BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013949
(433 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
vinifera]
Length = 829
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/389 (58%), Positives = 286/389 (73%), Gaps = 24/389 (6%)
Query: 48 EEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVS 107
EE L V KKT+K++ ++ VG P+SV+EA +++P RY ++K K
Sbjct: 9 EEAAPLQPCVVKKTKKSRAAAEASVVGAPISVNEARQKWPQRYISTNKFRKGSDSRTKDE 68
Query: 108 SIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEP 167
SI E E++LQAR H+T+A VDGC+Y L D AYVKAE+G D+IA+IVELFE++D EP
Sbjct: 69 SI----EAEDILQARRHFTEAVVDGCIYKLYDYAYVKAEDGQPDFIAKIVELFETIDREP 124
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQ 227
YF A+WF+RAEDTVIKD A+LVD+KRVF SD+ DDNPL+CIVSK +I +VA N+DL K+
Sbjct: 125 YFTAQWFFRAEDTVIKDHAHLVDQKRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKE 184
Query: 228 KNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET-------GSNSPIGEPE 280
K IPPCDLYYDM Y+L HLTF+N+ E++R +SD SSTISSE G NS IGE
Sbjct: 185 KTIPPCDLYYDMSYSLKHLTFANLLTENSRTESDESSTISSEIGLNSTTDGINSAIGESS 244
Query: 281 ---------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
M+LLDLYSGCGAMSTGLC+GASLSG+KLVTRWA+DINPHAC+SLK NHPET
Sbjct: 245 QVHKFQGSGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPET 304
Query: 332 KVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMS--EDEEEEEEEENDDDSNV 389
+VRNEAA+DFLSLLKEWA LC+ FS+ + + PE +N +S ++EE+ + DD S V
Sbjct: 305 EVRNEAAEDFLSLLKEWATLCEDFSLLGSRR-PE-VVNPISNRSGSDDEEDADGDDGSPV 362
Query: 390 PNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
P EFEV+ L A+CYGDPN+ KPG+YFK
Sbjct: 363 PRGEFEVKKLVAICYGDPNEINKPGLYFK 391
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/390 (57%), Positives = 285/390 (73%), Gaps = 28/390 (7%)
Query: 48 EEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYS-SKGHKKKKVAAGV 106
EE L V KKT+K++ ++ VG P+SV+EA +++P RY + KG + +
Sbjct: 9 EEAAPLQPCVVKKTKKSRAAAEASVVGAPISVNEARQKWPQRYISTFRKGSDSRTKDESI 68
Query: 107 SSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGE 166
E E++LQAR H+T+A VDGC+Y L D AYVKAE+G D+IA+IVELFE++D E
Sbjct: 69 -------EAEDILQARRHFTEAVVDGCIYKLYDYAYVKAEDGQPDFIAKIVELFETIDRE 121
Query: 167 PYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAK 226
PYF A+WF+RAEDTVIKD A+LVD+KRVF SD+ DDNPL+CIVSK +I +VA N+DL K
Sbjct: 122 PYFTAQWFFRAEDTVIKDHAHLVDQKRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEK 181
Query: 227 QKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET-------GSNSPIGEP 279
+K IPPCDLYYDM Y+L HLTF+N+ E++R +SD SSTISSE G NS IGE
Sbjct: 182 EKTIPPCDLYYDMSYSLKHLTFANLLTENSRTESDESSTISSEIGLNSTTDGINSAIGES 241
Query: 280 E---------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
M+LLDLYSGCGAMSTGLC+GASLSG+KLVTRWA+DINPHAC+SLK NHPE
Sbjct: 242 SQVHKFQGSGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPE 301
Query: 331 TKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMS--EDEEEEEEEENDDDSN 388
T+VRNEAA+DFLSLLKEWA LC+ FS+ + + PE +N +S ++EE+ + DD S
Sbjct: 302 TEVRNEAAEDFLSLLKEWATLCEDFSLLGSRR-PE-VVNPISNRSGSDDEEDADGDDGSP 359
Query: 389 VPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
VP EFEV+ L A+CYGDPN+ KPG+YFK
Sbjct: 360 VPRGEFEVKKLVAICYGDPNEINKPGLYFK 389
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/419 (54%), Positives = 287/419 (68%), Gaps = 30/419 (7%)
Query: 25 RKLKLAEQQHQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALK 84
R K ++ + +EE ++ P+ L++ K+T+K K D+DL F+G P+S EA K
Sbjct: 3 RSAKRPNREPEVEEEDGATLSDQKGPITLLSARPKETKKAKLDADLSFIGNPISATEARK 62
Query: 85 RYPDRYKYSSKGHKKKKVAAGV-SSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYV 143
++P RYK + KV G G L+++++V QA+CHY QA VDG LY+LGDDAYV
Sbjct: 63 KWPQRYK-----SQISKVKNGSEPQNGVLSKDDDVTQAKCHYKQAMVDGILYDLGDDAYV 117
Query: 144 KAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDN 203
KAE+G DYIARIVE+FES+DGEP F A+WFYRAEDTVIKD + +RVFLS++ DDN
Sbjct: 118 KAEDGKPDYIARIVEMFESIDGEPLFTAQWFYRAEDTVIKDYVKTAESRRVFLSEIRDDN 177
Query: 204 PLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNIN----------- 252
PL+CIVSK KIA V N+DL K++N+PPCDLYYDMKYTLP LT+ I
Sbjct: 178 PLDCIVSKVKIALVEPNLDLAEKERNLPPCDLYYDMKYTLPFLTYETIKTDDSGRDSGSS 237
Query: 253 ------NESNRRDSDASSTISSETGSNSPIGEPEMS---LLDLYSGCGAMSTGLCIGASL 303
N+SN D T + S + E S LLDLYSGCGAMSTGLC+GASL
Sbjct: 238 STISSENDSNNSIDDVKVTTAKPLKVLSKVHSSEKSELYLLDLYSGCGAMSTGLCMGASL 297
Query: 304 SGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKV 363
SGVKLVT+WA+DIN ACKSLK NHPET+VRNEAA+DFLSLLKEW KLC+ FS++ ++K
Sbjct: 298 SGVKLVTKWAVDINAFACKSLKTNHPETEVRNEAAEDFLSLLKEWEKLCRKFSLFGSEKH 357
Query: 364 PEQSLNFMSEDEEEEEEEENDDDSNVPNEE----FEVESLTAVCYGDPNKTKKPGVYFK 418
PEQS N S++EEE+EEEE ++ +++ FEVE L AVCYGDPNK K G+YFK
Sbjct: 358 PEQSSNSASDEEEEDEEEEEEEKGKDKDDDDDEIFEVEKLLAVCYGDPNKVNKRGLYFK 416
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/391 (53%), Positives = 271/391 (69%), Gaps = 28/391 (7%)
Query: 45 EVKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAA 104
+ +++ V L+ + K + +S+ F G P+ EAL ++P RY S+G KK +
Sbjct: 11 DAQDDTVSLLPSQRNKAKHPNSNSNACFAGKPIPPAEALAKWPHRY--PSEGKKK---GS 65
Query: 105 GVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVD 164
+S A +E EV+ ARCHY QA VDG +YNL DDAYVKAE+G DYIARIVE+FE+VD
Sbjct: 66 ARTSKEATSENSEVMPARCHYRQAKVDGVVYNLYDDAYVKAEDGKPDYIARIVEMFETVD 125
Query: 165 GEPYFKARWFYRAEDTV---IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANM 221
E F A+WFYRAEDTV IK+ LVD+KR+F+SDV+D NPL+CIVSK KI + + ++
Sbjct: 126 KEQCFTAQWFYRAEDTVMQVIKNHGDLVDKKRIFISDVKDVNPLDCIVSKVKIYKKSPSV 185
Query: 222 DLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDA-----------SSTISSET 270
DL +K+ +P CD YYDMKYT+P+LTFSNI NES+ + + ++ + +T
Sbjct: 186 DLTSKKGKLPSCDYYYDMKYTVPYLTFSNIVNESDASSTISSESGSNGCVSNANLANGKT 245
Query: 271 GSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
N+ G E +LLDLYSGCGAMSTGLC GASL+G+KLVTRWA+DIN HAC+SLK NHPE
Sbjct: 246 TQNNSSGSSEWTLLDLYSGCGAMSTGLCFGASLAGIKLVTRWAVDINAHACESLKLNHPE 305
Query: 331 TKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEE---EEEEENDDDS 387
T+VRNE A+DFL+L+K WAKLC+ F++ ++++ S M EDE E +EE N DS
Sbjct: 306 TQVRNEPAEDFLNLIKSWAKLCEEFALLGSERL--DSDPDMDEDENEAVRKEESGNQSDS 363
Query: 388 NVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
EEFEVE L AVCYGDPN KKPG+YFK
Sbjct: 364 ----EEFEVEKLLAVCYGDPNDVKKPGLYFK 390
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/395 (52%), Positives = 269/395 (68%), Gaps = 31/395 (7%)
Query: 44 EEVKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVA 103
++ + + V L+ +KK + + P+ D FVG P+ EA ++P RY + KK A
Sbjct: 12 DDAQNDTVSLLPSQRKKPKHSAPNPDACFVGKPIPSAEARAKWPHRYP-----SEVKKKA 66
Query: 104 AGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESV 163
SS +E EV+ ARCHY QA VDG +YNL DDAYVKAE+G DYIARIVE+FE+V
Sbjct: 67 PARSSEEVTSENSEVMLARCHYRQAKVDGVVYNLYDDAYVKAEDGKPDYIARIVEMFETV 126
Query: 164 DGEPYFKARWFYRAEDTV---IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAAN 220
D E F A+WFYRAEDTV IK+ LVD+KRVF+SDV+D NPL+CIVSK KI + +
Sbjct: 127 DKEQCFMAQWFYRAEDTVMQVIKNHGDLVDKKRVFISDVKDVNPLDCIVSKVKIFKKNPS 186
Query: 221 MDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDA----------------SS 264
+DL +K+ +P CD YYDMKYT+P+LTFSN+ N N DSDA ++
Sbjct: 187 VDLASKKAKLPFCDYYYDMKYTVPYLTFSNLVNGKN--DSDASSTISSESGSIGCVNNAN 244
Query: 265 TISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSL 324
+T N+ G + +LLDLYSGCGAMSTGLC+GASL+G+KLVT WA+DIN HACKSL
Sbjct: 245 LAKRKTTQNNSSGSSQWTLLDLYSGCGAMSTGLCLGASLAGIKLVTMWAVDINAHACKSL 304
Query: 325 KFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEE-EEEEN 383
K NHPET VRNE A+DFL+L+K WAKLC+ F++ +++ S M EDE E ++EE+
Sbjct: 305 KLNHPETHVRNEPAEDFLNLIKAWAKLCEEFALLGSER--SDSDPDMDEDENEAVQKEES 362
Query: 384 DDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
+ S++ EEFEVE L AVCYGDPN KKPG+YFK
Sbjct: 363 GNQSDL--EEFEVEKLLAVCYGDPNGVKKPGLYFK 395
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
max]
Length = 868
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/394 (52%), Positives = 266/394 (67%), Gaps = 27/394 (6%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAG 105
VKEE T V + ++ FVG PV +EA +R+P RY+ K+KK +AG
Sbjct: 50 VKEEAQASFTDVTDGNVSDGEGTNARFVGEPVPDEEARRRWPKRYQ-----EKEKKQSAG 104
Query: 106 VSSIGALNEEEEVLQARCHYTQASVDGC-LYNLGDDAYVKAEEGAVDYIARIVELFESVD 164
S +E+EE+ QAR HYTQA VDGC LY L DDA+VKAEEG +YI +IVE+FE++D
Sbjct: 105 PKS-NRNDEDEEIQQARRHYTQAEVDGCMLYKLYDDAHVKAEEGEDNYICKIVEIFEAID 163
Query: 165 GEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE 224
G YF A+W+YRA+DTVIK LAYL++ KRVF S+V+DDNPL+C+V K IA + N+DLE
Sbjct: 164 GALYFTAQWYYRAKDTVIKKLAYLIEPKRVFFSEVQDDNPLDCLVEKLNIARITLNVDLE 223
Query: 225 AKQKNIPPCDLYYDMKYTLPHLTFSNI---NNESNRRDSDASSTISSETGS---NSPIGE 278
AK++ IPPCD Y D +Y LP+ TF N+ N ES S S+ ++ G NS E
Sbjct: 224 AKKETIPPCDYYCDTQYLLPYSTFVNLPSENGESGSETSSTISSETNGIGKYEVNSQPKE 283
Query: 279 ---------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 329
PEM LLDLY GCGAMSTGLC+G +LSGV LVTRWA+D+N HAC+ LK NHP
Sbjct: 284 AFLPEESKDPEMKLLDLYCGCGAMSTGLCLGGNLSGVNLVTRWAVDLNQHACECLKLNHP 343
Query: 330 ETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEE-----EEEEEEND 384
ET+VRNE+A++FLSLLKEW +LC YFS+ + E+ +N SED++ EE E+D
Sbjct: 344 ETEVRNESAENFLSLLKEWQELCSYFSLVEKKVSHEKYVNLFSEDDDDTSSNEEVNSEDD 403
Query: 385 DDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
++ N +E FEV + AVCYGDPNK K+ G+YFK
Sbjct: 404 NELNEDDEIFEVSEILAVCYGDPNKKKEQGLYFK 437
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/397 (49%), Positives = 263/397 (66%), Gaps = 36/397 (9%)
Query: 34 HQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSD-LFFVGPPVSVDEALKRYPDRYKY 92
H + ++ + V+EE V L+ +KK++++ +SD FVG P+ DEA K++P RY
Sbjct: 18 HSSKRKKAKQSPVEEELVSLLPSRRKKSKQSSVNSDDACFVGEPIPADEAQKKWPHRYT- 76
Query: 93 SSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDY 152
K +++ G E L+A+ HY +A VDG LY L D+AYVK EEG DY
Sbjct: 77 -----KNDELSEG-----------ESLKAKFHYHEAKVDGILYKLEDNAYVKGEEGKEDY 120
Query: 153 IARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKA 212
IARIVE+FE+ D E YF A+WFYRAEDTVIKD LVD+KR+F+SDV+D+NPL+C+V K
Sbjct: 121 IARIVEMFETPDEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFISDVKDENPLDCLVRKV 180
Query: 213 KIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGS 272
I +++ + AK+K IPPC+ Y+DMKYT+P+LTFSN+ NES + S +
Sbjct: 181 NIVQISPDA---AKKKKIPPCEFYFDMKYTVPYLTFSNVGNESETSTLSSESGYNVHAAD 237
Query: 273 NSPIGE----------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACK 322
+ + E PE +LLDLYSGCGAMSTGLC GAS+SG+KLVTRWA+DIN HAC+
Sbjct: 238 KNAVKEKSSQIKECNRPEWTLLDLYSGCGAMSTGLCFGASISGIKLVTRWAVDINDHACE 297
Query: 323 SLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEE 382
SLK NHPET VRNE +DFLSLLKEWAKLC+ F + + + LN E EE + E
Sbjct: 298 SLKLNHPETHVRNEPTEDFLSLLKEWAKLCEKFVLNGAEST-DSDLNAGEEAGEEADGEA 356
Query: 383 NDDDSNVPNEE-FEVESLTAVCYGDPNKTKKPGVYFK 418
+ N P+ E FEVE L ++CYGDPN+ +KPG+YF+
Sbjct: 357 TN---NSPDSEVFEVERLLSICYGDPNEDEKPGLYFR 390
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 191/364 (52%), Positives = 248/364 (68%), Gaps = 26/364 (7%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
FVG PV DEA KR+P+RY+ + G K+ A SS ++EEEVL+AR HY QA VD
Sbjct: 130 FVGEPVPDDEAKKRWPERYQRKNAG---KRALASASS--KKSDEEEVLKARRHYWQAMVD 184
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAY---- 187
+YNL DDAY+KA +G DYI RIVE FE+ DG+ YF A+WF+RAEDTVIK++A+
Sbjct: 185 NVIYNLNDDAYIKAGDGEPDYIGRIVEFFETTDGQLYFAAQWFFRAEDTVIKEIAHDPKT 244
Query: 188 LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLT 247
+ D +RVFLS+ ++DN L+CIVSK +I V +N+DL+AK+ +IPPCDLYYDM Y+L + T
Sbjct: 245 VHDPRRVFLSEEKNDNVLDCIVSKIRIVRVESNIDLKAKEDSIPPCDLYYDMSYSLSYST 304
Query: 248 FSNINNESNR---------RDSDASSTISSETGSNSPI---GEPE-MSLLDLYSGCGAMS 294
F N+ ES R DAS+ + S+S GE +SLLDLYSGCGAMS
Sbjct: 305 FGNLPPESLRAGSETSSTISSEDASNVCKGKCQSDSEASSSGEKRVLSLLDLYSGCGAMS 364
Query: 295 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 354
TGLC+GA+LSG+KL TRWA+DINP+AC+SLK NHP T+VRNE A+DFL+LL+EW KLC
Sbjct: 365 TGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTEVRNEKAEDFLALLREWEKLCAK 424
Query: 355 FSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPG 414
F++ E S SE ++E+E+ + VP EFEV L +CYGDP+ K G
Sbjct: 425 FNLIGM----ESSFAQGSESSGSDDEDESRISTEVPRGEFEVGKLVGICYGDPSNIGKVG 480
Query: 415 VYFK 418
+ FK
Sbjct: 481 LKFK 484
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 246/382 (64%), Gaps = 40/382 (10%)
Query: 53 LVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGAL 112
L +R KK Q + D FVG P+ DEA K++P RY + +
Sbjct: 42 LPSRRKKAKQSSVNSDDACFVGEPIPADEAQKKWPHRYTKNDE----------------- 84
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 172
+ E+E L+A+ HY +A VDG LY L D+AYVK EEG DYIA IVE+FE+ + E YF A+
Sbjct: 85 SSEDESLKAKFHYREAKVDGILYKLEDNAYVKGEEGKEDYIATIVEMFETPEEEQYFTAQ 144
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
WFYRAEDTVIKD LVD+KR+F SDV+D+NPL+C+V K I +++ + AK+K IPP
Sbjct: 145 WFYRAEDTVIKDHGNLVDKKRIFKSDVKDENPLDCLVRKINIVQISPDA---AKKKKIPP 201
Query: 233 CDLYYDMKYTLPHLTFSNINNE----------------SNRRDSDASSTISSETGSNSPI 276
CD Y+DMKY +P+LTFSNI+N SN R +D T
Sbjct: 202 CDFYFDMKYNVPYLTFSNIDNAHAIIESETSTLSSESGSNVRATDKKGVKEKSTQIKES- 260
Query: 277 GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE 336
PE +LLDLYSGCGAMSTGLC GAS+SG+KLVT+WA+DIN +AC+SLK NHPET VRNE
Sbjct: 261 NRPEWTLLDLYSGCGAMSTGLCFGASISGIKLVTKWAVDINKYACESLKLNHPETYVRNE 320
Query: 337 AADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEV 396
+DFLSLLKEWAKLC F + + + LN E EE+ ++E DD + +E FEV
Sbjct: 321 PTEDFLSLLKEWAKLCDEFVLNGAEST-DSDLNAAEEAEEKADDEAMDDSPD--SEVFEV 377
Query: 397 ESLTAVCYGDPNKTKKPGVYFK 418
E L ++CYGDPN+ +KPG+YFK
Sbjct: 378 ERLLSICYGDPNEDEKPGLYFK 399
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/371 (50%), Positives = 261/371 (70%), Gaps = 22/371 (5%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
+ KK N+ + + F+G PV +EA +R+P RY+ KG KK V S + +
Sbjct: 30 KTKKDVAVNEDEEETKFLGEPVDDEEARRRWPKRYQ--GKGAKK------VISKSSNGDS 81
Query: 116 EEVLQARCHYTQASVDGCL-YNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWF 174
EE++QAR HYTQA VDGC+ +NL DDA+VKAE+G YI +IVE+FE+VDG+ YF A+WF
Sbjct: 82 EEIIQARRHYTQAKVDGCMIFNLYDDAHVKAEDGEDCYICKIVEMFEAVDGDLYFTAQWF 141
Query: 175 YRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCD 234
YRA+DTV+K L +L+D+KRVF S ++DDNPL+C+V+K IA+V DLEAK K IP CD
Sbjct: 142 YRAQDTVLKTLGHLIDKKRVFFSQIQDDNPLDCLVAKLNIAKV----DLEAKNKEIPSCD 197
Query: 235 LYYDMKYTLPHLTFSNINNESNRRDSD-ASSTISSET-----GSNSPIGEPEMSLLDLYS 288
Y DM Y L + +F+N+ E S+ ASSTIS ++ G+NS G + SLLDLYS
Sbjct: 198 YYCDMLYKLEYSSFTNLPPEGKTNASEEASSTISDDSPDTVNGANS--GSEDASLLDLYS 255
Query: 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEW 348
GCGAMSTGLC+GA+++G++LVT+WA+DIN +AC+SL++NHPET VRNE+A+DFL+LLKEW
Sbjct: 256 GCGAMSTGLCLGANMAGLRLVTKWAVDINKYACESLQWNHPETTVRNESAEDFLALLKEW 315
Query: 349 AKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEE-FEVESLTAVCYGDP 407
+LC FS+ ++ + QS N ++ +EEE +D++ + E FEVE A+CYGDP
Sbjct: 316 ERLCASFSLSKSENLERQSFNSSVNEDNVNDEEEEEDENEDGDGEVFEVEKFLAICYGDP 375
Query: 408 NKTKKPGVYFK 418
+ + G+Y K
Sbjct: 376 KEKGERGLYLK 386
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/387 (46%), Positives = 249/387 (64%), Gaps = 34/387 (8%)
Query: 58 KKKTQKNK-PDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEE 116
K+K +K + + D VG + +EA +R+P+RY+ KK A+G S ++ E
Sbjct: 150 KRKMKKEEVEEGDCRLVGEVIPDEEARQRWPERYE----PKKKNTQASGSKSSKDKDDSE 205
Query: 117 EVLQARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
E+++ARCHY QA +DG + NL DDA+VKA + A YI +IVELF ++DG PYF A+WFY
Sbjct: 206 EIVKARCHYRQAEIDGRVIVNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFY 265
Query: 176 RAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDL 235
RA DTVIKD A L+D KRVF S++ DDNPL+C+V K IA V N+DLEA++ I CD
Sbjct: 266 RARDTVIKDHANLIDNKRVFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDY 325
Query: 236 YYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGE----------------P 279
YYDM Y L + +F + E++R +S+A STISSE + E
Sbjct: 326 YYDMLYLLDYSSFIKLPPENSRVNSEALSTISSEANMDGSTCELKSDSEEVSQARERSLS 385
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339
EM+LLDLYSGCGAMS+GLC+GA +SGV LVTRWAIDIN +AC+S++ NHPET+VRNE+A+
Sbjct: 386 EMTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQVRNESAE 445
Query: 340 DFLSLLKEWAKLCQYFSI--------YDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPN 391
DFL+LL+EW KLC FS+ +D D + ++ +D+ + + E++DD V
Sbjct: 446 DFLALLREWEKLCVRFSLIGNKDPNAHDLDPIDAKADEENDDDDNDNDNSEDEDDFEV-- 503
Query: 392 EEFEVESLTAVCYGDPNKTKKPGVYFK 418
FEV+ + +CYGDP ++FK
Sbjct: 504 --FEVQKIIGICYGDPKDKGDRELHFK 528
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 225/358 (62%), Gaps = 42/358 (11%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+G PV+ DEA +P RY S+ K +EEE L+ARCHY A VD
Sbjct: 140 FIGSPVAADEARSNWPKRYGRSTAAKKP--------------DEEEELKARCHYRSAKVD 185
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV-- 189
+Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 186 NVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVD 245
Query: 190 ----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ +
Sbjct: 246 GHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAY 305
Query: 246 LTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
TF+NI++E+ + DSD +S ISS ET S+ P +LLDLYSGCG MSTGLC+G
Sbjct: 306 STFANISSENGQSDSDTASGISSDDVDLETSSSMPTRT--ATLLDLYSGCGGMSTGLCLG 363
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A+LSG+KL TRWA+D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D
Sbjct: 364 AALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDV 422
Query: 361 DKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D N S E++ D+DS + +EF VE L +CYG ++ G+YFK
Sbjct: 423 DS------NLAS------SEDQADEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFK 466
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 224/358 (62%), Gaps = 42/358 (11%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+G PV+ DEA +P RY S+ K +EEE L+ARCHY A VD
Sbjct: 137 FIGSPVAADEARSNWPKRYGRSTAAKKP--------------DEEEELKARCHYRSAKVD 182
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV-- 189
+Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 183 NVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVD 242
Query: 190 ----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ +
Sbjct: 243 GHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAY 302
Query: 246 LTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
TF+NI++E+ + SD +S ISS ET S+ P +LLDLYSGCG MSTGLC+G
Sbjct: 303 STFANISSENGQSGSDTASGISSDDVDLETSSSMPTRT--ATLLDLYSGCGGMSTGLCLG 360
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A+LSG+KL TRWA+D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D
Sbjct: 361 AALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDV 419
Query: 361 DKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D N S E++ D+DS + +EF VE L +CYG ++ G+YFK
Sbjct: 420 DS------NLAS------SEDQADEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFK 463
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
Length = 784
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 224/358 (62%), Gaps = 42/358 (11%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+G PV+ DEA +P RY S+ K +EEE L+ARCHY A VD
Sbjct: 9 FIGSPVAADEARSNWPKRYGRSTAAKKP--------------DEEEELKARCHYRSAKVD 54
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV-- 189
+Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 55 NVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVD 114
Query: 190 ----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ +
Sbjct: 115 GHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAY 174
Query: 246 LTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
TF+NI++E+ + SD +S ISS ET S+ P +LLDLYSGCG MSTGLC+G
Sbjct: 175 STFANISSENGQSGSDTASGISSDDVDLETSSSMPT--RTATLLDLYSGCGGMSTGLCLG 232
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A+LSG+KL TRWA+D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D
Sbjct: 233 AALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDV 291
Query: 361 DKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D N S E++ D+DS + +EF VE L +CYG ++ G+YFK
Sbjct: 292 DS------NLAS------SEDQADEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFK 335
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 236/364 (64%), Gaps = 27/364 (7%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
KK K D D FVG P+ EA +R+P RY KK + +++ GA E E++
Sbjct: 7 KKGVKADEDHDCRFVGTPIPDGEARRRWPARYP------KKPRQGNSITN-GAAFEYEDL 59
Query: 119 LQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAE 178
L A+CHY +A V+G +YNL DD YVKAE G DYI RIVE FE++DGE YF A+WF+R E
Sbjct: 60 L-AKCHYERAEVEGFVYNLHDDVYVKAETGKPDYIGRIVEFFEAIDGEYYFTAQWFFRVE 118
Query: 179 DTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYD 238
DT+I + DR RVFLSD ++DN L+CIVSK KI + D E K IP CDLYY+
Sbjct: 119 DTIIGSVGDFHDRCRVFLSDEKNDNVLDCIVSKIKIVQ----RDPEQKGP-IPSCDLYYN 173
Query: 239 MKYTLPHLTFSNINNESNRRDSDASSTISSE----TGSNSPIGEPEMSLLDLYSGCGAMS 294
M Y++P+ +F+N++ + +R S+ SST+S E T + + E + ++LDLYSGCGAMS
Sbjct: 174 MSYSVPYSSFTNLSKDKSRAGSEESSTVSFEDAVDTSNEETLSEKKTTVLDLYSGCGAMS 233
Query: 295 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 354
TGLC GA L+G+ + T WA+D+N AC+SL+ NH E KVRNE A+ FL+LLKEW KLC+
Sbjct: 234 TGLCHGAHLAGLNIETMWAVDMNKDACRSLQLNHSEAKVRNENAEHFLALLKEWEKLCEK 293
Query: 355 FSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPG 414
+S S + E+ +E+ E++DD++ +EEF VE L +CYGDP K K G
Sbjct: 294 YS---------GSKDLDLEETMQEDNSEDNDDAD-SDEEFVVEKLLDICYGDPAKIGKDG 343
Query: 415 VYFK 418
+ FK
Sbjct: 344 IKFK 347
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/372 (46%), Positives = 226/372 (60%), Gaps = 37/372 (9%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
RV +++ D + FVG V EA +P RY+ S+ K EE
Sbjct: 122 RVGRRSAAAGGDHEPEFVGNAVPAAEARSNWPKRYERSTAAKKP--------------EE 167
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
+E L A+CHY A VD +Y LGDD YVKA E DYI RI E FE D YF RWF+
Sbjct: 168 DEELNAKCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFF 227
Query: 176 RAEDTVIKDLAYL------VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
RAEDTVI L + D +RVFLS+ ++DN L+CI+SK KI V NMD +AK +
Sbjct: 228 RAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQL 287
Query: 230 IPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSE-TGSNSPIGEPE--MSLLDL 286
I CDLYYDM Y++ + TF+NI++E+ + S+ +S ISS+ +P PE +LLDL
Sbjct: 288 IEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDVDLEAPSSMPERTATLLDL 347
Query: 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLK 346
YSGCG MSTGLC+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLK
Sbjct: 348 YSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLK 407
Query: 347 EWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGD 406
EWA LC+ + D D N +++E+E D D EF VE L +CYG
Sbjct: 408 EWAVLCEKYVHQDVDS------NLAGSEDQEDEGSPLDKD------EFVVEKLIGICYG- 454
Query: 407 PNKTKKPGVYFK 418
+K G+YFK
Sbjct: 455 -GSGRKDGIYFK 465
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 228/374 (60%), Gaps = 42/374 (11%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
RV +++ D + FVG V EA +P RY+ S+ K EE
Sbjct: 128 RVGRRSAAAGGDHEPEFVGNAVPAVEARSNWPKRYERSTAATKP--------------EE 173
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
+E L+ARCHY A VD +Y LGDD YVKA E DYI RI E FE D YF WF+
Sbjct: 174 DEELKARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCHWFF 233
Query: 176 RAEDTVIKDL------AYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
RAEDTVI L ++ D +RVFLS+ ++DN L+CI+SK KI V N+D +AK +
Sbjct: 234 RAEDTVINSLVSINVDGHMHDPRRVFLSEEKNDNVLDCIISKVKIVRVDPNIDPKAKAQL 293
Query: 230 IPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLL 284
I CDLYYDM Y++ + TF+NI++E+ + S+ +S IS ET S+ P E +LL
Sbjct: 294 IEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISDGDVDLETSSSMP--ERTATLL 351
Query: 285 DLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL 344
DLYSGCG MSTGLC+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+L
Sbjct: 352 DLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLAL 411
Query: 345 LKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCY 404
LKEWA LC+ + + D D N +++E+E D D EF VE L +CY
Sbjct: 412 LKEWAVLCEKY-VQDIDS------NLAGSEDQEDEGSPLDKD------EFVVEKLIGICY 458
Query: 405 GDPNKTKKPGVYFK 418
G +K G+YFK
Sbjct: 459 G--GSGRKNGIYFK 470
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 230/374 (61%), Gaps = 42/374 (11%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
RV +++ D F+G PV+ EA +P RY+ S+ +K EE
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVAAAEAHSNWPKRYERSTAANKP--------------EE 170
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
++ L+ARCHY A VD +Y LGDD YVKA E DYI RI E FE D YF RWF+
Sbjct: 171 DDELKARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFF 230
Query: 176 RAEDTVIKDLAYL------VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
RAEDTVI L + D +RVFLS+ ++DN L+CI+SK KI V NMD +AK +
Sbjct: 231 RAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQL 290
Query: 230 IPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLL 284
I CDLYYDM Y++ + TF+NI++E+ + S+ +S ISS ET SN P E +LL
Sbjct: 291 IEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLL 348
Query: 285 DLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL 344
DLYSGCG MSTGLC+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+L
Sbjct: 349 DLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLAL 408
Query: 345 LKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCY 404
LKEWA LC+ + D D + ++ E++E+ + D D EF V+ L + Y
Sbjct: 409 LKEWAVLCEKYVHQDVD-------SNLAGSEDQEDADTLDKD------EFVVQKLIGIRY 455
Query: 405 GDPNKTKKPGVYFK 418
+ K GVYFK
Sbjct: 456 DGTGRKK--GVYFK 467
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 229/374 (61%), Gaps = 42/374 (11%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
RV +++ D F+G PV EA +P RY+ S+ +K EE
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVGAAEAHSNWPKRYERSTAANKP--------------EE 170
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
++ L+ARCHY A VD +Y LGDD YVKA E DYI RI E FE D YF RWF+
Sbjct: 171 DDELKARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFF 230
Query: 176 RAEDTVIKDLAYL------VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
RAEDTVI L + D +RVFLS+ ++DN L+CI+SK KI V NMD +AK +
Sbjct: 231 RAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQL 290
Query: 230 IPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLL 284
I CDLYYDM Y++ + TF+NI++E+ + S+ +S ISS ET SN P E +LL
Sbjct: 291 IEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLL 348
Query: 285 DLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL 344
DLYSGCG MSTGLC+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+L
Sbjct: 349 DLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLAL 408
Query: 345 LKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCY 404
LKEWA LC+ + D D + ++ E++E+ + D D EF V+ L + Y
Sbjct: 409 LKEWAVLCEKYVHQDVD-------SNLAGSEDQEDADTLDKD------EFVVQKLIGIRY 455
Query: 405 GDPNKTKKPGVYFK 418
+ K GVYFK
Sbjct: 456 DGTGRKK--GVYFK 467
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 230/374 (61%), Gaps = 42/374 (11%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
RV +++ D F+G PV+ EA +P RY+ S+ +K EE
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVAAAEAHSNWPKRYERSTAANKP--------------EE 170
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
++ L+ARCHY A VD +Y LGDD YVKA E DYI RI E FE D YF RWF+
Sbjct: 171 DDELKARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFF 230
Query: 176 RAEDTVIKDLAYL------VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
RAEDTVI L + D +RVFLS+ ++DN L+CI+SK KI V NMD +AK +
Sbjct: 231 RAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQL 290
Query: 230 IPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLL 284
I CDLYYDM Y++ + TF+NI++E+ + S+ +S ISS ET SN P E +LL
Sbjct: 291 IEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLL 348
Query: 285 DLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL 344
DLYSGCG MSTGLC+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+L
Sbjct: 349 DLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLAL 408
Query: 345 LKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCY 404
LKEWA LC+ + D D + ++ E++E+ + D D EF V+ L + Y
Sbjct: 409 LKEWAVLCEKYVHQDVD-------SNLAGSEDQEDADTLDKD------EFVVQKLIGIRY 455
Query: 405 GDPNKTKKPGVYFK 418
+ K GVYFK
Sbjct: 456 DGTGRKK--GVYFK 467
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/358 (47%), Positives = 221/358 (61%), Gaps = 42/358 (11%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+G PV+ DEA +P RY S+ K +EEE L+ARCHY A VD
Sbjct: 9 FIGSPVAADEARSNWPKRYGRSTAAKKP--------------DEEEELKARCHYRSAKVD 54
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV-- 189
+Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 55 NVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVD 114
Query: 190 ----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
D +RVFLS+ ++DN L+CI+SK KI V N D +AK + I CDLYYD Y++ +
Sbjct: 115 GHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNXDPKAKAQLIESCDLYYDXSYSVAY 174
Query: 246 LTFSNINNESNRRDSDASSTISS-----ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
TF+NI++E+ + SD +S ISS ET S+ P +LLDLYSGCG STGLC+G
Sbjct: 175 STFANISSENGQSGSDTASGISSDDVDLETSSSXPT--RTATLLDLYSGCGGXSTGLCLG 232
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A+LSG+KL TRWA+D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D
Sbjct: 233 AALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDV 291
Query: 361 DKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D N S E++ D+DS + +EF VE L +CYG ++ G+YFK
Sbjct: 292 DS------NLAS------SEDQADEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFK 335
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 245/370 (66%), Gaps = 14/370 (3%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G PVSV E++ R+P RY KK K+ A ++ G +++E++
Sbjct: 6 KQMKRAEPESDLCFAGKPVSVVESMIRWPHRYP-----SKKTKLEAATATKG--DKKEKI 58
Query: 119 LQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAE 178
A+ HY QA VDG L NL DD YV G +++I +++E+FE+ DG PY + RWFYR
Sbjct: 59 KLAKRHYEQALVDGVLINLNDDVYVTGLPGKLNFIGKVIEMFEADDGVPYSRIRWFYRPN 118
Query: 179 DTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLYY 237
DT+I+ A LV +KRVFLS+VEDDNPL CI SK IA+V + +Q+ IPPCD YY
Sbjct: 119 DTLIERFAELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYY 178
Query: 238 DMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGL 297
DMKY +P+L F++ ++++ + ++ + S + + + E LLDLYSGCGAMSTG
Sbjct: 179 DMKYEVPYLNFTSADDDTA---ASSTLSSDSASNCFETLHKDEKYLLDLYSGCGAMSTGF 235
Query: 298 CIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSI 357
C+GAS++GVKL+T+W++DIN AC S + NHPET+VRNEAA+DFL LLKEW +LC+ FS+
Sbjct: 236 CMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCERFSL 295
Query: 358 YDTDKVPEQSLNFMSEDEEEEEEEENDDDSN--VPNEEFEVESLTAVCYGDPNKTKKPGV 415
+ + P +S++ + ++E +E ++ ++ + + EFEVE + +GDP T + +
Sbjct: 296 SSSTE-PMESISELEDEESDENDDIDEASTGMELSAGEFEVEKFVGIVFGDPKGTGEKTL 354
Query: 416 YFKECCLIIC 425
+ K +C
Sbjct: 355 HLKGTVYSVC 364
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 246/378 (65%), Gaps = 28/378 (7%)
Query: 56 RVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEE 115
+VK + + D+ F+ P +A R+P RY +K V + ++
Sbjct: 54 KVKAELSVEEDDAPARFLQPHFPDSDARVRWPLRYA--------RKKKNVVEEKKSRDDS 105
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175
EEV+QA HY+QA VD YNL DDA+VKAE DYI +I+E+FE+VDG+ YF A+W+Y
Sbjct: 106 EEVIQALHHYSQAKVDNITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYFTAQWYY 165
Query: 176 RAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDL 235
RA+DTV+KD A+L++ KRVF S+V DDNPL+C+V K IA + MD K+ +P CD
Sbjct: 166 RAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMD--EKKNCLPSCDF 223
Query: 236 YYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSN------SPIGE---------PE 280
Y DM Y LP+ +F + + S+ SSTISS+ +N S IG+ P+
Sbjct: 224 YCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQCCKPD 283
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
++LLDLYSGCGAMSTGLC+G +LSGV LVT+WA+D+N +AC+SL+FNHPET+VRNE A+D
Sbjct: 284 VALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNEMAED 343
Query: 341 FLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLT 400
FLSL+KEW LC+Y S+ + + ++ ++ ++++EEE E+E ++ E ++
Sbjct: 344 FLSLVKEWEVLCKYCSLVKSKEPQQKYIDLFADEDEEENEDEKTEEDEEVFEVEKI---L 400
Query: 401 AVCYGDPNKTKKPGVYFK 418
A+CYGDPN+TKK G++ K
Sbjct: 401 AICYGDPNETKKRGLFLK 418
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 225/321 (70%), Gaps = 20/321 (6%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 172
++ EEV+QA HY+QA VD YNL DDA+VKAE DYI +I+E+FE+VDG+ YF A+
Sbjct: 1 DDSEEVIQALHHYSQAKVDNITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYFTAQ 60
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
W+YRA+DTV+KD A+L++ KRVF S+V DDNPL+C+V K IA + MD K+ +P
Sbjct: 61 WYYRAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMD--EKKNCLPS 118
Query: 233 CDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSN------SPIGE-------- 278
CD Y DM Y LP+ +F + + S+ SSTISS+ +N S IG+
Sbjct: 119 CDFYCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQCC 178
Query: 279 -PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
P+++LLDLYSGCGAMSTGLC+G +LSGV LVT+WA+D+N +AC+SL+FNHPET+VRNE
Sbjct: 179 KPDVALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNEM 238
Query: 338 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVE 397
A+DFLSL+KEW LC+Y S+ + + ++ ++ ++++EEE E+E ++ E ++
Sbjct: 239 AEDFLSLVKEWEVLCKYCSLVKSKEPQQKYIDLFADEDEEENEDEKTEEDEEVFEVEKI- 297
Query: 398 SLTAVCYGDPNKTKKPGVYFK 418
A+CYGDPN+TKK G++ K
Sbjct: 298 --LAICYGDPNETKKRGLFLK 316
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 235/355 (66%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F++ ++ S+ S +S + + + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFTSTDDGSDASSSLSSDSALN---CFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 233/355 (65%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F++ + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFTS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 233/355 (65%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F++ + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFTS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 233/355 (65%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F++ + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFTS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 233/355 (65%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F++ + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFTS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 233/355 (65%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F++ + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFTS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 236/366 (64%), Gaps = 31/366 (8%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+G P+ +EA K+YP RY KK K+ +S N++E+++QARCHYT+A VD
Sbjct: 178 FLGEPMEDEEARKQYPKRYV-----GKKPKMNGQNNS----NDDEDIIQARCHYTKALVD 228
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDR 191
G Y+L DDA+ +E YI +IVE+FE++ G YF A+W+YR+ DTVIK V
Sbjct: 229 GINYDLYDDAHSGEKEEP--YICKIVEMFEAIGGLLYFTAQWYYRSRDTVIKHCT-TVAC 285
Query: 192 KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNI 251
RVF SDV DDNPLNC+V K I + N+D + K K+IP C+ Y D KY LP+ TF N+
Sbjct: 286 GRVFFSDVRDDNPLNCLVEKLHIVRLTLNVDEDLKSKSIPVCNYYCDTKYLLPYSTFVNL 345
Query: 252 NNESNRRDSDASST-------ISSETGSNSPIGE---PEMSLLDLYSGCGAMSTGLCIGA 301
E+ + SD S+ + SE S P GE E+ LLDLYSGCGAMSTGLC+GA
Sbjct: 346 XAENMQTGSDDSTISVEDDVCLDSEVDSKLPNGERAKSEVRLLDLYSGCGAMSTGLCLGA 405
Query: 302 SLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTD 361
L+ V LVTRWA+D N +ACKSL NHPET+VRNEAA+DFL++LK W KLC + + D
Sbjct: 406 HLANVNLVTRWAVDYNKYACKSLAQNHPETEVRNEAAEDFLTMLKAWRKLCMCLKLVEND 465
Query: 362 KVPE----QSLNFMSEDEEEEEEEENDD---DSNVPN--EEFEVESLTAVCYGDPNKTKK 412
+ E L+F ++++EEEEE+ ++ NV N E FEV+ + VC+GDP KT+K
Sbjct: 466 NLEEDVDKSILDFFGKEDDEEEEEDEEEEDVSGNVKNDSEVFEVDCVIGVCFGDPKKTEK 525
Query: 413 PGVYFK 418
G+YFK
Sbjct: 526 KGIYFK 531
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 232/355 (65%), Gaps = 8/355 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F + + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFIS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 356
C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS
Sbjct: 241 FCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFS 300
Query: 357 IY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
+ T+ V S E EE ++ +E + + EFEVE + +GDP T
Sbjct: 301 LVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGT 355
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 232/369 (62%), Gaps = 36/369 (9%)
Query: 63 KNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQAR 122
K K + F VG PV +EA +R+P RY+ + + E+E VL +
Sbjct: 65 KGKGKAVSFLVGDPVPDEEARQRWPWRYEEKVRDDE---------------EDELVLDVK 109
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
CHY+QA ++ C++NLGD AYVKA +G +YI RI+E F+++D E YF+ +WF+R EDTV+
Sbjct: 110 CHYSQAEIEKCIFNLGDCAYVKASKGGRNYIGRILEFFKTMDDEDYFRVQWFFRPEDTVM 169
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYT 242
++ ++KR+F S++ +DN L+CIVSK I ++ +++L K K+I PCD YYDMKY
Sbjct: 170 EEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNL--KSKSILPCDFYYDMKYL 227
Query: 243 LPHLTFSN--INNESNRRDSDASSTISS-----------ETGSNSPIGEPEMSLLDLYSG 289
+ + TF ++N ++R + S+ + + S+ P +PE++LLD+YSG
Sbjct: 228 IDYSTFCTMEVDNSADRTNLSTSACLKTVHMNGIKPEFNRMSSHKPY-KPELALLDIYSG 286
Query: 290 CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 349
CG MSTGLC+GA LSGV LVTRWA+DIN AC+SLK NHPET++RNE+A+DFL LLKEW
Sbjct: 287 CGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNESAEDFLDLLKEWD 346
Query: 350 KLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNK 409
KLC+ + + D ++SL S + + + P+ EFEV SL +CYGDP
Sbjct: 347 KLCKRYVVKDV----QESLKVNSRVLRAAKVNSKTGNKS-PSGEFEVASLIDICYGDPTN 401
Query: 410 TKKPGVYFK 418
+ K G+ F+
Sbjct: 402 SGKHGLKFQ 410
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 228/359 (63%), Gaps = 14/359 (3%)
Query: 62 QKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQA 121
Q+ +P+ DL G PVSV E++ R+P RY KK K+ A +++E++ A
Sbjct: 1 QRAEPEGDLCRAGKPVSVVESMIRWPHRYP-----SKKTKLEAATKG----DKKEKIKLA 51
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
+ HY QA VDG L NL DD YV G +++I +++E+FE+ DG PY + RWFYR +DT+
Sbjct: 52 KRHYEQALVDGVLINLNDDVYVTHATGKLNFIGKVIEMFEADDGVPYCRIRWFYRPDDTL 111
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLYYDMK 240
I+ A LV +KRVFLS+VEDDNPL CI SK IA+V + +Q+ IPPCD YYDMK
Sbjct: 112 IERFAELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYYDMK 171
Query: 241 YTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
Y +P+L N+ + + + ++ + S + + + E LLDLYSGCGAMSTG C+G
Sbjct: 172 YEVPYL---NLTSADDDSAASSTLSSDSASNCFETLHKDEKFLLDLYSGCGAMSTGFCMG 228
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS-IYD 359
AS++GVKL+T+W++DIN AC S + NHPET+VRNEAA+DFL LLKEW +LC+ FS I
Sbjct: 229 ASIAGVKLITKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCERFSLISS 288
Query: 360 TDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
T+ + S E +E ++ +E D + EFEVE + +GDP T + ++ K
Sbjct: 289 TEPMESISELEDEESDENDDIDEASTDMELSAGEFEVEKFVGIVFGDPKGTGEKTLHLK 347
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 220/370 (59%), Gaps = 48/370 (12%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
D D FVG P EA ++P RY+ ++ + +EEE ++ARCHY+
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRP--------------DEEEDIKARCHYS 165
Query: 127 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 186
A VDG LY L DD YVKAEE DYI RI E FE D YF RWF+RAEDTVI +
Sbjct: 166 SAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCRYFTCRWFFRAEDTVISSIM 225
Query: 187 Y------LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMK 240
D KRVFLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM
Sbjct: 226 MENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVHIDPNMESEAKARRLADCDLYYDMS 285
Query: 241 YTLPHLTFSNINNESNRRDSDAS------------STISSETGSNSPIGEPEMSLLDLYS 288
YT+ + TF+NI E+ SD + + S++ ++S +G+ +LLDLYS
Sbjct: 286 YTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEASS-VGK--ATLLDLYS 342
Query: 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEW 348
GCG MSTGLC+GA+L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W
Sbjct: 343 GCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGW 402
Query: 349 AKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPN 408
LC D+ ++ ++F S E EE DDD + +EF VE L +CYG
Sbjct: 403 HSLC--------DEYVKKDIDFSSAGASENEE---DDDEPLEKDEFVVEKLAGICYG--G 449
Query: 409 KTKKPGVYFK 418
++ G+YFK
Sbjct: 450 SGREDGLYFK 459
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
Length = 719
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 212/358 (59%), Gaps = 46/358 (12%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
D D FVG P EA ++P RY+ ++ + +EEE ++ARCHY+
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRP--------------DEEEDIKARCHYS 165
Query: 127 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 186
A VDG LY L DD YVKAEE DYI RI E FE D YF RWF+RAEDTVI +
Sbjct: 166 SAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIM 225
Query: 187 Y------LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMK 240
D KRVFLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM
Sbjct: 226 MENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMS 285
Query: 241 YTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
YT+ + TF+NI DS+ASS + +LLDLYSGCG MSTGLC+G
Sbjct: 286 YTVAYSTFANIPLGKVVSDSEASSVGKA-------------TLLDLYSGCGGMSTGLCLG 332
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A+L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W LC
Sbjct: 333 AALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLC-------- 384
Query: 361 DKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D+ ++ ++F S E EE DDD + +EF VE L +CYG ++ G+YFK
Sbjct: 385 DEYVKKDIDFSSAGASENEE---DDDEPLEKDEFVVEKLAGICYG--GSGREDGLYFK 437
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 220/370 (59%), Gaps = 48/370 (12%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
D D FVG P EA ++P RY+ ++ + +EEE ++ARCHY+
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRP--------------DEEEDIKARCHYS 165
Query: 127 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 186
A VDG LY L DD YVKAEE DYI RI E FE D YF RWF+RAEDTVI +
Sbjct: 166 SAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIM 225
Query: 187 Y------LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMK 240
D KRVFLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM
Sbjct: 226 MENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMS 285
Query: 241 YTLPHLTFSNINNESNRRDSDAS------------STISSETGSNSPIGEPEMSLLDLYS 288
YT+ + TF+NI E+ SD + + S++ ++S +G+ +LLDLYS
Sbjct: 286 YTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEASS-VGK--ATLLDLYS 342
Query: 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEW 348
GCG MSTGLC+GA+L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W
Sbjct: 343 GCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGW 402
Query: 349 AKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPN 408
LC D+ ++ ++F S E EE DDD + +EF VE L +CYG
Sbjct: 403 HSLC--------DEYVKKDIDFSSAGASENEE---DDDEPLEKDEFVVEKLAGICYG--G 449
Query: 409 KTKKPGVYFK 418
++ G+YFK
Sbjct: 450 SGREDGLYFK 459
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 220/370 (59%), Gaps = 48/370 (12%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
D D FVG P EA ++P RY+ ++ + +EEE ++ARCHY+
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRP--------------DEEEDIKARCHYS 165
Query: 127 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 186
A VDG LY L DD YVKAEE DYI RI E FE D YF RWF+RAEDTVI +
Sbjct: 166 SAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIM 225
Query: 187 Y------LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMK 240
D KRVFLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM
Sbjct: 226 MENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMS 285
Query: 241 YTLPHLTFSNINNESNRRDSDAS------------STISSETGSNSPIGEPEMSLLDLYS 288
YT+ + TF+NI E+ SD + + S++ ++S +G+ +LLDLYS
Sbjct: 286 YTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEASS-VGK--ATLLDLYS 342
Query: 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEW 348
GCG MSTGLC+GA+L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W
Sbjct: 343 GCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGW 402
Query: 349 AKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPN 408
LC D+ ++ ++F S E EE DDD + +EF VE L +CYG
Sbjct: 403 HSLC--------DEYVKKDIDFSSAGASENEE---DDDEPLEKDEFVVEKLAGICYG--G 449
Query: 409 KTKKPGVYFK 418
++ G+YFK
Sbjct: 450 SGREDGLYFK 459
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 235/399 (58%), Gaps = 50/399 (12%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYK----YSSKGHKKKK 101
VKEEPV +V +K + F+ P+ EA +PDRYK K +KK
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVD-GCLYNLGDDAYVKAEEGAVDYIARIVELF 160
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+F
Sbjct: 84 TKD--------DEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMF 135
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAAN 220
E V+G+ YF ARWFYR DTV+K+ L+++KRVF S+++D N L + K I + N
Sbjct: 136 EGVNGKLYFTARWFYRPSDTVMKEFEILINKKRVFFSEIQDTNELGLLEKKLNILMIPLN 195
Query: 221 MDLEAKQKNIPP---CDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET------G 271
E ++ IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 196 ---ENTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAA 251
Query: 272 SNSPIGE--------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKS 323
+ S IGE E +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKS
Sbjct: 252 AISEIGECSQETEGQKEATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKS 311
Query: 324 LKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEDEEEEE 379
L+ NHPET VRN A+DFL LLKEW KLC +FS+ ++ E LN + ++E+ E
Sbjct: 312 LQHNHPETNVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSE 371
Query: 380 EEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
E EN+DD V F V+ + + +G P K K G+Y K
Sbjct: 372 ESENEDDGEV----FTVDKIVGISFGVPKKLLKRGLYLK 406
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/369 (46%), Positives = 242/369 (65%), Gaps = 29/369 (7%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
FVG V EA K++P RY ++K K ++ +S L++ EE+++ARCHY +A VD
Sbjct: 185 FVGNQVPDAEARKKWPHRY--ANKIKNKTPISKPSNS---LDDSEEIIKARCHYKRAEVD 239
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDR 191
G +YNL DDA+V+A +G DYI RI+E+FES D P+F A+W+YR+ DT+IKD Y+ D
Sbjct: 240 GIIYNLYDDAHVQASDGEADYICRIIEMFESEDRTPHFTAQWYYRSTDTIIKD-KYISDP 298
Query: 192 KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNI 251
K VF S++ +DNPL+C+ K KI +A +D E ++ CD Y DM Y LP+ TF +
Sbjct: 299 KCVFFSEIRNDNPLDCLTRKLKIVRLALGVDSETRRAKTLNCDFYCDMLYLLPYSTFVKL 358
Query: 252 NNESNRRDSDASSTISS------------ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCI 299
+E+N ++SSTISS E +S + E++LLDLYSGCGAMSTGLC+
Sbjct: 359 PSENNTTAPESSSTISSDIDAAGVKFECDEVCESSGRRKSEVALLDLYSGCGAMSTGLCL 418
Query: 300 GASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYD 359
GA+LSG+ LVT+WA+D+N HAC+SL+ NHPET+VRNE A+DFL LLKEW KLC FS+
Sbjct: 419 GANLSGLNLVTKWAVDLNKHACESLRLNHPETQVRNETAEDFLMLLKEWEKLCIRFSLVK 478
Query: 360 TDKVPE--QSLNF-------MSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
D PE Q+ +F ++EEE+++ + D+N +E FEVE + VC+GDP +
Sbjct: 479 NDD-PEKQQTYSFDMDDEDDDDDEEEEDDDNNDVSDNNDDSEVFEVEKILEVCHGDPKEI 537
Query: 411 -KKPGVYFK 418
+ +YFK
Sbjct: 538 GGQRDLYFK 546
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/309 (48%), Positives = 205/309 (66%), Gaps = 3/309 (0%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 172
++ + ++QA+CH+TQA VDG +YNLGDDAYV+A DYI +IVE F++VDG YF A+
Sbjct: 7 DDADHLIQAKCHFTQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQAVDGTQYFTAQ 66
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
WFYRA+DTVIK +D KRVF S+++DDNPL C+V K KI + +N+ L K+
Sbjct: 67 WFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLKSN 126
Query: 233 CDLYYDMKYTLPHLTFSNINNE-SNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCG 291
D YYDM Y LP+ +F ++ + S+ S+ S + + EM+LLDLYSGCG
Sbjct: 127 SDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDTVDVKEQKLEMNLLDLYSGCG 186
Query: 292 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 351
AMSTGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL EW +L
Sbjct: 187 AMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLGEWRQL 246
Query: 352 CQYFSIY--DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNK 409
C S+ ++ P + E++ E+E+ + E FEVE L +CYGDP +
Sbjct: 247 CASCSLLRNNSPTHPFLKVRDEDEEDNNNEDEDEGSGDDEQGEIFEVEELLEICYGDPKE 306
Query: 410 TKKPGVYFK 418
KPG+YFK
Sbjct: 307 INKPGLYFK 315
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/399 (42%), Positives = 233/399 (58%), Gaps = 50/399 (12%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYK----YSSKGHKKKK 101
VKEEPV +V +K + F+ P+ EA +PDRYK K +KK
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVD-GCLYNLGDDAYVKAEEGAVDYIARIVELF 160
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+F
Sbjct: 84 TKD--------DEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMF 135
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAAN 220
E +G+ YF ARWFYR DTV+K+ L+ +KRVF S+++D N L + K I + N
Sbjct: 136 EGANGKLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLN 195
Query: 221 MDLEAKQKNIPP---CDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET------G 271
E ++ IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 196 ---ENTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAA 251
Query: 272 SNSPIGE--------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKS 323
+ S IGE + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKS
Sbjct: 252 AISEIGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKS 311
Query: 324 LKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEDEEEEE 379
L+ NHPET VRN A+DFL LLKEW KLC +FS+ ++ E LN + ++E+ E
Sbjct: 312 LQHNHPETNVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSE 371
Query: 380 EEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
E EN+DD V F V+ + + +G P K K G+Y K
Sbjct: 372 ESENEDDGEV----FTVDKIVGISFGVPKKLLKRGLYLK 406
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/292 (50%), Positives = 197/292 (67%), Gaps = 20/292 (6%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
+ D VG + +EA +R+P+RY+ K ++ + ++ EE+++ARCHY
Sbjct: 8 EGDCRLVGEVIPDEEARQRWPERYE--PKVYRNWFCSTK-------DDSEEIVKARCHYR 58
Query: 127 QASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDL 185
QA +DG + NL DDA+VKA + A YI +IVELF ++DG PYF A+WFYRA DTVIKD
Sbjct: 59 QAEIDGRVIVNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFYRARDTVIKDH 118
Query: 186 AYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
A L+D KRVF S++ DDNPL+C+V K IA V N+DLEA++ I CD YYDM Y L +
Sbjct: 119 ANLIDNKRVFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDYYYDMLYLLDY 178
Query: 246 LTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSG 305
+F + E+N S E EM+LLDLYSGCGAMS+GLC+GA +SG
Sbjct: 179 SSFIKLPPENN----------SEEVSQARERSLSEMTLLDLYSGCGAMSSGLCLGAKMSG 228
Query: 306 VKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSI 357
V LVTRWAIDIN +AC+S++ NHPET+VRNE+A+DFL+LL+EW KLC F +
Sbjct: 229 VNLVTRWAIDINAYACESVRLNHPETQVRNESAEDFLALLREWEKLCCKFLV 280
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/399 (42%), Positives = 232/399 (58%), Gaps = 50/399 (12%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYK----YSSKGHKKKK 101
VKEEPV +V +K + F+ P+ EA +PDRYK K +KK
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVD-GCLYNLGDDAYVKAEEGAVDYIARIVELF 160
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+F
Sbjct: 84 TKD--------DEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMF 135
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAAN 220
E +G+ YF ARWFYR DTV+K+ L+ KRVF S+++D N L + K I + N
Sbjct: 136 EGANGKLYFTARWFYRPSDTVMKEFEILIKEKRVFFSEIQDTNELGLLEKKLNILMIPLN 195
Query: 221 MDLEAKQKNIPP---CDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET------G 271
E ++ IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 196 ---ENTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAA 251
Query: 272 SNSPIGE--------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKS 323
+ S IGE + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKS
Sbjct: 252 AISEIGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKS 311
Query: 324 LKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEDEEEEE 379
L+ NHPET VRN A+DFL LLKEW KLC +FS+ ++ E LN + ++E+ E
Sbjct: 312 LQHNHPETNVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSE 371
Query: 380 EEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
E EN+DD V F V+ + + +G P K K G+Y K
Sbjct: 372 ESENEDDGEV----FTVDKIVGISFGVPKKLLKRGLYLK 406
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 210/310 (67%), Gaps = 4/310 (1%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 172
++ ++++QA+CH+TQA VDG +YNLGDDAYV+A DYI +IVE F++VDG YF A+
Sbjct: 7 DDGDQLIQAKCHFTQAVVDGQIYNLGDDAYVQASSDEDDYICKIVEFFQAVDGMQYFTAQ 66
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
WFYRA+DTVIK +D KRVF S+++DDNPL C+V K KI + +N+ K+
Sbjct: 67 WFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVAIPSNVRPPLKESLRSN 126
Query: 233 CDLYYDMKYTLPHLTFSNINNE-SNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCG 291
D YYDM Y LP+ +F ++ + S+ S+ S + + E +LLDLYSGCG
Sbjct: 127 SDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDTVDVKEQKLEKNLLDLYSGCG 186
Query: 292 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 351
AMSTGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL+EW +L
Sbjct: 187 AMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQL 246
Query: 352 CQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEE---FEVESLTAVCYGDPN 408
C S+ + L ED++++ + E++D+ + +E+ FEVE L +CYGDP
Sbjct: 247 CASCSLLRNNTPTHSFLKVRDEDDKDDNDNEDEDEGSGDDEQGEIFEVEQLLEICYGDPK 306
Query: 409 KTKKPGVYFK 418
+ KPG+YFK
Sbjct: 307 EKNKPGLYFK 316
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 73 VGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDG 132
VG V DEA K++P RY+ + + KK K SS N + VL +CHY QA V
Sbjct: 1 VGDAVPDDEARKQWPHRYEINDQIMKKDKRT---SSQTFANAGKAVLDVKCHYLQAKVSR 57
Query: 133 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRK 192
+ +G+ A+VK EG +YI R++E FE+ GE YF+ +WF+ AEDTVI + A D +
Sbjct: 58 YTFCIGECAFVKGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPR 117
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNIN 252
R+F SD+ DDN L+CIVSK I +V ++D K K++P D YYDMKY++ + TFS I
Sbjct: 118 RLFYSDLTDDNLLDCIVSKVTIVQVPPSVD--GKSKSVPSSDYYYDMKYSIDYSTFSTIE 175
Query: 253 NESN---------RRDSDASSTISSETGSNSPIGEP-EMSLLDLYSGCGAMSTGLCIGAS 302
E R +D I SP+ E E+SLLDLY GCG MSTGLC+GA
Sbjct: 176 MEDTDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGAR 235
Query: 303 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 362
GV L RWAID + AC+S + NHPET+VRNE DDFL LLKEW KLC+ + + K
Sbjct: 236 GGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTK 295
Query: 363 VPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D E E D S VP EEFEV L +C+GDPNK K G+YFK
Sbjct: 296 A--------CVDSTTESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFK 343
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 233/399 (58%), Gaps = 50/399 (12%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYK----YSSKGHKKKK 101
VKEEPV +V +K + F+ P+ EA +PDRYK K +KK
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASV-DGCLYNLGDDAYVKAEEGAVDYIARIVELF 160
+E+ E+++ARCHY +A V + +Y L DDAYV++ EG +I +I+E+F
Sbjct: 84 TKD--------DEKVEIIRARCHYRRAIVGERQIYELNDDAYVQSGEGKDPFICKIIEMF 135
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAAN 220
E +G+ YF ARWFYR DTV+K+ L+ +KRVF S+++D N L + K I + N
Sbjct: 136 EGANGKLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLN 195
Query: 221 MDLEAKQKNIPP---CDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET------G 271
E ++ IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 196 ---ENTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAA 251
Query: 272 SNSPIGE--------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKS 323
+ S IGE + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKS
Sbjct: 252 AISEIGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKS 311
Query: 324 LKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEDEEEEE 379
L+ NHPET VRN A+DFL LLKEW KLC +FS+ ++ E LN + ++E+ E
Sbjct: 312 LQHNHPETNVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSE 371
Query: 380 EEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
E EN+DD V F V+ + + +G P K K G+Y K
Sbjct: 372 ESENEDDGEV----FTVDKIVGISFGVPKKLLKRGLYLK 406
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 224/381 (58%), Gaps = 37/381 (9%)
Query: 57 VKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEE 116
+ T + DSD FVG PV DEA +R+P RY S KG S + +E+
Sbjct: 220 ARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRY--SRKGSD--------SLLKQEPDED 269
Query: 117 EVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYR 176
E ++ARCHY A+VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R
Sbjct: 270 EEMKARCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFR 329
Query: 177 AEDTVIKDLAYLV-----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
DTVI V + KRVFLS ++DN + CIVSK KIA V NM +A+ I
Sbjct: 330 TADTVISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAIS 389
Query: 232 PCDLYYDMKYTLPHLTFSNINNESNRR-DSDASSTISSETGSNSPIGE------------ 278
CDLYYDM Y++ + TF+N+ +++ S+A+S IS + NS G+
Sbjct: 390 DCDLYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQ 449
Query: 279 -PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
SLLDLYSGCGAMSTGLC+G + SG+ L TRWA+DIN +AC LK NHP ++VRNE
Sbjct: 450 TETASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEK 509
Query: 338 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVE 397
+DFL+L+++W LC+ + ++ D + E S++ D ++ E +P + F+VE
Sbjct: 510 TEDFLALIQQWDALCRKYVVHKNDTL-EPSIDMPLNDADDVNEP-------LPEDIFDVE 561
Query: 398 SLTAVCYGDPNKTKKPGVYFK 418
L +CYGDP+ T K G++FK
Sbjct: 562 ELLEICYGDPSNTGKNGLWFK 582
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 204/313 (65%), Gaps = 10/313 (3%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 172
++ ++++QA+CH+ QA VDG +YNLGDDAYV+A DYI +IVE F++VDG YF A+
Sbjct: 7 DDADQLIQAKCHFAQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQAVDGMQYFTAQ 66
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
WFYRA+DTVIK ++ KRVF S+++DDNPL C+V K KI + +N+ L K+
Sbjct: 67 WFYRAKDTVIKAHDQFINNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLRSN 126
Query: 233 CDLYYDMKYTLPHLTFSNINNE-SNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCG 291
D YYDM Y LP+ +F ++ + S+ S+ S + + E +LLDLYSGCG
Sbjct: 127 SDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDTVDVKEQKLEKNLLDLYSGCG 186
Query: 292 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 351
AMSTGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL+EW +L
Sbjct: 187 AMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQL 246
Query: 352 CQYFSIYDTDKVPEQSLNF------MSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYG 405
C S+ + L + D +E+E DD+ E FEVE L +CYG
Sbjct: 247 CASCSLLRNNTPTHPFLKVRDEDEEDNNDNGDEDEGSGDDEQ---GEIFEVEELLEICYG 303
Query: 406 DPNKTKKPGVYFK 418
DP + KPG+YFK
Sbjct: 304 DPKEINKPGLYFK 316
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 224/381 (58%), Gaps = 37/381 (9%)
Query: 57 VKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEE 116
+ T + DSD FVG PV DEA +R+P RY S KG S + +E+
Sbjct: 220 ARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRY--SRKGSD--------SLLKQEPDED 269
Query: 117 EVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYR 176
E ++ARCHY A+VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R
Sbjct: 270 EEMKARCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFR 329
Query: 177 AEDTVIKDLAYLV-----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
DTVI V + KRVFLS ++DN + CIVSK KIA V NM +A+ I
Sbjct: 330 TADTVISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAIS 389
Query: 232 PCDLYYDMKYTLPHLTFSNINNESNRR-DSDASSTISSETGSNSPIGE------------ 278
CDLYYDM Y++ + TF+N+ +++ S+A+S IS + NS G+
Sbjct: 390 DCDLYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQ 449
Query: 279 -PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
SLLDLYSGCGAMSTGLC+G + SG+ L TRWA+DIN +AC LK NHP ++VRNE
Sbjct: 450 TETASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEK 509
Query: 338 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVE 397
+DFL+L+++W LC+ + ++ D + E S++ D ++ E +P + F+VE
Sbjct: 510 TEDFLALIQQWDALCRKYVVHKNDTL-EPSIDMPLNDADDVNEP-------LPEDIFDVE 561
Query: 398 SLTAVCYGDPNKTKKPGVYFK 418
L +CYGDP+ T K G++FK
Sbjct: 562 ELLEICYGDPSNTGKNGLWFK 582
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 224/381 (58%), Gaps = 37/381 (9%)
Query: 57 VKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEE 116
+ T + DSD FVG PV DEA +R+P RY S KG S + +E+
Sbjct: 220 ARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRY--SRKGSD--------SLLKQEPDED 269
Query: 117 EVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYR 176
E ++ARCHY A+VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R
Sbjct: 270 EEMKARCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFR 329
Query: 177 AEDTVIKDLAYLV-----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
DTVI V + KRVFLS ++DN + CIVSK KIA V NM +A+ I
Sbjct: 330 TADTVISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAIS 389
Query: 232 PCDLYYDMKYTLPHLTFSNINNESNRR-DSDASSTISSETGSNSPIGE------------ 278
CDLYYDM Y++ + TF+N+ +++ S+A+S IS + NS G+
Sbjct: 390 DCDLYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVSPYSEQ 449
Query: 279 -PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
SLLDLYSGCGAMSTGLC+G + SG+ L TRWA+DIN +AC SLK NHP ++VRNE
Sbjct: 450 TETASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACASLKHNHPYSQVRNEK 509
Query: 338 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVE 397
+DFL+L+++W LC+ + ++ + + E ++ D ++ E +P + F+VE
Sbjct: 510 TEDFLALIQQWDALCRKYVVHKNNTL-EPGIDMPLNDADDVNEP-------LPEDIFDVE 561
Query: 398 SLTAVCYGDPNKTKKPGVYFK 418
L +CYGDP+ T K G++FK
Sbjct: 562 ELLEICYGDPSNTGKNGLWFK 582
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 229/389 (58%), Gaps = 30/389 (7%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAG 105
VKEEPV+ V +K + F+ P+ EA +PDRYK + +K A
Sbjct: 32 VKEEPVKFVEEGEKYVAR--------FLDEPIPESEAKSTWPDRYKPITV----QKPKAP 79
Query: 106 VSSIGALNEEEEVLQARCHYTQASVD-GCLYNLGDDAYVKAEEGAVDYIARIVELFESVD 164
+ +E++++++ARCHY +A VD +Y L DDAYV+A EG ++ +IVE+FE +
Sbjct: 80 SRNTTKDDEKDKIIRARCHYRRAIVDERQIYELNDDAYVQAGEGNQPFVCKIVEMFEGAN 139
Query: 165 GEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE 224
G+ YF ARWFYRA+DTV+K L+D KRVF S++ D N L + K I + N +
Sbjct: 140 GKLYFTARWFYRADDTVMKQFKILIDDKRVFFSEIRDTNELGLLEKKLNILMIPLNENAA 199
Query: 225 AKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET-------------- 270
CD Y DM Y LP+ TF + ++ S+ SSTISS+T
Sbjct: 200 GPIAATKTCDYYCDMNYLLPYDTFEALQQDTKMAISE-SSTISSDTDVNEGAAAISENQE 258
Query: 271 GSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
GS + E +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL NHPE
Sbjct: 259 GSQDTRVQRETTLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLGHNHPE 318
Query: 331 TKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE-QSLNFMSEDEEEEEEEENDDDSNV 389
T VRN +A+DFL LLKEW KLC +FS+ ++ E ++L+ M+ + E+ E+ + D
Sbjct: 319 THVRNMSAEDFLFLLKEWEKLCIHFSLRNSPNSEEYENLHGMT-NVEDNEDVSEESDDED 377
Query: 390 PNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
E F VE + + +G P K +K G+Y K
Sbjct: 378 DGEVFTVEKIVGISFGVPKKLQKRGLYLK 406
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 236/442 (53%), Gaps = 42/442 (9%)
Query: 5 VKRTSTQVAAEESNHSKARRRKLKLAEQQHQQQEEQREDEEVKEEPVELVTRVKK----K 60
V T +V A S KA++ ++ L + + + + E P+ VT +
Sbjct: 559 VHGTPLEVEAALSQPPKAKQPRICLGKCSLNLKSAENSSSSICELPMVTVTSAPEDKPIS 618
Query: 61 TQKNKP--------------DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVA--A 104
+NKP D FFVG V +EA KR+P RY+ + KK K +
Sbjct: 619 APENKPLDTHCTDSEMVDSMDGSYFFVGDAVPDEEAQKRWPHRYQNNHCLLKKDKRSNTQ 678
Query: 105 GVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVD 164
VS++G + VL +CHY +AS+ G +GD A++K EG YI R++E FE+
Sbjct: 679 TVSNVG-----KAVLDVKCHYLEASICGSTLCIGDCAFIKGLEGKPHYIGRLLEFFETTA 733
Query: 165 GEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE 224
E YF +WF+RAEDTV++D A D +R+F SD++DDN L+CIVSK I V+ + L
Sbjct: 734 DEYYFTVQWFFRAEDTVMEDQAQSHDPRRLFYSDLKDDNLLDCIVSKVTIMPVSPS--LN 791
Query: 225 AKQKNIPPCDLYYDMKYTLPHLTFSNINN-------ESNRRDSDASSTISSETGSNSPIG 277
K + IP YYDMKY+L + TFS + S+ S+ I SP
Sbjct: 792 EKPRLIPSFHYYYDMKYSLDYSTFSTMEMGDPNDTLHSHYTSSNNVKRIDFTEKQKSPTS 851
Query: 278 EP-EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE 336
E E+SLLDLY GCG MSTGLC+GA GV LV RWA+D + AC++ + NHPET+VRNE
Sbjct: 852 EMRELSLLDLYCGCGGMSTGLCLGARGGGVNLVARWAVDGDEVACETFRLNHPETRVRNE 911
Query: 337 AADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEV 396
DDFL LLKEW KLC+ + + KV QS + + D S EEFEV
Sbjct: 912 TTDDFLELLKEWKKLCKTY-VKPCSKVKSQS------NVPTQSSNGTPDCSTFSTEEFEV 964
Query: 397 ESLTAVCYGDPNKTKKPGVYFK 418
L +C+GDPN +K +YFK
Sbjct: 965 WKLVDICFGDPNGVRKRALYFK 986
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 214/355 (60%), Gaps = 22/355 (6%)
Query: 71 FFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGAL-NEEEEVLQARCHYTQAS 129
FF+G PV EA +R+ RY KV A NEEE V CHYTQA
Sbjct: 1023 FFIGDPVPDKEAQERWHWRYDL--------KVEHNYFFFSADDNEEEIVTNVECHYTQAK 1074
Query: 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
+DG ++NLGD A++K E G ++ RI+E F++ +GE YF+ +WFYRAEDTV+K+ A
Sbjct: 1075 LDGTIFNLGDCAHIKGE-GEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASH 1133
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFS 249
D+KR+F S + +DN L+CI+SK + E+ + L K +IPP D YYDMKY + + TF
Sbjct: 1134 DKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSL--KLDSIPPFDYYYDMKYNVEYSTFH 1191
Query: 250 NINNESNRRD------SDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASL 303
+ + + S A++T + P + E++LLDLYSGCG MSTGLC+GA L
Sbjct: 1192 TLLSGKISPNCIETPLSVANTTFPEDMDGCKP-DKAELALLDLYSGCGGMSTGLCLGAKL 1250
Query: 304 SGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKV 363
S V LVT+WA+D + AC+SLK NHPET+VRNE A+DFL LLKEW LC+ +++ ++
Sbjct: 1251 SCVNLVTKWALDFDKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERK 1310
Query: 364 PEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
+ N + + + D V +E E+ L +CYGDP++T K G+ FK
Sbjct: 1311 SQSRSNVL---RTSKSNINSPHDIKVATDELEILKLVDICYGDPSETGKRGLKFK 1362
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/402 (39%), Positives = 225/402 (55%), Gaps = 19/402 (4%)
Query: 18 NHSKARRRKLKLAEQQHQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSDLFFVGPPV 77
N + R K +E +H E E + KK +K S FFVG PV
Sbjct: 422 NQTSKFARGTKASETRHSSSELLESGTGHPLEKTNNSSGADKKNNVSKMAS--FFVGDPV 479
Query: 78 SVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNL 137
DEA +R+ RY+ ++ K++KV +E+ V+ CHYTQA++ +++L
Sbjct: 480 PADEAQQRWKWRYEMKNQITKEQKVTESDD-----DEDMIVVNVDCHYTQANIGNTVFSL 534
Query: 138 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
GD Y+K E G +++ I+E F++ DG+ YF+ +WFYR EDTVI++ D +R+F S
Sbjct: 535 GDCVYIKGE-GEKNHVGTIIEFFKTTDGDNYFRGQWFYRVEDTVIQEEGAFHDPRRLFYS 593
Query: 198 DVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNI-NNESN 256
V +DNPL+CIVSK I V + K + D YYDM+Y + + TF + N ES
Sbjct: 594 TVMNDNPLDCIVSKVNIKRVKPRVG--QKSNSASSYDFYYDMEYCVEYSTFRTLKNGESP 651
Query: 257 RRDSDASS-TISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAID 315
D T +S T N P + E+ LLDL+SGCG MSTGLC+GA LS + L++RWA+D
Sbjct: 652 TNCIDTPHVTSTSNTFENMP-KKAELELLDLFSGCGGMSTGLCLGAKLSSIDLISRWAVD 710
Query: 316 INPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDE 375
+ AC+SL+ NHPET VRNE A+DFL LLKEW KLC+ + K E + +
Sbjct: 711 SHMSACESLRLNHPETHVRNETAEDFLDLLKEWEKLCRRY------KANESEGSHQLRSK 764
Query: 376 EEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYF 417
+ +DD+ P EFEV SL +CYGDP +T K G+ F
Sbjct: 765 ANDYLTSSDDEDEFPTSEFEVSSLVDICYGDPTRTGKRGLMF 806
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 211/353 (59%), Gaps = 39/353 (11%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
FVG P DEA ++ RY+ ++ +EE L+ARCHY A+VD
Sbjct: 130 FVGEPFPADEARSKWSQRYQRAAPRRP---------------DEEPELKARCHYRSANVD 174
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDR 191
G +Y LGDD YVKA E DYI RI E FE D YF RWF+R EDTVI ++ D
Sbjct: 175 GTVYALGDDVYVKAAENEADYIGRITEFFEGTDRHCYFACRWFFRPEDTVISTAKFVDDH 234
Query: 192 ----KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP--PCDLYYDMKYTLPH 245
KRVFLS+ +DN L+CI+ K KI V NMD E K + + +LYYDM Y + +
Sbjct: 235 THDPKRVFLSEETNDNVLDCIIKKVKIIHVDPNMDPEGKAQLVADSEAELYYDMSYAVAY 294
Query: 246 LTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSG 305
TF+NI +++N +S SS E G+ P+ +LLDLYSGCG MSTGLC+GA+L+G
Sbjct: 295 STFANIPSDTNE-NSGISSDADLEAGT-PPVRT--AALLDLYSGCGGMSTGLCLGAALAG 350
Query: 306 VKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE 365
+KL TRWA+D+N ACKSLK+NHP T+VRNE A++FL+LLKEWA LC +
Sbjct: 351 LKLETRWAVDLNSFACKSLKYNHPGTEVRNEKAEEFLALLKEWAILCDTY---------- 400
Query: 366 QSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
++ + + + E+E +DD + +EF VE L +CYG + K G+YFK
Sbjct: 401 --VHVNNSESDSPIEDEEEDDEPLAKDEFVVEKLLEICYGGSGRGK--GIYFK 449
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like
[Brachypodium distachyon]
Length = 782
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 213/356 (59%), Gaps = 21/356 (5%)
Query: 71 FFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASV 130
FFVG V +EA +R+P RYK + +K K + A N+ VL +CHY QASV
Sbjct: 5 FFVGEAVLEEEAKQRWPHRYKKNHHFVEKDKRSGNQPFANAGND---VLDVKCHYLQASV 61
Query: 131 DGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVD 190
G +GD A+VK EG +YI+RI+E FE+V GE Y + +WF+RAEDTV++D A D
Sbjct: 62 SGSTLCVGDCAFVKGPEGRPNYISRILEFFETVAGECYCRVQWFFRAEDTVMEDQAQSND 121
Query: 191 RKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSN 250
+R+F SD++DD L+CIVSK I +V +D E+ K+IP YYDMKY+L + TFS
Sbjct: 122 PRRLFYSDLQDDYSLDCIVSKLTIVQVPPCVDKES--KSIPSSQYYYDMKYSLDYSTFST 179
Query: 251 INNESNR---RDSDASST----ISSETGSNSPI-GEPEMSLLDLYSGCGAMSTGLCIGAS 302
+ E + S ASS + SP+ + ++SLLDLY GCG MSTGLC+GA
Sbjct: 180 LEMEDTNAILQSSHASSIEMKKVDFSKKQKSPVPNKKDLSLLDLYCGCGGMSTGLCLGAH 239
Query: 303 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 362
+GV LV +WA+D + AC+S + NHPET+VRNE +DFL LLKEW KLC+ K
Sbjct: 240 GAGVNLVKKWAVDDDLVACESYRLNHPETRVRNETTNDFLLLLKEWQKLCK--------K 291
Query: 363 VPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
EQS D E E DDS P EE EV L +C+GDPN + ++FK
Sbjct: 292 YVEQSEVKDHADGLTETINEIPDDSVDPTEELEVWKLVDICFGDPNGIENHCLHFK 347
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 222/391 (56%), Gaps = 36/391 (9%)
Query: 35 QQQEEQREDEEVKEEPVELVTRVKKKTQ-KNKP--DSDLFFVGPPVSVDEALKRYPDRYK 91
++ E E+ EEP RV + + +N+ D D FVG P EA ++P RY+
Sbjct: 89 EEDESAASGEQQPEEPAAARKRVAQPIRARNQAGGDKDHGFVGAPFPAGEARSKWPQRYQ 148
Query: 92 YSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD 151
+ +++ +ARCHY A VD +YNLGDD YV A E
Sbjct: 149 PTKPRRPEEEEEDP--------------KARCHYRSAKVDEAIYNLGDDVYVMAGENEPH 194
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNC 207
YI RI E FE +D + YF RWF+R EDTVI ++ D KRVFLS+ ++DN L C
Sbjct: 195 YIGRITEFFEGIDKKCYFTCRWFFRPEDTVISTAKFVNDHTHDPKRVFLSEEKNDNVLEC 254
Query: 208 IVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTIS 267
IV K I V NMD EAK + + DLYYDM Y++ + TF+NI + N ++ +S IS
Sbjct: 255 IVLKVNIVHVDPNMDSEAKAQLVAESDLYYDMSYSVAYSTFANITS-GNFCYTNDNSGIS 313
Query: 268 SETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN 327
S+ S + LLDLYSGCG MSTGLC+G++L+G+KL TRWA+D+N ACKSLK+N
Sbjct: 314 SDVDSEAASPVRTAVLLDLYSGCGGMSTGLCLGSALAGLKLETRWAVDLNSFACKSLKYN 373
Query: 328 HPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDS 387
HP T+VRNE A+DFL+LLKEWA LC + ++ + D E+E +DD
Sbjct: 374 HPGTEVRNEKAEDFLALLKEWAILCDTY------------VHGNNSDPASPSEDEEEDDE 421
Query: 388 NVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
+ +EF VE L +CYG + K +YFK
Sbjct: 422 PLGKDEFVVEKLLEICYGGSGREK--AIYFK 450
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 198/306 (64%), Gaps = 6/306 (1%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 172
+E++ V CHYTQA+++G + NLGD YVK E GA ++I I+E F++ D E YF+ +
Sbjct: 6 DEDKVVWNVECHYTQANIEGRIINLGDCVYVKGE-GAKNHIGSILEFFKTTDREDYFRVQ 64
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
WFYRAEDTV+K+ A D KR+F S V +DNP++CI+SK + +++ + L K + P
Sbjct: 65 WFYRAEDTVMKEAADFHDNKRLFYSTVMNDNPIDCIISKVTVVQISPRVHL--KFHSTPA 122
Query: 233 CDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGA 292
D Y+DM+Y + + TF + N + + IS E S + +++LLDL+SGCG
Sbjct: 123 SDFYFDMEYCVDYSTFRTLLTGKNLNSTPGTDDISMENMSTCGSYKAKLTLLDLFSGCGG 182
Query: 293 MSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLC 352
MSTGLC+GA +S V LVTRWA+D + AC+SLK NHPET VRNEAA+DFL LLKEW KLC
Sbjct: 183 MSTGLCLGAKVSCVDLVTRWALDSDESACQSLKLNHPETHVRNEAAEDFLELLKEWQKLC 242
Query: 353 QYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKK 412
+ +++ D + +S + S ++ + NDDD + + E+EV L +CYG +K K
Sbjct: 243 KRYAVNDVGRT-HKSRSMASSMSKQNKNSSNDDD--IASGEYEVARLVDICYGKTDKRGK 299
Query: 413 PGVYFK 418
G+ FK
Sbjct: 300 RGLKFK 305
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/375 (40%), Positives = 228/375 (60%), Gaps = 30/375 (8%)
Query: 54 VTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALN 113
VTR + Q + S FF+G P+S +EA +R+ R++Y K K K S G +
Sbjct: 507 VTRTAVQEQNKR--SICFFIGEPLSCEEAQERW--RWRYELKERKSK-------SRGQQS 555
Query: 114 EEEE---VLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFK 170
E++E V CHY+QA VDG ++LGD AY+K EE ++ +IVE F++ DGE YF+
Sbjct: 556 EDDEDKIVANVECHYSQAKVDGHTFSLGDFAYIKGEEEET-HVGQIVEFFKTTDGESYFR 614
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNI 230
+WFYRA DT+++ A D++R+F S V +DNP++C++SK + +V+ + L+ N
Sbjct: 615 VQWFYRATDTIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKP---NS 671
Query: 231 PPCDLYYDMKYTLPHLTFSNINNESNRRD-----SDASSTISSETGSNSPIGEPEMSLLD 285
D Y+DM+Y + + TF + N + +D T S+E+ E+ +LD
Sbjct: 672 IKSDYYFDMEYCVEYSTFQTLRNPKTSENKLECCADVVPTESTESILKKKSFSGELPVLD 731
Query: 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
LYSGCG MSTGL +GA +SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LL
Sbjct: 732 LYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLL 791
Query: 346 KEWAKLCQYFSIYDTDKVPE--QSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVC 403
KEW KLC+ + +++ D+ + +S+N +E + D + +EE+EVE L +C
Sbjct: 792 KEWDKLCKRY-VFNNDQRTDTLRSVN----STKETSGSSSSSDDDSDSEEYEVEKLVDIC 846
Query: 404 YGDPNKTKKPGVYFK 418
+GD +KT K G+ FK
Sbjct: 847 FGDHDKTGKNGLKFK 861
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine
max]
Length = 1143
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 214/365 (58%), Gaps = 21/365 (5%)
Query: 67 DSDLF--FVGPPVSVDEALKRYPDRY--KYSSKGHKKKKVAAGVSSIGALNEEEEVLQAR 122
DS+ F F+G P+ DEA KR+ RY K KK + I E+E + +
Sbjct: 306 DSENFPSFIGDPIPDDEAQKRWGWRYELKVVDLILSDKKCKDNMFKINEGEEDEIIANVK 365
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
CHY QA + C+++LGD A+VK E G ++ +I+E F++ DG+ YF+ +WFYR +DTV+
Sbjct: 366 CHYAQAEIGNCIFSLGDCAFVKGE-GEEKHVGKIIEFFQTTDGQNYFRVQWFYRIQDTVV 424
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYT 242
+D D++RVF S + +DN ++CI+ KA + + + L K +I D YYDM+Y
Sbjct: 425 QDEGGFHDKRRVFYSAIMNDNLIDCIMGKANVTHITPRVGL--KLASISSSDFYYDMEYC 482
Query: 243 LPHLTFSNINNESNRRDSDASSTISS---------ETGSNSPIGEPEMSLLDLYSGCGAM 293
+ + TF +NN + S + S E+ S + + E++LLDLYSGCG M
Sbjct: 483 VDYSTFRTLNNPVKTNELSPPSVLESLSTDASTVTESQPCSELNKTELALLDLYSGCGGM 542
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQ 353
STGLC+GA + V LVTRWA+D + A +SLK NH +T VRNE+A+DFL LLK W KLC+
Sbjct: 543 STGLCLGAKTASVNLVTRWAVDSDRSAGESLKLNHSDTHVRNESAEDFLELLKAWEKLCK 602
Query: 354 YFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKP 413
+++ T E+ L F S + ++ N + + + E EV L +C+GDPN+T K
Sbjct: 603 RYNVSST----ERKLPFRS-NSSGAKKRGNSEVHEISDGELEVSKLVDICFGDPNETGKR 657
Query: 414 GVYFK 418
G+Y K
Sbjct: 658 GLYLK 662
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 229/375 (61%), Gaps = 30/375 (8%)
Query: 54 VTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALN 113
VTR + Q + S FF+G P+S +EA +R+ R++Y K K K S G +
Sbjct: 465 VTRTAVQEQNKR--SICFFIGEPISCEEAQERW--RWRYDLKERKSK-------SRGQQS 513
Query: 114 EEEE---VLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFK 170
E++E V CHY QA VDG ++LGD A +K EE ++ +I+E F++ D E YF+
Sbjct: 514 EDDEDKIVANVECHYLQAKVDGHTFSLGDFACIKGEEEET-HVGKILEFFKTTDEESYFR 572
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNI 230
+WFYRA DTV+K A D+KR+F S V +DNP++C++SK + +V+ L+ N
Sbjct: 573 VQWFYRATDTVMKQQATNHDKKRLFYSTVMNDNPVDCLISKVTVLQVSPMAGLKP---NS 629
Query: 231 PPCDLYYDMKYTLPHLTFSNINNESNRRD-----SDASSTISSETGSNSPIGEPEMSLLD 285
D Y+DM+Y + + TF + N + + +D T S+E+ I E+ +LD
Sbjct: 630 IKSDYYFDMEYCVEYSTFQTLKNPKSSENKLECCADVVPTESTESILKKKIFSGELPVLD 689
Query: 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
LYSGCG MSTGL +GA +SGV +VT+WA+D N AC+SLK NHP T+VRN+AA DFL LL
Sbjct: 690 LYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNMAACESLKLNHPNTQVRNDAAGDFLQLL 749
Query: 346 KEWAKLCQYFSIYDTDKVPE--QSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVC 403
KEW KLC+ + +++ D+ + +S+N + +E E + D + +EE+EVE L +C
Sbjct: 750 KEWDKLCKRY-VFNNDQRTDTLRSVNSI----KETSESSSSRDDDSDSEEYEVEKLVDIC 804
Query: 404 YGDPNKTKKPGVYFK 418
+GDP+KT K G+ FK
Sbjct: 805 FGDPDKTGKNGLKFK 819
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 198/365 (54%), Gaps = 39/365 (10%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
D FFVG V DEA K++P RY+ + + KK K + ++
Sbjct: 362 DGSCFFVGDAVPDDEARKQWPHRYEINDQIMKKDKRTS----------------SQTFAK 405
Query: 127 QASVDGC---LYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+V C +Y + EG +YI R++E FE+ GE YF+ +WF+ AEDTVI
Sbjct: 406 LVTVSFCVVFMYVYLQMLDFRGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIG 465
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTL 243
+ A D +R+F SD+ DDN L+CIVSK I +V ++D K K++P D YYDMKY++
Sbjct: 466 EQAQSHDPRRLFYSDLTDDNLLDCIVSKVTIVQVPPSVD--GKSKSVPSSDYYYDMKYSI 523
Query: 244 PHLTFSNINNESN---------RRDSDASSTISSETGSNSPIGEP-EMSLLDLYSGCGAM 293
+ TFS I E R +D I SP+ E E+SLLDLY GCG M
Sbjct: 524 DYSTFSTIEMEDTDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGM 583
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQ 353
STGLC+GA GV L RWAID + AC+S + NHPET+VRNE DDFL LLKEW KLC+
Sbjct: 584 STGLCLGARGGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCK 643
Query: 354 YFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKP 413
+ + K D E E D S VP EEFEV L +C+GDPNK K
Sbjct: 644 TYVKHSRTKA--------CVDSTTESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKH 695
Query: 414 GVYFK 418
G+YFK
Sbjct: 696 GLYFK 700
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 196/363 (53%), Gaps = 35/363 (9%)
Query: 67 DSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYT 126
D FFVG V DEA K++P RY+ + + KK K + Q
Sbjct: 539 DGSCFFVGDAVPDDEARKQWPHRYEINDQIMKKDKRTSS--------------QTFAKLV 584
Query: 127 QASVDGC-LYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDL 185
S G +Y + EG +YI R++E FE+ GE YF+ +WF+ AEDTVI +
Sbjct: 585 TVSFCGVFMYVYLQMLDFRGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQ 644
Query: 186 AYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
A D +R+F SD+ DDN L+CIVSK I +V ++D K K++P D YYDMKY++ +
Sbjct: 645 AQSHDPRRLFYSDLTDDNLLDCIVSKVTIVQVPPSVD--GKSKSVPSSDYYYDMKYSIDY 702
Query: 246 LTFSNINNESN---------RRDSDASSTISSETGSNSPIGEP-EMSLLDLYSGCGAMST 295
TFS I E R +D I SP+ E E+SLLDLY GCG MST
Sbjct: 703 STFSTIEMEDTDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMST 762
Query: 296 GLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYF 355
GLC+GA GV L RWAID + AC+S + NHPET+VRNE DDFL LLKEW KLC+ +
Sbjct: 763 GLCLGARGGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTY 822
Query: 356 SIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGV 415
+ K D E E D S VP EEFEV L +C+GDPNK K G+
Sbjct: 823 VKHSRTKA--------CVDSTTESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGL 874
Query: 416 YFK 418
YFK
Sbjct: 875 YFK 877
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/311 (46%), Positives = 202/311 (64%), Gaps = 27/311 (8%)
Query: 119 LQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAE 178
L+A HY +A V+G +Y+L DD YV+A+ G + IA+I+ELFE VDGE YF+A+ FYRAE
Sbjct: 16 LEATSHYDKALVNGVVYSLNDDIYVQAK-GEPNRIAKIIELFEGVDGEGYFRAQLFYRAE 74
Query: 179 DTVIKDLA--YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
DTVI+DLA YL +++RVFLS+VE D LN IVSK I ++ A + LE ++++IP CD +
Sbjct: 75 DTVIQDLAGEYLQEKRRVFLSNVEADYSLNLIVSKVHIIKLPAKILLENEERDIPACDFF 134
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDM+Y L HLTFS+++NE + + + S+ + S E +LDLYSGCGAMSTG
Sbjct: 135 YDMRYNLEHLTFSSVDNEISNVEGNDSNNVGS--------CNKEKYMLDLYSGCGAMSTG 186
Query: 297 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN--EAADDFLSLLKEWAKLCQY 354
LC+GASLSGV L+T+WA+D N AC+SLK NHPETK R E A+ + K K+
Sbjct: 187 LCMGASLSGVNLITKWAVDNNSFACESLKLNHPETKCRRIFEIAE---GMEKAMPKV--- 240
Query: 355 FSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDP------- 407
F+ T+ + E +F ++E E E D + +EFEV+ + ++CYGDP
Sbjct: 241 FTSPKTEPL-ELDSDFEDDNESENNVEGESDGYEMSPDEFEVDEVLSICYGDPKKANASV 299
Query: 408 NKTKKPGVYFK 418
K K +YFK
Sbjct: 300 KKVKPSALYFK 310
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 209/362 (57%), Gaps = 50/362 (13%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+G P+ +EA K+YP RY G K ++ S N++E+++QARCHYT+A VD
Sbjct: 233 FIGKPMEDEEARKQYPKRYA----GEKPQRNGQNNS-----NDDEDIIQARCHYTKALVD 283
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDR 191
G Y+L DDA+V+ E YI +IVE+FE++ G YF A+W+YR+ DTVIK A V
Sbjct: 284 GISYDLYDDAHVQGETKEEPYICKIVEMFEAIGGLLYFTAQWYYRSRDTVIKHCA-TVAC 342
Query: 192 KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNI 251
RVF SDV DDNPL+C+V K I + N+D + K K+IP C+ Y D KY LP+ TF N+
Sbjct: 343 GRVFFSDVRDDNPLDCLVEKLHIVRLTLNVDEDVKSKSIPVCNYYCDTKYLLPYSTFVNL 402
Query: 252 NNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTR 311
E+ + SD STIS E + LD +S G+C + R
Sbjct: 403 PTENMQSGSD-DSTISVE----------DDVCLDSEVD-SKLSNGVCAKSE--------R 442
Query: 312 WAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFM 371
WA+D N ACKSL+ NHPET+VRNEAA+DFL++LKEW KLC + +TD + E M
Sbjct: 443 WAVDYNEXACKSLEQNHPETEVRNEAAEDFLTMLKEWRKLCMCLKLVETDNLEEDVEKSM 502
Query: 372 SE---------------DEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVY 416
E +EE+ ENDD +E FEV+ + VC+GDP K +K G+Y
Sbjct: 503 LEFFRKEDDEVEXEGEEEEEDVSGNENDD-----SEVFEVDCVVGVCFGDPKKNEKKGIY 557
Query: 417 FK 418
FK
Sbjct: 558 FK 559
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 184/296 (62%), Gaps = 24/296 (8%)
Query: 127 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 186
+A VD Y LGDD YV A E DYI RI E FE VD YF RWF+R EDTVI
Sbjct: 11 EAKVDDVDYTLGDDVYVMAGENEADYIGRITEFFEGVDKTNYFTCRWFFRPEDTVISRAK 70
Query: 187 YLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYT 242
++ D KRVFLS+ ++DNPL+CI+SK KI V N D K K + DLYYDM Y+
Sbjct: 71 FVNDHTHDPKRVFLSEEKNDNPLDCIISKVKIIHVDPNTDSVTKAKLVAGTDLYYDMSYS 130
Query: 243 LPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGAS 302
+ + TF+NI + D+ +S IS++ S + SLLDLYSGCG MSTGLC+G++
Sbjct: 131 VAYSTFANIPS-----DTTENSGISTDADSENGTPVKTASLLDLYSGCGGMSTGLCLGSA 185
Query: 303 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 362
L+G+KL T+WA+D+N ACKSLK+NHP+T+VRNE A+DFL+LLKEW LC + ++ D
Sbjct: 186 LAGLKLETKWAVDLNSFACKSLKYNHPKTEVRNEKAEDFLALLKEWVILCDKY-VHGNDS 244
Query: 363 VPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
+ E EE +DD + +EF V+ L +CYG +K G+YFK
Sbjct: 245 ------------DAAEPVEEEEDDEPLGKDEFVVQKLLGICYG--GSGRKNGIYFK 286
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 186/308 (60%), Gaps = 27/308 (8%)
Query: 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R DTVI V
Sbjct: 1 VDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKLLKV 60
Query: 190 -----DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLP 244
+ KRVFLS ++DN + CIVSK KIA V NM +A+ I CDLYYDM Y++
Sbjct: 61 HDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSYSVA 120
Query: 245 HLTFSNINNESN-RRDSDASSTISSETGSNSPIGE-------------PEMSLLDLYSGC 290
+ TF+N+ +++ S+A+S IS + NS G+ SLLDLYSGC
Sbjct: 121 YSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTETASLLDLYSGC 180
Query: 291 GAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAK 350
GAMSTGLC+G + SG+ L TRWA+DIN +AC LK NHP ++VRNE +DFL+L+++W
Sbjct: 181 GAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQWDA 240
Query: 351 LCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT 410
LC+ + ++ D + E S++ D ++ E +P + F+VE L +CYGDP+ T
Sbjct: 241 LCRKYVVHKNDTL-EPSIDMPLNDADDVNEP-------LPEDIFDVEELLEICYGDPSNT 292
Query: 411 KKPGVYFK 418
K G++FK
Sbjct: 293 GKNGLWFK 300
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 181/285 (63%), Gaps = 19/285 (6%)
Query: 147 EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLN 206
EG ++ RIVE F++ DGE YF+ +WFYRAEDTVIK+ A D+KR+F S + +DNP++
Sbjct: 18 EGGQKHVGRIVEFFKTTDGEDYFRVQWFYRAEDTVIKEEAGFHDKKRLFYSTIMNDNPID 77
Query: 207 CIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSN--INNESNRRDSDASS 264
CI+SK +I ++ + + + +I D Y+DM+Y + + +F I RD+ +S
Sbjct: 78 CIISKVRIVQLPSMI---GSKSSIRSTDFYFDMEYNVDYSSFRTLLIGKHFCLRDNSSSP 134
Query: 265 TIS---SETGSNSPI--------GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWA 313
+ S TG N+ + + E++LLDL+SGCG MSTGLC+GA +S V LVTRWA
Sbjct: 135 NVVEAVSTTGGNTSLENMRSSESNKAELALLDLFSGCGGMSTGLCLGAKVSCVDLVTRWA 194
Query: 314 IDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSE 373
+D N AC+SLK NHPET VRNEAA+DFL LLK W KLC+ +++ D K +QS + S
Sbjct: 195 LDSNKSACESLKLNHPETNVRNEAAEDFLELLKVWEKLCKRYAVKDI-KSMQQSRSIASR 253
Query: 374 DEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
EE + +D+D + E+EV L +CYGDP+ K G+ FK
Sbjct: 254 VAEENDNSLSDND--ITPGEYEVSKLVDLCYGDPDNIGKRGLKFK 296
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 211/362 (58%), Gaps = 30/362 (8%)
Query: 45 EVKEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAA 104
EV EP+ + K + + + + P++ EA +P+RY+ KK+ V
Sbjct: 31 EVAAEPIRSRPKFKVELVVDSKKDPSWVLDEPIADSEARTTWPERYQVI---QKKEVVPL 87
Query: 105 GVSSIGALNEEEEVLQARCHYTQASVDGCL-YNLGDDAYVKAEEGAVDYIARIVELFESV 163
EEEE+ AR H+ +A +D + YNL DDA+V++EE +I +I E+FE
Sbjct: 88 PKKKKKKYVEEEEIFLARRHFRRAILDDSITYNLNDDAHVQSEEDEKPFICKIAEIFEGC 147
Query: 164 DGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDL 223
DG+ YF A+WFYRA DTVI+ ++D KRVF+SD++D N + +++K KI + +
Sbjct: 148 DGKMYFTAQWFYRACDTVIQKHEEMIDDKRVFISDIKDVNSMGVLLNKLKILMIPLTENT 207
Query: 224 EAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSL 283
E + CD Y +MKY LP T + +S I+ +++ ++
Sbjct: 208 EVTES----CDYYCNMKYRLPFSTLEALQ---------SSQCITPNQRTDA-------TM 247
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 343
LDLY GCGAMSTGLC+GA LSG+KLVT+WA+D +A +S+K+NHPET VRNE+A+DFL
Sbjct: 248 LDLYCGCGAMSTGLCMGAQLSGLKLVTKWAVDTCEYAVQSIKYNHPETVVRNESAEDFLY 307
Query: 344 LLKEWAKLCQYFSIYDT-DKVPEQSLNFMSEDEEEEEEEENDDDSNVPN--EEFEVESLT 400
LLKEW KLC +FS+ ++ D ++L MS EE ++ D+S+V + E FEVE +
Sbjct: 308 LLKEWEKLCIHFSLIESEDSEKYENLYGMS---AAEEVKDGSDESDVKDGGEVFEVEKIV 364
Query: 401 AV 402
+
Sbjct: 365 GI 366
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 173/282 (61%), Gaps = 16/282 (5%)
Query: 147 EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLN 206
EG ++ RI+E F++ +GE YF+ +WFYRAEDTV+K+ A D+KR+F S + +DN L+
Sbjct: 27 EGEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLD 86
Query: 207 CIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNI----------NNESN 256
CI+SK + E+ + L K +IPP D YYDMKY + + TF + N
Sbjct: 87 CIISKVNVLELTPRVSL--KLDSIPPFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPNCIE 144
Query: 257 RRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDI 316
S A++T + P + E++LLDLYSGCG MSTGLC+GA LS V LVT+WA+D
Sbjct: 145 TPLSVANTTFPEDMDGCKP-DKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDF 203
Query: 317 NPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEE 376
+ AC+SLK NHPET+VRNE A+DFL LLKEW LC+ +++ ++ + N +
Sbjct: 204 DKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVL---RT 260
Query: 377 EEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
+ + D V +E E+ L +CYGDP++T K G+ FK
Sbjct: 261 SKSNINSPHDIKVATDELEILKLVDICYGDPSETGKRGLKFK 302
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 192/364 (52%), Gaps = 53/364 (14%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
FVG P+ A +++P+RY S+ +K V HY +A VD
Sbjct: 158 FVGKPIPAARAKRQWPNRYDKSAGAGSQKCVE--------------------HYEEAVVD 197
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV---------- 181
G Y +GD ++ + +Y+ +++E F++ + E +F+ +WF+R DTV
Sbjct: 198 GKHYKVGDCVALELQGDDAEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCLRLCGYPDC 257
Query: 182 ------IKDLAYL-VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCD 234
I DL + +D KRVFLSD EDDN + CI+ K K++ A MD +K+K CD
Sbjct: 258 KCSLQAIGDLDDVHLDNKRVFLSDDEDDNMIECIIKKVKVS-YAPVMDAFSKKKIKQSCD 316
Query: 235 LYYDMKYTLPHLTF-----SNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSG 289
Y+DM YT TF N+ S DASS+ + S +PE+ LLDLY G
Sbjct: 317 YYFDMGYTGDFSTFYKVPSGNVFVFSTDALEDASSSFQTAVTRCSDTIKPELILLDLYCG 376
Query: 290 CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 349
CGAMSTGL +GA+L GV LVT+WA+D N HAC S+K+NHPET+VRNE A+ FL LLKEW
Sbjct: 377 CGAMSTGLSMGAALGGVNLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLLLLKEWQ 436
Query: 350 KLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNK 409
KLC + + V + + N S D +E D E+EV+ + + K
Sbjct: 437 KLCTKYEGH----VADDNSNASSPDSNTLGADEYAAD------EYEVQQVVDIRMAGIQK 486
Query: 410 TKKP 413
KKP
Sbjct: 487 PKKP 490
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 197/364 (54%), Gaps = 49/364 (13%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARC--HYTQAS 129
FVG P+ A +++P+RY KV A S GA ++ +C HY +A
Sbjct: 1 FVGKPIPAARAKRQWPNRYD---------KVKAFKQSAGAGSQ-------KCVEHYEEAV 44
Query: 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV-------- 181
VDG Y +GD ++ + +Y+ +++E F++ + E +F+ +WF+R DTV
Sbjct: 45 VDGKHYKVGDCVALELQGDDTEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCLRLCVYP 104
Query: 182 --------IKDLAYL-VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
I DL + +D KRVFLSD EDDN + CI+ K K++ A MD +K+K
Sbjct: 105 DCKCSLQAIGDLDDVHLDNKRVFLSDDEDDNMIECIIKKVKVS-YAPVMDAFSKKKIKQN 163
Query: 233 CDLYYDMKYTLPHLTFSNI---NNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSG 289
CD Y+DM YT TF + N +ASS+ + S +PE+ LLDLY G
Sbjct: 164 CDYYFDMGYTGDFSTFYKVPSGNVFVFDALEEASSSFQTAVTRCSDTIKPELILLDLYCG 223
Query: 290 CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 349
CGAMSTGL +GA+L GVKLVT+WA+D N HAC S+K+NHPET+VRNE A+ FL LLKEW
Sbjct: 224 CGAMSTGLSMGAALGGVKLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLLLLKEWQ 283
Query: 350 KLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNK 409
KLC + + V + + N S D +E D E+EV+ + + K
Sbjct: 284 KLCTKYEGH----VADDNSNASSPDSTTLGADEYAAD------EYEVQQVVDIRMAGIQK 333
Query: 410 TKKP 413
KKP
Sbjct: 334 PKKP 337
>gi|224076026|ref|XP_002304879.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
gi|222842311|gb|EEE79858.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
Length = 363
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 160/274 (58%), Gaps = 43/274 (15%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
FVG + EA K++P RY ++++ARCHYT+A VD
Sbjct: 109 FVGAQIPGAEARKKWPHRY------------------------ANKIVKARCHYTRAEVD 144
Query: 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDR 191
+Y+L DA+V+A +G DYI RI E+FESVD YF +W+YR+ T+IKD Y+ D
Sbjct: 145 RIIYDLYYDAHVQASDGEPDYICRISEMFESVDRTLYFTTQWYYRSTVTIIKD-KYISDP 203
Query: 192 KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNI 251
K VF S++ +DNPL C+ K I +A N+D E ++ CD Y DM Y LP+ TF +
Sbjct: 204 KCVFFSEIRNDNPLECLTWKLNIVRLALNVDPENRRARSSGCDFYCDMLYLLPYSTFVRL 263
Query: 252 NNESNRRDSDASSTISS------------ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCI 299
E+N + SSTIS+ E S + E++LLDLYSGCGAMSTGLC+
Sbjct: 264 PTENNTTGPE-SSTISNDIDAAGVKSECDEVCETSGSSKSEVALLDLYSGCGAMSTGLCL 322
Query: 300 GASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
G+ LVT+WA+D+N +AC+SL+ NHPET+V
Sbjct: 323 -----GLNLVTKWAVDLNINACQSLRLNHPETQV 351
>gi|357490109|ref|XP_003615342.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516677|gb|AES98300.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 800
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 157/270 (58%), Gaps = 32/270 (11%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVD 131
F+ P+ + EA R+P RY K+KK S+ ++E+EVLQARCHYT+A VD
Sbjct: 123 FLRDPILLKEAKLRWPKRYL-----EKEKKKTRSRSN----SDEDEVLQARCHYTEAKVD 173
Query: 132 G-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVD 190
G +Y L DDA+VK E+ +I +I+E+FE+VDGE YF
Sbjct: 174 GGVIYKLYDDAHVKGEKDDYHFICKIMEMFEAVDGELYFTP------------------- 214
Query: 191 RKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSN 250
KRVFLS+V+DDNPL+C+V K IA + D +A IPPC Y D Y L S
Sbjct: 215 -KRVFLSEVQDDNPLDCLVEKLTIALLELKKDFDATNDVIPPCKYYCDTLYLLE--ISST 271
Query: 251 INNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVT 310
I+NE+ + S+ T N +PE+ LLDLYSGCG MSTGLC LSG +VT
Sbjct: 272 ISNETEVNAKSEVDSKSAITDINDDKKKPELKLLDLYSGCGGMSTGLCQWRILSGSDIVT 331
Query: 311 RWAIDINPHACKSLKFNHPETKVRNEAADD 340
+W +D+N AC+SLK NHPET+VRNE DD
Sbjct: 332 KWVVDLNKDACQSLKLNHPETEVRNEEEDD 361
>gi|2865418|gb|AAC02661.1| chromomethylase [Arabidopsis thaliana]
Length = 248
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 161/248 (64%), Gaps = 7/248 (2%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV 118
K+ ++ +P+SDL F G P+SV E+ R+P RY+ SK K + ++ G E+EE+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQ--SKKTKLQAPTKKPANKGGKKEDEEI 63
Query: 119 L-QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+ QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR
Sbjct: 64 IKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRP 123
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA-ANMDLEAKQKNIPPCDLY 236
EDT+I+ ++LV KRVFLS+ E+ NPL CI SK IA+V + +Q+ IPPCD Y
Sbjct: 124 EDTLIERFSHLVQPKRVFLSNDENGNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYY 183
Query: 237 YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTG 296
YDMKY +P+L F+ + + D+ +S + S + + E LLDLYSGCGAMSTG
Sbjct: 184 YDMKYEVPYLNFT---SADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTG 240
Query: 297 LCIGASLS 304
C+GAS+S
Sbjct: 241 FCMGASIS 248
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 10/235 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
HY QA V+G LY LGD +V + G D +I RI E +E D P+F A+WF+R+ DTV
Sbjct: 1 HYRQAEVEGKLYKLGDCVHVHS--GLEDPFIGRITEFYEKEDKSPWFHAQWFFRSYDTVS 58
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYT 242
++ D K+++ S+V D+N L+ IV K + +A+ + P CD Y+D Y
Sbjct: 59 RNH----DPKKIYYSEVADENELHVIVGKVSVIRIASKDRSDRSPIKTPACDYYFDKGYM 114
Query: 243 LPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGAS 302
+ TF + + S ++ + +S + SN + + LLDLY GCGAMSTG+C+G +
Sbjct: 115 FQYGTFYTLPKDLPGHGSKSTESDNSCSDSND---KKDFYLLDLYCGCGAMSTGICLGMN 171
Query: 303 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSI 357
L+G+ LVT+WA+D+N AC SLK+NHPET VRNEAA+D+L LLKEW KLC+ + +
Sbjct: 172 LAGINLVTKWAVDLNEFACMSLKYNHPETTVRNEAAEDYLQLLKEWKKLCEKYPV 226
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 148/240 (61%), Gaps = 19/240 (7%)
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFS 249
D++R+F S V +DNP++C++SK + +V+ + L+ N D Y+DM+Y + + TF
Sbjct: 579 DKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKP---NSIKSDYYFDMEYCVEYSTFQ 635
Query: 250 NINNES-------NRRD--SDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
+ N N+ + +D T S+E+ E+ +LDLYSGCG MSTGL +G
Sbjct: 636 TLRNRKCSSKTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLG 695
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A +SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+ + +++
Sbjct: 696 AKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VFNN 754
Query: 361 DKVPE--QSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D+ + +S+N +E + D + +EE+EVE L +C+GD +KT K G+ FK
Sbjct: 755 DQRTDTLRSVN----STKETSGSSSSSDDDSDSEEYEVEKLVDICFGDHDKTGKNGLKFK 810
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 149/240 (62%), Gaps = 19/240 (7%)
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFS 249
D++R+F S V +DNP++C++SK + +V+ L+ N D Y+DM+Y + + TF
Sbjct: 579 DKRRLFYSTVMNDNPVDCLISKVTVLQVSPRAGLKP---NSIKSDYYFDMEYCVEYSTFQ 635
Query: 250 NINNES-------NRRD--SDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIG 300
+ N N+ + +D T S+E+ E+ +LDLYSGCG MSTGL +G
Sbjct: 636 TLRNRKCSSKTSENKLECWADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLG 695
Query: 301 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 360
A +SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+ + +++
Sbjct: 696 AKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VFNN 754
Query: 361 DKVPE--QSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFK 418
D+ + +S+N +E E + D + +EE+EVE L +C+GDP+KT K G+ FK
Sbjct: 755 DQRTDTLRSVN----STKETSESSSSSDDDSDSEEYEVEKLVDICFGDPDKTGKNGLKFK 810
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 7/189 (3%)
Query: 63 KNKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQAR 122
K K + F VG PV +EA +R+P RY+ + K + V E+E VL +
Sbjct: 65 KGKGKAVSFLVGDPVPDEEARQRWPWRYEEKDRQSKGQSVKPNDD-----EEDELVLDVK 119
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
CHY+QA ++ C++NLGD AYVK ++G +YI RI+E F+++D E YF+ +WF+R EDTV+
Sbjct: 120 CHYSQAEIEKCIFNLGDCAYVKGKKGGRNYIGRILEFFKTMDDEDYFRVQWFFRPEDTVM 179
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYT 242
++ ++KR+F S++ +DN L+CIVSK I ++ +++L K K+I PCD YYDMKY
Sbjct: 180 EEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNL--KSKSILPCDFYYDMKYL 237
Query: 243 LPHLTFSNI 251
+ + TF +
Sbjct: 238 IDYSTFCTM 246
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 99/141 (70%), Gaps = 5/141 (3%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
+PE++LLD+YSGCG MSTGLC+GA LSGV LVTRWA+DIN AC+SLK NHPET++RNE+
Sbjct: 726 KPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNES 785
Query: 338 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVE 397
A+DFL LLKEW KLC+ + + D ++SL S + + + P+ EFEV
Sbjct: 786 AEDFLDLLKEWDKLCKRYVVKDV----QESLKVNSRVLRAAKVNSKTGNKS-PSGEFEVA 840
Query: 398 SLTAVCYGDPNKTKKPGVYFK 418
SL +CYGDP + K G+ F+
Sbjct: 841 SLIDICYGDPTNSGKHGLKFQ 861
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 113/182 (62%), Gaps = 29/182 (15%)
Query: 254 ESNRRDSDASSTISSETGSNSPIGE---------PEMSLLDLYSGCGAMSTGLCIGASLS 304
ES + + STISSE+G N + E EM +LDLYSGCGAMSTGLC+GA+++
Sbjct: 1 ESEGDGNGSDSTISSESGVNGAVNEESQSQNNKSSEMRMLDLYSGCGAMSTGLCLGANMA 60
Query: 305 GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVP 364
V LVTRWA+D+N +AC+SLK NHPET+ RNE+A+DFL LLKEW KLCQ + +
Sbjct: 61 DVNLVTRWAVDLNKYACESLKLNHPETEARNESAEDFLQLLKEWEKLCQSYGLVG----- 115
Query: 365 EQSLNFMSEDEEEEEEEENDDDSNVPNEE--------FEVESLTAVCYGDPNKTKKPGVY 416
D +++EE ++ ++ FEVE + +VCYGDP + KKPG+Y
Sbjct: 116 -------GGDSQQKEEPATIEEDEEEEDDVEVDNEEIFEVEQILSVCYGDPKEMKKPGLY 168
Query: 417 FK 418
K
Sbjct: 169 LK 170
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339
E LLDLYSGCGAMSTG C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+
Sbjct: 142 EKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAE 201
Query: 340 DFLSLLKEWAKLCQYFSIY-DTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVES 398
DFL+LLKEW +LC+ FS+ T+ V S E EE ++ +E + + EFEVE
Sbjct: 202 DFLALLKEWKRLCEKFSLVSSTEPVESISELEDEEVEENDDIDEASTGAELEPGEFEVEK 261
Query: 399 LTAVCYGDPNKT 410
+ +GDP T
Sbjct: 262 FLGIMFGDPQGT 273
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 59 KKTQKNKPDSDLFFVGPPVSVDEALKRYPDRY---KYSSKGHKKKKVAAGVSSIGALNEE 115
K+ ++ +P+SDL F G P+SV E+ R+P RY K + KK G + G E+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGYNFTGGKKED 65
Query: 116 EEVL-QARCHYTQASVDGCLYNLGDDAYV 143
EE++ QA+CH+ +A VDG L NL DD YV
Sbjct: 66 EEIIKQAKCHFDKALVDGVLINLNDDVYV 94
>gi|147801053|emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 71/83 (85%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
+PE++LLD+YSGCG MSTGLC+GA LSGV LVTRWA+DIN AC+SLK NHPET++RNE+
Sbjct: 527 KPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNES 586
Query: 338 ADDFLSLLKEWAKLCQYFSIYDT 360
A+DFL LLKEW KLC+ + + D
Sbjct: 587 AEDFLDLLKEWDKLCKRYVVKDV 609
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 11/89 (12%)
Query: 163 VDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMD 222
+D E YF+ +WF+R EDTV+++ ++KR+F S++ +DN L+CIVSK +
Sbjct: 1 MDDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNL-------- 52
Query: 223 LEAKQKNIPPCDLYYDMKYTLPHLTFSNI 251
K +I PCD YYDMKY + + TF +
Sbjct: 53 ---KSNSILPCDFYYDMKYLIDYSTFCTM 78
>gi|357477891|ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355510286|gb|AES91428.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 569
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 27/193 (13%)
Query: 133 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRK 192
C + L ++V + IVELFES D E YF A+WFYRAEDTVIKD L D+K
Sbjct: 25 CFWCLQLLSFVFIGTSLCSTFSTIVELFESHDKEYYFTAQWFYRAEDTVIKDHGNLFDKK 84
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNIN 252
R+F SDV+D+NPL+C+V K I ++ + AK+K IPP + Y+DMKYT+P+LTFSNI+
Sbjct: 85 RIFKSDVKDENPLDCLVKKVGIVRISPDAS-AAKKKKIPPSEFYFDMKYTVPYLTFSNID 143
Query: 253 NESNR----------------------RDSDASSTISSETGSNSPIGEPEM--SLLDLYS 288
N R R S+ SP G P +L +Y
Sbjct: 144 NAPARIESETSTLSSESGILNFRIWYLRGHVIFSSKERHCLDYSP-GYPTSLEIMLAIYQ 202
Query: 289 GCGAM-STGLCIG 300
CG++ S GLCIG
Sbjct: 203 PCGSIFSAGLCIG 215
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Query: 295 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 354
TGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL+EW +LC
Sbjct: 1 TGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQLCAS 60
Query: 355 FSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEE---FEVESLTAVCYGDPNKTK 411
S+ + L ED++++ + E++D+ + +E+ FEVE L +CYGDP +
Sbjct: 61 CSLLRNNTPTHSFLKVRDEDDKDDNDNEDEDEGSGDDEQGEIFEVEQLLEICYGDPKEKN 120
Query: 412 KPGVYFK 418
KPG+YFK
Sbjct: 121 KPGLYFK 127
>gi|357516637|ref|XP_003628607.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522629|gb|AET03083.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 171
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 38/172 (22%)
Query: 138 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
G + V+ EG + ++ +E+FESVDGE +F+A+W+YRA+DT L+D KRVF S
Sbjct: 33 GIKSRVRKAEGII-FVK--LEMFESVDGELFFRAQWYYRAKDT-------LIDPKRVFYS 82
Query: 198 DVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNR 257
+V+DDNPL+C+V K IA + N +IP + S+
Sbjct: 83 EVQDDNPLDCLVGKLNIARLELN--------DIP--------------------SETSSI 114
Query: 258 RDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLV 309
SD SE +N +PE+ LLDLYSGCGAMSTGLC G LSG K++
Sbjct: 115 VSSDIEVNGISELNTNIANTKPELKLLDLYSGCGAMSTGLCQGGILSGSKMM 166
>gi|411012957|gb|AFV99135.1| CMT-type cytosine DNA-methyltransferase 3a [Malus x domestica]
Length = 372
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 124/278 (44%), Gaps = 57/278 (20%)
Query: 72 FVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQA--- 128
F G P+ +E K+YP RY + + G+ E ++ + + A
Sbjct: 120 FSGKPMEDEETRKQYPKRYVGENYALLAISCECSMYFTGSRKERKKCYERTITKSIALCF 179
Query: 129 SVDGCLYNLGDDAYVKA---EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDL 185
D C+ G + + K E YI +IVE+FE++ G YF A+W+YR++DTVIK
Sbjct: 180 DFDPCIGAEGKEEWAKKLQRGETKEPYICKIVEMFEAIGGLLYFTAQWYYRSQDTVIKHC 239
Query: 186 AYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPH 245
A + ++D + K K+IP C+ Y D KY LP+
Sbjct: 240 ASVA----------------------------CGHVDQDVKSKSIPVCNYYCDTKYLLPY 271
Query: 246 LTFSNINN---------------ESNRRDSDASST----ISSETGS---NSPIGEPEMSL 283
TF N+ +S DS S + + SE S N + ++ L
Sbjct: 272 STFVNLQTGYCSLSTYCHDAEIMQSGSDDSTISVSDDVCLDSEVDSKLSNGVCAKSQVRL 331
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVT-RWAIDINPHA 320
LDLYSGCG MSTGLC+ A L+ V LVT R + I+ +A
Sbjct: 332 LDLYSGCGVMSTGLCLAAHLANVNLVTLRETVSIDCNA 369
>gi|357458741|ref|XP_003599651.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491293|ref|XP_003615934.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488699|gb|AES69902.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517269|gb|AES98892.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 502
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 220 NMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEP 279
++D +AK++ IPPCD Y D Y L + N + + +++ ++T E
Sbjct: 413 DLDFDAKKETIPPCDYYCDTLYLLSYSHLLNFD----QLNTNIANTEKLELKLLDL---- 464
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSL 324
YSGCG MSTGLC G LS K+VTRWA+D+N HAC L
Sbjct: 465 -------YSGCGGMSTGLCQGGMLSISKMVTRWAVDMNEHACMIL 502
>gi|357458739|ref|XP_003599650.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491291|ref|XP_003615933.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488698|gb|AES69901.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517268|gb|AES98891.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 145
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 45/177 (25%)
Query: 145 AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
E+G YI +I+E+FESVDGE +F RA I ++ VD + F + +
Sbjct: 11 GEKGGESYICKIIEMFESVDGELFF------RAYICKIIEMFKSVDGELFFRAQWQYRAK 64
Query: 205 LNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASS 264
+ I +K ++E+++ + K +F N N + ++
Sbjct: 65 -DTIKNKDILSEISSTVSSHPKVNG----------------KSFMNTNMVNTKK------ 101
Query: 265 TISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHAC 321
PE+ LLDLYSGCG MST LC G LS K+ RWA+++N H C
Sbjct: 102 --------------PELKLLDLYSGCGGMSTDLCQGGLLSSSKM--RWAVNMNEHEC 142
>gi|428163403|gb|EKX32476.1| hypothetical protein GUITHDRAFT_121371 [Guillardia theta CCMP2712]
Length = 675
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFE-SVDGEPYFKARWFYRAEDTVI- 182
Y + G Y G D Y++ EEG YIARI ++E + D RW+YR+++T +
Sbjct: 31 YVGVVLRGKYYASGADVYIRGEEGERQYIARITRMYERASDSARMIGCRWYYRSDETNLN 90
Query: 183 ---KDLAYLVDRKRVFLSDVEDDNPLNCI--VSKAKIAEVAANMDLEAKQKNIPPCDLYY 237
K + + + +++SDV DDNP+N I + + + +M+ +Q+N + Y
Sbjct: 91 KDKKKSSSGANDQELYISDVVDDNPVNTIEDLCNVRAKFLIEDMNAWLQQRN----NFTY 146
Query: 238 DMKYTLPHLTFSNINNESNRRDSDASSTISSET 270
+KY +P L + ++ + RDS A+ +S +
Sbjct: 147 SLKY-VPTLGVARELSDKDIRDSKAAFAANSRS 178
>gi|147790936|emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]
Length = 3216
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMK 240
V+K+ A D+KR+F S + +DN L+CI+SK + E+ + L K +IPP D YYDMK
Sbjct: 3121 VMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSL--KLDSIPPFDYYYDMK 3178
Query: 241 YTLPHLTFSNI 251
Y + + TF +
Sbjct: 3179 YNVEYSTFHTL 3189
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 71 FFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAA------GVSSIGALNEEEEVLQARCH 124
FF+G PV EA +R+ RY + ++ A VS NEEE V CH
Sbjct: 2948 FFIGDPVPDKEAQERWHWRYDLKAPPRVMVEMLAISFETFVVSQSADDNEEEIVTNVECH 3007
Query: 125 YTQASVDGCLYNLGDDAYVKAEE 147
YTQA +DG ++NLGD A++K E
Sbjct: 3008 YTQAKLDGTIFNLGDCAHIKFME 3030
>gi|169977310|emb|CAQ18902.1| chromomethylase [Nicotiana sylvestris]
Length = 55
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFE 161
++ ++++QA+CH+ QA VDG +YNLGDDAYV+A DYI +IVE F+
Sbjct: 7 DDADQLIQAKCHFAQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQ 55
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDL---EAK 226
K R FYR ED ++ AY D + ++ S D P + K ++ + ++M L
Sbjct: 968 KVRRFYRPEDVSVEK-AYASDIQELYYSQDTDVLPPGALEGKCEVRK-KSDMPLCREYPI 1025
Query: 227 QKNIPPCDLYYDMKY----TLP---HLTFSNINNESNRRDSDA----SSTISSETGSNSP 275
+I CDL++D LP L FS I +++ R S T+S + P
Sbjct: 1026 SDHIFFCDLFFDSSKGSLKQLPANMKLKFSTIKDDTLLRKKKGKGVESETVSEIVKPDEP 1085
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ K NHPE+ V
Sbjct: 1086 PKEIRLATLDIFAGCGGLSQGL----KKAGVS-DTKWAIEYEEPAGQAFKQNHPESTV 1138
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFE 161
+ G+ ++ A+ E+ L++ + G Y++ D Y G + +I ++VE +
Sbjct: 529 IPCGLDALEAMQEQCIPLES----GGVTYRGIDYHVNDFVYHHNSGGNLLHIGQVVEFSD 584
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANM 221
EP + R F R D V+KD A D +R+F++DV + + KA +A ++
Sbjct: 585 LSCEEPMVQVRRFGRY-DHVVKDKAIPSDNRRLFMTDVIISVKMKAVEGKAFVACPSSPW 643
Query: 222 DLE--AKQKNIPPCDLY------YDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSN 273
E K + CDL+ ++ P + + + +T S
Sbjct: 644 QREQWVKADDHFYCDLFAKSLTPQSLEILQPTALVHCNRCYAAVLEEATEEELLLKTSS- 702
Query: 274 SPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ L+L++G G +STGL LSG + TRWA++++ ACK+ + NH + V
Sbjct: 703 ------KLRGLELFAGAGGLSTGL----DLSGF-VETRWAVELSESACKTFQANHQSSLV 751
Query: 334 RNEAADDFL 342
N+ L
Sbjct: 752 YNQNTSTLL 760
>gi|87240603|gb|ABD32461.1| hypothetical protein MtrDRAFT_AC151521g11v2 [Medicago truncatula]
Length = 81
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 22/70 (31%)
Query: 293 MSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLC 352
MSTGLC+GA LS V LVT VR E+A+DFL LLKEW KLC
Sbjct: 1 MSTGLCLGAKLSSVNLVT----------------------VRKESAEDFLHLLKEWEKLC 38
Query: 353 QYFSIYDTDK 362
+ +++ DT++
Sbjct: 39 KRYNVGDTER 48
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 49/287 (17%)
Query: 87 PDRYKYSSKGHKKKKVAAGVSSIGALNEEEEV---LQARCHYTQASVDGCLYNLGDDAYV 143
P+R + S A+G S + E+EE ++ T S +G Y++ D YV
Sbjct: 858 PERGGFFSLPLNDMGCASGTCSSCRIREDEEKKTEIKLNSSKTGFSCNGVDYSVDDYVYV 917
Query: 144 KAEE---------------------GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
K E+ V I I+ L ES K R YR ED V
Sbjct: 918 KPEDIDGSKEANGRFKSGRNIGLRPFVVCQILEIIVLKESRKASFEVKVRRLYRPED-VS 976
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK-----NIPPCDLYY 237
+ AY D + ++ S ED + L + + EV +D+ ++++ NI C+ Y
Sbjct: 977 DEKAYASDIQELYYS--EDTDVLQPEALEGR-CEVRKKIDMPSRREYPISDNIFFCEQIY 1033
Query: 238 D-MKYTLPHL------TFSNINNESNRRDSDASSTIS-SETGSNSP---IGEPEMSLLDL 286
D K +L L ++ + +E+ R ++ +++ ++ P E ++ LD+
Sbjct: 1034 DPSKGSLKQLPVNIKPKYTTVKDEALLRKRKGKGLVTETDSVTDKPEEVSKETRLATLDI 1093
Query: 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++GCG +S GL +GV T+WAI+ A K+ + NHPET V
Sbjct: 1094 FAGCGGLSQGL----EQAGVS-ATKWAIEYEEPAGKAFRKNHPETTV 1135
>gi|428176373|gb|EKX45258.1| hypothetical protein GUITHDRAFT_139172 [Guillardia theta CCMP2712]
Length = 311
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEG-AVDYIARIVELFE-SVDGEPYFKARWFYRAEDTVI 182
Y + +G + +L D YVK EE YI RI +L+ S G+ F+ +W YR +DT
Sbjct: 122 YESFAKNGDVISLLDCVYVKPEEKDQAAYIMRIRKLWGCSTTGQMKFRGQWLYRPQDTKH 181
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
L R+ VFLSD ED+NP++C+ +K +
Sbjct: 182 GSSCCLHARE-VFLSDWEDENPIDCVQTKCNV 212
>gi|291239223|ref|XP_002739528.1| PREDICTED: polybromo 1-like [Saccoglossus kowalevskii]
Length = 1989
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y Q +++ Y LGD Y++++E ++AR+ ++++ G+P+F WF +T
Sbjct: 1301 TYYEQLNIESGFYKLGDCVYLRSDEDR-PFLARMDKMWKDSAGDPWFHGPWFVHPSETEH 1359
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + + VFLS +ED NP+ I K +
Sbjct: 1360 QP-TRMFYKNEVFLSSIEDTNPMRSISGKCSV 1390
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R F+R ED + D AY D + ++ S+ P+ I K ++ + + D+ A
Sbjct: 996 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEVRKKYDIPSEDVPAIF 1054
Query: 228 KNIPPCDLYYD-MKYTLPHLTFSNINNESNRRDSDASSTISSETGS-----------NSP 275
++ C+ +YD + +L L S + DA+S G N
Sbjct: 1055 DHVFFCEYFYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNEA 1114
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
+ ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE KV
Sbjct: 1115 SQQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKVFI 1169
Query: 336 EAADDFLSLLKE 347
+ + FL ++ +
Sbjct: 1170 QNCNVFLRVVMQ 1181
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 30/275 (10%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 219 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 277
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTI--SSETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 278 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 337
Query: 281 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 338 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV---FV 389
Query: 339 DDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNE-EFEVE 397
D+ +LK C DTD S + ++ + E N ++ VP E EF
Sbjct: 390 DNCNVILKAIMDKCG-----DTDDCVSTS---EAAEQAAKLPEVNINNLPVPGEVEFING 441
Query: 398 SLTAVCYGDPNKTKKPGVYFKECCLIICYLTFVPF 432
+ N+ + +C +I+ +L+F +
Sbjct: 442 GPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEY 476
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 18/175 (10%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 971 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1029
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTI--SSETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 1030 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1089
Query: 281 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1090 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV 1139
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 30/275 (10%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 960 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1018
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTI--SSETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 1019 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1078
Query: 281 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1079 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV---FV 1130
Query: 339 DDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNE-EFEVE 397
D+ +LK C DTD S + ++ + E N ++ VP E EF
Sbjct: 1131 DNCNVILKAIMDKCG-----DTDDCVSTS---EAAEQAAKLPEVNINNLPVPGEVEFING 1182
Query: 398 SLTAVCYGDPNKTKKPGVYFKECCLIICYLTFVPF 432
+ N+ + +C +I+ +L+F +
Sbjct: 1183 GPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEY 1217
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 18/175 (10%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 971 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1029
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTI--SSETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 1030 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1089
Query: 281 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1090 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV 1139
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 18/175 (10%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 892 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 950
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTI--SSETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 951 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1010
Query: 281 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1011 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV 1060
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 172 RWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK--- 228
R FYR ED ++ AY D + V+ S P + I K EV D+ ++
Sbjct: 946 RRFYRPEDISVEK-AYASDIQEVYYSKDTYVLPPDAIKGKC---EVRKKTDMPLCREYPV 1001
Query: 229 --NIPPCDLYYDMK----YTLP---HLTFSNINNESNRRDSDASSTISSETGSNSPIGEP 279
+I C+L+YD LP L FS I ++ R+ + SET S P P
Sbjct: 1002 LDHIFFCELFYDSSNGYLKQLPSNMKLKFSTIKDDKLLREKKGKG-VESETDSVKPDEAP 1060
Query: 280 -EMSL--LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
EM L LD+++GCG +S GL +GV T+WAI+ A ++ K NHP+ V
Sbjct: 1061 KEMRLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPDATV 1112
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R F+R ED + D AY D + ++ S+ P+ I K ++ + ++ D+ A
Sbjct: 999 KVRRFFRPED-ISSDKAYSSDIREIYYSEDIHTVPVEIIKGKCEVRKKYDISSEDVPAMF 1057
Query: 228 KNIPPCDLYYD-----MKYTLP---HLTFSNI---NNESNRRDSDASSTISSETGSNSPI 276
+I C+ YD +K LP +L S I + S +R + N
Sbjct: 1058 DHIFFCEYLYDPLNGSLK-KLPAQINLILSKIKLDDATSRKRKGKGKEGVDEVGELNETS 1116
Query: 277 GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+ +S LD+++GCG +S GL SGV T WAI+ A + + NHP+TKV
Sbjct: 1117 PQNRLSTLDIFAGCGGLSEGL----QHSGVT-DTNWAIEYEAPAGDAFRLNHPKTKV 1168
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 830 ARRFYRPDDISTAK-AYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 888
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNES---NRRDSDASSTISSETGSNSPIGEPE 280
++ C+L YD +K P++ F ++ ++ ++++ + + S + P+
Sbjct: 889 HVFFCELIYDRASGALKQLPPNVRFMSMVQKATIASKKNKGKQICETDQIDSGKWLDVPK 948
Query: 281 ---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 949 ENRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFSKNHPEAVV 999
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 129 SVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR-----WFYRAEDTVIK 183
+ DG Y++ D ++E+G I +I+E+ S G + R + ++
Sbjct: 682 AFDGNTYHVFDFVLYRSEQGP-SKIGQIIEIIRSTGGRAPLRLRVKKVGRLWDLVGKIVN 740
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI-AEVAANMDLEAKQK-NIPPCDLYYDMKY 241
+ D + VFL+D E P I++K + + + L + N+ P Y ++Y
Sbjct: 741 PTEEIKDERHVFLTDEEAVIPYADIITKCTVFSHESFGQRLSLRNWLNMSPTHFY--LQY 798
Query: 242 TLPHLTFSNINNESNR---RDSDASSTISSETGSN--------SPIGEPEMSLLDLYSGC 290
P L +E R RD S+ + E + + + E M++LDL+ G
Sbjct: 799 HFPTLQ-PEAWDEKKRVSFRDLSVCSSCTKEALAKYYDMQTFKTKMQENPMAVLDLFGGA 857
Query: 291 GAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
GA S GL G+ L A++I+P A K+++ N T+V N+ + L
Sbjct: 858 GAFSLGLKEGSEC----LKVTHALEISPSAAKTIRRNCAGTQVINQCVNAVL 905
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 136 NLGDDAYVKAE--EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKR 193
N+G AYV + E V + +I E +S+ + R F+R ED + + AY D +
Sbjct: 835 NVGLKAYVVCQMLEIVVPKVPKIAET-KSIQ----VQVRRFFRPED-ISAEKAYCSDIRE 888
Query: 194 VFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCD-------------LYYDMK 240
V+ S+ P+ I K ++ K+ ++PPCD LY K
Sbjct: 889 VYYSEETHSVPVETIEGKCEVM----------KKHDLPPCDVPAIFDHVFFCERLYDPSK 938
Query: 241 YTLPHLTFSNINNESNRRDSD----ASSTISSETGSNS--------PIGEPEMSLLDLYS 288
L L S R++ D ++ G N E ++ LD+++
Sbjct: 939 GCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLEVERQIDAFHENRLATLDIFA 998
Query: 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 999 GCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPES 1036
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 136 NLGDDAYVKAE--EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKR 193
N+G AYV + E V + +I E +S+ + R F+R ED + + AY D +
Sbjct: 955 NVGLKAYVVCQMLEIVVPKVPKIAET-KSIQ----VQVRRFFRPED-ISAEKAYCSDIRE 1008
Query: 194 VFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCD-------------LYYDMK 240
V+ S+ P+ I K ++ K+ ++PPCD LY K
Sbjct: 1009 VYYSEETHSVPVETIEGKCEVM----------KKHDLPPCDVPAIFDHVFFCERLYDPSK 1058
Query: 241 YTLPHLTFSNINNESNRRDSD----ASSTISSETGSNS--------PIGEPEMSLLDLYS 288
L L S R++ D ++ G N E ++ LD+++
Sbjct: 1059 GCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLEVERQIDAFHENRLATLDIFA 1118
Query: 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 1119 GCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPES 1156
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 46/238 (19%)
Query: 136 NLGDDAYVKAEEGAVDYIARIVELFESVDGEPY---FKARWFYRAEDTVIKDLAYLVDRK 192
N+G A+V + I IV+L E G K R FYR +D V + AY D +
Sbjct: 819 NVGLRAFVVCQ------ILDIVDLKEPKKGNTTSFEVKVRRFYRPDD-VSAEEAYASDIQ 871
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK-----NIPPCDLYYDMK----YTL 243
V+ S+ P I K EV D+ ++ ++ CD +YD L
Sbjct: 872 EVYYSEDTYILPPEAIKGKC---EVMKKTDMPLCREYPILDHVYFCDRFYDSSNGCLKKL 928
Query: 244 PH---LTFSNINNESNRRDSDASSTISSETGS-------NSPIGEPEMSLLDLYSGCGAM 293
P+ L FS I +++ R+ +ETGS P G+ ++ LD+++GCG +
Sbjct: 929 PYNMMLKFSTIKDDTLLREK------KTETGSAMLLKPDEVPKGK-RLATLDIFAGCGGL 981
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 351
S GL +GV T+WAI+ A ++ K NHP+T V + + L + W +L
Sbjct: 982 SYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRI--SWLRL 1032
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 80 DEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGD 139
DE + + P + S + H+K + S + E+ + + Y ++ L N+G+
Sbjct: 409 DEPMLKSPSKTDLSPRHHRKGQEKK--SFVKWACEDFVERKGKKLYKSVQINNELINIGE 466
Query: 140 DAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSD 198
V + + YI R++ ++E ++G+ F A+W YR+ +TV+ ++ D VFLSD
Sbjct: 467 FVQVYPTDPSDPLYICRVMYMWEDLNGDKKFHAQWLYRSSETVLGEVG---DPSEVFLSD 523
Query: 199 VEDDNPLNCIVSKAKIAEVAAN 220
DD L I+SK ++ A+
Sbjct: 524 DCDDIKLGAIMSKCNVSSKFAS 545
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 272 SNSPIGEP--EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTR-WAIDINPHACKSLKFNH 328
SN P E ++ LD+++GCG +S GL V +V WAI+ P A ++ + N+
Sbjct: 795 SNFPAYEKVEKLRTLDIFAGCGGLSEGL------DQVGVVNSCWAIEFEPSAAQAYRLNN 848
Query: 329 PETKVRNEAADDFLSLLKE 347
P V N+ ++ L + E
Sbjct: 849 PSAIVFNQDCNNVLKQIME 867
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAK--- 226
K R FYR ED V + AY D + ++ S P + K ++ + ++M L +
Sbjct: 938 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 995
Query: 227 QKNIPPCDLYYDM-KYTLPHL------TFSNINNES---NRRDSDASSTISSE-TGSNSP 275
+I CDL++D K +L L FS I +++ ++ S I SE P
Sbjct: 996 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEP 1055
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 1056 PKEIRLATLDIFAGCGGLSHGLK-KAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 1108
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 53/287 (18%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--ANMDLEAKQK 228
R FYR +D + D AY D + V+ S+ + P++ I K + + +N DL +
Sbjct: 982 VRRFYRPDD-ISSDKAYTSDIREVYYSEDIINVPVDMIEGKCDVRKKIDISNSDLPVMVE 1040
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINN---------------ESNRRDSDASSTISS 268
++ C+ YD +K P++ +++ E+++ DSD +
Sbjct: 1041 HVFFCEHIYDPMTGALKQLPPNVKLTSMVQKAAGALKKNKGKQICENDQVDSDKRKEVPK 1100
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGL-CIGASLSGVKLVTRWAIDINPHACKSLKFN 327
E +S LD+++GCG +S GL GAS T+WAI+ A ++ + N
Sbjct: 1101 EN---------RISTLDIFAGCGGLSEGLQQAGASF------TKWAIEYEEPAGEAFRQN 1145
Query: 328 HPETKVRNEAADDFLSLLKEWAKLCQYFS-IYDTDKVPEQSLNFMSEDEEEEEEEENDDD 386
HPE V D+ +LK C S T + EQ+ EEN +
Sbjct: 1146 HPEAAV---FVDNCNVILKAIMDKCGDASDCVSTSEAAEQAAKLA---------EENIKN 1193
Query: 387 SNVPNE-EFEVESLTAVCYGDPNKTKKPGVYFKECCLIICYLTFVPF 432
VP E EF + N+ + +C +I+ +L+F +
Sbjct: 1194 LPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEY 1240
>gi|428174516|gb|EKX43411.1| hypothetical protein GUITHDRAFT_110534 [Guillardia theta CCMP2712]
Length = 816
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
H+ S G L+ D A++K E+ Y+ RI +++E G+ FK WFYR + V +
Sbjct: 200 HFRAFSKQGVLFQKLDCAFLKPEQDHDLYVVRIDDMWEEPSGDMMFKGFWFYR-HNEVKR 258
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKY 241
++D + + LSD D NP+ ++ KA I + EA + LY +Y
Sbjct: 259 APTNMIDSE-LLLSDWADTNPIESVMGKAVILFAKNLLPREAWTAKVNGGILYDGREY 315
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R F+R ED + + AY D + VF S+ P+ I K ++ + + D+ A
Sbjct: 972 KLRRFFRPED-ISAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQKHDLPSCDVLATF 1030
Query: 228 KNIPPCD-LYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSL--- 283
++I C+ L+ K +L L S R+ D ++T + +GE ++ +
Sbjct: 1031 EHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAAT--RKRKGKGKVGEDDLKVERQ 1088
Query: 284 -----------LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 332
LD+++GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 1089 KTAFQENCLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPESS 1143
Query: 333 V 333
+
Sbjct: 1144 M 1144
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAK--- 226
K R FYR ED V + AY D + ++ S P + K ++ + ++M L +
Sbjct: 970 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 1027
Query: 227 QKNIPPCDLYYDM-KYTLPHL------TFSNINNES---NRRDSDASSTISSE-TGSNSP 275
+I CDL++D K +L L FS I +++ ++ S I SE P
Sbjct: 1028 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEP 1087
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 1088 PKEIRLATLDIFAGCGGLSHGLK-KAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 1140
>gi|391326863|ref|XP_003737929.1| PREDICTED: protein polybromo-1-like [Metaseiulus occidentalis]
Length = 1684
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
++ Q + G Y GD YV+ E + +ARI +++ G+ +F WF ++
Sbjct: 1101 TYFEQITFSGGTYRTGDCVYVRTE--TTNLMARIEKMWTDKQGKGFFHGPWFVTPQEIHS 1158
Query: 183 KDLA----YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDL---EAKQKNIPPCDL 235
A Y R+ VFLS +ED NPL I S+ + +++ M + E +++I C+
Sbjct: 1159 SGAAPGRQYF--RQEVFLSSIEDTNPLLAITSRCHVMDLSEYMTIRPTELTEQDIYICEN 1216
Query: 236 YYD 238
Y+
Sbjct: 1217 TYN 1219
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 119/297 (40%), Gaps = 64/297 (21%)
Query: 86 YPDRYKYSSKGHKKKKVAAGVSSIGALNEEEE---VLQARCHYTQASVDGCLYNLGDDAY 142
+P+R + S + +GV L E EE V + + ++G Y+L D Y
Sbjct: 902 WPERGAFFSLPFDTLGLGSGVCQSCQLQEAEEEKDVFKINSSKSSFVLEGTEYSLNDYVY 961
Query: 143 V-------KAEEGA----------VDYIARIVELFESVDGEPY------FKARWFYRAED 179
V K E+G I +++E+ + + K R F+R ED
Sbjct: 962 VSPFEFEEKIEQGTHKSGRNVGLRAYVICQVLEIIAKKETKQAEIKSTDIKVRRFFRPED 1021
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLE-----AKQKNIP 231
V + AY D + V+ SD C +S I EV +D+ NI
Sbjct: 1022 -VSSEKAYCSDVQEVYYSDEA------CTISVQSIEGKCEVRKKIDVPEGCAPGIFHNIF 1074
Query: 232 PCDLYYD--------------MKYTLPHLTFSNINNESNR-RDSDASSTISSETGSNSPI 276
C+L YD +KY+ H + + + ++ D S E +++
Sbjct: 1075 FCELLYDPATGALKKLPAHIKVKYSTGHTADAAARKKKGKCKEGDNISEPDPERKTSN-- 1132
Query: 277 GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE V
Sbjct: 1133 -EKRLATLDIFAGCGGLSEGL----HQSGVS-STKWAIEYEEPAGNAFKANHPEALV 1183
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R F+R ED + + AY D + VF S+ P+ I K ++ + + D+ A
Sbjct: 859 KLRRFFRPED-ISAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQKHDLPSCDVLATF 917
Query: 228 KNIPPCD-LYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSL--- 283
++I C+ L+ K +L L S R+ D ++T + +GE ++ +
Sbjct: 918 EHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAAT--RKRKGKGKVGEDDLKVERQ 975
Query: 284 -----------LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 332
LD+++GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 976 KTAFQENCLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPESS 1030
Query: 333 V 333
+
Sbjct: 1031 M 1031
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAK--- 226
K R FYR ED V + AY D + ++ S P + K ++ + ++M L +
Sbjct: 39 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 96
Query: 227 QKNIPPCDLYYDM-KYTLPHLT------FSNINNES---NRRDSDASSTISSE-TGSNSP 275
+I CDL++D K +L L FS I +++ ++ S I SE P
Sbjct: 97 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEP 156
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 157 PKEIRLATLDIFAGCGGLSHGL-KKAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 209
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 62/296 (20%)
Query: 86 YPDRYKYSSKGHKKKKVAAGVS---SIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAY 142
+P+R + S + +GV +I ++ +E+ + + +DG Y+L D Y
Sbjct: 883 WPERGAFFSLPFDTLGLGSGVCHSCNIQEADKAKEIFKVNSSKSSFVLDGTEYSLNDYVY 942
Query: 143 V-------KAEEGA-------------VDYIARIVELFESVDGE---PYFKARWFYRAED 179
V K E+G V + I+ E+ E K R F+R ED
Sbjct: 943 VSPFEFEEKIEQGTHKSGRNVGLKAFVVCQVLEIIAKKETKQAEIKSTELKVRRFFRPED 1002
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE-----AKQKNIPPCD 234
V + AY D + V+ SD + + K EV +D+ N+ C+
Sbjct: 1003 -VSSEKAYCSDVQEVYFSDETYTISVQSVEGKC---EVRKKIDIPEGSAPGAFHNVFFCE 1058
Query: 235 LYYD-----MKYTLPHLTFS-----NINNESNRR-------DSDASSTISSETGSNSPIG 277
L YD +K H+ +N + ++ DS + I S+T +
Sbjct: 1059 LLYDPATGSLKKLPSHIKVKYSSGPTADNAARKKKGKCKEGDSISVPDIKSKTSN----- 1113
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCGA+S GL + S T+WAI+ A + K NHPE V
Sbjct: 1114 ENRLATLDIFAGCGALSEGLHKSGASS-----TKWAIEYEEPAGNAFKANHPEALV 1164
>gi|189234458|ref|XP_001808258.1| PREDICTED: similar to polybromo-1 [Tribolium castaneum]
Length = 1648
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 138 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
GD YV A+ G IA+I ++++ DG+ YF+ WF A + V L ++ VFLS
Sbjct: 1126 GDFVYVAAD-GGRQMIAQIDSIWDTKDGKCYFRGPWFV-APNEVPHSQNRLFYKQEVFLS 1183
Query: 198 DVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
+ED NPL I+ K + E N + + IP D++
Sbjct: 1184 SMEDTNPLVSIMGKCAVLEF--NEYISCRPTEIPESDIF 1220
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 41/219 (18%)
Query: 136 NLGDDAYVKAEEGAVDYIARIVELF---ESVDGEPYFKARWFYRAEDTVIKDLAYLVDRK 192
N+G A+V + ++VE+ +S G R FYR ED V + AY D +
Sbjct: 928 NIGLRAFV---------VCQLVEIIVPKKSRKGSFEVNVRRFYRPED-VSERKAYASDIR 977
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEA-----KQKNIPPCDLYYD-MKYTLPHL 246
V+ S ED + K K EV D+ + +NI C+ YD K ++ L
Sbjct: 978 EVYYS--EDTFVVQPEALKGK-CEVRKKKDMPSCSEFPISENIFFCEQIYDPSKGSVKQL 1034
Query: 247 TFSNINNESNRRD-----SDASSTISSETGSNSPIGEPE-------MSLLDLYSGCGAMS 294
S S +D + SETGS I +P+ ++ LD+++GCG +S
Sbjct: 1035 PLSTKPKYSTVKDDALLRKKKGKGVESETGSG--IVKPDELPKEMRLATLDIFAGCGGLS 1092
Query: 295 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
GL +GV T+WAI+ A ++ + NHPET V
Sbjct: 1093 QGL----EQAGVS-ATKWAIEYEGPAGEAFRKNHPETTV 1126
>gi|270001742|gb|EEZ98189.1| hypothetical protein TcasGA2_TC000618 [Tribolium castaneum]
Length = 1660
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 138 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
GD YV A+ G IA+I ++++ DG+ YF+ WF A + V L ++ VFLS
Sbjct: 1138 GDFVYVAAD-GGRQMIAQIDSIWDTKDGKCYFRGPWFV-APNEVPHSQNRLFYKQEVFLS 1195
Query: 198 DVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
+ED NPL I+ K + E N + + IP D++
Sbjct: 1196 SMEDTNPLVSIMGKCAVLEF--NEYISCRPTEIPESDIF 1232
>gi|427788393|gb|JAA59648.1| Putative protein polybromo-1 [Rhipicephalus pulchellus]
Length = 1571
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 99 KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVE 158
+ VA VSS EEE V +Y Q ++ ++ LGD YV+ E I RI +
Sbjct: 1098 RPNVAVSVSS-----EEENV----TYYEQLNLPSGVFKLGDCCYVRTEHSKT-LIGRIDK 1147
Query: 159 LFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
++ +G +F WF + + + + R+ VFLS +ED NPL I+ + +
Sbjct: 1148 MWMDREGNGFFHGPWFVLPSE-IQHQPSRVFYRQEVFLSSIEDTNPLLSIIGRCSV 1202
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 132 GCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV-IKDLAYLV 189
G + ++GD Y++ +E+G +I + L+ GE + WFYR +T + +L
Sbjct: 908 GIVIHVGDFVYIEPSEKGMQPHITNVDRLWRDKSGEQWLYGCWFYRPNETFHLASRKFL- 966
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEV 217
+K VF SD + P+N ++ K + V
Sbjct: 967 -QKEVFKSDNYNSIPVNQVLGKCYVMPV 993
>gi|427788399|gb|JAA59651.1| Putative protein polybromo-1 [Rhipicephalus pulchellus]
Length = 1558
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 99 KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVE 158
+ VA VSS EEE V +Y Q ++ ++ LGD YV+ E I RI +
Sbjct: 1085 RPNVAVSVSS-----EEENV----TYYEQLNLPSGVFKLGDCCYVRTEHSKT-LIGRIDK 1134
Query: 159 LFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
++ +G +F WF + + + + R+ VFLS +ED NPL I+ + +
Sbjct: 1135 MWMDREGNGFFHGPWFVLPSE-IQHQPSRVFYRQEVFLSSIEDTNPLLSIIGRCSV 1189
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 132 GCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV-IKDLAYLV 189
G + ++GD Y++ +E+G +I + L+ GE + WFYR +T + +L
Sbjct: 908 GIVIHVGDFVYIEPSEKGMQPHITNVDRLWRDKSGEQWLYGCWFYRPNETFHLASRKFL- 966
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEV 217
+K VF SD + P+N ++ K + V
Sbjct: 967 -QKEVFKSDNYNSIPVNQVLGKCYVMPV 993
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R F+R ED + D AY D + ++ S+ P+ I K ++ + + D+ A
Sbjct: 994 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEVRKKYDIPSEDVPATF 1052
Query: 228 KNIPPCDLYYD-MKYTLPHLTFSNINNESNRRDSDASSTISSETGS-----------NSP 275
++ C+ YD + +L L S + DA+S G N
Sbjct: 1053 DHVFFCEYLYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVA 1112
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+ ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE KV
Sbjct: 1113 SQQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKV 1165
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R F+R ED + D AY D + ++ S+ P+ I K ++ + + D+ A
Sbjct: 996 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEVRKKYDIPSEDVPATF 1054
Query: 228 KNIPPCDLYYD-MKYTLPHLTFSNINNESNRRDSDASSTISSETGS-----------NSP 275
++ C+ YD + +L L S + DA+S G N
Sbjct: 1055 DHVFFCEYLYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVA 1114
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+ ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE KV
Sbjct: 1115 SQQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKV 1167
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 343
LD+++GCG GL +G LSG + T+WAI+ P A +L N P+ +V N+ A+ LS
Sbjct: 787 LDIFAGCG----GLTLGLDLSGA-VDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLLS 841
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVAANMDLEAKQ 227
K R FYR +D + AY D + V+ S+ P+ I K ++ + N DL A
Sbjct: 965 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1023
Query: 228 KNIPPCDLYYD-----MKYTLPHLTFSNINNE--SNRRDSDASSTISSETGSNSPI-GEP 279
+++ C+ YD +K P++ + + +++++ GS+ P G+
Sbjct: 1024 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1083
Query: 280 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1084 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1138
Query: 338 ADDFLSLL 345
+ L +
Sbjct: 1139 CNVILKAI 1146
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVAANMDLEAKQ 227
K R FYR +D + AY D + V+ S+ P+ I K ++ + N DL A
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1028
Query: 228 KNIPPCDLYYD-----MKYTLPHLTFSNINNE--SNRRDSDASSTISSETGSNSPI-GEP 279
+++ C+ YD +K P++ + + +++++ GS+ P G+
Sbjct: 1029 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 280 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 338 ADDFLSLL 345
+ L +
Sbjct: 1144 CNVILKAI 1151
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVAANMDLEAKQ 227
K R FYR +D + AY D + V+ S+ P+ I K ++ + N DL A
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1028
Query: 228 KNIPPCDLYYD-----MKYTLPHLTFSNINNE--SNRRDSDASSTISSETGSNSPI-GEP 279
+++ C+ YD +K P++ + + +++++ GS+ P G+
Sbjct: 1029 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 280 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 338 ADDFLSLL 345
+ L +
Sbjct: 1144 CNVILKAI 1151
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 95 KGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YI 153
K H+ KK+ + I + E + + +Y Q +DG +GD V ++ + Y+
Sbjct: 720 KMHQGKKMKQNKNRISWVGEAIKTDGKKSYYQQVCMDGETLEVGDCVSVIPDDPSKPLYL 779
Query: 154 ARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAK 213
AR+ L+E F A WF DTV L D + +FL D +D L+ I SK
Sbjct: 780 ARVTALWEDSSNGQMFHAHWFCAGSDTV---LGATSDPRELFLVDECEDMQLSYIHSKVN 836
Query: 214 IA--------EVAANMDLEAKQKNIPP------CDLYYDMKY 241
+ + MD EA IP L+YD Y
Sbjct: 837 VIYKPPSENWAMEGGMDPEATLPGIPKDGKTYFYQLWYDQDY 878
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 104/292 (35%), Gaps = 65/292 (22%)
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV----------------------- 150
E+ E + R Y+ A+ +G LY +GD Y+ E
Sbjct: 917 EQLEDMDTRVLYSSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEELYPE 976
Query: 151 ------DYI-------------ARIVELF--ESVDGEP-----YFKARWFYRAEDTVIKD 184
DYI RI E+F + +G+P K FYR E+T +
Sbjct: 977 HYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGKPNEAEIKIKLYKFYRPENTHKSN 1036
Query: 185 LA-YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTL 243
A Y D ++ SD E + + + + + P Y+ Y
Sbjct: 1037 PASYHADINLLYWSDEEAVVEFRAVQGRCTVEYGEDLPECLQEYSTGGPDRFYFLEAYNA 1096
Query: 244 PHLTFSNINNESNRRDSDASSTISSETGSNS----------PIGEPEMSLLDLYSGCGAM 293
TF + N + + + + S I P++ LD++SGCG +
Sbjct: 1097 KSKTFEDPPNHARSPGNKGKGKGKGKGKTKSQALEPSEPEQAIDLPKLRTLDVFSGCGGL 1156
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
S G +G+ T WAI++ A ++ + N+P + V E + L L+
Sbjct: 1157 SEGF----HQAGI-CETLWAIEMWEPAAQAFRLNNPGSTVFTEDCNVLLKLV 1203
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--ANMDLEAKQK 228
R FYR +D + AY+ D + V+ S+ P++ I K ++ + +N D+ +
Sbjct: 980 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVE 1038
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINN---------------ESNRRDSDASSTISS 268
+ C+ +YD +K P++ ++ ES++ DSD + +S
Sbjct: 1039 HEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSK 1098
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ NH
Sbjct: 1099 EN---------RLATLDIFAGCGGLSQGL----QQAGVSF-TKWAIEYEEPAGEAFTKNH 1144
Query: 329 PETKV 333
PE V
Sbjct: 1145 PEAAV 1149
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 112 LNEEEEVLQARCHYTQASVDG----CLYNLGDDAYVKAEEGAVD--YIARIVELFESVDG 165
+ E + V + +YT+ ++ CLY D E D Y+ RI+ ++E +G
Sbjct: 548 IGEPDFVEGGKSYYTEVLINNKEKVCLY----DVVSVCPEVPDDPLYLTRIMSMYEDSNG 603
Query: 166 EPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ F WF+R+ DTV+ + D + +FL D +DNPL I+ K ++
Sbjct: 604 KKMFHGWWFHRSTDTVLGETG---DPRELFLIDDCEDNPLGAIMDKVEV 649
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339
++ +LD+++GCG +S G +GV + WA++I+ A ++ + N+ +T V + +
Sbjct: 983 KLRMLDVFAGCGGLSEGF----HQAGVA-DSCWAVEIDEPAAQAFRLNNSQTTVFTDDCN 1037
Query: 340 DFLSLLKEWAK 350
LSL+ E AK
Sbjct: 1038 ILLSLVMEGAK 1048
>gi|440797846|gb|ELR18920.1| BAH domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1668
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 46/200 (23%)
Query: 36 QQEEQREDEEV--KEEPVELVTRVKKKTQKNKPDSDLFFVGPPVSVDEALKRYPDRYKYS 93
+ ++ ED EV KE + L R K+ P S + P + L R P R K
Sbjct: 77 RNRQEGEDYEVDDKEAAMGLTKR------KSAPSS--LTIEPSANAARKLGRPPKRRKTE 128
Query: 94 SKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-- 151
+ V +G +E R Y + GC Y GD Y+ A + D
Sbjct: 129 A-----------VEWVGRAKMDE--ASGRKLYRGFVLGGCKYETGDCVYLNAPKNESDED 175
Query: 152 -------YIARIVELFESVDGEPYFKARWFYRAED---TVIKDLAYL----------VDR 191
YIA+I+EL+E+ DG+ RWFY+ + +V++ L DR
Sbjct: 176 GLSEDRFYIAQIMELWETKDGKCMLSGRWFYQQREIDSSVLRSLMAFGEGEEEHIEETDR 235
Query: 192 KRVFLSDVEDDNPLNCIVSK 211
+ +F+S+ DDNP+ + K
Sbjct: 236 E-IFISEDYDDNPVRSVEGK 254
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--ANMDLEAKQK 228
R FYR +D + AY+ D + V+ S+ P++ I K ++ + +N D+ +
Sbjct: 971 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVE 1029
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINN---------------ESNRRDSDASSTISS 268
+ C+ +YD +K P++ ++ ES++ DSD + +S
Sbjct: 1030 HEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSK 1089
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ NH
Sbjct: 1090 EN---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNH 1135
Query: 329 PETKV 333
PE V
Sbjct: 1136 PEAAV 1140
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--ANMDLEAKQK 228
R FYR +D + AY+ D + V+ S+ P++ I K ++ + +N D+ +
Sbjct: 939 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVE 997
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINN---------------ESNRRDSDASSTISS 268
+ C+ +YD +K P++ ++ ES++ DSD + +S
Sbjct: 998 HEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSK 1057
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ NH
Sbjct: 1058 EN---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNH 1103
Query: 329 PETKV 333
PE V
Sbjct: 1104 PEAAV 1108
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--ANMDLEAKQK 228
R FYR +D + AY+ D + V+ S+ P++ I K ++ + +N D+ +
Sbjct: 928 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVE 986
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINN---------------ESNRRDSDASSTISS 268
+ C+ +YD +K P++ ++ ES++ DSD + +S
Sbjct: 987 HEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSK 1046
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ NH
Sbjct: 1047 EN---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNH 1092
Query: 329 PETKV 333
PE V
Sbjct: 1093 PEAAV 1097
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 37/185 (20%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--ANMDLEAKQK 228
R FYR +D + AY+ D + V+ S+ P++ I K ++ + +N D+ +
Sbjct: 997 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVE 1055
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINN---------------ESNRRDSDASSTISS 268
+ C+ +YD +K P++ ++ ES++ DSD + +S
Sbjct: 1056 HEFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSK 1115
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ NH
Sbjct: 1116 EN---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNH 1161
Query: 329 PETKV 333
PE V
Sbjct: 1162 PEAAV 1166
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 172 RWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK--- 228
R FYR ED + +LAY + + V+ S P I K EV D+ ++
Sbjct: 923 RRFYRPED-ISAELAYASEIQEVYYSQDTYILPPEAIKGKC---EVMKKHDMPLCREYPV 978
Query: 229 --NIPPCDLYYDMKY----TLP---HLTFSNINNESNRRDSDASSTISSETGSNSPIG-- 277
+I C+ +YD LP L FS I +E R+ +S ET S +
Sbjct: 979 LDHIFFCERFYDSSNDHLEKLPSNMKLKFSTIKDEKLLREKKGKGVLS-ETDSVMSVKPD 1037
Query: 278 ----EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ K NHP+T V
Sbjct: 1038 EVPKEMRLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPKTTV 1092
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 33/184 (17%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE----- 224
K R F+R ED ++ AY D + V+ S+ P++ I K EV DL
Sbjct: 1001 KVRRFFRPEDISVEK-AYCSDVREVYYSEELHILPVDSIEGKC---EVRRRSDLPECNAP 1056
Query: 225 AKQKNIPPCDLYYDMK----YTLP---HLTFSNINNESNRRDSDASSTISSETGSNSPIG 277
A ++I C+ YD LP + +S + ++ R + G + P
Sbjct: 1057 ALFQHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKC----KEGEDVPEV 1112
Query: 278 EPE--------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 329
E + ++ LD+++GCG +S GL +GV +T+WAI+ A ++ + NHP
Sbjct: 1113 EQQRVDSEHMRLATLDIFAGCGGLSEGL----HQAGVS-ITKWAIEYEEPAGQAFQLNHP 1167
Query: 330 ETKV 333
E+KV
Sbjct: 1168 ESKV 1171
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 27/230 (11%)
Query: 129 SVDGCLYNLGDDAY--VKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDL- 185
S G Y++ D Y VK+EE + IA IV + E P +A Y D +++DL
Sbjct: 418 SQHGVDYHISDFVYLRVKSEEAYLYQIAEIVNI-EPGGSLPIVEAS-LYGRYDLILRDLK 475
Query: 186 ---AYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDL-EAKQKNIPPCDLYY-D 238
A+ + D +R+F + + I K + +L E Q + D YY D
Sbjct: 476 GNEAWSLPKDNRRLFATPTITRVEASAIEGKVYVKPCRTKSELDEWLQAD----DHYYVD 531
Query: 239 MKYTLPHLT----FSNINNESNRRDSDASSTISSETGSNSPIGEPEMSL--LDLYSGCGA 292
+ P +T N++ R SE L LDL+SG G
Sbjct: 532 LWAQSPRVTSLKALMNLDYTCTRSCPQCLHAHDSERAEAKRFLNQRGPLRALDLFSGAGG 591
Query: 293 MSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
+STGL S++ T+WA++ +P A S + NHP+T V N+ + L
Sbjct: 592 LSTGLNCSDSVN-----TKWAVEFSPSAALSYQANHPDTIVYNQCTNLLL 636
>gi|406865911|gb|EKD18952.1| beta-Ala-His dipeptidase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 2005
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 107 SSIGALNEEEEVLQARCHYTQA----SVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
S GA ++ R TQA ++ G Y+ GD V +E + + ARI+ +FE
Sbjct: 1146 SDAGAYRLGTQIWYNRKLDTQAFASITLGGVSYHPGDCVIVASEAQSEEPRFARIISIFE 1205
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
D E RWF +T++ + A + +FL D NP+NCIV+K K+
Sbjct: 1206 DEDDEVSVHLRWFEVGSNTILGETA---GPRELFLLTSCDSNPVNCIVAKVKVG 1256
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 33/184 (17%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE----- 224
K R F+R ED ++ AY D + V+ S+ P++ I K EV DL
Sbjct: 993 KVRRFFRPEDISVEK-AYCSDVREVYYSEELHILPVDSIEGKC---EVRRRSDLPECNAP 1048
Query: 225 AKQKNIPPCDLYYDMK----YTLP---HLTFSNINNESNRRDSDASSTISSETGSNSPIG 277
A ++I C+ YD LP + +S + ++ R + G + P
Sbjct: 1049 ALFQHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKC----KEGEDVPEV 1104
Query: 278 EPE--------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 329
E + ++ LD+++GCG +S GL +GV +T+WAI+ A ++ + NHP
Sbjct: 1105 EQQRVDSEHMRLATLDIFAGCGGLSEGL----HQAGVS-ITKWAIEYEEPAGQAFQLNHP 1159
Query: 330 ETKV 333
E+KV
Sbjct: 1160 ESKV 1163
>gi|195996343|ref|XP_002108040.1| hypothetical protein TRIADDRAFT_52108 [Trichoplax adhaerens]
gi|190588816|gb|EDV28838.1| hypothetical protein TRIADDRAFT_52108 [Trichoplax adhaerens]
Length = 1204
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 107 SSIGALNEEEEVL------QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELF 160
++ G+ + E VL + + Y Q + + LGD YV++EE + YIARI +++
Sbjct: 735 TTTGSSDATENVLLPSIKEEGKTFYEQHKSETGTFKLGDYVYVRSEE-SWPYIARIDKIW 793
Query: 161 -ESVDGEPYFKARWFYRAEDTVIKDLA----YLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
+S YF WF R + IK + YL K VFLS++ED NP+ I+ + +
Sbjct: 794 NDSKTDLTYFHGPWFVRPLE--IKQSSNQEFYL---KEVFLSNIEDTNPILSIIGRCSVF 848
Query: 216 EV 217
V
Sbjct: 849 SV 850
>gi|321468833|gb|EFX79816.1| hypothetical protein DAPPUDRAFT_304382 [Daphnia pulex]
Length = 1593
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q ++ G GD YV+AE G IA+I ++ +F W+ + +
Sbjct: 1040 YYQQLNIPGHTLRTGDCVYVRAENGK-QLIAQIDSMWIDSGNVAFFHGPWYVTPAEISTQ 1098
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
+ R+ VFLS +ED NPL +V K
Sbjct: 1099 ITGRVFYRQEVFLSSIEDTNPLMSVVGK 1126
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
L+L++G G +STGL +SG+ + TRWA++ +P A ++ K NHP+T V ++ ++ L
Sbjct: 596 LELFAGAGGLSTGL----DMSGM-VQTRWAVEFSPSAARTYKANHPDTIVYSQCSNKLL 649
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 15/177 (8%)
Query: 174 FYRAEDTVIKD--LAYLVDRKRVFLSDVEDDNPLNC-IVSKAKIAEVAANMDLEAK---Q 227
F E I+D YL +R++ DV+D C +V +I +A DLE
Sbjct: 610 FKSGEKHAIRDSRRLYLTNRRKTI--DVDDKLLGKCQVVHPGRINNLAKYKDLEDTFYVS 667
Query: 228 KNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSL--LD 285
P C + T +N E D + + E + + + L +D
Sbjct: 668 GREPDCSDGTATRRTFDLEDLEPLNTEDFHDSVDGNEMVGMEEKRHETFSKAGLKLRAMD 727
Query: 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
+++GCG +S+GL G ++ T + I+ + A ++LK N P KV NE A+ L
Sbjct: 728 VFAGCGGLSSGLHEGGAVE-----TLYGIEWDIDASRTLKRNFPHMKVYNENANTLL 779
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 146 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPL 205
E A + ARIV +F + G+P RWF DT + + A K +FL D DD +
Sbjct: 381 ETAARVWFARIVNIFANKRGDPMAHVRWFSHGGDTFLDETA---GPKELFLLDRCDDIEM 437
Query: 206 NCIVSKAKI 214
+ IV K +
Sbjct: 438 STIVGKVNV 446
>gi|307178879|gb|EFN67419.1| DNA (cytosine-5)-methyltransferase PliMCI [Camponotus floridanus]
Length = 1126
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 114 EEEEVLQARCHYTQASVDGC-LYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKA 171
E+++++ + Y ++ + G + D V+ A+ +I +I+ ++E+ G F A
Sbjct: 511 EQDKIIDGQKTYYKSVIVGNERIQINDYVLVEPRNPAIPLHIYKIMFMWENKSGVKQFHA 570
Query: 172 RWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--------ANMDL 223
W R DT++ + + D +FLSD DD P + SKA + NMD+
Sbjct: 571 NWLRRGTDTILGETS---DPIELFLSDDCDDVPFTSVSSKATVIHKKMPDNWIELGNMDI 627
Query: 224 EAKQKNIPPCDLYYDMKYTLPHLTFSN 250
+ + K+ +Y M+YT F N
Sbjct: 628 DDEIKDTDGKTFFYQMRYTPETARFEN 654
>gi|70570929|dbj|BAE06647.1| transcription factor protein [Ciona intestinalis]
Length = 610
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y Q G LGD YV+ GA IAR+ L+ + G +F WF R E T
Sbjct: 49 TYYIQYYAQGMWVKLGDCLYVRNSGGAKPKIARVERLWTDMSGNVWFHGPWFVRPESTE- 107
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + + +FLS +ED ++ + K +
Sbjct: 108 HEPTRMFFKNELFLSSIEDTVLMSDVTGKCMV 139
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 174 FYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK---NI 230
FYR ED + ++ AY D + ++ S P I K ++ + ++M L + +I
Sbjct: 958 FYRPED-ISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRK-KSDMPLCREYPILDHI 1015
Query: 231 PPCDLYYDMKY----TLP---HLTFSNINNESNRRDSDASSTISSETGSNSPI------- 276
C+++YD P L FS I +E+ R+ ETG++S +
Sbjct: 1016 FFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGV---ETGTSSGMLMKPDEV 1072
Query: 277 -GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL +GV T+WAI+ A + K NHPE V
Sbjct: 1073 PKEKPLATLDIFAGCGGLSHGL----ENAGVS-TTKWAIEYEEPAGHAFKQNHPEATV 1125
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Megachile rotundata]
Length = 1698
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
++A+I+ ++E+ +G F A WF+R DT++ + + D +FLSD DD P + SK
Sbjct: 799 HVAKIIYMWETKNGLKQFHANWFHRGTDTILGETS---DPIELFLSDDCDDVPFKSVKSK 855
Query: 212 AKIA---------EVA-ANMDLEAKQKNIPPCDLYYDMKYT 242
+ E+ N+ LE + K++ +Y +YT
Sbjct: 856 CTVHFKKAPENWDEIGNTNLSLEDEIKDVDGKTFFYQKRYT 896
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 174 FYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK---NI 230
FYR ED + ++ AY D + ++ S P I K ++ + ++M L + +I
Sbjct: 956 FYRPED-ISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRK-KSDMPLCREYPILDHI 1013
Query: 231 PPCDLYYDMKY----TLP---HLTFSNINNESNRRDSDASSTISSETGSNSPI------- 276
C+++YD P L FS I +E+ R+ ETG++S +
Sbjct: 1014 FFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGV---ETGTSSGMLMKPDEV 1070
Query: 277 -GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL +GV T+WAI+ A + K NHPE V
Sbjct: 1071 PKEKPLATLDIFAGCGGLSHGL----ENAGVS-TTKWAIEYEEPAGHAFKQNHPEATV 1123
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 343
LD+++GCG GL +G LSG + T+W I+ P A +L N P+ +V N+ A+ LS
Sbjct: 787 LDIFAGCG----GLTLGLDLSGA-VDTKWDIEFAPSAANTLALNFPDAQVFNQCANVLLS 841
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R Y V L D V+ A+ +IA+++ ++E+ G F A W R DT
Sbjct: 530 RTFYKSVMVGNEKIELNDYVLVEPRNSAIPLHIAKVMYMWENKIGIKQFHANWVRRGTDT 589
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--------ANMDLEAKQKNIPP 232
++ + A D VFLSD +D P + SKA + NMD+ K+
Sbjct: 590 ILGETA---DPMEVFLSDDCEDVPFKSVNSKATVLHKKTPEDWSKLGNMDINDTIKDTDG 646
Query: 233 CDLYYDMKYT 242
+Y M+YT
Sbjct: 647 KTFFYKMRYT 656
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 153 IARIVELF--ESVDGEP-----YFKARWFYRAEDT-VIKDLAYLVDRKRVFLSDVEDDNP 204
I RI E+F + +G+P + FYR E+T AY D +++ SD E
Sbjct: 874 IGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSDINQLYWSDEEATVS 933
Query: 205 LNCIVSKAKIAEVAANMDLEAKQ--KNIPPCDLYYDMKYTLPHLTFSNINNESN------ 256
+ ++++ ++ E A ++ +E+ Q N P Y+ Y +F + N +
Sbjct: 934 MTEVLTRCRV-EYAEDL-VESVQDYSNKGPDRFYFLEAYNAKTKSFEDPPNHARSAVNKG 991
Query: 257 -------RRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLV 309
+ + ++ +G+ P+ P++ LD++SGCG +S G +G+
Sbjct: 992 KGKGKGKGKGKGKQRSRTTGSGAQEPV-VPKLRTLDVFSGCGGLSEGF----HQAGIS-E 1045
Query: 310 TRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
T WAI++ A ++ + N+P T V E + L L+
Sbjct: 1046 THWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1081
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y + V+ + +GD V ++ + Y+ARI L++ DGE F A WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + D +FL D +D L+ I K +
Sbjct: 684 GESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 46/250 (18%)
Query: 135 YNLGDDAYVKA---EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKD------- 184
YN+GD Y+K YI + FE+ G+ + RW R +D I
Sbjct: 731 YNIGDFIYLKTPYLNHEMPYYICMVDSFFENWKGQRQMRVRWLRRYQDIKILTTGEYHNV 790
Query: 185 LAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYY------- 237
L Y D + ++L+D DDN + I + + V D E + + D++Y
Sbjct: 791 LCY--DHQELYLTDEYDDNFIKNIKGRCAVFFVRKTEDFEKIEGSRDKKDIFYCKSKIVI 848
Query: 238 --------DMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSG 289
++ LTF + N N + I + +++ LD++SG
Sbjct: 849 VGEQISLLELSPQEIELTFKCMENNLN-------------AIKDQFIPKEKITALDIFSG 895
Query: 290 CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 349
CG GL +G +G+ + +++I+ A + + + + A++FL +K
Sbjct: 896 CG----GLSLGLERAGIHV--KYSIEFWKPAADTHHYYFKDCHTFCKNAEEFLKHIKVAN 949
Query: 350 KLCQYFSIYD 359
+L + F + D
Sbjct: 950 ELKKRFGLLD 959
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 133 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRK 192
C N+G A+V + +D I + E ++ + K FYR ED + ++ AY D +
Sbjct: 913 CGRNVGLKAFVVCQ--LLDVIV-LEESRKASNASFQVKLTRFYRPED-ISEEKAYASDIQ 968
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK-----NIPPCDLYYDMKY----TL 243
++ S P + K EV D+ ++ +I C+++YD
Sbjct: 969 ELYYSHDTYILPPEALQGKC---EVRKKNDMPLCREYPILDHIFFCEVFYDSSTGYLKQF 1025
Query: 244 P---HLTFSNINNESNRRDSDASSTISSETGSNSPI--------GEPEMSLLDLYSGCGA 292
P L FS I +E+ R+ ETG++S I E ++ LD+++GCG
Sbjct: 1026 PANMKLKFSTIKDETLLREKKGKGV---ETGTSSGILMKPDEVPKEMRLATLDIFAGCGG 1082
Query: 293 MSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+S GL +GV T+WAI+ A + K NHPE V
Sbjct: 1083 LSHGL----EKAGVS-NTKWAIEYEEPAGHAFKQNHPEATV 1118
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 136 NLGDDAYVKAEEGAVDYIARIVELFESVDGEPY---FKARWFYRAEDTVIKDLAYLVDRK 192
NLG AYV V + I+ ES P K R F+R ED ++ AY D +
Sbjct: 978 NLGLKAYV------VCQVLEIIGTKESKRPGPVSTQVKVRRFFRPEDISVEK-AYGCDIR 1030
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYT---------- 242
V+ S+ ++ I K ++ K+ ++P C+ ++T
Sbjct: 1031 EVYYSEETHIVTVDDIEGKCEVR----------KKSDLPVCNAPVTFEHTFFCEYLYDPS 1080
Query: 243 ------LP---HLTFSNINN--ESNRRDSDASSTISSET-GSNSPIGEPEMSLLDLYSGC 290
LP L +S + ES +R SE + + ++ LD+++GC
Sbjct: 1081 NGSIKQLPATIKLRYSTVGGDVESRKRKGKGKEGDVSEVEKQRADSVQKRLATLDIFAGC 1140
Query: 291 GAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
G +S GL +G+ L T+WAI+ A + K NHPE+ V
Sbjct: 1141 GGLSEGL----RQAGISL-TKWAIEYEEPAGDAFKLNHPESLV 1178
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 112 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 170
L E + + +Y+ ++ +LGD V ++ + YI + ++ES GE F
Sbjct: 379 LGEPAWIEGKKKYYSSVLINKKKVSLGDFVKVCPDDPHIPLYIGCVQYMWESSSGEKLFH 438
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
ARW R +TV+ + A D +FL D DDNPL ++ ++
Sbjct: 439 ARWMTRGAETVLGETA---DSAELFLCDDCDDNPLGSVLETCEVT 480
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQ-- 227
K R F+R ED ++ AY D + V+ S+ P++ I K EV DL
Sbjct: 1001 KVRRFFRPEDISVEK-AYSSDIREVYYSEQTHIVPVDNIERKC---EVRKKSDLPVCNAP 1056
Query: 228 ---KNIPPCDLYYD-----MKYTLPH--LTFSNINNESNRRDSDA----SSTISSETGSN 273
++I C+ YD +K H L +S ++ R +S
Sbjct: 1057 VIFQHIFFCEHLYDPSKGSIKQLPAHIKLRYSTGGGHADSRKRKGKCKEGENVSEVENQR 1116
Query: 274 SPIGEPEMSLLDLYSGCGAMSTGL-CIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 332
+ ++ LD+++GCG +S GL GAS +T+WAI+ A + K NHPE+
Sbjct: 1117 VDSEQKRLATLDIFAGCGGLSNGLRQSGAS------ITKWAIEYEEPAGDAFKLNHPESL 1170
Query: 333 V 333
V
Sbjct: 1171 V 1171
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 153 IARIVELF--ESVDGEP-----YFKARWFYRAEDT-VIKDLAYLVDRKRVFLSDVEDDNP 204
I RI E+F + +G+P + FYR E+T AY D +++ SD E
Sbjct: 75 IGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSDINQLYWSDEEATVS 134
Query: 205 LNCIVSKAKIAEVAANMDLEAKQ--KNIPPCDLYYDMKYTLPHLTFSNINNESN------ 256
+ ++++ ++ E A ++ +E+ Q N P Y+ Y +F + N +
Sbjct: 135 MTEVLTRCRV-EYAEDL-VESVQDYSNKGPDRFYFLEAYNAKTKSFEDPPNHARSAVNKG 192
Query: 257 -------RRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLV 309
+ + ++ +G+ P+ P++ LD++SGCG +S G +G+
Sbjct: 193 KGKGKGKGKGKGKQRSRTTGSGAQEPV-VPKLRTLDVFSGCGGLSEGF----HQAGIS-E 246
Query: 310 TRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
T WAI++ A ++ + N+P T V E + L L+
Sbjct: 247 THWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 282
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI------- 214
S G R FYR ED + AY D V+ + L + K +
Sbjct: 772 SKTGAEQLTVRKFYRPEDVDLGK-AYKADVHEVYFCERTTTISLAAVRGKCTVVKRQEFT 830
Query: 215 --AEVAANMDLEAKQKNIPPCDLYYD-MKYTLPHLTFSNINNESNRRDSDASSTISSETG 271
+E A MDL C YD +K T+ L +N+ A+S+++S G
Sbjct: 831 VASETKALMDLFF-------CSCVYDPLKGTVKQLP-ANVK----LGKPPAASSLASAKG 878
Query: 272 SNSPI-----------GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHA 320
+ + ++S+LD+++GCG +S G+ SG+ T+WAI+ + A
Sbjct: 879 KGKLVEDDRQPKETSANDEKLSMLDIFAGCGGLSEGI----HQSGIA-STKWAIEYDHAA 933
Query: 321 CKSLKFNHPETKV 333
++ K NHP V
Sbjct: 934 AEAFKMNHPTATV 946
>gi|238586055|ref|XP_002391053.1| hypothetical protein MPER_09571 [Moniliophthora perniciosa FA553]
gi|215455233|gb|EEB91983.1| hypothetical protein MPER_09571 [Moniliophthora perniciosa FA553]
Length = 494
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 273 NSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 332
N+ +G+ ++ L+L+SG G + TG+ + T+WA++I+P A S + NHP+T
Sbjct: 393 NNLMGQGKLRGLELFSGAGGLGTGMNSSGYVD-----TKWAVEISPAAAMSYRANHPDTI 447
Query: 333 V 333
V
Sbjct: 448 V 448
>gi|392595567|gb|EIW84890.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1176
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 343
L+L+ G G + TGL +SG + T+WA DI+P + K+ K NHP+ V N+ S
Sbjct: 676 LELFCGAGGLGTGL----EMSGF-VETKWAADISPSSAKTFKSNHPDATVYNQCT----S 726
Query: 344 LLKEWA 349
LL E A
Sbjct: 727 LLLEHA 732
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 115/298 (38%), Gaps = 68/298 (22%)
Query: 86 YPDRYKYSSKGHKKKKVAAGVSSIGALNE---EEEVLQARCHYTQASVDGCLYNLGDDAY 142
+P+R + S + +G+ S + N+ E+E T G Y++ D Y
Sbjct: 1091 WPERGAFFSLPVNCMGLGSGICSSCSANKDHTEKEKFSVSSCKTSFVYKGTEYSVHDFLY 1150
Query: 143 VKAEEGAVDYIAR---------------IVELFESV---------DGEPYFKARWFYRAE 178
V ++ A + + + I +L E V D K R FYR E
Sbjct: 1151 VSPDQFATERVGQETFKGGRNVGLKAFAICQLLEVVVPKKPQQADDSSTEVKVRRFYRPE 1210
Query: 179 DTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCD---- 234
D + + AY D + V+ S+ + I + ++ K+ ++P CD
Sbjct: 1211 D-ISDEKAYCSDIREVYYSEETHTLLVEAIEGRCEVR----------KKSDLPTCDAPTI 1259
Query: 235 ---------LYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPEM---- 281
LY K +L L SNI + S++ G GE ++
Sbjct: 1260 YEHVFYCEYLYDPHKGSLKQLP-SNIKLRYSTVKGAYDSSLRKNKGKCKE-GEDDLEAEK 1317
Query: 282 ------SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+ LD+++GCG +S GL SGV T+WAI+ A + K NHP+T +
Sbjct: 1318 SKENCLATLDIFAGCGGLSEGL----QQSGV-CRTKWAIEYEEPAGDAFKLNHPDTTM 1370
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQ 227
K R FY E+ + AY D + V+ S+ P+ I K ++ + N+D
Sbjct: 980 KVRRFYIPEN-ISAAPAYCSDIREVYYSEEIISVPVEMIEGKCEVRKRNDLPNLDFPVVI 1038
Query: 228 KNIPPCDLYYD-MKYTLPHLTFSNINNESNRRDSDASSTI---------SSETGSNS--- 274
++ CD YD +K L L + RR S+ + + GS+
Sbjct: 1039 DHVFFCDYSYDPVKGALNQLPANVKFTSLTRRASNTTRKKNKGKEKCKEGEQDGSDKLKD 1098
Query: 275 PIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
E ++ LD+++GCG +S GL SGV T+WAI+ A ++ NHPET
Sbjct: 1099 MAQENRLATLDIFAGCGGLSAGL----QQSGVSF-TKWAIEYEQPAGEAFSENHPET 1150
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 135 YNLGDDAYVKAEEGAVDY--IARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRK 192
Y++ D YVK + IA+I ++ S DG P + F R + T K+ L+ R
Sbjct: 480 YHVNDFVYVKMPTRQIGLLEIAQIAKILPS-DGNPQLEVTLFERPKYTP-KEATPLLQRS 537
Query: 193 RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNIN 252
+ V+ + +C+ I ++ D++A + P + D K L I
Sbjct: 538 LLSTGKVKKMS-ADCLDGHCFILRISDIDDIDAWLEG--PDNFVIDQKRPLEQCQKCLIA 594
Query: 253 NESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRW 312
E D+ + E + +DL+SG G ++TG+ SG + T W
Sbjct: 595 RELFSESEDS-------------VKELPLRAMDLFSGAGGLTTGM----DQSGF-IKTCW 636
Query: 313 AIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 351
A++ P A +SLK NH +T V N+ D LLK A+L
Sbjct: 637 AVERCPAAAQSLKANHADTVVYNQ---DCSELLKHVAEL 672
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 111 ALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAE------EGAVDYIARIVELFESVD 164
A+ EE+ ++ Y +DG Y++ D V + G+ + I+ +E +
Sbjct: 273 AIAWGEEIPASQGLYKSVFMDGVEYHMNDTVAVSTDGNGETAAGSSTWFGIIMYFYEVAE 332
Query: 165 GEP--------YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 216
+P YF RWF T++ + A + + +FL D DDNP+ I+ K +
Sbjct: 333 RKPGRSPRSGKYFHIRWFEHGSRTILGETA---NPQALFLLDQCDDNPVETILQKISVRH 389
Query: 217 VAANMDLE 224
++ + DLE
Sbjct: 390 LSVS-DLE 396
>gi|440793924|gb|ELR15095.1| chromo' (CHRromatin Organization MOdifier) domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Query: 98 KKKKVAAGVSSIG--ALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIAR 155
K K+++ V IG L + + Y G Y +GD ++ E+ A D+ A
Sbjct: 727 KMHKLSSIVQWIGKPILPPKRRGTSGKTFYRGFVFAGTTYRVGDCVTLRPEDEADDWYAI 786
Query: 156 IVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI- 214
I EL+E+ G+ + W YR +D V ++L + K + LS+ D NP+N I + +
Sbjct: 787 IDELYETRTGQLEMRGSWLYRPQD-VPEELVDDLHVKELCLSNHIDPNPVNSISRRILVL 845
Query: 215 -------AEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTF 248
E +LEA+ ++ L +K L L F
Sbjct: 846 SKEEFLPIEKKTRQELEAQFPDLATPALNKKIKSRLASLFF 886
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 95 KGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGA-VDYI 153
+G KKK+ + +S +G + + + +Y + +D +GD V +E Y+
Sbjct: 652 QGRKKKQSKSRISWVGHPVKSD---GKKDYYQKVCIDSETLQIGDCVSVSPDEPTKALYL 708
Query: 154 ARIVELFESVDG-EPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKA 212
ARI ++E V+ EP F WF R DTV L D +FL D +D L+ I K
Sbjct: 709 ARITAMWEDVNSSEPMFHVHWFCRGTDTV---LGATSDPLELFLVDECEDMQLSYIHGKV 765
Query: 213 KIA--------EVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTF 248
+ + +D+E K +Y M Y + F
Sbjct: 766 NVLYKAPSENWSLEGGLDVEIKMVEDDGRTYFYQMWYDQEYARF 809
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G A +S T WAI++ A ++ + N+P T V E
Sbjct: 1074 PKLRSLDVFSGCGGLSEGF-HQAEVS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1128
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1129 NVLLKLV 1135
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 733 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 792
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV++ + D +FL ++ L+ I SK K+
Sbjct: 793 MFHAHWFCAGTDTVLRATS---DPLELFLVGECENMQLSYIHSKVKV 836
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1136 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1190
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1191 EDCNVLLKLV 1200
>gi|340728006|ref|XP_003402324.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 730
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
++A+++ ++E+ +G F A W +R DT++ + + D +FLSD DD P + SK
Sbjct: 492 HVAKVIYMWENKNGMKQFHANWLHRGNDTILGETS---DPIELFLSDECDDVPFKAVRSK 548
Query: 212 AKI---------AEVAANMDL--EAKQKNIPPCDLYYDMKYT 242
+ AE+ NMDL E + K++ +Y +YT
Sbjct: 549 CTVIFKNVPKNWAEL-GNMDLNSENEVKDLDGKTFFYQKRYT 589
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 99 KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIV 157
KKK A V+ IG E EEV + R Y A +D GD + ++ +IAR++
Sbjct: 720 KKKKRAKVTWIG---EPEEVTKDRAFYKAAMIDDQKIENGDCVQIHPDDPTKPLFIARVI 776
Query: 158 ELFESVDGEPYFKARWFYRAEDTVI 182
+++ DGE F A+WF +TV+
Sbjct: 777 YMWQDSDGEMMFHAQWFVYGSETVL 801
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 99 KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIV 157
KKK A V+ IG E EEV + R Y A +D GD + ++ +IAR++
Sbjct: 720 KKKKRAKVTWIG---EPEEVTKDRAFYKAAMIDDQKIENGDCVQIHPDDPTKPLFIARVI 776
Query: 158 ELFESVDGEPYFKARWFYRAEDTVI 182
+++ DGE F A+WF +TV+
Sbjct: 777 YMWQDSDGEMMFHAQWFVYGSETVL 801
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 1151
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFS 249
D + VFLSD L + + IA + A DL P ++ + Y LP+ S
Sbjct: 570 DERHVFLSDERVSVALRYLGDQLHIAHLRAIPDLSTWHSLSP---FHFHLTYQLPNAKPS 626
Query: 250 NINNE--SNRRDSDASSTISSETGSNSPIGE-----PEMSLLDLYSGCGAMSTGLCIGAS 302
E R+ S + + E P + LD+++G GA G+
Sbjct: 627 RWTPEPLDYRKARICVSCMKVQIKKFQRKKEGRGEGPTLRALDVFAGVGAFGLGM---EE 683
Query: 303 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
G+K+ AI+I+P A K+LK N P V N+ A+ L
Sbjct: 684 AGGIKVTH--AIEISPSAAKTLKLNAPNVTVYNQDANLVL 721
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK- 228
K R F+R+ED ++ AY D + V+ S+ + P+ I K EV DL + K
Sbjct: 998 KVRRFFRSEDISAEN-AYCSDIREVYYSEHIETFPILDIQGKC---EVRKKHDLPSFDKL 1053
Query: 229 ----NIPPCDLYYD-----MKYTLPHLTFSNINNESN-----RRDSDASSTISSETGSN- 273
+I C+ YD +K H+ S+ N R+ ++ N
Sbjct: 1054 AIFEHIFFCEHIYDPEKGTIKQLPAHIKLSSSKERMNDDILYRKKKGKCKEGENDFDDNV 1113
Query: 274 ---SPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
+ +++ LD+++GCG +S GL +G+ VT+WAI+ A ++ K NHPE
Sbjct: 1114 KRSEALSRNQLATLDIFAGCGGLSEGL----ERAGIS-VTKWAIEYEEPAGEAFKQNHPE 1168
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 251 INNESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVT 310
+++ S R+ SDA+ E N P+ E ++ LD+++GCG +S GL +GV VT
Sbjct: 77 LSSPSERQISDAAQRKKKE---NLPL-ENRLATLDIFAGCGGLSEGL----QQAGVS-VT 127
Query: 311 RWAIDINPHACKSLKFNHPET 331
+WAI+ A ++ NHPE
Sbjct: 128 KWAIEYEEPAGEAFSLNHPEA 148
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 114 EEEEVLQA--RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 170
E E VL+ + Y A ++G + ++GD VK ++ + YIA+I +E DG F
Sbjct: 395 EGEPVLKKSKKTFYASARLNGEILSVGDYVSVKPDDPSTPVYIAQIKYFYEDSDGTMMFH 454
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
A+W+ R DTV+ + + D K +F+ D + L V K+
Sbjct: 455 AQWYSRGSDTVLGEAS---DPKELFVVDECQNTQLAFCVEAVKV 495
>gi|145537886|ref|XP_001454654.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422420|emb|CAK87257.1| unnamed protein product [Paramecium tetraurelia]
Length = 234
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 121 ARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGE----PYFKARWFYR 176
+R +Y + DG +Y +G + +KA+ VDY+A+++++ + VD P K +W+YR
Sbjct: 50 SRTYYKKLKYDGIIYKIGQNLCIKADR-RVDYVAKLIKIVKLVDTNDEIYPLIKVQWYYR 108
Query: 177 ---AEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
D + L Y + VF ++ D + IVS A I
Sbjct: 109 KFELGDLPVTQLDY-ISENEVFKTNEYDYIEIESIVSLASI 148
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 168 YFKARWFYRAEDTVIKD-LAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAK 226
Y + YR E+T + L D ++ SD E D LNCIV K IA + N++ +
Sbjct: 804 YVTVKKMYRPENTHRGESLKKKSDMNMLYWSDEECDVRLNCIVGKCYIA-YSENLNQSIE 862
Query: 227 QKNIP-PCDLY----YDM---KYTLPHLTFSNINNESNRRDSDASSTISSETG-SNSPIG 277
+ + P Y YD+ +YT P ++ + S + ET + P+
Sbjct: 863 EWSASGPHRFYFSEAYDLNNEEYTEPPAHACSVTKSFKKDVKAKSKSKKVETIIEDIPVS 922
Query: 278 EPEMS----LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
P++S LD+++GCG +S GL +GV + WAI+ + A + + N+P+ V
Sbjct: 923 LPQISHKLRTLDVFAGCGGLSEGL----KQAGVA-ESLWAIENDTAAAHAYRLNNPKASV 977
Query: 334 RNEAADDFL 342
+ FL
Sbjct: 978 FTTDCNSFL 986
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 752 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 811
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 812 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 855
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1155 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1209
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1210 EDCNVLLKLV 1219
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 718 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 777
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 778 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 821
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1121 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1175
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1176 EDCNVLLKLV 1185
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 734 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 793
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 794 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1137 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1191
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1192 EDCNVLLKLV 1201
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 733 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 792
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 793 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1136 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1190
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1191 EDCNVLLKLV 1200
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 797 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 856
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 857 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 900
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1200 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1254
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1255 EDCNVLLKLV 1264
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 741 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 800
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 801 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 844
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1144 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1198
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1199 EDCNVLLKLV 1208
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 759 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 818
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 819 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 862
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1162 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1216
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1217 EDCNVLLKLV 1226
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 733 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 792
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 793 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1137 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1191
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1192 EDCNVLLKLV 1201
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 733 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 792
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 793 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1136 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1190
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1191 EDCNVLLKLV 1200
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 616 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 675
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 676 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 719
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1019 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1073
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1074 EDCNVLLKLV 1083
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 615 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 674
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 675 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 718
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1018 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1072
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1073 EDCNVLLKLV 1082
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 615 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 674
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 675 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 718
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1019 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1073
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1074 EDCNVLLKLV 1083
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 444 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 503
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 504 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 547
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 847 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 901
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 902 EDCNVLLKLV 911
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 88 DRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQ--ARCHYTQASVDGCLYNLGDDAYVKA 145
++ K S +KK+ ++ IG E VL R +Y Q S++ + +GD V +
Sbjct: 584 EKTKKVSHAKRKKQTECNLTWIG-----EPVLTEGKRNYYKQVSINDEVLEVGDCVSVSS 638
Query: 146 EEGAVDYI-ARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
E+ +V I ARI L+E G+ F A WF R TV+ + + D + L D +D
Sbjct: 639 EDPSVPLILARITSLWEDTHGK-MFHAHWFMRGIHTVLGECS---DPLELVLVDDCEDMQ 694
Query: 205 LNCIVSKAKI 214
LN + K I
Sbjct: 695 LNYVQGKVNI 704
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
++A+++ ++E+ +G F A W +R DT++ + + D +FLSD DD P + SK
Sbjct: 519 HVAKVIYMWENKNGIKQFHANWLHRGNDTILGETS---DPIELFLSDDCDDVPFKSVRSK 575
Query: 212 AKI---------AEVAANMDLEAKQ--KNIPPCDLYYDMKYT 242
+ AE+ NMDL ++ K++ +Y +YT
Sbjct: 576 CTVIFKNVPKNWAEL-GNMDLNSENEIKDLDGKTFFYQKRYT 616
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 39/193 (20%)
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI------- 214
S G R FYR ED + AY D V+ + L + K +
Sbjct: 908 SKTGAEQLTVRKFYRPEDVDLGK-AYKADVHEVYFCERTTTISLAAVRGKCTVVKRQEFT 966
Query: 215 --AEVAANMDLEAKQKNIPPCDLYYD-MKYTLPHLTFSNINNESNRRDSDASSTISSETG 271
+E A MDL C YD +K T+ L +N+ +S+++S G
Sbjct: 967 VASETKALMDLFF-------CSCVYDPLKGTVKQLP-ANVK----LGKPPVASSLASAKG 1014
Query: 272 SNSPI-----------GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHA 320
+ + ++S+LD+++GCG +S G+ SG+ T+WAI+ + A
Sbjct: 1015 KGKLVEDDRQPKETSANDEKLSMLDIFAGCGGLSEGI----HQSGIA-STKWAIEYDHAA 1069
Query: 321 CKSLKFNHPETKV 333
++ K NHP V
Sbjct: 1070 AEAFKMNHPTATV 1082
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 117/298 (39%), Gaps = 74/298 (24%)
Query: 87 PDRYKYSSKGHKKKKVAAGVSSIGALNE---EEEVLQARCHYTQASVDGCLYNLGDDAYV 143
PD+ + S + +G+ S L++ E+E T +G Y++ D YV
Sbjct: 877 PDKGAFLSLPLNSMGLGSGICSSCKLDKDLTEKEKFVVHSDKTSFVFNGTEYSIHDFLYV 936
Query: 144 KAEEGAVDYIAR---------------IVELFESV------DGEPY---FKARWFYRAED 179
++ + + + I +L E + EP+ K R FYR ED
Sbjct: 937 SPQQFSTERVGNETFKGGRNVGLKAYAICQLLEIIVPKAPKQAEPHSTEIKVRRFYRPED 996
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN-IPPCD---- 234
+ + AY D + V+ S E+ + ++ + + E ++KN +P CD
Sbjct: 997 -ISDEKAYCSDIREVYYS--EETHTIDAETVEGRC---------EVRKKNDLPSCDAPTI 1044
Query: 235 ---------LYYDMKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPE----- 280
LY K +L L N R + + +SS + E E
Sbjct: 1045 FDHVFFCEYLYDPAKGSLKQLP----PNIKLRYSAVKGAHVSSLRKNKGKCKEGEDDLDS 1100
Query: 281 -------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE+
Sbjct: 1101 LKSKVNCLATLDIFAGCGGLSEGL----QKSGV-CTTKWAIEYEEAAGDAFKLNHPES 1153
>gi|428179455|gb|EKX48326.1| hypothetical protein GUITHDRAFT_136838 [Guillardia theta CCMP2712]
Length = 715
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 139 DDAYVKA-EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
D AY+K +E YI I E++ES DG+ + W YR+ D + ++ + VFLS
Sbjct: 215 DCAYLKPNKEDEEMYIVLIKEMWESDDGKKEIQGHWIYRSSD--MPKSVEMLHKSEVFLS 272
Query: 198 DVEDDNPLNCIVSKAKIAEVAA-----NMDLEAKQKNIPPC 233
D D NP+ +V +A + + N L AK K++ C
Sbjct: 273 DWVDCNPIESVVQRAPVIFSRSDPKQMNGKLLAKSKDLHIC 313
>gi|402587619|gb|EJW81554.1| hypothetical protein WUBG_07537 [Wuchereria bancrofti]
Length = 617
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 132 GCLYNLGDDAYVKAEEGAVD--YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
G +Y + D AYV E V +I RI L+ DG+ + + W YR E+T +L
Sbjct: 47 GIIYRVNDYAYVAPSEETVSQRHIMRIERLYRDSDGQTFARGTWCYRPEETF-----HLA 101
Query: 190 DRK----RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYY-DMKYTLP 244
RK VFL+ D ++ ++ K + V M K K D+Y + +Y
Sbjct: 102 TRKFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFM--RQKPKGFEDSDIYVCECRYMGR 159
Query: 245 HLTFSNINNESNR 257
L F + + R
Sbjct: 160 QLHFKKLKHWPYR 172
>gi|156363502|ref|XP_001626082.1| predicted protein [Nematostella vectensis]
gi|156212945|gb|EDO33982.1| predicted protein [Nematostella vectensis]
Length = 1541
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT--V 181
++ Q + Y LGD Y++++E + YIAR+ +++ +GE + WF +T +
Sbjct: 1110 YFEQLCIRDMPYKLGDSVYIRSDEDYL-YIARLDKIWTDRNGEGWVHGPWFIGPGETQHL 1168
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ Y + VFLS +E+ +P CI+ K +
Sbjct: 1169 PSKMFY---EQEVFLSSLEEVSPAVCIMGKCMV 1198
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 129 SVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAY 187
S+DG Y LGD YV+ E + ++ I +L+ GE + W+YR E+T +
Sbjct: 913 SLDGNRYQLGDFVYVEPRESNLQPHVVLIEKLWVDTSGEKWLYGNWYYRPEETF-----H 967
Query: 188 LVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
L R K VF SD ++ ++ K + V
Sbjct: 968 LATRKFLEKEVFKSDYFAPAKISKVLGKCHVMSV 1001
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 169 FKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA---EVAANMDLEA 225
K R F+R ED + + A+L D + V+ S P+ I K ++ E+ A + A
Sbjct: 688 LKVRRFFRPED-ISAEKAHLSDIREVYYSTQIVVVPVMAIEGKCEVRKKHELPA-FNAPA 745
Query: 226 KQKNIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTISSETGSNSPIGEPE 280
+ ++I C YD +K L S+ N D A +SE +
Sbjct: 746 EFQHIFFCQSQYDPDTRAIKKLPARLKLSSSENMDT--DEAACRKRTSEC-KGGECDKSR 802
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
++ LD+++GCG +S GL +GV L T+WAI+ A ++ NHP+
Sbjct: 803 LATLDVFAGCGGLSEGL----QQAGVSL-TKWAIEYEEPAGEAFHLNHPD 847
>gi|448332896|ref|ZP_21522116.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
gi|445624740|gb|ELY78115.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
Length = 477
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
++ +DL++G G S GL + SG + +WAID N +A + + NHPE RN D
Sbjct: 46 LTAIDLFAGAGGFSCGL----AHSGFDM--QWAIDFNEYATATYRLNHPEIPHRNIVCSD 99
Query: 341 F 341
Sbjct: 100 I 100
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPET V E +
Sbjct: 1128 LATLDIFAGCGGLSEGL----RQAGVA-TTKWAIEYEHPASEAFNLNHPETNVFCENCNV 1182
Query: 341 FLSLLKE 347
L + E
Sbjct: 1183 ILRCIME 1189
>gi|198417840|ref|XP_002125646.1| PREDICTED: transcription factor protein, partial [Ciona
intestinalis]
Length = 594
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y Q G LGD YV+ G IAR+ L+ ++G +F WF R E T
Sbjct: 34 TYYIQYYAQGMWVKLGDCLYVR-NSGGKPKIARVERLWTDMNGNVWFHGPWFVRPESTE- 91
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + + +FLS +ED ++ + K +
Sbjct: 92 HEPTRMFFKNELFLSSIEDTVLMSDVTGKCMV 123
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 14/80 (17%)
Query: 254 ESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWA 313
ES++ DSD + +S E ++ LD+++GCG +S GL +GV T+WA
Sbjct: 1094 ESDQVDSDKCTKVSKEN---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWA 1139
Query: 314 IDINPHACKSLKFNHPETKV 333
I+ A ++ NHPE V
Sbjct: 1140 IEYEEPAGEAFTKNHPEAAV 1159
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 86 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 145
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 146 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 189
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 489 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 543
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 544 EDCNVLLKLV 553
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 169 FKARWFYRAEDTVI-KDLAYLVDRKRVFLSDVEDDNPLNCIVSK-AKIAEVAANMDLEAK 226
K + YR DT + +D + D V+ SD LN +V K + A + +E
Sbjct: 805 LKVKRIYRPADTHLGRDAGFRSDWNLVYWSDEIHKLELNKVVDKCVLVCSTAIDEPIEEF 864
Query: 227 QKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSE---------TGSNSPIG 277
+ P +Y++ Y F E+ R S + T + P
Sbjct: 865 VRG-GPNRMYFNKAYNPAEREFEPPPVEAERIGSSSKGKGGKSLKSAKSIQPTYPSYPKI 923
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
EP + LD+++GCG +S GL SGV T WAI+ P A ++ + N+P+ V +
Sbjct: 924 EP-LKTLDIFAGCGGLSEGL----HQSGVA-KTYWAIECEPTAAQAFRLNNPDAAVFTDD 977
Query: 338 ADDFLSL 344
+ L +
Sbjct: 978 CNTILKM 984
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE +V + +
Sbjct: 18 LATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAEVFIQNCNV 72
Query: 341 FL 342
FL
Sbjct: 73 FL 74
>gi|24370476|emb|CAC70157.1| polybromodomain protein [Brugia malayi]
Length = 1933
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 132 GCLYNLGDDAYVKAEEGAVD--YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
G +Y + D AYV E V +I RI L+ DG+ + + W YR E+T +L
Sbjct: 966 GIIYRVNDYAYVAPSEETVSQRHIMRIERLYRDSDGQTFARGTWCYRPEETF-----HLA 1020
Query: 190 DRK----RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
RK VFL+ D ++ ++ K + V M K K D+Y
Sbjct: 1021 TRKFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFM--RQKPKGFEDSDIY 1069
>gi|433591426|ref|YP_007280922.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
gi|433306206|gb|AGB32018.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
Length = 751
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
++ +DL++G G S GL + SG + +WAID N +A + + NHPE RN D
Sbjct: 320 LTAIDLFAGAGGFSCGL----AHSGFDM--QWAIDFNEYATATYRLNHPEIPHRNIVCSD 373
Query: 341 F 341
Sbjct: 374 I 374
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
Length = 873
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G+
Sbjct: 5 ISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQM 64
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 65 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 108
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 408 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 462
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 463 EDCNVLLKLV 472
>gi|157117680|ref|XP_001658884.1| polybromo-1 [Aedes aegypti]
gi|108884551|gb|EAT48776.1| AAEL000181-PA [Aedes aegypti]
Length = 1680
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 129 SVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYL 188
+V G + GD YV E G +A+I ++E+ DG+ +F+ W + V ++ L
Sbjct: 1105 TVCGGVVKTGDYVYVATETGK-QSVAQIQSIWETKDGKSFFRGPWLLTPPE-VPGTISRL 1162
Query: 189 VDRKRVFLSDVEDDNPLNCIVSKAKIAE 216
R+ V LS V++ P IV + + E
Sbjct: 1163 FYRQEVMLSTVQETTPTVAIVGRCAVLE 1190
>gi|24370475|emb|CAC70156.1| polybromodomain protein [Brugia malayi]
Length = 1864
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 13/111 (11%)
Query: 132 GCLYNLGDDAYVKAEEGAVD--YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
G +Y + D AYV E V +I RI L+ DG+ + + W YR E+T +L
Sbjct: 966 GIIYRVNDYAYVAPSEETVSQRHIMRIERLYRDSDGQTFARGTWCYRPEETF-----HLA 1020
Query: 190 DRK----RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
RK VFL+ D ++ ++ K + V M K K D+Y
Sbjct: 1021 TRKFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFM--RQKPKGFEDSDIY 1069
>gi|170596895|ref|XP_001902936.1| polybromodomain protein [Brugia malayi]
gi|158589073|gb|EDP28215.1| polybromodomain protein, putative [Brugia malayi]
Length = 1057
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 132 GCLYNLGDDAYVKAEEGAVD--YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
G +Y + D AYV E V +I RI L+ DG+ + + W YR E+T +L
Sbjct: 539 GIIYRVNDYAYVAPSEETVSQRHIMRIERLYRDSDGQTFARGTWCYRPEETF-----HLA 593
Query: 190 DRK----RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYY-DMKYTLP 244
RK VFL+ D ++ ++ K + V M K K D+Y + +Y
Sbjct: 594 TRKFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFM--RQKPKGFEDSDIYVCECRYMGR 651
Query: 245 HLTFSNINN 253
L F + +
Sbjct: 652 QLHFKKLKH 660
>gi|448343463|ref|ZP_21532402.1| DNA-cytosine methyltransferase [Natrinema gari JCM 14663]
gi|445623525|gb|ELY76931.1| DNA-cytosine methyltransferase [Natrinema gari JCM 14663]
Length = 668
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339
E +++DL+SG G +S GL RWAIDI+ A + + NHPE RN
Sbjct: 237 EPTVVDLFSGAGGLSCGL------RQADYDIRWAIDIDTDAVATYRLNHPEIPHRNVVCG 290
Query: 340 D 340
D
Sbjct: 291 D 291
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
L+L+SG G + TGL +SG + TRWA++ +P A + + NH T V N+ + L
Sbjct: 761 LELFSGAGGLGTGL----DMSGF-VETRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLL 814
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
L+L+SG G + TGL +SG + TRWA++ +P A + + NH T V N+ + L
Sbjct: 813 LELFSGAGGLGTGL----DMSGF-VETRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLL 866
>gi|167999933|ref|XP_001752671.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696202|gb|EDQ82542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED---TV 181
Y +G YNL D A+++++ +I +++ L+E G P + RWF+RA + T+
Sbjct: 111 YESMLYNGIRYNLYDCAFIRSDL-VEPHIGKLMRLYEE-GGRPMIRVRWFFRAAELPSTM 168
Query: 182 IKDLAYLV---DRKRVF-----LSDVEDDNPLNCIVSKAKI 214
IK L D K +F L VE++N + I+ KA++
Sbjct: 169 IKVLGQETLQEDPKELFIAQGNLKGVENENVVEVILGKARV 209
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 132 GCLYNLGDDAYVKAEEGA--VDYIARI---VELFESVDGEPYFKARWFYRAEDTVIKDLA 186
G Y++ D +KA+EG V ++ I L ES EP K + F R + ++
Sbjct: 574 GVSYHINDFVLIKAKEGPCHVGHLTSISFPTRLRES--DEPSVKVKLFGRMDKLGLRPHN 631
Query: 187 YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHL 246
+ D + +F +D E + L+ ++ + V + L + + ++ ++Y P L
Sbjct: 632 IIKDERHLFATDDEMEVVLSDLLG---LCFVYPHNSLPDPRAWLLAAPNHFFVRYHFPSL 688
Query: 247 TFSNINNESNRRDSDASSTISSETGSNSPIGEPE-------------MSLLDLYSGCGAM 293
++ + + RRD + + +T + + + D + G GA
Sbjct: 689 ---DVRSWNQRRDMEPHELLICKTCVQENLDKHNTLKEFMSNARRRPLRAFDPFGGSGAF 745
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 349
GL SG VT A++I+P A +++K N P+T V N+ A+ L +WA
Sbjct: 746 GLGL----EESGCIKVTH-AVEISPSAARTMKRNCPDTTVYNQCANKIL----QWA 792
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD++SGCG +S GL +GV T+WAI+ A ++ K NHPE+ V
Sbjct: 1106 LATLDIFSGCGGLSEGL----QQAGVS-STKWAIEYEEPAGEAFKLNHPESLV 1153
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK- 228
+ R F+R ED + D AY D + V+ S+ ++ I K EV DL ++
Sbjct: 1003 QVRRFFRPEDLSL-DKAYRSDIQEVYYSEEVHKLAVSSIEGKC---EVRRKKDLSSQNTT 1058
Query: 229 ----NIPPCDLYYD------------MKYTLPHLTFSNINNESNRRDSDASSTISSETGS 272
++ C+ YD +K + P T +N R+ E
Sbjct: 1059 YITDHVFFCERLYDPTKGSLKQLPVNIKLSPPKETPANEAAIRKRKGKSKEGEDDVEMTE 1118
Query: 273 NS-PIGEPEMSLLDLYSGCGAMSTGLC-IGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
N + + + LD+++GCG +S GL GAS VT+WAI+ A + + NHPE
Sbjct: 1119 NKDSVSKNILKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPE 1172
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 170 KARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK- 228
+ R F+R ED + D AY D + V+ S+ ++ I K EV DL ++
Sbjct: 982 QVRRFFRPEDLSL-DKAYQSDIQEVYYSEEVHKLAVSSIEGKC---EVRRKKDLSSQNTT 1037
Query: 229 ----NIPPCDLYYD------------MKYTLPHLTFSNINNESNRRDSDASSTISSETGS 272
++ C+ YD +K + P T +N R+ E
Sbjct: 1038 YITDHVFFCERLYDPTKGSLKQLPVNIKLSPPKETPANEAAIRKRKGKSKEGEDDVEMTE 1097
Query: 273 NS-PIGEPEMSLLDLYSGCGAMSTGLC-IGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
N + + + LD+++GCG +S GL GAS VT+WAI+ A + + NHPE
Sbjct: 1098 NKDSVSKIILKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPE 1151
>gi|242000040|ref|XP_002434663.1| polybromo-1, putative [Ixodes scapularis]
gi|215497993|gb|EEC07487.1| polybromo-1, putative [Ixodes scapularis]
Length = 1572
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 123 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y Q ++ ++ LGD YV+ E I RI +++ +G ++ WF + +
Sbjct: 1089 TYYEQLNLPSGVFKLGDCCYVRTEHSKT-LIGRIDKMWMDREGNGFYHGPWFVLPGE-IQ 1146
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
+ + R+ V LS +ED NPL I+ +
Sbjct: 1147 HPASRVFYRQEVLLSSIEDTNPLLSIMGR 1175
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 132 GCLYNLGDDAYVKA-EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV-IKDLAYLV 189
G + +GD YV+ E+G +I + L+ +G+ + WFYR +T + +L
Sbjct: 899 GIVIRVGDFVYVEPREKGMQPHITNVDRLWRDKNGDQWLYGCWFYRPNETFHLASRKFL- 957
Query: 190 DRKRVFLSDVEDDNPLNCIVSKAKIAEV 217
+K VF SD + P+N ++ K + V
Sbjct: 958 -QKEVFKSDNYNSTPVNQVLGKCYVMPV 984
>gi|366986805|ref|XP_003673169.1| hypothetical protein NCAS_0A02200 [Naumovozyma castellii CBS 4309]
gi|342299032|emb|CCC66778.1| hypothetical protein NCAS_0A02200 [Naumovozyma castellii CBS 4309]
Length = 894
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAE 178
AR + +G YN+GD +K + + +I L+++ DGE + A W+YR E
Sbjct: 390 HARMPMDSVNFNGVTYNIGDWVLIKNPNDPNKPIVGQIFRLWKTSDGEEWLNACWYYRPE 449
Query: 179 DTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
TV + + L + V + DN + IVSK
Sbjct: 450 QTVHR-VDRLFYKNEVMKTGQYRDNLVKDIVSK 481
>gi|327265801|ref|XP_003217696.1| PREDICTED: protein polybromo-1-like isoform 3 [Anolis carolinensis]
Length = 1599
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELF 160
V +G+SS+ R + S +Y++GD YV+ AE +I I L+
Sbjct: 904 VGSGLSSL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW 952
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAE 216
E GE + WFYR +T +L R K VF SD + P+N I+ K +
Sbjct: 953 EDSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVNKILGKCVVMF 1007
Query: 217 V 217
V
Sbjct: 1008 V 1008
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1114 CHYYEQLCYNDLWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1172
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1173 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1204
>gi|156549014|ref|XP_001607336.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1682
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 41/211 (19%)
Query: 142 YVKAEEGAVDY---------IARIVELFESVDGEPYFKARWFYRAEDTVIKD-LAYLVDR 191
Y KAE+ +D I I E+F + + Y K + YR E+T + L D
Sbjct: 1085 YRKAEDAVIDSKFDMPAPFDIGYITEIFTT--DKLYIKVKKLYRPENTHRNEVLIKQNDM 1142
Query: 192 KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP-----CDLYYDMKYTLPHL 246
++ S+ N +V K +A + + N+ P +Y+D K+T
Sbjct: 1143 NMLYWSNEVCTVSFNYVVRKCYVAHIKDFSKSVEEWSNLGPDRFYFMQMYHDKKFT---- 1198
Query: 247 TFSNINNESNRRDSDASSTISSETGSNSPIGEPE---MSLLDLYSGCGAMSTGLCIGASL 303
D + + + + PI P+ M+ L++++GCG GL +G
Sbjct: 1199 ------------DIERNMYGCEDVPLDPPIDYPDVDAMTSLEIFAGCG----GLSLGLRE 1242
Query: 304 SGV-KLVTRWAIDINPHACKSLKFNHPETKV 333
SGV K + WAI+ + A + + N+P+ V
Sbjct: 1243 SGVIKKLGSWAIESDVDAANTFQLNNPDITV 1273
>gi|145540694|ref|XP_001456036.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423846|emb|CAK88639.1| unnamed protein product [Paramecium tetraurelia]
Length = 234
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGE----PYFKARWFY 175
++R Y Q +G +Y +G + +KA+ +DY+A+++++ + VD + P K +W+Y
Sbjct: 49 KSRTSYKQLKYEGIIYKIGQNLCIKADRR-IDYVAKLLKIVKLVDNDDEVYPLIKVQWYY 107
Query: 176 R 176
R
Sbjct: 108 R 108
>gi|327265797|ref|XP_003217694.1| PREDICTED: protein polybromo-1-like isoform 1 [Anolis carolinensis]
Length = 1631
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELF 160
V +G+SS+ R + S +Y++GD YV+ AE +I I L+
Sbjct: 936 VGSGLSSL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW 984
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAE 216
E GE + WFYR +T +L R K VF SD + P+N I+ K +
Sbjct: 985 EDSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVNKILGKCVVMF 1039
Query: 217 V 217
V
Sbjct: 1040 V 1040
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1146 CHYYEQLCYNDLWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1204
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1205 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1236
>gi|327265799|ref|XP_003217695.1| PREDICTED: protein polybromo-1-like isoform 2 [Anolis carolinensis]
Length = 1582
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 102 VAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELF 160
V +G+SS+ R + S +Y++GD YV+ AE +I I L+
Sbjct: 936 VGSGLSSL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW 984
Query: 161 ESVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAE 216
E GE + WFYR +T +L R K VF SD + P+N I+ K +
Sbjct: 985 EDSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVNKILGKCVVMF 1039
Query: 217 V 217
V
Sbjct: 1040 V 1040
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1146 CHYYEQLCYNDLWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1204
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1205 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1236
>gi|289625247|ref|ZP_06458201.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|422580026|ref|ZP_16655533.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330870468|gb|EGH05177.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 647
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 94 SKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYI 153
S G+ K + A S + A ++++ Q YTQ L D Y + G V
Sbjct: 279 SYGNNKAAIQAISSGLAAAQQKDQ--QTSGQYTQWQTLDQLRQTSADLYARHHGGGVPLS 336
Query: 154 ARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVE 200
R+ L++ D EPY + R+F R E ++K A + R LS ++
Sbjct: 337 MRL-GLYKGYDVEPYLRQRYFARLESVMLKPTADNLTRSLYLLSSIK 382
>gi|297813627|ref|XP_002874697.1| hypothetical protein ARALYDRAFT_911498 [Arabidopsis lyrata subsp.
lyrata]
gi|297320534|gb|EFH50956.1| hypothetical protein ARALYDRAFT_911498 [Arabidopsis lyrata subsp.
lyrata]
Length = 587
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R H+ Q + DG Y+L D + E+ + Y+A I ++ ++ DG +WFYR E+
Sbjct: 118 RTHFKQFAYDGNTYDLEDPVLLVPEDKSQKPYVAIIKDITQTKDGSMMILGQWFYRPEEA 177
Query: 181 VIKDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
+ D + +F S D+ P ++ + + V A+ L K+KN P
Sbjct: 178 EKRGGGNWQSSDTRELFYSFHRDEVPAESVMHRCVVYFVPAHKQL-PKRKNNP 229
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1021 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1075
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1076 NVLLKLV 1082
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y + V+ + +GD V ++ + Y+ARI L++ DGE F A WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + D +FL D +D L+ I K +
Sbjct: 684 GESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>gi|289647908|ref|ZP_06479251.1| OmpA/MotB, partial [Pseudomonas syringae pv. aesculi str. 2250]
Length = 656
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 94 SKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYI 153
S G+ K + A S + A ++++ Q YTQ L D Y + G V
Sbjct: 288 SYGNNKAAIQAISSGLAAAQQKDQ--QTSGQYTQWQTLDQLRQTSADLYARHHGGGVPLS 345
Query: 154 ARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVE 200
R+ L++ D EPY + R+F R E ++K A + R LS ++
Sbjct: 346 MRL-GLYKGYDVEPYLRQRYFARLESVMLKPTADNLTRSLYLLSSIK 391
>gi|198430517|ref|XP_002128135.1| PREDICTED: similar to DNA methyltransferase 2 [Ciona intestinalis]
Length = 343
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
EPE+ +L+LYSG G M L +GA+L ++V ++DI+P A K N P TK +
Sbjct: 2 EPELKVLELYSGIGGMHYAL-LGANLKNCEVVC--SVDISPAASLVYKHNFPGTKHWERS 58
Query: 338 ADDF 341
+ F
Sbjct: 59 IEGF 62
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1021 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1075
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1076 NVLLKLV 1082
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y + V+ + +GD V ++ + Y+ARI L++ DGE F A WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + D +FL D +D L+ I K +
Sbjct: 684 GESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>gi|156060059|ref|XP_001595952.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980]
gi|154699576|gb|EDN99314.1| hypothetical protein SS1G_02167 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 405
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339
+++ LD++SG G +S G SGV + T++ I+++ A K+LK N P+ V N A+
Sbjct: 264 KLTTLDIFSGAGGLSQGF----HESGV-VGTKYVIELDTAAAKTLKRNFPDAIVYNHDAN 318
Query: 340 DFLSLLKEWA 349
FL EW
Sbjct: 319 KFL----EWV 324
>gi|356495684|ref|XP_003516704.1| PREDICTED: uncharacterized protein LOC100776280 [Glycine max]
Length = 747
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
HY DG Y L D + EE G Y+A I ++ +S+ G +WFYR E+
Sbjct: 309 HYDSFEFDGIQYILEDPVLLVPEEKGQKPYVAIIKDITQSISGNVKVTGQWFYRPEEAEK 368
Query: 183 KDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
K D + +F S DD P ++ K + V + L K+K+ P
Sbjct: 369 KGGGNWQSCDTRELFYSFHRDDVPAEAVMHKCVVHFVPRHKQL-PKRKDHP 418
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1024 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1078
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1079 NVLLKLV 1085
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
Y+ARI L+E DGE F A WF R DTV+ + + D +FL D +D L+ + K
Sbjct: 658 YLARITALWE--DGEKMFHAHWFCRGTDTVLGESS---DPLELFLVDECEDMQLSFVHGK 712
Query: 212 AKI 214
+
Sbjct: 713 VNV 715
>gi|307207938|gb|EFN85497.1| Protein polybromo-1 [Harpegnathos saltator]
Length = 1647
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA+I L+ + DG+ YFK W + V
Sbjct: 1111 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQIDALWSTKDGKCYFKGPWLLMPTE-VPH 1168
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYDMK 240
L ++ +FLS V+ +P+ IV K+ + +E + E + ++ C+ YD
Sbjct: 1169 TPTKLFYKQELFLSTVDGTHPIVAIVGKSAVLDYSEYICSRPTEIPEDDVYICESLYDES 1228
Query: 241 YTLPHLTFSNINNESNRRDSDASSTISSE 269
+L +N E ++ + S+ E
Sbjct: 1229 KSL----MKKLNQEGLKKFNHTSTVTEDE 1253
>gi|345007263|ref|YP_004810115.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
gi|344322889|gb|AEN07742.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
Length = 598
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
+++DL+SG G +S GL +G + RWAIDI+ A + + NHPE +N D
Sbjct: 169 TVVDLFSGAGGLSCGL----RQAGYDI--RWAIDIDTDAVATYRLNHPEIPHQNVVCGD 221
>gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
Length = 401
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 283 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+LDL+SGCG + G +G + +++I+ AC + KFNHPET+V
Sbjct: 4 VLDLFSGCGGLGEGFL----QAGFDIAA--SVEIDEKACATQKFNHPETQV 48
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1012 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDC 1066
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1067 NILLKLV 1073
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+++ LD+++GCG +S GL SGV T+WAI+ A ++ NHPE V
Sbjct: 25 QLATLDIFAGCGGLSEGL----ERSGVS-QTKWAIEYEEPAGEAFNLNHPEASV 73
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +GV T WAI++ A ++ + N+P T V E
Sbjct: 1052 PKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1106
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1107 NVLLKLV 1113
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1012 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDC 1066
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1067 NILLKLV 1073
>gi|145346300|ref|XP_001417630.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577857|gb|ABO95923.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 784
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
++ARI ++E +GE F ARW+ E+T + + R+ VFL+ D NP++C+
Sbjct: 190 HLARIEHIWEE-NGEYQFAARWYALPEETHMGRQP-IQHRREVFLTHNVDVNPVDCLFRV 247
Query: 212 AKIAEVAANMDLEAKQKNIPPCDLYYDMKY 241
AK+ D E + C+ YD +
Sbjct: 248 AKVCTPQEFRDQEEGSHDTYVCEYTYDTAF 277
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1014 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDC 1068
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1069 NVLLKLV 1075
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
Y + S+D + +GD V + Y+ARI ++E G P F A WF DTV
Sbjct: 623 YLKVSIDSEILEVGDCVSVSPDNPTEPLYLARITSMWEDACG-PMFHAHWFCLGTDTV-- 679
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
L D +FL D +D L+ I K K+
Sbjct: 680 -LGATSDPLELFLVDECEDMQLSYIHGKVKV 709
>gi|332018144|gb|EGI58753.1| Protein polybromo-1 [Acromyrmex echinatior]
Length = 1646
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q S GD YV A +G IA++ ++ + DG+ YFK W D V
Sbjct: 1108 YYEQYSTCAGSVKTGDFVYV-ATDGGRQQIAQVDAIWLTKDGKCYFKGPWLLMPTD-VPH 1165
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1166 TPTKLFYKQELFLSTVDGTHPIVAIVGKCSVLDYGEYICSRPTEIPEDDVYICESLYD 1223
>gi|228950066|ref|ZP_04112251.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228809593|gb|EEM56029.1| DNA-cytosine methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 445
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 283 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE-----A 337
++ +++GCG + TG S + AI+++P AC + K NHPET+V N
Sbjct: 15 VIGIFAGCGGLDTGF------SKSDFNVQLAIELDPDACNTYKKNHPETEVWNRDIKTVK 68
Query: 338 ADDFLSLLKEWAKL------CQYFSIY 358
D+ L+ + CQ FSI+
Sbjct: 69 GDEIRKLVGNKPLILLGGSPCQSFSIF 95
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
E ++ LD+++GCG +S GL +GV VT+WAI+ A ++ NHPE
Sbjct: 1079 ENRLATLDIFAGCGGLSEGL----QQAGVS-VTKWAIEYEEPAGEAFSLNHPE 1126
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1014 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDC 1068
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1069 NVLLKLV 1075
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R Y + S+D + +GD V + Y+ARI ++E G P F A WF DT
Sbjct: 619 REFYLKVSIDAEVLEVGDCVSVSPDNPTEPLYLARITSMWEDACG-PMFHAHWFCLGTDT 677
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I K +
Sbjct: 678 V---LGATSDPLELFLVDECEDMQLSYIHGKVTV 708
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
+ LDL+ G GA S GL G+ L A++I P A K+L+ N P T V N+ A+
Sbjct: 747 LPTLDLFGGVGAFSKGLAEGSEC----LRVTHAVEIGPSAAKTLERNSPGTIVYNQCANT 802
Query: 341 FL 342
L
Sbjct: 803 ML 804
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S G+ +GV TRWAI+ + A ++ K N+P+ KV
Sbjct: 1741 QLDTLDIFAGCGGLSEGM----HQAGVAR-TRWAIEYDSEAAEAYKLNNPDAKV 1789
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 91 KYSSKGHK-----KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 145
K + KG K KKK A V+ L+E EV + R +Y A +D +GD +
Sbjct: 699 KKAKKGRKLETPLKKKKRAKVT---WLDEPTEVTEERAYYKAAMLDDEKIEIGDCVLIHP 755
Query: 146 EEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
++ ++AR++ +++ GE F A+WF +TV+ + + D VF D D
Sbjct: 756 DDPTKPLFMARVIYMWQESQGEMMFHAQWFVYGSETVLGETS---DPLEVFPIDECQDTY 812
Query: 205 LNCIVSKAKI 214
L + +K +
Sbjct: 813 LGSVNAKCTV 822
>gi|353240447|emb|CCA72316.1| related to cytosine-specific methyltransferase EC=2.1.1.37-Laccaria
bicolor [Piriformospora indica DSM 11827]
Length = 1301
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 271 GSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
G+N+ G +M+ LDL+SG G GL +G +++G L +WA++ + A ++ + N P+
Sbjct: 818 GANASTGT-QMNTLDLFSGAG----GLALGVTMTGA-LAVKWAVEKSIPASQTFRRNFPD 871
Query: 331 TKV 333
+V
Sbjct: 872 AQV 874
>gi|392584764|gb|EIW74107.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1153
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
L+L+ G G + TGL +SG + T+WA DI+P + K+ NHP V N+ L
Sbjct: 640 LELFCGAGGLGTGL----EMSGF-VDTKWAADISPSSTKTFGSNHPNAIVYNQCTSLLL 693
>gi|15236393|ref|NP_194043.1| Bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
gi|3021264|emb|CAA18459.1| putative protein [Arabidopsis thaliana]
gi|3292838|emb|CAA19828.1| putative protein [Arabidopsis thaliana]
gi|7269159|emb|CAB79267.1| putative protein [Arabidopsis thaliana]
gi|332659311|gb|AEE84711.1| Bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
Length = 360
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 19/150 (12%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELF-ESVDGEPYFKARWFYRAE 178
+ +CHY Y L D + E+G Y+A I +++ + +G + +W YR E
Sbjct: 44 KKKCHYKTFQFHANKYGLEDSVLLVPEDGEKPYVAIIKDIYTQRKEGHVKLEVQWLYRPE 103
Query: 179 DTVIK-----------DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQ 227
+ K DL Y R VF V+DD CIV + + N K
Sbjct: 104 EVEKKYVGNWKSKGSRDLFYSFHRDEVFAESVKDD----CIVHFVQENKQIPN---RRKH 156
Query: 228 KNIPPCDLYYDMKYTLPHLTFSNINNESNR 257
+Y ++K L LTF+ + + R
Sbjct: 157 PGFIVQHVYDNVKKKLRKLTFNGFDLQQKR 186
>gi|390365783|ref|XP_796375.3| PREDICTED: protein polybromo-1 [Strongylocentrotus purpuratus]
Length = 1911
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 114 EEEEVLQ------ARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEP 167
E E+VLQ +Y Q +G Y LGD Y+K +G +I R+ ++++ GE
Sbjct: 1181 EREDVLQEGAGDGGLVYYEQVCWNGVFYKLGDAVYIKTIKGR-PHICRMDKIWKIGTGET 1239
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA---EVAANMDLE 224
+F F +TV + + VFLS VE+ + I+ K + + +N E
Sbjct: 1240 FFFGPVFIHPSETV-HPPTKMFYQNEVFLSCVEESYGMVHILGKCSLMLFKDYISNRPTE 1298
Query: 225 AKQKNIPPCDLYY 237
+K++ C+ Y
Sbjct: 1299 FAEKHVYVCESQY 1311
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1007 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1061
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1062 NVLLKLV 1068
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1035 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1089
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1090 NVLLKLV 1096
>gi|440637050|gb|ELR06969.1| hypothetical protein GMDG_08203 [Geomyces destructans 20631-21]
Length = 1141
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 33/158 (20%)
Query: 196 LSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNES 255
+ D+ D+ P S+ IAE +++ + DL T+P L+F ++ +
Sbjct: 746 MVDLTDEFPKTPTKSRLSIAEAT-------QERMLSQIDL------TMPELSFPP-SDGT 791
Query: 256 NRRDSDAS---STISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRW 312
R S AS +TI G G D + G G G GA ++G+K++ W
Sbjct: 792 VRATSAASKLKTTIKRVEGQMCTYG-------DAFCGAG----GATRGAHMAGLKVI--W 838
Query: 313 AIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAK 350
D N HAC++ + N P + +A D L WAK
Sbjct: 839 GFDFNAHACETWRLNFPSATMYEMSAFDVCHL---WAK 873
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S G+ +GV TRWAI+ + A ++ K N+P+ KV
Sbjct: 1756 QLDTLDIFAGCGGLSEGM----HQAGVAR-TRWAIEYDSEAAEAYKLNNPDAKV 1804
>gi|422598801|ref|ZP_16673056.1| OmpA/MotB [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330989073|gb|EGH87176.1| OmpA/MotB [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 831
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 94 SKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYI 153
S G+ K + A S + A ++++ Q YTQ L D Y + G V
Sbjct: 463 SYGNNKAAIQAISSGLAAAQQKDQ--QTSGQYTQWQTLDQLRQTSADLYARHHGGGVPLS 520
Query: 154 ARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVE 200
R+ L++ D EPY + R+F R E ++K A + R LS ++
Sbjct: 521 MRL-GLYKGYDVEPYVRQRYFARLESVMLKPTADNLTRSLYLLSSIK 566
>gi|152001063|gb|AAI46631.1| LOC100125670 protein [Xenopus laevis]
Length = 1117
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 120 QARCHYTQASVDGC-LYNLGDDA-YVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+AR + +A V G ++GD A ++ A + YI RI ++ES G K +WFY
Sbjct: 977 KARKLFYKAIVRGKETLHVGDCAVFLSAGRPNLPYIGRIESMWESWGGNMVVKVKWFYHP 1036
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYY 237
E+T + + + ++ S ED+N + I K ++ L ++ + +LYY
Sbjct: 1037 EETKLGK-RHSDGKNALYQSSHEDENDIQTISHKCQVVSRQQYDKLSHNKRYLDRQNLYY 1095
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 98 KKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARI 156
+KK+ ++ IG E Q +Y + S++ L +GD V +E+ ++ Y+ARI
Sbjct: 604 RKKQTQCKLTWIGESIHTEGKKQ---YYRKVSLNDELLEVGDCVSVSSEDPSIPLYLARI 660
Query: 157 VELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
++E +G+ F A WF R DTV+ + + D + + D +D LN + K +
Sbjct: 661 TSMWEDNNGK-MFHAHWFLRGIDTVLGETS---DPLELVIVDECEDMLLNYVQGKVNV 714
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P+ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1025 PKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1079
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1080 NVLLKLV 1086
>gi|340620812|ref|YP_004739263.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
gi|339901077|gb|AEK22156.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
Length = 358
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+D++SG G GL +GA ++G+++ + I+INP A KS NH KV
Sbjct: 5 IDIFSGAG----GLSLGAEMAGIQI--SYGIEINPSAAKSFTRNHKGAKV 48
>gi|226228975|ref|YP_002763081.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27]
gi|226092166|dbj|BAH40611.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27]
Length = 407
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 270 TGSNSPIG--EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN 327
T S IG + E+ ++DL+SGCGAMS G+ + G ++V A+D N A + + N
Sbjct: 50 TTSRPRIGARQREVRVVDLFSGCGAMSLGIWEASRAIGARMVPVMALDFNDKALRVYEDN 109
Query: 328 HP 329
P
Sbjct: 110 FP 111
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 343
LD+++GCG +S GL SG+ +++ WAI+ + A + K N+PE V E + L
Sbjct: 765 LDIFAGCGGLSRGL----EDSGL-VISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLK 819
Query: 344 L 344
L
Sbjct: 820 L 820
>gi|432090830|gb|ELK24129.1| Protein polybromo-1 [Myotis davidii]
Length = 1729
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 977 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPSEASLQPHIVCIERLWE 1025
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1026 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1080
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1185 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1243
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1244 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1275
>gi|393908221|gb|EJD74959.1| polybromodomain protein [Loa loa]
Length = 1841
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 132 GCLYNLGDDAYVK-AEEGAVD--YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYL 188
G +Y + D AYV A E V +I RI L+ DG+ + + W YR E+T +L
Sbjct: 1007 GVIYRVNDYAYVAPASEETVSQRHIMRIERLYRDSDGQTFARGTWCYRPEETF-----HL 1061
Query: 189 VDRK----RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
RK VFL+ D ++ ++ K + V M K K D+Y
Sbjct: 1062 ATRKFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFM--RQKPKGFDDSDIY 1111
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 111/295 (37%), Gaps = 71/295 (24%)
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV----------------------- 150
E+ E L R Y+ A+ DG Y +GD Y+ E
Sbjct: 915 EQLEDLDGRVLYSSATKDGVQYRVGDGVYLLPEAFTFNIKLSSPVKRPRKEPVDEDLYPE 974
Query: 151 ------DYI-------------ARIVELF--ESVDGEP-----YFKARWFYRAEDTVIKD 184
DYI RI E+F + +G P + FYR E+T
Sbjct: 975 HYRKYSDYIKGSNLDAPEPYRIGRIKEIFCIKKSNGRPNETDIKIRLNKFYRPENTHKST 1034
Query: 185 LA-YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMD--LEAKQKNIPPCDLYYDMK- 240
A Y D ++ SD E + + + E + ++ L+A P D +Y ++
Sbjct: 1035 PATYHADINLLYWSDEEAVVDFKAVQGRCTV-EYSEDLPECLQAFSAGGP--DRFYFLEA 1091
Query: 241 YTLPHLTFSNINNESN----------RRDSDASSTISSETGSNSPIGEPEMSLLDLYSGC 290
Y +F + N + + A S + + + I P++ LD++SGC
Sbjct: 1092 YNAKSKSFEDPPNHARSPGNKGKGKGKGKGKAKSQVCEPSEPKAEIKLPKLRTLDVFSGC 1151
Query: 291 GAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
G +S G +G+ T WAI++ A ++ + N+P + V E + L L+
Sbjct: 1152 GGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1201
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
Y Q +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 750 YKQVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTV-- 807
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
L D +FL D +D L+ I SK K+
Sbjct: 808 -LGATSDPLELFLVDECEDMQLSYIHSKVKV 837
>gi|406866260|gb|EKD19300.1| BAH domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1679
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 131 DGCLYNLGDDAYVKAE-EGAVDYIARIVELFESVDGEP-----YFKARWFYRAEDTVIKD 184
DG ++ + D AY+ E G Y+ RI+E F V+ +P + W+YRA+D + K
Sbjct: 254 DGTVFEVNDHAYLVCEPPGEPYYLGRIME-FLHVNNDPKQPIDALRLNWYYRAKD-IGKS 311
Query: 185 LAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
++ D +++F S D +PL + K +I
Sbjct: 312 IS---DTRQIFASMHSDVSPLTALRGKCQI 338
>gi|313233073|emb|CBY24184.1| unnamed protein product [Oikopleura dioica]
Length = 1036
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 113 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDY-IARIVELFESVDGEPYFKA 171
NE E+++ R DG Y +GD AY+ + V Y I++I E+ + G+P F
Sbjct: 58 NERGEIVEYRHD------DGQAYKVGDAAYITTQRSDVPYVISKISEIKVTKSGKPEFVC 111
Query: 172 RWFYRAEDTVIKDLAY---LVDRKRVFLSD 198
R F+R +D + D Y +DR++ F +D
Sbjct: 112 RPFHRPDD--LPDQIYQKLTLDREKEFSAD 139
>gi|409721314|ref|ZP_11269516.1| DNA-cytosine methyltransferase [Halococcus hamelinensis 100A6]
gi|448722001|ref|ZP_21704542.1| DNA-cytosine methyltransferase [Halococcus hamelinensis 100A6]
gi|445790404|gb|EMA41066.1| DNA-cytosine methyltransferase [Halococcus hamelinensis 100A6]
Length = 598
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
+++DL+SG G +S GL +G + WAIDIN A + + NHPE +N D
Sbjct: 169 TVVDLFSGAGGLSCGL----RRAGYDI--EWAIDINTDAVATYRLNHPEIPHQNVVCGD 221
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 172 RWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQKN 229
R YR +D + AY D + V+ S+ P+ I K ++ + +L +
Sbjct: 973 RRLYRPDD-ISSARAYSSDIREVYYSEDMLSVPVAMIEGKCEVTTKNNLPDSNLPVVVDH 1031
Query: 230 IPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTI--SSETGSN---SPIGEP 279
+ C+ YD +K ++ I ++ + I S + GS+ + E
Sbjct: 1032 VFYCEYLYDPDTGALKQLQSNVKLMTIARKAPTSKKNKGKQICDSDQAGSDKQKAAASEN 1091
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL LSG T+WAI+ A ++ NHPE V
Sbjct: 1092 SLATLDIFAGCGGLSEGL----QLSGASH-TKWAIEYEEPAGQAFGENHPEAAV 1140
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV-RNEAADDFL 342
+D++SG G GL +GA ++G+++ + I+INP A KS NH KV + + D
Sbjct: 5 IDIFSGAG----GLSLGAEMAGIQIC--YGIEINPSAAKSFTRNHKGAKVLQGDIKDIDP 58
Query: 343 SLLKE---------WAKLCQYFSIYDT 360
S LKE CQ FS+ +T
Sbjct: 59 SKLKEGIDPVFIIMGGPPCQGFSLSNT 85
>gi|170042166|ref|XP_001848807.1| polybromo-1 [Culex quinquefasciatus]
gi|167865675|gb|EDS29058.1| polybromo-1 [Culex quinquefasciatus]
Length = 1687
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 138 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
GD YV A EG +A+I ++E+ D + +F+ W + V ++ L R+ + LS
Sbjct: 1115 GDFVYV-ATEGGKQSVAQIQSIWETKDNKSFFRGPWLLTPPE-VPGTISKLFYRQEMLLS 1172
Query: 198 DVEDDNPLNCIVSKAKIA---EVAANMDLEAKQKNIPPCDLYYD-MKYTLPHLTFSNINN 253
V++ P IV + + E E + ++ C+ YD MK + + N+
Sbjct: 1173 TVQETTPTVAIVGRCAVLEHHEYITRRPTEIAEPDVFLCESIYDEMKKQIRKVVPGNL-- 1230
Query: 254 ESNRRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGL 297
R + + T PI P++S ++ +G + GL
Sbjct: 1231 --KRFNHTQAVTTDEIFFFRRPINPPKVSCGEILAGQENRTLGL 1272
>gi|414878927|tpg|DAA56058.1| TPA: hypothetical protein ZEAMMB73_088858 [Zea mays]
Length = 257
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVEL 159
+EEE L+ARCHY VD +Y L DD YVK A +I ++ L
Sbjct: 147 DEEEGLKARCHYRSDKVDNVVYCLEDDVYVKVSGAADPFIHQLQSL 192
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 261 DASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHA 320
+A +S + I P++ LD++SGCG +S G +G+ T WAI++ A
Sbjct: 1115 NAKCQVSEPKEPETAIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPA 1169
Query: 321 CKSLKFNHPETKVRNEAADDFLSLL 345
++ + N+P + V E + L L+
Sbjct: 1170 AQAFRLNNPSSTVFTEDCNVLLKLV 1194
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 261 DASSTISSETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHA 320
+A +S + I P++ LD++SGCG +S G +G+ T WAI++ A
Sbjct: 1124 NAKCQVSEPKEPETAIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPA 1178
Query: 321 CKSLKFNHPETKVRNEAADDFLSLL 345
++ + N+P + V E + L L+
Sbjct: 1179 AQAFRLNNPSSTVFTEDCNVLLKLV 1203
>gi|345786738|ref|XP_533797.3| PREDICTED: protein polybromo-1 isoform 1 [Canis lupus familiaris]
Length = 1602
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 902 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 953
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 954 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1008
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1113 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1171
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1172 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1203
>gi|281338032|gb|EFB13616.1| hypothetical protein PANDA_007574 [Ailuropoda melanoleuca]
Length = 1688
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 936 AAGLSGL-----------QRTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
+ +D++SGCG +S GLC A L V RWAID P A +LK NH
Sbjct: 276 LHTMDVFSGCGGLSLGLC-DAGLCDV----RWAIDNWPVALDALKANH 318
>gi|312075197|ref|XP_003140310.1| hypothetical protein LOAG_04725 [Loa loa]
Length = 1503
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 132 GCLYNLGDDAYVK-AEEGAVD--YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYL 188
G +Y + D AYV A E V +I RI L+ DG+ + + W YR E+T +L
Sbjct: 1007 GVIYRVNDYAYVAPASEETVSQRHIMRIERLYRDSDGQTFARGTWCYRPEETF-----HL 1061
Query: 189 VDRK----RVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
RK VFL+ D ++ ++ K + V M K K D+Y
Sbjct: 1062 ATRKFCENEVFLTSYYDTVTVDRLIGKCHVMPVRQFM--RQKPKGFDDSDIY 1111
>gi|410951357|ref|XP_003982364.1| PREDICTED: protein polybromo-1 isoform 7 [Felis catus]
Length = 1651
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 948 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 999
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1000 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1054
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1159 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1217
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1218 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1249
>gi|196048067|ref|ZP_03115245.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108]
gi|196021323|gb|EDX60052.1| DNA-cytosine methyltransferase [Bacillus cereus 03BB108]
Length = 427
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 300 GASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE-----AADDFLSLLKEWAKL--- 351
G SL G L + AI+IN ACK+ K NHP+T V N D+ LS+ K +
Sbjct: 21 GFSLQGFNL--KLAIEINSDACKTYKVNHPDTIVWNRDIKTVTGDEILSITKNNPIILLG 78
Query: 352 ---CQYFSIY 358
CQ FSI+
Sbjct: 79 GSPCQSFSIF 88
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 105/292 (35%), Gaps = 65/292 (22%)
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV----------------------- 150
E+ + L +R Y+ A+ +G LY +GD Y+ E A
Sbjct: 721 EQLDDLDSRVLYSSATKNGTLYRVGDGVYLPPEAFAFNIKLSSPVKRPRKEPVDEELYPE 780
Query: 151 ------DYI-------------ARIVELF--ESVDGEP-----YFKARWFYRAEDTVIKD 184
DYI RI E+F + +G P + FYR E+T
Sbjct: 781 HYRKYSDYIKGSNLDAPEPYRIGRIKEIFCTKKSNGRPNETDIKIRLNKFYRPENTHKST 840
Query: 185 LA-YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTL 243
A Y D ++ SD E + + + + + P Y+ Y
Sbjct: 841 PASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQDYSDGGPDRFYFLEAYNA 900
Query: 244 PHLTFSNINNESN----------RRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGAM 293
+F + N + + A S + + I P++ LD++SGCG +
Sbjct: 901 KTKSFEDPPNHARSPGNKGKGKGKGKGKAKSQTCEPSEREAEIKLPKLRTLDVFSGCGGL 960
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
S G +G+ T WAI++ A ++ + N+P T V E + L L+
Sbjct: 961 SEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTAVFTEDCNVLLKLV 1007
>gi|410951355|ref|XP_003982363.1| PREDICTED: protein polybromo-1 isoform 6 [Felis catus]
Length = 1703
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 948 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 999
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1000 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1054
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1159 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1217
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1218 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1249
>gi|324499900|gb|ADY39969.1| Protein polybromo-1 [Ascaris suum]
Length = 1930
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 132 GCLYNLGDDAYVKA---EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYL 188
GC+Y + D AY+ A E +I RI L++ DG + + W YR E+T +L
Sbjct: 1022 GCVYRVRDYAYIAAASDEAATRRHIMRIERLYKDCDGHMFARGIWCYRPEETF-----HL 1076
Query: 189 VDRK----RVFLSDVEDDNPLNCIVSKAKI 214
RK VFL+ D ++ ++ K +
Sbjct: 1077 ATRKFIENEVFLTPYFDTVTVDRLIGKCHV 1106
>gi|410951349|ref|XP_003982360.1| PREDICTED: protein polybromo-1 isoform 3 [Felis catus]
Length = 1688
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 933 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
>gi|410951345|ref|XP_003982358.1| PREDICTED: protein polybromo-1 isoform 1 [Felis catus]
Length = 1633
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 933 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
>gi|410951351|ref|XP_003982361.1| PREDICTED: protein polybromo-1 isoform 4 [Felis catus]
Length = 1581
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 933 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
>gi|355709413|gb|AES03583.1| polybromo 1 [Mustela putorius furo]
Length = 677
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 182 SSGAAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 233
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 234 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 288
Query: 218 AANMDL 223
L
Sbjct: 289 KEYFKL 294
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 393 CHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 451
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 452 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 483
>gi|170284709|gb|AAI61362.1| Unknown (protein for IMAGE:5307614) [Xenopus (Silurana) tropicalis]
gi|170285041|gb|AAI61352.1| LOC100145600 protein [Xenopus (Silurana) tropicalis]
Length = 836
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE + +I I L+E GE + WFYR +T
Sbjct: 420 RTYSQDCSFKNSMYHVGDYVYVEPAEANLLPHIVCIERLWEDSAGEKWLYGCWFYRPNET 479
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 480 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 515
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHYT-QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
C+Y Q + +GD Y+K+ + RI +++ DG YF F E+T
Sbjct: 621 CYYFDQLRYNELWLKVGDCVYIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEET- 678
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
I + + +K +FLS++E+ P+ CI+ K +
Sbjct: 679 IHEPTKMFYKKEMFLSNLEESCPMTCILGKCGV 711
>gi|414883788|tpg|DAA59802.1| TPA: hypothetical protein ZEAMMB73_755353 [Zea mays]
Length = 1115
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 971 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1029
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTIS--SETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 1030 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1089
Query: 281 --MSLLDLYSGCGAMSTGL 297
++ LD+++GCG +S GL
Sbjct: 1090 NRLATLDIFAGCGGLSEGL 1108
>gi|410951359|ref|XP_003982365.1| PREDICTED: protein polybromo-1 isoform 8 [Felis catus]
Length = 1596
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 948 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 999
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1000 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1054
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1159 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1217
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1218 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1249
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 110/293 (37%), Gaps = 67/293 (22%)
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV----------------------- 150
E+ E L +R Y A+ +G LY +GD Y+ E
Sbjct: 980 EQLEDLDSRVLYFSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPE 1039
Query: 151 ------DYI-------------ARIVELF--ESVDGEP-----YFKARWFYRAEDTVIKD 184
DYI RI E+F + +G P + FYR E+T
Sbjct: 1040 HYRKYSDYIKGSNLDAPEPYRIGRIKEIFCLKKSNGRPNETDIKIRLNKFYRPENTHKST 1099
Query: 185 LA-YLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMK-YT 242
LA Y D ++ SD E + + + E ++ ++ ++ D +Y ++ Y
Sbjct: 1100 LASYHADINLLYWSDEEAVVDFKAVQGRCTV-EYGEDLPECVQEYSMGGPDRFYFLEAYN 1158
Query: 243 LPHLTFSNINNESN----------RRDSDASSTISSETGSNSPIGEPEMSLLDLYSGCGA 292
+F + N + + S + + I P++ LD++SGCG
Sbjct: 1159 ARSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPETEIKLPKLRTLDVFSGCGG 1218
Query: 293 MSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 345
+S G +G+ T WAI++ A ++ + N+P + V E + L L+
Sbjct: 1219 LSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1266
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora
B]
Length = 1248
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
M LDL++G GA GL + A+ G +T AI+I+P A ++LK N P+T V N+ A+
Sbjct: 755 MKGLDLFAGAGAF--GLAMEAT--GCIKITH-AIEISPSAARTLKINSPDTIVYNQCANV 809
Query: 341 FL 342
L
Sbjct: 810 VL 811
>gi|448336037|ref|ZP_21525152.1| DNA-cytosine methyltransferase [Natrinema pallidum DSM 3751]
gi|445630929|gb|ELY84188.1| DNA-cytosine methyltransferase [Natrinema pallidum DSM 3751]
Length = 735
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340
+ +DL++G G +S GL RWAIDI+ A + + NHPE RN D
Sbjct: 306 TAVDLFAGAGGLSCGL------RQADYDIRWAIDIDTDAVATYRLNHPEIPHRNVVCGD 358
>gi|414883784|tpg|DAA59798.1| TPA: hypothetical protein ZEAMMB73_504910 [Zea mays]
Length = 1115
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 171 ARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--AANMDLEAKQK 228
AR FYR +D + AY D + V+ S+ D P++ I K ++ + A+ DL +
Sbjct: 971 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1029
Query: 229 NIPPCDLYYD-----MKYTLPHLTFSNINNESNRRDSDASSTIS--SETGSNSPIGEPE- 280
++ C+L YD +K P++ F ++ ++ + I + S + P+
Sbjct: 1030 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1089
Query: 281 --MSLLDLYSGCGAMSTGL 297
++ LD+++GCG +S GL
Sbjct: 1090 NRLATLDIFAGCGGLSEGL 1108
>gi|423645609|ref|ZP_17621204.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD166]
gi|401266686|gb|EJR72756.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD166]
Length = 438
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE----- 336
++ +++GCG + +G S + AI+++P AC + K NHPET+V N+
Sbjct: 7 GVIGIFAGCGGLDSGF------SKSDFNVQLAIELDPDACDTYKKNHPETEVWNQDIKTV 60
Query: 337 AADDFLSLLKEWAKL------CQYFSIY 358
D+ L+ + CQ FSI+
Sbjct: 61 KGDEIRKLVGNKPLILLGGSPCQSFSIF 88
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1139 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1193
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1194 EDCNVLLKLV 1203
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L E ++ + R +Y + S+D +GD V ++ + Y+AR+ L+E +G+
Sbjct: 735 ISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ- 793
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 794 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
>gi|301767182|ref|XP_002919041.1| PREDICTED: protein polybromo-1-like [Ailuropoda melanoleuca]
Length = 1620
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 923 AAGLSGL-----------QRTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 971
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 972 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1026
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1131 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1189
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1190 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1221
>gi|410951347|ref|XP_003982359.1| PREDICTED: protein polybromo-1 isoform 2 [Felis catus]
Length = 1601
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ E ++ +I I L+E
Sbjct: 901 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE 952
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 953 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1007
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1112 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1170
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1171 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1202
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 137 LGDDAYVKAEE---GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKR 193
+G + YV E ++A+++ ++E+ +G F A W +R DT++ + + D
Sbjct: 502 IGINDYVLVEPRNPAIPSHVAKVIYMWENKNGIKQFHANWLHRGNDTILGETS---DPIE 558
Query: 194 VFLSDVEDDNPLNCIVSKAKI 214
+FLSD DD P + SK +
Sbjct: 559 LFLSDDCDDIPFKSVRSKCTV 579
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1020 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1074
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1075 EDCNVLLKLV 1084
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L E ++ + R +Y + S+D +GD V ++ + Y+AR+ L+E +G+
Sbjct: 617 ISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ- 675
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 676 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 719
>gi|224543136|ref|ZP_03683675.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM
15897]
gi|224523923|gb|EEF93028.1| modification methylase BanI [Catenibacterium mitsuokai DSM 15897]
Length = 430
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE-------TKV 333
+ +DL++G G + G + S GVK + +I P+A K LK NHP T+V
Sbjct: 5 IKFVDLFAGIGGIRKGFELACSDRGVKTECVFTSEIKPYAIKVLKQNHPNETITGDITQV 64
Query: 334 RNEAADDFLSLLKEWAKLCQYFS 356
DF LL + CQ FS
Sbjct: 65 DATKIPDFDFLLGGFP--CQAFS 85
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1139 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1193
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1194 EDCNVLLKLV 1203
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L E ++ + R +Y + S+D +GD V ++ + Y+AR+ L+E +G+
Sbjct: 735 ISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ- 793
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 794 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1151 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1205
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1206 EDCNVLLKLV 1215
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L E ++ + R +Y + S+D +GD V ++ + Y+AR+ L+E +G+
Sbjct: 748 ISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ- 806
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 807 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 850
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1138 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1192
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1193 EDCNVLLKLV 1202
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I L E ++ + R +Y + S+D +GD V ++ + Y+AR+ L+E +G+
Sbjct: 735 ISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ- 793
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 794 MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
>gi|395516887|ref|XP_003762615.1| PREDICTED: protein polybromo-1 isoform 3 [Sarcophilus harrisii]
Length = 1690
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1146 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1204
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1205 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1236
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 945 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1004
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1005 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
>gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
Length = 361
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 12/68 (17%)
Query: 303 LSGVKLVTRWAIDINPHACKSLKFNHPETKV-----RNEAADDFLS-----LLKEWAKLC 352
++G+K+ R+AI++NPHA KS + NH KV R+ A DFL+ + C
Sbjct: 21 MAGIKV--RYAIEVNPHAAKSFELNHKGAKVICGDIRDVKATDFLNKDEEVFIIMGGPPC 78
Query: 353 QYFSIYDT 360
Q FS+ +T
Sbjct: 79 QGFSMSNT 86
>gi|334342446|ref|XP_003341816.1| PREDICTED: protein polybromo-1 [Monodelphis domestica]
Length = 1705
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1161 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1219
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1220 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1251
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 960 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1019
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1020 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
>gi|302757675|ref|XP_002962261.1| hypothetical protein SELMODRAFT_438037 [Selaginella moellendorffii]
gi|300170920|gb|EFJ37521.1| hypothetical protein SELMODRAFT_438037 [Selaginella moellendorffii]
Length = 725
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R Y + +DG Y L D V EE + Y+A I E+ E DG +WFYR E+
Sbjct: 45 RKFYKEFELDGARYCLEDSVLVTPEEKSQKPYVAIIKEIKEYKDGSIAVTGQWFYRPEEA 104
Query: 181 VIKDLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
K V D + +F S D+ P ++ K + + ++ K PP L+
Sbjct: 105 ERKGGGSWVADDTRELFYSFHRDEVPAESVMHKCVVHFIPSH-------KKSPPRSLH 155
>gi|395516885|ref|XP_003762614.1| PREDICTED: protein polybromo-1 isoform 2 [Sarcophilus harrisii]
Length = 1705
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1161 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1219
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1220 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1251
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 960 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1019
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1020 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+++ LD+++GCG +S GL SGV T+WAI+ A ++ NHPE +
Sbjct: 25 QLATLDIFAGCGGLSEGL----ERSGVS-QTKWAIEYEEPAGEAFNLNHPEASL 73
>gi|88758672|gb|AAI13296.1| PB1 protein [Bos taurus]
Length = 462
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 25 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 83
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 84 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 115
>gi|419139608|ref|ZP_13684392.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC5E]
gi|419387617|ref|ZP_13928489.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14D]
gi|419924044|ref|ZP_14441942.1| DNA-cytosine methyltransferase [Escherichia coli 541-15]
gi|377978406|gb|EHV41685.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC5E]
gi|378230002|gb|EHX90133.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC14D]
gi|388391048|gb|EIL52522.1| DNA-cytosine methyltransferase [Escherichia coli 541-15]
Length = 366
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 266 ISSETGSNSPIGEPE-MSLLDLYSGCGAMSTGLCIGASL-----SGVKLVTRWAIDINPH 319
IS SN+ + E L+ L+SGCG M G C G S+ K WA + NP+
Sbjct: 45 ISIALASNNDTFQKEKYKLISLFSGCGGMDLGFCGGFSVLNKQYKKTKFEITWANEFNPN 104
Query: 320 ACKSLK--FNH 328
A K+ K F+H
Sbjct: 105 AVKTYKKNFSH 115
>gi|54648598|gb|AAH84946.1| LOC495429 protein, partial [Xenopus laevis]
Length = 1378
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR ++T
Sbjct: 968 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPKET 1027
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K+ + V
Sbjct: 1028 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKSVVMFV 1063
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
C+Y Q + +GD Y+K+ + RI +++ DG YF F E+T
Sbjct: 1169 CYYFDQLRYNDLWLKVGDCVYIKSHGLVPPRVGRIEKMWLR-DGAAYFFGPIFIHPEET- 1226
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
I + + +K +FLS++E+ P+ CI+ K +
Sbjct: 1227 IHEPTKMFYKKEMFLSNLEESCPMTCILGKCGV 1259
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 98 KKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARI 156
+KK+ ++ IG E Q +Y + S++ L +GD V +E+ ++ Y+ARI
Sbjct: 25 RKKQTQCKLTWIGESIHTEGKKQ---YYRKVSLNDELLEVGDCVSVSSEDPSIPLYLARI 81
Query: 157 VELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
++E +G+ F A WF R DTV+ + + D + + D +D LN + K +
Sbjct: 82 TSMWEDNNGK-MFHAHWFLRGIDTVLGETS---DPLELVIVDECEDMLLNYVQGKVNV 135
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P+ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 446 PKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 500
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 501 NVLLKLV 507
>gi|290981126|ref|XP_002673282.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
gi|284086864|gb|EFC40538.1| ATREV3; DNA binding protein-like protein [Naegleria gruberi]
Length = 1980
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 136 NLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVF 195
N+GD Y++A + + YIA I+ + + + + RWFYR E+T + +F
Sbjct: 546 NIGDFVYMRAPKNSKPYIACIL---DKNNEKKTIQVRWFYRPEETKTGARDW-TGVSEIF 601
Query: 196 LSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPP 232
L D NP +V K K+ V +N+PP
Sbjct: 602 LISQSDTNPFETVVGKCKVLVVDDYF------RNMPP 632
>gi|126336313|ref|XP_001367622.1| PREDICTED: protein polybromo-1 isoform 1 [Monodelphis domestica]
Length = 1603
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1114 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1172
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1173 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1204
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 913 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 972
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 973 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1008
>gi|326431274|gb|EGD76844.1| hypothetical protein PTSG_08191 [Salpingoeca sp. ATCC 50818]
Length = 262
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 179
Y+ ++ +N GD VK +++Y+A IV +F + D + Y + +WFYR ED
Sbjct: 11 YSSFNLGNVTFNCGDTILVKGA-SSMEYVADIVRVFTNNDRDVYVELKWFYRPED 64
>gi|395516883|ref|XP_003762613.1| PREDICTED: protein polybromo-1 isoform 1 [Sarcophilus harrisii]
Length = 1635
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1146 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1204
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1205 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1236
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 945 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1004
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1005 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
>gi|348521878|ref|XP_003448453.1| PREDICTED: protein polybromo-1 [Oreochromis niloticus]
Length = 1588
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q Y +GD Y+++ + +ARI +L++ +G +F F E+T +
Sbjct: 1107 YYEQLCYKNMWYKVGDCVYIQSHGLSKPRVARIEKLWQQ-NGTTFFFGPIFIHPEETEHE 1165
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
R+ VFLS +E+ P+ C++ K ++
Sbjct: 1166 PTKMFYKRE-VFLSHLEETLPMTCVIGKCVVS 1196
>gi|395516891|ref|XP_003762617.1| PREDICTED: protein polybromo-1 isoform 5 [Sarcophilus harrisii]
Length = 1653
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1161 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1219
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1220 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1251
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 960 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1019
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1020 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
>gi|302763509|ref|XP_002965176.1| hypothetical protein SELMODRAFT_167230 [Selaginella moellendorffii]
gi|300167409|gb|EFJ34014.1| hypothetical protein SELMODRAFT_167230 [Selaginella moellendorffii]
Length = 360
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R Y + +DG Y L D V EE + Y+A I E+ E DG +WFYR E+
Sbjct: 20 RKFYKEFELDGARYCLEDSVLVTPEEKSQKPYVAIIKEIKEYKDGSIAVTGQWFYRPEEA 79
Query: 181 VIKDLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLY 236
K V D + +F S D+ P ++ K + + ++ K PP L+
Sbjct: 80 ERKGGGSWVADDTRELFYSFHRDEVPAESVMHKCVVHFIPSH-------KKSPPRSLH 130
>gi|383852643|ref|XP_003701836.1| PREDICTED: protein polybromo-1-like [Megachile rotundata]
Length = 1651
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA+I ++ + DG+ YFK W + V
Sbjct: 1112 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPAE-VPH 1169
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 216
L ++ +FLS V+ +P+ IV K + E
Sbjct: 1170 TPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLE 1202
>gi|395516889|ref|XP_003762616.1| PREDICTED: protein polybromo-1 isoform 4 [Sarcophilus harrisii]
Length = 1583
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1146 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1204
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1205 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1236
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 945 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1004
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1005 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
>gi|126336315|ref|XP_001367663.1| PREDICTED: protein polybromo-1 isoform 2 [Monodelphis domestica]
Length = 1583
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1146 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1204
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1205 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1236
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 945 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1004
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1005 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
>gi|395516895|ref|XP_003762619.1| PREDICTED: protein polybromo-1 isoform 7 [Sarcophilus harrisii]
Length = 1583
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1121 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1179
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1180 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1211
>gi|16551971|dbj|BAB71210.1| unnamed protein product [Homo sapiens]
Length = 1047
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 857 AAGLSGLH-----------RTYSQDCSFKNSMYHVGDHVYVEPAEANLQPHIVCIERLWE 905
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 906 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 960
>gi|126336317|ref|XP_001367708.1| PREDICTED: protein polybromo-1 isoform 3 [Monodelphis domestica]
Length = 1583
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1121 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1179
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1180 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1211
>gi|395516893|ref|XP_003762618.1| PREDICTED: protein polybromo-1 isoform 6 [Sarcophilus harrisii]
Length = 1598
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +L+ DG YF F E+T
Sbjct: 1161 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKLWVR-DGAAYFFGPIFIHPEETE 1219
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1220 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1251
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 960 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLCGCWFYRPNET 1019
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1020 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
>gi|332162719|ref|YP_004299296.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666949|gb|ADZ43593.1| Cytosine-specific methyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859459|emb|CBX69803.1| hypothetical protein YEW_FM23370 [Yersinia enterocolitica W22703]
Length = 365
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 266 ISSETGSNSPIGEPE-MSLLDLYSGCGAMSTGLC-----IGASLSGVKLVTRWAIDINPH 319
IS SNS + + E L+ L+SGCG M G C + K WA + NP+
Sbjct: 44 ISMALASNSDVFQKEKYKLISLFSGCGGMDLGFCGDFSVLNKKYKKTKFEIIWANEFNPN 103
Query: 320 ACKSLK--FNH 328
A K+ K F+H
Sbjct: 104 AVKTYKKNFSH 114
>gi|238486542|ref|XP_002374509.1| PHD finger and BAH domain protein (Snt2), putative [Aspergillus
flavus NRRL3357]
gi|220699388|gb|EED55727.1| PHD finger and BAH domain protein (Snt2), putative [Aspergillus
flavus NRRL3357]
Length = 1713
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 131 DGCLYNLGDDAYVKAEE-GAVDYIARIVELFES--VDGEPYFKAR--WFYRAEDTVIKDL 185
DG +++ D Y+ E G Y+ARI+E + V P R W+YR D K
Sbjct: 250 DGTTFSINDHVYLICEPPGEPYYLARIMEFIPNKDVPSGPIEAVRVNWYYRPRDIQRK-- 307
Query: 186 AYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK 228
+ D + VF S D PL + K +I ++ DLE +K
Sbjct: 308 --VADTRLVFASMHSDTCPLTSLRGKCQIKHLSEIDDLEEYRK 348
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P+ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1023 PKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1077
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1078 NVLLKLV 1084
>gi|348588801|ref|XP_003480153.1| PREDICTED: protein polybromo-1-like isoform 3 [Cavia porcellus]
Length = 1582
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G +++ L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 934 SSGAATLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 153 IARIVELF---ESVDGEPYFKARWFYRAEDT-------VIKDLAYLVDRKRVFLSDVEDD 202
I +I E+F ES + FYR E+T I+D+ L + D ED
Sbjct: 213 IGQIKEIFCEKESNGAVIKLRINKFYRPENTHKSSTKKYIEDINLLYWSYEEAVVDFEDV 272
Query: 203 NPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDA 262
C+V + + +L K+ Y+ Y +F + + ++
Sbjct: 273 QG-RCVVKYCEATDTPEKYNLGDKE------HFYFQEAYNAKKKSFEEVPKYARGKEKRK 325
Query: 263 SSTISSE-TGSNSPIGE------PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAID 315
SE + PI E P++ LD++SGCG +S G +G+ T WAI+
Sbjct: 326 EKGRGSEKLITLEPIQEMKEVNVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETMWAIE 380
Query: 316 INPHACKSLKFNHPETKVRNEAADDFLSLL 345
+ A ++ N+P+T V +E + L ++
Sbjct: 381 MWKPAGQAFLLNYPKTIVLSEDCNILLKMV 410
>gi|115388477|ref|XP_001211744.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195828|gb|EAU37528.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1701
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 131 DGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDGEP----YFKARWFYRAEDTVIKDL 185
DG + + D Y+ E G Y+ARI+E S D + W+YR D K
Sbjct: 248 DGSTFAVNDHVYLICEPPGEPYYLARIMEFLPSKDNPSGPIEALRVNWYYRPRDIQRK-- 305
Query: 186 AYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
+ D + VF S D PL + K +I ++ DL+ +K
Sbjct: 306 --VADSRLVFASMHSDTCPLGSLRGKCQIKHLSEIDDLDEYRKT 347
>gi|380800167|gb|AFE71959.1| protein polybromo-1 isoform 1, partial [Macaca mulatta]
Length = 721
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 32 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 91
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 92 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 127
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 232 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 290
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 291 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 322
>gi|348588797|ref|XP_003480151.1| PREDICTED: protein polybromo-1-like isoform 1 [Cavia porcellus]
Length = 1704
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G +++ L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 949 SSGAATLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1055
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|419280975|ref|ZP_13823208.1| modification methylase HaeIII [Escherichia coli DEC10E]
gi|378122507|gb|EHW83935.1| modification methylase HaeIII [Escherichia coli DEC10E]
Length = 287
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 266 ISSETGSNSPIGEPE-MSLLDLYSGCGAMSTGLCIGASL-----SGVKLVTRWAIDINPH 319
IS SN+ + E L+ L+SGCG M G C G S+ K WA + NP+
Sbjct: 45 ISIALASNNDTFQKEKYKLISLFSGCGGMDLGFCGGFSVLNKQYKKTKFEITWANEFNPN 104
Query: 320 ACKSLK--FNH 328
A K+ K F+H
Sbjct: 105 AVKTYKKNFSH 115
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 12/65 (18%)
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
++G S IG +D++SG G GL +GA +G+ + R+AI+I+ ++ K+ NH
Sbjct: 2 KSGRTSKIG------IDIFSGAG----GLSLGAEWAGITV--RYAIEIDENSAKTYSKNH 49
Query: 329 PETKV 333
P T++
Sbjct: 50 PNTQI 54
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 269 ETGSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E G P P +L L+SGCG G C G SG ++ R A++++ +AC++ + N
Sbjct: 11 EPGKTVPRESPPTAL-SLFSGCG----GFCEGIESSGFEV--RAAVELDKYACETYRHNF 63
Query: 329 PETKVRNEAADDFLS 343
P TK+ FL+
Sbjct: 64 PRTKLFEGDVQSFLT 78
>gi|351710069|gb|EHB12988.1| Protein polybromo-1 [Heterocephalus glaber]
Length = 1691
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G +++ L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 936 SSGAATLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 987
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 988 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1042
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1147 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1205
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1206 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1237
>gi|392333516|ref|XP_001059164.2| PREDICTED: protein polybromo-1-like isoform 2 [Rattus norvegicus]
gi|392353774|ref|XP_240329.6| PREDICTED: protein polybromo-1-like isoform 4 [Rattus norvegicus]
Length = 1652
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 949 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1250
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 274 SPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
+ I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 29 AAIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTV 83
Query: 334 RNEAADDFLSLL 345
E + L L+
Sbjct: 84 FTEDCNVLLKLV 95
>gi|348588805|ref|XP_003480155.1| PREDICTED: protein polybromo-1-like isoform 5 [Cavia porcellus]
Length = 1689
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G +++ L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 934 SSGAATLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|348588799|ref|XP_003480152.1| PREDICTED: protein polybromo-1-like isoform 2 [Cavia porcellus]
Length = 1602
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G +++ L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 902 SSGAATLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 953
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 954 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1008
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1113 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1171
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1172 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1203
>gi|328948822|ref|YP_004366159.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328449146|gb|AEB14862.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 437
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD- 339
+ +DL++G G + G + G+K + +I PHA + LK NHP VR +
Sbjct: 7 IKFIDLFAGIGGIRKGFESACADLGIKTECVFTSEIKPHAVEVLKQNHPNETVRGDITKI 66
Query: 340 ------DFLSLLKEWAKLCQYFS 356
DF LL + CQ FS
Sbjct: 67 ETAEIPDFDFLLGGFP--CQAFS 87
>gi|45384026|ref|NP_990496.1| protein polybromo-1 [Gallus gallus]
gi|82107536|sp|Q90941.1|PB1_CHICK RecName: Full=Protein polybromo-1
gi|951231|emb|CAA62353.1| polybromo 1 protein [Gallus gallus]
Length = 1633
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 943 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 1002
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1003 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1038
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1234
>gi|344276621|ref|XP_003410106.1| PREDICTED: protein polybromo-1 isoform 2 [Loxodonta africana]
Length = 1582
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSTGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|392333512|ref|XP_003752914.1| PREDICTED: protein polybromo-1-like [Rattus norvegicus]
gi|392353770|ref|XP_003751595.1| PREDICTED: protein polybromo-1-like isoform 2 [Rattus norvegicus]
Length = 1597
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 949 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1250
>gi|344276625|ref|XP_003410108.1| PREDICTED: protein polybromo-1 isoform 4 [Loxodonta africana]
Length = 1689
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 945 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSTGEKWLYGCWFYRPNET 1004
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1005 F-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|431899880|gb|ELK07827.1| Protein polybromo-1 [Pteropus alecto]
Length = 1587
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 843 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 902
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 903 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 938
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1043 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1101
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1102 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCSV 1133
>gi|426340905|ref|XP_004034364.1| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1 [Gorilla gorilla
gorilla]
Length = 1678
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E + +I I L+E
Sbjct: 926 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 974
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 975 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1029
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1134 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1192
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1193 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1224
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 98 KKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARI 156
K K + AG + + E + +Y V G + G+ VK +EG + YI R+
Sbjct: 427 KMKVIKAGKVTTSWVGEALYEEGGKVYYPGVRVGGDVIEGGECVSVKNKDEGGLPYIGRV 486
Query: 157 VELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 216
V ++ G+ WF RA DT++++ + + + D DD + CI K ++
Sbjct: 487 VYMWGESGGK-MVHVDWFMRAADTILQETS---QPDELLIIDECDDLSVECIAGKVDVSH 542
>gi|344276619|ref|XP_003410105.1| PREDICTED: protein polybromo-1 isoform 1 [Loxodonta africana]
Length = 1602
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 905 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 953
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 954 DSTGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFV 1008
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1113 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1171
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1172 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1203
>gi|326927632|ref|XP_003209995.1| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1-like [Meleagris
gallopavo]
Length = 1600
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 910 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 969
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 970 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1005
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1111 CHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1169
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1170 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1201
>gi|124486951|ref|NP_001074720.1| protein polybromo-1 [Mus musculus]
gi|225000328|gb|AAI72609.1| Polybromo 1 [synthetic construct]
gi|225000430|gb|AAI72736.1| Polybromo 1 [synthetic construct]
Length = 1704
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 949 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1250
>gi|291393823|ref|XP_002713288.1| PREDICTED: polybromo 1 isoform 2 [Oryctolagus cuniculus]
Length = 1689
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAETNLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|392333510|ref|XP_003752913.1| PREDICTED: protein polybromo-1-like [Rattus norvegicus]
gi|392353768|ref|XP_003751594.1| PREDICTED: protein polybromo-1-like isoform 1 [Rattus norvegicus]
Length = 1689
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 934 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1235
>gi|92098061|gb|AAI15012.1| PB1 protein [Homo sapiens]
Length = 1540
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 843 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 891
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 892 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 946
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1051 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1109
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1110 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1141
>gi|395833004|ref|XP_003789537.1| PREDICTED: protein polybromo-1 [Otolemur garnettii]
Length = 1664
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 949 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 1008
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1009 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1044
>gi|410216156|gb|JAA05297.1| polybromo 1 [Pan troglodytes]
gi|410299184|gb|JAA28192.1| polybromo 1 [Pan troglodytes]
gi|410342825|gb|JAA40359.1| polybromo 1 [Pan troglodytes]
gi|410342827|gb|JAA40360.1| polybromo 1 [Pan troglodytes]
Length = 1582
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|328793686|ref|XP_625055.3| PREDICTED: protein polybromo-1 [Apis mellifera]
Length = 1651
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA+I ++ + DG+ YFK W + V
Sbjct: 1112 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPAE-VPH 1169
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1170 TPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYICSRPTEIPEDDVYICESLYD 1227
>gi|119585645|gb|EAW65241.1| polybromo 1, isoform CRA_c [Homo sapiens]
Length = 1703
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 951 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 999
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1000 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1054
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1159 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1217
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1218 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1249
>gi|73921624|sp|Q86U86.1|PB1_HUMAN RecName: Full=Protein polybromo-1; Short=hPB1; AltName:
Full=BRG1-associated factor 180; Short=BAF180; AltName:
Full=Polybromo-1D
gi|30721853|gb|AAP34197.1| polybromo-1D [Homo sapiens]
gi|119585649|gb|EAW65245.1| polybromo 1, isoform CRA_g [Homo sapiens]
Length = 1689
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|410259776|gb|JAA17854.1| polybromo 1 [Pan troglodytes]
Length = 1582
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|291393821|ref|XP_002713287.1| PREDICTED: polybromo 1 isoform 1 [Oryctolagus cuniculus]
Length = 1704
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAETNLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|341942250|sp|Q8BSQ9.4|PB1_MOUSE RecName: Full=Protein polybromo-1; AltName: Full=BRG1-associated
factor 180; Short=BAF180
Length = 1634
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 934 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1235
>gi|12083875|gb|AAG48933.1|AF177387_1 polybromo-1 [Homo sapiens]
gi|119585646|gb|EAW65242.1| polybromo 1, isoform CRA_d [Homo sapiens]
Length = 1634
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|12083896|gb|AAG48941.1|AF225872_1 polybromo-1 [Homo sapiens]
gi|119585651|gb|EAW65247.1| polybromo 1, isoform CRA_i [Homo sapiens]
Length = 1582
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|417406643|gb|JAA49971.1| Putative chromatin remodeling complex rsc subunit rsc1/polybromo
[Desmodus rotundus]
Length = 1634
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|402859865|ref|XP_003894357.1| PREDICTED: protein polybromo-1 isoform 1 [Papio anubis]
Length = 1652
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|397495927|ref|XP_003818795.1| PREDICTED: protein polybromo-1 isoform 1 [Pan paniscus]
Length = 1634
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|291393827|ref|XP_002713290.1| PREDICTED: polybromo 1 isoform 4 [Oryctolagus cuniculus]
Length = 1620
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 923 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAETNLQPHIVCIERLWE 971
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 972 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1026
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1131 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1189
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1190 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1221
>gi|291393825|ref|XP_002713289.1| PREDICTED: polybromo 1 isoform 3 [Oryctolagus cuniculus]
Length = 1582
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAETNLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|390475087|ref|XP_002807635.2| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1 [Callithrix
jacchus]
Length = 1704
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|297671121|ref|XP_002813688.1| PREDICTED: protein polybromo-1 isoform 1 [Pongo abelii]
Length = 1689
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|119585648|gb|EAW65244.1| polybromo 1, isoform CRA_f [Homo sapiens]
Length = 1698
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 946 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 994
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 995 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1049
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1154 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1212
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1213 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1244
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I + E + + +Y + +D +GD V ++ + Y+AR+ L+E P
Sbjct: 732 ISWIGEAVKTDGKKTYYKKVCIDSETLKVGDCVSVIPDDSSKPLYLARVTALWEDSSQGP 791
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
F A WF DTV L D +FL D +D L+ I SK +
Sbjct: 792 MFHAHWFCAGTDTV---LGATSDPLELFLVDECEDMQLSYIHSKVTVV 836
>gi|355691467|gb|EHH26652.1| hypothetical protein EGK_16676 [Macaca mulatta]
gi|355746645|gb|EHH51259.1| hypothetical protein EGM_10600 [Macaca fascicularis]
Length = 1689
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|403291077|ref|XP_003936626.1| PREDICTED: protein polybromo-1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1634
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 937 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 985
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 986 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1235
>gi|380016641|ref|XP_003692286.1| PREDICTED: protein polybromo-1-like [Apis florea]
Length = 1651
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA+I ++ + DG+ YFK W + V
Sbjct: 1112 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPAE-VPH 1169
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1170 TPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYICSRPTEIPEDDVYICESLYD 1227
>gi|350591250|ref|XP_003132305.3| PREDICTED: protein polybromo-1 [Sus scrofa]
Length = 1542
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 845 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 893
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 894 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 948
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1053 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFFGPIFIHPEETE 1111
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1112 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1143
>gi|120538343|gb|AAI29936.1| PB1 protein [Homo sapiens]
Length = 1597
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|12083892|gb|AAG48939.1|AF225870_1 polybromo-1 [Homo sapiens]
Length = 1602
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 905 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 953
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 954 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1008
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1113 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1171
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1172 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1203
>gi|417406663|gb|JAA49978.1| Putative chromatin remodeling complex rsc subunit rsc1/polybromo
[Desmodus rotundus]
Length = 1649
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|119585643|gb|EAW65239.1| polybromo 1, isoform CRA_a [Homo sapiens]
Length = 1601
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 904 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 952
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 953 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1007
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1112 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1170
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1171 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1202
>gi|338714649|ref|XP_001492813.3| PREDICTED: protein polybromo-1 isoform 1 [Equus caballus]
Length = 1582
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 945 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 1004
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 1005 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1040
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1145 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1203
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1204 -HEPTKMFYKKEVFLSNLEESCPMTCILGKCAV 1235
>gi|92096004|gb|AAI15010.1| PB1 protein [Homo sapiens]
Length = 1454
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 936 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
>gi|120537398|gb|AAI29935.1| PB1 protein [Homo sapiens]
Length = 1652
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|119585644|gb|EAW65240.1| polybromo 1, isoform CRA_b [Homo sapiens]
Length = 1620
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 923 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 971
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 972 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1026
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1131 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1189
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1190 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1221
>gi|168053895|ref|XP_001779369.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669167|gb|EDQ55759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 937
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAE 178
+ R Y VDG Y + D V E + Y+A I ++ ++ DG + +WFYR E
Sbjct: 319 KGRKTYQAFEVDGNRYEVDDPVLVTPERPSQKPYVAIIKKIMQAKDGTVQVEGQWFYRPE 378
Query: 179 DTVIKDLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
+ K D + +F S D+ P ++ K ++ + N L + K+
Sbjct: 379 EAEKKGGGTWASSDSRELFYSFHIDEVPAESVMHKCQVHFIPPNKQLPQRHKH 431
>gi|425773859|gb|EKV12184.1| C-5 cytosine methyltransferase DmtA [Penicillium digitatum PHI26]
Length = 627
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 285 DLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL 344
D Y G G G+ GA +GVKL +WA+DI+ HA ++ + N E +V + DF S
Sbjct: 325 DAYCGAG----GVSCGAKQAGVKL--QWAVDIDKHALETYQLNFHEVEVEHS---DFFSF 375
Query: 345 LKEWAKL-----------CQYFSIYDTDKVPEQSLN 369
L +K CQ +S T P N
Sbjct: 376 LTNDSKFLRVDIAHCSPPCQTWSPAHTVPCPRDDAN 411
>gi|397495929|ref|XP_003818796.1| PREDICTED: protein polybromo-1 isoform 2 [Pan paniscus]
Length = 1652
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 952 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 1000
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 1001 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1055
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1160 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1218
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1219 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1250
>gi|432950689|ref|XP_004084564.1| PREDICTED: protein polybromo-1-like [Oryzias latipes]
Length = 768
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 127 QASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTV-IKD 184
+ S D YN+G+ YV+ E + +I I L+E G + WFYR +T +
Sbjct: 97 ECSFDNITYNVGEFVYVEPSEANLQPHIVCIERLWEDSAGVMWLYGCWFYRPSETFHVAT 156
Query: 185 LAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L K VF SD + PL+ ++ K + V
Sbjct: 157 RKFL--EKEVFKSDYYNRVPLSKVLGKCVVVFV 187
>gi|425782435|gb|EKV20344.1| C-5 cytosine methyltransferase DmtA [Penicillium digitatum Pd1]
Length = 627
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 285 DLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL 344
D Y G G G+ GA +GVKL +WA+DI+ HA ++ + N E +V + DF S
Sbjct: 325 DAYCGAG----GVSCGAKQAGVKL--QWAVDIDKHALETYQLNFHEVEVEHS---DFFSF 375
Query: 345 LKEWAKL-----------CQYFSIYDTDKVPEQSLN 369
L +K CQ +S T P N
Sbjct: 376 LTNDSKFLRVDIAHCSPPCQTWSPAHTVPCPRDDAN 411
>gi|449473515|ref|XP_002194219.2| PREDICTED: protein polybromo-1 isoform 1 [Taeniopygia guttata]
Length = 1658
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ E ++ +I I L+E GE + WFYR +T
Sbjct: 968 RTYSQDCSFKNSMYHVGDYVYVEPAETSLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 1027
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD P++ I+ K + V
Sbjct: 1028 F-----HLATRKFLEKEVFKSDYYSKVPVSKILGKCVVMFV 1063
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1169 CHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1227
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
+ + +K VFLS++E+ P+ CI+ K
Sbjct: 1228 -HEPTKMFYKKEVFLSNLEETCPMTCILGK 1256
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V
Sbjct: 1130 IKLPKLRTLDVFSGCGGLSEGF----HQAGI-CETLWAIEMWEPAAQAFRLNNPGSTVFT 1184
Query: 336 EAADDFLSLL 345
E + L L+
Sbjct: 1185 EDCNVLLKLV 1194
>gi|297285620|ref|XP_001088172.2| PREDICTED: protein polybromo-1-like isoform 6 [Macaca mulatta]
Length = 1620
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 923 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 971
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 972 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1026
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1131 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1189
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1190 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1221
>gi|338714647|ref|XP_003363126.1| PREDICTED: protein polybromo-1 [Equus caballus]
Length = 1602
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 913 RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNET 972
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 973 F-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1008
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1113 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1171
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1172 -HEPTKMFYKKEVFLSNLEESCPMTCILGKCAV 1203
>gi|411007690|ref|ZP_11384019.1| putative methyltransferase [Streptomyces globisporus C-1027]
Length = 408
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 277 GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE 336
G + ++DL++GCG ++ G+ A V L R A+D K K N P+ V+
Sbjct: 18 GVGSLRVVDLFAGCGGLTLGVAQAAHKRDVSLDVRLAVDFEAAPTKVFKANFPKANVQEG 77
Query: 337 AADDFL 342
+ + +
Sbjct: 78 SVESYF 83
>gi|354465735|ref|XP_003495332.1| PREDICTED: protein polybromo-1-like [Cricetulus griseus]
Length = 1702
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1158 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1216
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1217 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1248
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 947 SSGTAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 998
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF S+ + P++ I+ K + V
Sbjct: 999 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSNYYNKVPVSKILGKCVVMFV 1053
>gi|238793797|ref|ZP_04637418.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC
29909]
gi|238726861|gb|EEQ18394.1| Cytosine-specific methyltransferase [Yersinia intermedia ATCC
29909]
Length = 365
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 266 ISSETGSNSPIGEPE-MSLLDLYSGCGAMSTGLCIGASL-----SGVKLVTRWAIDINPH 319
IS SNS + E L+ L+SGCG M G C S K WA + NP+
Sbjct: 44 ISMALASNSDFFQKEKYKLISLFSGCGGMDLGFCGNFSFLNKEYKKTKFEIIWANEFNPN 103
Query: 320 ACKSLK--FNH 328
A K+ K F+H
Sbjct: 104 AVKTYKKNFSH 114
>gi|350415036|ref|XP_003490512.1| PREDICTED: protein polybromo-1-like [Bombus impatiens]
Length = 1651
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA+I ++ + DG+ YFK W + V
Sbjct: 1112 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPAE-VPH 1169
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1170 APTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYICSRPTEIPEDDVYICESLYD 1227
>gi|149034194|gb|EDL88964.1| rCG42310 [Rattus norvegicus]
Length = 1894
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 869 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 920
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 921 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 975
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 6 ENRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHPEAAV 56
>gi|255089056|ref|XP_002506450.1| predicted protein [Micromonas sp. RCC299]
gi|226521722|gb|ACO67708.1| predicted protein [Micromonas sp. RCC299]
Length = 723
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 152 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
++ RI +++ +G+ F RWF E+T A+ R+ VFL++ D+N ++ ++ K
Sbjct: 114 HLCRIECIWQEANGKFMFVGRWFATPEETHTGRQAHH-SRREVFLTNNTDENCVDSLLRK 172
Query: 212 AKIAEVAANMDLEAKQKNIPPCDLYYDMKY 241
A + A + EA ++ C+ YD +
Sbjct: 173 AASNKDPALVAAEAAGDDVFLCEYTYDQHF 202
>gi|327265803|ref|XP_003217697.1| PREDICTED: protein polybromo-1-like isoform 4 [Anolis carolinensis]
Length = 1579
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1121 CHYYEQLCYNDLWLKVGDCVFIKSHGLVRPRVGRIEKMWVR-DGAAYFFGPIFIHPEETE 1179
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1180 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1211
>gi|340714787|ref|XP_003395905.1| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1-like [Bombus
terrestris]
Length = 1649
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA+I ++ + DG+ YFK W + V
Sbjct: 1112 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQIDAIWSTKDGKCYFKGPWLLMPAE-VPH 1169
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1170 APTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYICSRPTEIPEDDVYICESLYD 1227
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 168 YFKARWFYRAEDTVIKD-LAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAK 226
+ K + YR E+T + + D ++ S+ E P C+V K + + N+D+ +
Sbjct: 753 HIKVKKLYRPENTFKSESMKGRSDLNMLYWSEEEVTLPFTCVVGKCYLT-YSENLDISVE 811
Query: 227 QKNIP-PCDLYYDMKYT---------------LPHLTFSNINNESNRRDSDASSTISSET 270
+ + P Y+ Y+ + L + +S + +DA I +
Sbjct: 812 EWTVAGPNRFYFTQMYSHKEEEFDEPPSKACSIGKLIKKSDKIKSKSKKADAPKLI--DI 869
Query: 271 GSNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330
+ P + ++ LD+++GCG +S GL +GV + WAI+++ A + + N+P
Sbjct: 870 PPDFPQIKKKLRTLDVFAGCGGLSEGL----HQAGVA-ESSWAIEVDEAAAHAYRLNNPN 924
Query: 331 TKVRNEAADDFL 342
V + +L
Sbjct: 925 AAVFTGDCNAYL 936
>gi|322790256|gb|EFZ15255.1| hypothetical protein SINV_09840 [Solenopsis invicta]
Length = 1587
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q S GD YV A +G IA++ + + DG+ YFK W + V
Sbjct: 1120 YYEQYSTCAGSVKTGDFVYV-ATDGGRQQIAQVDATWSTKDGKCYFKGPWLLMPTE-VPH 1177
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1178 TPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYICSRPTEIPEDDVYICESLYD 1235
>gi|440904166|gb|ELR54712.1| Protein polybromo-1 [Bos grunniens mutus]
Length = 1688
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E + +I I L+E
Sbjct: 936 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPSEVNLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
>gi|292618678|ref|XP_693735.4| PREDICTED: protein polybromo-1 [Danio rerio]
Length = 1581
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + +GD Y+++ + + RI +++ DG YF F E+T
Sbjct: 1111 YYEQLCYNNIWLKVGDCVYIRSHGLVRNRVGRIEKMWVR-DGAAYFFGPIFIHPEETE-H 1168
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
+ + +K VFLS++E+ P+ CI K ++
Sbjct: 1169 EPTKMFYKKEVFLSNLEESCPMTCIGGKCTVS 1200
>gi|148692841|gb|EDL24788.1| mCG127729 [Mus musculus]
Length = 1900
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 869 SSGTTGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 920
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 921 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 975
>gi|302851483|ref|XP_002957265.1| hypothetical protein VOLCADRAFT_98336 [Volvox carteri f.
nagariensis]
gi|300257360|gb|EFJ41609.1| hypothetical protein VOLCADRAFT_98336 [Volvox carteri f.
nagariensis]
Length = 1782
Score = 40.0 bits (92), Expect = 2.1, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 118 VLQARCHYTQASVDGCLYNLGDDAYVKAE-EGAVDYIARIVELFESVD----GEPY-FKA 171
V + R HY +++ Y++GD Y+ E E YIARI+ F + +P+ +
Sbjct: 547 VQENRIHYNSFTLNDQTYHVGDCVYLYPEDEQFPPYIARILAAFVDRNVQSGADPHCIEV 606
Query: 172 RWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA 218
+WF R + + VF + D NP+ CI K +I + A
Sbjct: 607 KWFERRVNLEPSTKGIEESEREVFELEDTDINPIGCISGKCRIVKAA 653
Score = 38.1 bits (87), Expect = 8.9, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 121 ARCHYTQASVDGCLYNLGDDAYVKAE-EGAVDYIARIVELFESVDG---EPY-FKARWFY 175
+R Y +++G Y LGD AY+ E +G Y+ RI+ F G +P+ + W+
Sbjct: 883 SRTDYAGFNLNGVEYKLGDCAYLYPEDDGMPPYVGRILACFHDRSGRAADPHCVEVAWYE 942
Query: 176 RAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKA 212
R DR+ V L + D NP+ CI KA
Sbjct: 943 RRAHLEPDPHGGNWDREVVALEET-DTNPIGCISGKA 978
>gi|452203100|ref|YP_007483233.1| putative modification methylase [Dehalococcoides mccartyi DCMB5]
gi|452110159|gb|AGG05891.1| putative modification methylase [Dehalococcoides mccartyi DCMB5]
Length = 538
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 335
I E + S++DL++G G +S G L + + A + NP+A K+ ++NHP T V
Sbjct: 4 ISEKKYSVVDLFAGAGGLSYGF-----LQTGRYEIKAAFEDNPNAQKTYRYNHPGTAVYG 58
Query: 336 EAAD 339
+ ++
Sbjct: 59 DVSE 62
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ K NH E+
Sbjct: 1109 EYRLATLDIFAGCGGLSEGL----QQAGVS-TTKWAIEYEEPAGEAFKLNHAES 1157
>gi|119585647|gb|EAW65243.1| polybromo 1, isoform CRA_e [Homo sapiens]
Length = 1100
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
AAG+S + R + S +Y++GD YV+ AE +I I L+E
Sbjct: 905 AAGLSGLH-----------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 953
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 954 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1008
>gi|307180267|gb|EFN68300.1| Protein polybromo-1 [Camponotus floridanus]
Length = 1644
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + GD YV A +G IA++ ++ + DG+ YFK W + V
Sbjct: 1111 YYEQYNTCAGSVKTGDFVYV-ATDGGRQQIAQVDAIWSTKDGKCYFKGPWLLMPTE-VPH 1168
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI---AEVAANMDLEAKQKNIPPCDLYYD 238
L ++ +FLS V+ +P+ IV K + E + E + ++ C+ YD
Sbjct: 1169 TPTKLFYKQELFLSTVDGTHPIVAIVGKCAVLDYGEYICSRPTEIPEDDVYICESLYD 1226
>gi|301621606|ref|XP_002940140.1| PREDICTED: BAH and coiled-coil domain-containing protein 1-like
[Xenopus (Silurana) tropicalis]
Length = 2525
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 120 QARCHYTQASVDGC-LYNLGDDA-YVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+AR + +A V G ++GD A ++ A + YI RI ++ES G K +WFY
Sbjct: 2385 KARKLFYKAIVRGKETLHVGDCAVFLSAGRPNLPYIGRIESMWESWGGNMVVKVKWFYHP 2444
Query: 178 EDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
E+T + + + ++ S ED+N + I K ++
Sbjct: 2445 EETKLGK-RHSDGKNALYQSSHEDENDVQTISHKCQV 2480
>gi|93003310|tpd|FAA00238.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 689
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 80 DEALKRYPDRYKYSSKGHKKKKVAAGVSSIG-ALNEEEEVLQARCHYTQASVDGCLYNLG 138
DE +K P + K G KV S +G AL EE + +Y V G + G
Sbjct: 397 DEKVKPSPSKMKVIKAG----KVTT--SWVGEALYEE----GGKVYYPGVRVGGDVIEGG 446
Query: 139 DDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197
+ VK +EG + YI R+V ++ G+ WF RA DT++++ + + +
Sbjct: 447 ECVSVKNKDEGGLPYIGRVVYMWGESGGK-MVHVDWFMRAADTILQETS---QPDELLII 502
Query: 198 DVEDDNPLNCIVSKAKIA 215
D DD + CI K ++
Sbjct: 503 DECDDLSVECIAGKVDVS 520
>gi|133777825|gb|AAI15011.1| PB1 protein [Homo sapiens]
Length = 1615
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1126 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1184
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1185 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1216
>gi|440713893|ref|ZP_20894485.1| DNA (cytosine-5-)-methyltransferase [Rhodopirellula baltica SWK14]
gi|436441276|gb|ELP34532.1| DNA (cytosine-5-)-methyltransferase [Rhodopirellula baltica SWK14]
Length = 132
Score = 40.0 bits (92), Expect = 2.3, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 20/97 (20%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK-----VR 334
+ + +DL++G G GL G +G V A D + HA + K NHP+T+ V+
Sbjct: 5 KFTTIDLFAGVG----GLTEGFKQAGFNAVA--ANDFDEHAAVTFKLNHPKTEFVDGPVQ 58
Query: 335 NEAADDFLSLL-KEWAKL--------CQYFSIYDTDK 362
+ +DDFL+L + +L CQ FS+Y+ +
Sbjct: 59 DITSDDFLALTGMDSGELDVLLGGPPCQAFSVYNHQR 95
>gi|426249415|ref|XP_004018445.1| PREDICTED: protein polybromo-1 isoform 1 [Ovis aries]
Length = 1633
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1144 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1202
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1203 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1234
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E + +I I L+E
Sbjct: 936 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPSEVNLQPHIVCIERLWE 984
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 985 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1039
>gi|449679929|ref|XP_002159964.2| PREDICTED: protein polybromo-1-like [Hydra magnipapillata]
Length = 990
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYI--ARIVELFESVDGEPYFKARWFYRAEDT- 180
+Y + D Y +GD YVK +E DY+ ++I +++ G PYF+ W+ EDT
Sbjct: 431 YYEKYVTDTDSYKIGDGVYVKCDE---DYLLMSKIDKIWTDSRGTPYFQGNWYLTPEDTK 487
Query: 181 -VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQ 227
V L Y K F S VE C+ +++A A ++L Q
Sbjct: 488 HVPTQLFY---EKECFESTVE------CVEMLSQVAGKCAILNLRDYQ 526
>gi|426249419|ref|XP_004018447.1| PREDICTED: protein polybromo-1 isoform 3 [Ovis aries]
Length = 1601
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1112 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1170
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1171 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1202
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E + +I I L+E
Sbjct: 904 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPSEVNLQPHIVCIERLWE 952
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 953 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1007
>gi|338714651|ref|XP_003363127.1| PREDICTED: protein polybromo-1 [Equus caballus]
Length = 1582
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEESCPMTCILGKCAV 1210
>gi|297742521|emb|CBI34670.3| unnamed protein product [Vitis vinifera]
Length = 1085
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 122 RCHYTQASVDGCLYNLGDDAY-VKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R HY DG Y+L D V +E Y+A I ++ ++ +G +WFYR E+
Sbjct: 56 RSHYEAFEFDGNRYDLEDPVLLVPEDEKQKPYVAIIKDITQTREGSIMVTGQWFYRPEEA 115
Query: 181 VIKDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK 228
K D + +F S D+ P ++ K + V N L +++
Sbjct: 116 EKKGGGSWKSSDTRELFYSFHRDEVPAESVMHKCVVHFVPLNKQLPNRKQ 165
>gi|91089179|ref|XP_974235.1| PREDICTED: similar to DNA cytosine-5 methyltransferase [Tribolium
castaneum]
Length = 579
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE 336
+M +L+LYSG G M L +SGV+ + A+DINP A K N P + N
Sbjct: 250 KMEILELYSGIGGMHWAL----KVSGVEGTIKAAVDINPTANSVYKHNFPHINLLNR 302
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur
garnettii]
Length = 1620
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 109 IGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEP 167
I + E + + +Y + +D +GD V ++ + Y+AR+ L+E
Sbjct: 735 ISWIGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQ 794
Query: 168 YFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F A WF DTV L D +FL D +D L+ I SK K+
Sbjct: 795 MFHAHWFCAGTDTV---LGATSDPLELFLVDECEDMQLSYIYSKVKV 838
>gi|220926789|ref|YP_002502091.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060]
gi|219951396|gb|ACL61788.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060]
Length = 358
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 283 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
L+DL+ GCG GL +GA +G+K+ ++D +P S FNHP++++
Sbjct: 2 LIDLFCGCG----GLSLGARSAGLKVTL--SVDNDPILTSSYTFNHPQSRL 46
>gi|11385354|gb|AAG34760.1|AF197569_1 BAF180 [Homo sapiens]
Length = 1582
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|296474891|tpg|DAA17006.1| TPA: polybromo 1 isoform 2 [Bos taurus]
Length = 1619
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1130 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1188
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1189 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1220
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E + +I I L+E
Sbjct: 922 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPSEVNLQPHIVCIERLWE 970
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 971 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1025
>gi|348507891|ref|XP_003441489.1| PREDICTED: protein polybromo-1-like [Oreochromis niloticus]
Length = 1588
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + +GD Y+ A G V + +E DG YF F E+T
Sbjct: 1112 YYEQLCYNNLWLKVGDCVYI-ASHGLVPHRVGRIEKMWMRDGAGYFFGPIFIHPEETE-H 1169
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
+ + +K VFLS++E+ P+ CI+ K ++
Sbjct: 1170 EPTKMFYKKEVFLSNLEETCPMTCIIGKCVVS 1201
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L++ G+ + WFYR +T
Sbjct: 914 RTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGQSWLYGCWFYRPNET 973
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 974 F-----HLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFV 1009
>gi|392333514|ref|XP_003752915.1| PREDICTED: protein polybromo-1-like [Rattus norvegicus]
gi|392353772|ref|XP_003751596.1| PREDICTED: protein polybromo-1-like isoform 3 [Rattus norvegicus]
Length = 1582
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P++CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMSCILGKCAV 1210
>gi|432953850|ref|XP_004085447.1| PREDICTED: protein polybromo-1-like, partial [Oryzias latipes]
Length = 607
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
++ Q + + LGD Y+++ + +ARI +L+ +G +F F E+T
Sbjct: 151 YFEQLCYNNMWFKLGDCVYIQSHGLSKPRVARIEKLWLQ-NGTTFFFGPIFIHPEETE-H 208
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
+ + ++ VFLS +E+ P+ C++ K ++
Sbjct: 209 EPTKMFYKREVFLSHLEETLPMTCVLGKCMVS 240
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
++ Q + + LGD Y+++ + +ARI +L+ +G +F F E+T
Sbjct: 463 YFEQLCYNNMWFKLGDCVYIQSHGLSKPRVARIEKLWLQ-NGTTFFFGPIFIHPEETE-H 520
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIA 215
+ + ++ VFLS +E+ P+ C++ K ++
Sbjct: 521 EPTKMFYKREVFLSHLEETLPMTCVLGKCMVS 552
>gi|218848105|ref|YP_002454768.1| DNA-cytosine methyltransferase [Bacillus cereus G9842]
gi|218546236|gb|ACK98629.1| DNA-cytosine methyltransferase [Bacillus cereus G9842]
Length = 438
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 17/88 (19%)
Query: 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE----- 336
++ ++SGCG + TG S + AI+++ AC + K NHPET+V N
Sbjct: 7 GVIGIFSGCGGLDTGF------SEYDFNVQLAIELDSDACDTYKKNHPETEVWNRDIKTV 60
Query: 337 AADDFLSLLKEWAKL------CQYFSIY 358
D+ L+ + CQ FSI+
Sbjct: 61 KGDEIRKLVGNKPLILLGGSPCQSFSIF 88
>gi|7023493|dbj|BAA91982.1| unnamed protein product [Homo sapiens]
Length = 289
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFE 161
++G + + L+ R + S +Y++GD YV+ AE +I I L+E
Sbjct: 91 SSGAAGLSGLH--------RTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE 142
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 143 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 197
Query: 218 AANMDL 223
L
Sbjct: 198 KEYFKL 203
>gi|410919647|ref|XP_003973295.1| PREDICTED: protein polybromo-1-like [Takifugu rubripes]
Length = 1577
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L++ GE + WFYR +T
Sbjct: 913 RTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEKWLYGCWFYRPNET 972
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEA---KQKNIPPC 233
+L R K VF SD + P++ I+ K + V L+ K +++ C
Sbjct: 973 F-----HLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLQPEGFKAEDVYVC 1027
Query: 234 DLYYDMK 240
+ Y K
Sbjct: 1028 ESRYSAK 1034
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + +GD Y+ A G V + +E DG YF F E+T
Sbjct: 1111 YYEQLCYNNLWLKVGDCVYI-ASHGLVRHRVGRIEKMWIRDGAGYFFGPIFIHPEETE-H 1168
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
+ + +K VFLS++E+ P+ CI+ K
Sbjct: 1169 EPTKMFYKKEVFLSNLEEACPMTCIIGK 1196
>gi|297463616|ref|XP_583018.5| PREDICTED: LOW QUALITY PROTEIN: protein polybromo-1 [Bos taurus]
gi|297488619|ref|XP_002697063.1| PREDICTED: protein polybromo-1 isoform 1 [Bos taurus]
gi|296474890|tpg|DAA17005.1| TPA: polybromo 1 isoform 1 [Bos taurus]
Length = 1601
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1112 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1170
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1171 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1202
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE 161
AAG+S + R + S +Y++GD YV+ E + +I I L+E
Sbjct: 904 AAGLSGL-----------HRTYSQDCSFKNSMYHVGDYVYVEPSEVNLQPHIVCIERLWE 952
Query: 162 SVDGEPYFKARWFYRAEDTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
GE + WFYR +T +L R K VF SD + P++ I+ K + V
Sbjct: 953 DSAGEKWLYGCWFYRPNETF-----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFV 1007
>gi|307183127|gb|EFN70044.1| Bromo adjacent-like proteiny domain-containing 1 protein
[Camponotus floridanus]
Length = 1002
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKA--EEGAVDYIARIVELFESVD-GEPYFKAR 172
EE RC+ + + G + D +K+ +G + Y+A+I L+E+ D GE F
Sbjct: 833 EETAIRRCYASMSHESGDVLRPRDCVLLKSGTRKGDLPYVAKIAALWENPDDGEMMFSLL 892
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
W+YR E T + + VF S D N + CI K I
Sbjct: 893 WYYRPEHTEQGRTPHDSE-DEVFASRHRDANSVACIEDKCYI 933
>gi|332816980|ref|XP_516515.3| PREDICTED: protein polybromo-1 isoform 2 [Pan troglodytes]
Length = 1582
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|93102371|ref|NP_060783.3| protein polybromo-1 [Homo sapiens]
gi|119585652|gb|EAW65248.1| polybromo 1, isoform CRA_j [Homo sapiens]
Length = 1582
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 24/229 (10%)
Query: 132 GCLYNLGDDAYVKAEEGAVD--YIARIVE---------LFESVDGEPYFKARWFYRAEDT 180
G Y++ D Y++ E D IA+I+E L+ SVD Y + RAE
Sbjct: 694 GVTYHVDDFVYIRQELDKTDVYLIAQIIEVHRSTHLEKLYHSVDLRVYQRCDLILRAETR 753
Query: 181 VIKDLAYLVDRKRVFLSDVEDDN-PLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDM 239
L + D +R+F SD D + I KA + ++ D E + Y D
Sbjct: 754 AEFGL-WETDERRLFRSDTYVDGVDVRYIEGKAFVVHRSSLSDDELENWCTHDDHFYVDC 812
Query: 240 KYTLPHLTFSN----INNESNRRDSDASSTISSETGSNSPIGEPEMSL--LDLYSGCGAM 293
K SN ++ +S R + + + L L+L++G G +
Sbjct: 813 KAKSDKPRSSNEFEPLSRKSFRTCHKCVGLRKEQLTEQQELMDSHSPLRGLELFAGAGGL 872
Query: 294 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342
STG SG + T WA+++ AC + + NHP +V + + + L
Sbjct: 873 STGF----DESGY-VKTMWAVELGASACLTYEENHPYAQVYHGSVNTTL 916
>gi|395733672|ref|XP_003776273.1| PREDICTED: protein polybromo-1 isoform 2 [Pongo abelii]
Length = 1582
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|410951353|ref|XP_003982362.1| PREDICTED: protein polybromo-1 isoform 5 [Felis catus]
Length = 1581
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1119 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1177
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1178 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1209
>gi|332216169|ref|XP_003257217.1| PREDICTED: protein polybromo-1 isoform 2 [Nomascus leucogenys]
Length = 1582
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|225426420|ref|XP_002270094.1| PREDICTED: uncharacterized protein LOC100251356 isoform 1 [Vitis
vinifera]
Length = 595
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 122 RCHYTQASVDGCLYNLGDDAY-VKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R HY DG Y+L D V +E Y+A I ++ ++ +G +WFYR E+
Sbjct: 84 RSHYEAFEFDGNRYDLEDPVLLVPEDEKQKPYVAIIKDITQTREGSIMVTGQWFYRPEEA 143
Query: 181 VIKDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK 228
K D + +F S D+ P ++ K + V N L +++
Sbjct: 144 EKKGGGSWKSSDTRELFYSFHRDEVPAESVMHKCVVHFVPLNKQLPNRKQ 193
>gi|426249417|ref|XP_004018446.1| PREDICTED: protein polybromo-1 isoform 2 [Ovis aries]
Length = 1581
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1119 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1177
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1178 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1209
>gi|402859867|ref|XP_003894358.1| PREDICTED: protein polybromo-1 isoform 2 [Papio anubis]
Length = 1582
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|348588803|ref|XP_003480154.1| PREDICTED: protein polybromo-1-like isoform 4 [Cavia porcellus]
Length = 1582
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|291393829|ref|XP_002713291.1| PREDICTED: polybromo 1 isoform 5 [Oryctolagus cuniculus]
Length = 1582
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|213408295|ref|XP_002174918.1| chromatin structure-remodeling complex protein rsc1
[Schizosaccharomyces japonicus yFS275]
gi|212002965|gb|EEB08625.1| chromatin structure-remodeling complex protein rsc1
[Schizosaccharomyces japonicus yFS275]
Length = 880
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 131 DGCLYNLGDDAYV-KAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLV 189
D L ++GD ++ + IA+I ++++ V+G PY A W+YR E TV +
Sbjct: 352 DDGLLSVGDWVHIYNQNDPNKPIIAQIFKIWKGVEGVPYVTACWYYRPEQTV-----HRA 406
Query: 190 DR----KRVFLSDVEDDNPLNCIVSK 211
DR VF + D+P++ IV +
Sbjct: 407 DRVFYENEVFKTSQYRDHPVSEIVGR 432
>gi|403291079|ref|XP_003936627.1| PREDICTED: protein polybromo-1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1582
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 800 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 858
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 859 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 890
>gi|359474210|ref|XP_003631417.1| PREDICTED: uncharacterized protein LOC100251356 isoform 2 [Vitis
vinifera]
Length = 584
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 122 RCHYTQASVDGCLYNLGDDAY-VKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R HY DG Y+L D V +E Y+A I ++ ++ +G +WFYR E+
Sbjct: 84 RSHYEAFEFDGNRYDLEDPVLLVPEDEKQKPYVAIIKDITQTREGSIMVTGQWFYRPEEA 143
Query: 181 VIKDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK 228
K D + +F S D+ P ++ K + V N L +++
Sbjct: 144 EKKGGGSWKSSDTRELFYSFHRDEVPAESVMHKCVVHFVPLNKQLPNRKQ 193
>gi|345786740|ref|XP_859081.2| PREDICTED: protein polybromo-1 isoform 5 [Canis lupus familiaris]
Length = 1582
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|359078266|ref|XP_003587682.1| PREDICTED: protein polybromo-1 [Bos taurus]
Length = 1581
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1119 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1177
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1178 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1209
>gi|322787657|gb|EFZ13681.1| hypothetical protein SINV_13606 [Solenopsis invicta]
Length = 757
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 116 EEVLQARCHYTQASVDGCLYNLGDDAYVKA--EEGAVDYIARIVELFESVD-GEPYFKAR 172
EE RC+ + + G + D +K+ +G + Y+A+I L+E+ D GE F
Sbjct: 588 EETAIRRCYASMSHESGDVLRPRDCVLLKSGTRKGDLPYVAKIAALWENPDDGEMMFSLL 647
Query: 173 WFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
W+YR E T + + VF S D N + CI K I
Sbjct: 648 WYYRPEHTEQGRTPHDSE-DEVFASRHRDANSVACIEDKCYI 688
>gi|16183002|gb|AAL13608.1| GH14389p [Drosophila melanogaster]
Length = 967
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 35/168 (20%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K Q+++P +L PP + + ++ + + ++ K + GA LN
Sbjct: 737 RKRQRHRPGGVSYELDVTQPPATKANVVPKWNNGWMWAGKAFQ-----------GAVFLN 785
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 786 SDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 845
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCIVSK 211
W+YR E T D+ R V+ S D N + C+ K
Sbjct: 846 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACVEDK 884
>gi|255551070|ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus communis]
gi|223544403|gb|EEF45924.1| hypothetical protein RCOM_0803370 [Ricinus communis]
Length = 730
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYR-------- 176
Y + DG Y L D Y+ A+ YI +I++++E+ D K WF+R
Sbjct: 30 YESFTFDGVEYMLYDSVYMYADIETEPYIGKIIKIWENSDKTKRVKILWFFRPCEISNYL 89
Query: 177 -AEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
A +T +L +L V L++V NPL I K +
Sbjct: 90 EANETSKNEL-FLASGDGVGLANV---NPLEAIAGKCNV 124
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 802
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 803 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 802
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 803 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|94968156|ref|YP_590204.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis
Ellin345]
gi|94550206|gb|ABF40130.1| DNA-cytosine methyltransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 359
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 257 RRDSDASSTISSETG-----------SNSPIGEPEMSLLDLYSGCGAMSTGLCIGASLSG 305
RRDSD S+ E G S P G+ + L+L +G G + GL +G
Sbjct: 9 RRDSD-SAPFLLEVGYEAENPWRIAESQPPKGKSGLVTLELCAGAGGQALGL----EQAG 63
Query: 306 VKLVTRWAIDINPHACKSLKFNHPETKV 333
+ V ++IN HAC++L+ N P KV
Sbjct: 64 INHVA--LVEINKHACETLRLNRPNWKV 89
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 818
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 819 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 802
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 803 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|319803068|ref|NP_001003535.2| polybromo 1, like [Danio rerio]
Length = 1587
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 121 ARCHYTQ-ASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAE 178
++ Y+Q S + Y++GD YV+ AE ++ I +L++ G+ + WFYR E
Sbjct: 914 SQSSYSQDCSFENNTYSIGDYVYVQPAEANLQPHVVCIEKLWKDESGQQWMYGCWFYRPE 973
Query: 179 DTVIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCD 234
+T +L R K +F SD + P + I+ K + V L+ + P D
Sbjct: 974 ETF-----HLATRKFLEKEIFKSDYNNRVPFSKILGKCFVLFVKDYFKLQP--EGFKPED 1026
Query: 235 LYY-DMKYTLPHLTFSNI 251
+Y + +YT+ F I
Sbjct: 1027 VYVCESRYTVRTKAFKKI 1044
>gi|344276623|ref|XP_003410107.1| PREDICTED: protein polybromo-1 isoform 3 [Loxodonta africana]
Length = 1582
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 123 CHY-TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
CHY Q + +GD ++K+ + RI +++ DG YF F E+T
Sbjct: 1120 CHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR-DGAAYFYGPIFIHPEETE 1178
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
+ + +K VFLS++E+ P+ CI+ K +
Sbjct: 1179 -HEPTKMFYKKEVFLSNLEETCPMTCILGKCAV 1210
>gi|66360318|pdb|1W4S|A Chain A, Crystal Structure Of The Proximal Bah Domain Of Polybromo
Length = 174
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 125 YTQ-ASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
Y+Q S +Y++GD YV+ AE +I I L+E GE + WFYR +T
Sbjct: 16 YSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETF- 74
Query: 183 KDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDL 223
+L R K VF SD + P++ I+ K + V L
Sbjct: 75 ----HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKL 115
>gi|300867524|ref|ZP_07112175.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
gi|300334518|emb|CBN57345.1| putative Modification methylase HgiDII [Oscillatoria sp. PCC 6506]
Length = 361
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ +DL+ GCG ++ GL + +++V A+D NP CK+ K NHP +
Sbjct: 19 LTAVDLFCGCGGVTEGL----TNHNIRVVA--AVDNNPIVCKTYKINHPNVNL 65
>gi|226532333|ref|NP_001151602.1| BAH domain containing protein [Zea mays]
gi|195648046|gb|ACG43491.1| BAH domain containing protein [Zea mays]
Length = 638
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
HY +G + L D + E+ I++ DG Y +WFYR E+ K
Sbjct: 152 HYASFEYEGNSFELEDPVLLTPEDSNQKPYVAILKDITETDGSLYVTGQWFYRPEEADKK 211
Query: 184 DLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
+ + V D + +F S DD P ++ K + + +QK IP
Sbjct: 212 EGGFWVARDTRELFYSFHTDDVPAESVMHKCVVHFI-------PQQKQIP 254
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 338
P+ LD++SGCG +S G +G+ + WAI++ A ++ + N+P T V E
Sbjct: 986 PKYRTLDVFSGCGGLSEGF----HQAGIS-ESLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1040
Query: 339 DDFLSLL 345
+ L L+
Sbjct: 1041 NVLLKLV 1047
>gi|47229623|emb|CAG06819.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1678
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L++ GE + WFYR +T
Sbjct: 967 RTYSQDCSFKDSMYHVGDYVYVEPAEANLQPHIIYIERLWQDDTGEKWLYGCWFYRPNET 1026
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLE 224
+L R K VF SD + P++ I+ K + V L+
Sbjct: 1027 F-----HLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLQ 1069
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 183
+Y Q + +GD Y+ A G V + +E DG YF F E+T
Sbjct: 1165 YYEQLCYNNLWLKVGDCVYI-ASHGLVRHRVGRIEKMWIRDGAGYFFGPIFIHPEETE-H 1222
Query: 184 DLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
+ + +K VFLS++E+ P+ CI+ K
Sbjct: 1223 EPTKMFYKKEVFLSNLEEACPMTCIIGK 1250
>gi|432857024|ref|XP_004068516.1| PREDICTED: protein polybromo-1-like [Oryzias latipes]
Length = 1603
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDT 180
R + S +Y++GD YV+ AE +I I L++ GE + WFYR +T
Sbjct: 911 RTYSQDCSFKDSMYHVGDCVYVEPAESNLQPHIICIERLWQDDTGEKWLYGCWFYRPNET 970
Query: 181 VIKDLAYLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEV 217
+L R K VF SD + P++ I+ K + V
Sbjct: 971 F-----HLATRKFLEKEVFKSDYYNKTPISKILGKCVVMFV 1006
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2
[Loxodonta africana]
Length = 1625
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 753 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 812
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 813 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 843
>gi|5870276|gb|AAD54507.1|AC010077_1 MTDM_HUMAN [AA 1- 966] [Homo sapiens]
Length = 966
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 623 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 682
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 683 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 713
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1 isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|403215655|emb|CCK70154.1| hypothetical protein KNAG_0D04080 [Kazachstania naganishii CBS
8797]
Length = 916
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 121 ARCHYTQASVDGCLYNLGDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 179
AR + +DG +Y +GD +K ++ I +I L+ DG+ + A W++R E
Sbjct: 395 ARVPLDEVVLDGKVYRIGDWVLIKNPDDVNKPTIGQIFRLWNMPDGKKWLNACWYFRPEQ 454
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSK 211
TV + + L + V + D+P++ +V K
Sbjct: 455 TVHR-VDRLFYKNEVMKTGHYRDSPVDDVVGK 485
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1
[Loxodonta africana]
Length = 1611
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 739 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 798
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 799 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 829
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 669 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 727
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 728 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 759
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 819
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 820 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 819
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 820 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
++ LD+++GCG +S GL +GV L T+WAI+ A ++ NHP+
Sbjct: 25 LATLDVFAGCGGLSEGL----QQAGVSL-TKWAIEYEEPAGEAFHLNHPDA 70
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 731 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 790
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 791 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 821
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 819
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 820 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1 [Pongo abelii]
Length = 1602
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 731 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 790
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 791 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 821
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 806 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 865
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 866 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 896
>gi|432869260|ref|XP_004071699.1| PREDICTED: BAH and coiled-coil domain-containing protein 1-like
[Oryzias latipes]
Length = 1880
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 120 QARCHYTQASVDGC-LYNLGDDA-YVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRA 177
+AR + +A V G + +GD A ++ + Y+ +I L+ES K +WFY
Sbjct: 1739 KARKLFYKAIVRGRDIMRVGDCAVFLSDGRPNLPYVGQIESLWESWTSRMVVKVKWFYHP 1798
Query: 178 EDTVIKDLAYLVDRKR-VFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK-NIPPCDL 235
E+T + L D K ++ S ED+N + I K ++ L QK N P DL
Sbjct: 1799 EETKMGK--RLRDGKHALYQSCHEDENDVQTISHKCRVVSREEYECLTGNQKSNSAPQDL 1856
Query: 236 YY 237
YY
Sbjct: 1857 YY 1858
>gi|413948207|gb|AFW80856.1| hypothetical protein ZEAMMB73_835719 [Zea mays]
Length = 444
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 179
+ + HY +G + L D + E+ I++ DG Y +WFYR E+
Sbjct: 111 KQKKHYASFEYEGNSFELEDPVLLTPEDSNQKPYVAILKDITETDGSLYVTGQWFYRPEE 170
Query: 180 TVIKDLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
K+ + V D + +F S DD P ++ K + + +QK IP
Sbjct: 171 ADKKEGGFWVARDTRELFYSFHTDDVPAESVMHKCVVHFI-------PQQKQIP 217
>gi|260801263|ref|XP_002595515.1| hypothetical protein BRAFLDRAFT_118959 [Branchiostoma floridae]
gi|229280762|gb|EEN51527.1| hypothetical protein BRAFLDRAFT_118959 [Branchiostoma floridae]
Length = 2940
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 137 LGDDA-YVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRK-RV 194
+GD A ++ + Y+ RI L+ES G K +WFY E+T++ A VD K +
Sbjct: 2820 VGDSAVFMSTGRPNLPYVGRIENLWESWGGNMVVKVKWFYHPEETIVGRRA--VDGKMAL 2877
Query: 195 FLSDVEDDNPLNCIVSKAKI 214
+ S D+N + I + ++
Sbjct: 2878 YQSSHVDENDVQTISHRCEV 2897
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 806 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 865
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 866 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 896
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 759 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 818
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 819 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 849
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 740 KIYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGIDT 799
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 800 V---LGATSDPLELFLVDEGEDMQLSYIHSKVKV 830
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 918 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 977
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 978 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 1008
>gi|22328569|ref|NP_192893.2| bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
gi|19347810|gb|AAL86355.1| unknown protein [Arabidopsis thaliana]
gi|22136724|gb|AAM91681.1| unknown protein [Arabidopsis thaliana]
gi|332657624|gb|AEE83024.1| bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
Length = 587
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R H+ Q + DG Y+L + E+ + Y+A I ++ ++ DG +WFYR E+
Sbjct: 118 RTHFNQFAYDGNTYDLEVPVLLVPEDKSQKPYVAIIKDITQTKDGSMMILGQWFYRPEEA 177
Query: 181 VIKDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
+ D + +F S D+ P ++ + + V A+ L K+KN P
Sbjct: 178 EKRGGGNWQSSDTRELFYSFHRDEVPAESVMHRCVVYFVPAHKQL-PKRKNNP 229
>gi|380026948|ref|XP_003697200.1| PREDICTED: uncharacterized protein LOC100865599 [Apis florea]
Length = 994
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 112 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD--YIARIVELFESVD-GEPY 168
L EE ++ RC+ + G + D +K+ D ++A+I L+E+ D GE
Sbjct: 822 LTNEESAIR-RCYASMKHESGDILRPRDCVLLKSGPRKADLPFVAKIAALWENPDDGEMM 880
Query: 169 FKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F W+YR E T Y + VF S D N + CI K I
Sbjct: 881 FSLLWYYRPEHTEQGRTQYDTE-DEVFASRHRDANSVACIEDKCYI 925
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 639 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 698
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 699 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 729
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339
+M +LD + G G ++ G+ G+ + T++A+D + A K+ NHP V ++ A+
Sbjct: 210 KMQMLDPFCGAGGLTAGIERGSRC----IQTKFAVDSDEEAAKAFAKNHPHATVFHDDAN 265
Query: 340 DFLSLLKE 347
FL+ L +
Sbjct: 266 SFLTSLDQ 273
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 623 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 682
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 683 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 713
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 639 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 698
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 699 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 729
>gi|410919869|ref|XP_003973406.1| PREDICTED: protein polybromo-1-like [Takifugu rubripes]
Length = 1622
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 115 EEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARW 173
+EE R + S + Y +GD YV+ E + +I I L++ GE + W
Sbjct: 899 KEESENERVYVQDCSFENNTYRVGDFVYVEPSESKLQPHIVSIERLWKDKAGETWLYGCW 958
Query: 174 FYRAEDTVIKDLAYLVDRK----RVFLSDVEDDNPLNCIVSKAKIAEV 217
FYR +T +L RK VF D + P N ++ K + V
Sbjct: 959 FYRPTETF-----HLATRKFLENEVFKGDYYNKVPFNKVLGKCVVMFV 1001
>gi|413948206|gb|AFW80855.1| BAH domain containing protein, partial [Zea mays]
Length = 496
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 179
+ + HY +G + L D + E+ I++ DG Y +WFYR E+
Sbjct: 148 KQKKHYASFEYEGNSFELEDPVLLTPEDSNQKPYVAILKDITETDGSLYVTGQWFYRPEE 207
Query: 180 TVIKDLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
K+ + V D + +F S DD P ++ K + + +QK IP
Sbjct: 208 ADKKEGGFWVARDTRELFYSFHTDDVPAESVMHKCVVHFI-------PQQKQIP 254
>gi|310817513|ref|YP_003949871.1| cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309390585|gb|ADO68044.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 332
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337
P ++ +++ +G G G IG ++G + V A++I+ HAC +L+ N P+ +V E
Sbjct: 9 RPSLTAIEICAGAG----GQAIGLDMAGFEHVA--AVEIDKHACATLRLNRPQWRVFEED 62
Query: 338 ADDF 341
DF
Sbjct: 63 LKDF 66
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 121 ARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELF-ESVDGEP-YFKARWFYRA 177
+ +Y + +DG +LGD V+ + + +AR+ ++ ES++ + YF A F R+
Sbjct: 491 TKVYYEKVEIDGSELSLGDFVMVETSQSNIPALVARVTYMWKESINPKSGYFHAEVFIRS 550
Query: 178 EDTVIKDLAYLVDRKRVFLSD-VEDDNPLNCIVSKAKI 214
DTV+ ++ D + VFL D PL+ I+ KA +
Sbjct: 551 SDTVLGEVG---DPREVFLGDRCCHGAPLSSILRKAFV 585
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 179
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 408 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 466
Query: 180 TVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
TV L D +FL D +D L+ I SK K+
Sbjct: 467 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 498
>gi|386764782|ref|NP_001245774.1| histone gene-specific epigenetic repressor in late S phase, isoform H
[Drosophila melanogaster]
gi|383293508|gb|AFH07486.1| histone gene-specific epigenetic repressor in late S phase, isoform H
[Drosophila melanogaster]
Length = 1139
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 35/168 (20%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K Q+++P +L PP + + ++ + + ++ K + GA LN
Sbjct: 909 RKRQRHRPGGVSYELDVTQPPATKANVVPKWNNGWMWAGKAFQ-----------GAVFLN 957
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 958 SDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 1017
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCIVSK 211
W+YR E T D+ R V+ S D N + C+ K
Sbjct: 1018 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACVEDK 1056
>gi|37693466|dbj|BAC99051.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 38.9 bits (89), Expect = 5.6, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL SGV T WA++ + +A K+ N+P T+V
Sbjct: 729 LATLDIFAGCGGLSEGL----HQSGVS-STLWAVEFDANAAKAYTENNPHTEV 776
>gi|20278869|dbj|BAB91073.1| chloroplast-resident DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1344
Score = 38.9 bits (89), Expect = 5.6, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 333
++ LD+++GCG +S GL SGV T WA++ + +A K+ N+P T+V
Sbjct: 729 LATLDIFAGCGGLSEGL----HQSGVS-STLWAVEFDANAAKAYTENNPHTEV 776
>gi|195163335|ref|XP_002022506.1| GL13071 [Drosophila persimilis]
gi|194104498|gb|EDW26541.1| GL13071 [Drosophila persimilis]
Length = 889
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 35/168 (20%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K QK++P +L PP + + ++ + + ++ K + GA LN
Sbjct: 644 RKRQKHRPGGVSYELDETQPPATKANVVPKWNNGWMWAGKAFQ-----------GAVFLN 692
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 693 SDDPLVLRTCYPAMRHVEGDIIRTRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 752
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCIVSK 211
W+YR E T D+ R V+ S D N + CI K
Sbjct: 753 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACIEDK 791
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 408 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 467
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK K+
Sbjct: 468 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 498
>gi|85724844|ref|NP_001033855.1| histone gene-specific epigenetic repressor in late S phase, isoform D
[Drosophila melanogaster]
gi|386764778|ref|NP_001245772.1| histone gene-specific epigenetic repressor in late S phase, isoform F
[Drosophila melanogaster]
gi|386764780|ref|NP_001245773.1| histone gene-specific epigenetic repressor in late S phase, isoform G
[Drosophila melanogaster]
gi|84798462|gb|ABC67193.1| histone gene-specific epigenetic repressor in late S phase, isoform D
[Drosophila melanogaster]
gi|383293506|gb|AFH07484.1| histone gene-specific epigenetic repressor in late S phase, isoform F
[Drosophila melanogaster]
gi|383293507|gb|AFH07485.1| histone gene-specific epigenetic repressor in late S phase, isoform G
[Drosophila melanogaster]
Length = 1456
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K Q+++P +L PP + + ++ + + ++ K + GA LN
Sbjct: 1226 RKRQRHRPGGVSYELDVTQPPATKANVVPKWNNGWMWAGKAFQ-----------GAVFLN 1274
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 1275 SDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 1334
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCI 208
W+YR E T D+ R V+ S D N + C+
Sbjct: 1335 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACV 1370
>gi|224141801|ref|XP_002324251.1| predicted protein [Populus trichocarpa]
gi|222865685|gb|EEF02816.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 131 DGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYR--------AEDTVI 182
DG Y L D Y+ E YI ++++++E+ D K WF+R ++ +
Sbjct: 36 DGVDYTLYDSVYMYKEGEPEPYIGKLIKIWENADKTKKVKVLWFFRPREISNYLGDEKTL 95
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
K+ +L + V ++V NPL I K +
Sbjct: 96 KNELFLASGEGVGNANV---NPLEAIAGKCNV 124
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y + +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDGSNGQMFHAHWFCAGTDTV- 801
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
L D +FL D +D L+ I SK K+
Sbjct: 802 --LGATSDPLELFLVDECEDMQLSYIHSKVKV 831
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 91 KYSSKGHK-----KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 145
K + KG K KKK A V+ +G + EV + R +Y A +D GD +
Sbjct: 700 KKAKKGRKLETPLKKKKRAKVTWLG---DPIEVTEERAYYKAAMLDDEKIENGDCVLIHP 756
Query: 146 EEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
++ ++AR++ +++ GE F +WF +TV+ + + D VF D D
Sbjct: 757 DDPTKPLFMARVIYMWQESQGEMMFHRQWFVYGSETVLGETS---DPLEVFPIDECQDTY 813
Query: 205 LNCIVSKAKIAEVAANMD 222
L + +K + A + D
Sbjct: 814 LGSVNAKCTVISGAPSHD 831
>gi|24643419|ref|NP_728309.1| histone gene-specific epigenetic repressor in late S phase, isoform C
[Drosophila melanogaster]
gi|22832621|gb|AAF49024.2| histone gene-specific epigenetic repressor in late S phase, isoform C
[Drosophila melanogaster]
Length = 1280
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K Q+++P +L PP + + ++ + + ++ K + GA LN
Sbjct: 1050 RKRQRHRPGGVSYELDVTQPPATKANVVPKWNNGWMWAGKAFQ-----------GAVFLN 1098
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 1099 SDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 1158
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCI 208
W+YR E T D+ R V+ S D N + C+
Sbjct: 1159 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACV 1194
>gi|301622442|ref|XP_002940536.1| PREDICTED: bromo adjacent homology domain-containing 1 protein-like
[Xenopus (Silurana) tropicalis]
Length = 800
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 103 AAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA--EEGAVDYIARIVELF 160
AA ++ +NE E L R Y +G + + D +K+ + ++ Y+A+I L+
Sbjct: 616 AACEKAVYVVNEPEPAL--RRSYQAVERNGEIIRVRDTVLLKSGPRKKSMPYVAKISALW 673
Query: 161 ESV-DGEPYFKARWFYRAEDTV--IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV 217
E GE W+YR E T + V +K +F S +D+N + CI K +
Sbjct: 674 EEPKTGELMMSLFWYYRPEHTQGGRNPSMHQVIQKEIFASRHQDENSIACIEEKCYVLTF 733
Query: 218 A 218
A
Sbjct: 734 A 734
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 91 KYSSKGHK-----KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 145
K + KG K KKK A V+ +G + EV + R +Y A +D GD +
Sbjct: 700 KKAKKGRKLETPLKKKKRAKVTWLG---DPIEVTEERAYYKAAMLDDEKIENGDCVLIHP 756
Query: 146 EEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
++ ++AR++ +++ GE F +WF +TV+ + + D VF D D
Sbjct: 757 DDPTKPLFMARVIYMWQESQGEMMFHRQWFVYGSETVLGETS---DPLEVFPIDECQDTY 813
Query: 205 LNCIVSKAKIAEVAANMD 222
L + +K + A + D
Sbjct: 814 LGSVNAKCTVISGAPSHD 831
>gi|320167517|gb|EFW44416.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 221
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 134 LYNLGDDAYVK-----AEEGAVDYIARIVELFESVD--GEPYFKARWFYRAEDTVIKDLA 186
++ L D Y+K EG +IA+IV++F + + E + + +W+Y+A DT +DL
Sbjct: 24 VFALHDRVYIKPPSAGGHEGP--FIAQIVDIFSASEPGSEIWIRVKWYYQAADTKARDLP 81
Query: 187 YLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 216
+ + +F++D D P ++ + + +
Sbjct: 82 W-IGESELFVTDHFDVCPAYRVIGQVIVID 110
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y + +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 102 YYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTV- 160
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
L D +FL D +D L+ I SK K+
Sbjct: 161 --LGATSDPLELFLVDECEDMQLSYIHSKVKV 190
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 91 KYSSKGHK-----KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 145
K + KG K KKK A V+ +G + EV + R +Y A +D GD +
Sbjct: 700 KKAKKGRKLETPLKKKKRAKVTWLG---DPIEVTEERAYYKAAMLDDEKIENGDCVLIHP 756
Query: 146 EEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
++ ++AR++ +++ GE F +WF +TV+ + + D VF D D
Sbjct: 757 DDPTKPLFMARVIYMWQESQGEMMFHRQWFVYGSETVLGETS---DPLEVFPIDECQDTY 813
Query: 205 LNCIVSKAKIAEVAANMD 222
L + +K + A + D
Sbjct: 814 LGSVNAKCTVISGAPSHD 831
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 182
+Y + +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 148 YYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTV- 206
Query: 183 KDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
L D +FL D +D L+ I SK K+
Sbjct: 207 --LGATSDPLELFLVDECEDMQLSYIHSKVKV 236
>gi|195479632|ref|XP_002100963.1| GE15879 [Drosophila yakuba]
gi|194188487|gb|EDX02071.1| GE15879 [Drosophila yakuba]
Length = 2480
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K QK +P +L PP + + ++ + + + AG + GA LN
Sbjct: 2250 RKRQKQRPGGVSYELDVTQPPATKANVVPKWNNGWMW-----------AGKAFQGAVFLN 2298
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 2299 SDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 2358
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCI 208
W+YR E T D+ R V+ S D N + C+
Sbjct: 2359 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACV 2394
>gi|434398887|ref|YP_007132891.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428269984|gb|AFZ35925.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 359
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331
++++ L+SGCG GL +G S +G K++ WA D + ++ ++NHP+T
Sbjct: 10 LNIVSLFSGCG----GLDLGFSKAGFKII--WANDCDKEIWQTYQYNHPKT 54
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 91 KYSSKGHK-----KKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 145
K + KG K KKK A V+ +G + EV + R +Y A +D GD +
Sbjct: 700 KKAKKGRKLETPLKKKKRAKVTWLG---DPIEVTEERAYYKAAMLDDEKIENGDCVLIHP 756
Query: 146 EEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNP 204
++ ++AR++ +++ GE F +WF +TV+ + + D VF D D
Sbjct: 757 DDPTKPLFMARVIYMWQESQGEMMFHRQWFVYGSETVLGETS---DPLEVFPIDECQDTY 813
Query: 205 LNCIVSKAKIAEVAANMD 222
L + +K + A + D
Sbjct: 814 LGSVNAKCTVISGAPSHD 831
>gi|24643415|ref|NP_608360.2| histone gene-specific epigenetic repressor in late S phase, isoform A
[Drosophila melanogaster]
gi|386764776|ref|NP_001245771.1| histone gene-specific epigenetic repressor in late S phase, isoform E
[Drosophila melanogaster]
gi|442617048|ref|NP_001259736.1| histone gene-specific epigenetic repressor in late S phase, isoform I
[Drosophila melanogaster]
gi|22832620|gb|AAF49026.2| histone gene-specific epigenetic repressor in late S phase, isoform A
[Drosophila melanogaster]
gi|383293505|gb|AFH07483.1| histone gene-specific epigenetic repressor in late S phase, isoform E
[Drosophila melanogaster]
gi|440216972|gb|AGB95575.1| histone gene-specific epigenetic repressor in late S phase, isoform I
[Drosophila melanogaster]
Length = 2529
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 104 AGVSSIGA--LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELF 160
AG + GA LN ++ ++ C+ V+G + + D +KA E+ + Y+A++ L+
Sbjct: 2336 AGKAFQGAVFLNSDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLW 2395
Query: 161 ESV-DGEPYFKARWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCI 208
++ DGE W+YR E T D+ R V+ S D N + C+
Sbjct: 2396 QNPEDGEMMMSLLWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACV 2443
>gi|28416389|gb|AAO42667.1| GH07949p, partial [Drosophila melanogaster]
Length = 2201
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 104 AGVSSIGA--LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELF 160
AG + GA LN ++ ++ C+ V+G + + D +KA E+ + Y+A++ L+
Sbjct: 2008 AGKAFQGAVFLNSDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLW 2067
Query: 161 ESV-DGEPYFKARWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCIVSK 211
++ DGE W+YR E T D+ R V+ S D N + C+ K
Sbjct: 2068 QNPEDGEMMMSLLWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACVEDK 2118
>gi|194893225|ref|XP_001977837.1| GG19261 [Drosophila erecta]
gi|190649486|gb|EDV46764.1| GG19261 [Drosophila erecta]
Length = 2499
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 104 AGVSSIGA--LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELF 160
AG + GA LN ++ ++ C+ V+G + + D +KA E+ + Y+A++ L+
Sbjct: 2306 AGKAFQGAVFLNSDDPLVLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLW 2365
Query: 161 ESV-DGEPYFKARWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCI 208
++ DGE W+YR E T D+ R V+ S D N + C+
Sbjct: 2366 QNPEDGEMMMSLLWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACV 2413
>gi|383863458|ref|XP_003707198.1| PREDICTED: uncharacterized protein LOC100880619 [Megachile rotundata]
Length = 1776
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 112 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD--YIARIVELFESVD-GEPY 168
L EE ++ RC+ + G + D +K+ D ++A+I L+E+ D GE
Sbjct: 1604 LTNEESAIR-RCYASMKHESGDVLRPRDCVLLKSGPRKADLPFVAKIAALWENPDDGEMM 1662
Query: 169 FKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F W+YR E T Y + VF S D N + CI K I
Sbjct: 1663 FSLLWYYRPEHTEQGRTQYDTE-DEVFASRHRDANSVACIEDKCYI 1707
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 125 YTQASVDGCLYNLGDDAYVKAEE---GAVDYIARIVELFESVDGEPYFKARWFYRAEDTV 181
Y++A V LGD + AEE GA +A + ++++ DG + R R E+TV
Sbjct: 519 YSKAKVGEVQVALGDAVLLAAEEDDEGAP--LALVQAMWQTADGSKEVQVRLLARGEETV 576
Query: 182 IKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV-----------AANMDLEAKQKN- 229
+ D A VFL+ + L IV KA ++++ D E +Q+N
Sbjct: 577 LGDAA---SDSEVFLTTELETRELTSIVEKASVSKLERVWDASKRREQFQQDQELRQRNE 633
Query: 230 -----IPPCDLYYDMKYTLPH 245
P +L++ +Y PH
Sbjct: 634 EAAKEGRPLELFWRRQYA-PH 653
>gi|406916736|gb|EKD55687.1| hypothetical protein ACD_59C00074G0004 [uncultured bacterium]
Length = 341
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE 336
+DL+SGCG +S G+ +G +++ ++I+ A + K NHPET V NE
Sbjct: 7 IDLFSGCGGLSEGM----KKAGAQVIA--CVEIDKVAAECYKINHPETLVINE 53
>gi|449674107|ref|XP_002165939.2| PREDICTED: bromo adjacent homology domain-containing 1 protein-like
[Hydra magnipapillata]
Length = 344
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 145 AEEGAVDYIARIVELFESVDG----EPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVE 200
A +DYIARI ++E G + W+Y+ E K V VF S +
Sbjct: 207 ARRYNLDYIARISAIWEDTSGSYKDDMMISVFWYYKPEQISGKCAEISVGEMEVFASRHQ 266
Query: 201 DDNPLNCIVSKAKI 214
DDN + CIV K +
Sbjct: 267 DDNSVACIVDKCYV 280
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 279 PEMS----LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVR 334
PE+S LD+++GCG +S GL SGV T WAI+ + A + K N+P V
Sbjct: 866 PEISDKLRTLDVFAGCGGLSEGL----HQSGVS-KTLWAIEQDSDAASAFKQNNPNATVF 920
Query: 335 NEAADDFLSLLKE 347
E D +LLKE
Sbjct: 921 TE---DCNTLLKE 930
>gi|350399250|ref|XP_003485468.1| PREDICTED: hypothetical protein LOC100749826 [Bombus impatiens]
Length = 1783
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 112 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD--YIARIVELFESVD-GEPY 168
L EE ++ RC+ + G + D +K+ D ++A+I L+E+ D GE
Sbjct: 1611 LTNEESAIR-RCYASMKHESGDVLRPRDCVLLKSGPRKADLPFVAKIAALWENPDDGEMM 1669
Query: 169 FKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F W+YR E T Y + VF S D N + CI K I
Sbjct: 1670 FSLLWYYRPEHTEQGRTQYDTE-DEVFASRHRDANSVACIEDKCYI 1714
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ K NH
Sbjct: 1089 ENRLATLDIFAGCGGLSEGL----QQAGVS-STKWAIEYEEPAGEAFKLNH 1134
>gi|198469222|ref|XP_002134251.1| GA26030 [Drosophila pseudoobscura pseudoobscura]
gi|198146771|gb|EDY72878.1| GA26030 [Drosophila pseudoobscura pseudoobscura]
Length = 1635
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 59 KKTQKNKPDS---DLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGA--LN 113
+K QK++P +L PP + + ++ + + ++ K + GA LN
Sbjct: 1390 RKRQKHRPGGVSYELDETQPPATKANVVPKWNNGWMWAGKAFQ-----------GAVFLN 1438
Query: 114 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA-EEGAVDYIARIVELFESV-DGEPYFKA 171
++ ++ C+ V+G + D +KA E+ + Y+A++ L+++ DGE
Sbjct: 1439 SDDPLVLRTCYPAMRHVEGDIIRTRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSL 1498
Query: 172 RWFYRAEDTVIKDLAYLVDRKR--------VFLSDVEDDNPLNCIVSKAKI 214
W+YR E T D+ R V+ S D N + CI K +
Sbjct: 1499 LWYYRPEHT---------DQGRQRNDCPDEVYASRHRDHNSVACIEDKCYV 1540
>gi|238559978|gb|ACR46157.1| DNA (cytosine-5) methyltransferase 1 isoform 12b [Ovis aries]
Length = 876
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 737 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 796
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK ++
Sbjct: 797 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 827
>gi|224058512|ref|XP_002299533.1| predicted protein [Populus trichocarpa]
gi|222846791|gb|EEE84338.1| predicted protein [Populus trichocarpa]
Length = 611
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
R HY DG Y L D + E+ Y+A I ++ ++ DG +WFYR E+
Sbjct: 113 RTHYDAFEFDGNRYELEDPVLLVPEDKEQKPYVAIIKDISQTKDGSMMVTGQWFYRPEEA 172
Query: 181 VIKDLAYLVDR--KRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQK 228
K R + +F S D+ P ++ K + V + L +++
Sbjct: 173 ERKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPVHKQLPNRKQ 222
>gi|168035960|ref|XP_001770476.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678184|gb|EDQ64645.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 120 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAE 178
+ R Y VD LY + D + E + Y+A I ++ ++ DG + +WFYR E
Sbjct: 7 KGRALYQAFEVDDNLYEVDDAVLITPESPSQKPYVAIIKKIMQAKDGTVQIEGQWFYRPE 66
Query: 179 DTVIKDLAYLV--DRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229
+ K D + +F S D+ ++ K ++ V N L + K+
Sbjct: 67 EADKKGGGTWASSDSRELFYSFHIDEVSAESVMHKCQVHFVPPNKQLPQRHKH 119
>gi|356570423|ref|XP_003553387.1| PREDICTED: trinucleotide repeat-containing gene 18 protein-like
[Glycine max]
Length = 237
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Query: 124 HYTQASVDGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 182
HY +G Y +GD K EE G Y I ++ + +G +WFYR E+
Sbjct: 53 HYDSFEFNGIQYTIGDHVLFKPEEKGQKPYAGIIKDITQGNNGNVVVTGQWFYRPEEAEK 112
Query: 183 KDLAYL--VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231
K D + +F S DD ++ K + V N L K+K+ P
Sbjct: 113 KGGGNWKSCDSRELFYSFHCDDVHAEAVMHKCVVHFVPQNKQL-PKRKDHP 162
>gi|328776309|ref|XP_003249142.1| PREDICTED: hypothetical protein LOC100577995 [Apis mellifera]
Length = 1779
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 112 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD--YIARIVELFESVD-GEPY 168
L EE ++ RC+ + G + D +K+ D ++A+I L+E+ D GE
Sbjct: 1607 LTNEESAIR-RCYASMKHESGDVLRPRDCVLLKSGPRKADLPFVAKIAALWENPDDGEMM 1665
Query: 169 FKARWFYRAEDTVIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
F W+YR E T Y + + VF S D N + CI K I
Sbjct: 1666 FSLLWYYRPEHTEQGRTQYDTEDE-VFASRHRDANSVACIEDKCYI 1710
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 122 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 180
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 668 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 727
Query: 181 VIKDLAYLVDRKRVFLSDVEDDNPLNCIVSKAKI 214
V L D +FL D +D L+ I SK ++
Sbjct: 728 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 758
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,857,653,901
Number of Sequences: 23463169
Number of extensions: 297797485
Number of successful extensions: 2817005
Number of sequences better than 100.0: 988
Number of HSP's better than 100.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 813
Number of HSP's that attempted gapping in prelim test: 2806974
Number of HSP's gapped (non-prelim): 8408
length of query: 433
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 288
effective length of database: 8,957,035,862
effective search space: 2579626328256
effective search space used: 2579626328256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)