Query 013949
Match_columns 433
No_of_seqs 275 out of 1846
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 20:07:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ft4_B DNA (cytosine-5)-methyl 100.0 9.3E-75 3.2E-79 640.2 16.2 347 64-431 1-472 (784)
2 3swr_A DNA (cytosine-5)-methyl 100.0 1.1E-51 3.9E-56 462.4 17.4 299 120-431 320-709 (1002)
3 3av4_A DNA (cytosine-5)-methyl 100.0 1.2E-49 4.2E-54 455.1 15.3 298 121-431 633-1020(1330)
4 3ubt_Y Modification methylase 100.0 6.2E-31 2.1E-35 261.5 5.6 137 281-431 1-150 (331)
5 4h0n_A DNMT2; SAH binding, tra 99.9 1.7E-28 5.7E-33 246.9 3.9 142 279-431 2-156 (333)
6 1w4s_A Polybromo, polybromo 1 99.9 2.4E-27 8.3E-32 217.8 10.0 136 119-256 11-147 (174)
7 3g7u_A Cytosine-specific methy 99.9 2.9E-28 9.9E-33 248.8 0.3 139 279-431 1-159 (376)
8 2c7p_A Modification methylase 99.9 1.2E-27 4.2E-32 239.9 3.7 139 278-431 9-160 (327)
9 3qv2_A 5-cytosine DNA methyltr 99.9 2E-27 6.9E-32 238.5 3.5 142 278-431 8-167 (327)
10 1g55_A DNA cytosine methyltran 99.9 3.7E-27 1.3E-31 237.7 3.7 141 280-431 2-156 (343)
11 3swr_A DNA (cytosine-5)-methyl 99.9 2.1E-25 7.2E-30 250.3 16.1 132 122-256 146-286 (1002)
12 3av4_A DNA (cytosine-5)-methyl 99.9 2E-25 6.8E-30 255.9 13.9 131 122-255 457-597 (1330)
13 3me5_A Cytosine-specific methy 99.9 3E-26 1E-30 240.5 4.2 141 278-431 86-275 (482)
14 2qrv_A DNA (cytosine-5)-methyl 99.9 2.3E-25 7.8E-30 220.6 7.9 141 277-431 13-170 (295)
15 4dkj_A Cytosine-specific methy 99.9 1.6E-25 5.4E-30 230.4 -0.8 152 276-431 6-225 (403)
16 4dov_A ORC1, origin recognitio 99.8 1.4E-18 4.7E-23 156.1 16.7 127 124-254 23-163 (163)
17 2qrv_B DNA (cytosine-5)-methyl 99.6 3.5E-17 1.2E-21 155.7 0.4 91 278-405 31-137 (230)
18 2pv0_B DNA (cytosine-5)-methyl 99.5 9.6E-16 3.3E-20 155.3 1.1 121 278-431 187-317 (386)
19 2fl7_A Regulatory protein SIR3 98.9 3.2E-09 1.1E-13 100.6 10.7 121 130-252 48-191 (232)
20 1m4z_A Origin recognition comp 98.9 3.2E-09 1.1E-13 101.0 10.3 121 130-252 48-191 (238)
21 2fpo_A Methylase YHHF; structu 96.6 0.0016 5.4E-08 59.4 4.9 57 280-342 55-116 (202)
22 3k6r_A Putative transferase PH 96.6 0.00093 3.2E-08 65.1 3.2 56 280-342 126-188 (278)
23 2ift_A Putative methylase HI07 96.6 0.002 6.8E-08 58.7 5.1 57 280-342 54-117 (201)
24 3p9n_A Possible methyltransfer 96.6 0.0024 8.3E-08 57.0 5.5 59 279-343 44-107 (189)
25 1ne2_A Hypothetical protein TA 96.5 0.0026 8.9E-08 57.2 5.6 56 280-341 52-107 (200)
26 2igt_A SAM dependent methyltra 96.5 0.0018 6.1E-08 64.4 4.2 57 280-343 154-217 (332)
27 3c0k_A UPF0064 protein YCCW; P 96.5 0.0017 5.7E-08 65.7 4.1 58 280-343 221-285 (396)
28 1wy7_A Hypothetical protein PH 96.3 0.0038 1.3E-07 56.2 5.3 56 280-341 50-109 (207)
29 3gdh_A Trimethylguanosine synt 96.2 0.0039 1.3E-07 57.6 4.9 73 279-358 78-160 (241)
30 3bt7_A TRNA (uracil-5-)-methyl 96.2 0.0036 1.2E-07 62.8 4.9 56 281-343 215-275 (369)
31 3axs_A Probable N(2),N(2)-dime 96.0 0.0065 2.2E-07 62.0 5.8 60 280-343 53-119 (392)
32 1ws6_A Methyltransferase; stru 96.0 0.0071 2.4E-07 52.2 5.2 56 280-342 42-101 (171)
33 2b78_A Hypothetical protein SM 95.9 0.0048 1.6E-07 62.4 4.2 58 280-343 213-277 (385)
34 2esr_A Methyltransferase; stru 95.8 0.0086 2.9E-07 52.5 4.9 59 279-343 31-95 (177)
35 2frn_A Hypothetical protein PH 95.7 0.0067 2.3E-07 58.2 4.2 57 280-342 126-188 (278)
36 2fhp_A Methylase, putative; al 95.7 0.0084 2.9E-07 52.6 4.5 59 279-343 44-108 (187)
37 2as0_A Hypothetical protein PH 95.7 0.0079 2.7E-07 60.7 4.7 59 279-343 217-281 (396)
38 4dmg_A Putative uncharacterize 95.5 0.014 4.8E-07 59.4 5.9 58 280-344 215-276 (393)
39 3a27_A TYW2, uncharacterized p 95.5 0.011 3.7E-07 56.7 4.7 56 280-341 120-181 (272)
40 3ll7_A Putative methyltransfer 95.4 0.011 3.9E-07 60.5 4.7 56 280-342 94-156 (410)
41 3mti_A RRNA methylase; SAM-dep 95.4 0.02 6.9E-07 50.4 5.7 57 279-342 22-83 (185)
42 3h2b_A SAM-dependent methyltra 95.3 0.022 7.4E-07 50.9 5.9 56 280-342 42-97 (203)
43 2dul_A N(2),N(2)-dimethylguano 95.3 0.021 7.1E-07 57.8 6.2 58 280-343 48-126 (378)
44 3cgg_A SAM-dependent methyltra 95.3 0.025 8.7E-07 49.4 6.1 56 279-341 46-101 (195)
45 3ajd_A Putative methyltransfer 95.3 0.027 9.4E-07 53.7 6.7 76 279-359 83-173 (274)
46 2yx1_A Hypothetical protein MJ 95.2 0.011 3.7E-07 58.6 3.7 55 280-342 196-256 (336)
47 3v97_A Ribosomal RNA large sub 95.1 0.016 5.6E-07 63.2 5.3 59 280-344 540-605 (703)
48 3m6w_A RRNA methylase; rRNA me 95.1 0.036 1.2E-06 57.7 7.5 76 279-359 101-187 (464)
49 1wxx_A TT1595, hypothetical pr 95.1 0.016 5.6E-07 58.2 4.7 57 280-343 210-271 (382)
50 2b9e_A NOL1/NOP2/SUN domain fa 95.1 0.014 4.9E-07 57.3 4.1 76 279-359 102-191 (309)
51 1m6y_A S-adenosyl-methyltransf 95.0 0.034 1.2E-06 54.5 6.6 59 279-343 26-89 (301)
52 2r6z_A UPF0341 protein in RSP 94.9 0.025 8.6E-07 54.0 5.3 57 280-343 84-153 (258)
53 1qam_A ERMC' methyltransferase 94.8 0.021 7.3E-07 53.8 4.4 57 279-342 30-89 (244)
54 3m4x_A NOL1/NOP2/SUN family pr 94.8 0.041 1.4E-06 57.1 6.8 76 279-359 105-192 (456)
55 2frx_A Hypothetical protein YE 94.7 0.041 1.4E-06 57.4 6.5 75 279-359 117-204 (479)
56 3pfg_A N-methyltransferase; N, 94.7 0.042 1.4E-06 51.3 6.0 56 280-342 51-106 (263)
57 3m33_A Uncharacterized protein 94.6 0.049 1.7E-06 49.9 6.3 54 279-339 48-101 (226)
58 3lpm_A Putative methyltransfer 94.5 0.029 9.8E-07 52.8 4.6 59 279-343 49-113 (259)
59 2vdv_E TRNA (guanine-N(7)-)-me 94.4 0.025 8.7E-07 52.7 3.8 59 279-342 49-120 (246)
60 3q87_B N6 adenine specific DNA 94.4 0.054 1.8E-06 47.7 5.7 49 280-340 24-72 (170)
61 2jjq_A Uncharacterized RNA met 94.3 0.018 6.2E-07 59.1 2.9 56 280-342 291-350 (425)
62 3njr_A Precorrin-6Y methylase; 94.3 0.045 1.5E-06 49.8 5.2 57 279-342 55-117 (204)
63 2yxd_A Probable cobalt-precorr 94.2 0.057 1.9E-06 46.7 5.4 55 279-340 35-94 (183)
64 3eey_A Putative rRNA methylase 94.2 0.051 1.7E-06 48.3 5.2 59 279-343 22-88 (197)
65 3tqs_A Ribosomal RNA small sub 94.1 0.034 1.1E-06 53.2 4.1 56 280-342 30-88 (255)
66 2oyr_A UPF0341 protein YHIQ; a 94.0 0.02 6.8E-07 55.1 2.3 56 281-343 90-159 (258)
67 2ozv_A Hypothetical protein AT 94.0 0.048 1.6E-06 51.6 4.8 59 279-342 36-103 (260)
68 1ixk_A Methyltransferase; open 93.9 0.044 1.5E-06 53.6 4.5 75 279-359 118-204 (315)
69 1uwv_A 23S rRNA (uracil-5-)-me 93.8 0.041 1.4E-06 56.3 4.3 55 280-341 287-346 (433)
70 3hnr_A Probable methyltransfer 93.8 0.069 2.4E-06 48.1 5.4 56 279-341 45-101 (220)
71 3m70_A Tellurite resistance pr 93.6 0.052 1.8E-06 51.4 4.2 57 279-342 120-180 (286)
72 3fut_A Dimethyladenosine trans 93.5 0.079 2.7E-06 51.1 5.5 56 279-342 47-104 (271)
73 3tm4_A TRNA (guanine N2-)-meth 93.3 0.074 2.5E-06 53.2 5.1 59 279-342 217-281 (373)
74 3e05_A Precorrin-6Y C5,15-meth 93.3 0.067 2.3E-06 47.9 4.4 57 279-341 40-102 (204)
75 3e8s_A Putative SAM dependent 93.3 0.17 5.8E-06 45.2 7.1 55 280-342 53-107 (227)
76 2h1r_A Dimethyladenosine trans 93.2 0.047 1.6E-06 53.1 3.4 55 280-341 43-102 (299)
77 1ve3_A Hypothetical protein PH 93.2 0.077 2.6E-06 47.8 4.6 55 280-341 39-97 (227)
78 3dxy_A TRNA (guanine-N(7)-)-me 93.2 0.14 4.8E-06 47.2 6.4 60 279-343 34-98 (218)
79 1yzh_A TRNA (guanine-N(7)-)-me 93.1 0.084 2.9E-06 47.8 4.8 58 280-342 42-104 (214)
80 2fca_A TRNA (guanine-N(7)-)-me 93.1 0.13 4.3E-06 47.0 6.0 59 280-343 39-102 (213)
81 3bxo_A N,N-dimethyltransferase 93.1 0.081 2.8E-06 48.1 4.7 56 279-341 40-95 (239)
82 2pxx_A Uncharacterized protein 93.1 0.1 3.4E-06 46.4 5.2 57 279-341 42-101 (215)
83 3ggd_A SAM-dependent methyltra 93.0 0.097 3.3E-06 48.1 5.2 57 279-342 56-114 (245)
84 3ftd_A Dimethyladenosine trans 93.0 0.071 2.4E-06 50.6 4.3 55 280-342 32-89 (249)
85 3tma_A Methyltransferase; thum 93.0 0.058 2E-06 53.3 3.8 59 279-343 203-268 (354)
86 3ofk_A Nodulation protein S; N 92.9 0.079 2.7E-06 47.7 4.2 57 279-342 51-110 (216)
87 2zig_A TTHA0409, putative modi 92.8 0.088 3E-06 50.9 4.7 42 280-328 236-277 (297)
88 3lcc_A Putative methyl chlorid 92.8 0.072 2.5E-06 48.7 3.8 54 281-341 68-127 (235)
89 1xdz_A Methyltransferase GIDB; 92.7 0.12 4.2E-06 47.7 5.4 58 280-342 71-133 (240)
90 4dzr_A Protein-(glutamine-N5) 92.7 0.038 1.3E-06 49.2 1.8 59 279-342 30-92 (215)
91 3dmg_A Probable ribosomal RNA 92.7 0.079 2.7E-06 53.5 4.3 57 279-342 233-293 (381)
92 3gru_A Dimethyladenosine trans 92.7 0.066 2.2E-06 52.4 3.6 56 280-342 51-109 (295)
93 3e23_A Uncharacterized protein 92.7 0.13 4.6E-06 46.0 5.4 55 280-342 44-98 (211)
94 1iy9_A Spermidine synthase; ro 92.6 0.17 5.7E-06 48.5 6.3 59 280-343 76-143 (275)
95 2gb4_A Thiopurine S-methyltran 92.6 0.13 4.5E-06 48.7 5.5 57 279-342 68-146 (252)
96 3l8d_A Methyltransferase; stru 92.6 0.12 4E-06 47.2 4.9 56 279-341 53-110 (242)
97 2oo3_A Protein involved in cat 92.5 0.082 2.8E-06 51.6 3.9 57 280-343 92-151 (283)
98 1zx0_A Guanidinoacetate N-meth 92.4 0.14 4.8E-06 47.0 5.3 58 279-342 60-121 (236)
99 1pjz_A Thiopurine S-methyltran 92.4 0.11 3.7E-06 47.0 4.5 57 279-342 22-95 (203)
100 1wzn_A SAM-dependent methyltra 92.3 0.13 4.4E-06 47.4 4.9 55 280-341 42-100 (252)
101 2p7i_A Hypothetical protein; p 92.3 0.18 6E-06 45.7 5.8 55 280-341 43-98 (250)
102 3grz_A L11 mtase, ribosomal pr 92.3 0.12 4.3E-06 46.1 4.6 57 279-341 60-121 (205)
103 2yxl_A PH0851 protein, 450AA l 92.2 0.15 5.1E-06 52.4 5.7 76 279-359 259-347 (450)
104 1dus_A MJ0882; hypothetical pr 92.2 0.22 7.5E-06 43.2 6.0 56 279-341 52-114 (194)
105 3tr6_A O-methyltransferase; ce 92.1 0.2 7E-06 45.3 6.0 59 280-343 65-130 (225)
106 4fzv_A Putative methyltransfer 92.1 0.18 6E-06 50.7 6.0 72 279-355 148-236 (359)
107 2p35_A Trans-aconitate 2-methy 92.1 0.15 5E-06 47.0 5.1 58 279-341 33-90 (259)
108 1inl_A Spermidine synthase; be 92.1 0.17 5.6E-06 49.1 5.6 58 280-342 91-157 (296)
109 1sqg_A SUN protein, FMU protei 92.0 0.18 6.2E-06 51.3 6.0 76 279-359 246-332 (429)
110 3tfw_A Putative O-methyltransf 92.0 0.22 7.4E-06 46.6 6.1 61 279-344 63-130 (248)
111 3g5l_A Putative S-adenosylmeth 92.0 0.22 7.6E-06 45.9 6.1 57 279-341 44-102 (253)
112 1l3i_A Precorrin-6Y methyltran 91.9 0.21 7.2E-06 43.2 5.6 56 279-341 33-94 (192)
113 2b3t_A Protein methyltransfera 91.8 0.17 5.8E-06 47.9 5.2 58 279-341 109-171 (276)
114 3dtn_A Putative methyltransfer 91.8 0.16 5.4E-06 46.2 4.8 59 279-342 44-105 (234)
115 3ou2_A SAM-dependent methyltra 91.8 0.14 4.9E-06 45.6 4.5 55 280-341 47-102 (218)
116 3sm3_A SAM-dependent methyltra 91.7 0.19 6.6E-06 45.2 5.3 56 279-341 30-95 (235)
117 3lbf_A Protein-L-isoaspartate 91.7 0.22 7.7E-06 44.5 5.6 56 279-341 77-137 (210)
118 3dou_A Ribosomal RNA large sub 91.6 0.16 5.6E-06 45.8 4.6 49 279-340 25-73 (191)
119 4htf_A S-adenosylmethionine-de 91.5 0.16 5.6E-06 47.9 4.8 56 280-342 69-130 (285)
120 3iv6_A Putative Zn-dependent a 91.5 0.15 5.3E-06 48.8 4.6 54 279-340 45-98 (261)
121 2xvm_A Tellurite resistance pr 91.5 0.16 5.4E-06 44.6 4.3 55 280-341 33-92 (199)
122 1mjf_A Spermidine synthase; sp 91.4 0.28 9.5E-06 47.0 6.3 58 280-343 76-148 (281)
123 1vbf_A 231AA long hypothetical 91.4 0.19 6.4E-06 45.7 4.9 55 279-340 70-127 (231)
124 3g89_A Ribosomal RNA small sub 91.4 0.27 9.2E-06 46.3 6.0 59 279-342 80-143 (249)
125 2yqz_A Hypothetical protein TT 91.3 0.2 6.8E-06 46.1 5.0 56 279-341 39-98 (263)
126 3bkw_A MLL3908 protein, S-aden 91.3 0.3 1E-05 44.3 6.2 56 279-341 43-101 (243)
127 1nv8_A HEMK protein; class I a 91.3 0.1 3.5E-06 50.2 3.1 56 280-341 124-185 (284)
128 1y8c_A S-adenosylmethionine-de 91.3 0.16 5.4E-06 46.2 4.2 56 279-341 37-96 (246)
129 3ccf_A Cyclopropane-fatty-acyl 91.3 0.28 9.5E-06 46.2 6.1 56 279-341 57-112 (279)
130 3duw_A OMT, O-methyltransferas 91.2 0.29 9.9E-06 44.3 5.9 60 279-343 58-124 (223)
131 3mq2_A 16S rRNA methyltransfer 91.2 0.13 4.3E-06 46.5 3.4 58 279-341 27-93 (218)
132 3evz_A Methyltransferase; NYSG 91.1 0.18 6.2E-06 45.8 4.5 58 279-342 55-117 (230)
133 2kw5_A SLR1183 protein; struct 91.1 0.13 4.4E-06 45.7 3.3 53 282-341 32-88 (202)
134 2nxc_A L11 mtase, ribosomal pr 91.0 0.18 6.1E-06 47.4 4.5 56 279-341 120-179 (254)
135 3ujc_A Phosphoethanolamine N-m 91.0 0.22 7.6E-06 45.8 5.0 57 279-341 55-114 (266)
136 3u81_A Catechol O-methyltransf 91.0 0.24 8.3E-06 45.0 5.2 61 280-344 59-125 (221)
137 3i9f_A Putative type 11 methyl 90.9 0.2 7E-06 43.1 4.4 52 279-337 17-68 (170)
138 3g5t_A Trans-aconitate 3-methy 90.9 0.26 8.9E-06 46.9 5.5 59 279-342 36-102 (299)
139 1fbn_A MJ fibrillarin homologu 90.9 0.27 9.4E-06 45.0 5.5 56 279-340 74-133 (230)
140 1g8a_A Fibrillarin-like PRE-rR 90.9 0.16 5.5E-06 46.2 3.8 56 280-341 74-134 (227)
141 1zq9_A Probable dimethyladenos 90.7 0.13 4.4E-06 49.5 3.2 56 279-341 28-89 (285)
142 3ntv_A MW1564 protein; rossman 90.7 0.28 9.7E-06 45.1 5.4 59 280-343 72-136 (232)
143 2qfm_A Spermine synthase; sper 90.7 0.36 1.2E-05 48.7 6.5 59 279-343 188-259 (364)
144 2gs9_A Hypothetical protein TT 90.7 0.25 8.6E-06 44.1 4.9 53 279-341 36-89 (211)
145 3jwg_A HEN1, methyltransferase 90.6 0.26 8.9E-06 44.3 5.0 56 279-339 29-94 (219)
146 3uzu_A Ribosomal RNA small sub 90.6 0.12 4.3E-06 49.9 3.0 59 279-342 42-103 (279)
147 1g60_A Adenine-specific methyl 90.5 0.22 7.5E-06 47.1 4.6 43 280-329 213-255 (260)
148 3bzb_A Uncharacterized protein 90.5 0.28 9.7E-06 46.7 5.4 43 280-328 80-123 (281)
149 3jwh_A HEN1; methyltransferase 90.5 0.25 8.5E-06 44.5 4.8 56 279-339 29-94 (217)
150 1o9g_A RRNA methyltransferase; 90.5 0.16 5.5E-06 47.2 3.5 47 279-328 51-97 (250)
151 2avd_A Catechol-O-methyltransf 90.3 0.36 1.2E-05 43.7 5.7 59 280-343 70-135 (229)
152 3mb5_A SAM-dependent methyltra 90.3 0.25 8.5E-06 45.7 4.6 57 279-341 93-157 (255)
153 1yb2_A Hypothetical protein TA 90.2 0.22 7.4E-06 47.2 4.2 56 279-340 110-173 (275)
154 1jsx_A Glucose-inhibited divis 90.2 0.26 9E-06 43.8 4.6 57 280-341 66-127 (207)
155 1o54_A SAM-dependent O-methylt 90.1 0.18 6.1E-06 47.6 3.6 56 280-341 113-176 (277)
156 2h00_A Methyltransferase 10 do 90.0 0.24 8.3E-06 45.9 4.4 56 280-340 66-127 (254)
157 3bwc_A Spermidine synthase; SA 90.0 0.46 1.6E-05 46.0 6.5 59 280-343 96-163 (304)
158 2ex4_A Adrenal gland protein A 90.0 0.32 1.1E-05 44.6 5.1 57 279-341 79-140 (241)
159 2avn_A Ubiquinone/menaquinone 89.9 0.41 1.4E-05 44.5 5.9 55 279-341 54-108 (260)
160 3c3p_A Methyltransferase; NP_9 89.9 0.39 1.3E-05 43.1 5.5 59 280-343 57-122 (210)
161 1xxl_A YCGJ protein; structura 89.9 0.28 9.7E-06 45.0 4.7 56 279-341 21-81 (239)
162 2pt6_A Spermidine synthase; tr 89.8 0.47 1.6E-05 46.5 6.5 58 280-343 117-184 (321)
163 3g2m_A PCZA361.24; SAM-depende 89.8 0.16 5.4E-06 48.5 2.9 53 282-341 85-145 (299)
164 3dlc_A Putative S-adenosyl-L-m 89.8 0.24 8.2E-06 43.9 4.0 54 282-341 46-105 (219)
165 2ipx_A RRNA 2'-O-methyltransfe 89.7 0.28 9.5E-06 44.9 4.4 55 280-341 78-138 (233)
166 2pwy_A TRNA (adenine-N(1)-)-me 89.7 0.29 1E-05 45.0 4.6 57 279-341 96-160 (258)
167 3kkz_A Uncharacterized protein 89.7 0.3 1E-05 45.5 4.7 57 279-341 46-108 (267)
168 3dr5_A Putative O-methyltransf 89.7 0.24 8.3E-06 45.7 4.0 60 280-343 57-123 (221)
169 3dli_A Methyltransferase; PSI- 89.7 0.4 1.4E-05 43.9 5.5 54 279-342 41-94 (240)
170 3adn_A Spermidine synthase; am 89.6 0.27 9.1E-06 47.8 4.4 58 280-342 84-151 (294)
171 3thr_A Glycine N-methyltransfe 89.5 0.42 1.4E-05 45.0 5.6 57 279-342 57-122 (293)
172 3uwp_A Histone-lysine N-methyl 89.5 0.37 1.3E-05 49.6 5.5 59 279-342 173-245 (438)
173 1xtp_A LMAJ004091AAA; SGPP, st 89.4 0.24 8.2E-06 45.4 3.7 57 279-341 93-152 (254)
174 4gek_A TRNA (CMO5U34)-methyltr 89.4 0.46 1.6E-05 45.1 5.8 60 279-341 70-135 (261)
175 3k0b_A Predicted N6-adenine-sp 89.2 0.28 9.7E-06 49.6 4.4 61 279-342 201-303 (393)
176 3vc1_A Geranyl diphosphate 2-C 89.1 0.27 9.3E-06 47.2 4.0 57 279-341 117-179 (312)
177 2o07_A Spermidine synthase; st 89.0 0.57 1.9E-05 45.6 6.2 59 280-343 96-163 (304)
178 1yub_A Ermam, rRNA methyltrans 89.0 0.03 1E-06 52.4 -2.8 57 279-342 29-88 (245)
179 4dcm_A Ribosomal RNA large sub 88.7 0.37 1.3E-05 48.4 4.8 55 280-340 223-286 (375)
180 1p91_A Ribosomal RNA large sub 88.4 0.51 1.8E-05 43.9 5.4 57 279-341 85-142 (269)
181 3d2l_A SAM-dependent methyltra 88.4 0.52 1.8E-05 42.7 5.3 53 281-341 35-91 (243)
182 3dh0_A SAM dependent methyltra 88.4 0.23 7.8E-06 44.5 2.8 57 279-341 37-100 (219)
183 1nkv_A Hypothetical protein YJ 88.3 0.42 1.4E-05 43.9 4.6 57 279-341 36-98 (256)
184 3f4k_A Putative methyltransfer 88.3 0.26 9E-06 45.3 3.2 57 279-341 46-108 (257)
185 3ocj_A Putative exported prote 88.3 0.32 1.1E-05 46.6 3.9 59 279-341 118-182 (305)
186 2yvl_A TRMI protein, hypotheti 88.2 0.38 1.3E-05 44.0 4.2 54 280-340 92-151 (248)
187 3hm2_A Precorrin-6Y C5,15-meth 88.0 0.5 1.7E-05 40.6 4.7 55 279-340 25-86 (178)
188 2pbf_A Protein-L-isoaspartate 88.0 0.78 2.7E-05 41.5 6.2 56 279-340 80-151 (227)
189 1ri5_A MRNA capping enzyme; me 88.0 0.31 1.1E-05 45.7 3.5 57 279-341 64-126 (298)
190 3ldu_A Putative methylase; str 87.9 0.27 9.3E-06 49.6 3.2 61 279-342 195-297 (385)
191 1i9g_A Hypothetical protein RV 87.9 0.58 2E-05 43.8 5.4 57 279-341 99-165 (280)
192 3r0q_C Probable protein argini 87.8 0.43 1.5E-05 47.7 4.6 57 279-342 63-125 (376)
193 2fyt_A Protein arginine N-meth 87.6 0.41 1.4E-05 47.1 4.3 55 280-341 65-125 (340)
194 4azs_A Methyltransferase WBDD; 87.5 0.52 1.8E-05 49.8 5.3 58 279-343 66-128 (569)
195 3hem_A Cyclopropane-fatty-acyl 87.5 0.3 1E-05 46.6 3.1 57 279-341 72-134 (302)
196 2gpy_A O-methyltransferase; st 87.4 0.51 1.7E-05 43.0 4.5 58 280-342 55-118 (233)
197 1xj5_A Spermidine synthase 1; 87.3 0.93 3.2E-05 44.8 6.7 58 280-343 121-188 (334)
198 2i7c_A Spermidine synthase; tr 87.0 0.97 3.3E-05 43.2 6.5 59 280-343 79-146 (283)
199 2f8l_A Hypothetical protein LM 86.9 0.26 8.9E-06 48.4 2.4 60 279-339 130-194 (344)
200 1i1n_A Protein-L-isoaspartate 86.9 0.71 2.4E-05 41.7 5.2 56 279-340 77-144 (226)
201 1uir_A Polyamine aminopropyltr 86.7 1.1 3.7E-05 43.6 6.7 58 280-343 78-146 (314)
202 1vl5_A Unknown conserved prote 86.7 0.57 2E-05 43.3 4.5 56 279-341 37-97 (260)
203 3mgg_A Methyltransferase; NYSG 86.5 0.59 2E-05 43.5 4.6 58 279-341 37-99 (276)
204 1kpg_A CFA synthase;, cyclopro 86.3 0.78 2.7E-05 43.0 5.3 57 279-341 64-126 (287)
205 3q7e_A Protein arginine N-meth 86.2 0.71 2.4E-05 45.5 5.1 55 280-341 67-127 (349)
206 3cc8_A Putative methyltransfer 86.1 1.1 3.9E-05 39.8 6.1 54 279-341 32-85 (230)
207 3kr9_A SAM-dependent methyltra 85.9 0.81 2.8E-05 42.9 5.1 54 280-338 16-75 (225)
208 1sui_A Caffeoyl-COA O-methyltr 85.8 0.67 2.3E-05 43.4 4.5 59 280-343 80-145 (247)
209 3gjy_A Spermidine synthase; AP 85.8 1 3.6E-05 44.3 6.1 59 280-343 90-153 (317)
210 2p8j_A S-adenosylmethionine-de 85.5 0.83 2.8E-05 40.4 4.8 56 280-341 24-83 (209)
211 1qyr_A KSGA, high level kasuga 85.5 0.56 1.9E-05 44.5 3.8 55 280-341 22-79 (252)
212 3ckk_A TRNA (guanine-N(7)-)-me 85.2 1.1 3.9E-05 41.5 5.8 58 279-341 46-114 (235)
213 2fk8_A Methoxy mycolic acid sy 85.2 0.72 2.5E-05 44.1 4.5 57 279-341 90-152 (318)
214 2b2c_A Spermidine synthase; be 85.1 1.1 3.9E-05 43.7 6.0 58 280-343 109-176 (314)
215 2b25_A Hypothetical protein; s 84.8 0.51 1.7E-05 45.9 3.2 59 279-341 105-179 (336)
216 2hnk_A SAM-dependent O-methylt 84.7 0.83 2.9E-05 41.9 4.5 58 280-343 61-126 (239)
217 3gnl_A Uncharacterized protein 84.7 0.98 3.3E-05 42.9 5.1 56 280-340 22-83 (244)
218 3r3h_A O-methyltransferase, SA 84.6 0.35 1.2E-05 45.2 1.9 60 280-343 61-126 (242)
219 2ih2_A Modification methylase 84.5 0.32 1.1E-05 48.5 1.7 52 280-341 40-93 (421)
220 3gu3_A Methyltransferase; alph 84.5 0.66 2.3E-05 43.8 3.9 57 279-341 22-84 (284)
221 3cbg_A O-methyltransferase; cy 84.4 1.1 3.9E-05 41.0 5.3 60 280-343 73-138 (232)
222 3bgv_A MRNA CAP guanine-N7 met 84.3 0.49 1.7E-05 45.3 2.9 57 279-341 34-102 (313)
223 3fzg_A 16S rRNA methylase; met 84.3 1.1 3.7E-05 41.5 5.0 44 280-328 50-93 (200)
224 2qm3_A Predicted methyltransfe 84.2 0.39 1.3E-05 47.8 2.2 55 280-340 173-232 (373)
225 1dl5_A Protein-L-isoaspartate 84.1 0.83 2.8E-05 44.2 4.4 59 279-341 75-138 (317)
226 2o57_A Putative sarcosine dime 84.1 0.75 2.6E-05 43.4 4.0 57 279-341 82-144 (297)
227 3ldg_A Putative uncharacterize 83.9 0.57 1.9E-05 47.3 3.2 61 279-342 194-296 (384)
228 3lec_A NADB-rossmann superfami 83.9 1.1 3.8E-05 42.1 5.1 56 280-340 22-83 (230)
229 2y1w_A Histone-arginine methyl 83.7 1.1 3.6E-05 44.2 5.1 56 279-341 50-111 (348)
230 1g6q_1 HnRNP arginine N-methyl 83.7 0.82 2.8E-05 44.6 4.2 55 280-341 39-99 (328)
231 1r18_A Protein-L-isoaspartate( 83.6 0.76 2.6E-05 41.8 3.7 56 279-340 84-156 (227)
232 3ege_A Putative methyltransfer 83.4 0.54 1.8E-05 43.8 2.7 55 279-341 34-88 (261)
233 4df3_A Fibrillarin-like rRNA/T 83.1 1.1 3.8E-05 42.2 4.7 61 278-342 76-139 (233)
234 4fsd_A Arsenic methyltransfera 82.7 1.2 4.1E-05 44.3 5.0 58 279-342 83-155 (383)
235 3id6_C Fibrillarin-like rRNA/T 82.7 1.2 4.1E-05 41.8 4.8 59 279-341 76-137 (232)
236 3c3y_A Pfomt, O-methyltransfer 82.6 1.2 4.1E-05 41.1 4.7 59 280-343 71-136 (237)
237 1u2z_A Histone-lysine N-methyl 82.4 1.3 4.5E-05 45.5 5.3 41 279-324 242-282 (433)
238 2plw_A Ribosomal RNA methyltra 82.3 0.97 3.3E-05 39.8 3.8 51 279-341 22-75 (201)
239 1wg8_A Predicted S-adenosylmet 82.1 2 6.8E-05 41.8 6.2 57 280-344 23-81 (285)
240 4hg2_A Methyltransferase type 82.1 0.58 2E-05 44.4 2.3 53 281-341 41-93 (257)
241 2nyu_A Putative ribosomal RNA 82.0 1.2 4.1E-05 38.9 4.3 50 280-341 23-83 (196)
242 3bus_A REBM, methyltransferase 81.8 1.6 5.6E-05 40.3 5.4 57 279-341 61-123 (273)
243 1boo_A Protein (N-4 cytosine-s 81.7 0.94 3.2E-05 44.3 3.8 45 280-331 253-297 (323)
244 1nt2_A Fibrillarin-like PRE-rR 81.7 1.4 4.7E-05 40.1 4.7 57 279-341 57-117 (210)
245 3htx_A HEN1; HEN1, small RNA m 81.4 1.3 4.5E-05 49.4 5.1 57 279-342 721-791 (950)
246 2yxe_A Protein-L-isoaspartate 81.1 1.3 4.4E-05 39.5 4.2 55 279-339 77-138 (215)
247 1jg1_A PIMT;, protein-L-isoasp 80.9 1.1 3.8E-05 40.9 3.7 54 279-338 91-149 (235)
248 4hc4_A Protein arginine N-meth 80.9 1.5 5E-05 44.2 4.9 54 282-341 86-144 (376)
249 3opn_A Putative hemolysin; str 80.4 1 3.5E-05 41.9 3.3 46 279-330 37-82 (232)
250 3p2e_A 16S rRNA methylase; met 80.1 1.2 4.2E-05 40.9 3.8 58 279-341 24-90 (225)
251 2i62_A Nicotinamide N-methyltr 80.0 1 3.4E-05 41.3 3.1 46 279-330 56-101 (265)
252 3b3j_A Histone-arginine methyl 79.2 1.2 4.1E-05 46.2 3.7 55 280-341 159-219 (480)
253 3fpf_A Mtnas, putative unchara 79.0 2.1 7.2E-05 41.8 5.2 59 279-342 122-185 (298)
254 3orh_A Guanidinoacetate N-meth 78.5 2.9 0.0001 38.4 5.8 59 279-343 60-122 (236)
255 2okc_A Type I restriction enzy 78.4 1.2 4E-05 45.5 3.3 58 279-339 171-246 (445)
256 1vlm_A SAM-dependent methyltra 78.0 1.9 6.5E-05 38.7 4.3 49 280-341 48-96 (219)
257 1ej0_A FTSJ; methyltransferase 77.7 0.89 3E-05 38.3 1.9 52 279-342 22-75 (180)
258 2bm8_A Cephalosporin hydroxyla 77.3 0.58 2E-05 43.4 0.6 59 280-341 82-142 (236)
259 2pjd_A Ribosomal RNA small sub 77.1 1.4 4.9E-05 43.0 3.4 55 280-341 197-257 (343)
260 1ap0_A Modifier protein 1; chr 77.0 2 6.9E-05 33.1 3.5 42 386-433 6-49 (73)
261 3g07_A 7SK snRNA methylphospha 75.7 2.6 8.9E-05 40.1 4.7 46 280-330 47-92 (292)
262 4hae_A CDY-like 2, chromodomai 74.6 1.1 3.8E-05 35.4 1.5 41 387-432 17-59 (81)
263 3lkd_A Type I restriction-modi 73.3 2.9 9.8E-05 44.1 4.7 47 279-327 221-267 (542)
264 2cmg_A Spermidine synthase; tr 73.2 1.7 5.8E-05 41.3 2.7 54 281-341 74-136 (262)
265 3s1s_A Restriction endonucleas 72.1 2.9 9.9E-05 46.4 4.5 46 279-327 321-369 (878)
266 2vdw_A Vaccinia virus capping 71.3 3.6 0.00012 39.7 4.5 43 280-328 49-91 (302)
267 2ar0_A M.ecoki, type I restric 71.1 4.1 0.00014 42.8 5.3 61 279-339 169-252 (541)
268 3lcv_B Sisomicin-gentamicin re 70.8 2.2 7.5E-05 41.4 2.8 44 280-328 133-176 (281)
269 1pdq_A Polycomb protein; methy 69.4 1.1 3.6E-05 34.8 0.2 40 388-433 15-56 (72)
270 3v97_A Ribosomal RNA large sub 69.0 2.9 9.9E-05 45.5 3.6 62 279-341 190-295 (703)
271 3fwz_A Inner membrane protein 67.1 7.2 0.00025 32.6 5.1 51 286-341 11-61 (140)
272 3g7l_A Chromo domain-containin 66.8 2.2 7.5E-05 31.7 1.5 37 390-432 4-43 (61)
273 2oxt_A Nucleoside-2'-O-methylt 66.2 0.84 2.9E-05 43.5 -1.1 33 279-319 74-106 (265)
274 1eg2_A Modification methylase 66.0 4.3 0.00015 39.7 3.9 44 280-330 243-289 (319)
275 2wa2_A Non-structural protein 65.2 1.1 3.9E-05 42.9 -0.4 33 279-319 82-114 (276)
276 2rsn_A Chromo domain-containin 63.8 2.9 9.8E-05 32.4 1.7 37 390-432 18-57 (75)
277 3i91_A Chromobox protein homol 63.6 1.6 5.6E-05 31.4 0.3 34 393-432 3-38 (54)
278 1i4w_A Mitochondrial replicati 63.5 11 0.00037 37.6 6.3 58 280-342 59-118 (353)
279 1q3l_A Heterochromatin protein 62.5 1.4 4.9E-05 33.7 -0.3 39 389-433 12-52 (69)
280 2a14_A Indolethylamine N-methy 62.3 5.1 0.00018 37.2 3.5 43 279-327 55-97 (263)
281 3llv_A Exopolyphosphatase-rela 62.2 9.8 0.00033 31.4 5.0 52 286-342 10-61 (141)
282 3frh_A 16S rRNA methylase; met 62.0 7.7 0.00026 37.0 4.7 42 279-328 105-146 (253)
283 2epb_A Chromodomain-helicase-D 61.6 1.3 4.6E-05 33.7 -0.5 47 386-432 4-52 (68)
284 3hp7_A Hemolysin, putative; st 61.5 5.2 0.00018 38.8 3.5 47 279-331 85-131 (291)
285 3h91_A Chromobox protein homol 59.9 2.1 7.2E-05 30.9 0.3 35 392-432 2-38 (54)
286 1pfb_A Polycomb protein; chrom 59.7 2 6.7E-05 31.1 0.1 35 393-433 3-39 (55)
287 3khk_A Type I restriction-modi 57.9 5.2 0.00018 42.1 3.0 46 282-328 247-303 (544)
288 3ua3_A Protein arginine N-meth 56.8 12 0.00043 40.8 5.7 61 280-342 410-485 (745)
289 3bkx_A SAM-dependent methyltra 54.6 5.2 0.00018 36.9 2.1 53 279-337 43-109 (275)
290 2rso_A Chromatin-associated pr 54.5 4.1 0.00014 32.8 1.2 42 387-432 24-68 (92)
291 3fdt_A Chromobox protein homol 54.2 4.2 0.00014 29.8 1.1 35 392-432 2-38 (59)
292 1lss_A TRK system potassium up 53.8 18 0.00062 29.1 5.2 51 287-341 9-59 (140)
293 2a7y_A Hypothetical protein RV 52.8 8.8 0.0003 30.4 2.8 38 136-174 7-45 (83)
294 4hcz_A PHD finger protein 1; p 51.5 19 0.00065 26.6 4.2 28 134-162 3-30 (58)
295 2k1b_A Chromobox protein homol 51.4 1.2 4.3E-05 34.4 -2.3 37 391-433 19-57 (73)
296 3tka_A Ribosomal RNA small sub 51.0 25 0.00084 35.0 6.4 61 279-344 57-119 (347)
297 1qzz_A RDMB, aclacinomycin-10- 50.3 17 0.00058 35.2 5.1 56 279-340 182-243 (374)
298 4gqb_A Protein arginine N-meth 49.1 11 0.00039 40.5 3.9 62 280-342 358-424 (637)
299 2dpm_A M.dpnii 1, protein (ade 48.8 15 0.0005 35.3 4.3 37 281-326 37-73 (284)
300 3ic5_A Putative saccharopine d 48.7 24 0.00082 27.4 5.0 48 288-340 11-59 (118)
301 1tw3_A COMT, carminomycin 4-O- 48.2 11 0.00038 36.3 3.4 56 279-340 183-244 (360)
302 2kvm_A Chromobox protein homol 48.0 3.6 0.00012 31.6 -0.2 38 390-433 10-49 (74)
303 2r3s_A Uncharacterized protein 47.7 12 0.0004 35.6 3.5 56 279-340 165-226 (335)
304 1x19_A CRTF-related protein; m 47.5 26 0.00088 33.9 5.9 56 280-341 191-252 (359)
305 3c85_A Putative glutathione-re 47.2 19 0.00067 31.1 4.6 51 286-341 43-94 (183)
306 2qe6_A Uncharacterized protein 47.0 17 0.00057 34.2 4.4 56 281-341 79-140 (274)
307 3lwe_A M-phase phosphoprotein 46.4 2.4 8.3E-05 31.5 -1.3 34 393-432 4-39 (62)
308 2dnv_A Chromobox protein homol 46.3 3.1 0.00011 31.1 -0.7 37 391-433 8-46 (64)
309 2m0o_A PHD finger protein 1; t 46.1 11 0.00037 29.4 2.3 29 133-162 25-53 (79)
310 2eqj_A Metal-response element- 45.8 25 0.00085 26.6 4.2 29 133-162 12-40 (66)
311 4e2x_A TCAB9; kijanose, tetron 45.5 18 0.0006 35.8 4.5 43 279-328 107-149 (416)
312 3l4b_C TRKA K+ channel protien 43.7 26 0.00089 31.3 4.9 52 286-341 4-55 (218)
313 2k4m_A TR8_protein, UPF0146 pr 43.6 13 0.00043 32.8 2.7 36 280-322 36-73 (153)
314 2zfu_A Nucleomethylin, cerebra 42.9 15 0.00053 32.3 3.2 43 279-341 67-109 (215)
315 1g6z_A CLR4 protein; transfera 42.9 2.7 9.3E-05 31.9 -1.6 37 392-433 7-46 (70)
316 2g72_A Phenylethanolamine N-me 42.3 20 0.00068 33.3 4.1 44 279-328 71-114 (289)
317 2xyq_A Putative 2'-O-methyl tr 42.1 19 0.00065 34.7 3.9 47 279-341 63-118 (290)
318 1af7_A Chemotaxis receptor met 41.5 20 0.00069 34.0 4.0 47 279-328 105-157 (274)
319 2ip2_A Probable phenazine-spec 40.9 24 0.00083 33.5 4.5 54 281-340 169-228 (334)
320 3llr_A DNA (cytosine-5)-methyl 40.5 13 0.00044 32.8 2.2 45 130-175 12-59 (154)
321 3sso_A Methyltransferase; macr 40.5 14 0.00049 37.7 2.9 55 279-341 216-276 (419)
322 2g1p_A DNA adenine methylase; 40.1 28 0.00095 33.2 4.7 38 281-327 29-66 (278)
323 2d9u_A Chromobox protein homol 38.5 7.6 0.00026 29.8 0.4 36 391-432 8-45 (74)
324 2xk0_A Polycomb protein PCL; t 37.5 29 0.001 26.4 3.4 26 133-159 14-39 (69)
325 2l8d_A Lamin-B receptor; DNA b 36.1 29 0.00098 26.2 3.2 28 133-160 8-35 (66)
326 1yf3_A DNA adenine methylase; 35.2 22 0.00074 33.5 3.1 40 281-330 26-65 (259)
327 3ged_A Short-chain dehydrogena 35.0 42 0.0014 31.3 5.0 50 288-340 9-58 (247)
328 1ri0_A Hepatoma-derived growth 35.0 16 0.00053 30.2 1.8 43 131-174 16-60 (110)
329 2gfu_A DNA mismatch repair pro 34.1 19 0.00064 30.6 2.2 45 130-175 18-68 (134)
330 2dig_A Lamin-B receptor; tudor 33.5 35 0.0012 25.9 3.2 28 133-160 11-38 (68)
331 1khc_A DNA cytosine-5 methyltr 33.3 19 0.00064 31.4 2.1 44 131-175 8-54 (147)
332 4auk_A Ribosomal RNA large sub 32.0 29 0.001 34.9 3.5 55 279-342 211-265 (375)
333 3ufb_A Type I restriction-modi 31.5 34 0.0012 35.6 4.1 48 280-327 218-273 (530)
334 2dnt_A Chromodomain protein, Y 31.3 5.1 0.00017 31.1 -1.7 37 392-433 12-50 (78)
335 1id1_A Putative potassium chan 31.2 49 0.0017 27.6 4.4 53 287-342 8-62 (153)
336 2p41_A Type II methyltransfera 29.9 26 0.00088 33.7 2.6 30 279-316 82-111 (305)
337 3dii_A Short-chain dehydrogena 29.3 61 0.0021 29.3 5.0 52 286-340 7-58 (247)
338 3r6d_A NAD-dependent epimerase 29.2 68 0.0023 28.1 5.2 58 281-341 5-64 (221)
339 2hmt_A YUAA protein; RCK, KTN, 29.1 32 0.0011 27.6 2.8 51 286-341 10-60 (144)
340 2l89_A PWWP domain-containing 27.9 34 0.0012 28.0 2.7 43 132-175 3-52 (108)
341 3l9w_A Glutathione-regulated p 27.7 59 0.002 32.7 5.0 51 286-341 8-58 (413)
342 3f2u_A Chromobox protein homol 27.6 14 0.00048 26.5 0.2 33 394-432 3-37 (55)
343 2ee1_A Chromodomain helicase-D 27.5 11 0.00037 28.4 -0.5 41 387-432 5-47 (64)
344 3oj0_A Glutr, glutamyl-tRNA re 27.0 69 0.0024 26.4 4.6 40 287-329 26-65 (144)
345 3p8d_A Medulloblastoma antigen 26.3 92 0.0032 23.5 4.6 37 134-175 6-42 (67)
346 2e5p_A Protein PHF1, PHD finge 26.3 75 0.0026 24.1 4.0 29 133-162 8-36 (68)
347 4fu6_A PC4 and SFRS1-interacti 26.0 29 0.00099 30.1 2.0 41 134-175 22-64 (153)
348 3mts_A Histone-lysine N-methyl 25.3 20 0.00067 26.7 0.6 21 412-432 13-35 (64)
349 2daq_A WHSC1L1 protein, isofor 25.2 20 0.00069 29.2 0.8 28 131-159 5-32 (110)
350 2aot_A HMT, histamine N-methyl 24.8 73 0.0025 29.5 4.8 48 279-327 52-101 (292)
351 4g65_A TRK system potassium up 24.6 75 0.0025 32.3 5.1 52 287-342 8-59 (461)
352 1cyd_A Carbonyl reductase; sho 23.8 1.1E+02 0.0036 27.1 5.5 55 284-341 10-64 (244)
353 2g1u_A Hypothetical protein TM 22.8 48 0.0016 27.8 2.8 50 287-340 24-73 (155)
354 3d3w_A L-xylulose reductase; u 22.7 1.1E+02 0.0039 27.0 5.5 55 284-341 10-64 (244)
355 2aef_A Calcium-gated potassium 22.4 67 0.0023 28.8 3.9 49 286-341 13-61 (234)
356 3qii_A PHD finger protein 20; 22.4 1.1E+02 0.0039 24.1 4.6 38 133-175 20-57 (85)
357 4e12_A Diketoreductase; oxidor 20.5 1.1E+02 0.0036 28.6 5.0 35 289-326 11-45 (283)
358 2ehd_A Oxidoreductase, oxidore 20.5 1.8E+02 0.0061 25.5 6.3 55 284-341 8-62 (234)
359 1yde_A Retinal dehydrogenase/r 20.5 1.1E+02 0.0038 28.0 5.0 56 283-341 11-66 (270)
No 1
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=100.00 E-value=9.3e-75 Score=640.18 Aligned_cols=347 Identities=43% Similarity=0.673 Sum_probs=269.0
Q ss_pred CCCCCCCeeecCCCChhHHHHhCCCCCCCCccccccccccccccccCCCchhHHhhccccceeEEEECCEEEeeCCEEEE
Q 013949 64 NKPDSDLFFVGPPVSVDEALKRYPDRYKYSSKGHKKKKVAAGVSSIGALNEEEEVLQARCHYTQASVDGCLYNLGDDAYV 143 (433)
Q Consensus 64 ~~~~~~~~f~g~p~~~~ear~~wp~ry~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~vdG~~Y~vGD~VyV 143 (433)
+.+|++++|||+|||++|||++|||||+.+... ...++++++++||||.++.+||++|+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v 66 (784)
T 4ft4_B 1 SAGDHEPEFIGSPVAADEARSNWPKRYGRSTAA--------------KKPDEEEELKARCHYRSAKVDNVVYCLGDDVYV 66 (784)
T ss_dssp ----CCCEECSSCCCHHHHHHHCGGGCC--------------------------CCCEEEECSEEEETTEEEETTCEEEE
T ss_pred CCCCCCccccCCcCChHHHhhcCcccccccccC--------------CCccchhccccceeeeeeeECCEEEeCCCeEEE
Confidence 357899999999999999999999999887321 134667899999999999999999999999999
Q ss_pred EeCCCCccEEEEEEEEeecCCCceEEEEEEeeecccccccc------ccCCCCCceeEeeCCcccccccceeeeeEEEee
Q 013949 144 KAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKD------LAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV 217 (433)
Q Consensus 144 ~~~~~~p~yIgrI~ei~e~~dg~~~v~VrWFyRpeDtv~~~------~~~~~d~rELF~S~~~d~~pl~~I~gKC~V~~~ 217 (433)
++++++|+|||+|++||++.+|..||+|+||||++||+++. .++.+|+||||+|+++++||++||.|||+|+++
T Consensus 67 ~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~d~~~~~~s~~~~~~~~~~i~~k~~v~~~ 146 (784)
T 4ft4_B 67 KAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHV 146 (784)
T ss_dssp CCSTTSCCEEEEEEEEEEETTSCEEEEEEEEEEGGGSTTGGGGGCCBTTBCCCTTBEEEEEEEEEEEGGGEEEECCEEEC
T ss_pred eCCCCCCCEEEEEEEEEEcCCCCEEEEEEEeeChhhhcccccccccccccccccceEEEeCcEEEechHHeeeeEEEEee
Confidence 99988899999999999999999999999999999998764 356789999999999999999999999999999
Q ss_pred CcccchhhhccCCCCceEEEeeeccCCCceeEcCCCCCCcCCCCCCCccccCC-CCC--CCCCCCCCcEEecccchhHHH
Q 013949 218 AANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASSTISSET-GSN--SPIGEPEMSLLDLYSGCGAMS 294 (433)
Q Consensus 218 ~~~~~~~~~~~~~~~~~ffy~~~Y~~~~~tF~~lp~e~~~~~s~~~~~i~~~~-~~~--~~~~~~~l~~lDLFsG~GG~s 294 (433)
++..+.+......+.|+|||+|.|...+++|++++.++....++.....+.+. ..+ ...++.+|++|||||||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ltvIDLFAG~GGls 226 (784)
T 4ft4_B 147 DPNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSGSDTASGISSDDVDLETSSSMPTRTATLLDLYSGCGGMS 226 (784)
T ss_dssp CTTSCHHHHHHHHHHCSEEESEEEETGGGEEEEC-----------------------------CEEEEEEEETCTTSHHH
T ss_pred CccccchhhhhccCCcceEeccccCccccCccCCCcccccccccccccccccccccccccccCCCCCeEEEeCcCccHHH
Confidence 99888877667777899999999999999999999887644333222222211 111 124457899999999999999
Q ss_pred HhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHhc-----------------------------
Q 013949 295 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL----------------------------- 345 (433)
Q Consensus 295 ~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~ll----------------------------- 345 (433)
+||+.+...+|..+.++||+|+|+.|++||++|||++.++++||++++...
T Consensus 227 ~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (784)
T 4ft4_B 227 TGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNLASSEDQADEDS 306 (784)
T ss_dssp HHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCHHHHHHHHHHHHHHHHHTC------------------
T ss_pred HHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCcHHHhhhhhhhccccccccccccccccccccccccccc
Confidence 999543322332333489999999999999999999999999998874311
Q ss_pred ----------------------------------------------------------------------------CcCC
Q 013949 346 ----------------------------------------------------------------------------KEWA 349 (433)
Q Consensus 346 ----------------------------------------------------------------------------~~~~ 349 (433)
-..+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~i~~~~~~~~~~~~~~~~G~VDvl~GG 386 (784)
T 4ft4_B 307 PLDKDEFVVEKLVGICYGGSDRENGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGG 386 (784)
T ss_dssp -----CCCEEEEEEEEESCSSSCSSEEEEEEETTCCTTSCEEEESGGGTTCHHHHHHHHHHHHHHTSSCCTTSCSEEEEC
T ss_pred ccccccchhhhhcccccccccccccccchhhhcccccccccccccccccccchhccccccccchhhccCCCCCeEEEEec
Confidence 0125
Q ss_pred CCCchhhcccCCCC----CCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCC------CCCCceEEE
Q 013949 350 KLCQYFSIYDTDKV----PEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT------KKPGVYFKE 419 (433)
Q Consensus 350 ~PCQ~fS~ag~~~~----~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~------~~~gl~~~v 419 (433)
+|||+||.||++++ .+|+|+.||.+++++ ++.++|++|+||||+||+..+.+.. ...++||.|
T Consensus 387 pPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~ri-------v~~~rPk~fvlENV~glls~~~g~~~~~il~~l~~lGY~v 459 (784)
T 4ft4_B 387 PPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDI-------VAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQA 459 (784)
T ss_dssp CCCCSSSGGGGGSCTTSTTTSTTCHHHHHHHHH-------HHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTCEE
T ss_pred CCCcchhhhhcccCcCccccCchhHHHHHHHHH-------HHHHCCCEEEEEecCCccccccchHHHHHHHHHHhCCCee
Confidence 79999999998776 568999999999999 8999999999999999986544431 235789999
Q ss_pred EEEEee-eeecee
Q 013949 420 CCLIIC-YLTFVP 431 (433)
Q Consensus 420 ~w~~~~-~~~~~p 431 (433)
+|+.|+ .+|+||
T Consensus 460 ~~~vLnA~dyGVP 472 (784)
T 4ft4_B 460 RLGMMVAGCYGLP 472 (784)
T ss_dssp EEEEEEGGGGTCS
T ss_pred eeeecCHHHcCCC
Confidence 999994 456687
No 2
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=100.00 E-value=1.1e-51 Score=462.38 Aligned_cols=299 Identities=21% Similarity=0.259 Sum_probs=237.3
Q ss_pred ccccceeEEEECCEEEeeCCEEEEEeCC------------------------------------------CCccEEEEEE
Q 013949 120 QARCHYTQASVDGCLYNLGDDAYVKAEE------------------------------------------GAVDYIARIV 157 (433)
Q Consensus 120 ~~r~~Y~~~~vdG~~Y~vGD~VyV~~~~------------------------------------------~~p~yIgrI~ 157 (433)
+.+.+|.++.++|++|++||||||.++. .+|++||||+
T Consensus 320 ~~~~~~~~~~~~g~~y~vgD~Vyl~p~~~~f~~~~~~~~~~~~~~~vd~~~ype~yrk~~~~~kg~n~~~~~P~~IgrI~ 399 (1002)
T 3swr_A 320 DSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 399 (1002)
T ss_dssp SSCEEESEEEETTEEEETTCEEEECTTSCCCSSCCCCCCCCSCSCCCCTTTCTTSGGGHHHHHTCCCCCCCCCCEEEEEE
T ss_pred CCcEEEEEEEECCEEEecCCEEEECCcccccccccccccccccccccccccchhhhhccchhccccccCCCCCceeeEEe
Confidence 3567999999999999999999999931 3489999999
Q ss_pred EEeecCCCc-------eEEEEEEeeeccccccc-cccCCCCCceeEeeCCcccccccceeeeeEEEeeCcccchhhhccC
Q 013949 158 ELFESVDGE-------PYFKARWFYRAEDTVIK-DLAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKN 229 (433)
Q Consensus 158 ei~e~~dg~-------~~v~VrWFyRpeDtv~~-~~~~~~d~rELF~S~~~d~~pl~~I~gKC~V~~~~~~~~~~~~~~~ 229 (433)
+||.+..+. .+|+|+|||||+||..+ ...+.+|.||||+|++.+++|+++|+|||.|++..+.......+..
T Consensus 400 ~i~~~~~~~~~~~~~~~~v~v~~fyRPed~~~~~~~~~~~D~~elf~S~~~~~~~~~~i~GkC~V~~~~d~~~~~~~~~~ 479 (1002)
T 3swr_A 400 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSM 479 (1002)
T ss_dssp EEEECCCSSSSCCSSCCEEEEEECBCGGGSTTCGGGGSSSCTTEEEECCCEEEEEGGGCCEEEEEEEGGGCSSCHHHHHH
T ss_pred EEEecCCccccCCCccEEEEEEEEECcccccccccccccCCcceEEEecceeccCHHHcceEEEEEEeccccccchhhcc
Confidence 999876654 99999999999999633 3356789999999999999999999999999999875543333444
Q ss_pred CCCceEEEeeeccCCCceeEcCCCCCCcCCCCCCCc-------cc-c-CC-CCCCCCCCCCCcEEecccchhHHHHhHhh
Q 013949 230 IPPCDLYYDMKYTLPHLTFSNINNESNRRDSDASST-------IS-S-ET-GSNSPIGEPEMSLLDLYSGCGAMSTGLCI 299 (433)
Q Consensus 230 ~~~~~ffy~~~Y~~~~~tF~~lp~e~~~~~s~~~~~-------i~-~-~~-~~~~~~~~~~l~~lDLFsG~GG~s~Gl~~ 299 (433)
..+++|||.+.||+.+++|..+|.+.+.+.+..++. .. . +. ......++++|++||||||||||++||
T Consensus 480 ~~p~~fyf~~~Yd~~~~~f~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iDLFaG~GGlslGl-- 557 (1002)
T 3swr_A 480 GGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPKLRTLDVFSGCGGLSEGF-- 557 (1002)
T ss_dssp TSSSEEEEEEEEETTTTEEECCCSTTSCC----------------------CCCCCCCCCCEEEEEESCTTSHHHHHH--
T ss_pred CCCCeEEEEEEEeCCCCeeecCccccccccccccccccccccccccccccccccccccCCCCeEEEeccCccHHHHHH--
Confidence 456899999999999999999999988766532111 00 0 01 111125668899999999999999999
Q ss_pred hhhcCCC-eEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHh-------------cC--------cCCCCCchhhc
Q 013949 300 GASLSGV-KLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL-------------LK--------EWAKLCQYFSI 357 (433)
Q Consensus 300 ga~~aG~-~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~l-------------l~--------~~~~PCQ~fS~ 357 (433)
++||+ ++ +||+|+|+.|++||++|||++.+++.||.+++.. +. ..++|||+||.
T Consensus 558 --~~AG~~~v--v~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~vDll~GGpPCQ~FS~ 633 (1002)
T 3swr_A 558 --HQAGISDT--LWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSG 633 (1002)
T ss_dssp --HHHTSEEE--EEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTTCSEEEECCCCTTCCS
T ss_pred --HHCCCCce--EEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCCeeEEEEcCCCcchhh
Confidence 88998 64 8999999999999999999999999999887421 10 12569999999
Q ss_pred ccCCCC--CCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCC------CCCCceEEEEEEEee-eee
Q 013949 358 YDTDKV--PEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT------KKPGVYFKECCLIIC-YLT 428 (433)
Q Consensus 358 ag~~~~--~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~------~~~gl~~~v~w~~~~-~~~ 428 (433)
+|+.++ ..|.|+.|+.+++++ ++.++|++|+||||+||+..+.+.. ....+||.|+|..|+ .++
T Consensus 634 ag~~~~~~~~d~R~~L~~~~~ri-------v~~~rPk~~llENV~glls~~~~~~~~~i~~~L~~lGY~v~~~vLnA~dy 706 (1002)
T 3swr_A 634 MNRFNSRTYSKFKNSLVVSFLSY-------CDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQY 706 (1002)
T ss_dssp SSCCCHHHHHHHTTSHHHHHHHH-------HHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHHHHHHTCEEEEEEEEGGGG
T ss_pred hCCCCCCcccchhhHHHHHHHHH-------HHHhCCCEEEEeccHHHhccCcchHHHHHHHHHHhcCCeEEEEEEEHHHC
Confidence 996533 457899999999999 8899999999999999986433221 124689999999994 456
Q ss_pred cee
Q 013949 429 FVP 431 (433)
Q Consensus 429 ~~p 431 (433)
++|
T Consensus 707 GvP 709 (1002)
T 3swr_A 707 GVA 709 (1002)
T ss_dssp TCS
T ss_pred CCC
Confidence 687
No 3
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=100.00 E-value=1.2e-49 Score=455.12 Aligned_cols=298 Identities=19% Similarity=0.236 Sum_probs=233.7
Q ss_pred cccceeEEEECCEEEeeCCEEEEEeCC------------------------------------------CCccEEEEEEE
Q 013949 121 ARCHYTQASVDGCLYNLGDDAYVKAEE------------------------------------------GAVDYIARIVE 158 (433)
Q Consensus 121 ~r~~Y~~~~vdG~~Y~vGD~VyV~~~~------------------------------------------~~p~yIgrI~e 158 (433)
.++||.++.++|+.|++||||||.++. .+|++||||.+
T Consensus 633 ~~~~Y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~~~~~ype~yrk~~~~~kg~~~~~~~Py~IgqI~e 712 (1330)
T 3av4_A 633 GRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKE 712 (1330)
T ss_dssp SSEEEEEEEETTEEEETTCEEEECTTSCCCCCCC-------CCCCCCTTTCSSGGGGGC-------CCCCCCCEEEEEEE
T ss_pred CceeeeEEEECCEEEecCCEEEECcccccccccccccccccccccccccccchhhhcccccccccccCCCCCceEEEEEE
Confidence 478999999999999999999997751 36889999999
Q ss_pred EeecCC------CceEEEEEEeeecccccccc-ccCCCCCceeEeeCCcccccccceeeeeEEEeeCcccchhhhccCCC
Q 013949 159 LFESVD------GEPYFKARWFYRAEDTVIKD-LAYLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIP 231 (433)
Q Consensus 159 i~e~~d------g~~~v~VrWFyRpeDtv~~~-~~~~~d~rELF~S~~~d~~pl~~I~gKC~V~~~~~~~~~~~~~~~~~ 231 (433)
||.+.+ +..+|+|+|||||+||..+. ..+.+|.||||+|++.+++|+++|.|||.|++..+.......+....
T Consensus 713 I~~~~~s~~~~~~~~~vrV~wFyRPedt~~~~~~~~~~D~nELf~S~~~~~vp~~~I~GKC~V~~~~d~~~~i~~y~~~g 792 (1330)
T 3av4_A 713 IHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYSQGG 792 (1330)
T ss_dssp CCCCEETTEECSSCCEEEEEEEECTTTSTTGGGTTTTSCTTBCEEEEEEEEEEGGGCCEEEEEEESTTCSSCHHHHHHTS
T ss_pred EEecCCccccCCCceEEEEEEeeChhhcccccccccccCcceEEeeccceecCHHHcCceEEEEecccccccccccccCC
Confidence 998765 57999999999999996543 24578999999999999999999999999999987555322344444
Q ss_pred CceEEEeeeccCCCceeEcCCCCCCcCCCCCCCc-----cc--cCC---CCCCCCCCCCCcEEecccchhHHHHhHhhhh
Q 013949 232 PCDLYYDMKYTLPHLTFSNINNESNRRDSDASST-----IS--SET---GSNSPIGEPEMSLLDLYSGCGAMSTGLCIGA 301 (433)
Q Consensus 232 ~~~ffy~~~Y~~~~~tF~~lp~e~~~~~s~~~~~-----i~--~~~---~~~~~~~~~~l~~lDLFsG~GG~s~Gl~~ga 301 (433)
++.|||.+.|+..+++|..+|...+.+.+..... .. ..+ +.....++.+|++||||||||||++||
T Consensus 793 ~d~Fy~~~~Yd~~~k~~~~~P~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~~~~l~viDLFsG~GGlslGf---- 868 (1330)
T 3av4_A 793 PDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF---- 868 (1330)
T ss_dssp TTEEEESCEEETTTTEEECCCGGGCC-----------------------------CCCCEEEEEETCTTSHHHHHH----
T ss_pred CCeEEEEEEecccCCeeccCchHhhcccccccccccccccccccccccccchhhhccCCceEEecccCccHHHHHH----
Confidence 6899999999999999999888877543321100 00 000 000112457899999999999999999
Q ss_pred hcCCC-eEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHhc-------------C--------cCCCCCchhhccc
Q 013949 302 SLSGV-KLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL-------------K--------EWAKLCQYFSIYD 359 (433)
Q Consensus 302 ~~aG~-~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~ll-------------~--------~~~~PCQ~fS~ag 359 (433)
++||+ ++ +||+|+|+.|++||++|||++.++++||.++.... . ..++|||+||.+|
T Consensus 869 e~AG~~~v--v~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp~~~~vDvl~GGpPCQ~FS~ag 946 (1330)
T 3av4_A 869 HQAGISET--LWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMN 946 (1330)
T ss_dssp HHTTSEEE--EEEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHHTTTCSBCSSCCBCCCTTTCSEEEECCCCTTTCSSS
T ss_pred HHCCCCce--EEEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhhhccchhhhhhhhccccCccceEEecCCCccccccc
Confidence 88998 54 79999999999999999999989999998875321 0 1256999999999
Q ss_pred CCCC--CCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCC------CCCCceEEEEEEEee-eeece
Q 013949 360 TDKV--PEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT------KKPGVYFKECCLIIC-YLTFV 430 (433)
Q Consensus 360 ~~~~--~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~------~~~gl~~~v~w~~~~-~~~~~ 430 (433)
+.+. ..|.|+.|+.+++++ ++.++|++|+||||+||+..+.+.. ....+||.|+|..|+ .+++|
T Consensus 947 r~~~~~~~d~R~~L~~~~lri-------v~~~rPk~fv~ENV~glls~~~g~~~~~il~~L~~lGY~v~~~vLnA~dyGV 1019 (1330)
T 3av4_A 947 RFNSRTYSKFKNSLVVSFLSY-------CDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGV 1019 (1330)
T ss_dssp CCCHHHHHHHHHSHHHHHHHH-------HHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHHHHHHTCEEEEEEEEGGGGSC
T ss_pred ccccccccchhhHHHHHHHHH-------HHHhcCcEEEEeccHHHhccCccHHHHHHHHHHHhcCCeeeEEEecHHHcCC
Confidence 6532 457889999999999 8899999999999999986543321 124689999999994 46668
Q ss_pred e
Q 013949 431 P 431 (433)
Q Consensus 431 p 431 (433)
|
T Consensus 1020 P 1020 (1330)
T 3av4_A 1020 A 1020 (1330)
T ss_dssp S
T ss_pred C
Confidence 8
No 4
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=99.96 E-value=6.2e-31 Score=261.54 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=118.4
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHh-cC-----cCCCCCch
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL-LK-----EWAKLCQY 354 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~l-l~-----~~~~PCQ~ 354 (433)
|++||||||||||++|| +.|||++ +||+|+|+.|++||++|||+ .++++||.++... +. ..++|||+
T Consensus 1 mkvidLFsG~GG~~~G~----~~aG~~~--v~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGF----QKAGFRI--ICANEYDKSIWKTYESNHSA-KLIKGDISKISSDEFPKCDGIIGGPPSQS 73 (331)
T ss_dssp CEEEEESCTTCHHHHHH----HHTTCEE--EEEEECCTTTHHHHHHHCCS-EEEESCGGGCCGGGSCCCSEEECCCCGGG
T ss_pred CeEEEeCcCccHHHHHH----HHCCCEE--EEEEeCCHHHHHHHHHHCCC-CcccCChhhCCHhhCCcccEEEecCCCCC
Confidence 68999999999999999 8899997 79999999999999999996 6888999887532 21 24679999
Q ss_pred hhcccCCCCCCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCC------CCCCceEEEEEEEeee-e
Q 013949 355 FSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT------KKPGVYFKECCLIICY-L 427 (433)
Q Consensus 355 fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~------~~~gl~~~v~w~~~~~-~ 427 (433)
||.+|++++.+|+|+.|+.+++++ ++..+|++|++|||+||++.+.+.. ....+||.|.|+.|+- +
T Consensus 74 fS~ag~~~g~~d~R~~L~~~~~r~-------i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~ 146 (331)
T 3ubt_Y 74 WSEGGSLRGIDDPRGKLFYEYIRI-------LKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNAND 146 (331)
T ss_dssp TEETTEECCTTCGGGHHHHHHHHH-------HHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGG
T ss_pred cCCCCCccCCCCchhHHHHHHHHH-------HhccCCeEEEeeeecccccccccchhhhhhhhhccCCcEEEEEeccccc
Confidence 999999999999999999999999 8899999999999999997655432 2257899999999955 5
Q ss_pred ecee
Q 013949 428 TFVP 431 (433)
Q Consensus 428 ~~~p 431 (433)
++||
T Consensus 147 yGvP 150 (331)
T 3ubt_Y 147 YGVA 150 (331)
T ss_dssp TTCS
T ss_pred CCCC
Confidence 5588
No 5
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=99.94 E-value=1.7e-28 Score=246.87 Aligned_cols=142 Identities=20% Similarity=0.163 Sum_probs=117.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHH--h------cCcCCC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS--L------LKEWAK 350 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~--l------l~~~~~ 350 (433)
++++++|||||||||++|| +.+|+...++||+|+|+.|++||++|||++.+++.||.++.. + +-..++
T Consensus 2 m~~~~idLFaG~GG~~~G~----~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 2 MSHKILELYSGIGGMHCAW----KESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp -CEEEEEETCTTTHHHHHH----HHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CCCEEEEECcCccHHHHHH----HHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecC
Confidence 5789999999999999999 788984344899999999999999999998889999986632 1 112467
Q ss_pred CCchhhcccCCCCCCcccCchHHHHHhcccccCCCCCCCC-CcEEEEeccccccccCCCC---CCCCCceEEEEEEEeee
Q 013949 351 LCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVP-NEEFEVESLTAVCYGDPNK---TKKPGVYFKECCLIICY 426 (433)
Q Consensus 351 PCQ~fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~-P~~fvvENV~gi~~~~p~~---~~~~gl~~~v~w~~~~~ 426 (433)
|||+||.+|++++.+|+|+.||.+++++ ++.++ |++|++|||+||+.+..-. .....+||.|.|..++-
T Consensus 78 PCQ~fS~ag~~~~~~d~r~~L~~~~~r~-------i~~~~~P~~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~~vl~a 150 (333)
T 4h0n_A 78 PCQPFTRNGKYLDDNDPRTNSFLYLIGI-------LDQLDNVDYILMENVKGFENSTVRNLFIDKLKECNFIYQEFLLCP 150 (333)
T ss_dssp CCCCSEETTEECCTTCTTSCCHHHHHHH-------GGGCTTCCEEEEEECTTGGGSHHHHHHHHHHHHTTEEEEEEEECT
T ss_pred CCcchhhhhhccCCcCcccccHHHHHHH-------HHHhcCCCEEEEecchhhhhhhHHHHHHHHHHhCCCeEEEEEecH
Confidence 9999999999899999999999999999 78887 9999999999998642111 12257899999999954
Q ss_pred -eecee
Q 013949 427 -LTFVP 431 (433)
Q Consensus 427 -~~~~p 431 (433)
++++|
T Consensus 151 ~~~GvP 156 (333)
T 4h0n_A 151 STVGVP 156 (333)
T ss_dssp TTTTCS
T ss_pred HHcCCC
Confidence 55588
No 6
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=99.94 E-value=2.4e-27 Score=217.83 Aligned_cols=136 Identities=24% Similarity=0.312 Sum_probs=101.7
Q ss_pred hccccceeEEEECCEEEeeCCEEEEEeCC-CCccEEEEEEEEeecCCCceEEEEEEeeeccccccccccCCCCCceeEee
Q 013949 119 LQARCHYTQASVDGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLS 197 (433)
Q Consensus 119 ~~~r~~Y~~~~vdG~~Y~vGD~VyV~~~~-~~p~yIgrI~ei~e~~dg~~~v~VrWFyRpeDtv~~~~~~~~d~rELF~S 197 (433)
-+.|.||+++.++|.+|++||||||.+++ +.++|||+|++||++.+|.++++|+|||||+||..+. ...+.++|||+|
T Consensus 11 ~~~r~~y~~~~~~g~~~~vGD~V~v~~~~~~~~p~I~rI~~i~~~~~g~~~v~v~WfyRPeet~~~~-~~~~~~~EvF~S 89 (174)
T 1w4s_A 11 SLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLA-TRKFLEKEVFKS 89 (174)
T ss_dssp ---------------CCCTTCEEEECCSSTTSCCEEEEEEEEEECTTCCEEEEEEEEECGGGSCCCT-TCEEETTEEEEE
T ss_pred CCCcEEeEEEEECCEEEECCCEEEEeCCCCCCCCEEEEEEEEEEcCCCCEEEEEEEecCHHHccccc-CCcCCCCeeEEe
Confidence 46678999999999999999999999984 5788999999999999999999999999999996543 234569999999
Q ss_pred CCcccccccceeeeeEEEeeCcccchhhhccCCCCceEEEeeeccCCCceeEcCCCCCC
Q 013949 198 DVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESN 256 (433)
Q Consensus 198 ~~~d~~pl~~I~gKC~V~~~~~~~~~~~~~~~~~~~~ffy~~~Y~~~~~tF~~lp~e~~ 256 (433)
++.+++|+++|.|||.|++.++....... .....+.|||++.||..+++|..++....
T Consensus 90 ~~~d~~~~~~I~gkC~V~~~~~~~~~~p~-~~~~~dvF~c~~~Yd~~~~~f~~i~~w~~ 147 (174)
T 1w4s_A 90 DYYNKVPVSKILGKCVVMFVKEYFKLCPE-NFRDEDVYVCESRYSAKTKSFKKIKLWTM 147 (174)
T ss_dssp EEEEEEEGGGEEEEEEEEEHHHHTTEEET-TCCGGGEEEEEEEEETTTTEEEECSSCCC
T ss_pred CCcceecHHHeeeeEEEEECchhhhcCcC-CCCCCCEEEEeEEEccccCeEccCccCCC
Confidence 99999999999999999999865443111 11223569999999999999999987654
No 7
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=99.93 E-value=2.9e-28 Score=248.82 Aligned_cols=139 Identities=19% Similarity=0.209 Sum_probs=110.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHH--h---c---C----
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS--L---L---K---- 346 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~--l---l---~---- 346 (433)
|+|++||||||||||++|| +.+|+++ +||+|+|+.|++||++|||++.++++||.++.. + . .
T Consensus 1 m~~~vidLFsG~GGlslG~----~~aG~~~--v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 1 MSLNVIDLFSGVGGLSLGA----ARAGFDV--KMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp -CCEEEEETCTTSHHHHHH----HHHTCEE--EEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CCCeEEEEccCcCHHHHHH----HHCCCcE--EEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 3689999999999999999 7899996 799999999999999999999999999987631 1 0 1
Q ss_pred -cCCCCCchhhcccCCCCCCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCC-----CCCCceEEE-
Q 013949 347 -EWAKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT-----KKPGVYFKE- 419 (433)
Q Consensus 347 -~~~~PCQ~fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~-----~~~gl~~~v- 419 (433)
..++|||+||.+|++ +.+|+|+.|+.+++++ ++.++|++|++|||+||++.+.... ....+||.|
T Consensus 75 i~ggpPCQ~fS~ag~~-~~~d~r~~L~~~~~~~-------v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~~l~~~GY~v~ 146 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKG-NPDDSRNQLYMHFYRL-------VSELQPLFFLAENVPGIMQEKYSGIRNKAFNLVSGDYDIL 146 (376)
T ss_dssp EEECCCCCTTC--------CHHHHHHHHHHHHH-------HHHHCCSEEEEEECTTTTCGGGHHHHHHHHHHHHTTEEEC
T ss_pred EEecCCCCCcccccCC-CCCCchHHHHHHHHHH-------HHHhCCCEEEEecchHhhccCcHHHHHHHHHHHcCCCccC
Confidence 136799999999965 7889999999999999 8899999999999999986433221 224679999
Q ss_pred EEEEe-eeeecee
Q 013949 420 CCLII-CYLTFVP 431 (433)
Q Consensus 420 ~w~~~-~~~~~~p 431 (433)
+|+.| +.+++||
T Consensus 147 ~~~vl~a~dyGvP 159 (376)
T 3g7u_A 147 DPIKVKASDYGAP 159 (376)
T ss_dssp CCEEEEGGGGTCS
T ss_pred cEEEEEHhhCCCC
Confidence 99999 4566688
No 8
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=99.93 E-value=1.2e-27 Score=239.94 Aligned_cols=139 Identities=16% Similarity=0.127 Sum_probs=116.8
Q ss_pred CCCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHh-cC-----cCCCC
Q 013949 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL-LK-----EWAKL 351 (433)
Q Consensus 278 ~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~l-l~-----~~~~P 351 (433)
+.+++++|||||+||+++|| +.+|+++ +|++|+|+.|++||++|||++. ++||.++... +. ..++|
T Consensus 9 ~~~~~~~dLFaG~Gg~~~g~----~~aG~~~--v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 9 LTGLRFIDLFAGLGGFRLAL----ESCGAEC--VYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TTTCEEEEETCTTTHHHHHH----HHTTCEE--EEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECC
T ss_pred cCCCcEEEECCCcCHHHHHH----HHCCCeE--EEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCC
Confidence 45789999999999999999 7899996 7999999999999999999864 7899887532 21 13579
Q ss_pred CchhhcccCCCCCCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCC------CCCCceEEEEEEEee
Q 013949 352 CQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKT------KKPGVYFKECCLIIC 425 (433)
Q Consensus 352 CQ~fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~------~~~gl~~~v~w~~~~ 425 (433)
||+||.||++++..|+|+.|+.+++++ ++..+|++|++|||+||+..+.+.. ....+||.|.|+.|+
T Consensus 81 CQ~fS~ag~~~g~~d~r~~L~~~~~r~-------i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~ 153 (327)
T 2c7p_A 81 CQAFSISGKQKGFEDSRGTLFFDIARI-------VREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLN 153 (327)
T ss_dssp CTTTCTTSCCCGGGSTTSCHHHHHHHH-------HHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEEEEEE
T ss_pred CCCcchhcccCCCcchhhHHHHHHHHH-------HHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEEEEEE
Confidence 999999999888889999999999999 8889999999999999986433221 225689999999995
Q ss_pred e-eecee
Q 013949 426 Y-LTFVP 431 (433)
Q Consensus 426 ~-~~~~p 431 (433)
- ++++|
T Consensus 154 a~~~GvP 160 (327)
T 2c7p_A 154 ALDYGIP 160 (327)
T ss_dssp GGGGTCS
T ss_pred HHHcCCC
Confidence 5 55588
No 9
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=99.93 E-value=2e-27 Score=238.45 Aligned_cols=142 Identities=15% Similarity=0.092 Sum_probs=116.3
Q ss_pred CCCCcEEecccchhHHHHhHhhhhhcCCCeEeeE-EEeecCHhhHHHHHHcCCCCceeecChhhHHH--h------cCcC
Q 013949 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTR-WAIDINPHACKSLKFNHPETKVRNEAADDFLS--L------LKEW 348 (433)
Q Consensus 278 ~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~-~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~--l------l~~~ 348 (433)
..+++++||||||||+++|| +.+|+...++ ||+|+|+.|++||++|||++ +++.||.++.. + +-..
T Consensus 8 ~~~~~vidLFaG~GG~~~G~----~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSY----ERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHH----HHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCCCEEEEECCChhHHHHHH----HHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEe
Confidence 35799999999999999999 8899733348 99999999999999999987 78899976532 1 1124
Q ss_pred CCCCchh--hcccCCCCCCcccCchHHHHHh-cccccCCCCCCC--CCcEEEEeccccccccCCCC---CCCCCceEEEE
Q 013949 349 AKLCQYF--SIYDTDKVPEQSLNFMSEDEEE-EEEEENDDDSNV--PNEEFEVESLTAVCYGDPNK---TKKPGVYFKEC 420 (433)
Q Consensus 349 ~~PCQ~f--S~ag~~~~~~d~r~~L~~~~~~-~~~~~~~~i~~~--~P~~fvvENV~gi~~~~p~~---~~~~gl~~~v~ 420 (433)
++|||+| |.+|++++..|+|+.|+.++++ + ++.+ +|++|++|||+||+.+..-. .....+||.|.
T Consensus 83 gpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~-------i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~ 155 (327)
T 3qv2_A 83 SPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDI-------LPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQYYIK 155 (327)
T ss_dssp CCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTT-------GGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTCEEE
T ss_pred cCCccCcccccCCCCCCCccccchhHHHHHHHH-------HHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCCEEE
Confidence 6799999 9999999999999999999999 9 7777 89999999999998632111 12257899999
Q ss_pred EEEeee-eecee
Q 013949 421 CLIICY-LTFVP 431 (433)
Q Consensus 421 w~~~~~-~~~~p 431 (433)
|+.|+- ++++|
T Consensus 156 ~~vl~a~~yGvP 167 (327)
T 3qv2_A 156 DIICSPIDIGIP 167 (327)
T ss_dssp EEEECGGGGTCS
T ss_pred EEEEeHHHcCCC
Confidence 999955 55588
No 10
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=99.93 E-value=3.7e-27 Score=237.67 Aligned_cols=141 Identities=18% Similarity=0.180 Sum_probs=98.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHH--h------cCcCCCC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS--L------LKEWAKL 351 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~--l------l~~~~~P 351 (433)
++++||||||+||+++|| +.+|+...++|++|+|+.|++||++|||++.++++||.++.. + +-..++|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~----~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHAL----RESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp CEEEEEETCTTCHHHHHH----HHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CCeEEEeCcCccHHHHHH----HHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 579999999999999999 788944334899999999999999999998889999987642 1 1124689
Q ss_pred CchhhcccCCCCCCcccCchHHHHHhcccccCCCCCCCC--CcEEEEeccccccccCCCC---CCCCCceEEEEEEEeee
Q 013949 352 CQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVP--NEEFEVESLTAVCYGDPNK---TKKPGVYFKECCLIICY 426 (433)
Q Consensus 352 CQ~fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~--P~~fvvENV~gi~~~~p~~---~~~~gl~~~v~w~~~~~ 426 (433)
||+||.+|++++..|+|+.|+.+++++ +..++ |++|++|||+||+.+..-. .....+||.|.|+.|+-
T Consensus 78 Cq~fS~ag~~~g~~d~r~~l~~~~~~~-------i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~~vl~a 150 (343)
T 1g55_A 78 CQPFTRIGRQGDMTDSRTNSFLHILDI-------LPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSP 150 (343)
T ss_dssp ------------------CHHHHHHHH-------GGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTEEEEEEEECG
T ss_pred CcchhhcCCcCCccCccchHHHHHHHH-------HHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCCeeEEEEEEH
Confidence 999999999888899999999999999 77888 9999999999998531111 11246899999999954
Q ss_pred -eecee
Q 013949 427 -LTFVP 431 (433)
Q Consensus 427 -~~~~p 431 (433)
++++|
T Consensus 151 ~~~GvP 156 (343)
T 1g55_A 151 TSLGIP 156 (343)
T ss_dssp GGGTCS
T ss_pred HHCCCC
Confidence 55588
No 11
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=99.92 E-value=2.1e-25 Score=250.31 Aligned_cols=132 Identities=25% Similarity=0.362 Sum_probs=114.5
Q ss_pred ccceeEEEECCEEEeeCCEEEEEeC-CCCccEEEEEEEEeecCCCceEEEEEEeeeccccccccccCCCCCceeEeeCCc
Q 013949 122 RCHYTQASVDGCLYNLGDDAYVKAE-EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVE 200 (433)
Q Consensus 122 r~~Y~~~~vdG~~Y~vGD~VyV~~~-~~~p~yIgrI~ei~e~~dg~~~v~VrWFyRpeDtv~~~~~~~~d~rELF~S~~~ 200 (433)
+.||+++.++|++|+|||||||.++ ++.|+|||+|++||++.+|.+||+|+|||||+||+++. .++++|||+|+++
T Consensus 146 ~~~Y~s~~v~g~~i~VGD~V~v~~~d~~~ppyIarIe~m~ed~~g~k~~~v~Wf~rp~ET~lg~---~~~~~ElFlsd~c 222 (1002)
T 3swr_A 146 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGA---TSDPLELFLVDEC 222 (1002)
T ss_dssp EEECSEEEETTEEEETTCEEEECBSSTTSCCEEEEEEEEEEETTTEEEEEEEEEEEGGGSTTGG---GSCTTEEEEEEEE
T ss_pred ceeeeEEEECCEEEecCCEEEEecCCCCCCceEEEEEEEeecCCCCeEEEEEEEecchhccccc---CCCCCceEeeccc
Confidence 4599999999999999999999998 66788999999999999999999999999999999886 4899999999999
Q ss_pred ccccccceeeeeEEEeeCccc--------chhhhccCCCCceEEEeeeccCCCceeEcCCCCCC
Q 013949 201 DDNPLNCIVSKAKIAEVAANM--------DLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNESN 256 (433)
Q Consensus 201 d~~pl~~I~gKC~V~~~~~~~--------~~~~~~~~~~~~~ffy~~~Y~~~~~tF~~lp~e~~ 256 (433)
+++|+++|.|||+|+++.+.. +..........++|||.+.|++.+++|.+||.+..
T Consensus 223 d~~~l~~I~gkc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~~~~ 286 (1002)
T 3swr_A 223 EDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQP 286 (1002)
T ss_dssp EEEEGGGEEEEECEEECCCCTTGGGCTTCCCCCSCCCCCCTSEEEEEEEETTTTEEECCCCCCC
T ss_pred cCCcHHHhceeeEEEEccCCcchhhhcccccccccccCCCCeEEEEEEECCCCCcccCCChhhc
Confidence 999999999999999987611 11111122236899999999999999999997654
No 12
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=99.92 E-value=2e-25 Score=255.86 Aligned_cols=131 Identities=24% Similarity=0.368 Sum_probs=111.9
Q ss_pred ccceeEEEECCEEEeeCCEEEEEeC-CCCccEEEEEEEEeecCCCceEEEEEEeeeccccccccccCCCCCceeEeeCCc
Q 013949 122 RCHYTQASVDGCLYNLGDDAYVKAE-EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAYLVDRKRVFLSDVE 200 (433)
Q Consensus 122 r~~Y~~~~vdG~~Y~vGD~VyV~~~-~~~p~yIgrI~ei~e~~dg~~~v~VrWFyRpeDtv~~~~~~~~d~rELF~S~~~ 200 (433)
++||+++.++|.+|++||||||.++ +++|+|||+|++||++.+|.+||+|+|||||+||+++. .++++|||+|+++
T Consensus 457 ~~~Y~~~~v~g~~~~vGD~V~v~~~d~~~p~yiarIe~iwe~~dg~~~~~~~WfyRp~ETvlg~---~~~~rElFlS~~~ 533 (1330)
T 3av4_A 457 RTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDTVLGA---TSDPLELFLVGEC 533 (1330)
T ss_dssp CEEECSEEEESSEEETTCEEEECBCCSSCCCEEEEEEEEEEETTCCEEEEEEEEEEGGGSTTGG---GSCTTEEEEEEEE
T ss_pred ceeeeEEEECCEEEecCCEEEEeCCCCCCCCEEEEEeeeeecCCCCEEEEEEEEEchHHccccc---ccCCCeEEEeccc
Confidence 5699999999999999999999987 46789999999999999999999999999999998876 5899999999999
Q ss_pred ccccccceeeeeEEEeeCcccch-------hhh--ccCCCCceEEEeeeccCCCceeEcCCCCC
Q 013949 201 DDNPLNCIVSKAKIAEVAANMDL-------EAK--QKNIPPCDLYYDMKYTLPHLTFSNINNES 255 (433)
Q Consensus 201 d~~pl~~I~gKC~V~~~~~~~~~-------~~~--~~~~~~~~ffy~~~Y~~~~~tF~~lp~e~ 255 (433)
|++|+++|.|||+|+++.+..+. +.. ......++|||++.|++.+++|.++|.+.
T Consensus 534 d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~C~~~Yd~~~~~F~~lp~~~ 597 (1330)
T 3av4_A 534 ENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFESPPKTQ 597 (1330)
T ss_dssp EEEEGGGEEEEECEEECCCCTTSTTCCC-------------CCEEEEEEEETTTTEEECCCCCC
T ss_pred ccCcHHHhcceeEEEEeccchhhhhhcccCccccccccccCCceEEEeEECCccCccCCcCcCC
Confidence 99999999999999998763221 111 11234578999999999999999999853
No 13
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=99.92 E-value=3e-26 Score=240.52 Aligned_cols=141 Identities=23% Similarity=0.236 Sum_probs=109.8
Q ss_pred CCCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhHHH-----------
Q 013949 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDFLS----------- 343 (433)
Q Consensus 278 ~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~~~----------- 343 (433)
..++++|||||||||+++|| +.+|+++ +||+|+|+.|++||++|| |++.++++||.++..
T Consensus 86 ~~~~~viDLFaG~GGlslG~----~~aG~~~--v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~ 159 (482)
T 3me5_A 86 HYAFRFIDLFAGIGGIRRGF----ESIGGQC--VFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAA 159 (482)
T ss_dssp CCSEEEEEESCTTSHHHHHH----HTTTEEE--EEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHH
T ss_pred CccceEEEecCCccHHHHHH----HHCCCEE--EEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhH
Confidence 35799999999999999999 8899986 799999999999999999 778899999998861
Q ss_pred ------hcC-----cCCCCCchhhcccCCCC--------C-CcccCchHHHHHhcccccCCCCCCCCCcEEEEecccccc
Q 013949 344 ------LLK-----EWAKLCQYFSIYDTDKV--------P-EQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVC 403 (433)
Q Consensus 344 ------ll~-----~~~~PCQ~fS~ag~~~~--------~-~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~ 403 (433)
.+. ..++|||+||.||++++ . .|+|+.||.+++++ ++..+|++|+||||+||+
T Consensus 160 ~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~ri-------I~~~rPk~fvlENV~gl~ 232 (482)
T 3me5_A 160 AEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRI-------IDARRPAMFVLENVKNLK 232 (482)
T ss_dssp HHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHH-------HHHHCCSEEEEEEETTTT
T ss_pred HhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHH-------HHHcCCcEEEEeCcHHHh
Confidence 111 13579999999996542 2 37899999999999 889999999999999998
Q ss_pred ccCCCCC------CCCCceEEEE---------EEEeeeeecee
Q 013949 404 YGDPNKT------KKPGVYFKEC---------CLIICYLTFVP 431 (433)
Q Consensus 404 ~~~p~~~------~~~gl~~~v~---------w~~~~~~~~~p 431 (433)
..+.+.+ ....|||.|. |+.|+-.+|||
T Consensus 233 s~~~g~~f~~i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~vP 275 (482)
T 3me5_A 233 SHDKGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLP 275 (482)
T ss_dssp TGGGGHHHHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGTSS
T ss_pred cccCCcHHHHHHHHHhcCCcEEEeccccCcccceeeeccccCC
Confidence 6543321 2257899997 67886666687
No 14
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.91 E-value=2.3e-25 Score=220.57 Aligned_cols=141 Identities=11% Similarity=0.040 Sum_probs=110.6
Q ss_pred CCCCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHh-c--------Cc
Q 013949 277 GEPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL-L--------KE 347 (433)
Q Consensus 277 ~~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~l-l--------~~ 347 (433)
.+.++++|||||||||+++|| +.+|++++++|++|+|+.|++||++|||++.++++||.++... + -.
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~----~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVL----KDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHH----HHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred cCCCCEEEEeCcCccHHHHHH----HHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEE
Confidence 346899999999999999999 8899998667999999999999999999888899999876421 1 12
Q ss_pred CCCCCchhhccc-CCCCCCcccCchHHHHHhcccccCCCCCCCCCc-------EEEEeccccccccCCCCCCCCCceEEE
Q 013949 348 WAKLCQYFSIYD-TDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNE-------EFEVESLTAVCYGDPNKTKKPGVYFKE 419 (433)
Q Consensus 348 ~~~PCQ~fS~ag-~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~P~-------~fvvENV~gi~~~~p~~~~~~gl~~~v 419 (433)
.++|||+||.+| ++++.+|+|+.|+.+++++ ++..+|+ +|++|||+||+..+.... .. -+++
T Consensus 89 ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~ri-------i~~~~P~~~~~~P~~~l~ENV~gl~~~~~~~~-~~--~l~~ 158 (295)
T 2qrv_A 89 GGSPCNDLSIVNPARKGLYEGTGRLFFEFYRL-------LHDARPKEGDDRPFFWLFENVVAMGVSDKRDI-SR--FLES 158 (295)
T ss_dssp ECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHH-------HHHHSCCTTCCCCCEEEEEEESSBCHHHHHHH-HH--HHTS
T ss_pred ecCCCccccccCccccccccccchhHHHHHHH-------HHHhCcccccCCccEEEEEcCcchhhcCccHH-HH--HHhc
Confidence 467999999999 7778889999999999999 6677777 999999999985421110 00 0112
Q ss_pred EEEEeeeeecee
Q 013949 420 CCLIICYLTFVP 431 (433)
Q Consensus 420 ~w~~~~~~~~~p 431 (433)
.|+.|+...|+|
T Consensus 159 ~~~vl~a~~~~P 170 (295)
T 2qrv_A 159 NPVMIDAKEVSA 170 (295)
T ss_dssp CCCCEEGGGTSS
T ss_pred CcEEeecceECC
Confidence 466676655565
No 15
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=99.90 E-value=1.6e-25 Score=230.39 Aligned_cols=152 Identities=11% Similarity=-0.021 Sum_probs=112.0
Q ss_pred CCCCCCcEEecccchhHHHHhHhhhhhcCCCe----EeeEEEeecCHhhHHHHHHcCCCCce------------------
Q 013949 276 IGEPEMSLLDLYSGCGAMSTGLCIGASLSGVK----LVTRWAIDINPHACKSLKFNHPETKV------------------ 333 (433)
Q Consensus 276 ~~~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~----~~t~~avD~d~~A~~t~~~N~p~~~v------------------ 333 (433)
.++.++++|||||||||+++|| +.+|+. +++++|+|+|+.|+.||++|||....
T Consensus 6 ~~~~~lrvldLFsGiGG~~~Gl----~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k 81 (403)
T 4dkj_A 6 DKIKVIKVFEAFAGIGSQFKAL----KNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSK 81 (403)
T ss_dssp CCCEEEEEEEETCTTCHHHHHH----HHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSS
T ss_pred cccccceEEEEecCcCHHHHHH----HHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhcccccc
Confidence 3456799999999999999999 777842 23389999999999999999986410
Q ss_pred ----------------------------eecChhhHHHh-c------CcCCCCCchhhcccCCCCCCc---ccCchHHHH
Q 013949 334 ----------------------------RNEAADDFLSL-L------KEWAKLCQYFSIYDTDKVPEQ---SLNFMSEDE 375 (433)
Q Consensus 334 ----------------------------~~~di~d~~~l-l------~~~~~PCQ~fS~ag~~~~~~d---~r~~L~~~~ 375 (433)
..+||.++... + -..++|||+||.+|++++..| +|+.|+.++
T Consensus 82 ~~~~~~~i~~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~fS~ag~~~g~~d~~~~r~~L~~~~ 161 (403)
T 4dkj_A 82 MPISEYGIKKINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDLSVQGLQKGIDKELNTRSGLLWEI 161 (403)
T ss_dssp SCCCHHHHHHHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTTCTTSCCCCCCGGGCCSGGGHHHH
T ss_pred ccccccccccccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCHHHhCCCCCCCccccccchhHHHH
Confidence 23666655321 1 123579999999999888776 899999999
Q ss_pred HhcccccCC-CCCCCCCcEEEEeccccccccCCCC------CCCCCceEEEEEEEeee-eecee
Q 013949 376 EEEEEEEND-DDSNVPNEEFEVESLTAVCYGDPNK------TKKPGVYFKECCLIICY-LTFVP 431 (433)
Q Consensus 376 ~~~~~~~~~-~i~~~~P~~fvvENV~gi~~~~p~~------~~~~gl~~~v~w~~~~~-~~~~p 431 (433)
+++++++.. .+...+|++|++|||+||+..+... .....+||.|.|..++- ++++|
T Consensus 162 ~rii~~~~~k~~~~~~Pk~~l~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvP 225 (403)
T 4dkj_A 162 ERILEEIKNSFSKEEMPKYLLMENVKNLLSHKNKKNYNTWLKQLEKFGYKSKTYLLNSKNFDNC 225 (403)
T ss_dssp HHHHHHHHHHSCGGGSCSEEEEEEEGGGGSHHHHHHHHHHHHHHHHTTEEEEEEEEEGGGTTCS
T ss_pred HHHHHHhhhhhccccCCCEEEEecchhhhhhccchHHHHHHHHHHhCCCeEEEEEecHHHcCCC
Confidence 999322100 0122899999999999998533221 12257899999999955 55588
No 16
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=99.80 E-value=1.4e-18 Score=156.07 Aligned_cols=127 Identities=16% Similarity=0.347 Sum_probs=103.5
Q ss_pred ceeEEEE--CC---EEEeeCCEEEEEeCCCCccEEEEEEEEeec---CCCceEEEEEEeeeccccccccc---cCCCCCc
Q 013949 124 HYTQASV--DG---CLYNLGDDAYVKAEEGAVDYIARIVELFES---VDGEPYFKARWFYRAEDTVIKDL---AYLVDRK 192 (433)
Q Consensus 124 ~Y~~~~v--dG---~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~---~dg~~~v~VrWFyRpeDtv~~~~---~~~~d~r 192 (433)
+|+++.+ .| .++++||||+|.+++...+|||+|++|+++ ....+.++||||+|+++++.+.. ....+.+
T Consensus 23 ~Y~~~~v~~~~~~~~~i~vGd~VLI~~~D~~~PyVAki~~lye~~~e~~~~k~A~VQWy~R~~EiP~~k~~l~g~~~~~q 102 (163)
T 4dov_A 23 MYREICMKINDGSEIHIKVGQFVLIQGEDNKKPYVAKLIELFQNGAEVPPKKCARVQWFVRFLEIPVSKRHLLGRSPPAQ 102 (163)
T ss_dssp EESEEEEECTTSCEEEEETTCEEEECCSSSSCCEEEEEEEEEEETTSSSCEEEEEEEEEEEGGGSCTTTGGGGCSCCCTT
T ss_pred eeeEEEEecCCCCCeEEeeCCEEEEeCCcccCChhHHHHHHHhccccCCCceEEEEEeeechhhccccchhhccCCCCCC
Confidence 8899988 56 899999999999996555599999999985 33578899999999999966543 2335789
Q ss_pred eeEeeCCcc---cccccceeeeeEEEeeCcccchhhhccCCCCceEEEeeeccCCCceeEcCCCC
Q 013949 193 RVFLSDVED---DNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNINNE 254 (433)
Q Consensus 193 ELF~S~~~d---~~pl~~I~gKC~V~~~~~~~~~~~~~~~~~~~~ffy~~~Y~~~~~tF~~lp~e 254 (433)
|||++++.+ ++++++|.|+|.|+.+.+...++.. ......||.+.+||- +.|..|+++
T Consensus 103 EIF~~d~~~~d~~I~aeTIi~~c~V~~~~~~e~~p~~--~~~e~t~FvklsWd~--k~f~pl~~~ 163 (163)
T 4dov_A 103 EIFWYDCSDWDNKINVETIIGPVQVVALAPEEVIPVD--QKSEETLFVKLSWNK--KDFAPLPPE 163 (163)
T ss_dssp EEEEECCSCSCCEEEGGGEEEEEEEEECCTTCCCCSS--CCCCSEEEEEEEECS--SCEEECC--
T ss_pred eEEEecCCCCcccccHHHeeeceEEEEcCCccccCCC--cccceEEEEEEEecC--CcceeCCCC
Confidence 999999874 8899999999999999887666432 344689999999977 799999864
No 17
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.62 E-value=3.5e-17 Score=155.69 Aligned_cols=91 Identities=8% Similarity=-0.103 Sum_probs=67.8
Q ss_pred CCCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHh-c--------CcC
Q 013949 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL-L--------KEW 348 (433)
Q Consensus 278 ~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~l-l--------~~~ 348 (433)
+..++++|||||+|| || +.+||++ +.|||+..++++||.++... + -..
T Consensus 31 ~~~~~vidLFaGig~---Gl----~~aGf~~----------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliG 87 (230)
T 2qrv_B 31 RQPVRVLSLFEDIKK---EL----TSLGFLE----------------SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYG 87 (230)
T ss_dssp CCCCCEEEESSCCTT---TT----TTTTSCC---------------------CCEEEESCCTTCCHHHHHHTCCCSEEEE
T ss_pred cCCceEEEeccChhH---HH----HHCCCch----------------hhcCCCCcEecCChhhCCHhHhcccCCCCEEEE
Confidence 356899999999987 77 8899984 47998877788999876321 1 123
Q ss_pred CCCCchhhcccCCCCCCcccCchHHHHHhcccccCCCCCCCCCc-------EEEEecccccccc
Q 013949 349 AKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNE-------EFEVESLTAVCYG 405 (433)
Q Consensus 349 ~~PCQ~fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~P~-------~fvvENV~gi~~~ 405 (433)
++|||+||.+| +|+.|+.+++++ ++..+|+ +|++|||+||+..
T Consensus 88 G~PCQ~FS~ag-------~rg~Lf~ef~Ri-------v~~~rPk~~~~~P~~fv~ENV~gL~~~ 137 (230)
T 2qrv_B 88 ATPPLGHTCDR-------PPSWYLFQFHRL-------LQYARPKPGSPRPFFWMFVDNLVLNKE 137 (230)
T ss_dssp ECCCTTTSSCS-------CTHHHHHHHHHH-------HHHHCCCSSCCSCCEEEEEECSCSCHH
T ss_pred CCCCCcccccC-------CCchHHHHHHHH-------HHHHCcCcccCCCcEEEEeccHHhhhc
Confidence 57999999988 368999999999 5666665 8999999999754
No 18
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.53 E-value=9.6e-16 Score=155.26 Aligned_cols=121 Identities=7% Similarity=-0.146 Sum_probs=82.1
Q ss_pred CCCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHHHh-c--------CcC
Q 013949 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSL-L--------KEW 348 (433)
Q Consensus 278 ~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~~l-l--------~~~ 348 (433)
+.++++||||||+|| || +.+||++ ++|||+..++.+||.++... + ...
T Consensus 187 ~~~ikvidLFaGiGg---Gl----~~aGf~v----------------~~N~~~~~~~~~DI~~i~~~~i~~~~~~DlliG 243 (386)
T 2pv0_B 187 RQPVRVLSLFEDIKK---EL----TSLGFLE----------------SGSDPGQLKHVVDVTDTVRKDVEEWGPFDLVYG 243 (386)
T ss_dssp CCCCCEEEESSCCHH---HH----HHTTSSC----------------SSCCSCSEEEESCCTTCCHHHHHHSCCCSEEEE
T ss_pred hcCceeeEEeccCCh---hH----hhcCccH----------------HHcCCCCcEEeCChhhCCHhHhcccCCCCEEEE
Confidence 457899999999997 77 8899984 58999877788999866321 1 123
Q ss_pred CCCCchhhcccCCCCCCcccCchHHHHHhcccccCCCCCCCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEeee-e
Q 013949 349 AKLCQYFSIYDTDKVPEQSLNFMSEDEEEEEEEENDDDSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIICY-L 427 (433)
Q Consensus 349 ~~PCQ~fS~ag~~~~~~d~r~~L~~~~~~~~~~~~~~i~~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~~-~ 427 (433)
++|||+||.|| +|+.||.+|++++++.......-+|.+|++|||+||...+...+ ..- +++.|+.|+- +
T Consensus 244 G~PCQ~FS~A~-------~Rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~~~i-~~~--L~v~~~VLnA~d 313 (386)
T 2pv0_B 244 ATPPLGHTCDR-------PPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDLDVA-SRF--LEMEPVTIPDVH 313 (386)
T ss_dssp ECCCTTTCSCS-------CTHHHHHHHHHHHHHHSCCSSCCSCCEEEEEECSCSCHHHHHHH-HHH--TTSCCCEEECCC
T ss_pred CCCCCcccccC-------CcchHHHHHHHHHHHhCCCcccCCCcEEEEEechhhhhcchHHH-HHH--HcCCeEEEEccc
Confidence 57999999986 47899999999943322222222334999999999964321110 111 1257888854 4
Q ss_pred ecee
Q 013949 428 TFVP 431 (433)
Q Consensus 428 ~~~p 431 (433)
+++|
T Consensus 314 yGVP 317 (386)
T 2pv0_B 314 GGSL 317 (386)
T ss_dssp SSSC
T ss_pred cCcc
Confidence 5576
No 19
>2fl7_A Regulatory protein SIR3; ORC, silencing, chromatin, transcription; 1.85A {Saccharomyces cerevisiae} PDB: 2fvu_A 3tu4_K*
Probab=98.94 E-value=3.2e-09 Score=100.61 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=89.5
Q ss_pred ECCEEEeeCCEEEEEeCCCCccEEEEEEEEeecC-CCceEEEEEEeeeccccccc------ccc--------CC------
Q 013949 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESV-DGEPYFKARWFYRAEDTVIK------DLA--------YL------ 188 (433)
Q Consensus 130 vdG~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~-dg~~~v~VrWFyRpeDtv~~------~~~--------~~------ 188 (433)
.||++|++||+|.|+.+..+-+.++-|.+|--.. +.-..+.|.||+|..|+... .+. ..
T Consensus 48 ~Dg~~~~~GDsVlv~~~~~~sysv~LI~eIrl~t~~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 127 (232)
T 2fl7_A 48 SDGLSFGKGESVIFNDNVTETYSVYLIHEIRLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFF 127 (232)
T ss_dssp TTCCEECTTCEEEEEETTTTEEEEEEEEEEEC-----CCEEEEEEEECGGGSCHHHHHHHHCHHHHHTTCCHHHHHHHHH
T ss_pred cCCcEEeCCCEEEEecCCCCceEEEEEEEEEecCCCceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhh
Confidence 3899999999999998755556677777764332 44688999999999998431 111 12
Q ss_pred --CCCceeEeeCCcccccccceeeeeEEEeeCcccchhhhccCCCCceEEEeeeccCCCceeEcCC
Q 013949 189 --VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNIN 252 (433)
Q Consensus 189 --~d~rELF~S~~~d~~pl~~I~gKC~V~~~~~~~~~~~~~~~~~~~~ffy~~~Y~~~~~tF~~lp 252 (433)
...+|||+|.+.+.+-+.+|+++|+|+...+..++.. +....++||++..+++....|..+.
T Consensus 128 ~~~~~nELflTa~l~eI~l~diI~~anVls~~Ef~~l~~--d~~~~~tFf~R~~cd~~~~~f~~iD 191 (232)
T 2fl7_A 128 NEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSI--DKIEDRDFLVRYACEPTAEKFVPID 191 (232)
T ss_dssp HHSCTTEEEEEEEEEEECGGGEEEECEEECTTTC---------CTTTEEEEEEECCTTSCSCEECC
T ss_pred cccccceEEEeccHHHHHHHhhhhheEeccHHHHHHhcc--cccCCceEEEEEEEcCCcCcccccc
Confidence 6899999999999999999999999999997655422 2344699999999999777787553
No 20
>1m4z_A Origin recognition complex subunit 1; DNA replication, transcriptional silencing, chromatin, BAH D gene regulation; 2.20A {Saccharomyces cerevisiae} SCOP: b.34.12.1 PDB: 1zhi_A 1zbx_A
Probab=98.93 E-value=3.2e-09 Score=100.98 Aligned_cols=121 Identities=16% Similarity=0.110 Sum_probs=93.6
Q ss_pred ECCEEEeeCCEEEEEeCCCCccEEEEEEEEee-cCCCceEEEEEEeeeccccccc------ccc--------CC------
Q 013949 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFE-SVDGEPYFKARWFYRAEDTVIK------DLA--------YL------ 188 (433)
Q Consensus 130 vdG~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e-~~dg~~~v~VrWFyRpeDtv~~------~~~--------~~------ 188 (433)
.||++|++||+|.|+.+..+-+.++-|.+|-- +.+.-..+.|.||+|..|+... .+. ..
T Consensus 48 ~Dg~~~~~GDsVlv~~~~~~sysv~LI~eIrl~t~~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 127 (238)
T 1m4z_A 48 SDGIKLGRGDSVVMHNEAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYNKLFS 127 (238)
T ss_dssp TTCCEECTTCEEEEEETTTTEEEEEEEEEEEEETTTTEEEEEEEEEECGGGSCHHHHHHHHCHHHHHSCCCHHHHHHHHH
T ss_pred cCCcEEeCCCEEEEecCCCCceEEEEEEEEEecCCCceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhh
Confidence 38999999999999987555566677777643 3245678899999999998431 111 12
Q ss_pred --CCCceeEeeCCcccccccceeeeeEEEeeCcccchhhhccCCCCceEEEeeeccCCCceeEcCC
Q 013949 189 --VDRKRVFLSDVEDDNPLNCIVSKAKIAEVAANMDLEAKQKNIPPCDLYYDMKYTLPHLTFSNIN 252 (433)
Q Consensus 189 --~d~rELF~S~~~d~~pl~~I~gKC~V~~~~~~~~~~~~~~~~~~~~ffy~~~Y~~~~~tF~~lp 252 (433)
...+|||+|.+.+.+-+.+|+++|+|+...+..++.. .....++||++..+++....|..+.
T Consensus 128 ~~~~~nELflTa~l~eI~l~diI~~anVls~~Ef~~i~~--d~~~~~tFf~R~~cd~~~~~f~~iD 191 (238)
T 1m4z_A 128 ETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKG--NVDPERDFTVRYICEPTGEKFVDIN 191 (238)
T ss_dssp HHSCTTEEEEEEEEEEECGGGEEEEEEEECHHHHHHHGG--GCCTTTEEEEEEECCTTSCCCEECC
T ss_pred cccccceEEEeccHHHHhHHhhhhheEeccHHHHhhhcc--ccccCceEEEEEEEcCCcCcccccc
Confidence 6899999999999999999999999999987555422 2355799999999999777787543
No 21
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.64 E-value=0.0016 Score=59.38 Aligned_cols=57 Identities=23% Similarity=0.247 Sum_probs=45.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~ 342 (433)
..++|||+||.|.+++.+ ...|..- +.++|+++.+++..+.|. +++.+++.|+.+++
T Consensus 55 ~~~vLDlgcG~G~~~~~l----~~~~~~~--V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEA----LSRYAAG--ATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL 116 (202)
T ss_dssp TCEEEETTCTTCHHHHHH----HHTTCSE--EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred CCeEEEeCCCcCHHHHHH----HhcCCCE--EEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH
Confidence 458999999999999875 3345432 579999999999998875 35678899998875
No 22
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.60 E-value=0.00093 Score=65.11 Aligned_cols=56 Identities=27% Similarity=0.367 Sum_probs=43.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~ 342 (433)
.-++||+|||.|++++-+ ...| .+ ++|+|+|+.|.+..+.|.- ...++++|+.+|.
T Consensus 126 g~~VlD~~aG~G~~~i~~----a~~g~~~---V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~ 188 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPI----AVYGKAK---VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp TCEEEETTCTTTTTTHHH----HHHTCCE---EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred CCEEEEecCcCcHHHHHH----HHhcCCe---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc
Confidence 458999999999999865 3334 34 5899999999999998842 2468889988764
No 23
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.57 E-value=0.002 Score=58.66 Aligned_cols=57 Identities=23% Similarity=0.314 Sum_probs=44.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-------CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-------PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-------p~~~v~~~di~d~~ 342 (433)
..++|||+||.|+++..+ ...|.. .+.++|+++.+++..+.|. +++.+++.|+.++.
T Consensus 54 ~~~vLDlGcGtG~~~~~~----~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEA----LSRQAK--KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL 117 (201)
T ss_dssp TCEEEETTCTTCHHHHHH----HHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT
T ss_pred CCeEEEcCCccCHHHHHH----HHccCC--EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH
Confidence 458999999999999875 334543 2579999999999988874 35678889988765
No 24
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.56 E-value=0.0024 Score=56.99 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=46.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ 343 (433)
..-++|||+||.|+++..+ ...|..- +.++|+++.+++..+.|. ++..++++|+.++..
T Consensus 44 ~~~~vLDlgcG~G~~~~~~----~~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 107 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEA----LSRGAAS--VLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVA 107 (189)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCSE--EEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHH----HHCCCCe--EEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHh
Confidence 3458999999999999866 3345542 579999999999988875 356789999998864
No 25
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.55 E-value=0.0026 Score=57.23 Aligned_cols=56 Identities=25% Similarity=0.301 Sum_probs=47.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
..++||++||.|+++..+ ...|..- +.++|+++.+++..+.|.++..+++.|+.++
T Consensus 52 ~~~vlD~gcG~G~~~~~l----~~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~ 107 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGS----YLLGAES--VTAFDIDPDAIETAKRNCGGVNFMVADVSEI 107 (200)
T ss_dssp TSEEEEETCTTCHHHHHH----HHTTBSE--EEEEESCHHHHHHHHHHCTTSEEEECCGGGC
T ss_pred CCEEEEEeCCccHHHHHH----HHcCCCE--EEEEECCHHHHHHHHHhcCCCEEEECcHHHC
Confidence 458999999999999887 3446542 5799999999999999998788999999875
No 26
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.45 E-value=0.0018 Score=64.39 Aligned_cols=57 Identities=21% Similarity=0.211 Sum_probs=46.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----C--CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----P--ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p--~~~v~~~di~d~~~ 343 (433)
..++||||||.|++++.+ ...|.. +.+||+++.|++..+.|. . ...++++|+.+++.
T Consensus 154 ~~~VLDlgcGtG~~sl~l----a~~ga~---V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~ 217 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVA----AAAGAE---VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQ 217 (332)
T ss_dssp CCEEEEETCTTCHHHHHH----HHTTCE---EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHH
T ss_pred CCcEEEcccccCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHH
Confidence 458999999999999987 456775 579999999999998874 2 25789999988764
No 27
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.45 E-value=0.0017 Score=65.72 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=46.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------C-CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------P-ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p-~~~v~~~di~d~~~ 343 (433)
.-++||||||+|++++.+ ...|..- +.++|+++.|++..+.|. + +..++++|+.+++.
T Consensus 221 ~~~VLDl~cG~G~~sl~l----a~~g~~~--V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~ 285 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSA----LMGGCSQ--VVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLR 285 (396)
T ss_dssp TCEEEEESCTTCSHHHHH----HHTTCSE--EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHH
T ss_pred CCeEEEeeccCCHHHHHH----HHCCCCE--EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHH
Confidence 458999999999999987 4456432 689999999999988874 2 45788999988764
No 28
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.32 E-value=0.0038 Score=56.23 Aligned_cols=56 Identities=27% Similarity=0.303 Sum_probs=45.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~ 341 (433)
.-++||++||.|+++..+ ...|.. .+.++|+++.+++..+.|.. +..++++|+.++
T Consensus 50 ~~~vlD~g~G~G~~~~~l----~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 109 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGA----LLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF 109 (207)
T ss_dssp TCEEEEETCTTCHHHHHH----HHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC
T ss_pred cCEEEEeeCCCCHHHHHH----HHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc
Confidence 458999999999999887 444654 25799999999999999875 457888998875
No 29
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.21 E-value=0.0039 Score=57.62 Aligned_cols=73 Identities=18% Similarity=0.129 Sum_probs=54.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHHhc-C---cC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLSLL-K---EW 348 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ll-~---~~ 348 (433)
...++||++||.|+++..| ...|.. +.++|+++.+++..+.|. ++..+++.|+.++.... . -.
T Consensus 78 ~~~~vLD~gcG~G~~~~~l----a~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQF----ALTGMR---VIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEE
Confidence 3568999999999999988 456755 479999999999888875 35678899998875210 0 12
Q ss_pred CCCCchhhcc
Q 013949 349 AKLCQYFSIY 358 (433)
Q Consensus 349 ~~PCQ~fS~a 358 (433)
.+||..+...
T Consensus 151 ~~~~~~~~~~ 160 (241)
T 3gdh_A 151 SPPWGGPDYA 160 (241)
T ss_dssp CCCCSSGGGG
T ss_pred CCCcCCcchh
Confidence 3577766543
No 30
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=96.20 E-value=0.0036 Score=62.76 Aligned_cols=56 Identities=25% Similarity=0.367 Sum_probs=44.4
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLS 343 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ 343 (433)
-++||||||+|++++-| ...+-. +.++|+++.|++..+.|. +++.++++|+.++..
T Consensus 215 ~~vLDl~cG~G~~~l~l----a~~~~~---V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLAL----ARNFDR---VLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp SEEEEESCTTSHHHHHH----GGGSSE---EEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred CEEEEccCCCCHHHHHH----HhcCCE---EEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 47999999999999977 222333 579999999999988774 356788999988864
No 31
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=96.03 E-value=0.0065 Score=61.97 Aligned_cols=60 Identities=25% Similarity=0.247 Sum_probs=46.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-----C--CceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-----E--TKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-----~--~~v~~~di~d~~~ 343 (433)
..++||||||.|++++-+ +.+..|..- +++||+++.|++..+.|.. + +.++++|+.+++.
T Consensus 53 g~~VLDlfaGtG~~sl~a--a~~~~ga~~--V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~ 119 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRF--LLETSCVEK--AYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLR 119 (392)
T ss_dssp CEEEEESSCTTSHHHHHH--HHHCSCEEE--EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHH
T ss_pred CCEEEECCCcccHHHHHH--HHhCCCCCE--EEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHH
Confidence 468999999999999855 112245442 6899999999999988742 3 6788999988875
No 32
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.00 E-value=0.0071 Score=52.20 Aligned_cols=56 Identities=25% Similarity=0.351 Sum_probs=46.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~ 342 (433)
.-++||+.||.|.++..+ ...|.. +.++|+++.+++..+.|.. +..+++.|+.++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l----~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 101 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEA----ASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFL 101 (171)
T ss_dssp CCEEEEETCSSCHHHHHH----HHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHH
T ss_pred CCeEEEeCCCcCHHHHHH----HHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHH
Confidence 458999999999999887 556766 4799999999998888754 5688999998864
No 33
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=95.92 E-value=0.0048 Score=62.40 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=45.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----C--CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----P--ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p--~~~v~~~di~d~~~ 343 (433)
.-++||||||.|++++-+ ...|..- +.++|+++.|++..+.|. . +..++++|+.+++.
T Consensus 213 ~~~VLDl~cGtG~~sl~l----a~~ga~~--V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~ 277 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAA----AMGGAMA--TTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFK 277 (385)
T ss_dssp TCEEEEETCTTTHHHHHH----HHTTBSE--EEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHH
T ss_pred CCeEEEEeeccCHHHHHH----HHCCCCE--EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHH
Confidence 458999999999999877 4446532 579999999999888774 2 45789999988754
No 34
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=95.81 E-value=0.0086 Score=52.49 Aligned_cols=59 Identities=17% Similarity=0.226 Sum_probs=45.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
..-++||++||.|.++..+ ...|.. .+.++|+++.+++..+.|. +...+++.|+.++..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l----~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEA----VSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID 95 (177)
T ss_dssp CSCEEEEETCTTCHHHHHH----HHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHH----HHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH
Confidence 3458999999999999877 334542 2589999999999988875 235688899988654
No 35
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.73 E-value=0.0067 Score=58.24 Aligned_cols=57 Identities=25% Similarity=0.343 Sum_probs=44.1
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-----C-CceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-----E-TKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-----~-~~v~~~di~d~~ 342 (433)
.-++||+|||.|++++.+ ...|.. .+.++|+++.|++..+.|.. + ..++++|+.++.
T Consensus 126 ~~~VLDlgcG~G~~~~~l----a~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPI----AVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp TCEEEETTCTTTTTHHHH----HHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred CCEEEEecccCCHHHHHH----HHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 458999999999999887 444554 25899999999999888732 2 457888887765
No 36
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=95.72 E-value=0.0084 Score=52.63 Aligned_cols=59 Identities=31% Similarity=0.325 Sum_probs=45.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
..-++||++||.|+++..+ ...|.. .+.++|+++.+++..+.|. ++..+++.|+.++..
T Consensus 44 ~~~~vLD~GcG~G~~~~~~----~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEA----VSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp SSCEEEETTCTTCHHHHHH----HHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHH----HHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 3458999999999999876 334532 2579999999998888775 346788999988653
No 37
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.68 E-value=0.0079 Score=60.65 Aligned_cols=59 Identities=22% Similarity=0.281 Sum_probs=46.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
..-++||||||.|++++-+ ...|..- +.++|+++.|++..+.|.. +..+++.|+.+++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~l----a~~g~~~--v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~ 281 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHA----AIAGADE--VIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEME 281 (396)
T ss_dssp TTCEEEETTCTTTHHHHHH----HHTTCSE--EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHH----HHCCCCE--EEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHH
Confidence 3458999999999999987 3346532 5899999999988887752 45788999988754
No 38
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.52 E-value=0.014 Score=59.36 Aligned_cols=58 Identities=22% Similarity=0.195 Sum_probs=46.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhHHHh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDFLSL 344 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~~~l 344 (433)
.-++||||||.|++++-+ ...|.. +.++|+++.|++..+.|. -...+.++|+.+++..
T Consensus 215 g~~VLDlg~GtG~~sl~~----a~~ga~---V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~ 276 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRA----ARKGAY---ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRG 276 (393)
T ss_dssp TCEEEEESCTTTHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHT
T ss_pred CCeEEEcccchhHHHHHH----HHcCCe---EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHH
Confidence 568999999999999977 445766 479999999999888774 2235778999887643
No 39
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.48 E-value=0.011 Score=56.66 Aligned_cols=56 Identities=23% Similarity=0.253 Sum_probs=43.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
.-++||||||.|++++-+. ...+ .. ++++|+++.|++..+.|. ++..++++|+.++
T Consensus 120 ~~~VLDlgcG~G~~s~~la---~~~~~~~---V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~ 181 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLA---KYSKPKL---VYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV 181 (272)
T ss_dssp TCEEEETTCTTTTTHHHHH---HHTCCSE---EEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred CCEEEEecCcCCHHHHHHH---HhCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc
Confidence 4589999999999998772 3322 24 589999999999888774 3557888999876
No 40
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=95.38 E-value=0.011 Score=60.51 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=45.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-------CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-------ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-------~~~v~~~di~d~~ 342 (433)
.-++||||||.|++++.| ...|.. +.+||+++.+++..+.|.. ++.++++|+.+++
T Consensus 94 g~~VLDLgcG~G~~al~L----A~~g~~---V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L 156 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIAL----MSKASQ---GIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYL 156 (410)
T ss_dssp TCEEEESSCSSSHHHHHH----HTTCSE---EEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSH
T ss_pred CCEEEEeCCCchHHHHHH----HhcCCE---EEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhh
Confidence 358999999999999877 445666 4799999999999988853 3578999998864
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=95.36 E-value=0.02 Score=50.41 Aligned_cols=57 Identities=18% Similarity=0.142 Sum_probs=44.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~ 342 (433)
...++||+.||.|.++.-| ...|.+ +.++|+++.+++..+.|. ++..+++.++.++.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l----a~~~~~---v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~ 83 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFL----AGLSKK---VYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD 83 (185)
T ss_dssp TTCEEEESCCTTSHHHHHH----HTTSSE---EEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG
T ss_pred CCCEEEEEcCCCCHHHHHH----HHhCCE---EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH
Confidence 3458999999999999987 334666 479999999988887765 45677777777764
No 42
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.34 E-value=0.022 Score=50.90 Aligned_cols=56 Identities=18% Similarity=0.243 Sum_probs=48.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
..++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.++++..+++.|+.++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHL----ASLGHQ---IEGLEPATRLVELARQTHPSVTFHHGTITDLS 97 (203)
T ss_dssp CSCEEEETCTTCHHHHHH----HHTTCC---EEEECCCHHHHHHHHHHCTTSEEECCCGGGGG
T ss_pred CCeEEEecCCCCHHHHHH----HhcCCe---EEEEeCCHHHHHHHHHhCCCCeEEeCcccccc
Confidence 569999999999999877 445776 47999999999999999999999999998764
No 43
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.29 E-value=0.021 Score=57.80 Aligned_cols=58 Identities=21% Similarity=0.271 Sum_probs=44.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcC--------------------CCCceeecCh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNH--------------------PETKVRNEAA 338 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~--------------------p~~~v~~~di 338 (433)
..++||||||+|++++.+ +...| .. ++++|+++.|++..+.|. .++.++++|+
T Consensus 48 ~~~VLDl~aGtG~~~l~~---a~~~~~~~---V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da 121 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRF---ALETPAEE---VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDA 121 (378)
T ss_dssp CSEEEESSCTTSHHHHHH---HHHSSCSE---EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCH
T ss_pred CCEEEECCCchhHHHHHH---HHhCCCCe---EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcH
Confidence 458999999999999876 23333 44 589999999999988763 1256888999
Q ss_pred hhHHH
Q 013949 339 DDFLS 343 (433)
Q Consensus 339 ~d~~~ 343 (433)
.++..
T Consensus 122 ~~~~~ 126 (378)
T 2dul_A 122 NRLMA 126 (378)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 44
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.28 E-value=0.025 Score=49.40 Aligned_cols=56 Identities=21% Similarity=0.181 Sum_probs=47.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++..| ...|.+ +.++|+++.+++..+.|.++..+++.|+.++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l----~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~ 101 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYL----SKQGHD---VLGTDLDPILIDYAKQDFPEARWVVGDLSVD 101 (195)
T ss_dssp TTCEEEEETCTTTHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHCTTSEEEECCTTTS
T ss_pred CCCeEEEECCCCCHHHHHH----HHCCCc---EEEEcCCHHHHHHHHHhCCCCcEEEcccccC
Confidence 3559999999999999887 444776 4799999999999999999888888888764
No 45
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.27 E-value=0.027 Score=53.74 Aligned_cols=76 Identities=22% Similarity=0.195 Sum_probs=50.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHc-----CCCCceeecChhhHHHhc----Cc-
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFN-----HPETKVRNEAADDFLSLL----KE- 347 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N-----~p~~~v~~~di~d~~~ll----~~- 347 (433)
...++||++||.||.++-|.. ...| .. ++|+|+++.+++..+.| .+++.+++.|+.++...+ ..
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~--~~~~~~~---v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQ--LMKNKGT---IVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHH--HTTTCSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CcCEEEEeCCCccHHHHHHHH--HcCCCCE---EEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccC
Confidence 345899999999999987721 2234 34 57999999999998887 345678899998876421 11
Q ss_pred ----CCCCCchhhccc
Q 013949 348 ----WAKLCQYFSIYD 359 (433)
Q Consensus 348 ----~~~PCQ~fS~ag 359 (433)
...||.++....
T Consensus 158 D~Vl~d~Pcs~~g~~~ 173 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKD 173 (274)
T ss_dssp EEEEEEECCC------
T ss_pred CEEEEcCCCCCCcccc
Confidence 235998765543
No 46
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.20 E-value=0.011 Score=58.57 Aligned_cols=55 Identities=31% Similarity=0.454 Sum_probs=42.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~ 342 (433)
.-++||||||.|++++- . . .+.. ++++|+++.|++..+.|. +...++++|+.++.
T Consensus 196 ~~~VLDlg~G~G~~~l~-a---~-~~~~---V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-C---K-NAKK---IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD 256 (336)
T ss_dssp TCEEEETTCTTSHHHHH-T---T-TSSE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred CCEEEEccCccCHHHHh-c---c-CCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc
Confidence 45899999999999874 2 3 2334 589999999999998883 34578889988764
No 47
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.14 E-value=0.016 Score=63.18 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=46.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-------CCCceeecChhhHHHh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-------PETKVRNEAADDFLSL 344 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-------p~~~v~~~di~d~~~l 344 (433)
.-++||||||.|++++.+ ...|..- +.+||+++.|++..+.|. ....++++|+.+++..
T Consensus 540 g~~VLDlg~GtG~~sl~a----a~~ga~~--V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~ 605 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHA----GLGGARS--TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE 605 (703)
T ss_dssp TCEEEEESCTTCHHHHHH----HHTTCSE--EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH
T ss_pred CCcEEEeeechhHHHHHH----HHCCCCE--EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh
Confidence 458999999999999876 4456652 579999999999988874 1357889999987653
No 48
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=95.12 E-value=0.036 Score=57.66 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=54.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHHHhcCc------
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFLSLLKE------ 347 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~~ll~~------ 347 (433)
...+||||+||.||.++-|.. ...+ -. +.|+|+++.+++..+.|.. .+.+++.|+.++......
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~--~~~~~g~---V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAA--RMGGKGL---LLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--HTTTCSE---EEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEE
Confidence 456999999999999998721 2221 24 5799999999999988732 267889999887642211
Q ss_pred CCCCCchhhccc
Q 013949 348 WAKLCQYFSIYD 359 (433)
Q Consensus 348 ~~~PCQ~fS~ag 359 (433)
...||.+.....
T Consensus 176 ~D~PcSg~G~~r 187 (464)
T 3m6w_A 176 LDAPCSGEGMFR 187 (464)
T ss_dssp EECCCCCGGGTT
T ss_pred ECCCcCCccccc
Confidence 246998776544
No 49
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.07 E-value=0.016 Score=58.16 Aligned_cols=57 Identities=23% Similarity=0.173 Sum_probs=44.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ 343 (433)
.-++||+|||.|++++-+. .. +.+ +.++|+++.|++..+.|. +++.++++|+.+++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la---~~-~~~---v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~ 271 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLA---LG-FRE---VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLR 271 (382)
T ss_dssp EEEEEEETCTTTHHHHHHH---HH-EEE---EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHH
T ss_pred CCeEEEeeeccCHHHHHHH---Hh-CCE---EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHH
Confidence 4589999999999999872 22 333 689999999999888873 346789999988764
No 50
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.05 E-value=0.014 Score=57.32 Aligned_cols=76 Identities=14% Similarity=0.101 Sum_probs=50.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHHhc---C---
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLSLL---K--- 346 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ll---~--- 346 (433)
..-++||++||.||.++-|.. ...+ -. ++|+|+++.+++..+.|. .++.+++.|+.++.... .
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~--~~~~~g~---V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAA--LLKNQGK---IFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--HHTTCSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCEEEEeCCChhHHHHHHHH--HhCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCC
Confidence 445899999999999998721 2122 33 579999999999998874 34578888887764221 1
Q ss_pred --cCCCCCchhhccc
Q 013949 347 --EWAKLCQYFSIYD 359 (433)
Q Consensus 347 --~~~~PCQ~fS~ag 359 (433)
....||.++-...
T Consensus 177 ~Vl~D~PcSg~G~~~ 191 (309)
T 2b9e_A 177 YILLDPSCSGSGMPS 191 (309)
T ss_dssp EEEECCCCCC-----
T ss_pred EEEEcCCcCCCCCCc
Confidence 1356998776544
No 51
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=94.99 E-value=0.034 Score=54.54 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=46.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~~~ 343 (433)
..-++||++||.||++..+. ... +.. +.++|+|+.|++..+.|. +...++++|..++..
T Consensus 26 ~g~~vLD~g~G~G~~s~~la---~~~~~~~---VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~ 89 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAIL---EHCPGCR---IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF 89 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHH---HHCTTCE---EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH
T ss_pred CCCEEEEEeCCcCHHHHHHH---HHCCCCE---EEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHH
Confidence 34589999999999999872 332 445 579999999999998876 345788999988753
No 52
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=94.92 E-value=0.025 Score=54.05 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=45.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCH-------hhHHHHHHcC-----CC-CceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINP-------HACKSLKFNH-----PE-TKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~-------~A~~t~~~N~-----p~-~~v~~~di~d~~~ 343 (433)
..++||++||.|.+++-| ...|.. +.++|+++ .+++..+.|. .+ +.++++|+.+++.
T Consensus 84 ~~~VLDlgcG~G~~a~~l----A~~g~~---V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVL----ASLGLT---VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp CCCEEETTCTTCHHHHHH----HHTTCC---EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred cCeEEEeeCccCHHHHHH----HHhCCE---EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 358999999999999877 334666 47999999 9888887763 23 6789999998754
No 53
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.81 E-value=0.021 Score=53.76 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=45.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d~~ 342 (433)
..-++||+.||.|.++..| ...|.+ +.++|+|+.+++..+.|.. +..++++|+.++.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l----~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLEL----VQRCNF---VTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFK 89 (244)
T ss_dssp TTCEEEEECCTTSHHHHHH----HHHSSE---EEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCC
T ss_pred CCCEEEEEeCCchHHHHHH----HHcCCe---EEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCC
Confidence 3458999999999999987 344545 5799999999999998873 5678888887654
No 54
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=94.77 E-value=0.041 Score=57.09 Aligned_cols=76 Identities=24% Similarity=0.280 Sum_probs=54.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHHhcC------
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLSLLK------ 346 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ll~------ 346 (433)
...+||||+||.||.++-+.. ...+ -. +.|+|+++.+++..+.|. .++.+++.|+.++.....
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~--~~~~~g~---V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAA--QMKGKGL---LVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--HHTTCSE---EEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHH--HcCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEE
Confidence 456999999999999998721 2222 24 479999999999998874 345788899988764221
Q ss_pred cCCCCCchhhccc
Q 013949 347 EWAKLCQYFSIYD 359 (433)
Q Consensus 347 ~~~~PCQ~fS~ag 359 (433)
....||.+.-...
T Consensus 180 l~DaPCSg~G~~r 192 (456)
T 3m4x_A 180 VVDAPCSGEGMFR 192 (456)
T ss_dssp EEECCCCCGGGTT
T ss_pred EECCCCCCccccc
Confidence 1246998765543
No 55
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=94.68 E-value=0.041 Score=57.39 Aligned_cols=75 Identities=12% Similarity=0.090 Sum_probs=54.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHHhcC-c---
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLSLLK-E--- 347 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ll~-~--- 347 (433)
...+|||++||.||.++-|. ...+ -. +.|+|+++.+++..+.|. +++.+++.|+.++..... .
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA---~~~~~~g~---V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQIS---ARMNNEGA---ILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHH---HHTTTCSE---EEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHH---HhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCE
Confidence 45689999999999999772 3322 34 579999999999998874 456788899988764221 1
Q ss_pred --CCCCCchhhccc
Q 013949 348 --WAKLCQYFSIYD 359 (433)
Q Consensus 348 --~~~PCQ~fS~ag 359 (433)
...||.+.....
T Consensus 191 Il~D~PcSg~G~~~ 204 (479)
T 2frx_A 191 ILLDAPCSGEGVVR 204 (479)
T ss_dssp EEEECCCCCGGGGG
T ss_pred EEECCCcCCccccc
Confidence 246998776544
No 56
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=94.66 E-value=0.042 Score=51.27 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=48.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
..++||+-||.|.++..| ...|.+ +.++|+++.+++..+.+.++..+++.|+.++.
T Consensus 51 ~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHL----ADSFGT---VEGLELSADMLAIARRRNPDAVLHHGDMRDFS 106 (263)
T ss_dssp CCEEEEETCTTSHHHHHH----TTTSSE---EEEEESCHHHHHHHHHHCTTSEEEECCTTTCC
T ss_pred CCcEEEeCCcCCHHHHHH----HHcCCe---EEEEECCHHHHHHHHhhCCCCEEEECChHHCC
Confidence 468999999999999988 555766 47999999999999999998889999988753
No 57
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.63 E-value=0.049 Score=49.90 Aligned_cols=54 Identities=20% Similarity=0.280 Sum_probs=46.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 339 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~ 339 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.|.++..+++.|+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~d~~ 101 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARF----GPQAAR---WAAYDFSPELLKLARANAPHADVYEWNGK 101 (226)
T ss_dssp TTCEEEEESCTTSHHHHHH----GGGSSE---EEEEESCHHHHHHHHHHCTTSEEEECCSC
T ss_pred CCCeEEEeCCCCCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHhCCCceEEEcchh
Confidence 3568999999999999887 444766 47999999999999999998889999885
No 58
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=94.54 E-value=0.029 Score=52.79 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=45.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
...++|||.||+|++++.| ...+-. .+.++|+++.+++..+.|.. .+.+++.|+.++..
T Consensus 49 ~~~~vLDlG~G~G~~~~~l----a~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~ 113 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLL----STRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD 113 (259)
T ss_dssp SCCEEEETTCTTTHHHHHH----HTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG
T ss_pred CCCEEEEcCCchhHHHHHH----HHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh
Confidence 3568999999999999877 333332 25899999999988887742 35788999988764
No 59
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.37 E-value=0.025 Score=52.75 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=43.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc-------------CCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN-------------HPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N-------------~p~~~v~~~di~d~~ 342 (433)
...++||++||.|+++..|.. ...+.. +.++|+++.+++..+.| .++..+++.|+.+++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~--~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l 120 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSP--AFPEDL---ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFL 120 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHH--HSTTSE---EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCG
T ss_pred CCCEEEEEcCCCCHHHHHHHH--hCCCCC---EEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHH
Confidence 346899999999999998721 223445 47999999888766543 356678889988743
No 60
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.36 E-value=0.054 Score=47.65 Aligned_cols=49 Identities=20% Similarity=0.160 Sum_probs=40.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
.-++||+.||.|.++..| ...| . +.++|+++.+++. .++..++++|+.+
T Consensus 24 ~~~vLD~GcG~G~~~~~l----~~~~-~---v~gvD~s~~~~~~----~~~~~~~~~d~~~ 72 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQL----RKRN-T---VVSTDLNIRALES----HRGGNLVRADLLC 72 (170)
T ss_dssp SCEEEEETCTTCHHHHHH----TTTS-E---EEEEESCHHHHHT----CSSSCEEECSTTT
T ss_pred CCeEEEeccCccHHHHHH----HhcC-c---EEEEECCHHHHhc----ccCCeEEECChhh
Confidence 348999999999999987 5556 4 5799999999988 4557788999865
No 61
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.33 E-value=0.018 Score=59.09 Aligned_cols=56 Identities=21% Similarity=0.299 Sum_probs=43.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~ 342 (433)
.-++||||||.|.+++-| ...+.+ +.++|+++.|++..+.|.. ...++++|+.++.
T Consensus 291 ~~~VLDlgcG~G~~sl~l----a~~~~~---V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~ 350 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYL----AKRGFN---VKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS 350 (425)
T ss_dssp SSEEEEETCTTTHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC
T ss_pred CCEEEEeeccchHHHHHH----HHcCCE---EEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcC
Confidence 458999999999999987 334555 5799999999988887753 1578888887764
No 62
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.32 E-value=0.045 Score=49.81 Aligned_cols=57 Identities=19% Similarity=0.237 Sum_probs=44.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----C-CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----P-ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p-~~~v~~~di~d~~ 342 (433)
...++|||.||.|.++.-| ...|.+ ++++|+++.+++..+.|. + +..++++|+.+..
T Consensus 55 ~~~~vLDlGcG~G~~~~~l----a~~~~~---v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEW----CLAGGR---AITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred CCCEEEEecCCCCHHHHHH----HHcCCE---EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 3468999999999999877 333666 479999999998888773 4 4678889988743
No 63
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=94.21 E-value=0.057 Score=46.71 Aligned_cols=55 Identities=22% Similarity=0.238 Sum_probs=44.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d 340 (433)
...++||+.||.|.++..| ...+.+ +.++|+++.+++..+.|. ++..+++.|+.+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l----~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEI----AKRCKF---VYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp TTCEEEEESCCCSHHHHHH----HTTSSE---EEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred CCCEEEEeCCCCCHHHHHH----HhcCCe---EEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 3458999999999999887 335555 479999999998888774 456788899877
No 64
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=94.18 E-value=0.051 Score=48.29 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=44.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
...++||+.||.|.++.-|. ...| .. +.++|+++.+++..+.|. +...+++.|+.++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~---~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 88 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLA---SLVGENGR---VFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK 88 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHH---HHHCTTCE---EEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG
T ss_pred CCCEEEEcCCCCCHHHHHHH---HHhCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh
Confidence 34599999999999998773 2222 24 579999999998888873 346788999887753
No 65
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.12 E-value=0.034 Score=53.17 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=46.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~~ 342 (433)
.-++||+.||.|.++..| ...|.+ +.++|+|+.+++..+.|+ ++..++++|+.++.
T Consensus 30 ~~~VLEIG~G~G~lt~~L----a~~~~~---V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYL----LTECDN---LALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFD 88 (255)
T ss_dssp TCEEEEECCTTTTTHHHH----TTTSSE---EEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCC
T ss_pred cCEEEEEcccccHHHHHH----HHhCCE---EEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCC
Confidence 458999999999999988 445645 579999999999999886 45678899987763
No 66
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=94.05 E-value=0.02 Score=55.06 Aligned_cols=56 Identities=16% Similarity=0.159 Sum_probs=41.0
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC--------------CCCceeecChhhHHH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH--------------PETKVRNEAADDFLS 343 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~--------------p~~~v~~~di~d~~~ 343 (433)
.++||+|||.|..++-| ...|.. +.++|+++..+...+.|. ..+.++++|+.+++.
T Consensus 90 ~~VLDl~~G~G~dal~l----A~~g~~---V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~ 159 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVL----ASVGCR---VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALT 159 (258)
T ss_dssp CCEEETTCTTCHHHHHH----HHHTCC---EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHST
T ss_pred CEEEEcCCcCCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHH
Confidence 68999999999999876 333666 479999996544444331 235688999988764
No 67
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=93.96 E-value=0.048 Score=51.62 Aligned_cols=59 Identities=12% Similarity=0.043 Sum_probs=45.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC---------CceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE---------TKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~---------~~v~~~di~d~~ 342 (433)
...++|||.||+|.+++-|.. ...+.. +.++|+++.+++..+.|... ..+++.|+.++.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~--~~~~~~---v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAA--RLEKAE---VTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRA 103 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHH--HCTTEE---EEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCH
T ss_pred CCCEEEEeCChHhHHHHHHHH--hCCCCe---EEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHh
Confidence 345899999999999987721 222444 57999999999999998754 468889998773
No 68
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=93.88 E-value=0.044 Score=53.59 Aligned_cols=75 Identities=15% Similarity=0.143 Sum_probs=53.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHHhcCc----
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLSLLKE---- 347 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ll~~---- 347 (433)
...++||++||.||.++-|. ... +.. +.|+|+++.+++..+.|. +++.+++.|+.++......
T Consensus 118 ~g~~VLDlg~G~G~~t~~la---~~~~~~~~---v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLA---QLMRNDGV---IYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHH---HHTTTCSE---EEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHH---HHhCCCCE---EEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEE
Confidence 34589999999999999872 222 244 479999999999888874 4567888999887542111
Q ss_pred -CCCCCchhhccc
Q 013949 348 -WAKLCQYFSIYD 359 (433)
Q Consensus 348 -~~~PCQ~fS~ag 359 (433)
...||.+.....
T Consensus 192 l~d~Pcsg~g~~~ 204 (315)
T 1ixk_A 192 LLDAPCTGSGTIH 204 (315)
T ss_dssp EEECCTTSTTTCC
T ss_pred EEeCCCCCccccc
Confidence 235997765443
No 69
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=93.81 E-value=0.041 Score=56.34 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=43.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
.-++||||||.|.+++-| ...+.. +.++|+++.|++..+.|. +++.++++|+.++
T Consensus 287 ~~~VLDlgcG~G~~~~~l----a~~~~~---V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPL----ATQAAS---VVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEED 346 (433)
T ss_dssp TCEEEEESCTTTTTHHHH----HTTSSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSC
T ss_pred CCEEEECCCCCCHHHHHH----HhhCCE---EEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHH
Confidence 458999999999999987 334555 579999999999888774 3467888888764
No 70
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=93.80 E-value=0.069 Score=48.10 Aligned_cols=56 Identities=20% Similarity=0.252 Sum_probs=47.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-~~~v~~~di~d~ 341 (433)
...++||+-||.|.++..| ...|.++ .++|+++.+++..+.+.+ +..+++.|+.++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~ 101 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKL----LLAGRTV---YGIEPSREMRMIAKEKLPKEFSITEGDFLSF 101 (220)
T ss_dssp CCSEEEEECCTTSHHHHHH----HHTTCEE---EEECSCHHHHHHHHHHSCTTCCEESCCSSSC
T ss_pred CCCeEEEeCCCCCHHHHHH----HhCCCeE---EEEeCCHHHHHHHHHhCCCceEEEeCChhhc
Confidence 4569999999999999887 4457774 799999999999999988 678888888765
No 71
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=93.56 E-value=0.052 Score=51.39 Aligned_cols=57 Identities=23% Similarity=0.126 Sum_probs=44.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~ 342 (433)
...++||+.||.|.++.-| ...|.++ .++|+++.+++..+.+.. ...+++.|+.++.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l----~~~g~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYL----SLLGYDV---TSWDHNENSIAFLNETKEKENLNISTALYDINAAN 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC
T ss_pred CCCcEEEECCCCCHHHHHH----HHCCCeE---EEEECCHHHHHHHHHHHHHcCCceEEEEecccccc
Confidence 4568999999999999887 4558774 799999999888777643 4567888887643
No 72
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=93.51 E-value=0.079 Score=51.12 Aligned_cols=56 Identities=16% Similarity=0.155 Sum_probs=46.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC--CceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE--TKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~--~~v~~~di~d~~ 342 (433)
.. ++||+-||.|.++..| ...|.+ +.|+|+|+.+++..+.|+++ ..++++|+.++.
T Consensus 47 ~~-~VLEIG~G~G~lt~~L----~~~~~~---V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRAL----LEAGAE---VTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYP 104 (271)
T ss_dssp CS-CEEEECCTTSHHHHHH----HHTTCC---EEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSC
T ss_pred CC-eEEEEeCchHHHHHHH----HHcCCE---EEEEECCHHHHHHHHHhcCCCCEEEEECChhhCC
Confidence 35 9999999999999988 445655 57999999999999999864 578889987664
No 73
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=93.31 E-value=0.074 Score=53.22 Aligned_cols=59 Identities=19% Similarity=0.138 Sum_probs=45.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~ 342 (433)
...++||++||.|++..-+ ...|... .++++|+++.+++.-+.|. +...+.+.|+.++.
T Consensus 217 ~~~~vLD~gCGsG~~~i~~----a~~~~~~-~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIEL----ALRRYSG-EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp CSCCEEETTCTTCHHHHHH----HHTTCCS-CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred CCCEEEEccCcCcHHHHHH----HHhCCCC-eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 3568999999999998866 3344311 2579999999999988885 24578899998875
No 74
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=93.30 E-value=0.067 Score=47.93 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-|. ... +.+ +.++|+++.+++..+.|. +...++++|+.+.
T Consensus 40 ~~~~vLDiG~G~G~~~~~la---~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEAS---NLMPNGR---IFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG 102 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH---HHCTTSE---EEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT
T ss_pred CCCEEEEECCCCCHHHHHHH---HHCCCCE---EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh
Confidence 45699999999999998772 222 245 479999999998888774 4457788887544
No 75
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=93.29 E-value=0.17 Score=45.21 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=46.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
..++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+ +...+...|+.++.
T Consensus 53 ~~~vLdiG~G~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~ 107 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRAL----ADRGIE---AVGVDGDRTLVDAARAA-GAGEVHLASYAQLA 107 (227)
T ss_dssp CSEEEEETCTTCHHHHHH----HTTTCE---EEEEESCHHHHHHHHHT-CSSCEEECCHHHHH
T ss_pred CCEEEEeCCCCCHHHHHH----HHCCCE---EEEEcCCHHHHHHHHHh-cccccchhhHHhhc
Confidence 469999999999999887 445776 47999999999999988 56678889988875
No 76
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=93.21 E-value=0.047 Score=53.07 Aligned_cols=55 Identities=20% Similarity=0.172 Sum_probs=39.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
.-++||+.||.|+++..| ...|.+ +.++|+++.+++..+.|. ++..++++|+.++
T Consensus 43 ~~~VLDiG~G~G~lt~~L----a~~~~~---v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKL----LPLAKK---VITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT 102 (299)
T ss_dssp TCEEEEECCTTSTTHHHH----TTTSSE---EEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS
T ss_pred cCEEEEEcCcCcHHHHHH----HhcCCE---EEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC
Confidence 458999999999999988 344655 479999999998887764 4556777777654
No 77
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.20 E-value=0.077 Score=47.83 Aligned_cols=55 Identities=20% Similarity=0.201 Sum_probs=43.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~ 341 (433)
..++|||.||.|.++.-| ...|.+ +.++|+++.+++..+.|. ++..+++.|+.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLL----EDYGFE---VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL 97 (227)
T ss_dssp CCEEEEETCTTSHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC
T ss_pred CCeEEEEeccCCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC
Confidence 569999999999999877 445655 479999998888877664 6677888888764
No 78
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=93.16 E-value=0.14 Score=47.21 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=45.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc-----CCCCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN-----HPETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N-----~p~~~v~~~di~d~~~ 343 (433)
...++||+.||.|.++..|. ....+.. +.+||+++.+++..+.| .++..+++.|+.+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA--~~~p~~~---v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~ 98 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMA--KDRPEQD---FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLH 98 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHH--HHCTTSE---EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHH--HHCCCCe---EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHH
Confidence 35589999999999998772 1233555 47999999988777665 3456889999998754
No 79
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=93.14 E-value=0.084 Score=47.82 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=44.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~ 342 (433)
..++|||.||.|.++..|.. ...+.+ +.++|+++.+++..+.|. ++..+++.|+.++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~--~~p~~~---v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~ 104 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAK--QNPDIN---YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT 104 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHH--HCTTSE---EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG
T ss_pred CCeEEEEccCcCHHHHHHHH--HCCCCC---EEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH
Confidence 45899999999999987721 223556 479999999998887764 56678899988754
No 80
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.13 E-value=0.13 Score=47.03 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=45.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc-----CCCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN-----HPETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N-----~p~~~v~~~di~d~~~ 343 (433)
..++||+-||.|.++..|. ....+.+ +.++|+++.+++..+.| .++..+++.|+.++..
T Consensus 39 ~~~vLDiGcG~G~~~~~la--~~~p~~~---v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~ 102 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMA--KQNPDIN---YIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD 102 (213)
T ss_dssp CCEEEEECCTTSHHHHHHH--HHCTTSE---EEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH
T ss_pred CceEEEEecCCCHHHHHHH--HHCCCCC---EEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh
Confidence 4589999999999998872 1223566 47999999998887765 3567889999988754
No 81
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=93.13 E-value=0.081 Score=48.09 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=46.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++..| ...|.+ +.++|+++.+++..+.++++..+++.|+.++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l----~~~~~~---v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHF----TKEFGD---TAGLELSEDMLTHARKRLPDATLHQGDMRDF 95 (239)
T ss_dssp TCCEEEEETCTTSHHHHHH----HHHHSE---EEEEESCHHHHHHHHHHCTTCEEEECCTTTC
T ss_pred CCCeEEEecccCCHHHHHH----HHhCCc---EEEEeCCHHHHHHHHHhCCCCEEEECCHHHc
Confidence 3468999999999999887 333444 4799999999999999998888899988765
No 82
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=93.10 E-value=0.1 Score=46.45 Aligned_cols=57 Identities=21% Similarity=0.258 Sum_probs=45.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.. .+.++|+++.+++..+.+. +...+++.|+.++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l----~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYEL----FLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKL 101 (215)
T ss_dssp TTCCEEEETCTTCSHHHHH----HHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSC
T ss_pred CCCeEEEECCCCcHHHHHH----HHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcC
Confidence 3568999999999999877 455763 2579999999999999887 4567788887664
No 83
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=93.04 E-value=0.097 Score=48.10 Aligned_cols=57 Identities=19% Similarity=0.123 Sum_probs=46.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC--CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP--ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p--~~~v~~~di~d~~ 342 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+.+ ++.+++.|+.++.
T Consensus 56 ~~~~vLD~GcG~G~~~~~l----a~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~ 114 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFL----SQFFPR---VIGLDVSKSALEIAAKENTAANISYRLLDGLVPE 114 (245)
T ss_dssp TTSCEEEETCTTSHHHHHH----HHHSSC---EEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHH
T ss_pred CCCeEEEEcCCCCHHHHHH----HHhCCC---EEEEECCHHHHHHHHHhCcccCceEEECcccccc
Confidence 4568999999999999887 445555 4799999999999999876 4578888887654
No 84
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=93.04 E-value=0.071 Score=50.56 Aligned_cols=55 Identities=22% Similarity=0.290 Sum_probs=44.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcCC--CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNHP--ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~p--~~~v~~~di~d~~ 342 (433)
.-++||+.||.|+++..| ...| .+ +.++|+|+.+++..+.| + +..++++|+.++.
T Consensus 32 ~~~VLDiG~G~G~lt~~L----~~~~~~~---v~avEid~~~~~~~~~~-~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVL----LQHPLKK---LYVIELDREMVENLKSI-GDERLEVINEDASKFP 89 (249)
T ss_dssp TCEEEEEESCHHHHHHHH----TTSCCSE---EEEECCCHHHHHHHTTS-CCTTEEEECSCTTTCC
T ss_pred cCEEEEEcCchHHHHHHH----HHcCCCe---EEEEECCHHHHHHHHhc-cCCCeEEEEcchhhCC
Confidence 458999999999999988 4445 44 57999999999999988 4 3478889887653
No 85
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=93.02 E-value=0.058 Score=53.27 Aligned_cols=59 Identities=19% Similarity=0.198 Sum_probs=45.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcCC-----CCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNHP-----ETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~p-----~~~v~~~di~d~~~ 343 (433)
...++||+|||.|.+..-+ +..+ +.. ++++|+++.+++..+.|.. ...+.+.|+.++..
T Consensus 203 ~~~~vLD~gcGsG~~~ie~---a~~~~~~~~---v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEA---ASTLGPTSP---VYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp TTCCEEESSCTTSHHHHHH---HHHHCTTSC---EEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred CCCEEEeCCCCcCHHHHHH---HHhhCCCce---EEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 3458999999999998765 2333 355 4799999999999998853 46788999988753
No 86
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=92.92 E-value=0.079 Score=47.66 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=45.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC---CceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE---TKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~---~~v~~~di~d~~ 342 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+... ..+++.|+.++.
T Consensus 51 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKL----APHCKR---LTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS 110 (216)
T ss_dssp SEEEEEEECCTTSHHHHHH----GGGEEE---EEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC
T ss_pred CCCcEEEEcCCCCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC
Confidence 4569999999999999887 445644 57999999999999998753 467788876653
No 87
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.83 E-value=0.088 Score=50.94 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=35.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
.-.|||+|||.|.+...+ ...|.++ +++|+++.+++.-+.|.
T Consensus 236 ~~~vlD~f~GsGt~~~~a----~~~g~~~---~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAA----ARWGRRA---LGVELVPRYAQLAKERF 277 (297)
T ss_dssp TCEEEETTCTTTHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH----HHcCCeE---EEEeCCHHHHHHHHHHH
Confidence 448999999999888765 6678774 79999999999888775
No 88
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=92.79 E-value=0.072 Score=48.75 Aligned_cols=54 Identities=13% Similarity=-0.040 Sum_probs=44.0
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC------CceeecChhhH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE------TKVRNEAADDF 341 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~------~~v~~~di~d~ 341 (433)
.++||+-||.|.+..-| ...|.. +.++|+++.+++..+.+.+. +.+++.|+.++
T Consensus 68 ~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 127 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAM----ASPERF---VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTW 127 (235)
T ss_dssp EEEEEETCTTCHHHHHH----CBTTEE---EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTC
T ss_pred CCEEEeCCCCCHHHHHH----HhCCCe---EEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcC
Confidence 49999999999999877 456776 47999999999999988764 45777777654
No 89
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=92.74 E-value=0.12 Score=47.71 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=44.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~ 342 (433)
..++||+.||.|.++.-|.. ...|.+ +.++|+++.+++..+.|. +++.++++|+.++.
T Consensus 71 ~~~vLDiG~G~G~~~~~la~--~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 133 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKI--CFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG 133 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHH--HCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHT
T ss_pred CCEEEEecCCCCHHHHHHHH--hCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhc
Confidence 45899999999998887721 234556 479999998888877652 45678899998864
No 90
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=92.73 E-value=0.038 Score=49.16 Aligned_cols=59 Identities=17% Similarity=0.284 Sum_probs=32.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~ 342 (433)
...++||+.||.|.++.-+.. ...+.+ +.++|+++.+++..+.|.. ...+++.|+.+..
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~--~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 92 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIAL--ACPGVS---VTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWL 92 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHH--HCTTEE---EEEEECC-------------------CCHHHHHHHH
T ss_pred CCCEEEEecCCHhHHHHHHHH--hCCCCe---EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhh
Confidence 567999999999999987722 222545 5799999999999988876 3567777877643
No 91
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=92.71 E-value=0.079 Score=53.50 Aligned_cols=57 Identities=21% Similarity=0.260 Sum_probs=45.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~ 342 (433)
...++|||.||.|.++.-| ...|.+ +.++|+++.+++..+.|.. ...+++.|+.++.
T Consensus 233 ~~~~VLDlGcG~G~~~~~l----a~~g~~---V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPL----ARMGAE---VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL 293 (381)
T ss_dssp TTCEEEEETCTTSTTHHHH----HHTTCE---EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS
T ss_pred CCCEEEEEeeeCCHHHHHH----HHcCCE---EEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc
Confidence 4569999999999999887 445766 4799999999988877753 4678888887654
No 92
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=92.71 E-value=0.066 Score=52.36 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=45.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~~ 342 (433)
.-++||+-||.|.++..| ...|.+ +.++|+|+.+++..+.++ ++..++++|+.++.
T Consensus 51 ~~~VLEIG~G~G~lT~~L----a~~~~~---V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEEL----AKNAKK---VYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVD 109 (295)
T ss_dssp TCEEEEECCTTSHHHHHH----HHHSSE---EEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSC
T ss_pred cCEEEEECCCchHHHHHH----HhcCCE---EEEEECCHHHHHHHHHHhccCCCeEEEECchhhCC
Confidence 458999999999999988 333555 479999999999888875 67789999987653
No 93
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=92.69 E-value=0.13 Score=46.02 Aligned_cols=55 Identities=18% Similarity=0.181 Sum_probs=44.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
..++||+-||.|.++.-| ...|.++ .++|+++.+++..+.+. +..+++.|+.++.
T Consensus 44 ~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAM----LAAGFDV---DATDGSPELAAEASRRL-GRPVRTMLFHQLD 98 (211)
T ss_dssp TCEEEESSCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHH-TSCCEECCGGGCC
T ss_pred CCcEEEECCCCCHHHHHH----HHcCCeE---EEECCCHHHHHHHHHhc-CCceEEeeeccCC
Confidence 459999999999999877 4457774 79999999999998886 4567778877653
No 94
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=92.60 E-value=0.17 Score=48.53 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=45.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---------p~~~v~~~di~d~~~ 343 (433)
..++|||.||.|++..-+ ++..|.. .+.+||+|+.+++..+.|+ |...++++|+.+++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l---~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~ 143 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREI---LKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA 143 (275)
T ss_dssp CCEEEEESCTTCHHHHHH---TTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH
T ss_pred CCEEEEECCchHHHHHHH---HhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh
Confidence 358999999999998866 2333543 2579999999999998886 345788999888753
No 95
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=92.60 E-value=0.13 Score=48.65 Aligned_cols=57 Identities=7% Similarity=0.009 Sum_probs=45.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----------------------CCCceeec
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----------------------PETKVRNE 336 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----------------------p~~~v~~~ 336 (433)
...++||+=||.|..+.-| ...|+++ .+||+++.|++..+.++ +++.++++
T Consensus 68 ~~~~vLD~GCG~G~~~~~L----a~~G~~V---~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWF----ADRGHTV---VGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp CSCEEEETTCTTCTHHHHH----HHTTCEE---EEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred CCCeEEEeCCCCcHHHHHH----HHCCCeE---EEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC
Confidence 3569999999999998877 5569874 69999999999887654 34567888
Q ss_pred ChhhHH
Q 013949 337 AADDFL 342 (433)
Q Consensus 337 di~d~~ 342 (433)
|+.++.
T Consensus 141 D~~~l~ 146 (252)
T 2gb4_A 141 SIFDLP 146 (252)
T ss_dssp CTTTGG
T ss_pred ccccCC
Confidence 887764
No 96
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=92.56 E-value=0.12 Score=47.21 Aligned_cols=56 Identities=23% Similarity=0.220 Sum_probs=45.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC--CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH--PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~--p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.++ .++|+++.+++..+.+. ++..+++.|+.++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 110 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKL----SRTGYKA---VGVDISEVMIQKGKERGEGPDLSFIKGDLSSL 110 (242)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHTTTCBTTEEEEECBTTBC
T ss_pred CCCeEEEEcCCCCHHHHHH----HHcCCeE---EEEECCHHHHHHHHhhcccCCceEEEcchhcC
Confidence 3559999999999999887 4457774 69999999999999884 4456778887764
No 97
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.50 E-value=0.082 Score=51.56 Aligned_cols=57 Identities=16% Similarity=0.126 Sum_probs=44.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d~~~ 343 (433)
.-.+||||+|.|++..-+ ++|.+- ...||.++.++++++.|.. .+.+++.|....+.
T Consensus 92 ~~~~LDlfaGSGaLgiEa-----LS~~d~--~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~ 151 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQ-----LRSQDR--LYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLN 151 (283)
T ss_dssp SSSSCCEEECHHHHHHHH-----SCTTSE--EEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHH
T ss_pred CCCceeEeCCcHHHHHHH-----cCCCCe--EEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHH
Confidence 346899999999987643 335453 6899999999999999984 46889999877654
No 98
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=92.42 E-value=0.14 Score=47.04 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=45.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~~ 342 (433)
...++||+-||.|.++.-| ...+.. .++++|+++.+++..+.+. ++..++++|+.++.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l----~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKV----QEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVA 121 (236)
T ss_dssp TCEEEEEECCTTSHHHHHH----HTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHG
T ss_pred CCCeEEEEeccCCHHHHHH----HhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhh
Confidence 4569999999999999877 444543 3689999999998888876 34578889998873
No 99
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=92.41 E-value=0.11 Score=47.01 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=44.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----------------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----------------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----------------p~~~v~~~di~d~ 341 (433)
...++||+=||.|..+.-| ...|+++ .++|+++.+++..+.+. +++.++++|+.++
T Consensus 22 ~~~~vLD~GCG~G~~~~~l----a~~g~~V---~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWL----SGQGYHV---VGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp TTCEEEETTTCCSHHHHHH----HHHCCEE---EEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred CCCEEEEeCCCCcHhHHHH----HHCCCeE---EEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 3458999999999998877 4458874 69999999999887762 4567788888765
Q ss_pred H
Q 013949 342 L 342 (433)
Q Consensus 342 ~ 342 (433)
.
T Consensus 95 ~ 95 (203)
T 1pjz_A 95 T 95 (203)
T ss_dssp T
T ss_pred C
Confidence 3
No 100
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=92.29 E-value=0.13 Score=47.37 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=43.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~ 341 (433)
..++|||.||.|.++.-| ...|.+ +.++|+++.+++..+.|. ....+++.|+.++
T Consensus 42 ~~~vLDlGcG~G~~~~~l----~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~ 100 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLEL----AERGYE---VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI 100 (252)
T ss_dssp CCEEEEETCTTCHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC
T ss_pred CCEEEEeCCCCCHHHHHH----HHCCCe---EEEEECCHHHHHHHHHHHHhcCCceEEEECChhhc
Confidence 458999999999999887 445876 479999999888877664 2467788888765
No 101
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=92.28 E-value=0.18 Score=45.74 Aligned_cols=55 Identities=15% Similarity=-0.002 Sum_probs=45.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-CCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-ETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-~~~v~~~di~d~ 341 (433)
..++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+.+ +..+++.|++++
T Consensus 43 ~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~ 98 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRL----QEHFND---ITCVEASEEAISHAQGRLKDGITYIHSRFEDA 98 (250)
T ss_dssp SSCEEEESCTTSHHHHHH----TTTCSC---EEEEESCHHHHHHHHHHSCSCEEEEESCGGGC
T ss_pred CCcEEEECCCCCHHHHHH----HHhCCc---EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc
Confidence 458999999999999877 456665 4799999999999999987 567888888765
No 102
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=92.28 E-value=0.12 Score=46.09 Aligned_cols=57 Identities=16% Similarity=0.212 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-----CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-----ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-----~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-| ...|.. .+.++|+++.+++..+.|.. +..+++.|+.++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l----~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 121 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAA----HKLGAK--SVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD 121 (205)
T ss_dssp SCCEEEEETCTTSHHHHHH----HHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT
T ss_pred CCCEEEEECCCCCHHHHHH----HHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc
Confidence 3569999999999998877 445653 25799999999888877642 367778887653
No 103
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=92.24 E-value=0.15 Score=52.39 Aligned_cols=76 Identities=20% Similarity=0.156 Sum_probs=52.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHHHhcC------
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFLSLLK------ 346 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~~ll~------ 346 (433)
...++||++||.||.++-|.. ...| .. +.++|+++.+++..+.|. +++.+++.|+.++...+.
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~--~~~~~~~---v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAE--LMKNKGK---IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--HTTTCSE---EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CcCEEEEeCCCccHHHHHHHH--HcCCCCE---EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCE
Confidence 345899999999999998732 2233 34 479999999999888873 356778888876542111
Q ss_pred -cCCCCCchhhccc
Q 013949 347 -EWAKLCQYFSIYD 359 (433)
Q Consensus 347 -~~~~PCQ~fS~ag 359 (433)
....||.++....
T Consensus 334 Vl~D~Pcsg~g~~~ 347 (450)
T 2yxl_A 334 VLLDAPCTSSGTIG 347 (450)
T ss_dssp EEEECCCCCGGGTT
T ss_pred EEEcCCCCCCeeec
Confidence 1235998876654
No 104
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=92.15 E-value=0.22 Score=43.22 Aligned_cols=56 Identities=25% Similarity=0.197 Sum_probs=42.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CC--CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PE--TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~--~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-+ ...|.+ +.++|+++.+++..+.|. ++ ..+++.|+.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~----~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIAL----ADEVKS---TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp TTCEEEEETCTTSHHHHHH----GGGSSE---EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred CCCeEEEeCCCCCHHHHHH----HHcCCe---EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 4569999999999999877 233666 479999999988887774 23 56777877653
No 105
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=92.13 E-value=0.2 Score=45.27 Aligned_cols=59 Identities=15% Similarity=0.146 Sum_probs=43.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
..++||+.||.|..+.-|.. ... +.+ +.++|+++.+++..+.|+ +...++++|+.++..
T Consensus 65 ~~~vLdiG~G~G~~~~~la~--~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 130 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGL--ALPKDGT---LITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLA 130 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHT--TCCTTCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHHH--hCCCCCE---EEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHH
Confidence 45899999999999987721 111 555 479999999888887774 235788899977653
No 106
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=92.12 E-value=0.18 Score=50.73 Aligned_cols=72 Identities=19% Similarity=0.158 Sum_probs=51.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----------CCCceeecChhhHHHhcCc
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----------PETKVRNEAADDFLSLLKE 347 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----------p~~~v~~~di~d~~~ll~~ 347 (433)
+..+|||++||.||=++-| ...+-.- .++|+|+++..++.++.|. ..+.+.+.|...+......
T Consensus 148 pg~~VLD~CAaPGGKT~~l----a~~~~~~-~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLAL----LQTGCCR-NLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp TTEEEEESSCTTCHHHHHH----HHTTCEE-EEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred CCCEEEEecCCccHHHHHH----HHhcCCC-cEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc
Confidence 5669999999999999877 2233321 3689999999999888774 1345677888877654321
Q ss_pred ------CCCCCchh
Q 013949 348 ------WAKLCQYF 355 (433)
Q Consensus 348 ------~~~PCQ~f 355 (433)
.+.||.+-
T Consensus 223 ~fD~VLlDaPCSg~ 236 (359)
T 4fzv_A 223 TYDRVLVDVPCTTD 236 (359)
T ss_dssp CEEEEEEECCCCCH
T ss_pred cCCEEEECCccCCC
Confidence 34699873
No 107
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=92.11 E-value=0.15 Score=47.02 Aligned_cols=58 Identities=16% Similarity=0.047 Sum_probs=46.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|.. ...|.. +.++|+++.+++..+.+.++..+++.|++++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~--~~~~~~---v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~ 90 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTD--RYGVNV---ITGIDSDDDMLEKAADRLPNTNFGKADLATW 90 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHH--HHCTTS---EEEEESCHHHHHHHHHHSTTSEEEECCTTTC
T ss_pred CCCEEEEecCcCCHHHHHHHH--hCCCCE---EEEEECCHHHHHHHHHhCCCcEEEECChhhc
Confidence 356899999999999987722 112556 4699999999999999988888888888764
No 108
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=92.10 E-value=0.17 Score=49.07 Aligned_cols=58 Identities=9% Similarity=0.141 Sum_probs=44.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---------CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---------PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---------p~~~v~~~di~d~~ 342 (433)
..++|||.||.|+++.-+ ++..|.. .+.+||+|+.+++..+.|+ +...++++|+.+++
T Consensus 91 ~~~VLdiG~G~G~~~~~l---~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l 157 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREV---LKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYV 157 (296)
T ss_dssp CCEEEEEECTTCHHHHHH---TTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHG
T ss_pred CCEEEEEcCCcCHHHHHH---HhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHH
Confidence 358999999999999877 2332432 2579999999999988876 34678889988765
No 109
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=91.97 E-value=0.18 Score=51.30 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=53.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHHHhcC-------c
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFLSLLK-------E 347 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~~ll~-------~ 347 (433)
...++||++||.||.++-+.. ...+.. +.++|+++.+++..+.|.. ...+++.|+.++...+. .
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~--~~~~~~---v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILE--VAPEAQ---VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHH--HCTTCE---EEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CcCeEEEECCCchHHHHHHHH--HcCCCE---EEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEE
Confidence 345899999999999998732 222234 5799999999998888742 35788889877653221 1
Q ss_pred CCCCCchhhccc
Q 013949 348 WAKLCQYFSIYD 359 (433)
Q Consensus 348 ~~~PCQ~fS~ag 359 (433)
...||.+.....
T Consensus 321 ~D~Pcsg~g~~~ 332 (429)
T 1sqg_A 321 LDAPCSATGVIR 332 (429)
T ss_dssp EECCCCCGGGTT
T ss_pred EeCCCCcccccC
Confidence 246998876654
No 110
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=91.97 E-value=0.22 Score=46.57 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=45.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHHh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLSL 344 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~l 344 (433)
...++||+.||.|+.+.-|.. ... +.. +.++|+++.+++..+.|+ +.+.++++|+.+++..
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~--~~~~~~~---v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMAR--ELPADGQ---LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLES 130 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHT--TSCTTCE---EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHT
T ss_pred CCCEEEEecCCchHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHh
Confidence 346999999999999987721 111 455 479999999888887774 2457889999887643
No 111
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=91.95 E-value=0.22 Score=45.86 Aligned_cols=57 Identities=21% Similarity=0.211 Sum_probs=45.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC--CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP--ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p--~~~v~~~di~d~ 341 (433)
...++|||-||.|.++.-| ...|.. .+.++|+++.+++..+.+.. ...+++.|+.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l----~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 102 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYA----AEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDI 102 (253)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGC
T ss_pred CCCEEEEECCCCCHHHHHH----HHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhC
Confidence 4579999999999999877 555763 25799999999999998874 457788888765
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=91.91 E-value=0.21 Score=43.24 Aligned_cols=56 Identities=21% Similarity=0.257 Sum_probs=43.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-+ ...+.. +.++|+++.+++..+.|. +...+++.|+.+.
T Consensus 33 ~~~~vldiG~G~G~~~~~l----~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLEL----AGRVRR---VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp TTCEEEEESCTTSHHHHHH----HTTSSE---EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred CCCEEEEECCCCCHHHHHH----HHhcCE---EEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 3459999999999998877 444544 579999999998888763 3456788888774
No 113
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=91.81 E-value=0.17 Score=47.88 Aligned_cols=58 Identities=21% Similarity=0.193 Sum_probs=44.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+.||.|+++..|.. ...+.+ ++++|+++.+++..+.|. ++..+++.|+.+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~--~~~~~~---v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~ 171 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALAS--ERPDCE---IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA 171 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHH--HCTTSE---EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG
T ss_pred CCCEEEEecCCccHHHHHHHH--hCCCCE---EEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh
Confidence 345899999999999987721 223555 479999999999988884 3467888888764
No 114
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=91.79 E-value=0.16 Score=46.22 Aligned_cols=59 Identities=17% Similarity=0.135 Sum_probs=45.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d~~ 342 (433)
...++||+-||.|.++.-|.. ...|.+ +.++|+++.+++..+.+.+ ...+++.|+.++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~--~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~ 105 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLME--KYPEAT---FTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD 105 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHH--HCTTCE---EEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC
T ss_pred CCCeEEEecCCCCHHHHHHHH--hCCCCe---EEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC
Confidence 457999999999999988721 222666 4799999999999999876 4567778876653
No 115
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=91.79 E-value=0.14 Score=45.61 Aligned_cols=55 Identities=20% Similarity=0.171 Sum_probs=44.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-p~~~v~~~di~d~ 341 (433)
..++||+-||.|.++.-| ...|.++ .++|+++.+++..+.+. ++..+++.|+.++
T Consensus 47 ~~~vLdiG~G~G~~~~~l----~~~~~~v---~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~ 102 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHL----SGLADRV---TALDGSAEMIAEAGRHGLDNVEFRQQDLFDW 102 (218)
T ss_dssp CSEEEEESCTTSHHHHHH----HHHSSEE---EEEESCHHHHHHHGGGCCTTEEEEECCTTSC
T ss_pred CCeEEEECCCCCHHHHHH----HhcCCeE---EEEeCCHHHHHHHHhcCCCCeEEEecccccC
Confidence 349999999999999887 3347774 69999999999888755 5667888888765
No 116
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=91.74 E-value=0.19 Score=45.21 Aligned_cols=56 Identities=25% Similarity=0.331 Sum_probs=43.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC----------CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE----------TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~----------~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+... ..+++.|+.++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 95 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLEL----ASKGYS---VTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL 95 (235)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC
T ss_pred CCCeEEEECCCCCHHHHHH----HhCCCe---EEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc
Confidence 4569999999999999887 445776 47999999999999988753 24556666543
No 117
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=91.65 E-value=0.22 Score=44.47 Aligned_cols=56 Identities=11% Similarity=0.022 Sum_probs=43.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-| ...|.+ ++++|+++.+++..+.|+ ++..+++.|+.+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l----a~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAIL----AHLVQH---VCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG 137 (210)
T ss_dssp TTCEEEEECCTTSHHHHHH----HHHSSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred CCCEEEEEcCCCCHHHHHH----HHhCCE---EEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 4569999999999999877 233655 479999999988887764 3456778887653
No 118
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=91.62 E-value=0.16 Score=45.78 Aligned_cols=49 Identities=12% Similarity=0.051 Sum_probs=37.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
...++|||.||.|+++.-+ ...+.. +.++|+++.+ ..+++.++++|+.+
T Consensus 25 ~g~~VLDlG~G~G~~s~~l----a~~~~~---V~gvD~~~~~------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVL----NSLARK---IISIDLQEME------EIAGVRFIRCDIFK 73 (191)
T ss_dssp TTCEEEEESCTTCHHHHHH----TTTCSE---EEEEESSCCC------CCTTCEEEECCTTS
T ss_pred CCCEEEEEeecCCHHHHHH----HHcCCc---EEEEeccccc------cCCCeEEEEccccC
Confidence 4569999999999999877 223555 4799999853 34677888999865
No 119
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=91.54 E-value=0.16 Score=47.85 Aligned_cols=56 Identities=18% Similarity=0.216 Sum_probs=45.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~ 342 (433)
..++||+-||.|.++.-| ...|..+ .++|+++.+++..+.+. +.+.+++.|+.++.
T Consensus 69 ~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 130 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKM----AERGHQV---ILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA 130 (285)
T ss_dssp CCEEEEETCTTCHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG
T ss_pred CCEEEEeCCcchHHHHHH----HHCCCEE---EEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh
Confidence 569999999999999887 4458774 69999999998888775 34568888888765
No 120
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=91.51 E-value=0.15 Score=48.81 Aligned_cols=54 Identities=11% Similarity=0.071 Sum_probs=41.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
...++|||.||.|.++.-| ...|.. +.++|+++.+++..+.|.... +++.++.+
T Consensus 45 ~g~~VLDlGcGtG~~a~~L----a~~g~~---V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~ 98 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKA----LERGAS---VTVFDFSQRMCDDLAEALADR-CVTIDLLD 98 (261)
T ss_dssp TTCEEEEECTTCHHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHTSSS-CCEEEECC
T ss_pred CcCEEEEEeCcchHHHHHH----HhcCCE---EEEEECCHHHHHHHHHHHHhc-cceeeeee
Confidence 4569999999999999887 456776 479999999999999998653 34444433
No 121
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=91.50 E-value=0.16 Score=44.65 Aligned_cols=55 Identities=22% Similarity=0.134 Sum_probs=42.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
..++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+. ++..+++.|+.++
T Consensus 33 ~~~vLdiG~G~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYL----AANGYD---VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL 92 (199)
T ss_dssp SCEEEEETCTTSHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC
T ss_pred CCeEEEEcCCCCHHHHHH----HHCCCe---EEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC
Confidence 459999999999998877 444776 479999999988877653 3466778887764
No 122
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=91.45 E-value=0.28 Score=46.98 Aligned_cols=58 Identities=14% Similarity=0.099 Sum_probs=44.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---------------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---------------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---------------p~~~v~~~di~d~~~ 343 (433)
..++|||.||.|++..-+ ++. |.. .+.+||+|+.+++..+.|+ |...++++|+.+++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l---~~~-~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREV---LQH-DVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp CCEEEEEECTTSHHHHHH---TTS-CCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCeEEEEcCCcCHHHHHH---HhC-CCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhc
Confidence 358999999999999877 233 543 2579999999999888776 345788899887653
No 123
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=91.40 E-value=0.19 Score=45.72 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=43.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d 340 (433)
...++||+.||.|.++.-| ...|.+ +.++|+++.+++..+.|.. +..+++.|+.+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l----~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~ 127 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALI----AEIVDK---VVSVEINEKMYNYASKLLSYYNNIKLILGDGTL 127 (231)
T ss_dssp TTCEEEEECCTTSHHHHHH----HHHSSE---EEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred CCCEEEEEcCCCCHHHHHH----HHHcCE---EEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 3459999999999999877 334544 5799999999999998876 45677888765
No 124
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=91.36 E-value=0.27 Score=46.28 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=45.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~ 342 (433)
...++||+.||.|.+++-|. ....+.+ +.++|+++.+++..+.|. .++.++++|++++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la--~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~ 143 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLK--IVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLA 143 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHH--HHCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHT
T ss_pred CCCEEEEEcCCCCHHHHHHH--HHCCCCE---EEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhh
Confidence 34589999999998887762 1223555 479999999999888773 34688999998875
No 125
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=91.32 E-value=0.2 Score=46.14 Aligned_cols=56 Identities=20% Similarity=0.249 Sum_probs=44.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+. ++..++..|+.++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPL----IARGYR---YIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI 98 (263)
T ss_dssp SCCEEEEETCTTSTTHHHH----HTTTCE---EEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC
T ss_pred CCCEEEEeCCcCCHHHHHH----HHCCCE---EEEEECCHHHHHHHHHHhhccCCceEEEEcccccC
Confidence 3468999999999999877 444766 479999999999998884 5566777877654
No 126
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=91.29 E-value=0.3 Score=44.29 Aligned_cols=56 Identities=14% Similarity=0.210 Sum_probs=44.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCC-eEeeEEEeecCHhhHHHHHHcCCC--CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGV-KLVTRWAIDINPHACKSLKFNHPE--TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~-~~~t~~avD~d~~A~~t~~~N~p~--~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|. + +.++|+++.+++..+.+.+. ..+++.|+.++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l----~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 101 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWA----HEHGASY---VLGLDLSEKMLARARAAGPDTGITYERADLDKL 101 (243)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCSE---EEEEESCHHHHHHHHHTSCSSSEEEEECCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHH----HHCCCCe---EEEEcCCHHHHHHHHHhcccCCceEEEcChhhc
Confidence 4569999999999998877 44576 5 57999999999999998764 46777777664
No 127
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=91.28 E-value=0.1 Score=50.21 Aligned_cols=56 Identities=20% Similarity=0.227 Sum_probs=43.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~ 341 (433)
..++||++||.|.+++.|. ...+.+ ++++|+++.|++..+.|.. ...+++.|+.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la---~~~~~~---v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~ 185 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVA---KFSDAI---VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP 185 (284)
T ss_dssp CCEEEEESCTTSHHHHHHH---HHSSCE---EEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG
T ss_pred CCEEEEEeCchhHHHHHHH---HCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh
Confidence 3589999999999998872 223555 4799999999999988842 257888888764
No 128
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=91.28 E-value=0.16 Score=46.15 Aligned_cols=56 Identities=16% Similarity=0.280 Sum_probs=44.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+.+ ...+++.|+.++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l----~~~~~~---~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENL----CPKFKN---TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL 96 (246)
T ss_dssp CTTEEEEETCTTSTTHHHH----GGGSSE---EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC
T ss_pred CCCeEEEeCCCCCHHHHHH----HHCCCc---EEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC
Confidence 3569999999999999877 445776 4799999999888877754 467788888765
No 129
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=91.26 E-value=0.28 Score=46.16 Aligned_cols=56 Identities=23% Similarity=0.337 Sum_probs=47.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.. +.++|+++.+++..+.+.++..+...|++++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~ 112 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKI----AQSGAE---VLGTDNAATMIEKARQNYPHLHFDVADARNF 112 (279)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHCTTSCEEECCTTTC
T ss_pred CCCEEEEecCCCCHHHHHH----HhCCCe---EEEEECCHHHHHHHHhhCCCCEEEECChhhC
Confidence 3459999999999999877 336666 4799999999999999988888888988764
No 130
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=91.23 E-value=0.29 Score=44.25 Aligned_cols=60 Identities=20% Similarity=0.159 Sum_probs=44.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
...++||+.||.|+.+.-|.. ... |.+ +.++|+++.+.+..+.|+. .+.++++|+.+++.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~--~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 124 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLAR--GLSSGGR---VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQ 124 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHT--TCCSSCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 345899999999999988721 111 555 4799999998888877652 25788899977653
No 131
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=91.19 E-value=0.13 Score=46.54 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=41.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHH---------HcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLK---------FNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~---------~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|.. ...|.+ +.++|+++.+++.+. ...++..+++.|+.++
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~--~~p~~~---v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l 93 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVAR--QNPSRL---VVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL 93 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHH--HCTTEE---EEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC
T ss_pred CCCEEEEecCCCCHHHHHHHH--HCCCCE---EEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC
Confidence 456899999999999988721 212555 579999999776532 2234567888888774
No 132
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=91.12 E-value=0.18 Score=45.76 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=43.3
Q ss_pred CCCcEEecccc-hhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHH
Q 013949 279 PEMSLLDLYSG-CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG-~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~ 342 (433)
...++||+.|| .|.++..+. ...+.+ +.++|+++.+++..+.|.. ...+++.|+..+.
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la---~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 117 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAE---KFFNCK---VTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK 117 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHH---HHHCCE---EEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST
T ss_pred CCCEEEEcCCCHHHHHHHHHH---HhcCCE---EEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh
Confidence 45699999999 999998772 222555 4799999999988877642 4678888865443
No 133
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=91.10 E-value=0.13 Score=45.73 Aligned_cols=53 Identities=21% Similarity=0.129 Sum_probs=41.7
Q ss_pred cEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhH
Q 013949 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDF 341 (433)
Q Consensus 282 ~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~ 341 (433)
++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+. +...+++.|+.++
T Consensus 32 ~vLdiGcG~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 88 (202)
T 2kw5_A 32 KILCLAEGEGRNACFL----ASLGYE---VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF 88 (202)
T ss_dssp EEEECCCSCTHHHHHH----HTTTCE---EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB
T ss_pred CEEEECCCCCHhHHHH----HhCCCe---EEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc
Confidence 9999999999999877 445776 479999999888877764 3456777777654
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=91.04 E-value=0.18 Score=47.42 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=43.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~ 341 (433)
...++||+.||.|.++..+ ...|.+ +.++|+++.+++..+.|.. ...+++.|+.+.
T Consensus 120 ~~~~VLDiGcG~G~l~~~l----a~~g~~---v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~ 179 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAA----EKLGGK---ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA 179 (254)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCE---EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH
T ss_pred CCCEEEEecCCCcHHHHHH----HHhCCe---EEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc
Confidence 3458999999999998876 445764 5799999999988887742 256777887764
No 135
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=91.03 E-value=0.22 Score=45.80 Aligned_cols=57 Identities=16% Similarity=0.085 Sum_probs=44.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|. ...|.+ +.++|+++.+++..+.+. +...+++.|+.++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~---~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYIN---EKYGAH---THGIDICSNIVNMANERVSGNNKIIFEANDILTK 114 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHHCCE---EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC
T ss_pred CCCEEEEECCCCCHHHHHHH---HHcCCE---EEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC
Confidence 45699999999999998872 222666 479999999999999987 4556778887664
No 136
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=91.01 E-value=0.24 Score=45.01 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=44.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHHh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLSL 344 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~l 344 (433)
..++|||.||.|++++-|...+ ..|.+ +.++|+++.+++..+.|.. .+.++++|+.+++..
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~-~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~ 125 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLL-QPGAR---LLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQ 125 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTS-CTTCE---EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhC-CCCCE---EEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHH
Confidence 4589999999999998772211 12555 4799999999988887642 257889999876543
No 137
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=90.94 E-value=0.2 Score=43.07 Aligned_cols=52 Identities=23% Similarity=0.173 Sum_probs=43.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 337 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~d 337 (433)
...++||+-||.|.++.-| ...+.+ +.++|+++.+.+..+.+.++..+++.|
T Consensus 17 ~~~~vLDiG~G~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~v~~~~~d 68 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYL----LEFATK---LYCIDINVIALKEVKEKFDSVITLSDP 68 (170)
T ss_dssp CCEEEEEETCTTCTTHHHH----HTTEEE---EEEECSCHHHHHHHHHHCTTSEEESSG
T ss_pred CCCeEEEECCCCCHHHHHH----HhhcCe---EEEEeCCHHHHHHHHHhCCCcEEEeCC
Confidence 4568999999999999877 444433 589999999999999998888888777
No 138
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=90.90 E-value=0.26 Score=46.93 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhh-cCCCeEeeEEEeecCHhhHHHHHHc-------CCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGAS-LSGVKLVTRWAIDINPHACKSLKFN-------HPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~-~aG~~~~t~~avD~d~~A~~t~~~N-------~p~~~v~~~di~d~~ 342 (433)
...++||+-||.|.++.-|.. . ..+.. +.++|+++.+++..+.+ .+++.+++.|++++.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~--~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQ--ELKPFEQ---IIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHH--HSSCCSE---EEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred CCCEEEEECCCCCHHHHHHHH--hCCCCCE---EEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 467999999999999988721 1 24555 47999999988888776 566788889988754
No 139
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=90.87 E-value=0.27 Score=45.00 Aligned_cols=56 Identities=14% Similarity=0.150 Sum_probs=42.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d 340 (433)
...++|||.||.|.++.-|. ...| .. +.++|+++.+++..+.|. +++.++.+|+.+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la---~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~ 133 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA---DIADKGI---VYAIEYAPRIMRELLDACAERENIIPILGDANK 133 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH---HHTTTSE---EEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC
T ss_pred CCCEEEEEcccCCHHHHHHH---HHcCCcE---EEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC
Confidence 34589999999999988772 3445 23 589999999998877764 345677788776
No 140
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=90.87 E-value=0.16 Score=46.20 Aligned_cols=56 Identities=18% Similarity=0.136 Sum_probs=41.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~ 341 (433)
..++||++||.|.++.-|. ...| .. +.++|+++.+++..+.|. ++..+++.|+.+.
T Consensus 74 ~~~vLDlG~G~G~~~~~la---~~~~~~~~---v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~ 134 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVS---DIVGWEGK---IFGIEFSPRVLRELVPIVEERRNIVPILGDATKP 134 (227)
T ss_dssp TCEEEEETTTSTTHHHHHH---HHHCTTSE---EEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG
T ss_pred CCEEEEEeccCCHHHHHHH---HHhCCCeE---EEEEECCHHHHHHHHHHHhccCCCEEEEccCCCc
Confidence 4589999999999998772 2322 34 579999997776665543 5667888888764
No 141
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=90.72 E-value=0.13 Score=49.54 Aligned_cols=56 Identities=20% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~ 341 (433)
..-++||+-||.|.++..| ...|.+ +.++|+++.+++..+.+.. +..++++|+.++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L----~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKL----LEKAKK---VVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp TTCEEEEECCTTSTTHHHH----HHHSSE---EEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CCCEEEEEcCcccHHHHHH----HhhCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3458999999999999988 334555 4799999999998888753 356788888764
No 142
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=90.70 E-value=0.28 Score=45.12 Aligned_cols=59 Identities=14% Similarity=0.102 Sum_probs=44.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
..++||+.||.|.++.-|.. ...+.+ +.++|+++.+++..+.|+ +.+.++++|+.+++.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~--~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 136 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFAS--ISDDIH---VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE 136 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHT--TCTTCE---EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH
T ss_pred CCEEEEEeCchhHHHHHHHH--hCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 45899999999999988721 113445 579999999888887774 246788999987654
No 143
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=90.68 E-value=0.36 Score=48.68 Aligned_cols=59 Identities=17% Similarity=0.055 Sum_probs=46.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC-------------CceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE-------------TKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~-------------~~v~~~di~d~~~ 343 (433)
..-++|+|++|.|++..-+ ...+.. .+.+||+|+.+++..+.|+|. ..++.+|+.+++.
T Consensus 188 ~pkrVL~IGgG~G~~arel----lk~~~~--~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~ 259 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEI----VKLKPK--MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLK 259 (364)
T ss_dssp TTCEEEEEECTTCHHHHHH----HTTCCS--EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHH
T ss_pred CCCEEEEEECChhHHHHHH----HHCCCC--EEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHH
Confidence 3569999999999988755 233432 357999999999999999872 4678899988875
No 144
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=90.65 E-value=0.25 Score=44.07 Aligned_cols=53 Identities=17% Similarity=0.184 Sum_probs=43.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCC-eEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGV-KLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~-~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| |+ + +.++|+++.+++..+.+.++..+++.|+.++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~ 89 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------PYPQ---KVGVEPSEAMLAVGRRRAPEATWVRAWGEAL 89 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------CCSE---EEEECCCHHHHHHHHHHCTTSEEECCCTTSC
T ss_pred CCCeEEEECCCCCHhHHhC-------CCCe---EEEEeCCHHHHHHHHHhCCCcEEEEcccccC
Confidence 4569999999999887633 66 5 4799999999999999987777888887654
No 145
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=90.64 E-value=0.26 Score=44.34 Aligned_cols=56 Identities=13% Similarity=0.011 Sum_probs=42.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----------CCceeecChh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----------ETKVRNEAAD 339 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----------~~~v~~~di~ 339 (433)
...++||+-||.|.++.-| ...|-.. .+.++|+++.+++..+.+.+ ...+++.|+.
T Consensus 29 ~~~~vLDiGcG~G~~~~~l----~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLL----LKDKSFE-QITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp TCCEEEEETCTTCHHHHHH----HTSTTCC-EEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHH----HhcCCCC-EEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 3459999999999999887 4444211 25799999999999988864 4567777764
No 146
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=90.63 E-value=0.12 Score=49.86 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=45.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCe--EeeEEEeecCHhhHHHHHHc-CCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVK--LVTRWAIDINPHACKSLKFN-HPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~--~~t~~avD~d~~A~~t~~~N-~p~~~v~~~di~d~~ 342 (433)
..-++||+-||.|.++..|. ..|.. . .+.++|+|+.+++..+.| .++..++++|+.++.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La----~~~~~~~~-~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~ 103 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVI----ARLATPGS-PLHAVELDRDLIGRLEQRFGELLELHAGDALTFD 103 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHH----HHHCBTTB-CEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCC
T ss_pred CcCEEEEEccccHHHHHHHH----HhCCCcCC-eEEEEECCHHHHHHHHHhcCCCcEEEECChhcCC
Confidence 34589999999999999882 22333 1 147999999999999888 345678999998754
No 147
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.54 E-value=0.22 Score=47.14 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=35.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 329 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p 329 (433)
.-.|||+|||.|-..... ...|-+. .++|+++.+++.-+.|..
T Consensus 213 ~~~vlD~f~GsGtt~~~a----~~~gr~~---ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVA----KKLGRNF---IGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp TCEEEESSCTTCHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH----HHcCCeE---EEEeCCHHHHHHHHHHHH
Confidence 448999999999877654 6778774 699999999998887754
No 148
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=90.53 E-value=0.28 Score=46.73 Aligned_cols=43 Identities=28% Similarity=0.313 Sum_probs=34.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeec-CHhhHHHHHHcC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDI-NPHACKSLKFNH 328 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~-d~~A~~t~~~N~ 328 (433)
..++|||.||.|.+++.+ ...|.. .+.++|+ ++.+++..+.|.
T Consensus 80 ~~~vLDlG~G~G~~~~~~----a~~~~~--~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVA----FLAGAD--QVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp TCEEEETTCTTSHHHHHH----HHTTCS--EEEEEECSCHHHHHHHHHHH
T ss_pred CCeEEEecccccHHHHHH----HHcCCC--EEEEEeCCCHHHHHHHHHHH
Confidence 458999999999999876 445652 2579999 899999888876
No 149
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=90.52 E-value=0.25 Score=44.48 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=41.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----------CCceeecChh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----------ETKVRNEAAD 339 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----------~~~v~~~di~ 339 (433)
...++||+-||.|.++.-| ...|-.. .+.++|+++.+++..+.|.. ...+++.|+.
T Consensus 29 ~~~~vLDiGcG~G~~~~~l----~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKIL----LKDSFFE-QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp TCCEEEEETCTTCHHHHHH----HHCTTCS-EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred CCCEEEEeCCCCCHHHHHH----HhhCCCC-EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3459999999999999887 3333211 25799999999999988854 4567777764
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=90.46 E-value=0.16 Score=47.18 Aligned_cols=47 Identities=23% Similarity=0.146 Sum_probs=34.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
...++||++||.|.+...+...+...+.+ +.++|+++.+++..+.|.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~---v~gvDis~~~l~~A~~~~ 97 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQ---VIASDVDPAPLELAAKNL 97 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEE---EEEEESCHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCe---EEEEECCHHHHHHHHHHH
Confidence 45799999999999988762110012344 589999999999888664
No 151
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=90.27 E-value=0.36 Score=43.67 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=43.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
..++||+.||.|.++.-|.. ... +.+ +.++|+++.+++..+.|+ +...++++|+.++..
T Consensus 70 ~~~vLdiG~G~G~~~~~la~--~~~~~~~---v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~ 135 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALAL--ALPADGR---VVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLD 135 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHT--TSCTTCE---EEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHH
Confidence 45899999999999987732 111 445 579999999888887764 345788899877643
No 152
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=90.27 E-value=0.25 Score=45.67 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=43.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc-C-CCeEeeEEEeecCHhhHHHHHHcC-----CC-CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL-S-GVKLVTRWAIDINPHACKSLKFNH-----PE-TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~-a-G~~~~t~~avD~d~~A~~t~~~N~-----p~-~~v~~~di~d~ 341 (433)
...++||+.||.|+++..|. .. . +.. +.++|+++.+++..+.|. ++ +.+++.|+.+.
T Consensus 93 ~~~~vldiG~G~G~~~~~l~---~~~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLA---NIVGPEGR---VVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTSE---EEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred CCCEEEEecCCchHHHHHHH---HHhCCCeE---EEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 35589999999999998872 22 1 445 479999999988888774 34 67888888754
No 153
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=90.20 E-value=0.22 Score=47.16 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=41.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc--CCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL--SGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~--aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d 340 (433)
...++||+.||.|+++.-|. .. .+.+ +.++|+++.+++..+.|. +++.+++.|+.+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la---~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 173 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYIL---YALNGKGT---LTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD 173 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHTTSSE---EEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred CcCEEEEecCCCCHHHHHHH---HHcCCCCE---EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc
Confidence 45699999999999998772 22 2555 479999999988887764 345677777765
No 154
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=90.15 E-value=0.26 Score=43.80 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=42.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
..++||+.||.|.++..|.. ...+.+ +.++|+++.+++..+.|. ++..+++.|+.++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~--~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 127 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSI--VRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF 127 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHH--HCTTSE---EEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS
T ss_pred CCeEEEECCCCCHHHHHHHH--HCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC
Confidence 45899999999999987721 223555 479999999998888763 3356778887764
No 155
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=90.14 E-value=0.18 Score=47.65 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=42.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
..++||+.||.|.++..|. ... +.. +.++|+++.+++..+.|. +...+++.|+.++
T Consensus 113 ~~~VLDiG~G~G~~~~~la---~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLA---RAVGSSGK---VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp TCEEEEECCTTSHHHHHHH---HHTTTTCE---EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred CCEEEEECCcCCHHHHHHH---HHhCCCcE---EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 4589999999999998772 332 345 579999999999888874 2456777887654
No 156
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=90.03 E-value=0.24 Score=45.87 Aligned_cols=56 Identities=18% Similarity=0.134 Sum_probs=41.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CC-CceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PE-TKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~-~~v~~~di~d 340 (433)
..++|||+||.|+++.-|.. ...+.+ +.++|+++.+++..+.|. .+ ..+++.|+.+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~--~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGA--TLNGWY---FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHH--HHHCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred CCEEEEeCCChhHHHHHHHH--hCCCCe---EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 45899999999999887621 223555 479999999998887764 22 5788888766
No 157
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=90.02 E-value=0.46 Score=45.99 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=45.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---------p~~~v~~~di~d~~~ 343 (433)
..++|||-||.|++..-+. +..+.. .+.+||+|+.+++..+.++ +...++.+|+.++..
T Consensus 96 ~~~VLdiG~G~G~~~~~l~---~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 163 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVL---RHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR 163 (304)
T ss_dssp CCEEEEEECTTSHHHHHHH---TCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHH---hCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH
Confidence 4589999999999998772 332332 2579999999999988877 456788999988763
No 158
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=89.99 E-value=0.32 Score=44.55 Aligned_cols=57 Identities=21% Similarity=0.120 Sum_probs=43.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC-----CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE-----TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~-----~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...+.. .+.++|+++.+++..+.+.+. ..+++.|+.++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l----~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 140 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRL----LLPLFR--EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF 140 (241)
T ss_dssp CCSEEEEETCTTTHHHHHT----TTTTCS--EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC
T ss_pred CCCEEEEECCCCCHHHHHH----HHhcCC--EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc
Confidence 4569999999999998876 334432 257999999999999988764 35677777654
No 159
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=89.90 E-value=0.41 Score=44.50 Aligned_cols=55 Identities=22% Similarity=0.205 Sum_probs=43.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.+... .+++.|+.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~ 108 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFL----QERGFE---VVLVDPSKEMLEVAREKGVK-NVVEAKAEDL 108 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH----HTTTCE---EEEEESCHHHHHHHHHHTCS-CEEECCTTSC
T ss_pred CCCeEEEeCCCcCHHHHHH----HHcCCe---EEEEeCCHHHHHHHHhhcCC-CEEECcHHHC
Confidence 3458999999999999877 445776 47999999999999988764 3677777654
No 160
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=89.89 E-value=0.39 Score=43.12 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=44.1
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
..++||+.||.|..+..|.. ... |.+ +.++|+++.+++..+.|+. .+.++++|+.+++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~--~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 122 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFAR--AISISSR---VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA 122 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHT--TSCTTCE---EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT
T ss_pred CCEEEEEcCCccHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc
Confidence 45899999999999988732 111 555 4799999999988887753 25678888887653
No 161
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=89.88 E-value=0.28 Score=45.04 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=43.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++..| ...|.. +.++|+++.+++..+.+. ++..++..|++++
T Consensus 21 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAF----SPYVQE---CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL 81 (239)
T ss_dssp TTCEEEEESCTTSHHHHHH----GGGSSE---EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC
T ss_pred CCCEEEEEccCcCHHHHHH----HHhCCE---EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC
Confidence 4569999999999999877 444545 579999999888877653 4567778887654
No 162
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=89.85 E-value=0.47 Score=46.51 Aligned_cols=58 Identities=21% Similarity=0.211 Sum_probs=45.1
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCCC---------CceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHPE---------TKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p~---------~~v~~~di~d~~~ 343 (433)
..++||+-||.|+++..+. +.. +.+ +.++|+++.+++..+.|++. ..++++|+.++..
T Consensus 117 ~~~VLdiG~G~G~~~~~l~---~~~~~~~---v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~ 184 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELC---KYKSVEN---IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 184 (321)
T ss_dssp CCEEEEEECTTCHHHHHHT---TCTTCCE---EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHH---HcCCCCE---EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh
Confidence 3589999999999998772 332 334 57999999999999998753 4678899887653
No 163
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=89.81 E-value=0.16 Score=48.48 Aligned_cols=53 Identities=15% Similarity=0.238 Sum_probs=43.3
Q ss_pred cEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC--------CceeecChhhH
Q 013949 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE--------TKVRNEAADDF 341 (433)
Q Consensus 282 ~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~--------~~v~~~di~d~ 341 (433)
++|||-||.|.++.-| ...|.+ +.++|+++.+++..+.+.+. +.+++.|+.++
T Consensus 85 ~vLDlGcG~G~~~~~l----~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPF----LDLGWE---VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp CEEEETCTTTTTHHHH----HTTTCC---EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred cEEEEeccCCHHHHHH----HHcCCe---EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 8999999999999887 455776 47999999999988887543 46788888764
No 164
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=89.79 E-value=0.24 Score=43.94 Aligned_cols=54 Identities=22% Similarity=0.258 Sum_probs=41.8
Q ss_pred cEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 282 ~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
++||+-||.|.++.-|. ...|.+ +.++|+++.+++..+.+. +...+++.|+.++
T Consensus 46 ~vLdiG~G~G~~~~~l~---~~~~~~---v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALA---KQSDFS---IRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI 105 (219)
T ss_dssp EEEEETCTTSHHHHHHH---HHSEEE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC
T ss_pred EEEEECCCCCHHHHHHH---HcCCCe---EEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC
Confidence 99999999999998772 234555 579999999988888773 3456788887664
No 165
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=89.72 E-value=0.28 Score=44.91 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=39.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhH----HHHHHcCCCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHAC----KSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~----~t~~~N~p~~~v~~~di~d~ 341 (433)
..++|||.||.|+++.-|. ...| .. +.++|+++.++ +..+.| ++..+++.|+.+.
T Consensus 78 ~~~vLDlG~G~G~~~~~la---~~~g~~~~---v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~ 138 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVS---DIVGPDGL---VYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHP 138 (233)
T ss_dssp TCEEEEECCTTSHHHHHHH---HHHCTTCE---EEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCG
T ss_pred CCEEEEEcccCCHHHHHHH---HHhCCCcE---EEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCCh
Confidence 4589999999999998873 3322 34 57999997654 334444 6677888998774
No 166
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=89.70 E-value=0.29 Score=45.03 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-|. ... +.+ +.++|+++.+++..+.|. +...+++.|+.++
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~---~~~~~~~~---v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLA---RAVGEKGL---VESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTSE---EEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred CCCEEEEECCCcCHHHHHHH---HHhCCCCE---EEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 34599999999999998772 221 455 479999999988887763 4456778888765
No 167
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=89.70 E-value=0.3 Score=45.53 Aligned_cols=57 Identities=14% Similarity=0.069 Sum_probs=43.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+-||.|.+..-|. ...+.+ +.++|+++.+++..+.+. +.+.+++.|+.++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la---~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLA---GHVTGQ---VTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHH---TTCSSE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCCEEEEeCCCCCHHHHHHH---hccCCE---EEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 45699999999999998872 333335 479999999888887764 3467888888664
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=89.69 E-value=0.24 Score=45.67 Aligned_cols=60 Identities=12% Similarity=0.064 Sum_probs=44.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-------~~~v~~~di~d~~~ 343 (433)
..++||+.||.|.+++.|..++ ..|.+ +.++|+++.+.+..+.|+. .+.++++|+.+++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~-~~~~~---v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~ 123 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGL-ADNTT---LTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS 123 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHS-CTTSE---EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG
T ss_pred CCCEEEEcCCchHHHHHHHHhC-CCCCE---EEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH
Confidence 4589999999999998873211 12455 4699999998888877752 35788889888764
No 169
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=89.66 E-value=0.4 Score=43.92 Aligned_cols=54 Identities=22% Similarity=0.205 Sum_probs=44.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
...++||+-||.|.+..-| ...|.++ .++|+++.+.+..+.+ ..+++.|+.+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~---~~~~~~d~~~~~ 94 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELC----KEEGIES---IGVDINEDMIKFCEGK---FNVVKSDAIEYL 94 (240)
T ss_dssp TCSCEEEETCTTTHHHHHH----HHHTCCE---EEECSCHHHHHHHHTT---SEEECSCHHHHH
T ss_pred CCCeEEEEeCCCCHHHHHH----HhCCCcE---EEEECCHHHHHHHHhh---cceeeccHHHHh
Confidence 3468999999999999877 4447774 7999999999998888 667888988875
No 170
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=89.58 E-value=0.27 Score=47.75 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=43.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----------CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----------ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----------~~~v~~~di~d~~ 342 (433)
.-++|||-||.|++..-+. +..+.. .+.+||+|+.+++..+.|++ ...++.+|+.+++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~---~~~~~~--~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l 151 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVT---RHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV 151 (294)
T ss_dssp CCEEEEESCTTCHHHHHHH---TCTTCC--EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--
T ss_pred CCEEEEEeCChhHHHHHHH---hCCCCC--EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH
Confidence 4589999999999998772 333433 25799999999999888753 4678888887765
No 171
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=89.52 E-value=0.42 Score=45.01 Aligned_cols=57 Identities=16% Similarity=0.040 Sum_probs=44.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---------CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---------PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---------p~~~v~~~di~d~~ 342 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+++..+.|. +...+...|+.++.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIML----VEEGFS---VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp TCCEEEETTCTTSHHHHHH----HHTTCE---EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred CCCEEEEecCCCCHHHHHH----HHCCCe---EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 3568999999999999887 455776 479999999998887653 34567788888775
No 172
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=89.46 E-value=0.37 Score=49.62 Aligned_cols=59 Identities=17% Similarity=0.152 Sum_probs=44.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc--------------CCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN--------------HPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N--------------~p~~~v~~~di~d~~ 342 (433)
..-++|||-||.|.+.+.+ |...|..- +++||+++.+++.-+.| .+.+.++++|+.++.
T Consensus 173 ~gd~VLDLGCGtG~l~l~l---A~~~g~~k--VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQV---AAATNCKH--HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp TTCEEEEESCTTSHHHHHH---HHHCCCSE--EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred CCCEEEEeCCCCCHHHHHH---HHHCCCCE--EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 4568999999999999876 24467652 58999999877766653 245688999997654
No 173
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=89.36 E-value=0.24 Score=45.40 Aligned_cols=57 Identities=16% Similarity=0.035 Sum_probs=44.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d~ 341 (433)
...++||+-||.|.++..| ...|.. .+.++|+++.+++..+.+.. ...+++.|+.++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l----~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 152 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNL----LTKLYA--TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA 152 (254)
T ss_dssp CCSEEEEETCTTTHHHHHT----HHHHCS--EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC
T ss_pred CCCEEEEECCCcCHHHHHH----HHhhcC--EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC
Confidence 4569999999999999876 333433 25799999999999998874 456777887764
No 174
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=89.35 E-value=0.46 Score=45.08 Aligned_cols=60 Identities=20% Similarity=0.210 Sum_probs=43.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~ 341 (433)
+.-++|||=||.|.++.-|...+...|+++ .++|+++.+++.-+.+.. .+.++++|+.++
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v---~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~ 135 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKI---IAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI 135 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEE---EEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEE---EEEECCHHHHHHHHHHHHhhccCceEEEeecccccc
Confidence 355899999999999987732222357774 699999998888776632 346788888765
No 175
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=89.17 E-value=0.28 Score=49.61 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC------------------------------------CeEeeEEEeecCHhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG------------------------------------VKLVTRWAIDINPHACK 322 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG------------------------------------~~~~t~~avD~d~~A~~ 322 (433)
....+||+|||.|++.+-+.+ ..++ ... .++++|+|+.|++
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~--~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~-~V~GvDid~~al~ 277 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL--IGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL-NIIGGDIDARLIE 277 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH--HHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC-CEEEEESCHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH--HhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc-eEEEEECCHHHHH
Confidence 346899999999998865421 1111 112 2689999999999
Q ss_pred HHHHcC-----C-CCceeecChhhHH
Q 013949 323 SLKFNH-----P-ETKVRNEAADDFL 342 (433)
Q Consensus 323 t~~~N~-----p-~~~v~~~di~d~~ 342 (433)
.-+.|. . .+.+.+.|+.++.
T Consensus 278 ~Ar~Na~~~gl~~~I~~~~~D~~~~~ 303 (393)
T 3k0b_A 278 IAKQNAVEAGLGDLITFRQLQVADFQ 303 (393)
T ss_dssp HHHHHHHHTTCTTCSEEEECCGGGCC
T ss_pred HHHHHHHHcCCCCceEEEECChHhCC
Confidence 998884 2 2568888887754
No 176
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=89.08 E-value=0.27 Score=47.22 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-|. ...|.+ +.++|+++.+++..+.|. +.+.+++.|+.++
T Consensus 117 ~~~~vLDiGcG~G~~~~~la---~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 179 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAH---RRFGSR---VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT 179 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHHCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCCEEEEecCCCCHHHHHHH---HHcCCE---EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC
Confidence 45689999999999998772 222766 479999999888877763 2356788888654
No 177
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=88.98 E-value=0.57 Score=45.56 Aligned_cols=59 Identities=14% Similarity=0.146 Sum_probs=44.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---------~~~v~~~di~d~~~ 343 (433)
..++|||.||.|++..-+. +..+.. .+.+||+|+.+++..+.|++ ...++++|+.+++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~---~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~ 163 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVV---KHPSVE--SVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK 163 (304)
T ss_dssp CCEEEEEECTTSHHHHHHT---TCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCEEEEECCCchHHHHHHH---HcCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh
Confidence 3589999999999998772 222322 25799999999998888753 45788999988754
No 178
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=88.95 E-value=0.03 Score=52.41 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=43.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~~ 342 (433)
..-++||+.||.|+++.-| ...|.+ +.++|+++.+++..+.|. ++..++++|+.++.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l----~~~~~~---v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~ 88 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKL----AKISKQ---VTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQ 88 (245)
T ss_dssp SSEEEEECSCCCSSCSHHH----HHHSSE---EEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTT
T ss_pred CCCEEEEEeCCCCHHHHHH----HHhCCe---EEEEECCHHHHHHHHHHhccCCceEEEECChhhcC
Confidence 3458999999999999887 334555 579999999888777765 34577888887664
No 179
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.72 E-value=0.37 Score=48.36 Aligned_cols=55 Identities=24% Similarity=0.214 Sum_probs=41.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCCC--------CceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHPE--------TKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p~--------~~v~~~di~d 340 (433)
..++|||+||.|.++.-+. ... +.+ +.++|+++.+++..+.|... +.++..|+.+
T Consensus 223 ~~~VLDlGcG~G~~s~~la---~~~p~~~---V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL---DKNPQAK---VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH---HHCTTCE---EEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred CCeEEEEeCcchHHHHHHH---HHCCCCE---EEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 4699999999999998872 222 555 47999999999888877531 3447777755
No 180
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=88.43 E-value=0.51 Score=43.86 Aligned_cols=57 Identities=14% Similarity=0.261 Sum_probs=46.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc-CCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL-SGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~-aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.+..-|. .. .|.. +.++|+++.+.+..+.+.++..+...|+.++
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~---~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~ 142 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA---DALPEIT---TFGLDVSKVAIKAAAKRYPQVTFCVASSHRL 142 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH---HTCTTSE---EEEEESCHHHHHHHHHHCTTSEEEECCTTSC
T ss_pred CCCEEEEECCCCCHHHHHHH---HhCCCCe---EEEEeCCHHHHHHHHHhCCCcEEEEcchhhC
Confidence 45689999999999888772 22 2666 4799999999999999998888888887654
No 181
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=88.40 E-value=0.52 Score=42.69 Aligned_cols=53 Identities=9% Similarity=0.093 Sum_probs=41.3
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDF 341 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~ 341 (433)
.++||+.||.|.++.-| ... .+ +.++|+++.+++..+.+. +...+++.|+.++
T Consensus 35 ~~vLdiG~G~G~~~~~l----~~~-~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 91 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLL----ADH-YE---VTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL 91 (243)
T ss_dssp CEEEEESCTTCHHHHHH----TTT-SE---EEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC
T ss_pred CeEEEecCCCCHHHHHH----hhC-Ce---EEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc
Confidence 58999999999999877 333 44 579999999888877664 4567888888765
No 182
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=88.39 E-value=0.23 Score=44.54 Aligned_cols=57 Identities=19% Similarity=0.218 Sum_probs=42.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|. ... +.. +.++|+++.+++..+.+. ++..+++.|+.++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~---~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 100 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLS---KMVGEKGK---VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI 100 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHH---HHHTTTCE---EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC
T ss_pred CCCEEEEEecCCCHHHHHHH---HHhCCCcE---EEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC
Confidence 35699999999999998772 222 244 579999999888887764 4566777877654
No 183
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=88.35 E-value=0.42 Score=43.90 Aligned_cols=57 Identities=23% Similarity=0.263 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|. ...|..+ .++|+++.+++..+.+. ++..+++.|+.++
T Consensus 36 ~~~~VLDiGcG~G~~~~~la---~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWA---RDHGITG---TGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHH---HHTCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred CCCEEEEECCCCCHHHHHHH---HhcCCeE---EEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 45699999999999988772 3346664 79999999888887664 2456777887664
No 184
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=88.33 E-value=0.26 Score=45.30 Aligned_cols=57 Identities=18% Similarity=0.184 Sum_probs=42.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-----C-CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-----E-TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-----~-~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|. ...+.+ +.++|+++.+++..+.|.. + ..+++.|+.++
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~---~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLA---DYVKGQ---ITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHCCSE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCCeEEEeCCCCCHHHHHHH---HhCCCe---EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 34599999999999998872 333334 5799999999988777643 2 56778888654
No 185
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=88.26 E-value=0.32 Score=46.58 Aligned_cols=59 Identities=17% Similarity=0.150 Sum_probs=44.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC------CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE------TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~------~~v~~~di~d~ 341 (433)
...++||+-||.|.++..|.. +...|.+ +.++|+++.+++..+.|... ..+++.|+.++
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~-~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 182 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDY-SACPGVQ---LVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL 182 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCC-TTCTTCE---EEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHH-hcCCCCe---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC
Confidence 356899999999998886610 1223555 47999999999999988753 46788888765
No 186
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=88.24 E-value=0.38 Score=43.95 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=41.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d 340 (433)
..++||+.||.|.++.-+. .. +.+ +.++|+++.+.+..+.|. +...+++.|+.+
T Consensus 92 ~~~vldiG~G~G~~~~~l~---~~-~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 151 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLS---EV-AGE---VWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD 151 (248)
T ss_dssp TCEEEEECCTTSHHHHHHH---HH-SSE---EEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT
T ss_pred CCEEEEeCCCccHHHHHHH---Hh-CCE---EEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh
Confidence 4589999999999988772 33 555 479999999998888774 344666777755
No 187
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=88.01 E-value=0.5 Score=40.59 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=39.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc-CCCeEeeEEEeecCHhhHHHHHHcC-----C-CCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL-SGVKLVTRWAIDINPHACKSLKFNH-----P-ETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~-aG~~~~t~~avD~d~~A~~t~~~N~-----p-~~~v~~~di~d 340 (433)
...++||+.||.|.++.-+. .. .+.+ +.++|+++.+++..+.|. + .. +++.|+.+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~---~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWL---RSTPQTT---AVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHH---TTSSSEE---EEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred CCCeEEEeCCCCCHHHHHHH---HHCCCCe---EEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 45699999999999998772 22 2555 579999999988888763 2 23 56666643
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=88.01 E-value=0.78 Score=41.45 Aligned_cols=56 Identities=13% Similarity=0.057 Sum_probs=41.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC------CeEeeEEEeecCHhhHHHHHHc----------CCCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG------VKLVTRWAIDINPHACKSLKFN----------HPETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG------~~~~t~~avD~d~~A~~t~~~N----------~p~~~v~~~di~d 340 (433)
...++||+.||.|.++.-|. ...| .+ +.++|+++.+++..+.| .++..+++.|+.+
T Consensus 80 ~~~~VLdiG~G~G~~~~~la---~~~~~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMA---IKMNVLENKNSY---VIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ 151 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHTTTTTCTTCE---EEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG
T ss_pred CCCEEEEECCCCCHHHHHHH---HHhcccCCCCCE---EEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh
Confidence 34699999999999988773 3333 34 57999999988887776 3456777888765
No 189
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=87.99 E-value=0.31 Score=45.73 Aligned_cols=57 Identities=18% Similarity=0.184 Sum_probs=42.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC------CceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE------TKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~------~~v~~~di~d~ 341 (433)
...++||+.||.|+++.-| ...|.. .+.++|+++.+++..+.+.+. ..+++.|+.++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l----~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 126 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKY----ERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR 126 (298)
T ss_dssp TTCEEEEETCTTTTTHHHH----HHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS
T ss_pred CCCeEEEECCCCCHHHHHH----HHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc
Confidence 3569999999999988876 334652 257999999999988887543 35677777665
No 190
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=87.87 E-value=0.27 Score=49.55 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=42.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC------------------------------------CeEeeEEEeecCHhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG------------------------------------VKLVTRWAIDINPHACK 322 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG------------------------------------~~~~t~~avD~d~~A~~ 322 (433)
...++||+|||.|++.+.+.+ ..++ ... .++++|+|+.|++
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~--~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~-~V~GvDid~~ai~ 271 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAM--IGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF-KIYGYDIDEESID 271 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHH--HHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC-CEEEEESCHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH--HHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc-eEEEEECCHHHHH
Confidence 356899999999998876522 1111 112 3689999999999
Q ss_pred HHHHcCC------CCceeecChhhHH
Q 013949 323 SLKFNHP------ETKVRNEAADDFL 342 (433)
Q Consensus 323 t~~~N~p------~~~v~~~di~d~~ 342 (433)
.-+.|.. .+.+.+.|+.++.
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~l~ 297 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQFK 297 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGGCC
T ss_pred HHHHHHHHcCCCCceEEEECChhhcC
Confidence 9988842 2467778887654
No 191
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=87.86 E-value=0.58 Score=43.76 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=42.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcC--------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNH--------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~--------p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-|. ... +.. +.++|+++.+++..+.|. ++..+++.|+.+.
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~---~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLL---RAVGPAGQ---VISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTSE---EEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred CCCEEEEEcccccHHHHHHH---HHhCCCCE---EEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 34589999999999998772 222 445 479999999988887763 3456777887654
No 192
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=87.84 E-value=0.43 Score=47.68 Aligned_cols=57 Identities=14% Similarity=0.232 Sum_probs=40.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~ 342 (433)
...++|||.||.|.++.-+ ..+|.. .+.++|++ .+++..+.|. +.+.++++|++++.
T Consensus 63 ~~~~VLDlGcGtG~ls~~l----a~~g~~--~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWS----AQAGAR--KVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS 125 (376)
T ss_dssp TTCEEEEESCTTTHHHHHH----HHTTCS--EEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred CCCEEEEeccCcCHHHHHH----HhcCCC--EEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC
Confidence 3568999999999999877 556763 25799999 6666555543 12578888887653
No 193
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=87.59 E-value=0.41 Score=47.13 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=39.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
..++||+-||.|.++.-+ ..+|.. .+.++|+++ +++..+.|. +...+++.|+.++
T Consensus 65 ~~~VLDiGcGtG~ls~~l----a~~g~~--~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFA----AKAGAK--KVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV 125 (340)
T ss_dssp TCEEEEETCTTSHHHHHH----HHTTCS--EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred CCEEEEeeccCcHHHHHH----HHcCCC--EEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh
Confidence 458999999999998876 445653 258999996 555555542 3456777877654
No 194
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=87.53 E-value=0.52 Score=49.79 Aligned_cols=58 Identities=19% Similarity=0.301 Sum_probs=47.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---C--CCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---P--ETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p--~~~v~~~di~d~~~ 343 (433)
..++|||+=||.|-++..| ...|..+ .+||+.+.++++-+.+. + ++.+++.+++++..
T Consensus 66 ~~~~vLDvGCG~G~~~~~l----a~~ga~V---~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~ 128 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSL----ASKGATI---VGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIA 128 (569)
T ss_dssp SCCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHH
T ss_pred CCCeEEEECCCCcHHHHHH----HhCCCEE---EEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhh
Confidence 5689999999999999988 6679884 59999999888766543 2 34788999998854
No 195
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=87.52 E-value=0.3 Score=46.59 Aligned_cols=57 Identities=21% Similarity=0.282 Sum_probs=43.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~ 341 (433)
...++||+-||.|+++.-|. ...|.+ +.++|+++.+++..+.+.+ .+.+++.|+.++
T Consensus 72 ~~~~vLDiGcG~G~~~~~la---~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAV---AEYDVN---VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF 134 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHHCCE---EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC
T ss_pred CcCEEEEeeccCcHHHHHHH---HhCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc
Confidence 45699999999999998772 333766 4799999998888877643 356888888776
No 196
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=87.37 E-value=0.51 Score=43.03 Aligned_cols=58 Identities=9% Similarity=0.052 Sum_probs=43.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~ 342 (433)
..++||+.||.|.++.-|.. ...|.+ +.++|+++.+++..+.|+ +.+.+++.|+.++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~--~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 118 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQ--ALPEAT---IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLG 118 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHH--HCTTCE---EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSH
T ss_pred CCEEEEecCCCcHHHHHHHH--HCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHH
Confidence 45899999999999987732 112455 479999999988888774 23567888888754
No 197
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=87.31 E-value=0.93 Score=44.76 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=45.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcCC---------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNHP---------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~p---------~~~v~~~di~d~~~ 343 (433)
..++|||-||.|+++.-|. +..+ .+ +.+||+++.+++..+.|++ ...++++|+.+++.
T Consensus 121 ~~~VLdIG~G~G~~a~~la---~~~~~~~---V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVA---RHASIEQ---IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 188 (334)
T ss_dssp CCEEEEETCSSSHHHHHHT---TCTTCCE---EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH
T ss_pred CCEEEEECCCccHHHHHHH---HcCCCCE---EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH
Confidence 3589999999999998772 2223 34 5799999999999888763 45788999988753
No 198
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=87.02 E-value=0.97 Score=43.22 Aligned_cols=59 Identities=22% Similarity=0.260 Sum_probs=45.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---------~~~v~~~di~d~~~ 343 (433)
..++|||-||.|++..-+. +..+.. .+.+||+|+.+++..+.|++ ...++++|+.++..
T Consensus 79 ~~~VLdiG~G~G~~~~~l~---~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELC---KYKSVE--NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 146 (283)
T ss_dssp CCEEEEEECTTSHHHHHHT---TCTTCC--EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCeEEEEeCCcCHHHHHHH---HcCCCC--EEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH
Confidence 3589999999999998762 222322 25799999999999998875 34688899988754
No 199
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=86.87 E-value=0.26 Score=48.37 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=41.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAAD 339 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~ 339 (433)
...++||++||.|++.+.+..-.... |-.. .++++|+++.+++..+.|.. ...++++|+-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~-~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l 194 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDV-HASGVDVDDLLISLALVGADLQRQKMTLLHQDGL 194 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEE-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTT
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCc-eEEEEECCHHHHHHHHHHHHhCCCCceEEECCCC
Confidence 45799999999999998773211110 1122 36899999999998888732 4567777764
No 200
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=86.85 E-value=0.71 Score=41.68 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=40.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcC----------CCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNH----------PETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~----------p~~~v~~~di~d 340 (433)
...++||+.||.|+++.-|. ...| .+ +.++|+++.+++..+.|. ++..+++.|+.+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la---~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA---RMVGCTGK---VIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHHCTTCE---EEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred CCCEEEEEcCCcCHHHHHHH---HHhCCCcE---EEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 45699999999999998772 3334 34 579999999888877663 245677777753
No 201
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=86.69 E-value=1.1 Score=43.64 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=44.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcC----------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNH----------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~----------p~~~v~~~di~d~~~ 343 (433)
..++|||-||.|++..-+. +.. +.+ +.+||+|+.+++..+.|+ |...++++|+.+++.
T Consensus 78 ~~~VLdiG~G~G~~~~~l~---~~~~~~~---v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVL---KHPTVEK---AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE 146 (314)
T ss_dssp CCEEEEEECTTSHHHHHHT---TSTTCCE---EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH
T ss_pred CCeEEEEcCCcCHHHHHHH---hcCCCCE---EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH
Confidence 3589999999999998762 222 334 579999999998888775 345788999988754
No 202
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=86.67 E-value=0.57 Score=43.30 Aligned_cols=56 Identities=16% Similarity=0.161 Sum_probs=41.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...+.+ +.++|+++.+++..+.+. ++..++..|++++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l----~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l 97 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAF----APFVKK---VVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM 97 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH----GGGSSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC
T ss_pred CCCEEEEEeCCCCHHHHHH----HHhCCE---EEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC
Confidence 4569999999999999877 334444 579999998888777653 5567778887654
No 203
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=86.53 E-value=0.59 Score=43.53 Aligned_cols=58 Identities=21% Similarity=0.232 Sum_probs=43.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+-||.|.+..-|.. ...+.. +.++|+++.+++..+.+. ++..++..|+.++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~--~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAK--NNPDAE---ITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL 99 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHH--HCTTSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC
T ss_pred CCCeEEEecCCCCHHHHHHHH--hCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC
Confidence 456999999999999987721 222555 479999998888877763 4567778888764
No 204
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=86.28 E-value=0.78 Score=43.03 Aligned_cols=57 Identities=19% Similarity=0.241 Sum_probs=43.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+-||.|+++.-|. ...|.+ +.++|+++.+++..+.+. +...++..|+.++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~---~~~~~~---v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAV---EKYDVN---VVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHHCCE---EEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred CcCEEEEECCcccHHHHHHH---HHcCCE---EEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 45699999999999998772 244766 479999999888887763 2456778887654
No 205
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=86.17 E-value=0.71 Score=45.54 Aligned_cols=55 Identities=15% Similarity=0.198 Sum_probs=38.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHH----HcC-CC-CceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLK----FNH-PE-TKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~----~N~-p~-~~v~~~di~d~ 341 (433)
..++||+-||.|.++.-+ ..+|..- +.++|+++ +++..+ .|. ++ +.++++|++++
T Consensus 67 ~~~VLDvGcG~G~~~~~l----a~~g~~~--v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 127 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFA----AKAGARK--VIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV 127 (349)
T ss_dssp TCEEEEESCTTSHHHHHH----HHTTCSE--EEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred CCEEEEEeccchHHHHHH----HHCCCCE--EEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc
Confidence 458999999999999877 4457632 58999996 444443 332 22 56778887765
No 206
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=86.14 E-value=1.1 Score=39.76 Aligned_cols=54 Identities=19% Similarity=0.221 Sum_probs=43.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.+ +.++|+++.+.+..+.+.. .+++.|+.++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l----~~~~~~---~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~ 85 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAI----KENGTR---VSGIEAFPEAAEQAKEKLD--HVVLGDIETM 85 (230)
T ss_dssp TCSEEEEETCTTSHHHHHH----HTTTCE---EEEEESSHHHHHHHHTTSS--EEEESCTTTC
T ss_pred CCCcEEEeCCCCCHHHHHH----HhcCCe---EEEEeCCHHHHHHHHHhCC--cEEEcchhhc
Confidence 4569999999999999877 334755 5799999999999988875 4677777653
No 207
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=85.87 E-value=0.81 Score=42.87 Aligned_cols=54 Identities=20% Similarity=0.088 Sum_probs=41.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecCh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAA 338 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di 338 (433)
.-+++|+-||.|-++..+ ...|-.. .++|+|+++.|++.-+.|.- .+.++.+|.
T Consensus 16 g~~VlDIGtGsG~l~i~l----a~~~~~~-~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~ 75 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIEL----VERGQIK-SAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANG 75 (225)
T ss_dssp TEEEEEETCSTTHHHHHH----HHTTSEE-EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred CCEEEEeCCCcHHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECch
Confidence 458999999999999987 4556442 37899999999999888731 245777776
No 208
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=85.85 E-value=0.67 Score=43.36 Aligned_cols=59 Identities=15% Similarity=0.054 Sum_probs=44.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
.-++||+.||.|..++-|.. ... |.+ +.++|+++.+.+..+.|+. .+.++++|+.+++.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~--~~~~~~~---v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 145 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATAL--AIPEDGK---ILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLD 145 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHH--HSCTTCE---EEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred cCEEEEeCCCcCHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHH
Confidence 44899999999999987732 212 555 4799999998888887753 34688899987654
No 209
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=85.81 E-value=1 Score=44.32 Aligned_cols=59 Identities=10% Similarity=0.109 Sum_probs=46.9
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-----CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-----ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-----~~~v~~~di~d~~~ 343 (433)
.+++|+|-||.|++..-|.. ...+.++ .+||+|+..++.-+.+++ ...++++|+.+++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~--~~p~~~v---~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~ 153 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFAD--VYPQSRN---TVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAE 153 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHH--HSTTCEE---EEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHH
T ss_pred CCEEEEEECCcCHHHHHHHH--HCCCcEE---EEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHh
Confidence 46999999999999887621 1356664 699999999999999875 34788999988864
No 210
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=85.53 E-value=0.83 Score=40.36 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=40.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc----CCCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN----HPETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N----~p~~~v~~~di~d~ 341 (433)
..++||+-||.|.+++.+ +...|.+ +.++|+++.+++..+.+ .++..+++.|+.++
T Consensus 24 ~~~vLDiGcG~G~~~~~~---~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 83 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSI---FVEDGYK---TYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL 83 (209)
T ss_dssp CSEEEEESCCSSSCTHHH---HHHTTCE---EEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC
T ss_pred CCEEEEECCCCCHHHHHH---HHhCCCE---EEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC
Confidence 468999999988765443 1446776 47999999888877665 35567888888754
No 211
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=85.48 E-value=0.56 Score=44.46 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=43.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d~ 341 (433)
.-++||+=||.|.++. + .. |-+. .+.++|+|+.+++..+.|+. +..++++|+.++
T Consensus 22 ~~~VLEIG~G~G~lt~-l----~~-~~~~-~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-P----VG-ERLD-QLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTF 79 (252)
T ss_dssp TCCEEEECCTTTTTHH-H----HH-TTCS-CEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGC
T ss_pred cCEEEEECCCCcHHHH-h----hh-CCCC-eEEEEECCHHHHHHHHHHhccCCceEEEECchhhC
Confidence 4589999999999999 7 33 2231 14799999999999999874 457888998764
No 212
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=85.25 E-value=1.1 Score=41.52 Aligned_cols=58 Identities=10% Similarity=0.148 Sum_probs=42.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHH-----------cCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF-----------NHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~-----------N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.+...|. ....+.. +.++|+++.+++.-+. ..+++.+++.|+.++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la--~~~p~~~---v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~ 114 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELS--PLFPDTL---ILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH 114 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHG--GGSTTSE---EEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC
T ss_pred CCCeEEEEccCCcHHHHHHH--HHCCCCe---EEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh
Confidence 45689999999999998872 1223455 4799999988765542 245567889999873
No 213
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=85.25 E-value=0.72 Score=44.12 Aligned_cols=57 Identities=19% Similarity=0.234 Sum_probs=42.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~ 341 (433)
...++||+-||.|+++.-|. ...|.+ +.++|+++.+++..+.+.. ...+++.|+.++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la---~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAV---ERFDVN---VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF 152 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHHCCE---EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC
T ss_pred CcCEEEEEcccchHHHHHHH---HHCCCE---EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC
Confidence 45689999999999988772 222776 4799999999888877642 356777887664
No 214
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=85.15 E-value=1.1 Score=43.71 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=44.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcCCC---------CceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNHPE---------TKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~p~---------~~v~~~di~d~~~ 343 (433)
..++|||-||.|++..-+. +..+ .+ +.+||+|+.+++..+.|++. ..++.+|+.+++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~---~~~~~~~---v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~ 176 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVL---KHESVEK---VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK 176 (314)
T ss_dssp CCEEEEESCTTSHHHHHHT---TCTTCCE---EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH
T ss_pred CCEEEEEcCCcCHHHHHHH---HcCCCCE---EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH
Confidence 3489999999999998772 2223 34 57999999999999988753 4678889887653
No 215
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=84.79 E-value=0.51 Score=45.94 Aligned_cols=59 Identities=19% Similarity=0.160 Sum_probs=42.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC----------------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH----------------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~----------------p~~~v~~~di~d~ 341 (433)
...++||+.||.|.++.-|. ...|-.. .++++|+++.+++..+.|. +++.+++.|+.++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la---~~~g~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLS---KAVGSQG-RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 179 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTC-EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred CCCEEEEeCCCcCHHHHHHH---HHhCCCc-eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHc
Confidence 34589999999999998772 2224211 2579999999988887764 2456778887654
No 216
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=84.71 E-value=0.83 Score=41.89 Aligned_cols=58 Identities=12% Similarity=0.019 Sum_probs=43.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC--CCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS--GVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a--G~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
..++||+.||.|.++.-|. ... +.+ +.++|+++.+++..+.|+. .+.+++.|+.++..
T Consensus 61 ~~~VLdiG~G~G~~~~~la---~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFA---SALPEDGK---ILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQ 126 (239)
T ss_dssp CSEEEEECCTTCHHHHHHH---HHSCTTCE---EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHH---HhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHH
Confidence 4589999999999998772 222 445 4799999999888877741 25678889877543
No 217
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=84.70 E-value=0.98 Score=42.91 Aligned_cols=56 Identities=11% Similarity=-0.044 Sum_probs=42.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d 340 (433)
.-+++|+-||.|-++..| ...|-.. .++|+|+++.|++.-+.|.- .+.++++|.-+
T Consensus 22 g~~VlDIGtGsG~l~i~l----a~~~~~~-~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFA----VKNQTAS-FAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp SEEEEEETCSTTHHHHHH----HHTTSEE-EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCEEEEECCccHHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 458999999999999987 4556432 37899999999999988831 24677777543
No 218
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=84.58 E-value=0.35 Score=45.17 Aligned_cols=60 Identities=20% Similarity=0.096 Sum_probs=42.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
.-++||+.||.|+.++-|..++ ..|.. +.++|+++.+.+..+.|+ +.+.++++|+.+++.
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~-~~~~~---v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 126 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLAL-PDDGQ---VITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLH 126 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTS-CTTCE---EEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred cCEEEEeeCCcCHHHHHHHHhC-CCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 4589999999999998873211 12445 479999987665555543 246788999987754
No 219
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=84.53 E-value=0.32 Score=48.49 Aligned_cols=52 Identities=12% Similarity=0.061 Sum_probs=38.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhc--CCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASL--SGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~--aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
..++||+.||.|++.+.+. +. .+.. +.++|+++.|++.. ++..++++|+.++
T Consensus 40 ~~~vLD~gcGtG~~~~~~~---~~~~~~~~---i~gvDi~~~~~~~a----~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFR---EAHGTAYR---FVGVEIDPKALDLP----PWAEGILADFLLW 93 (421)
T ss_dssp TCEEEEETCTTCHHHHHHH---HHHCSCSE---EEEEESCTTTCCCC----TTEEEEESCGGGC
T ss_pred CCEEEECCCCChHHHHHHH---HHhCCCCe---EEEEECCHHHHHhC----CCCcEEeCChhhc
Confidence 3499999999999998872 22 3445 57999999887654 4557888887654
No 220
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=84.49 E-value=0.66 Score=43.81 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=42.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc-C-CCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL-S-GVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~-a-G~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|. .. . |.+ +.++|+++.+.+..+.+.. +..++..|+.++
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~---~~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 84 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLM---PLLPEGSK---YTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI 84 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHT---TTSCTTCE---EEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC
T ss_pred CCCeEEEecCCCCHHHHHHH---HhCCCCCE---EEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc
Confidence 45699999999999998772 22 1 456 4799999999888877643 456777887754
No 221
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=84.39 E-value=1.1 Score=41.02 Aligned_cols=60 Identities=17% Similarity=0.067 Sum_probs=43.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~~~ 343 (433)
..++||+-||.|.++.-|..++ ..+.+ +.++|+++.+++..+.|+ +.+.++.+|+.+++.
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~-~~~~~---v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~ 138 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQL-PPDGQ---IIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLE 138 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTS-CTTCE---EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHhC-CCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 3489999999999988773211 01445 479999999888887765 235678899877643
No 222
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=84.32 E-value=0.49 Score=45.32 Aligned_cols=57 Identities=16% Similarity=0.042 Sum_probs=41.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------------CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------------ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------------~~~v~~~di~d~ 341 (433)
...++||+-||.|+++.-|. ...+.. +.++|+++.+++..+.+++ ...+++.|+.++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~---~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 102 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWK---KGRINK---LVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKE 102 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHH---HTTCSE---EEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTS
T ss_pred CCCEEEEECCCCcHHHHHHH---hcCCCE---EEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEeccccc
Confidence 35689999999999988772 222344 5799999998887776542 346778888765
No 223
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=84.28 E-value=1.1 Score=41.46 Aligned_cols=44 Identities=18% Similarity=0.046 Sum_probs=35.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
.-++|||=||.|.+++.+.. ...+.. +||+|+|+.+++.-+.|.
T Consensus 50 ~~~VLDlGCG~GplAl~l~~--~~p~a~---~~A~Di~~~~leiar~~~ 93 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWN--ENEKII---YHAYDIDRAEIAFLSSII 93 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHC--SSCCCE---EEEECSCHHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHh--cCCCCE---EEEEeCCHHHHHHHHHHH
Confidence 55999999999999998721 112443 799999999999999885
No 224
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=84.23 E-value=0.39 Score=47.80 Aligned_cols=55 Identities=16% Similarity=0.107 Sum_probs=42.1
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC-----CCceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP-----ETKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p-----~~~v~~~di~d 340 (433)
.-++||++ |.|.++..+ ...|... .+.++|+++.+++..+.|.. ++.++++|+.+
T Consensus 173 ~~~VLDlG-G~G~~~~~l----a~~~~~~-~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~ 232 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIAL----MLSGLPK-RIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRK 232 (373)
T ss_dssp TCEEEEES-CTTCHHHHH----HHHTCCS-EEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTS
T ss_pred CCEEEEEC-CCCHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhh
Confidence 45899999 999999877 3344311 25799999999998888743 46788888877
No 225
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=84.14 E-value=0.83 Score=44.18 Aligned_cols=59 Identities=15% Similarity=0.109 Sum_probs=42.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~ 341 (433)
...++||+.||.|+++.-|. ...+-.. .+.++|+++.+++..+.|. ++..+++.|+.+.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la---~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMS---RVVGEKG-LVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTC-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred CcCEEEEecCCchHHHHHHH---HhcCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 45699999999999988772 2222111 2579999999988887763 4467788888764
No 226
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=84.08 E-value=0.75 Score=43.39 Aligned_cols=57 Identities=21% Similarity=0.161 Sum_probs=42.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC------CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH------PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~------p~~~v~~~di~d~ 341 (433)
...++||+-||.|.+..-|. ...|.+ +.++|+++.+++..+.+. +...+++.|+.++
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~---~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLV---RKFGVS---IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHHCCE---EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred CCCEEEEeCCCCCHHHHHHH---HHhCCE---EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 45699999999999998772 223666 479999999888777654 3456777877654
No 227
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=83.91 E-value=0.57 Score=47.30 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=42.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC------------------------------------CeEeeEEEeecCHhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG------------------------------------VKLVTRWAIDINPHACK 322 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG------------------------------------~~~~t~~avD~d~~A~~ 322 (433)
..-.++|+|||.|++.+-..+ ..++ ... .++++|+|+.|++
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~--~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~-~v~GvDid~~al~ 270 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAM--IGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL-DISGFDFDGRMVE 270 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHH--HHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC-CEEEEESCHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHH--HhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc-eEEEEECCHHHHH
Confidence 356899999999998865421 1111 112 2689999999999
Q ss_pred HHHHcCC------CCceeecChhhHH
Q 013949 323 SLKFNHP------ETKVRNEAADDFL 342 (433)
Q Consensus 323 t~~~N~p------~~~v~~~di~d~~ 342 (433)
.-+.|.- .+.+.+.|+.++.
T Consensus 271 ~Ar~Na~~~gl~~~I~~~~~D~~~l~ 296 (384)
T 3ldg_A 271 IARKNAREVGLEDVVKLKQMRLQDFK 296 (384)
T ss_dssp HHHHHHHHTTCTTTEEEEECCGGGCC
T ss_pred HHHHHHHHcCCCCceEEEECChHHCC
Confidence 9988842 2467888887764
No 228
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=83.91 E-value=1.1 Score=42.11 Aligned_cols=56 Identities=20% Similarity=0.001 Sum_probs=42.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADD 340 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d 340 (433)
.-+++|+-||.|-++..+ ...|-.. .++|+|+++.|.+.-+.|.- .+.++++|.-+
T Consensus 22 g~~VlDIGtGsG~l~i~l----a~~~~~~-~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFL----LQMGYCD-FAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp TEEEEEETCSTTHHHHHH----HHTTCEE-EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCEEEEECCchHHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 468999999999999987 4456432 37899999999999988841 24677777644
No 229
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=83.74 E-value=1.1 Score=44.20 Aligned_cols=56 Identities=16% Similarity=0.263 Sum_probs=37.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHH----cC--CCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF----NH--PETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~----N~--p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-+ ..+|.. .+.++|+++. ++..+. |. +...+++.|++++
T Consensus 50 ~~~~VLDiGcGtG~ls~~l----a~~g~~--~V~~vD~s~~-~~~a~~~~~~~~l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFA----AQAGAR--KIYAVEASTM-AQHAEVLVKSNNLTDRIVVIPGKVEEV 111 (348)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCS--EEEEEECSTH-HHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred CcCEEEEcCCCccHHHHHH----HhCCCC--EEEEECCHHH-HHHHHHHHHHcCCCCcEEEEEcchhhC
Confidence 3458999999999999876 445653 2589999973 333333 32 3456777777654
No 230
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=83.68 E-value=0.82 Score=44.59 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=37.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc----C--CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN----H--PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N----~--p~~~v~~~di~d~ 341 (433)
..++||+-||.|.++.-+ ..+|.. .+.++|+++ +++..+.| . +...+++.|+.++
T Consensus 39 ~~~VLDiGcGtG~ls~~l----a~~g~~--~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 99 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFA----AKHGAK--HVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV 99 (328)
T ss_dssp TCEEEEETCTTSHHHHHH----HHTCCS--EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS
T ss_pred CCEEEEecCccHHHHHHH----HHCCCC--EEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhc
Confidence 348999999999998866 445753 258999994 55544443 2 2346777777654
No 231
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=83.63 E-value=0.76 Score=41.75 Aligned_cols=56 Identities=16% Similarity=0.206 Sum_probs=41.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCC-------eEeeEEEeecCHhhHHHHHHcC----------CCCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGV-------KLVTRWAIDINPHACKSLKFNH----------PETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~-------~~~t~~avD~d~~A~~t~~~N~----------p~~~v~~~di~d 340 (433)
...++||+.||.|.++.-|. ...|. . +.++|+++.+.+..+.|. ++..+++.|+.+
T Consensus 84 ~~~~VLdiG~G~G~~~~~la---~~~~~~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 156 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFY---RYIKAKGVDADTR---IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK 156 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHHHHSCCCTTCE---EEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG
T ss_pred CCCEEEEECCCccHHHHHHH---HhcccccCCccCE---EEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc
Confidence 34699999999999998773 32332 4 579999999888777663 345677777765
No 232
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=83.42 E-value=0.54 Score=43.80 Aligned_cols=55 Identities=15% Similarity=0.204 Sum_probs=42.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| ...|.++ .++|+++.+.+..+.+. +..++..|++++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~ 88 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVAL----ANQGLFV---YAVEPSIVMRQQAVVHP-QVEWFTGYAENL 88 (261)
T ss_dssp TTCEEEEETCTTSHHHHHH----HTTTCEE---EEECSCHHHHHSSCCCT-TEEEECCCTTSC
T ss_pred CCCEEEEEcCcccHHHHHH----HhCCCEE---EEEeCCHHHHHHHHhcc-CCEEEECchhhC
Confidence 4569999999999999887 4467664 79999998877655554 566777777654
No 233
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=83.12 E-value=1.1 Score=42.15 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=44.2
Q ss_pred CCCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---CCceeecChhhHH
Q 013949 278 EPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---ETKVRNEAADDFL 342 (433)
Q Consensus 278 ~~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---~~~v~~~di~d~~ 342 (433)
++..++|||-||.|.++.-|. ..-|-.- .++|+|+++.+.+.++.+.. +...+..|+.+..
T Consensus 76 kpG~~VldlG~G~G~~~~~la---~~VG~~G-~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~ 139 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMS---DIIGPRG-RIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE 139 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCTTC-EEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG
T ss_pred CCCCEEEEecCcCCHHHHHHH---HHhCCCc-eEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc
Confidence 356799999999999998773 3334332 26899999999998887754 4455666665543
No 234
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=82.69 E-value=1.2 Score=44.33 Aligned_cols=58 Identities=14% Similarity=0.094 Sum_probs=45.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc--CCCeEeeEEEeecCHhhHHHHHHcC-------------CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL--SGVKLVTRWAIDINPHACKSLKFNH-------------PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~--aG~~~~t~~avD~d~~A~~t~~~N~-------------p~~~v~~~di~d~~ 342 (433)
...++|||-||.|.++.-|. .. .+.. +.++|+++.+++..+.|. +++.+++.|+.++.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la---~~~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~ 155 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLAS---KLVGEHGK---VIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA 155 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHHTTTCE---EEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG
T ss_pred CCCEEEEecCccCHHHHHHH---HHhCCCCE---EEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh
Confidence 45699999999999988772 22 3555 479999999999988773 56778888887763
No 235
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=82.67 E-value=1.2 Score=41.76 Aligned_cols=59 Identities=12% Similarity=0.140 Sum_probs=39.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHH---HHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSL---KFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~---~~N~p~~~v~~~di~d~ 341 (433)
+..++|||-||.|+++.-+. ...|-.- .++|+|+++.+.+.+ ....++..++++|+...
T Consensus 76 ~g~~VLDlG~GtG~~t~~la---~~v~~~G-~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~ 137 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVS---DIIELNG-KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFP 137 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHHTTTS-EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCG
T ss_pred CCCEEEEEeecCCHHHHHHH---HHhCCCC-EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccc
Confidence 45799999999999988762 2222111 258999999775333 12235667788888754
No 236
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=82.58 E-value=1.2 Score=41.15 Aligned_cols=59 Identities=15% Similarity=-0.072 Sum_probs=44.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhHHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDFLS 343 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~~~ 343 (433)
.-++||+-||.|+.++-|.. ... +.+ +.++|+++.+.+..+.|+. .+.++++|+.+++.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~--~~~~~~~---v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~ 136 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTAL--SIPDDGK---ITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALD 136 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHH--HSCTTCE---EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHH--hCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 45899999999999987732 212 455 4799999999988887753 24688899887754
No 237
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=82.41 E-value=1.3 Score=45.50 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=31.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSL 324 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~ 324 (433)
...++|||-||.|.++..| |...|.. .++++|+++.+++.-
T Consensus 242 ~g~~VLDLGCGsG~la~~L---A~~~g~~--~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQA---ALECGCA--LSFGCEIMDDASDLT 282 (433)
T ss_dssp TTCEEEEESCTTSHHHHHH---HHHHCCS--EEEEEECCHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHH---HHHCCCC--EEEEEeCCHHHHHHH
Confidence 4568999999999999887 2334543 258999999887665
No 238
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=82.31 E-value=0.97 Score=39.82 Aligned_cols=51 Identities=14% Similarity=0.004 Sum_probs=36.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcC---CCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLS---GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~a---G~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++|||-||.|+++.-|. ... +.. +.++|+++.+ ..+++.+++.|+.+.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~---~~~~~~~~~---v~gvD~s~~~------~~~~v~~~~~d~~~~ 75 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVIL---ERTKNYKNK---IIGIDKKIMD------PIPNVYFIQGEIGKD 75 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHH---HHTTTSCEE---EEEEESSCCC------CCTTCEEEECCTTTT
T ss_pred CCCEEEEeCCCCCHHHHHHH---HHcCCCCce---EEEEeCCccC------CCCCceEEEccccch
Confidence 34689999999999998772 333 344 5799999853 245667788887654
No 239
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=82.13 E-value=2 Score=41.79 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=44.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC--CCCceeecChhhHHHh
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH--PETKVRNEAADDFLSL 344 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~--p~~~v~~~di~d~~~l 344 (433)
.-.+||.-+|.||-|..|. +. +.. ++++|.|+.|++.-+. . +...+++.+..++...
T Consensus 23 gg~~VD~T~G~GGHS~~il---~~-~g~---VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGIL---ER-GGR---VIGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRH 81 (285)
T ss_dssp TCEEEETTCTTSHHHHHHH---HT-TCE---EEEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHH
T ss_pred CCEEEEeCCCCcHHHHHHH---HC-CCE---EEEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHH
Confidence 3489999999999999983 33 545 5899999999988877 5 3457888888877543
No 240
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=82.07 E-value=0.58 Score=44.36 Aligned_cols=53 Identities=25% Similarity=0.244 Sum_probs=41.9
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
-++|||=||.|.++..| ...|.++ .++|+++.+++..+ .+|++.+++.|++++
T Consensus 41 ~~vLDvGcGtG~~~~~l----~~~~~~v---~gvD~s~~ml~~a~-~~~~v~~~~~~~e~~ 93 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGL----AEFFERV---HAVDPGEAQIRQAL-RHPRVTYAVAPAEDT 93 (257)
T ss_dssp SEEEEESCTTTTTHHHH----HTTCSEE---EEEESCHHHHHTCC-CCTTEEEEECCTTCC
T ss_pred CCEEEEcCCCCHHHHHH----HHhCCEE---EEEeCcHHhhhhhh-hcCCceeehhhhhhh
Confidence 47999999999999888 5667774 69999998887654 457777788887654
No 241
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=82.02 E-value=1.2 Score=38.94 Aligned_cols=50 Identities=14% Similarity=-0.024 Sum_probs=36.2
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC----------CeEeeEEEeecCHhhHHHHHHcCCCCcee-ecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG----------VKLVTRWAIDINPHACKSLKFNHPETKVR-NEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG----------~~~~t~~avD~d~~A~~t~~~N~p~~~v~-~~di~d~ 341 (433)
..++|||.||.|+++.-|. ...| .. +.++|+++.+ ..+.+.++ ..|+.+.
T Consensus 23 ~~~vLDlGcG~G~~~~~la---~~~~~~~~~~~~~~~~---v~~vD~s~~~------~~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAV---QKVNAAGTDPSSPVGF---VLGVDLLHIF------PLEGATFLCPADVTDP 83 (196)
T ss_dssp TCEEEEETCCSCHHHHHHH---HHTTTTCCCTTSCCCE---EEEECSSCCC------CCTTCEEECSCCTTSH
T ss_pred CCEEEEeCCCCCHHHHHHH---HHhccccccccCCCce---EEEEechhcc------cCCCCeEEEeccCCCH
Confidence 4589999999999999873 3334 34 5799999853 23556777 7887644
No 242
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=81.80 E-value=1.6 Score=40.28 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=42.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-|. ...|.+ +.++|+++.+++..+.+.. ...+++.|+.++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~---~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLA---TARDVR---VTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHSCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCCEEEEeCCCCCHHHHHHH---HhcCCE---EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 45699999999999998772 334666 4799999998887776632 356777777654
No 243
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=81.73 E-value=0.94 Score=44.33 Aligned_cols=45 Identities=13% Similarity=0.276 Sum_probs=36.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~ 331 (433)
.-.|||.|||.|..... |...|-+. .++|+++.+++.-+.+....
T Consensus 253 ~~~VlDpF~GsGtt~~a----a~~~gr~~---ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLV----AERESRKW---ISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp TCEEEETTCTTCHHHHH----HHHTTCEE---EEEESCHHHHHHHHGGGSCS
T ss_pred CCEEEECCCCCCHHHHH----HHHcCCCE---EEEeCCHHHHHHHHHHHHhc
Confidence 34799999999976654 47789875 69999999999999887644
No 244
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=81.68 E-value=1.4 Score=40.11 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=37.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHH---HcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLK---FNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~---~N~p~~~v~~~di~d~ 341 (433)
...++|||-||.|.++.-|. ...| .. ++++|+++.+++... ...++..++.+|+.+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la---~~~~~~~---V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~ 117 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA---DIVDEGI---IYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP 117 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH---HHTTTSE---EEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG
T ss_pred CCCEEEEECCcCCHHHHHHH---HHcCCCE---EEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCc
Confidence 34589999999999887662 3333 23 589999998654322 2234555667777654
No 245
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=81.36 E-value=1.3 Score=49.36 Aligned_cols=57 Identities=18% Similarity=0.199 Sum_probs=44.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC---CeEeeEEEeecCHhhHHHHHH-----------cCCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG---VKLVTRWAIDINPHACKSLKF-----------NHPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG---~~~~t~~avD~d~~A~~t~~~-----------N~p~~~v~~~di~d~~ 342 (433)
...++|||-||.|.+...| ...| .+ +.++|+++.+++..+. +.+++.++++|+.++.
T Consensus 721 ~g~rVLDVGCGTG~lai~L----Ar~g~p~a~---VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp 791 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSL----LDYPTSLQT---IIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD 791 (950)
T ss_dssp CCSEEEEETCSSSHHHHHH----TSSCCCCCE---EEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC
T ss_pred CCCEEEEECCCCCHHHHHH----HHhCCCCCe---EEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC
Confidence 4569999999999999887 4444 45 5799999999988876 3355678888887643
No 246
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=81.15 E-value=1.3 Score=39.52 Aligned_cols=55 Identities=18% Similarity=0.246 Sum_probs=40.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAAD 339 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~ 339 (433)
...++||+-||.|.++.-|. ...| .+ +.++|+++.+++..+.|. ++..+++.|+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~---~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTA---EIVGEDGL---VVSIERIPELAEKAERTLRKLGYDNVIVIVGDGT 138 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTSE---EEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGG
T ss_pred CCCEEEEECCCccHHHHHHH---HHhCCCCE---EEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence 35599999999999988773 3333 44 579999999888877764 34567777764
No 247
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=80.94 E-value=1.1 Score=40.95 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=40.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecCh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAA 338 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di 338 (433)
...++||+.||.|.++.-|. ...|.+ +.++|+++.+++..+.|. ++..++..|+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la---~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 149 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALIS---EIVKTD---VYTIERIPELVEFAKRNLERAGVKNVHVILGDG 149 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHH---HHHCSC---EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred CCCEEEEEeCCcCHHHHHHH---HHhCCE---EEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc
Confidence 34589999999999988773 333334 579999999888887764 2456677776
No 248
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=80.87 E-value=1.5 Score=44.23 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=39.3
Q ss_pred cEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCH---hhHHHHHHcCC--CCceeecChhhH
Q 013949 282 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINP---HACKSLKFNHP--ETKVRNEAADDF 341 (433)
Q Consensus 282 ~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~---~A~~t~~~N~p--~~~v~~~di~d~ 341 (433)
+|||+=||.|.+|+=. ..+|..- |+|||.++ .|.+..+.|.- .+.++++|++++
T Consensus 86 ~VLDvG~GtGiLs~~A----a~aGA~~--V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~ 144 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFC----AQAGARR--VYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETV 144 (376)
T ss_dssp EEEEETCTTSHHHHHH----HHTTCSE--EEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred EEEEeCCCccHHHHHH----HHhCCCE--EEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeee
Confidence 7999999999998733 6688763 68999985 44555566642 246788888765
No 249
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=80.40 E-value=1 Score=41.91 Aligned_cols=46 Identities=20% Similarity=0.237 Sum_probs=36.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~ 330 (433)
...++|||-||.|+++.-| ...|..- ++++|+++.+++.-+.|.+.
T Consensus 37 ~g~~VLDiGcGtG~~t~~l----a~~g~~~--V~gvDis~~ml~~a~~~~~~ 82 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVM----LQNGAKL--VYALDVGTNQLAWKIRSDER 82 (232)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCSE--EEEECSSCCCCCHHHHTCTT
T ss_pred CCCEEEEEccCCCHHHHHH----HhcCCCE--EEEEcCCHHHHHHHHHhCcc
Confidence 3458999999999999877 4457532 58999999998887777764
No 250
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=80.08 E-value=1.2 Score=40.91 Aligned_cols=58 Identities=16% Similarity=0.013 Sum_probs=39.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhH-HH---HHH-----cCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHAC-KS---LKF-----NHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~-~t---~~~-----N~p~~~v~~~di~d~ 341 (433)
..-++||+-||.|.+..-|. ....|.. +.++|+++.++ +. -+. +.++..+++.|++++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la--~~~~~~~---v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l 90 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLA--INDQNTF---YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL 90 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHH--HTCTTEE---EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC
T ss_pred CCCEEEEEeccCcHHHHHHH--HhCCCCE---EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh
Confidence 44589999999999988771 1234555 47999995554 22 232 235567788888766
No 251
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=80.02 E-value=1 Score=41.35 Aligned_cols=46 Identities=13% Similarity=-0.052 Sum_probs=35.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~ 330 (433)
...++|||-||.|.++.-+ ...|.. .+.++|+++.+++..+.+.+.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l----~~~~~~--~v~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLS----ACESFT--EIIVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp CEEEEEEESCTTCCGGGTT----GGGTEE--EEEEEESCHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCccHHHHHH----hhcccC--eEEEecCCHHHHHHHHHHHhc
Confidence 3468999999999888765 455662 257999999999888777543
No 252
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=79.25 E-value=1.2 Score=46.22 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=37.6
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc----C--CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN----H--PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N----~--p~~~v~~~di~d~ 341 (433)
..++||+.||.|.+++-+ ...|.. .+.++|+++ +++..+.| . +.+.++++|+.++
T Consensus 159 ~~~VLDiGcGtG~la~~l----a~~~~~--~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~ 219 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFA----AQAGAR--KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV 219 (480)
T ss_dssp TCEEEEESCSTTHHHHHH----HHTTCS--EEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred CCEEEEecCcccHHHHHH----HHcCCC--EEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC
Confidence 458999999999998866 335542 257999998 55544443 2 3456777777653
No 253
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=79.03 E-value=2.1 Score=41.81 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=44.0
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----CCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----PETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p~~~v~~~di~d~~ 342 (433)
..-++||+=||.||++.-+ . ++..|.++ .++|+++.+++.-+.|. .+..++++|+.++.
T Consensus 122 ~g~rVLDIGcG~G~~ta~~-l-A~~~ga~V---~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGIL-L-SHVYGMRV---NVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID 185 (298)
T ss_dssp TTCEEEEECCCSSCHHHHH-H-HHTTCCEE---EEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG
T ss_pred CcCEEEEECCCccHHHHHH-H-HHccCCEE---EEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC
Confidence 4569999999999877433 1 34467774 69999999998887764 34578889988753
No 254
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=78.48 E-value=2.9 Score=38.42 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=43.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC----CCceeecChhhHHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP----ETKVRNEAADDFLS 343 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p----~~~v~~~di~d~~~ 343 (433)
...+|||+=||.|.++.-+ ...+.. .+.+||+++...+..+.+.. ...++.+|++++..
T Consensus 60 ~G~rVLdiG~G~G~~~~~~----~~~~~~--~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~ 122 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKV----QEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp TCEEEEEECCTTSHHHHHH----TTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG
T ss_pred CCCeEEEECCCccHHHHHH----HHhCCc--EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcc
Confidence 3569999999999988766 333322 36799999999998887754 23577888887753
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=78.45 E-value=1.2 Score=45.46 Aligned_cols=58 Identities=12% Similarity=-0.003 Sum_probs=40.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc-----------CCCeEeeEEEeecCHhhHHHHHHcC-----C--CCceeecChh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL-----------SGVKLVTRWAIDINPHACKSLKFNH-----P--ETKVRNEAAD 339 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~-----------aG~~~~t~~avD~d~~A~~t~~~N~-----p--~~~v~~~di~ 339 (433)
...+++|..||.|||.+.+..-+.. .+.. ++++|+++.+.+.-+.|. . ...++++|.-
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~---i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l 246 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKA---LHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSL 246 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTT---EEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTT
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeE---EEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCC
Confidence 3568999999999998876321111 1233 589999999988877763 1 3467777764
No 256
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=78.03 E-value=1.9 Score=38.73 Aligned_cols=49 Identities=12% Similarity=0.176 Sum_probs=38.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
..++||+-||.|.++..| ... .++|+++.+++..+.+ +..+++.|+.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l----~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~ 96 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPL----KIK-------IGVEPSERMAEIARKR--GVFVLKGTAENL 96 (219)
T ss_dssp SSCEEEETCTTSTTHHHH----TCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBC
T ss_pred CCcEEEeCCCCCHHHHHH----HHH-------hccCCCHHHHHHHHhc--CCEEEEcccccC
Confidence 458999999999998876 222 5999999999999888 456777777654
No 257
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=77.73 E-value=0.89 Score=38.33 Aligned_cols=52 Identities=21% Similarity=0.160 Sum_probs=37.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhc--CCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASL--SGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~--aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
...++||+.||.|+++.-+. .. .+.+ +.++|+++ +... ++..+++.|+.++.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~---~~~~~~~~---v~~~D~~~-~~~~-----~~~~~~~~d~~~~~ 75 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVV---TQIGGKGR---IIACDLLP-MDPI-----VGVDFLQGDFRDEL 75 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHH---HHHCTTCE---EEEEESSC-CCCC-----TTEEEEESCTTSHH
T ss_pred CCCeEEEeCCCCCHHHHHHH---HHhCCCCe---EEEEECcc-cccc-----CcEEEEEcccccch
Confidence 34599999999999998772 22 2455 47999999 5432 55678888887653
No 258
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=77.30 E-value=0.58 Score=43.45 Aligned_cols=59 Identities=10% Similarity=0.036 Sum_probs=41.3
Q ss_pred CCcEEecccchhHHHHhHhhhhh--cCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGAS--LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~--~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
.-++||+-||.|+++.-|..... ..+.+ +.++|+++.+++..+...+++.++++|+.++
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~---V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQ---VIGIDRDLSRCQIPASDMENITLHQGDCSDL 142 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCE---EEEEESCCTTCCCCGGGCTTEEEEECCSSCS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCE---EEEEeCChHHHHHHhccCCceEEEECcchhH
Confidence 34899999999999987732100 12445 5799999987665543345678889998875
No 259
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=77.13 E-value=1.4 Score=43.01 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=40.0
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcC----CCCceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNH----PETKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~----p~~~v~~~di~d~ 341 (433)
.-++|||.||.|.++.-+ ...| .+ +.++|+++.+++..+.|. ....++..|+.++
T Consensus 197 ~~~VLDlGcG~G~~~~~l----a~~~~~~~---v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAF----ARHSPKIR---LTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE 257 (343)
T ss_dssp CSBCCBTTCTTSHHHHHH----HHHCTTCB---CEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT
T ss_pred CCeEEEecCccCHHHHHH----HHHCCCCE---EEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc
Confidence 348999999999999877 3333 45 479999998888777664 3345677776543
No 260
>1ap0_A Modifier protein 1; chromatin-binding, protein interaction motif, alpha+beta; NMR {Mus musculus} SCOP: b.34.13.2 PDB: 1guw_A*
Probab=76.98 E-value=2 Score=33.05 Aligned_cols=42 Identities=19% Similarity=0.006 Sum_probs=30.9
Q ss_pred CCCCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceecC
Q 013949 386 DSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPFD 433 (433)
Q Consensus 386 i~~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~~ 433 (433)
++......|.||.|.+-... ...+.|.|.|+++. ..+|+|.+
T Consensus 6 ~~~~~~~ey~VE~Il~~r~~------~g~~~YlVKWkGy~~~~~TWEp~~ 49 (73)
T 1ap0_A 6 VLEEEEEEYVVEKVLDRRVV------KGKVEYLLKWKGFSDEDNTWEPEE 49 (73)
T ss_dssp SCCSCSSCCEEEEEEEEEEC------SSSEEEEEEEESSSSCCCEEEETT
T ss_pred cccCCCceEEEEEEEEEEEe------CCeEEEEEEECCCCCccCcEeeHH
Confidence 34444567799999887532 34689999999984 58999963
No 261
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=75.66 E-value=2.6 Score=40.05 Aligned_cols=46 Identities=17% Similarity=0.232 Sum_probs=35.1
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~ 330 (433)
..++||+-||.|.++..|.. ...+.. +.++|+++.+++..+.|...
T Consensus 47 ~~~VLDiGCG~G~~~~~la~--~~~~~~---v~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIAC--KWGPSR---MVGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHH--HTCCSE---EEEEESCHHHHHHHHHTC--
T ss_pred CCcEEEeCCCCCHHHHHHHH--HcCCCE---EEEECCCHHHHHHHHHHHHh
Confidence 45899999999999987721 223555 47999999999999988653
No 262
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=74.61 E-value=1.1 Score=35.40 Aligned_cols=41 Identities=17% Similarity=0.013 Sum_probs=29.7
Q ss_pred CCCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 387 SNVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 387 ~~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
+...++.|.||.|.+--. .....+.|.|.|+++. ..||+|.
T Consensus 17 ~~~~~e~yeVE~Ild~R~-----~~~g~~~YlVKWkGy~~~~~TWEp~ 59 (81)
T 4hae_A 17 QGASGDLYEVERIVDKRK-----NKKGKWEYLIRWKGYGSTEDTWEPE 59 (81)
T ss_dssp ECTTSCEEEEEEEEEEEE-----CTTSCEEEEEEETTCCGGGCEEEEG
T ss_pred cCCCCCEEEEEEEEEeEE-----CCCCeEEEEEEECCCCCCCCeEEeH
Confidence 355678899999987532 1123478999999984 4799996
No 263
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=73.32 E-value=2.9 Score=44.12 Aligned_cols=47 Identities=15% Similarity=0.198 Sum_probs=34.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN 327 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N 327 (433)
...+++|.+||+|||-+.+..-+...+ . ...+++|+++.+...-+.|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~-~-~~i~G~Eid~~~~~lA~~N 267 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQ-T-VVYFGQELNTSTYNLARMN 267 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTT-T-CEEEEEESCHHHHHHHHHH
T ss_pred CCCEEeecccchhHHHHHHHHHHHhcc-C-ceEEEEECcHHHHHHHHHH
Confidence 467999999999999887632111122 1 1368999999999988877
No 264
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=73.22 E-value=1.7 Score=41.26 Aligned_cols=54 Identities=9% Similarity=-0.110 Sum_probs=40.2
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC---------CCceeecChhhH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP---------ETKVRNEAADDF 341 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p---------~~~v~~~di~d~ 341 (433)
.++||+-||.|++..-+ +.. | . .+.+||+|+...+..+.+++ ...++.+|+.++
T Consensus 74 ~~VL~iG~G~G~~~~~l---l~~-~-~--~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~ 136 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQL---FKY-D-T--HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD 136 (262)
T ss_dssp CEEEEESSCCHHHHHHH---TTS-S-C--EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC
T ss_pred CEEEEEeCCcCHHHHHH---HhC-C-C--EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH
Confidence 48999999999999876 133 5 3 36799999999888877764 345667776543
No 265
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=72.08 E-value=2.9 Score=46.44 Aligned_cols=46 Identities=20% Similarity=0.233 Sum_probs=33.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHH--HHc
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSL--KFN 327 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~--~~N 327 (433)
...+++|.+||.|+|.+.+. ...+ .....++++|+++.|.... +.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA---~~l~ei~~~~IyGvEIDp~Al~LAK~RlN 369 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVS---AGFNNVMPRQIWANDIETLFLELLSIRLG 369 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHH---HTSTTCCGGGEEEECSCGGGHHHHHHHHH
T ss_pred CCCEEEECCCCccHHHHHHH---HHhcccCCCeEEEEECCHHHHHHHHHHHH
Confidence 35699999999999998762 2222 2112368999999998887 555
No 266
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=71.28 E-value=3.6 Score=39.69 Aligned_cols=43 Identities=16% Similarity=-0.089 Sum_probs=31.4
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
..++|||-||.|+...-+ +...|.. +.++|+++.+++.-+.+.
T Consensus 49 ~~~VLDlGCG~G~~l~~~---~~~~~~~---v~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKY---FYGEIAL---LVATDPDADAIARGNERY 91 (302)
T ss_dssp CCEEEETTCTTTTTHHHH---HHTTCSE---EEEEESCHHHHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHH---HhcCCCe---EEEEECCHHHHHHHHHHH
Confidence 468999999999866544 1223345 479999999888777654
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=71.10 E-value=4.1 Score=42.83 Aligned_cols=61 Identities=10% Similarity=-0.021 Sum_probs=40.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCC-------------eEeeEEEeecCHhhHHHHHHcC-----CC-----Cceee
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGV-------------KLVTRWAIDINPHACKSLKFNH-----PE-----TKVRN 335 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~-------------~~~t~~avD~d~~A~~t~~~N~-----p~-----~~v~~ 335 (433)
...+++|.+||+|||-+.+..-+...+- ....++++|+++.+...-+.|. .. ..+++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 4569999999999998876321111110 0113689999999999887762 22 45777
Q ss_pred cChh
Q 013949 336 EAAD 339 (433)
Q Consensus 336 ~di~ 339 (433)
+|.-
T Consensus 249 gDtL 252 (541)
T 2ar0_A 249 GNTL 252 (541)
T ss_dssp SCTT
T ss_pred CCCc
Confidence 7764
No 268
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=70.76 E-value=2.2 Score=41.36 Aligned_cols=44 Identities=18% Similarity=0.136 Sum_probs=35.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
.-++|||=||-|=+++.+. ...+-. ++|++|||+.+++..+.|.
T Consensus 133 p~~VLDLGCG~GpLAl~~~---~~~p~a--~y~a~DId~~~le~a~~~l 176 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWM---GLPAET--VYIASDIDARLVGFVDEAL 176 (281)
T ss_dssp CSEEEETTCTTGGGCCTTT---TCCTTC--EEEEEESBHHHHHHHHHHH
T ss_pred CceeeeeccCccHHHHHHH---hhCCCC--EEEEEeCCHHHHHHHHHHH
Confidence 4599999999999999772 233332 4799999999999999885
No 269
>1pdq_A Polycomb protein; methyllysine, chromodomain, polycomb, lysine methylation, trimethyllysine, cation-PI, chromo, structural protein; HET: M3L; 1.76A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=69.40 E-value=1.1 Score=34.77 Aligned_cols=40 Identities=18% Similarity=0.048 Sum_probs=28.8
Q ss_pred CCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEe--eeeeceecC
Q 013949 388 NVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLII--CYLTFVPFD 433 (433)
Q Consensus 388 ~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~--~~~~~~p~~ 433 (433)
......|.||.+.+--. .+..+.|.|.|+++ ...+|+|.+
T Consensus 15 ~~~~~eyeVEkIld~r~------~~g~~~YlVKWkGy~~~~nTWEP~e 56 (72)
T 1pdq_A 15 DPVDLVYAAEKIIQKRV------KKGVVEYRVKWKGWNQRYNTWEPEV 56 (72)
T ss_dssp ---CEEEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEGG
T ss_pred CCCCceEEEEEEEEEEE------eCCcEEEEEEECCCCCccCeecchH
Confidence 44557889999988753 23568999999998 457999963
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=68.97 E-value=2.9 Score=45.46 Aligned_cols=62 Identities=16% Similarity=0.271 Sum_probs=41.5
Q ss_pred CCCcEEecccchhHHHHhHhh-hhhc-CCC------------------------------------eEeeEEEeecCHhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCI-GASL-SGV------------------------------------KLVTRWAIDINPHA 320 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~-ga~~-aG~------------------------------------~~~t~~avD~d~~A 320 (433)
..-++||+|||.|++.+...+ ++.. .|+ .. .++++|+|+.|
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~-~i~G~Did~~a 268 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS-HFYGSDSDARV 268 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEESCHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc-cEEEEECCHHH
Confidence 346899999999999875422 1000 111 11 36899999999
Q ss_pred HHHHHHcCC-----C-CceeecChhhH
Q 013949 321 CKSLKFNHP-----E-TKVRNEAADDF 341 (433)
Q Consensus 321 ~~t~~~N~p-----~-~~v~~~di~d~ 341 (433)
++.-+.|-- + +.+.+.|+.++
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~ 295 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQL 295 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhC
Confidence 999988842 1 35677777664
No 271
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=67.12 E-value=7.2 Score=32.62 Aligned_cols=51 Identities=18% Similarity=0.122 Sum_probs=39.4
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+.+|+|-+...+...+...|+++ .++|.|+..++.++. .+..++.+|..+-
T Consensus 11 iIiG~G~~G~~la~~L~~~g~~v---~vid~~~~~~~~~~~--~g~~~i~gd~~~~ 61 (140)
T 3fwz_A 11 LLVGYGRVGSLLGEKLLASDIPL---VVIETSRTRVDELRE--RGVRAVLGNAANE 61 (140)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCE---EEEESCHHHHHHHHH--TTCEEEESCTTSH
T ss_pred EEECcCHHHHHHHHHHHHCCCCE---EEEECCHHHHHHHHH--cCCCEEECCCCCH
Confidence 46789988877766566789885 699999999998886 3566788888654
No 272
>3g7l_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, silencing, cell cycle, chromosome partition, DNA-binding, nucleus; HET: M3L; 2.20A {Schizosaccharomyces pombe}
Probab=66.75 E-value=2.2 Score=31.65 Aligned_cols=37 Identities=22% Similarity=0.142 Sum_probs=27.5
Q ss_pred CCcEEEEeccccccccCCCCCCCCCc-eEEEEEEEe--eeeeceec
Q 013949 390 PNEEFEVESLTAVCYGDPNKTKKPGV-YFKECCLII--CYLTFVPF 432 (433)
Q Consensus 390 ~P~~fvvENV~gi~~~~p~~~~~~gl-~~~v~w~~~--~~~~~~p~ 432 (433)
....|+||.+.+--. .+.++ .|.|.|+++ ...||+|.
T Consensus 4 ~~~ey~VE~Il~~r~------~~g~~~~YlVkWkGy~~~~~TWEp~ 43 (61)
T 3g7l_A 4 DADVYEVEDILADRV------NKNGINEYYIKWAGYDWYDNTWEPE 43 (61)
T ss_dssp -CCEEEEEEEEEEEE------CTTSCEEEEEEETTSCGGGCEEEEG
T ss_pred CCcEEEEEEEEEEEE------ECCCEEEEEEEEeCCCCcCCceeeH
Confidence 345789999888753 23455 899999998 45799995
No 273
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=66.24 E-value=0.84 Score=43.50 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=25.1
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPH 319 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~ 319 (433)
...++|||-||.||++.-+. .. | . +.+||+++-
T Consensus 74 ~g~~VLDlGcGtG~~s~~la---~~-~-~---V~gvD~s~m 106 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA---SR-P-H---VMDVRAYTL 106 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH---TS-T-T---EEEEEEECC
T ss_pred CCCEEEEeCcCCCHHHHHHH---Hc-C-c---EEEEECchh
Confidence 35689999999999998762 33 2 3 579999884
No 274
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=65.98 E-value=4.3 Score=39.68 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=33.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCH---hhHHHHHHcCCC
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINP---HACKSLKFNHPE 330 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~---~A~~t~~~N~p~ 330 (433)
.-.|||.|||.|..... |...|-+. .++|+++ ..++.-+.+...
T Consensus 243 ~~~vlDpF~GsGtt~~a----a~~~~r~~---ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 243 GSTVLDFFAGSGVTARV----AIQEGRNS---ICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp TCEEEETTCTTCHHHHH----HHHHTCEE---EEEESSTHHHHHHHHHHHHC--
T ss_pred CCEEEecCCCCCHHHHH----HHHcCCcE---EEEECCccHHHHHHHHHHHHHH
Confidence 34799999999976654 36678775 6999999 888887777643
No 275
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=65.19 E-value=1.1 Score=42.85 Aligned_cols=33 Identities=18% Similarity=0.081 Sum_probs=25.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPH 319 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~ 319 (433)
...++|||-||.||++.-+. .. | . +.+||+++-
T Consensus 82 ~g~~VLDlGcGtG~~s~~la---~~-~-~---V~gVD~s~m 114 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA---SQ-P-N---VREVKAYTL 114 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH---TS-T-T---EEEEEEECC
T ss_pred CCCEEEEeccCCCHHHHHHH---Hc-C-C---EEEEECchh
Confidence 35689999999999998762 33 3 3 579999883
No 276
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=63.84 E-value=2.9 Score=32.45 Aligned_cols=37 Identities=19% Similarity=-0.036 Sum_probs=26.9
Q ss_pred CCcEEEEeccccccccCCCCCCC-CCceEEEEEEEee--eeeceec
Q 013949 390 PNEEFEVESLTAVCYGDPNKTKK-PGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 390 ~P~~fvvENV~gi~~~~p~~~~~-~gl~~~v~w~~~~--~~~~~p~ 432 (433)
....|.||.+.+--. .+ ..+.|.|.|+++. ..||+|.
T Consensus 18 ~~e~yeVE~Il~~r~------~~~g~~~YlVkWkGy~~~~~TWEp~ 57 (75)
T 2rsn_A 18 DADVYEVEDILADRV------NKNGINEYYIKWAGYDWYDNTWEPE 57 (75)
T ss_dssp GGGCEEEEEEEEEEE------CSSSCEEEEEEEESSCGGGCEEEEG
T ss_pred CCceEEEEEEEEEEE------cCCCcEEEEEEECCCCCcCCeeecH
Confidence 346789999887532 12 2378999999984 4799995
No 277
>3i91_A Chromobox protein homolog 8; chromobox homolog 8, CBX8, structural genomics structural genomics consortium, SGC, chromatin regulator, N phosphoprotein, repressor; HET: M3L; 1.55A {Homo sapiens} SCOP: b.34.13.2 PDB: 3gv6_A* 3i90_A*
Probab=63.64 E-value=1.6 Score=31.44 Aligned_cols=34 Identities=21% Similarity=0.121 Sum_probs=25.9
Q ss_pred EEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 393 EFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 393 ~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
.|.||.+.+--. ....+.|.|.|+++. ..||+|.
T Consensus 3 ~y~VE~Il~~r~------~~g~~~YlVkWkGy~~~~~TWEp~ 38 (54)
T 3i91_A 3 VFAAEALLKRRI------RKGRMEYLVKWKGWSQKYSTWEPE 38 (54)
T ss_dssp EEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEG
T ss_pred eEEEEEEEEEEE------eCCcEEEEEEEeCCCcccCcccch
Confidence 678888877643 235689999999984 4899995
No 278
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=63.50 E-value=11 Score=37.61 Aligned_cols=58 Identities=19% Similarity=0.229 Sum_probs=44.5
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc--CCCCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN--HPETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N--~p~~~v~~~di~d~~ 342 (433)
.-.|||+..|.|+++..|.. ...+-+ +.|+|+|+.-+..++.. .++..++++|+-++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~--~~~~~~---vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYN--KYCPRQ---YSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWS 118 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHH--HHCCSE---EEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHH
T ss_pred CCEEEEECCCCCHHHHHHHh--hCCCCE---EEEEecCHHHHHHHHHhccCCCEEEEECCccchh
Confidence 46899999999999999832 122345 46999999999888874 356789999996553
No 279
>1q3l_A Heterochromatin protein 1; chromodomain, HP1, chromatin, methyllysine, monomethyllysine, structural protein; HET: MLZ; 1.64A {Drosophila melanogaster} SCOP: b.34.13.2 PDB: 1kne_A* 1kna_A*
Probab=62.48 E-value=1.4 Score=33.73 Aligned_cols=39 Identities=21% Similarity=0.048 Sum_probs=27.4
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCceEEEEEEEe--eeeeceecC
Q 013949 389 VPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLII--CYLTFVPFD 433 (433)
Q Consensus 389 ~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~--~~~~~~p~~ 433 (433)
-.+..+.||.|.+--.. +..+.|.|.|+++ ...||+|.+
T Consensus 12 ~~~~ey~VEkIld~R~~------~g~~eYlVKWkGy~~~~~TWEp~e 52 (69)
T 1q3l_A 12 EEEEEYAVEKIIDRRVR------KGMVEYYLKWKGYPETENTWEPEN 52 (69)
T ss_dssp ----CEEEEEEEEEEEE------TTEEEEEEEETTSCGGGCEEEEGG
T ss_pred cCCCcEEEEEEEEEEEE------CCeEEEEEEEcCCCcccCCccchH
Confidence 34567899999887532 3468999999998 458999953
No 280
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=62.28 E-value=5.1 Score=37.21 Aligned_cols=43 Identities=14% Similarity=-0.009 Sum_probs=32.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN 327 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N 327 (433)
...++|||=||.|.++.-+ ...|+.- +.++|+++.+++..+.+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~----~~~~~~~--v~g~D~s~~~l~~a~~~ 97 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLA----ACDSFQD--ITLSDFTDRNREELEKW 97 (263)
T ss_dssp CEEEEEESSCTTCCGGGTT----GGGTEEE--EEEEESCHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHH----HHhhhcc--eeeccccHHHHHHHHHH
Confidence 4568999999998776543 4557652 57999999999987764
No 281
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=62.17 E-value=9.8 Score=31.45 Aligned_cols=52 Identities=19% Similarity=0.157 Sum_probs=39.3
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
+..|+|.+...+...+...|+++ .++|.++..++.++.. ...++..|+.+-.
T Consensus 10 ~I~G~G~iG~~la~~L~~~g~~V---~~id~~~~~~~~~~~~--~~~~~~gd~~~~~ 61 (141)
T 3llv_A 10 IVIGSEAAGVGLVRELTAAGKKV---LAVDKSKEKIELLEDE--GFDAVIADPTDES 61 (141)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCE---EEEESCHHHHHHHHHT--TCEEEECCTTCHH
T ss_pred EEECCCHHHHHHHHHHHHCCCeE---EEEECCHHHHHHHHHC--CCcEEECCCCCHH
Confidence 45688888877766667789985 6899999988888764 3567788886543
No 282
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=61.97 E-value=7.7 Score=37.01 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=34.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
..-+||||=||.|=+++.+ . .+.. ++|+|||+.+++..+.|.
T Consensus 105 ~p~~VLDlGCG~gpLal~~----~-~~~~---y~a~DId~~~i~~ar~~~ 146 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYE----R-GIAS---VWGCDIHQGLGDVITPFA 146 (253)
T ss_dssp CCSEEEEETCTTTHHHHHH----T-TCSE---EEEEESBHHHHHHHHHHH
T ss_pred CCCeEEEecCCccHHHHHh----c-cCCe---EEEEeCCHHHHHHHHHHH
Confidence 3559999999999999876 3 3444 689999999999998884
No 283
>2epb_A Chromodomain-helicase-DNA-binding protein 6; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.62 E-value=1.3 Score=33.65 Aligned_cols=47 Identities=15% Similarity=0.034 Sum_probs=32.3
Q ss_pred CCCCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEeee--eeceec
Q 013949 386 DSNVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIICY--LTFVPF 432 (433)
Q Consensus 386 i~~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~~--~~~~p~ 432 (433)
.+.++|.+++||-|.+--.......+.....|-|.|+++.| -||+|-
T Consensus 4 ~~~~~pe~~~VErIl~~r~~~~~~~g~~~~eYLVKWkgl~y~e~TWE~~ 52 (68)
T 2epb_A 4 GSSGNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELE 52 (68)
T ss_dssp SCSSCSSCCCCCEEEEEEEEECSSSCCEEEEEEEECTTSCGGGCCEEET
T ss_pred CCcCCCCceEEeEEEEEEecccccCCCcceEEEEEEcCCChhcCccccc
Confidence 46789999999999875321111112235789999999865 688875
No 284
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=61.50 E-value=5.2 Score=38.79 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=34.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 331 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~ 331 (433)
...++||+=||.|+++.-| ...|..- ++|+|+++...+.-..+.|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L----~~~ga~~--V~aVDvs~~mL~~a~r~~~rv 131 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVM----LQNGAKL--VYAVDVGTNQLVWKLRQDDRV 131 (291)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCSE--EEEECSSSSCSCHHHHTCTTE
T ss_pred cccEEEecCCCccHHHHHH----HhCCCCE--EEEEECCHHHHHHHHHhCccc
Confidence 3568999999999999876 4456542 689999998877644455543
No 285
>3h91_A Chromobox protein homolog 2; human chromobox homolog 2, CBX2, structural genomics, structural genomics consortium, SGC, chromatin regulator, D binding, nucleus; HET: M3L; 1.50A {Homo sapiens} SCOP: b.34.13.2 PDB: 2k28_A 3i8z_A
Probab=59.88 E-value=2.1 Score=30.89 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=26.3
Q ss_pred cEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 392 EEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 392 ~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
..|.||.+.+--. ....+.|.|.|+++. ..||+|.
T Consensus 2 ~~y~VE~Il~~r~------~~g~~~YlVkWkGy~~~~~TWEp~ 38 (54)
T 3h91_A 2 QVFAAECILSKRL------RKGKLEYLVKWRGWSSKHNSWEPE 38 (54)
T ss_dssp CEEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEG
T ss_pred CceEEEEEEEEEE------eCCcEEEEEEEeCCCCcCCCeecH
Confidence 3678888877643 235689999999984 5799995
No 286
>1pfb_A Polycomb protein; chromatin, histone methylation, polycomb, chromodomain, peptide binding protein; HET: M3L; 1.40A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=59.73 E-value=2 Score=31.13 Aligned_cols=35 Identities=20% Similarity=0.077 Sum_probs=25.9
Q ss_pred EEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceecC
Q 013949 393 EFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPFD 433 (433)
Q Consensus 393 ~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~~ 433 (433)
.|.||.+.+--. .+..+.|.|.|+++. ..||+|.+
T Consensus 3 ~y~VE~Il~~r~------~~g~~~YlVKWkgy~~~~~TWEp~~ 39 (55)
T 1pfb_A 3 VYAAEKIIQKRV------KKGVVEYRVKWKGWNQRYNTWEPEV 39 (55)
T ss_dssp EEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEGG
T ss_pred EEEEEEEEEEEE------eCCeEEEEEEEcCCCCccCcEeEHH
Confidence 577888877643 134689999999984 48999953
No 287
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=57.89 E-value=5.2 Score=42.08 Aligned_cols=46 Identities=15% Similarity=0.124 Sum_probs=32.2
Q ss_pred cEEecccchhHHHHhHhhhhhc----CC-------CeEeeEEEeecCHhhHHHHHHcC
Q 013949 282 SLLDLYSGCGAMSTGLCIGASL----SG-------VKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 282 ~~lDLFsG~GG~s~Gl~~ga~~----aG-------~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
+++|.+||+|||-+.+..-+.. .+ ..+ ..+++|+++.+...-+.|.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~-~i~G~Eid~~~~~lA~~Nl 303 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQI-SVYGQESNPTTWKLAAMNM 303 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGE-EEEECCCCHHHHHHHHHHH
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhc-eEEEEeCCHHHHHHHHHHH
Confidence 8999999999998765211110 01 022 3689999999999888773
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=56.85 E-value=12 Score=40.78 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=44.4
Q ss_pred CCcEEecccchhHHHHh-HhhhhhcCC---------CeEeeEEEeecCHhhHHHHHHc----CCC-CceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTG-LCIGASLSG---------VKLVTRWAIDINPHACKSLKFN----HPE-TKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~G-l~~ga~~aG---------~~~~t~~avD~d~~A~~t~~~N----~p~-~~v~~~di~d~~ 342 (433)
...|||+=||-|-++.- |+ +++.|| ..+ .++|||.|+.|..+++.. +.+ ++++++|++++.
T Consensus 410 ~~VVldVGaGtGpLs~~al~-A~~~a~~~~~~~~~~~~~-kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILK-SEREYNNTFRQGQESLKV-KLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHH-HHHHHHHHHSTTSCCCEE-EEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHH-HHHHhCcccccccccccc-EEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcc
Confidence 45799999999999863 32 223345 343 479999999988777643 333 689999999885
No 289
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=54.57 E-value=5.2 Score=36.86 Aligned_cols=53 Identities=21% Similarity=0.189 Sum_probs=36.4
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCC--CeEeeEEEeecCHh------hHHHHHHcC------CCCceeecC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSG--VKLVTRWAIDINPH------ACKSLKFNH------PETKVRNEA 337 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~------A~~t~~~N~------p~~~v~~~d 337 (433)
...++||+-||.|.++.-|. ...| .+ +.++|+++. +++..+.+. +...++..|
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~---~~~g~~~~---v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLA---DQVGSSGH---VTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHH---HHHCTTCE---EEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred CCCEEEEeCCCCCHHHHHHH---HHhCCCCE---EEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 45699999999999998772 2224 44 579999986 666555553 234566666
No 290
>2rso_A Chromatin-associated protein SWI6; chromodomain, silencing, chromosomal protein, Met transcription; NMR {Schizosaccharomyces pombe}
Probab=54.47 E-value=4.1 Score=32.82 Aligned_cols=42 Identities=14% Similarity=-0.026 Sum_probs=29.9
Q ss_pred CCCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEee---eeeceec
Q 013949 387 SNVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC---YLTFVPF 432 (433)
Q Consensus 387 ~~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~---~~~~~p~ 432 (433)
....+..|+||.|.+--+.. ....+.|.|.|+++. ..||+|.
T Consensus 24 ~~~~~eey~VE~Il~~r~~~----~~g~~~YlVkWkGy~~~~~~TWEP~ 68 (92)
T 2rso_A 24 EEEEEDEYVVEKVLKHRMAR----KGGGYEYLLKWEGYDDPSDNTWSSE 68 (92)
T ss_dssp CCCCCCCCCEEEEEEEEECT----TSSCEEEEEEETTCCCCTTSEEECG
T ss_pred ccCcCceEEEEEEEEEEeec----CCCEEEEEEEEccCCCcccCccccH
Confidence 35566789999998864311 123589999999983 3689995
No 291
>3fdt_A Chromobox protein homolog 5; chromobox homolog5, CBX5, structural GENO structural genomics consortium, SGC, centromere, nucleus, phosphoprotein; HET: M3L; 2.00A {Homo sapiens}
Probab=54.22 E-value=4.2 Score=29.84 Aligned_cols=35 Identities=23% Similarity=0.040 Sum_probs=26.3
Q ss_pred cEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 392 EEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 392 ~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
..|+||.+.+--.. ...+.|.|.|+++. ..||+|.
T Consensus 2 eey~VE~Il~~r~~------~g~~~YlVkWkGy~~~~~TWEp~ 38 (59)
T 3fdt_A 2 EEYVVEKVLDRRVV------KGQVEYLLKWKGFSEEHNTWEPE 38 (59)
T ss_dssp CEEEEEEEEEEEEE------TTEEEEEEEETTSCGGGCEEEEG
T ss_pred CeEEEEEEEEEEEe------CCeEEEEEEEeCCCcccCCccch
Confidence 35788888776432 35689999999984 5799985
No 292
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=53.77 E-value=18 Score=29.14 Aligned_cols=51 Identities=24% Similarity=0.309 Sum_probs=36.1
Q ss_pred ccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 287 FsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
..|+|.+...+...+...|+++ ..+|.++..++.+...+ +..++..|..+.
T Consensus 9 IiG~G~iG~~~a~~L~~~g~~v---~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~ 59 (140)
T 1lss_A 9 IAGIGRVGYTLAKSLSEKGHDI---VLIDIDKDICKKASAEI-DALVINGDCTKI 59 (140)
T ss_dssp EECCSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHC-SSEEEESCTTSH
T ss_pred EECCCHHHHHHHHHHHhCCCeE---EEEECCHHHHHHHHHhc-CcEEEEcCCCCH
Confidence 4589988887766566789874 58899998888777654 344566666543
No 293
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=52.78 E-value=8.8 Score=30.37 Aligned_cols=38 Identities=34% Similarity=0.579 Sum_probs=32.6
Q ss_pred eeCCEEEEEeC-CCCccEEEEEEEEeecCCCceEEEEEEe
Q 013949 136 NLGDDAYVKAE-EGAVDYIARIVELFESVDGEPYFKARWF 174 (433)
Q Consensus 136 ~vGD~VyV~~~-~~~p~yIgrI~ei~e~~dg~~~v~VrWF 174 (433)
.+||.+.|... .+.+...|.|+++-. .+|.+=+.|+|+
T Consensus 7 ~vGDrlvv~g~~vg~~~R~GeIvEV~g-~dG~PPY~VRw~ 45 (83)
T 2a7y_A 7 KVGDYLVVKGTTTERHDQHAEIIEVRS-ADGSPPYVVRWL 45 (83)
T ss_dssp CTTEEEEESCTTTSCCEEEEEEEECSC-SSSCSCEEEEET
T ss_pred cCCCEEEEecCcCCCCCcEEEEEEEEC-CCCCCCEEEEec
Confidence 57999999988 688999999999864 578888899996
No 294
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=51.48 E-value=19 Score=26.59 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=24.0
Q ss_pred EEeeCCEEEEEeCCCCccEEEEEEEEeec
Q 013949 134 LYNLGDDAYVKAEEGAVDYIARIVELFES 162 (433)
Q Consensus 134 ~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~ 162 (433)
.+.+|+.|+++-.++ .+|.|.|+++...
T Consensus 3 ~f~~GedVLarwsDG-~fYlGtI~~V~~~ 30 (58)
T 4hcz_A 3 RLWEGQDVLARWTDG-LLYLGTIKKVDSA 30 (58)
T ss_dssp SCCTTCEEEEECTTS-CEEEEEEEEEETT
T ss_pred ccccCCEEEEEecCC-CEEeEEEEEEecC
Confidence 467899999999887 5899999998754
No 295
>2k1b_A Chromobox protein homolog 7; alpha/beta protein, chromatin regulator, nucleus, repressor, transcription, transcription regulation; NMR {Homo sapiens} PDB: 2l12_A* 2l1b_A*
Probab=51.38 E-value=1.2 Score=34.44 Aligned_cols=37 Identities=24% Similarity=0.186 Sum_probs=26.2
Q ss_pred CcEEEEeccccccccCCCCCCCCCceEEEEEEEe--eeeeceecC
Q 013949 391 NEEFEVESLTAVCYGDPNKTKKPGVYFKECCLII--CYLTFVPFD 433 (433)
Q Consensus 391 P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~--~~~~~~p~~ 433 (433)
...|.||.+.+--. .+..+.|.|.|+++ ...||+|.+
T Consensus 19 ~~eyeVEkIld~r~------~~g~~~YlVKWkGy~~~~~TWEp~e 57 (73)
T 2k1b_A 19 EQVFAVESIRKKRV------RKGKVEYLVKWKGWPPKYSTWEPEE 57 (73)
T ss_dssp CCCCCCSEEEEEEE------ETTEEEEEEECTTCCGGGCCEEETT
T ss_pred CceEEEEEEEEEEE------cCCcEEEEEEECCCCcccCeecchH
Confidence 34567777766542 23468999999998 457999963
No 296
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=51.01 E-value=25 Score=35.04 Aligned_cols=61 Identities=21% Similarity=0.133 Sum_probs=42.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC--CCceeecChhhHHHh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP--ETKVRNEAADDFLSL 344 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p--~~~v~~~di~d~~~l 344 (433)
+.-.+||.-+|.||-+..|. +..|-.. .++|+|.|+.|.+.-+ +.. ...+++.+-.++...
T Consensus 57 pggiyVD~TlG~GGHS~~iL---~~lg~~G-rVig~D~Dp~Al~~A~-rL~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLIL---SQLGEEG-RLLAIDRDPQAIAVAK-TIDDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHH---TTCCTTC-EEEEEESCHHHHHHHT-TCCCTTEEEEESCGGGHHHH
T ss_pred CCCEEEEeCcCCCHHHHHHH---HhCCCCC-EEEEEECCHHHHHHHH-hhcCCcEEEEeCCHHHHHHH
Confidence 44589999999999999883 3333222 2689999999998764 332 235777777766543
No 297
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=50.26 E-value=17 Score=35.22 Aligned_cols=56 Identities=11% Similarity=0.167 Sum_probs=39.8
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d 340 (433)
...++||+-||.|.++..|.. ...+.+ ..++|+ +.+++..+.|.. .+.++..|+.+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~--~~~~~~---~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIAL--RAPHLR---GTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK 243 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHH--HCTTCE---EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcCHHHHHHHH--HCCCCE---EEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 346999999999999988732 223555 469999 988887776631 35667777653
No 298
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=49.09 E-value=11 Score=40.45 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=43.8
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHH---cC-C-CCceeecChhhHH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF---NH-P-ETKVRNEAADDFL 342 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~---N~-p-~~~v~~~di~d~~ 342 (433)
...|+|+=||-|-++.---.+++.+|.++. +||||.++.|..+.+. |. . .++++++|++++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vk-VyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~ 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIK-LYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEE-EEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcE-EEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc
Confidence 357999999999886532234455677653 8999999988777643 32 2 2479999998753
No 299
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=48.84 E-value=15 Score=35.30 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=29.3
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF 326 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~ 326 (433)
-+.+|.|+|+|++...+ .. . ..+.+|+|+.-+..|+.
T Consensus 37 ~~yvEpF~GggaV~~~~----~~---~--~~i~ND~n~~Lin~y~~ 73 (284)
T 2dpm_A 37 NRYFEPFVGGGALFFDL----AP---K--DAVINDFNAELINCYQQ 73 (284)
T ss_dssp SCEEETTCTTCHHHHHH----CC---S--EEEEEESCHHHHHHHHH
T ss_pred CEEEeecCCccHHHHhh----hc---c--ceeeeecchHHHHHHHH
Confidence 37999999999988765 22 2 26899999999998844
No 300
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=48.69 E-value=24 Score=27.44 Aligned_cols=48 Identities=17% Similarity=0.103 Sum_probs=33.9
Q ss_pred cchhHHHHhHhhhhhcCC-CeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 288 SGCGAMSTGLCIGASLSG-VKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 288 sG~GG~s~Gl~~ga~~aG-~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
-|+|++...+...+...| ++ +.++|.++...+.+. .++..++..|+.+
T Consensus 11 ~G~G~iG~~~~~~l~~~g~~~---v~~~~r~~~~~~~~~--~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 11 VGAGKIGQMIAALLKTSSNYS---VTVADHDLAALAVLN--RMGVATKQVDAKD 59 (118)
T ss_dssp ECCSHHHHHHHHHHHHCSSEE---EEEEESCHHHHHHHH--TTTCEEEECCTTC
T ss_pred ECCCHHHHHHHHHHHhCCCce---EEEEeCCHHHHHHHH--hCCCcEEEecCCC
Confidence 377998888876667788 66 468999988777766 3345566666654
No 301
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=48.19 E-value=11 Score=36.34 Aligned_cols=56 Identities=11% Similarity=0.121 Sum_probs=38.6
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----C-CCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----P-ETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p-~~~v~~~di~d 340 (433)
...++||+-||.|.++..|.. ...++. ..++|+ +.+++..+.|. + ...++..|+.+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~--~~~~~~---~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIAR--RAPHVS---ATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE 244 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHH--HCTTCE---EEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred cCcEEEEeCCcCcHHHHHHHH--hCCCCE---EEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 346999999999999988732 223444 468998 88887776653 1 35677777643
No 302
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=48.01 E-value=3.6 Score=31.65 Aligned_cols=38 Identities=24% Similarity=0.164 Sum_probs=27.5
Q ss_pred CCcEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceecC
Q 013949 390 PNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPFD 433 (433)
Q Consensus 390 ~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~~ 433 (433)
....+.||.+.+--. .+..+.|.|.|+++. ..||+|.+
T Consensus 10 ~~~~y~VE~Il~~r~------~~g~~~YlVKWkGy~~~~~TWEp~~ 49 (74)
T 2kvm_A 10 GEQVFAVESIRKKRV------RKGKVEYLVKWKGWPPKYSTWEPEE 49 (74)
T ss_dssp CCCCCCEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEETT
T ss_pred CCccEEEEEEEEEEE------eCCcEEEEEEEcCCCCccCeEeeHH
Confidence 345678888877643 234689999999984 47999964
No 303
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=47.68 E-value=12 Score=35.60 Aligned_cols=56 Identities=13% Similarity=0.150 Sum_probs=39.7
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC-----C-CCceeecChhh
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH-----P-ETKVRNEAADD 340 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~-----p-~~~v~~~di~d 340 (433)
...++||+-||.|.++..+.. ...+.+ +.++|++ .+++..+.+. + ...+...|+.+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~--~~p~~~---~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 226 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQ--HNPNAE---IFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFE 226 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHH--HCTTCE---EEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTT
T ss_pred CCCEEEEECCCcCHHHHHHHH--HCCCCe---EEEEecH-HHHHHHHHHHHhcCCCcceEEEeccccc
Confidence 456999999999999988732 223556 4799999 8887777663 2 25666777654
No 304
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=47.46 E-value=26 Score=33.88 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=40.3
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc-----CCC-CceeecChhhH
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN-----HPE-TKVRNEAADDF 341 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N-----~p~-~~v~~~di~d~ 341 (433)
..++||+-||.|.++..|.. ...+.+ +.++|+ +.+++..+.| .++ +.++..|+.+.
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~--~~p~~~---~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLK--HFPELD---STILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE 252 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHH--HCTTCE---EEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS
T ss_pred CCEEEEECCcccHHHHHHHH--HCCCCe---EEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC
Confidence 45999999999999988732 223556 469999 9888887765 333 56777777653
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=47.23 E-value=19 Score=31.05 Aligned_cols=51 Identities=24% Similarity=0.228 Sum_probs=37.2
Q ss_pred cccchhHHHHhHhhhhhcC-CCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 286 LYSGCGAMSTGLCIGASLS-GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~a-G~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
++.|+|.+...+...+... |+++ .++|.++..++.++.. +..++.+|..+.
T Consensus 43 ~IiG~G~~G~~~a~~L~~~~g~~V---~vid~~~~~~~~~~~~--g~~~~~gd~~~~ 94 (183)
T 3c85_A 43 LILGMGRIGTGAYDELRARYGKIS---LGIEIREEAAQQHRSE--GRNVISGDATDP 94 (183)
T ss_dssp EEECCSHHHHHHHHHHHHHHCSCE---EEEESCHHHHHHHHHT--TCCEEECCTTCH
T ss_pred EEECCCHHHHHHHHHHHhccCCeE---EEEECCHHHHHHHHHC--CCCEEEcCCCCH
Confidence 3569998888876555667 9885 6899999988887754 355677777543
No 306
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=46.98 E-value=17 Score=34.24 Aligned_cols=56 Identities=21% Similarity=0.138 Sum_probs=40.0
Q ss_pred CcEEecccch---hHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC---CCCceeecChhhH
Q 013949 281 MSLLDLYSGC---GAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH---PETKVRNEAADDF 341 (433)
Q Consensus 281 l~~lDLFsG~---GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~---p~~~v~~~di~d~ 341 (433)
-++|||=||. |.+..-+. ....|.+ +.++|+++.+++.-+.+. +.+.+++.|+.+.
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~--~~~p~~~---v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQ--SVNPDAR---VVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDP 140 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHH--HHCTTCE---EEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCH
T ss_pred CEEEEECCCCCCCChHHHHHH--HhCCCCE---EEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCc
Confidence 5899999998 86654331 1124666 479999999888877765 4567888998764
No 307
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=46.35 E-value=2.4 Score=31.49 Aligned_cols=34 Identities=24% Similarity=0.112 Sum_probs=24.8
Q ss_pred EEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 393 EFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 393 ~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
.|.||.+.+.-. ....+.|.|.|+++. ..||+|.
T Consensus 4 ~y~VE~Il~~r~------~~g~~~YlVkWkGy~~~~~TWEp~ 39 (62)
T 3lwe_A 4 VFEVEKILDMKT------EGGKVLYKVRWKGYTSDDDTWEPE 39 (62)
T ss_dssp SCCEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEH
T ss_pred eEEEEEEEEEEE------cCCeEEEEEEEeCCCCcCCCeeeH
Confidence 466777766542 235689999999984 5899984
No 308
>2dnv_A Chromobox protein homolog 8; chromo domain, histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.34.13.2
Probab=46.33 E-value=3.1 Score=31.06 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=26.6
Q ss_pred CcEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceecC
Q 013949 391 NEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPFD 433 (433)
Q Consensus 391 P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~~ 433 (433)
...|.||.|.+--. .+..+.|.|.|+++. ..||+|.+
T Consensus 8 ~~ey~VE~Il~~r~------~~g~~~YlVKWkGy~~~~~TWEp~~ 46 (64)
T 2dnv_A 8 ERVFAAEALLKRRI------RKGRMEYLVKWKGWSQKYSTWEPEE 46 (64)
T ss_dssp CCCCCCCCEEEEEE------SSSSEEEEECCSSCCCSSCCEEETT
T ss_pred CceEEEEEEEEEEE------eCCcEEEEEEECCCCcccCCccCHh
Confidence 34567777776542 234689999999984 58999963
No 309
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=46.12 E-value=11 Score=29.42 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.4
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEEeec
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVELFES 162 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~ 162 (433)
..|.+|+.|+++-.+| .+|.|.|+++...
T Consensus 25 ~~f~eGeDVLarwsDG-lfYLGTI~kV~~~ 53 (79)
T 2m0o_A 25 PRLWEGQDVLARWTDG-LLYLGTIKKVDSA 53 (79)
T ss_dssp CCCCTTCEEEBCCTTS-CCCEEEEEEEETT
T ss_pred ceeccCCEEEEEecCC-CEEeEEEEEeccC
Confidence 5799999999999888 5799999998764
No 310
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=45.79 E-value=25 Score=26.64 Aligned_cols=29 Identities=21% Similarity=0.463 Sum_probs=24.7
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEEeec
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVELFES 162 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~ 162 (433)
..|.+||+|+..=.++ .+|.|.|++|.+.
T Consensus 12 ~~f~vGddVLA~wtDG-l~Y~gtI~~V~~~ 40 (66)
T 2eqj_A 12 CKFEEGQDVLARWSDG-LFYLGTIKKINIL 40 (66)
T ss_dssp CCSCTTCEEEEECTTS-CEEEEEEEEEETT
T ss_pred ccccCCCEEEEEEccC-cEEEeEEEEEccC
Confidence 3589999999998777 5799999999864
No 311
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=45.49 E-value=18 Score=35.80 Aligned_cols=43 Identities=12% Similarity=0.218 Sum_probs=35.9
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
...++||+=||.|.+..-| ...|++ +.++|+++.+.+..+.+.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l----~~~g~~---v~gvD~s~~~~~~a~~~~ 149 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTI----QEAGVR---HLGFEPSSGVAAKAREKG 149 (416)
T ss_dssp SSCEEEEETCTTTTTHHHH----HHTTCE---EEEECCCHHHHHHHHTTT
T ss_pred CCCEEEEecCCCCHHHHHH----HHcCCc---EEEECCCHHHHHHHHHcC
Confidence 4569999999999998877 556876 479999999998888773
No 312
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=43.70 E-value=26 Score=31.29 Aligned_cols=52 Identities=8% Similarity=0.049 Sum_probs=38.6
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+.+|+|-+...+...+...|+++ ..+|.|+..++.+.... +..++.+|+.+.
T Consensus 4 iIiG~G~~G~~la~~L~~~g~~v---~vid~~~~~~~~l~~~~-~~~~i~gd~~~~ 55 (218)
T 3l4b_C 4 IIIGGETTAYYLARSMLSRKYGV---VIINKDRELCEEFAKKL-KATIIHGDGSHK 55 (218)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCE---EEEESCHHHHHHHHHHS-SSEEEESCTTSH
T ss_pred EEECCCHHHHHHHHHHHhCCCeE---EEEECCHHHHHHHHHHc-CCeEEEcCCCCH
Confidence 46788888777766666789885 59999999888876554 356778887653
No 313
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=43.64 E-value=13 Score=32.85 Aligned_cols=36 Identities=22% Similarity=0.175 Sum_probs=29.6
Q ss_pred CCcEEecccchh-HHHHhHhhhhh-cCCCeEeeEEEeecCHhhHH
Q 013949 280 EMSLLDLYSGCG-AMSTGLCIGAS-LSGVKLVTRWAIDINPHACK 322 (433)
Q Consensus 280 ~l~~lDLFsG~G-G~s~Gl~~ga~-~aG~~~~t~~avD~d~~A~~ 322 (433)
.-++||+=||.| -.+.-| . ..|+++ .|+|+++.|+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~L----a~~~g~~V---~atDInp~Av~ 73 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYI----RKHSKVDL---VLTDIKPSHGG 73 (153)
T ss_dssp SSEEEEETCTTCCHHHHHH----HHHSCCEE---EEECSSCSSTT
T ss_pred CCcEEEEccCCChHHHHHH----HHhCCCeE---EEEECCccccc
Confidence 459999999998 477766 4 489995 69999999988
No 314
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=42.88 E-value=15 Score=32.25 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=31.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++||+-||.|.++.-| +.+ +.++|+++. ...++..|+.++
T Consensus 67 ~~~~vLDiG~G~G~~~~~l-------~~~---v~~~D~s~~----------~~~~~~~d~~~~ 109 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI-------RNP---VHCFDLASL----------DPRVTVCDMAQV 109 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC-------CSC---EEEEESSCS----------STTEEESCTTSC
T ss_pred CCCeEEEECCcCCHHHHHh-------hcc---EEEEeCCCC----------CceEEEeccccC
Confidence 3468999999999987644 234 479999987 345777777663
No 315
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=42.87 E-value=2.7 Score=31.95 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=25.4
Q ss_pred cEEEEeccccccccCCCCCCCCCce-EEEEEEEee--eeeceecC
Q 013949 392 EEFEVESLTAVCYGDPNKTKKPGVY-FKECCLIIC--YLTFVPFD 433 (433)
Q Consensus 392 ~~fvvENV~gi~~~~p~~~~~~gl~-~~v~w~~~~--~~~~~p~~ 433 (433)
..|.||.|.+--..+ ...+. |.|.|+++. ..||+|.+
T Consensus 7 ~ey~VE~Il~~r~~~-----~g~~~~YlVKWkGy~~~~~TWEp~e 46 (70)
T 1g6z_A 7 EEYEVERIVDEKLDR-----NGAVKLYRIRWLNYSSRSDTWEPPE 46 (70)
T ss_dssp CSSCCCSCSEEECCT-----TSSCCEEEECCTTTTSSCCEEECGG
T ss_pred ceEEEEEEEEEEEcC-----CCcEEEEEEEECCCCCCCCceecHH
Confidence 345777777764322 13466 999999984 68999963
No 316
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=42.29 E-value=20 Score=33.35 Aligned_cols=44 Identities=16% Similarity=-0.099 Sum_probs=31.2
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcC
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
...++|||=||.|.++.-+ +...|.. +.++|+++.+++..+.+.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~---~~~~~~~---v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLS---ACSHFED---ITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCCGGGTT---GGGGCSE---EEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHh---hccCCCe---EEEeCCCHHHHHHHHHHH
Confidence 4568999999999844311 1223555 479999999998877754
No 317
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=42.08 E-value=19 Score=34.66 Aligned_cols=47 Identities=9% Similarity=-0.002 Sum_probs=32.8
Q ss_pred CCCcEEeccc------chhHHHHhHhhhhhcCC--CeEeeEEEeecCHhhHHHHHHcCCCCce-eecChhhH
Q 013949 279 PEMSLLDLYS------GCGAMSTGLCIGASLSG--VKLVTRWAIDINPHACKSLKFNHPETKV-RNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFs------G~GG~s~Gl~~ga~~aG--~~~~t~~avD~d~~A~~t~~~N~p~~~v-~~~di~d~ 341 (433)
...++|||-| |.|+ ... +...| .. +.++|+++. .+++.+ +++|+.++
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs-~~~----a~~~~~~~~---V~gvDis~~--------v~~v~~~i~gD~~~~ 118 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT-AVL----RQWLPTGTL---LVDSDLNDF--------VSDADSTLIGDCATV 118 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH-HHH----HHHSCTTCE---EEEEESSCC--------BCSSSEEEESCGGGC
T ss_pred CCCEEEEeCCCCCCCCCcHH-HHH----HHHcCCCCE---EEEEECCCC--------CCCCEEEEECccccC
Confidence 4568999999 5577 322 24443 44 579999998 246788 99999764
No 318
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=41.52 E-value=20 Score=34.05 Aligned_cols=47 Identities=15% Similarity=0.136 Sum_probs=32.2
Q ss_pred CCCcEEecccchhH----HHHhHhhhhh-cC-CCeEeeEEEeecCHhhHHHHHHcC
Q 013949 279 PEMSLLDLYSGCGA----MSTGLCIGAS-LS-GVKLVTRWAIDINPHACKSLKFNH 328 (433)
Q Consensus 279 ~~l~~lDLFsG~GG----~s~Gl~~ga~-~a-G~~~~t~~avD~d~~A~~t~~~N~ 328 (433)
..++++|+=||.|- +++-|...+. .. |++ +.|+|+++.|.+.-+.+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~---I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWK---VFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEE---EEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeE---EEEEECCHHHHHHHHhcC
Confidence 35899999999997 3332311000 01 455 579999999999998874
No 319
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=40.88 E-value=24 Score=33.53 Aligned_cols=54 Identities=11% Similarity=0.115 Sum_probs=39.5
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC------CCceeecChhh
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP------ETKVRNEAADD 340 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p------~~~v~~~di~d 340 (433)
.++||+-||.|.++..|.. ...+.+ +.++|+ +.+++..+.+.. ...++..|+.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~--~~p~~~---~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 228 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQ--AEPSAR---GVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ 228 (334)
T ss_dssp CEEEEETCTTCHHHHHHHH--HCTTCE---EEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT
T ss_pred CEEEEeCCCchHHHHHHHH--HCCCCE---EEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC
Confidence 6999999999999988732 223555 469999 988888877752 35667777644
No 320
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=40.55 E-value=13 Score=32.78 Aligned_cols=45 Identities=24% Similarity=0.301 Sum_probs=32.8
Q ss_pred ECCEEEeeCCEEEEEeCCCCccEEEEEEEEeecC---CCceEEEEEEee
Q 013949 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESV---DGEPYFKARWFY 175 (433)
Q Consensus 130 vdG~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~---dg~~~v~VrWFy 175 (433)
-||..|.+||.|..+- .+-|+|-|+|...-... .....+.|+||-
T Consensus 12 ~dg~~f~~GDLVWaKv-kG~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG 59 (154)
T 3llr_A 12 EDGRGFGIGELVWGKL-RGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFG 59 (154)
T ss_dssp CSSCCCCTTCEEEECC-TTSCCEEEEEECGGGTTSCCCCTTEEEEEETT
T ss_pred ccCCCCccCCEEEEec-CCCCCCCEEEecccccccccCCCCEEEEEEeC
Confidence 4677899999999997 55699999998864221 123467788873
No 321
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=40.47 E-value=14 Score=37.66 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=39.0
Q ss_pred CCCcEEecccc------hhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 279 PEMSLLDLYSG------CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 279 ~~l~~lDLFsG------~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
...++|||=|| .||.++-+.... ..+.. +.++|+++.+. .+.+++.++++|+.++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~-fP~a~---V~GVDiSp~m~----~~~~rI~fv~GDa~dl 276 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSF-FPRGQ---IYGLDIMDKSH----VDELRIRTIQGDQNDA 276 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHH-CTTCE---EEEEESSCCGG----GCBTTEEEEECCTTCH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHh-CCCCE---EEEEECCHHHh----hcCCCcEEEEeccccc
Confidence 35699999999 578887663211 12445 47999999873 3556778899999875
No 322
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=40.14 E-value=28 Score=33.16 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=29.0
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHc
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFN 327 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N 327 (433)
-+.+|.|+|+|++...+ .. . ..+.+|+|+.-+..|+.-
T Consensus 29 ~~yvEpF~Ggg~V~~~~------~~-~--~~i~ND~n~~lin~y~~i 66 (278)
T 2g1p_A 29 ECLVEPFVGAGSVFLNT------DF-S--RYILADINSDLISLYNIV 66 (278)
T ss_dssp SEEEETTCTTCHHHHTC------CC-S--EEEEEESCHHHHHHHHHH
T ss_pred CeEEeeccCccHHHHhh------cc-c--ceEEEeccHHHHHHHHHH
Confidence 38999999999887644 22 2 258999999988877644
No 323
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.53 E-value=7.6 Score=29.80 Aligned_cols=36 Identities=11% Similarity=-0.003 Sum_probs=26.7
Q ss_pred CcEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 391 NEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 391 P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
...|.||.|.+--.. +..+.|.|.|+++. ..||+|.
T Consensus 8 ~~ey~VE~Il~~r~~------~g~~~YlVKWkGy~~~~~TWEp~ 45 (74)
T 2d9u_A 8 EQVFAAECILSKRLR------KGKLEYLVKWRGWSSKHNSWEPE 45 (74)
T ss_dssp CCCCCEEEEEEEEEE------TTEEEEEEEETTSCTTTCEEEEG
T ss_pred CccEEEEEEEEEEEe------CCcEEEEEEECCCCCccCccccH
Confidence 445688888776432 34689999999984 6899985
No 324
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=37.45 E-value=29 Score=26.42 Aligned_cols=26 Identities=27% Similarity=0.659 Sum_probs=22.0
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEE
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVEL 159 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei 159 (433)
..|.+|++|+++-.++ -+|.|.|+..
T Consensus 14 ~~~~~geDVL~rw~DG-~fYLGtIVd~ 39 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDG-RFYLGTIIDQ 39 (69)
T ss_dssp CCCCTTCEEEEECTTS-CEEEEEEEEE
T ss_pred cccccCCeEEEEecCC-CEEEEEEEec
Confidence 5689999999998776 5899999664
No 325
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=36.15 E-value=29 Score=26.22 Aligned_cols=28 Identities=11% Similarity=0.062 Sum_probs=23.7
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEEe
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVELF 160 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei~ 160 (433)
..|.+||.|+-+=..+.-+|-+||.+|-
T Consensus 8 ~~~~vgd~VmaRW~Gd~~yYparI~Si~ 35 (66)
T 2l8d_A 8 RKYADGEVVMGRWPGSVLYYEVQVTSYD 35 (66)
T ss_dssp SSSCSSCEEEEECTTSSCEEEEEEEEEE
T ss_pred eEeecCCEEEEEcCCCccceEEEEEEec
Confidence 4689999999997544678999999997
No 326
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=35.22 E-value=22 Score=33.51 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=30.9
Q ss_pred CcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCC
Q 013949 281 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 330 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~ 330 (433)
-+.+|.|+|+|++...+ . . + .+.+|+|+.-...|+.-.-+
T Consensus 26 ~~yvEpF~GggaV~~~~----~-~--~---~viNDin~~li~~~~~i~~~ 65 (259)
T 1yf3_A 26 NRFVDLFCGGLSVSLNV----N-G--P---VLANDIQEPIIEMYKRLINV 65 (259)
T ss_dssp SEEEETTCTTCTTGGGS----C-S--S---EEEECSCHHHHHHHHHHTTC
T ss_pred CeEEEecCCccHHHHhc----c-c--c---EEEecCChHHHHHHHHHHHh
Confidence 38999999999987754 2 2 2 36999999999998866443
No 327
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=35.05 E-value=42 Score=31.33 Aligned_cols=50 Identities=18% Similarity=0.276 Sum_probs=40.6
Q ss_pred cchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 288 SGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 288 sG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
-|++|+..+++..+...|.++ ..+|+++...+......++...+..|+.+
T Consensus 9 Gas~GIG~aia~~la~~Ga~V---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 58 (247)
T 3ged_A 9 GGGHGIGKQICLDFLEAGDKV---CFIDIDEKRSADFAKERPNLFYFHGDVAD 58 (247)
T ss_dssp STTSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHTTCTTEEEEECCTTS
T ss_pred cCCCHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHhcCCEEEEEecCCC
Confidence 456788888888788899995 58899998888888888877778888864
No 328
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=35.03 E-value=16 Score=30.24 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=30.5
Q ss_pred CCEEEeeCCEEEEEeCCCCccEEEEEEEEeec--CCCceEEEEEEe
Q 013949 131 DGCLYNLGDDAYVKAEEGAVDYIARIVELFES--VDGEPYFKARWF 174 (433)
Q Consensus 131 dG~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~--~dg~~~v~VrWF 174 (433)
++..|.+||.|..+- .+-|+|-|+|..+-+. +.....+.|+||
T Consensus 16 ~~~~~~~GdlVwaK~-kGyP~WPa~V~~~p~~~~k~~~~~~~V~FF 60 (110)
T 1ri0_A 16 RQKEYKCGDLVFAKM-KGYPHWPARIDEMPEAAVKSTANKYQVFFF 60 (110)
T ss_dssp CSSSCCTTCEEEEEE-TTEEEEEEEEECCCSSSSCCCSSCEEEEET
T ss_pred ccCCCCCCCEEEEEe-CCCCCCCEEEecccHhhcCCCCCEEEEEEe
Confidence 557799999999987 5568999999865322 112345677777
No 329
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=34.13 E-value=19 Score=30.63 Aligned_cols=45 Identities=16% Similarity=0.137 Sum_probs=31.6
Q ss_pred ECCEEEeeCCEEEEEeCCCCccEEEEEEEEeecC-----CC-ceEEEEEEee
Q 013949 130 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESV-----DG-EPYFKARWFY 175 (433)
Q Consensus 130 vdG~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~-----dg-~~~v~VrWFy 175 (433)
-++..|.+||.|..+-. +-|+|-|+|...-... .+ ...+.|+||-
T Consensus 18 ~~~~~~~~GdlVwaK~~-g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg 68 (134)
T 2gfu_A 18 PTSSDFSPGDLVWAKME-GYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFD 68 (134)
T ss_dssp CSSCCCCTTSEEEECCT-TSCCEEEECCCCSSTTCCEEESSSCEEEEEEECS
T ss_pred CcCCCCCCCCEEEEeec-CCCCCCeeecchhhhhhhhhccCCCceEEEEECC
Confidence 35678999999999875 6699999998753211 11 2467777774
No 330
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=33.50 E-value=35 Score=25.87 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=23.9
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEEe
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVELF 160 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei~ 160 (433)
..|.+||.|+-+=..+.-+|-+||++|-
T Consensus 11 ~~f~vgd~VmaRW~Gd~~yYparItSit 38 (68)
T 2dig_A 11 RKFADGEVVRGRWPGSSLYYEVEILSHD 38 (68)
T ss_dssp CSSCSSCEEEEECTTTCCEEEEEEEEEE
T ss_pred eEeecCCEEEEEccCCccceEEEEEEec
Confidence 5689999999997655679999999997
No 331
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=33.33 E-value=19 Score=31.38 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=31.4
Q ss_pred CCEEEeeCCEEEEEeCCCCccEEEEEEEEeecC---CCceEEEEEEee
Q 013949 131 DGCLYNLGDDAYVKAEEGAVDYIARIVELFESV---DGEPYFKARWFY 175 (433)
Q Consensus 131 dG~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~---dg~~~v~VrWFy 175 (433)
+|..|.+||.|..+- .+-|+|-|+|...-... .....+.|+||-
T Consensus 8 ~~~~~~~GDlVWaKv-kGyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG 54 (147)
T 1khc_A 8 DDKEFGIGDLVWGKI-KGFSWWPAMVVSWKATSKRQAMPGMRWVQWFG 54 (147)
T ss_dssp SSSSCCTTCEEEEEE-TTTEEEEEEEECGGGTTSCCCCTTEEEEEETT
T ss_pred CCccCcCCCEEEEec-CCcCCCCEEeccchhhhcccCCCCeEEEEEec
Confidence 567899999999987 55699999998754321 112467777774
No 332
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=32.02 E-value=29 Score=34.86 Aligned_cols=55 Identities=18% Similarity=0.133 Sum_probs=39.3
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
..+++|||=|+.||.+.=| ...|.. |.|||+-+-+ .--..+|++.++.+|+..+.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l----~~rg~~---V~aVD~~~l~--~~l~~~~~V~~~~~d~~~~~ 265 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQL----VKRNMW---VYSVDNGPMA--QSLMDTGQVTWLREDGFKFR 265 (375)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCE---EEEECSSCCC--HHHHTTTCEEEECSCTTTCC
T ss_pred CCCEEEEeCcCCCHHHHHH----HHCCCE---EEEEEhhhcC--hhhccCCCeEEEeCcccccc
Confidence 5679999999999999866 444656 4799976533 22345677778888775543
No 333
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=31.46 E-value=34 Score=35.63 Aligned_cols=48 Identities=13% Similarity=0.048 Sum_probs=31.7
Q ss_pred CCcEEecccchhHHHHhHhhhhhcCCC--------eEeeEEEeecCHhhHHHHHHc
Q 013949 280 EMSLLDLYSGCGAMSTGLCIGASLSGV--------KLVTRWAIDINPHACKSLKFN 327 (433)
Q Consensus 280 ~l~~lDLFsG~GG~s~Gl~~ga~~aG~--------~~~t~~avD~d~~A~~t~~~N 327 (433)
.-+++|-+||.|||=+..-.-....+- .-.+.+++|+++.+...-+.|
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 348999999999997764221111110 002368999999988877766
No 334
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=31.28 E-value=5.1 Score=31.10 Aligned_cols=37 Identities=22% Similarity=0.035 Sum_probs=25.2
Q ss_pred cEEEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceecC
Q 013949 392 EEFEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPFD 433 (433)
Q Consensus 392 ~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~~ 433 (433)
..|.||.|.+--.. ....+.|.|.|+++. ..||+|.+
T Consensus 12 ~~y~VE~Il~~r~~-----~~g~~~YlVKWkGy~~~~~TWEp~~ 50 (78)
T 2dnt_A 12 ELYEVERIVDKRKN-----KKGKTEYLVRWKGYDSEDDTWEPEQ 50 (78)
T ss_dssp CSCCCCCEEEEEEC-----TTSCEEEEECBTTBCGGGCEEEETT
T ss_pred ceEEEEEEEEEEEc-----CCCcEEEEEEECCCCccCCceecHH
Confidence 45677777665321 123589999999985 58999963
No 335
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=31.20 E-value=49 Score=27.57 Aligned_cols=53 Identities=13% Similarity=0.086 Sum_probs=36.2
Q ss_pred ccchhHHHHhHhhhhhcCCCeEeeEEEeecC-HhhHHHHHHcCC-CCceeecChhhHH
Q 013949 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDIN-PHACKSLKFNHP-ETKVRNEAADDFL 342 (433)
Q Consensus 287 FsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d-~~A~~t~~~N~p-~~~v~~~di~d~~ 342 (433)
.+|+|.+...+...+...|+++ ..+|.+ +..++.+...++ +..++.+|+.+..
T Consensus 8 I~G~G~vG~~la~~L~~~g~~V---~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~ 62 (153)
T 1id1_A 8 VCGHSILAINTILQLNQRGQNV---TVISNLPEDDIKQLEQRLGDNADVIPGDSNDSS 62 (153)
T ss_dssp EECCSHHHHHHHHHHHHTTCCE---EEEECCCHHHHHHHHHHHCTTCEEEESCTTSHH
T ss_pred EECCCHHHHHHHHHHHHCCCCE---EEEECCChHHHHHHHHhhcCCCeEEEcCCCCHH
Confidence 4588888877765556689885 588987 455656655443 4678888886543
No 336
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=29.87 E-value=26 Score=33.74 Aligned_cols=30 Identities=23% Similarity=0.120 Sum_probs=22.5
Q ss_pred CCCcEEecccchhHHHHhHhhhhhcCCCeEeeEEEeec
Q 013949 279 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDI 316 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~ 316 (433)
+..++|||-||.||++.-| ...| . +.+||+
T Consensus 82 ~g~~VLDlGcG~G~~s~~l----a~~~-~---V~gvD~ 111 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYC----GGLK-N---VREVKG 111 (305)
T ss_dssp CCEEEEEETCTTSHHHHHH----HTST-T---EEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHH----HhcC-C---EEEEec
Confidence 3469999999999999866 2234 3 468888
No 337
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=29.28 E-value=61 Score=29.32 Aligned_cols=52 Identities=17% Similarity=0.265 Sum_probs=40.5
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
+-.|.||+..+++..+...|.++ ..++.++...+......++..++..|+.+
T Consensus 7 VTGas~gIG~~ia~~l~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~ 58 (247)
T 3dii_A 7 VTGGGHGIGKQICLDFLEAGDKV---CFIDIDEKRSADFAKERPNLFYFHGDVAD 58 (247)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHTTCTTEEEEECCTTS
T ss_pred EECCCCHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHhcccCCeEEeeCCC
Confidence 44567888888887777889985 57899998888888777776677788764
No 338
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.16 E-value=68 Score=28.11 Aligned_cols=58 Identities=7% Similarity=0.085 Sum_probs=41.0
Q ss_pred CcEEecccchhHHHHhHhhhhh-cCCCeEeeEEEeecCHh-hHHHHHHcCCCCceeecChhhH
Q 013949 281 MSLLDLYSGCGAMSTGLCIGAS-LSGVKLVTRWAIDINPH-ACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 281 l~~lDLFsG~GG~s~Gl~~ga~-~aG~~~~t~~avD~d~~-A~~t~~~N~p~~~v~~~di~d~ 341 (433)
++.+=+.-|+||+...+...+. ..|+++ .+++.++. ..+.+....++..++..|+.+.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~ 64 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHI---TLYGRQLKTRIPPEIIDHERVTVIEGSFQNP 64 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEE---EEEESSHHHHSCHHHHTSTTEEEEECCTTCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceE---EEEecCccccchhhccCCCceEEEECCCCCH
Confidence 4545566778999988877666 689985 57888877 6655544556667777888643
No 339
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=29.13 E-value=32 Score=27.65 Aligned_cols=51 Identities=18% Similarity=0.160 Sum_probs=33.9
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+..|+|++...+...+...|+++ ..+|.++..++.++.. ...++..|+.+.
T Consensus 10 ~I~G~G~iG~~~a~~l~~~g~~v---~~~d~~~~~~~~~~~~--~~~~~~~d~~~~ 60 (144)
T 2hmt_A 10 AVIGLGRFGGSIVKELHRMGHEV---LAVDINEEKVNAYASY--ATHAVIANATEE 60 (144)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCC---EEEESCHHHHHTTTTT--CSEEEECCTTCH
T ss_pred EEECCCHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHh--CCEEEEeCCCCH
Confidence 35678988888766667789874 5889888766654433 234566666543
No 340
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=27.86 E-value=34 Score=27.97 Aligned_cols=43 Identities=28% Similarity=0.240 Sum_probs=30.0
Q ss_pred CEEEeeCCEEEEEeCCCCccEEEEEEEEee---c----CCCceEEEEEEee
Q 013949 132 GCLYNLGDDAYVKAEEGAVDYIARIVELFE---S----VDGEPYFKARWFY 175 (433)
Q Consensus 132 G~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e---~----~dg~~~v~VrWFy 175 (433)
|..|++||.|..+-. +-|+|-|+|..--. . ..+...+.|++|-
T Consensus 3 ~~~~~~GdlVwaK~~-gyP~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg 52 (108)
T 2l89_A 3 DDRLNFGDRILVKAP-GYPWWPALLLRRKETKDSLNTNSSFNVLYKVLFFP 52 (108)
T ss_dssp SCCCCTTEEEEEECS-SSCEEEEEEEEEEEEESSSCSSSCEEEEEEEEETT
T ss_pred CCcccCCCEEEEEeC-CcCCCceEecCcccCcHHHhhccCCCCeEEEEECC
Confidence 456899999999875 66999999976321 1 1224567777774
No 341
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=27.73 E-value=59 Score=32.68 Aligned_cols=51 Identities=24% Similarity=0.214 Sum_probs=38.9
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+.+|+|-+..-+...+...|+.+ .++|.|+..++.++.. +..++.+|+.+.
T Consensus 8 iIiG~Gr~G~~va~~L~~~g~~v---vvId~d~~~v~~~~~~--g~~vi~GDat~~ 58 (413)
T 3l9w_A 8 IIAGFGRFGQITGRLLLSSGVKM---VVLDHDPDHIETLRKF--GMKVFYGDATRM 58 (413)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCE---EEEECCHHHHHHHHHT--TCCCEESCTTCH
T ss_pred EEECCCHHHHHHHHHHHHCCCCE---EEEECCHHHHHHHHhC--CCeEEEcCCCCH
Confidence 46788887777765566789885 6999999999988753 456788888654
No 342
>3f2u_A Chromobox protein homolog 1; human chromobox homolog 1, CBX1, structural genomics, struct genomics consortium, SGC, centromere, nucleus; 1.80A {Homo sapiens} PDB: 3tzd_A* 2l11_A* 3dm1_A*
Probab=27.59 E-value=14 Score=26.51 Aligned_cols=33 Identities=18% Similarity=-0.021 Sum_probs=22.9
Q ss_pred EEEeccccccccCCCCCCCCCceEEEEEEEee--eeeceec
Q 013949 394 FEVESLTAVCYGDPNKTKKPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 394 fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
|+||.+.+--. ....+.|.|.|+++. ..+|+|.
T Consensus 3 y~VE~Il~~r~------~~g~~~YlVkWkGy~~~~~TWEp~ 37 (55)
T 3f2u_A 3 YVVEKVLDRRV------VKGKVEYLLKWKGFSDEDNTWEPE 37 (55)
T ss_dssp CCEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEG
T ss_pred EEEEEEEEEEE------eCCeEEEEEEEEeCCCccCCeeEH
Confidence 45566555432 135689999999984 5799995
No 343
>2ee1_A Chromodomain helicase-DNA-binding protein 4; EC 3.6.1.-, ATP- dependent helicase CHD4, CHD-4, MI-2 autoantigen 218 kDa protein, MI2-beta; NMR {Homo sapiens}
Probab=27.46 E-value=11 Score=28.38 Aligned_cols=41 Identities=15% Similarity=0.002 Sum_probs=30.4
Q ss_pred CCCCCcEEEEeccccccccCCCCCCCCCceEEEEEEEeee--eeceec
Q 013949 387 SNVPNEEFEVESLTAVCYGDPNKTKKPGVYFKECCLIICY--LTFVPF 432 (433)
Q Consensus 387 ~~~~P~~fvvENV~gi~~~~p~~~~~~gl~~~v~w~~~~~--~~~~p~ 432 (433)
..++|.+++||-|.+--.. .....-|-|.|+++.| .||+|-
T Consensus 5 ~~~~pe~~~VeRIi~~r~~-----~~g~~eYLVKWkgl~y~e~TWE~~ 47 (64)
T 2ee1_A 5 SSGKPEWMMIHRILNHSVD-----KKGHVHYLIKWRDLPYDQASWESE 47 (64)
T ss_dssp SSSCCSSCCCCCCCEEEEC-----TTCCEEEEECCTTSCTTTCEEEET
T ss_pred cccCCCcEEEEEEEEEEec-----CCCCEEEEEEEcCCCcccCcccCC
Confidence 4789999999999765421 1235689999999966 678774
No 344
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=27.02 E-value=69 Score=26.35 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=29.6
Q ss_pred ccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCC
Q 013949 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 329 (433)
Q Consensus 287 FsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p 329 (433)
+-|+|+|...+...+...|+++ ..+|.++...+.+...+.
T Consensus 26 iiG~G~iG~~~a~~l~~~g~~v---~v~~r~~~~~~~~a~~~~ 65 (144)
T 3oj0_A 26 LVGNGMLASEIAPYFSYPQYKV---TVAGRNIDHVRAFAEKYE 65 (144)
T ss_dssp EECCSHHHHHHGGGCCTTTCEE---EEEESCHHHHHHHHHHHT
T ss_pred EECCCHHHHHHHHHHHhCCCEE---EEEcCCHHHHHHHHHHhC
Confidence 5688999888866666678873 577888887777766654
No 345
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=26.30 E-value=92 Score=23.48 Aligned_cols=37 Identities=5% Similarity=0.202 Sum_probs=28.6
Q ss_pred EEeeCCEEEEEeCCCCccEEEEEEEEeecCCCceEEEEEEee
Q 013949 134 LYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175 (433)
Q Consensus 134 ~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~dg~~~v~VrWFy 175 (433)
.|++||-|+.+=+++ -+|-|+|.++-.+ ..+.|..+-
T Consensus 6 ~~~vGd~vmArW~D~-~yYpA~I~si~~~----~~Y~V~F~d 42 (67)
T 3p8d_A 6 EFQINEQVLACWSDC-RFYPAKVTAVNKD----GTYTVKFYD 42 (67)
T ss_dssp CCCTTCEEEEECTTS-CEEEEEEEEECTT----SEEEEEETT
T ss_pred ccccCCEEEEEcCCC-CEeeEEEEEECCC----CeEEEEEeC
Confidence 588999999998444 6899999998643 457777765
No 346
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.28 E-value=75 Score=24.06 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=24.7
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEEeec
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVELFES 162 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~ 162 (433)
..|.+|+.|+..=.++ .+|.|.|.++...
T Consensus 8 ~~f~eGqdVLarWsDG-lfYlGtV~kV~~~ 36 (68)
T 2e5p_A 8 PRLWEGQDVLARWTDG-LLYLGTIKKVDSA 36 (68)
T ss_dssp CCCCTTCEEEEECTTS-SEEEEEEEEEETT
T ss_pred cccccCCEEEEEecCC-cEEEeEEEEEecC
Confidence 5688999999988787 5899999998753
No 347
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=26.00 E-value=29 Score=30.09 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=27.7
Q ss_pred EEeeCCEEEEEeCCCCccEEEEEEEEeecC--CCceEEEEEEee
Q 013949 134 LYNLGDDAYVKAEEGAVDYIARIVELFESV--DGEPYFKARWFY 175 (433)
Q Consensus 134 ~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~--dg~~~v~VrWFy 175 (433)
.|++||.|..+- .+-|+|-|+|...-... .....+.|+||-
T Consensus 22 ~f~~GdlVwaK~-~g~p~WPa~V~~~~~~~~~~~~~~~~V~FfG 64 (153)
T 4fu6_A 22 DFKPGDLIFAKM-KGYPHWPARVDEVPDGAVKPPTNKLPIFFFG 64 (153)
T ss_dssp GCCTTCEEEECC-TTSCCEEEEECCCC---CCCCTTCEEEEETT
T ss_pred CCCCCCEEEEeC-CCCCCCCEEEeEchhhccCCCCCEEEEEecC
Confidence 499999999997 45699999997643211 112456677773
No 348
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=25.25 E-value=20 Score=26.75 Aligned_cols=21 Identities=14% Similarity=-0.034 Sum_probs=17.0
Q ss_pred CCCceEEEEEEEee--eeeceec
Q 013949 412 KPGVYFKECCLIIC--YLTFVPF 432 (433)
Q Consensus 412 ~~gl~~~v~w~~~~--~~~~~p~ 432 (433)
...+.|.|.|+++. ..+|+|.
T Consensus 13 ~g~~~YlVKWkGy~~~~~TWEp~ 35 (64)
T 3mts_A 13 REQEYYLVKWRGYPDSESTWEPR 35 (64)
T ss_dssp SSCEEEEEEETTSCGGGCEEEEG
T ss_pred CCeEEEEEEEecCCCcCCcEeEH
Confidence 34689999999984 4799985
No 349
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=25.21 E-value=20 Score=29.24 Aligned_cols=28 Identities=14% Similarity=0.011 Sum_probs=23.2
Q ss_pred CCEEEeeCCEEEEEeCCCCccEEEEEEEE
Q 013949 131 DGCLYNLGDDAYVKAEEGAVDYIARIVEL 159 (433)
Q Consensus 131 dG~~Y~vGD~VyV~~~~~~p~yIgrI~ei 159 (433)
+|..|.+||.|..+-. +-|+|-|+|...
T Consensus 5 ~g~~~~~GdlVwaK~~-g~p~WPa~V~~~ 32 (110)
T 2daq_A 5 SSGKLHYKQIVWVKLG-NYRWWPAEICNP 32 (110)
T ss_dssp CCCSCCSSEEEEEECS-SSCEEEEEECCT
T ss_pred CCCCCCCCCEEEEEeC-CCCCCceeeCCh
Confidence 5677899999999974 468999999865
No 350
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=24.77 E-value=73 Score=29.51 Aligned_cols=48 Identities=17% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCCcEEecccchhHHHHhHhh--hhhcCCCeEeeEEEeecCHhhHHHHHHc
Q 013949 279 PEMSLLDLYSGCGAMSTGLCI--GASLSGVKLVTRWAIDINPHACKSLKFN 327 (433)
Q Consensus 279 ~~l~~lDLFsG~GG~s~Gl~~--ga~~aG~~~~t~~avD~d~~A~~t~~~N 327 (433)
...++||+=||.|.++.-+.. +....++.+ ...++|.++.+++..+.+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v-~~~~vD~S~~ml~~a~~~ 101 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKEL 101 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEE-EEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCcee-eEEEEeCCHHHHHHHHHH
Confidence 456999999999987754311 111234542 247999999988877765
No 351
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.56 E-value=75 Score=32.35 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=39.6
Q ss_pred ccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhHH
Q 013949 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 342 (433)
Q Consensus 287 FsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~~ 342 (433)
-+|+|-+...+..-+...|.++ ..+|.|+.+++.+..++ +..++++|..+..
T Consensus 8 I~G~G~vG~~la~~L~~~~~~v---~vId~d~~~~~~~~~~~-~~~~i~Gd~~~~~ 59 (461)
T 4g65_A 8 ILGAGQVGGTLAENLVGENNDI---TIVDKDGDRLRELQDKY-DLRVVNGHASHPD 59 (461)
T ss_dssp EECCSHHHHHHHHHTCSTTEEE---EEEESCHHHHHHHHHHS-SCEEEESCTTCHH
T ss_pred EECCCHHHHHHHHHHHHCCCCE---EEEECCHHHHHHHHHhc-CcEEEEEcCCCHH
Confidence 6888877766654445568885 59999999999988877 4678899987543
No 352
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.75 E-value=1.1e+02 Score=27.13 Aligned_cols=55 Identities=15% Similarity=0.060 Sum_probs=39.8
Q ss_pred EecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 284 lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+=+.-|.||+...++..+...|.++ .+++.++...+......++..++..|+.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~ 64 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASGAKV---VAVTRTNSDLVSLAKECPGIEPVCVDLGDW 64 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHSTTCEEEECCTTCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHhccCCCcEEecCCCH
Confidence 3356677899888877777789885 578888877666665566666677787654
No 353
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=22.81 E-value=48 Score=27.78 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=33.4
Q ss_pred ccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhh
Q 013949 287 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 340 (433)
Q Consensus 287 FsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d 340 (433)
..|+|.+...+...+...|+++ .++|.++..++.++.. .+..++..|..+
T Consensus 24 IiG~G~iG~~la~~L~~~g~~V---~vid~~~~~~~~~~~~-~g~~~~~~d~~~ 73 (155)
T 2g1u_A 24 IFGCGRLGSLIANLASSSGHSV---VVVDKNEYAFHRLNSE-FSGFTVVGDAAE 73 (155)
T ss_dssp EECCSHHHHHHHHHHHHTTCEE---EEEESCGGGGGGSCTT-CCSEEEESCTTS
T ss_pred EECCCHHHHHHHHHHHhCCCeE---EEEECCHHHHHHHHhc-CCCcEEEecCCC
Confidence 4588988887766667789874 5889988776655422 234456666544
No 354
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.72 E-value=1.1e+02 Score=26.97 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=39.2
Q ss_pred EecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 284 lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+=+.-|.||+...+...+...|.++ .+++.++...+......+...++..|+.+.
T Consensus 10 vlITGasggiG~~~a~~l~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~ 64 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHATGARV---VAVSRTQADLDSLVRECPGIEPVCVDLGDW 64 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHSTTCEEEECCTTCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHHcCCCCEEEEeCCCH
Confidence 3355667898888877667789885 578888877766666556666677787654
No 355
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=22.44 E-value=67 Score=28.78 Aligned_cols=49 Identities=10% Similarity=-0.017 Sum_probs=34.0
Q ss_pred cccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 286 LYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 286 LFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+.+|+|-+...+...+...|+ + .++|.|+..++.+. ++..++.+|+.+.
T Consensus 13 iI~G~G~~G~~la~~L~~~g~-v---~vid~~~~~~~~~~---~~~~~i~gd~~~~ 61 (234)
T 2aef_A 13 VICGWSESTLECLRELRGSEV-F---VLAEDENVRKKVLR---SGANFVHGDPTRV 61 (234)
T ss_dssp EEESCCHHHHHHHHHSTTSEE-E---EEESCGGGHHHHHH---TTCEEEESCTTCH
T ss_pred EEECCChHHHHHHHHHHhCCe-E---EEEECCHHHHHHHh---cCCeEEEcCCCCH
Confidence 456888776666444455676 5 48899998887776 4567788887643
No 356
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=22.36 E-value=1.1e+02 Score=24.12 Aligned_cols=38 Identities=5% Similarity=0.198 Sum_probs=29.0
Q ss_pred EEEeeCCEEEEEeCCCCccEEEEEEEEeecCCCceEEEEEEee
Q 013949 133 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFY 175 (433)
Q Consensus 133 ~~Y~vGD~VyV~~~~~~p~yIgrI~ei~e~~dg~~~v~VrWFy 175 (433)
..|.+||-|+-+=+++ -+|-|+|.++-.+ ..+.|.++-
T Consensus 20 ~~f~vGd~VlArW~D~-~yYPAkI~sV~~~----~~YtV~F~D 57 (85)
T 3qii_A 20 SEFQINEQVLACWSDC-RFYPAKVTAVNKD----GTYTVKFYD 57 (85)
T ss_dssp -CCCTTCEEEEECTTS-CEEEEEEEEECTT----SEEEEEETT
T ss_pred cccccCCEEEEEeCCC-CEeeEEEEEECCC----CeEEEEEeC
Confidence 6799999999998544 6899999998653 347777654
No 357
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=20.52 E-value=1.1e+02 Score=28.57 Aligned_cols=35 Identities=26% Similarity=0.418 Sum_probs=27.6
Q ss_pred chhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHH
Q 013949 289 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF 326 (433)
Q Consensus 289 G~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~ 326 (433)
|+|.|..++...+..+|+++ ..+|.++.+.+....
T Consensus 11 GaG~mG~~iA~~la~~G~~V---~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 11 GTGVLGSQIAFQTAFHGFAV---TAYDINTDALDAAKK 45 (283)
T ss_dssp CCSHHHHHHHHHHHHTTCEE---EEECSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCeE---EEEeCCHHHHHHHHH
Confidence 99999998877777899985 578999877665544
No 358
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.47 E-value=1.8e+02 Score=25.52 Aligned_cols=55 Identities=4% Similarity=-0.058 Sum_probs=39.9
Q ss_pred EecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 284 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 284 lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
+=+..|.||+...++..+...|+++ .+++.++...+......+...++..|+.+.
T Consensus 8 vlVtGasggiG~~~a~~l~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~ 62 (234)
T 2ehd_A 8 VLITGASRGIGEATARLLHAKGYRV---GLMARDEKRLQALAAELEGALPLPGDVREE 62 (234)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHSTTCEEEECCTTCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEE---EEEECCHHHHHHHHHHhhhceEEEecCCCH
Confidence 3366778898888877777789885 578888877766666555666777787643
No 359
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=20.46 E-value=1.1e+02 Score=28.04 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=40.3
Q ss_pred EEecccchhHHHHhHhhhhhcCCCeEeeEEEeecCHhhHHHHHHcCCCCceeecChhhH
Q 013949 283 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 341 (433)
Q Consensus 283 ~lDLFsG~GG~s~Gl~~ga~~aG~~~~t~~avD~d~~A~~t~~~N~p~~~v~~~di~d~ 341 (433)
++=+.-|.||+...++..+...|.++ ..++.++...+......+...++..|+.+.
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V---~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~ 66 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARV---VICDKDESGGRALEQELPGAVFILCDVTQE 66 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHCTTEEEEECCTTSH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEE---EEEeCCHHHHHHHHHHhcCCeEEEcCCCCH
Confidence 33355677888888877777789885 578899887777666666566677787543
Done!