAaAvvl~~~~~----~~-~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~ 314 (413)
T 3v7i_A 240 LESLIVRLLFADTAVAAVVTGRPR----PE-SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMW 314 (413)
T ss_dssp TTHHHHHHHBCCEEEEEEEESSCC----TT-EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhhhhcceeeccccEEEEEEecCC----CC-CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHH
Confidence 2 678999999999986432 01 1224444432211 1000 001111 123556888
Q ss_pred HHHH------HcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHc--CC-CCcc-cccchhhhhhHhhhHHHHHHHHHHH
Q 013946 306 KALA------HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFG--QN-RGLR-VNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 306 ~al~------~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~--~~-~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
++|+ ++|++ ||++..|-.+. .=.+++.+.++ -. .++. ....-. +||+.+|+=.+.|-.+.
T Consensus 315 ~~L~~~~~~~~~gl~---id~~v~Hq~~~-----~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~- 384 (413)
T 3v7i_A 315 EWLRVRYEDDPSSWH---PDVLLAHPGGT-----RVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH- 384 (413)
T ss_dssp HHHHHHTSSSCTTCC---CCEEEEECSSH-----HHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-
T ss_pred HHHhhccccccCCCc---eeEEEECCCCh-----HHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-
Confidence 9999 89987 99999995444 44566667776 32 2221 122334 79999888666555543
Q ss_pred HHHcCCcCCCCCCCCCCCCCCCccccCCcccccCccEEEEecccccceeeeeEEc
Q 013946 376 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 430 (433)
Q Consensus 376 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl~ 430 (433)
+. .+ .+.+.++..+||.|=+..+++++
T Consensus 385 --~~-~~-------------------------~~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 385 --DA-GQ-------------------------KTGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp --HH-CC-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --hC-CC-------------------------CCCCEEEEEEECHHHhHhhhheE
Confidence 22 11 01245677899987777777765
No 76
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.63 E-value=2.4e-15 Score=147.59 Aligned_cols=260 Identities=13% Similarity=0.101 Sum_probs=160.9
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..|.|+|+|...|.- .+.+++.+.+ |.+ + +++ ..... +.. ..+..+ -.....|+++|+
T Consensus 35 m~v~I~~ig~ylP~~~v~n~el~~~~--g~~---~-~~i-~~~~G------i~~---r~~a~~-----~e~~~~La~~Aa 93 (425)
T 3sqz_A 35 MRIGIDKIGFTSSQYVLNMKDLAEAR--GED---P-QKF-SKGLL------LNA---LSIAPI-----TDDVVTLAAGSA 93 (425)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHH--TCC---H-HHH-HTTTC------CCE---EEECCT-----TSCHHHHHHHHH
T ss_pred CeEEEEEEEEECCCcEEcHHHHHHHh--CCC---H-HHH-HHHcC------eEE---EEECCC-----CCCHHHHHHHHH
Confidence 479999999999996 5777776543 211 0 000 00000 000 000001 112567999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC--Ccc
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNY 178 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~ 178 (433)
++||+++| +++|| .|++++..+. ......+..++..||+++ +++
T Consensus 94 ~~aL~~ag--~~dId-------~li~~t~t~~-------------------------~~~ps~a~~v~~~LGl~~~~~~~ 139 (425)
T 3sqz_A 94 NEILTAED--KEKID-------MVILATESSV-------------------------DQSKAGAVYVHSLLGIQPFARSF 139 (425)
T ss_dssp HTTCCHHH--HHHEE-------EEEEECSCCS-------------------------CSSSCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHhCC--hhhCC-------EEEEEecccc-------------------------cccchHHHHHHHHhCCCCCeeEE
Confidence 99999998 77787 7888876421 112345889999999975 788
Q ss_pred eecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccceeE
Q 013946 179 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 258 (433)
Q Consensus 179 ~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGaaa 258 (433)
.+..+|++++.||..|..+|++|.++.+||+++|..... ++. .+..++||||+|
T Consensus 140 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~~-------------------------~~~-~~~~lfGDGA~A 193 (425)
T 3sqz_A 140 EMKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKYG-------------------------IGT-PGESTQGAGSIA 193 (425)
T ss_dssp EECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECCC-------------------------TTS-GGGGGCEEEEEE
T ss_pred EEcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhccc-------------------------CCC-CCCCcccceeeE
Confidence 899999999999999999999999999999999983211 111 136789999999
Q ss_pred EEecchHHHHhcCCeEEEEEEE-eeeccCCCC---C---CCCCCCh--------HHHHHHHHHHHHHcCCCCCCccEEEe
Q 013946 259 LLLEELEHAKKRGAKIYAEFRG-GSFTSDAYH---M---TEPHPDG--------VGVILCIEKALAHSGVSREDVNYINA 323 (433)
Q Consensus 259 lvL~~~~~A~~~g~~i~a~i~g-~~~~~d~~~---~---~~~~~~~--------~~~~~ai~~al~~agl~~~dId~v~~ 323 (433)
+||++.. .+.....+ .+...+... . ..+..++ ..+..+++++|+++|++++|||++..
T Consensus 194 ~ll~~~~-------~il~~~~~s~~~~~d~~df~~p~~~~~~~~dG~~~~~~~~~~l~~~~~~~l~~~gl~~~Did~~v~ 266 (425)
T 3sqz_A 194 MLVKKDP-------RILILHDETLAQTRDIMDFWRPNYTTTPYVNGMYSTKQYLDMLKTTWAEYQKRFDVSLTDFAAFCF 266 (425)
T ss_dssp EEEEESC-------SSEEECSCCEEEECCCCSEECCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred EEeecCC-------ceEEEEeecccchhhcccccccCCCcceeeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 9998632 22211111 111112111 0 0111133 23457899999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHH------------HcCCCCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 324 HATSTPAGDIKEYQALIHC------------FGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 324 h~~gt~~~D~~E~~al~~~------------~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
|-.++. .-.++..+. ++... -+....-..+||+.+||=.+.|..++
T Consensus 267 Hqp~~k----~~~ka~~ril~~~~~~~~~~~l~~~~-e~~~~~~~~~GNt~sASi~l~L~~~l 324 (425)
T 3sqz_A 267 HLPFPK----LALKGFNKIMDKQVPSDLQEKLKVNF-EASILYSKQIGNIYTGSLFLGLLSLL 324 (425)
T ss_dssp CCSSHH----HHHHHHHHHCCTTSCHHHHHHHHHHH-HHHHTTHHHHBCCGGGHHHHHHHHHH
T ss_pred CCCcch----hHHHHHHHHHhccchHHHHHHhCCCH-HHHhhHHhccCccHHHHHHHHHHHHH
Confidence 975543 111122222 11100 00112345679999988666555543
No 77
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.61 E-value=1.6e-14 Score=135.45 Aligned_cols=188 Identities=19% Similarity=0.156 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHh
Q 013946 92 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 171 (433)
Q Consensus 92 ~~~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 171 (433)
...|+.+|+++||++||+++++|| .||+|+... + ...+..++..+
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-------~II~gt~t~---------------------q-------~~~A~~va~~L 99 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-------IFLAGDLLN---------------------Q-------NVTANYVARHL 99 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-------EEEEEESSS---------------------S-------STTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC---------------------c-------hhHHHHHHHHh
Confidence 467999999999999999999888 889887531 0 11466677777
Q ss_pred CCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcc
Q 013946 172 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 251 (433)
Q Consensus 172 gl~Gp~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 251 (433)
++ |.+.|+++|+|++.||..|..+|++|.++.+||+|+|.+........|.. ..+..+|.. ...
T Consensus 100 gi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~----------e~g~q~p~t----a~~ 163 (347)
T 3lma_A 100 KI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT----------EYGGQKPGT----ATS 163 (347)
T ss_dssp CC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC------------------------------
T ss_pred CC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc----------hhcccCCch----hcE
Confidence 54 89999999999999999999999999999999999998543211100000 001122322 233
Q ss_pred cccceeEEEecchHHHHhcCCeEEEEEEEee--eccCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 252 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGS--FTSDAYHMTEPHPDG----VGVILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 252 ~geGaaalvL~~~~~A~~~g~~i~a~i~g~~--~~~d~~~~~~~~~~~----~~~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
.++||+|+||++.. ..+ +|.+.. ...| .....+...+ .....+|.+.|+++|++|+|+|+|.+++
T Consensus 164 t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgd 234 (347)
T 3lma_A 164 TVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGD 234 (347)
T ss_dssp CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred EccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCC
Confidence 46899999998542 222 233322 2222 1111111112 2345678999999999999999999754
Q ss_pred CCCCCCCHHHHHHHHHHHc
Q 013946 326 TSTPAGDIKEYQALIHCFG 344 (433)
Q Consensus 326 ~gt~~~D~~E~~al~~~~~ 344 (433)
.+. +-.+-+.+++.
T Consensus 235 L~q-----~g~~il~~l~~ 248 (347)
T 3lma_A 235 LSG-----VGSPILKDLLK 248 (347)
T ss_dssp CHH-----HHHHHHHHHHH
T ss_pred hHH-----HHHHHHHHHHH
Confidence 433 22233566664
No 78
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.61 E-value=1.5e-14 Score=144.34 Aligned_cols=226 Identities=15% Similarity=0.162 Sum_probs=142.1
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
..|.|.|+|..+|.- .+.+++.+.+ |.+. ..+ ..... +..+. +..+ -.....|+++|+
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~--g~~~----~~~-~~~~G------i~~r~---~~~~-----~e~~~~La~~Aa 81 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYD--GVDA----GKY-TIGLG------QAKMG---FCTD-----REDINSLCMTVV 81 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHH--TCCT----TCC-CCCCC------CCEEE---CCCT-----TCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeEecHHHHHHHh--CCCh----hHh-ecccC------ceEEE---eCCC-----CCCHHHHHHHHH
Confidence 468999999999986 5777776553 2210 000 00000 11000 0011 122468999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhC---CCC-C
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG---WMG-P 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg---l~G-p 176 (433)
++||+++|+++++|+ .|++++..+. ......+..++..|+ +.. +
T Consensus 82 ~~aL~~agi~~~dId-------~li~~T~t~~-------------------------~~~ps~a~~v~~~L~~lG~~~~~ 129 (478)
T 2p8u_A 82 QNLMERNNLSYDCIG-------RLEVGTETII-------------------------DKSKSVKTNLMQLFEESGNTDIE 129 (478)
T ss_dssp HHHHHHTTCCGGGEE-------EEEEECSCCS-------------------------CSSSCHHHHHGGGTTTTTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEccCCc-------------------------ccCccHHHHHHHHHhhcCCCCce
Confidence 999999999998887 7888876421 112345677885544 444 7
Q ss_pred cceecccchHHHHHHHHHHHHHHcCC--CCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGE--ANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~--~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
++.+.++|++++.||..|..+|++|. .+.+||+++|.. . |.......++||
T Consensus 130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------~-----------~~~~~~~~~fGd 182 (478)
T 2p8u_A 130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------V-----------YATGNARPTGGV 182 (478)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------C-----------CCSSTTGGGCEE
T ss_pred EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------c-----------ccCCCCCCcccc
Confidence 78899999999999999999999999 999999999941 0 112224578999
Q ss_pred ceeEEEecchHHHHhcCCeEEEE-EEEeeeccCCCCCCC-------CCCChHHH-----------HHHHHHHHH------
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTE-------PHPDGVGV-----------ILCIEKALA------ 309 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~-i~g~~~~~d~~~~~~-------~~~~~~~~-----------~~ai~~al~------ 309 (433)
||+|+||++.+. .++.. +.|.. ..+...... +..++... ...+++.++
T Consensus 183 GA~A~Ll~~~~~------~~l~~~~~gs~-~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~ 255 (478)
T 2p8u_A 183 GAVALLIGPNAP------LIFERGLRGTH-MQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKE 255 (478)
T ss_dssp EEEEEEEESSCS------EEECTTCCEEE-ECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCC------ceEeeccceec-ccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 999999985321 01000 01211 111221111 11223211 134566666
Q ss_pred --HcCCCCCCccEEEeccCCCCCCCHH
Q 013946 310 --HSGVSREDVNYINAHATSTPAGDIK 334 (433)
Q Consensus 310 --~agl~~~dId~v~~h~~gt~~~D~~ 334 (433)
++|++++|||++..|..+..+.+..
T Consensus 256 ~~~~g~~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 256 GNDKDFTLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp TCCCCCCGGGCSEEEECCSSHHHHHHH
T ss_pred ccccCCChHHcCEEEecCCcHHHHHHH
Confidence 6799999999999998877655544
No 79
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.58 E-value=3.7e-14 Score=139.48 Aligned_cols=222 Identities=15% Similarity=0.116 Sum_probs=141.7
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+.|.|+|+|...|.- .+.+++.+.+ |.+.++.. .+.. +..+. +..+ -.....|+++|+
T Consensus 4 ~~vgI~gig~ylP~~~v~n~el~~~~--g~~~~~~~-----~Gig------~r~~~---va~~-----~E~~~~La~~Aa 62 (460)
T 2v4w_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVEAGKYT-----VGLG------QTRMG---FCSV-----QEDINSLCLTVV 62 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCCTTCCC-----CCCC------CCEEE---CCCT-----TCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCcEecHHHHHHHh--CCCHHHee-----eeee------eEEEE---ECCC-----CCCHHHHHHHHH
Confidence 578999999999996 5777776543 32211100 0000 00000 0011 112467999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCC---C-C
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM---G-P 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~---G-p 176 (433)
++||+++|+++++|| .|++++..+ .......+..++..||+. . +
T Consensus 63 ~~AL~~agi~~~dId-------~IivaT~t~-------------------------~~~~ps~A~~v~~~LGl~g~~~~~ 110 (460)
T 2v4w_A 63 QRLMERIQLPWDSVG-------RLEVGTETI-------------------------IDKSKAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHTCCGGGEE-------EEEEECSCC-------------------------SCSSSCHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEecCC-------------------------CCCCCcHHHHHHHHhCCCCCCCcE
Confidence 999999999999888 889988642 112234578899999983 2 6
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCC--CEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCccccc
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 254 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ge 254 (433)
++.+..+|++++.||..|..+|++|.+ +.+||+|+|... . .+++. -...||
T Consensus 111 a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s-~-----------------------~~~~~---r~t~GD 163 (460)
T 2v4w_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV-Y-----------------------PSGNA---RPTGGA 163 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC-C-----------------------CSSTT---GGGCEE
T ss_pred EEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc-c-----------------------cCCCC---Cccccc
Confidence 788999999999999999999999996 999999999731 0 00111 122499
Q ss_pred ceeEEEecchHHHHhcCCeEEEEEEEeeecc----CCCCC----CCCCCChH--------HHHHH-------HHHHHHH-
Q 013946 255 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTS----DAYHM----TEPHPDGV--------GVILC-------IEKALAH- 310 (433)
Q Consensus 255 GaaalvL~~~~~A~~~g~~i~a~i~g~~~~~----d~~~~----~~~~~~~~--------~~~~a-------i~~al~~- 310 (433)
||+|+||+... .+...+...+... +.... ..+..+|. .+..+ ++++|++
T Consensus 164 GA~A~ll~~~~-------~l~~~~~~~Gs~~~~l~d~~~p~~~~~~~~mdG~~v~~~av~~l~~~~~~y~~~~~~~l~~~ 236 (460)
T 2v4w_A 164 GAVAMLIGPKA-------PLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQA 236 (460)
T ss_dssp EEEEEEEESSC-------SEEECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeEEEeecCC-------CceEEEcceecceeeeeccCCCCCCCCCeEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999998631 1211111111111 10011 01223442 23445 5666777
Q ss_pred ---cCCCCCCccEEEeccCCCCC
Q 013946 311 ---SGVSREDVNYINAHATSTPA 330 (433)
Q Consensus 311 ---agl~~~dId~v~~h~~gt~~ 330 (433)
+|++++||||+..|..-.++
T Consensus 237 ~~~~gl~~~did~~v~Hqan~ri 259 (460)
T 2v4w_A 237 GSDRPFTLDDLQYMIFHTPFCKM 259 (460)
T ss_dssp TCCCCCCGGGCSEEEECCSSHHH
T ss_pred ccccCCCHHHhceEeecCCchHH
Confidence 89999999999999765553
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=128.93 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=135.3
Q ss_pred CCEEEEecceecCcC-CCHHHHHHHHHcCCCCceeCCCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 013946 22 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 100 (433)
Q Consensus 22 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~l~l~aa 100 (433)
+.|.|+|+|..+|.- .+.+++.+.+ |.+ +.| +.... | +.. ..+.++. .....|++.|+
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~-----~~~----i~~~~-G-i~~---r~~~~~~-----E~~~~ma~~Aa 62 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVE-----AGK----YTVGL-G-QTR---MGFCSVQ-----EDINSLCLTVV 62 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTC----CCCCC-C-CCE---EECCCTT-----CCHHHHHHHHH
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHh--CCC-----HHH----HHHhh-C-cEE---EEECCCC-----CCHHHHHHHHH
Confidence 579999999999998 5777765532 211 011 00000 0 000 0001111 12467999999
Q ss_pred HHHHHhCCCCcccccccCCCeeEEEEeccCCchHHHHHHHHHHHhhcccCCCCcccccccchHHHHHHHHhCCCC----C
Q 013946 101 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG----P 176 (433)
Q Consensus 101 ~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G----p 176 (433)
++||+++|++|++|| .|+++|.+. .......+..+...||+.| +
T Consensus 63 ~~al~~a~i~~~~Id-------~ii~aT~t~-------------------------~~~~ps~a~~v~~~l~~~g~~~~~ 110 (460)
T 2wya_A 63 QRLMERIQLPWDSVG-------RLEVGTETI-------------------------IDKSKAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHTCCGGGEE-------EEEEECSCC-------------------------SCSSSCHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCC-------------------------CCCCCchHHHHHHHHhccCCCCee
Confidence 999999999998888 789998652 1223445778888887654 4
Q ss_pred cceecccchHHHHHHHHHHHHHHcCCCCEEEEecccCCcchhhhHHHHHhhhhhcCCCCCCCCCccccCCCCCcccccce
Q 013946 177 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 256 (433)
Q Consensus 177 ~~~v~~acas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~~~geGa 256 (433)
++.+..+|++++.||..|..+|++|..+.++|+.+.... + -|.........|+||
T Consensus 111 a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~--------------~-----------~~~d~~~~~~~GdGA 165 (460)
T 2wya_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI--------------A-----------VYPSGNARPTGGAGA 165 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE--------------E-----------CCCSSTTGGGCEEEE
T ss_pred EechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc--------------c-----------ccccccccccCcchH
Confidence 578999999999999999999999987654444332211 0 022333456789999
Q ss_pred eEEEecchHHHHhcCCeEEEEEE---EeeeccCCCC-------CCCCCCChHH-------------------HHHHHHHH
Q 013946 257 GVLLLEELEHAKKRGAKIYAEFR---GGSFTSDAYH-------MTEPHPDGVG-------------------VILCIEKA 307 (433)
Q Consensus 257 aalvL~~~~~A~~~g~~i~a~i~---g~~~~~d~~~-------~~~~~~~~~~-------------------~~~ai~~a 307 (433)
+|++++..+. + ..+. +... .+... ...+..++.. ...+++++
T Consensus 166 ~A~l~~~~~~-------~-~~~~~~~~~~~-~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~ 236 (460)
T 2wya_A 166 VAMLIGPKAP-------L-ALERGLRGTHM-ENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQA 236 (460)
T ss_dssp EEEEEESSCS-------E-EECTTCCEEEE-CCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhcccCCc-------c-eeecccccccc-cchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999985321 1 1111 1111 11111 1111122211 12345566
Q ss_pred HHHcCCCCCCccEEEeccCCCC
Q 013946 308 LAHSGVSREDVNYINAHATSTP 329 (433)
Q Consensus 308 l~~agl~~~dId~v~~h~~gt~ 329 (433)
+++++++++|+|++..|....+
T Consensus 237 l~~~~~~~~d~d~~v~Hqp~~r 258 (460)
T 2wya_A 237 GSDRPFTLDDLQYMIFHTPFCK 258 (460)
T ss_dssp TCCCCCCGGGCSEEEECCSSHH
T ss_pred HHHcCCCHHHHhhhhhcccchH
Confidence 6778999999999999976554
No 81
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=89.03 E-value=1.5 Score=42.12 Aligned_cols=100 Identities=10% Similarity=0.044 Sum_probs=58.3
Q ss_pred EEEEEeeeccCCCCC-CCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHM-TEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+... .... +..+-..+++++||+++|++++|||.+.+ ++.++.. ...-..-+...++-....+..
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~-g~~~~~~~~~~~a~~~~~~lGl~~~~p~~ 85 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVII-GNVLQTGLGQNVARQIAINAGIPNSVPSY 85 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECCCCSSTTCCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCcchHHHHHHHHcCCCCCceEE
Confidence 457777665433322 1112 22344578999999999999999998765 3332221 112233344444432122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
. =+..+++++..+..+..+++.|.
T Consensus 86 ~-----v~~~Css~~~al~~A~~~I~~G~ 109 (395)
T 4e1l_A 86 T-----VNKLCGSGLKSVQLAAQSITSGE 109 (395)
T ss_dssp E-----ECCGGGHHHHHHHHHHHHHHTTS
T ss_pred E-----ccccchHHHHHHHHHHHHHhCCC
Confidence 1 14567788889999999998875
No 82
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=88.22 E-value=1.7 Score=41.69 Aligned_cols=100 Identities=8% Similarity=-0.068 Sum_probs=58.2
Q ss_pred EEEEEeeeccCCCCC-CCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHM-TEPHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~~~~~-~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+... ..+.. ..+-..+++++||+++|++++|||.+.+ ++.++. ....-..-+...++-....+..
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~-g~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 87 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLL-GGVLTAGLGQNIARQIALGAGIPVEKPAM 87 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSCCTTSCSCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCCCCCchHHHHHHHHcCCCCCceEE
Confidence 457777665433321 11222 2344578999999999999999998765 332221 1122233344444432122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ +..+++++..+..+...++.|.
T Consensus 88 ~v-----~~aCss~~~al~~A~~~I~~G~ 111 (396)
T 4dd5_A 88 TI-----NIVCGSGLRSVSMASQLIALGD 111 (396)
T ss_dssp EE-----CCGGGHHHHHHHHHHHHHHHTS
T ss_pred Ee-----ccccHHHHHHHHHHHHHHhcCC
Confidence 21 3457788888888899998775
No 83
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=86.11 E-value=3.1 Score=39.70 Aligned_cols=100 Identities=8% Similarity=-0.115 Sum_probs=57.8
Q ss_pred EEEEEeeeccCCCCC-C-C-CCCChHHHHHHHHHHHHHc-CCCCCCccEEEeccCCCCCC--CHHHHHHHHHHHcCCCCc
Q 013946 276 AEFRGGSFTSDAYHM-T-E-PHPDGVGVILCIEKALAHS-GVSREDVNYINAHATSTPAG--DIKEYQALIHCFGQNRGL 349 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~-~-~~~~~~~~~~ai~~al~~a-gl~~~dId~v~~h~~gt~~~--D~~E~~al~~~~~~~~~~ 349 (433)
+.|.|.+.+.-+... . . ..+..+-..+++++||+++ |++++|||.+.+ |+.++.+ ...-..-+...++-....
T Consensus 4 v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~-g~~~~~~~~~~~~a~~~~~~~Gl~~~~ 82 (387)
T 3goa_A 4 VVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYW-GCVQQTLEQGFNIARNAALLAEIPHSV 82 (387)
T ss_dssp EEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEE-ECSCCSBTTTTTHHHHHHHHTTCCTTS
T ss_pred EEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEE-EcccCCcccccHHHHHHHHHcCCCCCC
Confidence 356676655433322 1 1 1222345678999999999 999999998765 3332221 112222333334422122
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
|... =+...+|++..+..+..+++.|.
T Consensus 83 p~~~-----v~~aCss~l~Al~~A~~~I~sG~ 109 (387)
T 3goa_A 83 PAVT-----VNRLCGSSMQALHDAARMIMTGD 109 (387)
T ss_dssp CCEE-----EECGGGHHHHHHHHHHHHHHTTS
T ss_pred cEeE-----ecCcchHHHHHHHHHHHHHhCCC
Confidence 2221 24567788999999999999875
No 84
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=85.55 E-value=2.4 Score=40.57 Aligned_cols=100 Identities=9% Similarity=0.026 Sum_probs=57.9
Q ss_pred EEEEEeeeccCCCCC-CCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHM-TEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+... ..+. ...+-..+++++||+++|++++|||.+.+ ++.++... ..-..-+...++-....+..
T Consensus 7 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~-g~~~~~~~~~~~a~~i~~~lGl~~~~p~~ 85 (394)
T 3ss6_A 7 VVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVIL-GHCIQRTDEANTARTAALAAGFPDTVTGY 85 (394)
T ss_dssp EEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSSCCGGGCSHHHHHHHHTTCCTTCEEE
T ss_pred EEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEE-EEccCCCccchHHHHHHHHcCCCCCceEE
Confidence 457776655433321 1112 22344578999999999999999998765 33332211 11223333334432122222
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
. =+..++|++..+..+..+++.|.
T Consensus 86 ~-----v~~aCss~~~al~~A~~~I~~G~ 109 (394)
T 3ss6_A 86 T-----IQRQCSSGMQAIMSAAMQIQLGV 109 (394)
T ss_dssp E-----EECGGGHHHHHHHHHHHHHHHTS
T ss_pred E-----ecCcchHHHHHHHHHHHHHhCCC
Confidence 2 24567788888989999998875
No 85
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=84.03 E-value=2.2 Score=39.96 Aligned_cols=78 Identities=9% Similarity=-0.037 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
+-..+++++||+++|++++|||.|.. ++.++ ...+.-...+...++-....+...+ ....++|+..+..+...
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v-----~~aC~s~~~al~~A~~~ 143 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIGLLIN-TSVSRDYLEPSTASIVSGNLGVSDHCMTFDV-----ANACLAFINGMDIAARM 143 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-CCSCCSCSSSCHHHHHHHHHTCCTTCEEEEC-----CCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCChHHHHHHHHhCCCCCceEEeE-----CCcCHHHHHHHHHHHHH
Confidence 44678999999999999999999765 44442 1222233445555654322232222 22466777778888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 144 i~~g~ 148 (345)
T 3s21_A 144 LERGE 148 (345)
T ss_dssp HHHTS
T ss_pred HHCCC
Confidence 88764
No 86
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=83.20 E-value=2.1 Score=39.88 Aligned_cols=78 Identities=17% Similarity=0.092 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+++++||+++|++++|||.|.. ++.++ ...+.-...+...++-....+...+ +...++|+..+..+...
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v-----~~~C~s~~~al~~A~~~ 140 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIV-ATSTPDFVFPSTACLLQNKLGIRNHGAAFDV-----QAVCSGFAYAVATADSF 140 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSSSBSCHHHHHHHHTTCCSCCEEEEE-----ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCCcHHHHHHHHhCCCCCCcEEEe-----CcccHHHHHHHHHHHHH
Confidence 45678999999999999999998765 34443 1122234445555554222332222 34566777788888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 141 i~~g~ 145 (333)
T 4dfe_A 141 IRSGQ 145 (333)
T ss_dssp HHTTS
T ss_pred HHcCC
Confidence 88764
No 87
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=81.16 E-value=6.1 Score=37.82 Aligned_cols=100 Identities=17% Similarity=0.088 Sum_probs=58.4
Q ss_pred EEEEEeeeccCCCCCC-CCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC--HHHHHHHHHHHcCCCCccc
Q 013946 276 AEFRGGSFTSDAYHMT-EPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD--IKEYQALIHCFGQNRGLRV 351 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~-~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D--~~E~~al~~~~~~~~~~~v 351 (433)
++|.|.+.+.-+.... ... ...+-..+++++||+++|++++|||.|.. ++.+.... ..-...+...++-....+.
T Consensus 4 v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~-g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 82 (401)
T 1ulq_A 4 AWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYA-GCANQAGEDNRNVARMALLLAGFPVEVAG 82 (401)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred eEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecccCCCCCChHHHHHHHHhCCCCCccE
Confidence 4577776654333211 111 12344568899999999999999997654 44332211 1223344444553211222
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..+ .+.++||+..+..+...++.|.
T Consensus 83 ~~v-----~~aCas~~~Al~~A~~~I~~G~ 107 (401)
T 1ulq_A 83 CTV-----NRLCGSGLEAVAQAARAIWAGE 107 (401)
T ss_dssp EEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred eec-----cccchHHHHHHHHHHHHHHCCC
Confidence 221 3457788888999999999875
No 88
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=80.76 E-value=2.9 Score=39.34 Aligned_cols=78 Identities=17% Similarity=-0.029 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||.|.. ++.++ ...+.-...+...++-....+... + +...++|+..+..+...
T Consensus 68 ~La~~Aa~~aL~~agi~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~----v-~~aC~s~~~al~~A~~~ 141 (354)
T 4efi_A 68 DLCRKAGEKLLAGLGWQADSIDALIF-VSQTPNYRLPATAFVLQAELDLPASCLALD----I-NLGCSGYPQALWLGMNL 141 (354)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSCSSSCHHHHHHHHTTCCTTSEEEE----E-CCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCCcHHHHHHHHcCcCCCccEEe----e-CcccHHHHHHHHHHHHH
Confidence 34578999999999999999998765 34333 112222344455555422233222 2 34456777778888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 142 i~~g~ 146 (354)
T 4efi_A 142 IQTGA 146 (354)
T ss_dssp HHTTS
T ss_pred HHCCC
Confidence 88764
No 89
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=80.53 E-value=5.7 Score=37.88 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=57.5
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC--CCCHHHHHHHHHHHcCCCCccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP--AGDIKEYQALIHCFGQNRGLRV 351 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~--~~D~~E~~al~~~~~~~~~~~v 351 (433)
+.|.|.+.+.-+.+... .....+-..+++++||+++|++++|||.+.+ |+.+. .+. .-...+...++-....|.
T Consensus 10 v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~-g~~~~~~~~~-~~a~~va~~lgl~~~~p~ 87 (395)
T 2ib8_A 10 VVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYM-GNVLQGGEGQ-APTRQAVLGAGLPISTPC 87 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCTTSCS-CHHHHHHHHTTCCTTCCE
T ss_pred eEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCc-hHHHHHHHHcCCCCCceE
Confidence 46788776654432211 1122345567899999999999999998654 22211 111 122333444543111221
Q ss_pred ccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 352 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 352 ~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..+ .+..+||+..+..+...++.|.
T Consensus 88 ~~v-----~~aCaS~~~Al~~A~~~I~~G~ 112 (395)
T 2ib8_A 88 TTI-----NKVCASGMKAIMMASQSLMCGH 112 (395)
T ss_dssp EEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred EEe-----cccccHHHHHHHHHHHHHHCCC
Confidence 111 3457788989999999999875
No 90
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=79.62 E-value=2.4 Score=40.81 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=53.4
Q ss_pred EEEEEeeeccCCCC--CCCCC-CChHHHHHHHHHHHHH-cCCCCCCccEEEeccCCCCCC--CHHHHHHHHHHHcCCCCc
Q 013946 276 AEFRGGSFTSDAYH--MTEPH-PDGVGVILCIEKALAH-SGVSREDVNYINAHATSTPAG--DIKEYQALIHCFGQNRGL 349 (433)
Q Consensus 276 a~i~g~~~~~d~~~--~~~~~-~~~~~~~~ai~~al~~-agl~~~dId~v~~h~~gt~~~--D~~E~~al~~~~~~~~~~ 349 (433)
+.|.|.+.+.-+.+ ..... +..+-..+++++||++ +|++++|||.+.. ++.++.+ ...-..-+...++-....
T Consensus 9 v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~-g~~~~~~~~~~~~a~~va~~lGlp~~~ 87 (407)
T 3svk_A 9 AFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMIL-GVVSPVGDQGGDIARTAVLAAGLPETT 87 (407)
T ss_dssp EEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEE-ECC--------CHHHHHHHHTTCCTTC
T ss_pred eEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEE-EecCccccccCcHHHHHHHHcCCCCCC
Confidence 45777766544421 11111 2233457899999999 9999999998765 3333321 112233344444432122
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
+...+ ...++||+..+..+..+++.|.
T Consensus 88 pa~~v-----~~~Css~~~Al~~A~~~I~sG~ 114 (407)
T 3svk_A 88 GGVQL-----NRFCASGLEAVNTAAQKVRSGW 114 (407)
T ss_dssp EEEEE-----C---CBSCCHHHHHHHHHHHTS
T ss_pred ceEEe-----cCcChhHHHHHHHHHHHHHcCC
Confidence 22221 4556677777788888888764
No 91
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=79.41 E-value=3 Score=39.47 Aligned_cols=78 Identities=15% Similarity=0.037 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||.|..- +.++ ...+.-...+...++-....+...+ ....++|+..+..+...
T Consensus 82 ~La~~Aa~~aL~~ag~~~~~Id~vi~~-t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v-----~~~C~s~~~Al~~A~~~ 155 (365)
T 3gwa_A 82 DLAYEAARKLFAQGAVGADQVDFVILC-TQAPDYVLPTSACMLQHRLGIPTHAGALDV-----NLGCSGYVYGLSLAKGL 155 (365)
T ss_dssp HHHHHHHHHHHHTTSCCGGGCCEEEEE-ESSCSCSBSCHHHHHHHHTTCCTTSEEEEE-----ECSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCCcHHHHHHHHcCCCCCceEEEe-----cccChHHHHHHHHHHHH
Confidence 345789999999999999999987652 3232 1122223445555554322332222 23466777788888888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 156 i~~g~ 160 (365)
T 3gwa_A 156 VETGA 160 (365)
T ss_dssp HHTTS
T ss_pred HHcCC
Confidence 88764
No 92
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=79.33 E-value=7.7 Score=37.35 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
+-..+++++||+++|++++|||.|.+ |+.++... ..-...+...++-....|...+ .+..+||+..+..+...
T Consensus 57 ~L~~~Aa~~AL~dAgl~~~~id~v~~-g~~~~~~~~~~~a~~~a~~lGl~~~~p~~~v-----~~aCss~~~Al~~A~~~ 130 (418)
T 2iik_A 57 ELLSAVMTAVLKDVNLRPEQLGDICV-GNVLQPGAGAIMARIAQFLSDIPETVPLSTV-----NRQCSSGLQAVASIAGG 130 (418)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEEE-ECSSSBGGGHHHHHHHHHHTTCCTTSCEEEE-----ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCccccccHHHHHHHHcCCCCCceEEEe-----CCCCHHHHHHHHHHHHH
Confidence 34568899999999999999997664 44443221 1222222233443111222111 45577889999999999
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 131 I~~G~ 135 (418)
T 2iik_A 131 IRNGS 135 (418)
T ss_dssp HHTTS
T ss_pred HHCCC
Confidence 99875
No 93
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=78.99 E-value=3.9 Score=37.81 Aligned_cols=77 Identities=14% Similarity=0.060 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||.+.. ++.++. ..+.-...+...++-. +.+... + ....++|+..+..+...
T Consensus 54 ~La~~Aa~~aL~~ag~~~~~Id~li~-~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~----v-~~aC~s~~~al~~A~~~ 126 (321)
T 3il6_A 54 DLCHQVAKQLLEKSGKQASEIDFILV-ATVTPDFNMPSVACQVQGAIGAT-EAFAFD----I-SAACSGFVYALSMAEKL 126 (321)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSCSSSCHHHHHHHHTTCT-TCEEEE----E-CCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCcCCCcHHHHHHHHcCCC-CceEEE----e-CcccHHHHHHHHHHHHH
Confidence 44568999999999999999998765 343321 1122233445555533 122222 2 24456677777788888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 127 i~~g~ 131 (321)
T 3il6_A 127 VLSGR 131 (321)
T ss_dssp HHTSS
T ss_pred HHCCC
Confidence 88763
No 94
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=78.52 E-value=4.8 Score=37.95 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+|+++||+++|++++|||+|.. ++.++ ...+.-...+...++-. ..+...+ +...++|+..|..+..
T Consensus 75 ~~La~~Aa~~aL~~agl~~~dId~vi~-~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v-----~~aC~s~~~Al~~A~~ 147 (359)
T 3h78_A 75 SALMVPAARQAIEAAGLLPEDIDLLLV-NTLSPDHHDPSQACLIQPLLGLR-HIPVLDI-----RAQASGLLYGLQMARG 147 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEE-ECSSCSSSBSCHHHHHHHHHTCC-SCCEEEE-----ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEE-EeCCCCCCCCcHHHHHHHHcCCC-CCcEEEE-----CCHhHHHHHHHHHHHH
Confidence 445678999999999999999998765 33333 11122234445555542 2222222 2345566777777778
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 148 ~i~sG~ 153 (359)
T 3h78_A 148 QILAGL 153 (359)
T ss_dssp HHHTTS
T ss_pred HHHCCC
Confidence 887764
No 95
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=78.47 E-value=7.3 Score=37.09 Aligned_cols=100 Identities=16% Similarity=0.056 Sum_probs=57.3
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEec-cCCCCCCCHHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAH-ATSTPAGDIKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h-~~gt~~~D~~E~~al~~~~~~~~~~~v~ 352 (433)
+.|.|.+.+.-+..... ..+..+-..+++++||+++|++++|||.+.+- .++...+. .-..-+...++-....|..
T Consensus 5 v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~-~~a~~ia~~lgl~~~~p~~ 83 (392)
T 2vu1_A 5 IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ-NPARQAAMKAGVPQEATAW 83 (392)
T ss_dssp EEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCS-CHHHHHHHHTTCCTTSEEE
T ss_pred EEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCc-HHHHHHHHHcCCCCCceEE
Confidence 45777766543332211 12223445688999999999999999986542 12221111 1223333444432112221
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
. =.+..+||+..+..+..+++.|.
T Consensus 84 ~-----v~~aCaSgl~Al~~A~~~I~~G~ 107 (392)
T 2vu1_A 84 G-----MNQLCGSGLRAVALGMQQIATGD 107 (392)
T ss_dssp E-----EECGGGHHHHHHHHHHHHHHTTS
T ss_pred E-----ecccchHHHHHHHHHHHHHHCCC
Confidence 1 24567888999999999999885
No 96
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=78.45 E-value=4.5 Score=37.51 Aligned_cols=77 Identities=12% Similarity=-0.011 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||.|.. ++.++.. .+.-...+...++-. +.+...+ ....++|+..+..+...
T Consensus 60 ~La~~Aa~~aL~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v-----~~~C~s~~~al~~A~~~ 132 (323)
T 3il3_A 60 TMGFEAAKNAIEAAQINPQDIELIIV-ATTSHSHAYPSAACQVQGLLNID-DAISFDL-----AAACTGFVYALSVADQF 132 (323)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEE-ECSCCSCSSSCHHHHHHHHTTCS-SCEEEEE-----CCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCccHHHHHHHHhCCC-CccEEEE-----CCccHHHHHHHHHHHHH
Confidence 44578999999999999999998765 4434321 122233444555532 2332222 23456677777788888
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 133 i~~g~ 137 (323)
T 3il3_A 133 IRAGK 137 (323)
T ss_dssp HHTTS
T ss_pred HHCCC
Confidence 88763
No 97
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=78.40 E-value=2.7 Score=39.79 Aligned_cols=78 Identities=19% Similarity=0.052 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
-..+++++||+++|++++|||.|.. ++.++...+.-...+...++-...++...+ .....++|+..+..+...++
T Consensus 98 la~~Aa~~al~~ag~~~~~id~vi~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v----~~~aCss~~~al~~A~~~i~ 172 (374)
T 2h84_A 98 LAQQACLRALKDWGGDKGDITHIVS-VTSTGIIIPDVNFKLIDLLGLNKDVERVSL----NLMGCLAGLSSLRTAASLAK 172 (374)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESSCCCSSCHHHHHHHHHTCCTTCEEEEE----ESCGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EeeCCCCCCcHHHHHHHHcCcCCCCceEEe----cCCcCHHHHHHHHHHHHHHH
Confidence 3457899999999999999998763 444332212223344455554322222111 11345677778888888888
Q ss_pred cCC
Q 013946 379 TGW 381 (433)
Q Consensus 379 ~~~ 381 (433)
.|.
T Consensus 173 ~g~ 175 (374)
T 2h84_A 173 ASP 175 (374)
T ss_dssp TCT
T ss_pred cCC
Confidence 774
No 98
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=76.93 E-value=4.2 Score=38.64 Aligned_cols=78 Identities=21% Similarity=0.061 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
-..+++++||+++|++++|||.|.. ++.++..-+.-...+...++-...++... +.....++|+..|..+...++
T Consensus 87 la~~Aa~~aL~~agl~~~~id~vi~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~----v~~~aCss~~~Al~~A~~~i~ 161 (382)
T 1u0m_A 87 RVPAVIQRALDDAELLATDIDVIIY-VSCTGFMMPSLTAWLINEMGFDSTTRQIP----IAQLGCAAGGAAINRAHDFCT 161 (382)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEE-ECSSSCCSSCHHHHHHHHTTCCTTCEEEE----ECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEE-EecCCCCCCcHHHHHHHHhCCCCCcceEE----ccCCcCHHHHHHHHHHHHHHH
Confidence 3457899999999999999998754 44443222222334455555332122111 113456677778888888888
Q ss_pred cCC
Q 013946 379 TGW 381 (433)
Q Consensus 379 ~~~ 381 (433)
.|.
T Consensus 162 ~g~ 164 (382)
T 1u0m_A 162 AYP 164 (382)
T ss_dssp HST
T ss_pred cCC
Confidence 774
No 99
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=76.77 E-value=3.8 Score=39.30 Aligned_cols=77 Identities=13% Similarity=-0.018 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|+++||+++|++++|||.|.. ++.++...+.-...+...++-...++ ... -....++|+..|..+...+
T Consensus 118 La~~Aa~~aL~~agl~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v~~aC~s~~~al~~A~~~i 191 (402)
T 3awk_A 118 LAKEAAISAIKQWGQPKSKITHLVF-ATTSGVDMPGADFQLAKLLGLRPTVKRVML-----YQQGAYAGATVLRVAKDLA 191 (402)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EECSCCCSSCHHHHHHHHHTCCTTCEEEEE-----ESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCcCChHHHHHHHHcCCCCccceeeE-----ECCccHHHHHHHHHHHHHH
Confidence 3467899999999999999998664 33332222222344555555432221 111 1234566777777787888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 192 ~sg~ 195 (402)
T 3awk_A 192 ENNK 195 (402)
T ss_dssp HTST
T ss_pred HcCC
Confidence 7764
No 100
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=76.37 E-value=4.7 Score=37.74 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHH-HHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAG-AVEAIAVVQA 376 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG-~~~l~~~~~~ 376 (433)
-..+|.++||+++|++++|||+|.. +|.|+ ...+.-...+.+.+|-.. .+...+ ..|++| +..|..+...
T Consensus 65 la~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~v~~~LGl~~-~~a~di------~~~C~g~~~aL~~A~~~ 136 (350)
T 4ewp_A 65 MAVGAAREALERAGLQGSDLDAVIV-STVTFPHATPSAAALVAHEIGATP-APAYDV------SAACAGYCYGVAQADAL 136 (350)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEE-ECSCCSCSSSCHHHHHHHHTTCTT-SCEEEE------ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCCchHHHHHHHhCCCC-ceEEEe------ecchhhHHHHHHHhhhh
Confidence 4468999999999999999998764 34443 223334445566666432 221111 123444 4455555555
Q ss_pred HHcC
Q 013946 377 IRTG 380 (433)
Q Consensus 377 l~~~ 380 (433)
++.+
T Consensus 137 i~~g 140 (350)
T 4ewp_A 137 VRSG 140 (350)
T ss_dssp HHTT
T ss_pred hhCC
Confidence 6654
No 101
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=76.31 E-value=2.7 Score=40.15 Aligned_cols=77 Identities=16% Similarity=0.024 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+++++||+++|++++|||.|.. ++.++..-+.-...+...++-...++...+ .....++|+..|..+...++.
T Consensus 117 a~~Aa~~aL~~agl~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v----~~~aCas~~~Al~~A~~~i~~ 191 (393)
T 1ted_A 117 AVDVSKRALAGLPYRAAEIGLLVL-ATSTGFIAPGVDVAIVKELGLSPSISRVVV----NFMGCAAAMNALGTATNYVRA 191 (393)
T ss_dssp HHHHHHHHHTTCCCCGGGEEEEEE-EESSCCCSSCHHHHHHHHHTCCTTCEEEEE----ESCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCccChHHHHHHHHcCcCCCcceeEe----ccchhHHHHHHHHHHHHHHHc
Confidence 457899999999999999998763 333332212223345555554322211111 134566778888888888887
Q ss_pred CC
Q 013946 380 GW 381 (433)
Q Consensus 380 ~~ 381 (433)
|.
T Consensus 192 G~ 193 (393)
T 1ted_A 192 HP 193 (393)
T ss_dssp ST
T ss_pred CC
Confidence 74
No 102
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=76.29 E-value=4.2 Score=39.17 Aligned_cols=77 Identities=14% Similarity=-0.010 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+|+++||+++|++++|||.|.. ++.|+..-+.-...+...+|-...++ . -.+.....++|+..|..+...++.
T Consensus 141 a~~Aa~~AL~~agi~~~dId~li~-~t~t~~~~P~~a~~v~~~LGl~~~~~--~--~~v~~~~Cagg~~AL~~A~~~i~a 215 (413)
T 3v7i_A 141 GERAARGALQIAGLDVADVDCLIT-SNSTTPALPGLDVALANRLPLRGDTM--L--LPATQWACVAGTRSLALAADLVAA 215 (413)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEE-ECCSSCCSSCHHHHHHHHTTCCTTCE--E--EEESSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHCCEEEE-EccCCCCcCHHHHHHHHHhCCCCCce--E--EEeeCCccHHHHHHHHHHHHHHhc
Confidence 468899999999999999999764 34333222222333444555332111 0 112244566677777777777776
Q ss_pred CC
Q 013946 380 GW 381 (433)
Q Consensus 380 ~~ 381 (433)
|.
T Consensus 216 g~ 217 (413)
T 3v7i_A 216 DP 217 (413)
T ss_dssp CT
T ss_pred CC
Confidence 53
No 103
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=76.08 E-value=9.5 Score=36.36 Aligned_cols=100 Identities=17% Similarity=0.044 Sum_probs=56.5
Q ss_pred EEEEEeeeccCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCCCcccc
Q 013946 276 AEFRGGSFTSDAYHMTE--PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 352 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~--~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~~~~v~ 352 (433)
++|.|.+.+.-+..... ..+..+-..+++++||+++|++++|||.+.+ |+.+.... ..-..-+...++-....|..
T Consensus 8 v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~-g~~~~~~~~~~~a~~ia~~lgl~~~~p~~ 86 (397)
T 1wl4_A 8 VVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIF-GHVLAAGCGQNPVRQASVGAGIPYSVPAW 86 (397)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCTTSCSCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCHHHHHHHHHcCCCCCccEE
Confidence 45777766543332211 1122344568899999999999999997654 33222110 11223333344421111211
Q ss_pred cchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 353 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 353 s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+ .+..+||+..+..+...++.|.
T Consensus 87 ~v-----~~aCaSg~~Ai~~A~~~I~~G~ 110 (397)
T 1wl4_A 87 SC-----QMICGSGLKAVCLAVQSIGIGD 110 (397)
T ss_dssp EE-----CCGGGHHHHHHHHHHHHHHTTS
T ss_pred Ee-----cCcChhHHHHHHHHHHHHHCCC
Confidence 11 3457788999999999999875
No 104
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=75.97 E-value=4 Score=38.88 Aligned_cols=77 Identities=10% Similarity=-0.058 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+++++||+++|++++|||+|.. ++.++..-+.-..-+...++-...++ ... -....++|+..|..+...+
T Consensus 105 La~~Aa~~aL~~agl~~~~Id~li~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v~~aC~~~~~al~~A~~~i 178 (389)
T 1i88_A 105 LGKEAAVKAIKEWGQPKSKITHLIV-CTTSGVDMPGADYQLTKLLGLRPYVKRYMM-----YQQGAFAGGTVLRLAKDLA 178 (389)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESSCCCSSCHHHHHHHHHTCCTTCEEEEE-----ESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EECCCCCCchHHHHHHHHcCcCCCchhhee-----ECCccHHHHHHHHHHHHHH
Confidence 3467899999999999999998764 33333222222334555555432221 111 1334566677777888888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 179 ~~g~ 182 (389)
T 1i88_A 179 ENNK 182 (389)
T ss_dssp HTST
T ss_pred HcCC
Confidence 8764
No 105
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=75.80 E-value=3.5 Score=38.44 Aligned_cols=70 Identities=10% Similarity=0.078 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+|+++||+++|++++|||+|.. ++.++.. .-...+.+.++ +|...+ ....++++..|..+...++.
T Consensus 59 a~~Aa~~AL~~AGi~~~DID~II~-gt~t~q~--~~A~~va~~Lg----ipafdV-----~~ACsg~~~AL~~Aa~~I~s 126 (347)
T 3lma_A 59 MEDAVQSALSKQNLKKEDIDIFLA-GDLLNQN--VTANYVARHLK----IPFLCL-----FGACSTSMESIAISSALIDG 126 (347)
T ss_dssp HHHHHHHHHHTTTCCGGGCSEEEE-EESSSSS--TTHHHHHHHHC----CCEEEB-----CCSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EeCCCch--hHHHHHHHHhC----CCEEEe-----cChhHHHHHHHHHHHHHHhc
Confidence 468999999999999999999875 4444422 11222333332 332221 12344566677778888887
Q ss_pred CC
Q 013946 380 GW 381 (433)
Q Consensus 380 ~~ 381 (433)
|.
T Consensus 127 G~ 128 (347)
T 3lma_A 127 GF 128 (347)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 106
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=75.06 E-value=2.6 Score=40.25 Aligned_cols=77 Identities=17% Similarity=0.101 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+|+++||+++|++++|||+|.. ++.++..-+.-...+...+|-..... ....-+...++|+..|..+...++.
T Consensus 100 a~~Aa~~AL~~ag~~~~dId~li~-~t~t~~~~p~~a~~v~~~LGl~~~~~----~~~~~~~~C~~~~~al~~A~~~i~s 174 (387)
T 3oit_A 100 AAEAAKKAIAEWGRPAADITHLVV-TTNSGAHVPGVDFRLVPLLGLRPSVR----RTMLHLNGCFAGCAALRLAKDLAEN 174 (387)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEE-EESSCCEESCHHHHHHHHHTCCTTCE----EEEEECCGGGHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EeeCCCCcccHHHHHHHHhCCCCCcc----eeeEECchhHHHHHHHHHHHHHHhc
Confidence 467899999999999999999764 34343222222334455555432111 0112244556667777777777877
Q ss_pred CC
Q 013946 380 GW 381 (433)
Q Consensus 380 ~~ 381 (433)
|.
T Consensus 175 g~ 176 (387)
T 3oit_A 175 SR 176 (387)
T ss_dssp ST
T ss_pred CC
Confidence 64
No 107
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=74.49 E-value=3.8 Score=38.93 Aligned_cols=76 Identities=11% Similarity=0.075 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
-..+|+++||+++|++++|||+|.+ +|.|...-+.-...+...+|-...... -.+.+...++|+..|..+...++
T Consensus 84 La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~p~~a~~v~~~LGl~~~~~~----~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 84 LAVEASRKAMAEARLVPAQITHMVS-TTCTDSANPGYDHYVAKELGLSDRLEK----VLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCCCSSCHHHHHHHHHTCCTTCEE----EEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCHHHHHHHHcCCCCCeeE----EEeeCchhhHHHHHHHHHHHHHH
Confidence 3457899999999999999999754 333322222233344555554321100 11122344556666666666665
Q ss_pred c
Q 013946 379 T 379 (433)
Q Consensus 379 ~ 379 (433)
.
T Consensus 159 a 159 (379)
T 3euo_A 159 G 159 (379)
T ss_dssp H
T ss_pred h
Confidence 3
No 108
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=74.19 E-value=2.6 Score=40.34 Aligned_cols=77 Identities=13% Similarity=0.028 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 379 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~ 379 (433)
..+|+++||+++|++++|||+|.. ++.|+..-+.-..-+...+|-....+ ....-....++|+..|..+...++.
T Consensus 106 a~~Aa~~aL~~ag~~~~dId~vi~-~t~t~~~~p~~a~~v~~~LGl~~~~~----~~~~v~~~C~g~~~al~~A~~~i~s 180 (393)
T 3ov2_A 106 AKEAAEKAIKEWGRPKSEITHLVF-CSISGIDMPGADYRLATLLGLPLTVN----RLMIYSQACHMGAAMLRIAKDLAEN 180 (393)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEE-EESSCCCBSCHHHHHHHHHTCCTTSE----EEEEESCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCCCCCHHHHHHHHcCCCCCcc----eeeEEcCccHHHHHHHHHHHHHHHc
Confidence 457899999999999999999764 33343322333344555555432211 0111134455667777777777776
Q ss_pred CC
Q 013946 380 GW 381 (433)
Q Consensus 380 ~~ 381 (433)
|.
T Consensus 181 g~ 182 (393)
T 3ov2_A 181 NR 182 (393)
T ss_dssp ST
T ss_pred CC
Confidence 63
No 109
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=73.23 E-value=4.8 Score=38.75 Aligned_cols=77 Identities=16% Similarity=0.020 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|+++||+++|++++|||+|.. ++.++...+.-...+...++-...++ ...+ ....++|+..|..+...+
T Consensus 123 La~~Aa~~aL~~agl~~~dId~li~-~t~~~~~~p~~a~~v~~~LGl~~~~~~~~~v-----~~aCas~~~AL~~A~~~i 196 (413)
T 2p0u_A 123 LAKEASMNAIKEWGRPKSEITHIVM-ATTSGVNMPGAELATAKLLGLRPNVRRVMMY-----QQGAFAGATVLRVAKDLA 196 (413)
T ss_dssp HHHHHHHHHHHHHTSCGGGCCEEEE-EESSCCCBSCHHHHHHHHHTCCTTCEEEEEE-----SCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHCCEEEE-EecCCcccCcHHHHHHHHhCCCCCcceEeEE-----CCccHHHHHHHHHHHHHH
Confidence 3467899999999999999998764 33332222222344555555432221 1111 234556777777777777
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 197 ~sg~ 200 (413)
T 2p0u_A 197 ENNA 200 (413)
T ss_dssp HHST
T ss_pred HhCC
Confidence 7764
No 110
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=72.66 E-value=5.4 Score=38.08 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|+++||+++|++++|||.|.. ++.++. ..+.-...+...++-. .+... + ....++|+..|..+...
T Consensus 119 ~La~~Aa~~AL~~agi~~~dId~vi~-~t~t~~~~~p~~a~~v~~~LGl~--~~~~d----v-~~aC~g~~~aL~~A~~~ 190 (392)
T 3led_A 119 EMAVTAAEQAIERWGKPRERIGAVLC-ACSNMQRAYPAMAIEVQNALGLG--GFAFD----M-NVACSSATFGLKTAADF 190 (392)
T ss_dssp HHHHHHHHHHHHHHCSCGGGEEEEEE-ESSCCSCSBSCHHHHHHHHTTCC--SEEEE----E-ECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCccHHHHHHHHHhCCC--CeEEE----E-CCccHHHHHHHHHHHHH
Confidence 34568999999999999999999775 444431 1222233344445431 22111 1 34456667777778788
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 191 i~~g~ 195 (392)
T 3led_A 191 VGGGS 195 (392)
T ss_dssp HHTTS
T ss_pred HHCCC
Confidence 88764
No 111
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=72.10 E-value=7.7 Score=35.46 Aligned_cols=78 Identities=19% Similarity=0.104 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+++++||+++|++++|||.|.. ++.++. ..+.-...+...++-.. .+... + ....++|+..+..+..
T Consensus 52 ~~l~~~a~~~al~~ag~~~~~id~vi~-~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~----v-~~aCas~~~al~~A~~ 124 (313)
T 1zow_A 52 SDLAYEASVKAIADAGIQPEDIDMIIV-ATATGDMPFPTVANMLQERLGTGK-VASMD----Q-LAACSGFMYSMITAKQ 124 (313)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCSCSSSCHHHHHHHHHTCCS-CCEEE----E-ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCCC-CcEEE----E-CCcCHHHHHHHHHHHH
Confidence 345568899999999999999998653 333321 11112334445555321 22222 2 3456788888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 125 ~i~~g~ 130 (313)
T 1zow_A 125 YVQSGD 130 (313)
T ss_dssp HHHTTS
T ss_pred HHHCCC
Confidence 898874
No 112
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=72.10 E-value=9.8 Score=36.17 Aligned_cols=100 Identities=12% Similarity=-0.099 Sum_probs=56.6
Q ss_pred EEEEEeeeccCCCCC-C-C-CCCChHHHHHHHHHHHHHc-CCCCCCccEEEeccCCCCCCC--HHHHHHHHHHHcCCCCc
Q 013946 276 AEFRGGSFTSDAYHM-T-E-PHPDGVGVILCIEKALAHS-GVSREDVNYINAHATSTPAGD--IKEYQALIHCFGQNRGL 349 (433)
Q Consensus 276 a~i~g~~~~~d~~~~-~-~-~~~~~~~~~~ai~~al~~a-gl~~~dId~v~~h~~gt~~~D--~~E~~al~~~~~~~~~~ 349 (433)
+.|.|.+.+.-+... . . ..+..+-..+++++||+++ |++++|||.+.. |+.+.... ..-...+...++-....
T Consensus 7 v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~-g~~~~~~~~~~~~a~~ia~~lgl~~~~ 85 (390)
T 1wdk_C 7 VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIW-GCVNQTLEQGWNIARMASLMTQIPHTS 85 (390)
T ss_dssp EEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEE-ECSSBSBTTTTTHHHHHHTTSSSCTTS
T ss_pred EEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEE-EeeccccCCCCcHHHHHHHHcCCCCCc
Confidence 457777765443321 1 1 1122345678899999999 999999987654 33322111 11122222223321111
Q ss_pred ccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 350 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 350 ~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
|. ..=.+..+||+..+..+...++.|.
T Consensus 86 p~-----~~v~~aCaS~~~Al~~A~~~I~~G~ 112 (390)
T 1wdk_C 86 AA-----QTVSRLCGSSMSALHTAAQAIMTGN 112 (390)
T ss_dssp EE-----EEEECGGGHHHHHHHHHHHHHHTTS
T ss_pred cE-----EEEcccchhHHHHHHHHHHHHHcCC
Confidence 11 1124567889999999999999885
No 113
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=71.85 E-value=7.8 Score=35.31 Aligned_cols=78 Identities=14% Similarity=-0.003 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+++++||+++|++++|||.|.. ++.++.. -+.-...+...++-.. .+...+ ....++|+..+..+..
T Consensus 51 ~~l~~~a~~~al~~ag~~~~~id~v~~-~~~~~~~~~~~~a~~v~~~lgl~~-~~~~~v-----~~~C~s~~~al~~A~~ 123 (309)
T 2ebd_A 51 TYMATQAAKEALREANLSPEELDLIIL-ATLTPQKRFPSTACLVQAQLKAKG-VYAFDI-----SAACSGFIYALDIADS 123 (309)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEE-ECSSCSSSSSCHHHHHHHHHTCTT-CEEEEE-----ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCCC-ceEEec-----CccchHHHHHHHHHHH
Confidence 445678999999999999999997664 3333211 1112344455555432 222221 3456788888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 124 ~i~~g~ 129 (309)
T 2ebd_A 124 FIKSGK 129 (309)
T ss_dssp HHHTTS
T ss_pred HHHCCC
Confidence 898774
No 114
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=71.57 E-value=5.5 Score=38.16 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|+++||+++|++++|||+|.. ++.++..-+.-...+...++-...++ ... -....++|+..|..+...+
T Consensus 110 La~~Aa~~aL~~agl~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v~~aCss~~~al~~A~~~i 183 (402)
T 1ee0_A 110 LGKEAAVKAIDEWGLPKSKITHLIF-CTTAGVDMPGADYQLVKLLGLSPSVKRYML-----YQQGAAAGGTVLRLAKDLA 183 (402)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-ECSSCCEESCHHHHHHHHHTCCTTCEEEEE-----CSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCChHHHHHHHHcCcCCCcceeeE-----ECchhHHHHHHHHHHHHHH
Confidence 3567899999999999999998764 34333211122344555555432221 111 1344566777787788888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 184 ~~g~ 187 (402)
T 1ee0_A 184 ENNK 187 (402)
T ss_dssp HHST
T ss_pred HcCC
Confidence 7764
No 115
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=71.36 E-value=16 Score=35.34 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=56.8
Q ss_pred EEEEEeeeccCCCCC--CCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHH----HHHHHHHHcCCCC
Q 013946 276 AEFRGGSFTSDAYHM--TEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE----YQALIHCFGQNRG 348 (433)
Q Consensus 276 a~i~g~~~~~d~~~~--~~~~-~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E----~~al~~~~~~~~~ 348 (433)
++|.|.+.+.-+... .... ....-..+++++||+++|++++|||.|.. |+.+ .|... ...+...++-...
T Consensus 32 v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~-g~~~--~~~~~~~~~a~~va~~lGl~~~ 108 (442)
T 2wu9_A 32 VVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVV-GTVL--APGSQRASECRMAAFYAGFPET 108 (442)
T ss_dssp EEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEE-ECCS--SBHHHHHHHHHHHHHHTTCCTT
T ss_pred eEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-Eeec--CccCCCChHHHHHHHHcCCCCC
Confidence 457777665433321 1111 22344578899999999999999997654 3333 33221 2223334443111
Q ss_pred cccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 349 LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 349 ~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+...+ .+.++||+..+..+...++.|.
T Consensus 109 ~p~~~v-----~~aCaSg~~Al~~A~~~I~sG~ 136 (442)
T 2wu9_A 109 VAVRTV-----NRQCSSGLQAVADVAAAIKAGF 136 (442)
T ss_dssp SCEEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred ceEEEe-----CCcCHHHHHHHHHHHHHHHCCC
Confidence 222111 3456788889999999999875
No 116
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=70.96 E-value=4.6 Score=38.76 Aligned_cols=77 Identities=10% Similarity=-0.070 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|+++||+++|++++|||.|.. ++.++...+.-..-+...++-...++ ... -....++|+..|..+...+
T Consensus 118 La~~Aa~~aL~~ag~~~~~Id~vi~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v~~aC~s~~~al~~A~~~i 191 (406)
T 2d3m_A 118 LGTEAAVKAIEEWGRPKSEITHLVF-CTSCGVDMPSADFQCAKLLGLHANVNKYCI-----YMQGAYAGGTVMRYAKDLA 191 (406)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESSCCEESCHHHHHHHHHTCCTTCEEEEE-----ESCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCHHHHHHHHcCcCCCcceeee-----EcCccHHHHHHHHHHHHHH
Confidence 3467899999999999999998764 33333211112334455555432221 111 1335566777787888888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 192 ~~g~ 195 (406)
T 2d3m_A 192 ENNR 195 (406)
T ss_dssp HTST
T ss_pred HcCC
Confidence 8764
No 117
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=70.41 E-value=9.1 Score=35.04 Aligned_cols=78 Identities=12% Similarity=0.079 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+++++||+++|++++|||.|.. ++.++.. .+.-..-+...++-.. .+... + ....++|+..+..+..
T Consensus 52 ~~l~~~a~~~al~~ag~~~~~id~vi~-g~~~~~~~~~~~a~~v~~~lgl~~-~~~~~----v-~~aCas~~~al~~A~~ 124 (317)
T 1hnj_A 52 STMGFEAATRAIEMAGIEKDQIGLIVV-ATTSATHAFPSAACQIQSMLGIKG-CPAFD----V-AAACAGFTYALSVADQ 124 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCSCSSSCHHHHHHHHHTCCS-SCEEE----E-CCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCCC-CeEEe----e-CcccHHHHHHHHHHHH
Confidence 345678999999999999999998553 3433311 1112334445555321 22222 2 3456778888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 125 ~i~~g~ 130 (317)
T 1hnj_A 125 YVKSGA 130 (317)
T ss_dssp HHHTTS
T ss_pred HHHCCC
Confidence 898874
No 118
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=70.03 E-value=5 Score=38.62 Aligned_cols=77 Identities=13% Similarity=0.028 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|+++||+++|++++|||.|.. ++.++..-+.-...+...++-...++ ...+ ....++|+..|..+...+
T Consensus 128 La~~Aa~~AL~~agl~~~~Id~li~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v-----~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 128 LAKEAAEKAIQEWGQSKSGITHLIF-CSTTTPDLPGADFEVAKLLGLHPSVKRVGVF-----QHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESCCCEESCHHHHHHHHHTCCTTCEEEEEE-----SCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EEeCCCccchHHHHHHHHcCcCCccchhcee-----cCccHHHHHHHHHHHHHH
Confidence 3467899999999999999998763 33333211112234455555432221 1111 334566777777777888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 202 ~~G~ 205 (413)
T 1xes_A 202 ENNR 205 (413)
T ss_dssp HTST
T ss_pred HcCC
Confidence 8764
No 119
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=69.28 E-value=20 Score=34.03 Aligned_cols=100 Identities=7% Similarity=-0.007 Sum_probs=56.1
Q ss_pred EEEEEeeeccCCCCC--CCCC-CChHHHHHHHHHHHHHcC----CCCCCccEEEeccCCCCCCC-HHHHHHHHHHHcCCC
Q 013946 276 AEFRGGSFTSDAYHM--TEPH-PDGVGVILCIEKALAHSG----VSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNR 347 (433)
Q Consensus 276 a~i~g~~~~~d~~~~--~~~~-~~~~~~~~ai~~al~~ag----l~~~dId~v~~h~~gt~~~D-~~E~~al~~~~~~~~ 347 (433)
+.|.|.+.+.-+.+. .... ...+-..+++++||+++| ++++|||.|.. ++.++... ..-...+...++-..
T Consensus 12 v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~-g~~~~~~~~~~~a~~va~~lGl~~ 90 (393)
T 1afw_A 12 VVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVAC-GNVLNVGAGATEHRAACLASGIPY 90 (393)
T ss_dssp EEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEE-ECSSSBGGGHHHHHHHHHHTTCCT
T ss_pred EEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEE-EecCCCCCCChHHHHHHHHcCCCC
Confidence 457776655433221 1111 123445688999999999 99999997654 44332111 112233334444311
Q ss_pred CcccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 348 GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 348 ~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
..|...+ .+..+||+..+..+...++.|.
T Consensus 91 ~~p~~~v-----~~aCasg~~Al~~A~~~I~~G~ 119 (393)
T 1afw_A 91 STPFVAL-----NRQCSSGLTAVNDIANKIKVGQ 119 (393)
T ss_dssp TSCEEEE-----ECGGGHHHHHHHHHHHHHHTTS
T ss_pred CceEEEE-----cCcCHHHHHHHHHHHHHHHCCC
Confidence 1222221 3446688888888999998774
No 120
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=68.73 E-value=5.3 Score=38.02 Aligned_cols=77 Identities=10% Similarity=-0.060 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcc-cccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~-v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|+++||+++|++++|||+|.. ++.++...+.-...+...++-...++ ... -....++|+..|..+...+
T Consensus 101 La~~Aa~~aL~~ag~~~~~Id~li~-~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v~~aC~s~~~al~~A~~~i 174 (387)
T 3a5r_A 101 LGKEAALKAIKEWGQPKSKITHLIV-CCLAGVDMPGADYQLTKLLDLDPSVKRFMF-----YHLGCYAGGTVLRLAKDIA 174 (387)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEE-EESSCCEESCHHHHHHHHTTCCTTCEEEEE-----ESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCcHHHHHHHHcCcCCCcceeee-----EccccHHHHHHHHHHHHHH
Confidence 3467899999999999999998764 33332211122334455555432221 111 1234566777777787888
Q ss_pred HcCC
Q 013946 378 RTGW 381 (433)
Q Consensus 378 ~~~~ 381 (433)
+.|.
T Consensus 175 ~~g~ 178 (387)
T 3a5r_A 175 ENNK 178 (387)
T ss_dssp HHST
T ss_pred HhCC
Confidence 7764
No 121
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=68.33 E-value=9.6 Score=35.35 Aligned_cols=78 Identities=18% Similarity=0.122 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+++++||+++|++++|||.|.. ++.++.. .+.-...+...++-.. .+...+ ....++|+..+..+..
T Consensus 61 ~~la~~Aa~~al~~ag~~~~~id~vi~-gt~~~~~~~p~~a~~v~~~lgl~~-~~~~~v-----~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 61 QVMGVAASRRALEHAGVDPAEIDLVVV-STMTNFVHTPPLSVAIAHELGADN-AGGFDL-----SAACAGFCHALSIAAD 133 (339)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCCCCSSCHHHHHHHHHTCTT-CEEEEE-----ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCChHHHHHHHHhCCCC-ccEEEc-----cccchHHHHHHHHHHH
Confidence 345678899999999999999997653 3433211 1112334445555331 222222 2346777888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 134 ~i~~G~ 139 (339)
T 1mzj_A 134 AVESGG 139 (339)
T ss_dssp HHHHSS
T ss_pred HHHCCC
Confidence 888874
No 122
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=67.88 E-value=9.7 Score=37.04 Aligned_cols=79 Identities=9% Similarity=0.078 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcC--CCCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~--~~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
.-...|+++||+++|++++|||.|.. +|.++.. -+.-..-+...++. ...++...+ ....++|+..|..+.
T Consensus 54 ~La~~Aa~~aL~~agi~~~~Id~li~-~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v-----~~aC~gg~~AL~~A~ 127 (450)
T 2f82_A 54 SMSFNAVTSLLEKYKIDPKQIGRLEV-GSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDS-----TNACYGGTAALLNCV 127 (450)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEE-ECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEE-----CSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCHHHCCEEEE-EecCCCCCCCcHHHHHHHHhCCcCCCCceEEEh-----hhhhHHHHHHHHHHH
Confidence 34568899999999999999999884 4444321 11223334444443 112222222 234566777788888
Q ss_pred HHHHcCCc
Q 013946 375 QAIRTGWI 382 (433)
Q Consensus 375 ~~l~~~~i 382 (433)
..++.|..
T Consensus 128 ~~I~sg~~ 135 (450)
T 2f82_A 128 NWVESNSW 135 (450)
T ss_dssp HHHHSTTC
T ss_pred HHHHcCCC
Confidence 88887653
No 123
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=67.55 E-value=10 Score=34.95 Aligned_cols=78 Identities=18% Similarity=0.117 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC-CCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTP-AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~-~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+++++||+++|++++|||.|.. ++.++ ...+.-...+...++-. ..+...+ ....++++..+..+..
T Consensus 62 ~~la~~A~~~al~~ag~~~~~id~vi~-~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v-----~~aC~s~~~al~~A~~ 134 (335)
T 1u6e_A 62 ASMATEACRRALSNAGLSAADIDGVIV-TTNTHFLQTPPAAPMVAASLGAK-GILGFDL-----SAGAAGFGYALGAAAD 134 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEE-ECSCCCCSSSCHHHHHHHHHTCT-TSEEEEE-----ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCChHHHHHHHHhCCC-CCcEeee-----ccccHHHHHHHHHHHH
Confidence 345678999999999999999998764 44432 11112233444555532 2222222 2346777888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 135 ~i~~g~ 140 (335)
T 1u6e_A 135 MIRGGG 140 (335)
T ss_dssp HHHHTS
T ss_pred HHHcCC
Confidence 888874
No 124
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=67.27 E-value=6.8 Score=38.35 Aligned_cols=75 Identities=11% Similarity=0.070 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
-..+|+++||+++|++++|||+|.+ +|.|...-+.-...+...+|-...... -.+.+...++|+..|..+...++
T Consensus 113 La~~Aa~~AL~~agi~~~dId~li~-~t~t~~~~P~~a~~v~~~LGl~~~~~~----~dv~~~~Csgg~~AL~~A~~~i~ 187 (465)
T 3e1h_A 113 LAVEASRKAMAEARLVPAQITHMVS-TTCTDSANPGYDHYVAKELGLSDRLEK----VLLHGIGCSGGLAALRTAANLCL 187 (465)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEE-ECSSCCCSSCHHHHHHHHHTCCTTCEE----EEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EeeCCCCCCcHHHHHHHHhCCCCCeeE----EEecCCcchHHHHHHHHHHHHHh
Confidence 3457899999999999999999865 333322222333445555554321100 11122344555666666666665
No 125
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=66.52 E-value=18 Score=33.81 Aligned_cols=78 Identities=10% Similarity=-0.130 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCC--CCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATS--TPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~g--t~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
.-..+|+++||+++|++++|||+|..--+. ++..-.. ...+...++-. ..+...+ ....++|+..|..+..
T Consensus 56 ~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~-a~~v~~~lG~~-~~~~~~v-----~~aC~~~~~al~~A~~ 128 (357)
T 3s3l_A 56 RMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPA-ASYVAHEAVGR-HVPAFGL-----AQRCNGGMGAIELAGA 128 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCH-HHHHHHHHTCS-SSCEEEE-----ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccH-HHHHHHHhCCC-CCcEEEE-----cCccHHHHHHHHHHHH
Confidence 445789999999999999999998653221 2211111 33344455532 2232222 2345566777777777
Q ss_pred HHHcCCc
Q 013946 376 AIRTGWI 382 (433)
Q Consensus 376 ~l~~~~i 382 (433)
.++.|..
T Consensus 129 ~i~sg~~ 135 (357)
T 3s3l_A 129 YLGSGIG 135 (357)
T ss_dssp HHHTTSS
T ss_pred HHHcCCC
Confidence 8877654
No 126
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=65.01 E-value=10 Score=34.70 Aligned_cols=77 Identities=14% Similarity=0.006 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..+++++||+++|++++|||.|.. ++.++.. .+.-...+...++- ..+...+ ....++|+..+..+..
T Consensus 51 ~~la~~a~~~al~~ag~~~~~id~vi~-~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v-----~~aCas~~~al~~A~~ 122 (322)
T 1ub7_A 51 SDLAFKAVEDLLRRHPGALEGVDAVIV-ATNTPDALFPDTAALVQARFGL--KAFAYDL-----LAGCPGWIYALAQAHA 122 (322)
T ss_dssp HHHHHHHHHHHHHHSTTTTTTEEEEEE-ECSSCSEEESCHHHHHHHHTTC--CCEEEEE-----ECSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCC--CCEEEee-----CccchHHHHHHHHHHH
Confidence 345568899999999999999997653 4443311 11123334444543 1222222 2346778888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 123 ~i~~g~ 128 (322)
T 1ub7_A 123 LVEAGL 128 (322)
T ss_dssp HHHTTS
T ss_pred HHHcCC
Confidence 898874
No 127
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=60.09 E-value=11 Score=36.91 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCC--CCcccccchhhhhhHhhhHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVV 374 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~--~~~~v~s~k~~~Gh~~~asG~~~l~~~~ 374 (433)
.-..+|.++||+++|++++|||++.. +|.|+. ..+.-...+.+.++.. ..++... + ....++|+..|..+.
T Consensus 75 ~La~~Aa~~aL~~agi~~~dId~li~-~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~d----v-~~aC~gg~~AL~~A~ 148 (478)
T 2p8u_A 75 SLCMTVVQNLMERNNLSYDCIGRLEV-GTETIIDKSKSVKTNLMQLFEESGNTDIEGID----T-TNACYGGTAAVFNAV 148 (478)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEE-ECSCCSCSSSCHHHHHGGGTTTTTCCCCBCCE----E-ESGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EccCCcccCccHHHHHHHHHhhcCCCCceEEE----E-cchhHHHHHHHHHHH
Confidence 44578999999999999999999884 444432 1122223333333321 1222211 2 233455666666677
Q ss_pred HHHHcCC
Q 013946 375 QAIRTGW 381 (433)
Q Consensus 375 ~~l~~~~ 381 (433)
..++.|.
T Consensus 149 ~~i~sg~ 155 (478)
T 2p8u_A 149 NWIESSS 155 (478)
T ss_dssp HHHTSTT
T ss_pred HHHHcCC
Confidence 7776653
No 128
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=56.33 E-value=13 Score=36.23 Aligned_cols=80 Identities=8% Similarity=0.091 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHH
Q 013946 298 VGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 376 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~ 376 (433)
.-..+|.++||+++|++++|||+|.. +|.|+.. .+.-..-+...+|-.....+.+.. + ....++|+..|..+...
T Consensus 56 ~La~~Aa~~AL~~agi~~~dId~Iiv-aT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~D--v-~~ACsGg~~AL~~A~~~ 131 (460)
T 2v4w_A 56 SLCLTVVQRLMERIQLPWDSVGRLEV-GTETIIDKSKAVKTVLMELFQDSGNTDIEGID--T-TNACYGGTASLFNAANW 131 (460)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEE-ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCE--E-ESGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCCCCCcHHHHHHHHhCCCCCCCcEEEE--e-cchhHHHHHHHHHHHHH
Confidence 34568899999999999999999864 5655421 112223344444421000111111 1 12234455666667777
Q ss_pred HHcCC
Q 013946 377 IRTGW 381 (433)
Q Consensus 377 l~~~~ 381 (433)
++.|.
T Consensus 132 I~sg~ 136 (460)
T 2v4w_A 132 MESSS 136 (460)
T ss_dssp HTSTT
T ss_pred HHhCC
Confidence 77654
No 129
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=51.13 E-value=37 Score=32.36 Aligned_cols=25 Identities=28% Similarity=0.185 Sum_probs=20.4
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 295 PDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 295 ~~~~~~~~ai~~al~~agl~~~dId 319 (433)
|...-..++.++||++||++++|||
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id 97 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSN 97 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcC
Confidence 3334556789999999999999998
No 130
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=49.26 E-value=16 Score=35.59 Aligned_cols=30 Identities=10% Similarity=0.188 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCC
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTP 329 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~ 329 (433)
-...|.+++|+++|++|+|||+|.+ +|-|+
T Consensus 57 ma~~Aa~~al~~a~i~~~~Id~ii~-aT~t~ 86 (460)
T 2wya_A 57 LCLTVVQRLMERIQLPWDSVGRLEV-GTETI 86 (460)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEE-ECSCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EeCCC
Confidence 4567899999999999999998875 44443
No 131
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=48.55 E-value=19 Score=38.76 Aligned_cols=76 Identities=16% Similarity=0.008 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHcCCCCc-ccccchhhhhhHhhhHHHHHHHHHHHHHH
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGL-RVNSTKSMIGHLLGAAGAVEAIAVVQAIR 378 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~~~~~~-~v~s~k~~~Gh~~~asG~~~l~~~~~~l~ 378 (433)
..+|.++||+++|++++|||.|... |.+...-+.-...+...+|-.... +... -....++|+..|..+...++
T Consensus 693 a~~Aa~~AL~~agl~~~dId~ii~~-t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-----v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 693 GKEAALKALKEWGQPKSKITHLVFC-TTSGVEMPGADYKLANLLGLEPSVRRVML-----YHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEEE-ESSCCCSSCHHHHHHHHHTCCTTCEEEEE-----ESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEE-eeCCCCCCcHHHHHHHHcCCCcccEEEee-----eccccHhHHHHHHHHHHHHH
Confidence 3568999999999999999997653 222222223344455666643211 1111 13346677778888888888
Q ss_pred cCC
Q 013946 379 TGW 381 (433)
Q Consensus 379 ~~~ 381 (433)
.|.
T Consensus 767 sG~ 769 (979)
T 3tsy_A 767 NNA 769 (979)
T ss_dssp TST
T ss_pred hCC
Confidence 774
No 132
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=45.15 E-value=29 Score=33.26 Aligned_cols=25 Identities=20% Similarity=0.032 Sum_probs=20.1
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 295 PDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 295 ~~~~~~~~ai~~al~~agl~~~dId 319 (433)
|...-..++.++||++||++++||+
T Consensus 87 ~~~~l~l~aa~~AL~dAGl~~~~i~ 111 (427)
T 3ho9_A 87 AFIQYGIVAGVQAMQDSGLEITEEN 111 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHHHHCCCCccccc
Confidence 3334456789999999999999987
No 133
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=42.29 E-value=23 Score=32.69 Aligned_cols=30 Identities=27% Similarity=0.341 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEe-ccCCC
Q 013946 299 GVILCIEKALAHSGVSREDVNYINA-HATST 328 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~-h~~gt 328 (433)
.+..+++++|+++|++++|||.|-. -|.|.
T Consensus 50 ~l~~~i~~~L~~agi~~~did~Ia~~~GPG~ 80 (330)
T 2ivn_A 50 LMKPLLRKALSEAGVSLDDIDVIAFSQGPGL 80 (330)
T ss_dssp HHHHHHHHHHHHHTCCTTTCCEEEEEEESSC
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCCCc
Confidence 3456899999999999999999864 45554
No 134
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=38.59 E-value=21 Score=33.51 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
..+++++.++++++++++||.|-+||
T Consensus 70 ~a~av~~~l~~~~~~~~~Id~IGsHG 95 (371)
T 3qbx_A 70 AAQGVRELLLQQQMSPDEVRAIGSHG 95 (371)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECC
T ss_pred HHHHHHHHHHHcCCCcccccEEEeCC
Confidence 45789999999999999999999997
No 135
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=36.93 E-value=9.1 Score=38.04 Aligned_cols=99 Identities=11% Similarity=-0.004 Sum_probs=49.0
Q ss_pred EEEEeeeccCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEE----eccCCCCCCC---HH-----HHHHHHHH
Q 013946 277 EFRGGSFTSDAYHMT--EPHPDGVGVILCIEKALAHSGVSREDVNYIN----AHATSTPAGD---IK-----EYQALIHC 342 (433)
Q Consensus 277 ~i~g~~~~~d~~~~~--~~~~~~~~~~~ai~~al~~agl~~~dId~v~----~h~~gt~~~D---~~-----E~~al~~~ 342 (433)
+|.|++......... ......+-...++++||+++||+++|||-+. .-.+++..+- .. -...+...
T Consensus 21 VIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~ 100 (520)
T 4egv_A 21 VIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARN 100 (520)
T ss_dssp EEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHH
T ss_pred EEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHH
Confidence 477877653322111 1111123456899999999999999987431 1111110000 00 01112222
Q ss_pred HcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHHHcCC
Q 013946 343 FGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 343 ~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l~~~~ 381 (433)
++-. +.+.... ...++||+..+..++.+++.|.
T Consensus 101 lGl~-~~~~~~~-----~~~caSg~~av~~AA~aI~aG~ 133 (520)
T 4egv_A 101 IGAD-PAHAVLE-----VIGGQSPQHLATEFGGKIAAGE 133 (520)
T ss_dssp HTCC-CSEEEEC-----CSSTTHHHHHHHHHHHHHHTTS
T ss_pred cCCC-CceEEEe-----cCCCHHHHHHHHHHHHHHHcCC
Confidence 3322 1222111 2347888888888999998874
No 136
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=36.67 E-value=1.2e+02 Score=28.97 Aligned_cols=26 Identities=8% Similarity=0.024 Sum_probs=21.1
Q ss_pred CCChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 294 HPDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 294 ~~~~~~~~~ai~~al~~agl~~~dId 319 (433)
+|...-..++.++||++||+++++|+
T Consensus 96 d~~~~l~l~aa~~AL~dAGl~~~~i~ 121 (437)
T 2gqd_A 96 DRFTQYAIVAAREAVKDAQLDINENT 121 (437)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccC
Confidence 44445566889999999999999988
No 137
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=34.66 E-value=1.4e+02 Score=28.50 Aligned_cols=25 Identities=24% Similarity=0.232 Sum_probs=19.8
Q ss_pred CChHHHHHHHHHHHHHcCCCCCC-cc
Q 013946 295 PDGVGVILCIEKALAHSGVSRED-VN 319 (433)
Q Consensus 295 ~~~~~~~~ai~~al~~agl~~~d-Id 319 (433)
|...-..++.++||++||++++| ||
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id 111 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDED 111 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhcc
Confidence 33445568899999999999998 65
No 138
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=33.77 E-value=24 Score=32.73 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEec-cCCC
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAH-ATST 328 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h-~~gt 328 (433)
.+..+++++|+++|++++|||.|-.. |.|.
T Consensus 55 ~l~~~i~~~L~~ag~~~~did~Iav~~gPG~ 85 (334)
T 3eno_A 55 VIDTVISRALEKAKISIHDIDLIGFSMGPGL 85 (334)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEECSSSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCC
Confidence 45678999999999999999998643 3443
No 139
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=33.75 E-value=1.4e+02 Score=28.34 Aligned_cols=22 Identities=9% Similarity=0.143 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcc
Q 013946 298 VGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 298 ~~~~~ai~~al~~agl~~~dId 319 (433)
.-..++.++||++||+++++||
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~ 100 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELN 100 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTT
T ss_pred HHHHHHHHHHHHHcCCChhhcC
Confidence 4456789999999999999998
No 140
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=32.60 E-value=23 Score=33.28 Aligned_cols=26 Identities=19% Similarity=0.478 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecc
Q 013946 300 VILCIEKALAHSGVSREDVNYINAHA 325 (433)
Q Consensus 300 ~~~ai~~al~~agl~~~dId~v~~h~ 325 (433)
..+++++.++++++++++||.|-+||
T Consensus 74 ~a~av~~~l~~~~~~~~~i~~IGsHG 99 (370)
T 3cqy_A 74 FALAVNNLLAKTKIAKDEIIAIGSHG 99 (370)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcccccEEEeCC
Confidence 45789999999999999999999997
No 141
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=32.22 E-value=19 Score=36.11 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=21.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec
Q 013946 301 ILCIEKALAHSGVSREDVNYINAH 324 (433)
Q Consensus 301 ~~ai~~al~~agl~~~dId~v~~h 324 (433)
..+|+.+|++|||+++|||+|-..
T Consensus 53 ~~AI~~cL~~AGi~~~DID~Va~~ 76 (576)
T 3ven_A 53 VQAAAFCLAQAGLTVDDLDAVAFG 76 (576)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEES
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEE
Confidence 468999999999999999999853
No 142
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=31.64 E-value=55 Score=28.40 Aligned_cols=65 Identities=11% Similarity=0.113 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEe-ccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHh
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLL 362 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~-h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~ 362 (433)
.+.+...++++|+++|++++|||.|-. -|.|.-.+=++-... .+.+.....+|+..+...-+|..
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~-ak~la~~~~~Pl~~V~~l~a~a~ 100 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGI-AQGLALGANLPMIGVSTLATMAQ 100 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHH-HHHHHHTTTCCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHH-HHHHHHHcCCCEEEeccHHHHHH
Confidence 455788999999999999999998765 566554332222211 22222122366666666555554
No 143
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=31.38 E-value=1.1e+02 Score=28.82 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=20.6
Q ss_pred CCChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 294 HPDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 294 ~~~~~~~~~ai~~al~~agl~~~dId 319 (433)
++...-..+++++||++||+++++||
T Consensus 77 d~~~~l~l~aa~~AL~dAGl~~~~id 102 (415)
T 1tqy_B 77 DPSTRLALTAADWALQDAKADPESLT 102 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGSC
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccC
Confidence 33344567889999999999998887
No 144
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=29.97 E-value=1.4e+02 Score=28.37 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=20.9
Q ss_pred CCChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 294 HPDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 294 ~~~~~~~~~ai~~al~~agl~~~dId 319 (433)
+|...-..++.++||++||+++++||
T Consensus 91 d~~~~l~l~aa~~AL~dAG~~~~~i~ 116 (430)
T 1ox0_A 91 DNYSLYALYAAQEAVNHANLDVEALN 116 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCTTTSC
T ss_pred CHHHHHHHHHHHHHHHHcCCChhhcC
Confidence 33344567889999999999999987
No 145
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=29.47 E-value=67 Score=29.33 Aligned_cols=76 Identities=20% Similarity=0.056 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHH
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 375 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~ 375 (433)
..-..++.++||+++|+ +|||.|.. ++.++.. .+.-...+...++-.. .+...+ ....++|+..+..+..
T Consensus 54 ~~la~~Aa~~al~~ag~--~~id~vi~-~t~~~~~~~p~~a~~v~~~lgl~~-~~~~~v-----~~aCas~~~Al~~A~~ 124 (331)
T 2x3e_A 54 GDLALRAASAALASAGL--ERVDAVVL-ATSTGDFCCPATAPRVAARLGLVG-ALAFDL-----SAAATGFVYGLASVGS 124 (331)
T ss_dssp HHHHHHHHHHHHHHHTC--SCCSEEEE-ECSSCSEEESCSHHHHHHHTTCTT-SEEEEE-----ECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc--ccCCEEEE-EeCCCCCCCChHHHHHHHHhCCCC-CcEEEE-----cCcChHHHHHHHHHHH
Confidence 34567899999999999 89998663 3433211 0111233444454321 222221 2346677888888888
Q ss_pred HHHcCC
Q 013946 376 AIRTGW 381 (433)
Q Consensus 376 ~l~~~~ 381 (433)
.++.|.
T Consensus 125 ~i~~g~ 130 (331)
T 2x3e_A 125 LISAGL 130 (331)
T ss_dssp HHHTTS
T ss_pred HHHcCC
Confidence 888874
No 146
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=29.18 E-value=90 Score=30.02 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCc
Q 013946 297 GVGVILCIEKALAHSGVSREDV 318 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dI 318 (433)
..-..++.++||++||++++||
T Consensus 103 ~~L~l~Aa~~AL~dAGl~~~~i 124 (451)
T 4ddo_A 103 IQMAMVAADEALAEAGWAPEAE 124 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSH
T ss_pred HHHHHHHHHHHHHHcCCChhhc
Confidence 3445678999999999999998
No 147
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=28.31 E-value=1.2e+02 Score=28.61 Aligned_cols=25 Identities=20% Similarity=0.250 Sum_probs=20.1
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 295 PDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 295 ~~~~~~~~ai~~al~~agl~~~dId 319 (433)
+...-..++.++||++||+++++||
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id 94 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLD 94 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSC
T ss_pred HHHHHHHHHHHHHHHHcCCCccccC
Confidence 3334456789999999999999987
No 148
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=26.35 E-value=1e+02 Score=26.60 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchH
Q 013946 94 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 134 (433)
Q Consensus 94 ~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~ 134 (433)
.....+..++|+++|++++++| +|.++...|.+.
T Consensus 36 ~~l~~~i~~~L~~a~~~~~did-------~Iav~~GPGsft 69 (231)
T 2gel_A 36 QRILPMVQEILAASGASLNEID-------ALAFGRGPGSFT 69 (231)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCS-------EEEEECCSSCHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCChhH
Confidence 3456788999999999999888 888887766553
No 149
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=25.60 E-value=90 Score=29.70 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcc
Q 013946 297 GVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId 319 (433)
..-..++.++||++||+++++||
T Consensus 74 ~~l~l~aa~~AL~dAG~~~~~i~ 96 (424)
T 1tqy_A 74 SQFAVACAREAFAASGLDPDTLD 96 (424)
T ss_dssp HHHHHHHHHHHHHHHTCCTTTCC
T ss_pred HHHHHHHHHHHHHHCCCCchhcC
Confidence 34456789999999999999997
No 150
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=25.03 E-value=1.4e+02 Score=28.60 Aligned_cols=22 Identities=18% Similarity=0.027 Sum_probs=18.4
Q ss_pred hHhhhHHHHHHHHHHHHHHcCC
Q 013946 360 HLLGAAGAVEAIAVVQAIRTGW 381 (433)
Q Consensus 360 h~~~asG~~~l~~~~~~l~~~~ 381 (433)
.+..+||+..+..++.+|+.|.
T Consensus 185 ~taCsS~l~Al~~A~~~I~~G~ 206 (438)
T 2iwz_A 185 STACTTGAHAVGDSFRFIAHGD 206 (438)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTS
T ss_pred cCchhHHHHHHHHHHHHHHcCC
Confidence 4467888999999999999885
No 151
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=23.24 E-value=90 Score=29.79 Aligned_cols=25 Identities=20% Similarity=0.399 Sum_probs=20.0
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcc
Q 013946 295 PDGVGVILCIEKALAHSGVSREDVN 319 (433)
Q Consensus 295 ~~~~~~~~ai~~al~~agl~~~dId 319 (433)
+..+-...++++||++||+++++|+
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~ 115 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVS 115 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcc
Confidence 3344556889999999999988887
No 152
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=22.66 E-value=1.1e+02 Score=26.17 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCCCcccccccCCCeeEEEEeccCCchH
Q 013946 94 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 134 (433)
Q Consensus 94 ~l~l~aa~~Al~dAgl~~~~~~~~~~~~~gv~~g~~~g~~~ 134 (433)
+..+....++|+++|++++++| +|.++...|.+.
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld-------~Iav~~GPGsfT 70 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLD-------ALAFGRGPGSFT 70 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCS-------EEEEEEESSCHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcc-------EEEEecCCCchh
Confidence 3445678999999999998887 777777666554
No 153
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=20.90 E-value=1.6e+02 Score=23.30 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=38.4
Q ss_pred EEEEEeeeccCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCCCCHHHHHHHHHHHc
Q 013946 276 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFG 344 (433)
Q Consensus 276 a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~D~~E~~al~~~~~ 344 (433)
..+.|.+...+ .+...+..+++++|+++|+.+.+|..+-+-.. -.|..-+..+.+.++
T Consensus 11 ~lvvGIGcrrg--------~~~~~i~~ai~~aL~~~~l~~~~v~~latid~---K~dE~gL~~~A~~lg 68 (145)
T 2w6k_A 11 LLIAGIGCRRG--------CSAEHLRALLERTLGEHGRSLAELDALASIDG---KRDEPGLRQLATLLE 68 (145)
T ss_dssp CEEEEEEECTT--------CCHHHHHHHHHHHHHHTTCCGGGCCEEEEECS---SSCCHHHHHHHHHHT
T ss_pred eEEEEEeeCCC--------CCHHHHHHHHHHHHHHcCCCHHHcceEechHH---hCCCHHHHHHHHHhC
Confidence 35677776532 23567899999999999999999998875422 223233444444554
No 154
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=20.73 E-value=36 Score=32.19 Aligned_cols=74 Identities=9% Similarity=-0.006 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCCC-CHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPAG-DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~~-D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|.++||++++ ++|||.|.. +|.|+.. .+.-...+...++-...++...+ ....++|+..|..+...+
T Consensus 59 La~~Aa~~aL~~a~--~~~Id~li~-~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv-----~~aC~gg~~AL~~A~~~i 130 (388)
T 3v4n_A 59 FAANAAEAILTKED--KEAIDMVIV-GTESSIDESKAAAVVLHRLMGIQPFARSFEI-----KEAXYGATAGLQLAKNHV 130 (388)
T ss_dssp HHHHHHHTTCCHHH--HHHEEEEEE-ECSSCSBSSSCHHHHHHHHTTCCSSCEEEEE-----ESGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--cccCCEEEE-EeccCCCcCccHHHHHHHHcCCCCCceEeeh-----hhhhhHHHHHHHHHHHHH
Confidence 45678899999987 899999875 4544422 22334455666664322332222 123455666777777777
Q ss_pred HcC
Q 013946 378 RTG 380 (433)
Q Consensus 378 ~~~ 380 (433)
+.|
T Consensus 131 ~sg 133 (388)
T 3v4n_A 131 ALH 133 (388)
T ss_dssp HHC
T ss_pred hcC
Confidence 765
No 155
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=20.57 E-value=73 Score=27.26 Aligned_cols=65 Identities=9% Similarity=0.115 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEE-eccCCCCCCCHHHHHHHHHHHcCCCCcccccchhhhhhHh
Q 013946 297 GVGVILCIEKALAHSGVSREDVNYIN-AHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLL 362 (433)
Q Consensus 297 ~~~~~~ai~~al~~agl~~~dId~v~-~h~~gt~~~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~ 362 (433)
.+.+...++++|+++|++++|||.|- .-|.|.-.+=++-....+ .+.....+|+-.+...-+|..
T Consensus 36 s~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~Ak-gLa~~~~iPl~gVstL~a~a~ 101 (213)
T 3r6m_A 36 TKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQ-GLAFGAELPMIGVSTLAAMAQ 101 (213)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHH-HHHHHTTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHH-HHHHHhCCCEEEEcCHHHHHH
Confidence 45677899999999999999999865 445665433222221111 111111366666655555543
No 156
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=20.49 E-value=33 Score=32.99 Aligned_cols=74 Identities=9% Similarity=-0.026 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEeccCCCCC-CCHHHHHHHHHHHcCCCCcccccchhhhhhHhhhHHHHHHHHHHHHH
Q 013946 299 GVILCIEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 377 (433)
Q Consensus 299 ~~~~ai~~al~~agl~~~dId~v~~h~~gt~~-~D~~E~~al~~~~~~~~~~~v~s~k~~~Gh~~~asG~~~l~~~~~~l 377 (433)
-..+|.++||+++| ++|||.|.. +|.|+. ..+.-...+...++-...++...++ ...++|+..|..+...+
T Consensus 88 La~~Aa~~aL~~ag--~~dId~li~-~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~-----~aC~gg~~AL~~A~~~i 159 (425)
T 3sqz_A 88 LAAGSANEILTAED--KEKIDMVIL-ATESSVDQSKAGAVYVHSLLGIQPFARSFEMK-----EAAYSATAALNYAKLHV 159 (425)
T ss_dssp HHHHHHHTTCCHHH--HHHEEEEEE-ECSCCSCSSSCHHHHHHHHTTCCSSCEEEEEC-----CC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--hhhCCEEEE-EecccccccchHHHHHHHHhCCCCCeeEEEEc-----CHhHHHHHHHHHHHHHH
Confidence 45678899999988 999999875 455542 2233344556666643223322221 23455666777777777
Q ss_pred HcC
Q 013946 378 RTG 380 (433)
Q Consensus 378 ~~~ 380 (433)
+.|
T Consensus 160 ~sg 162 (425)
T 3sqz_A 160 EKH 162 (425)
T ss_dssp HHS
T ss_pred HcC
Confidence 765
Done!